BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037010
(589 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4EBY|A Chain A, Crystal Structure Of The Ectodomain Of A Receptor Like
Kinase
pdb|4EBZ|A Chain A, Crystal Structure Of The Ectodomain Of A Receptor Like
Kinase
Length = 212
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 136/206 (66%)
Query: 25 CTKGCDTALASYYVWIGSNLTFIAQTLRSSLVDPNDVELTTILSYNKQLSNKDSLLADTR 84
C C ALASYY+ G+ L+ I Q L SS+ + + IL YN + +KD + +R
Sbjct: 1 CRTSCPLALASYYLENGTTLSVINQNLNSSIAPYDQINFDPILRYNSNIKDKDRIQMGSR 60
Query: 85 INVPFPCDCINGEFLGHTFQFSINSGDTYEKVATRYYSNLTDAASLQRINNYPPTRIPDR 144
+ VPFPC+C G+FLGH F +S+ DTYE+VA Y+NLT SLQ N +P T IP
Sbjct: 61 VLVPFPCECQPGDFLGHNFSYSVRQEDTYERVAISNYANLTTMESLQARNPFPATNIPLS 120
Query: 145 GTLNVTVNCSCGDADVSKQYRLFVTYPLRPGDSLQSIARNVGLSESLLQNYNPGVNFTRG 204
TLNV VNCSCGD VSK + LFVTYPLRP DSL SIAR+ G+S +LQ YNPGVNF G
Sbjct: 121 ATLNVLVNCSCGDESVSKDFGLFVTYPLRPEDSLSSIARSSGVSADILQRYNPGVNFNSG 180
Query: 205 SGLVFIPGRDANGVFPALESSSTGGL 230
+G+V++PGRD NG FP +SS G+
Sbjct: 181 NGIVYVPGRDPNGAFPPFKSSKQDGV 206
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/315 (36%), Positives = 167/315 (53%), Gaps = 21/315 (6%)
Query: 262 FSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMD 321
FS EL A+DNFS + +G+GGFG VY RL L+ K ++
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKG------------RLADGTLVAVKRLKEERX 75
Query: 322 MQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRG--SGRDP 378
+F E+++++ H NL+RL G+C+ + LVY Y+ NG+++ LR + P
Sbjct: 76 QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP 135
Query: 379 LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVG 438
L W R +IAL SARGL Y+H+H P IHRD+K+ANIL+D+ F A V DFGL KL +
Sbjct: 136 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 195
Query: 439 SASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKG 498
+ + GT G++ PEY G S K DV+ +GV+L ELI+ + A ++ D
Sbjct: 196 DXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 255
Query: 499 LVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIV 558
L+ + +L + L LVD L N + V ++ Q+A +CTQ P RP M +V
Sbjct: 256 LLDWVKGLLK----EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 311
Query: 559 VALM--TLSSTTEDW 571
L L+ E+W
Sbjct: 312 RMLEGDGLAERWEEW 326
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 170/319 (53%), Gaps = 29/319 (9%)
Query: 262 FSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMD 321
FS EL A+DNF + +G+GGFG VY +G + L A+K++
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVY----KGRLADGXL------------VAVKRLK 63
Query: 322 MQASR----EFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRG--S 374
+ ++ +F E+++++ H NL+RL G+C+ + LVY Y+ NG+++ LR
Sbjct: 64 EERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE 123
Query: 375 GRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL 434
+ PL W R +IAL SARGL Y+H+H P IHRD+K+ANIL+D+ F A V DFGL KL
Sbjct: 124 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183
Query: 435 TEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSA 494
+ + + G G++ PEY G S K DV+ +GV+L ELI+ + A ++
Sbjct: 184 MDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND 243
Query: 495 DSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSM 554
D V L + V L + L LVD L N + V ++ Q+A +CTQ P RP M
Sbjct: 244 DD---VMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299
Query: 555 RSIVVALM--TLSSTTEDW 571
+V L L+ E+W
Sbjct: 300 SEVVRMLEGDGLAERWEEW 318
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 167/309 (54%), Gaps = 44/309 (14%)
Query: 266 ELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS 325
+L +AT+NF IG G FG VY LR K A+K+ ++S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDG----------------AKVALKRRTPESS 76
Query: 326 R---EFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRD--PL 379
+ EF E++ L+ H +LV LIG+C E + L+Y+Y+ENGNL HL GS +
Sbjct: 77 QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSM 136
Query: 380 PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL-TEVG 438
W R++I + +ARGL Y+H + IHRD+KS NIL+D+NF K+ DFG++K TE+G
Sbjct: 137 SWEQRLEICIGAARGLHYLHTRAI---IHRDVKSINILLDENFVPKITDFGISKKGTELG 193
Query: 439 SASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKG 498
L + GT GY+ PEY G ++ K DVY+FGVVL+E++ A+ AIV+
Sbjct: 194 QTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ---------- 243
Query: 499 LVALFEEVLNLPD-PIE-----DLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRP 552
+L E++NL + +E L ++VDP L D +S+ K A C + RP
Sbjct: 244 --SLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRP 301
Query: 553 SMRSIVVAL 561
SM ++ L
Sbjct: 302 SMGDVLWKL 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/309 (36%), Positives = 166/309 (53%), Gaps = 44/309 (14%)
Query: 266 ELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS 325
+L +AT+NF IG G FG VY LR K A+K+ ++S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDG----------------AKVALKRRTPESS 76
Query: 326 R---EFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRD--PL 379
+ EF E++ L+ H +LV LIG+C E + L+Y+Y+ENGNL HL GS +
Sbjct: 77 QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSM 136
Query: 380 PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL-TEVG 438
W R++I + +ARGL Y+H + IHRD+KS NIL+D+NF K+ DFG++K TE+
Sbjct: 137 SWEQRLEICIGAARGLHYLHTRAI---IHRDVKSINILLDENFVPKITDFGISKKGTELD 193
Query: 439 SASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKG 498
L + GT GY+ PEY G ++ K DVY+FGVVL+E++ A+ AIV+
Sbjct: 194 QTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ---------- 243
Query: 499 LVALFEEVLNLPD-PIE-----DLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRP 552
+L E++NL + +E L ++VDP L D +S+ K A C + RP
Sbjct: 244 --SLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRP 301
Query: 553 SMRSIVVAL 561
SM ++ L
Sbjct: 302 SMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 168/315 (53%), Gaps = 31/315 (9%)
Query: 262 FSYEELSKATDNFSM------SHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA 315
FS+ EL T+NF +K+G+GGFG VY +G N+ + V L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVY----KGYVNNT----TVAVKKLAAMV 66
Query: 316 AIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRG- 373
I +++ ++F E+KV+ H NLV L+G+ +G L LVY Y+ NG+L + L
Sbjct: 67 DITTEELK--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 374 SGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
G PL W R +IA +A G+ ++HE+ +IHRDIKSANIL+D+ F AK++DFGL +
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLAR 181
Query: 434 LTE-VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
+E + +R+VGT YM PE A G+++PK D+Y+FGVVL E+I+ A+
Sbjct: 182 ASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAV------ 234
Query: 493 SADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRP 552
+ + L + + D + + +D ++ D SV M +A C E RP
Sbjct: 235 -DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRP 292
Query: 553 SMRSIVVALMTLSST 567
++ + L ++++
Sbjct: 293 DIKKVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 167/315 (53%), Gaps = 31/315 (9%)
Query: 262 FSYEELSKATDNFSM------SHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA 315
FS+ EL T+NF +K+G+GGFG VY +G N+ + V L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVY----KGYVNNT----TVAVKKLAAMV 66
Query: 316 AIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRG- 373
I +++ ++F E+KV+ H NLV L+G+ +G L LVY Y+ NG+L + L
Sbjct: 67 DITTEELK--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 374 SGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
G PL W R +IA +A G+ ++HE+ +IHRDIKSANIL+D+ F AK++DFGL +
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLAR 181
Query: 434 LTE-VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
+E + R+VGT YM PE A G+++PK D+Y+FGVVL E+I+ A+
Sbjct: 182 ASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAV------ 234
Query: 493 SADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRP 552
+ + L + + D + + +D ++ D SV M +A C E RP
Sbjct: 235 -DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRP 292
Query: 553 SMRSIVVALMTLSST 567
++ + L ++++
Sbjct: 293 DIKKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 167/315 (53%), Gaps = 31/315 (9%)
Query: 262 FSYEELSKATDNFSM------SHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA 315
FS+ EL T+NF +K+G+GGFG VY +G N+ + V L
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVY----KGYVNNT----TVAVKKLAAMV 60
Query: 316 AIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRG- 373
I +++ ++F E+KV+ H NLV L+G+ +G L LVY Y+ NG+L + L
Sbjct: 61 DITTEELK--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 118
Query: 374 SGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
G PL W R +IA +A G+ ++HE+ +IHRDIKSANIL+D+ F AK++DFGL +
Sbjct: 119 DGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLAR 175
Query: 434 LTE-VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
+E + R+VGT YM PE A G+++PK D+Y+FGVVL E+I+ A+
Sbjct: 176 ASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAV------ 228
Query: 493 SADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRP 552
+ + L + + D + + +D ++ D SV M +A C E RP
Sbjct: 229 -DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRP 286
Query: 553 SMRSIVVALMTLSST 567
++ + L ++++
Sbjct: 287 DIKKVQQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 133/234 (56%), Gaps = 23/234 (9%)
Query: 262 FSYEELSKATDNFSM------SHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA 315
FS+ EL T+NF +K G+GGFG VY +G N+ + V L
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVY----KGYVNNT----TVAVKKLAAMV 57
Query: 316 AIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRG- 373
I +++ ++F E+KV H NLV L+G+ +G L LVY Y NG+L + L
Sbjct: 58 DITTEELK--QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCL 115
Query: 374 SGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
G PL W R +IA +A G+ ++HE+ +IHRDIKSANIL+D+ F AK++DFGL +
Sbjct: 116 DGTPPLSWHXRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLAR 172
Query: 434 LTE-VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAI 486
+E +R+VGT Y PE A G+++PK D+Y+FGVVL E+I+ A+
Sbjct: 173 ASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAV 225
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 148/297 (49%), Gaps = 43/297 (14%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR--EFLA 330
+ ++ KIG G FG V+ AE G + V +LM++ D A R EFL
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSD--------VAVKILMEQ------DFHAERVNEFLR 83
Query: 331 ELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSG-RDPLPWSSRVQIA 388
E+ ++ + H N+V +G + +L +V EY+ G+L L SG R+ L R+ +A
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL-V 447
D A+G+ Y+H P+ +HRD+KS N+L+DK + KV DFGL++L S L ++
Sbjct: 144 YDVAKGMNYLHNRNPPI-VHRDLKSPNLLVDKKYTVKVCDFGLSRLK--ASXFLXSKXAA 200
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
GT +M PE + + K DVY+FGV+L+EL + ++ GN + A V + L
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW--GNLNPAQVVAAVGFKCKRL 258
Query: 508 NLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
+P + ++P ++A + + C P RPS +I+ L L
Sbjct: 259 EIP-------RNLNP------------QVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 148/297 (49%), Gaps = 43/297 (14%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR--EFLA 330
+ ++ KIG G FG V+ AE G + V +LM++ D A R EFL
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSD--------VAVKILMEQ------DFHAERVNEFLR 83
Query: 331 ELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSG-RDPLPWSSRVQIA 388
E+ ++ + H N+V +G + +L +V EY+ G+L L SG R+ L R+ +A
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR-LV 447
D A+G+ Y+H P+ +HR++KS N+L+DK + KV DFGL++L S L ++
Sbjct: 144 YDVAKGMNYLHNRNPPI-VHRNLKSPNLLVDKKYTVKVCDFGLSRLK--ASTFLSSKSAA 200
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
GT +M PE + + K DVY+FGV+L+EL + ++ GN + A V + L
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW--GNLNPAQVVAAVGFKCKRL 258
Query: 508 NLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
+P + ++P ++A + + C P RPS +I+ L L
Sbjct: 259 EIP-------RNLNP------------QVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 138/307 (44%), Gaps = 51/307 (16%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDM 322
+E + + ++G G FG V+ G K A+K K
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGH----------------TKVAVKSLKQGS 49
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
+ FLAE ++ + H LVRL + ++++ EY+ENG+L + L+ L +
Sbjct: 50 MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 109
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
+ +A A G+ +I E YIHRD+++ANIL+ K+ADFGL +L E +
Sbjct: 110 KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 166
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVAL 502
+ PE YG + K DV++FG++L E+++ G
Sbjct: 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG------------- 213
Query: 503 FEEVLNLPDPIEDLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPS---MRS 556
+ P+ I++L ++V P DNCP + + QL ++C +E P+ RP+ +RS
Sbjct: 214 ----MTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRPTFDYLRS 262
Query: 557 IVVALMT 563
++ T
Sbjct: 263 VLEDFFT 269
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 48/310 (15%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDM 322
+E + + ++G G FG V+ G K A+K K
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGH----------------TKVAVKSLKQGS 49
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
+ FLAE ++ + H LVRL + ++++ EY+ENG+L + L+ L +
Sbjct: 50 MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 109
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
+ +A A G+ +I E YIHRD+++ANIL+ K+ADFGL +L E +
Sbjct: 110 KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 166
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVAL 502
+ PE YG + K DV++FG++L E+++ G
Sbjct: 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG------------- 213
Query: 503 FEEVLNLPDPIEDLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVV 559
+ P+ I++L ++V P DNCP + + QL ++C +E P+ RP+ +
Sbjct: 214 ----MTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRPTFDYLRS 262
Query: 560 ALMTLSSTTE 569
L + TE
Sbjct: 263 VLEDFFTATE 272
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 48/310 (15%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDM 322
+E + + ++G G FG V+ G K A+K K
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGH----------------TKVAVKSLKQGS 58
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
+ FLAE ++ + H LVRL + ++++ EY+ENG+L + L+ L +
Sbjct: 59 MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 118
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
+ +A A G+ +I E YIHRD+++ANIL+ K+ADFGL +L E +
Sbjct: 119 KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 175
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVAL 502
+ PE YG + K DV++FG++L E+++ G
Sbjct: 176 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG------------- 222
Query: 503 FEEVLNLPDPIEDLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVV 559
+ P+ I++L ++V P DNCP + + QL ++C +E P+ RP+ +
Sbjct: 223 ----MTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRPTFDYLRS 271
Query: 560 ALMTLSSTTE 569
L + TE
Sbjct: 272 VLEDFFTATE 281
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 138/307 (44%), Gaps = 51/307 (16%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDM 322
+E + + ++G G FG V+ G K A+K K
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGH----------------TKVAVKSLKQGS 51
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
+ FLAE ++ + H LVRL + ++++ EY+ENG+L + L+ L +
Sbjct: 52 MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 111
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
+ +A A G+ +I E YIHRD+++ANIL+ K+ADFGL +L E +
Sbjct: 112 KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 168
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVAL 502
+ PE YG + K DV++FG++L E+++ G
Sbjct: 169 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG------------- 215
Query: 503 FEEVLNLPDPIEDLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPS---MRS 556
+ P+ I++L ++V P DNCP + + QL ++C +E P+ RP+ +RS
Sbjct: 216 ----MTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRPTFDYLRS 264
Query: 557 IVVALMT 563
++ T
Sbjct: 265 VLEDFFT 271
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 48/310 (15%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDM 322
+E + + ++G G FG V+ G K A+K K
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGH----------------TKVAVKSLKQGS 57
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
+ FLAE ++ + H LVRL + ++++ EY+ENG+L + L+ L +
Sbjct: 58 MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 117
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
+ +A A G+ +I E YIHRD+++ANIL+ K+ADFGL +L E +
Sbjct: 118 KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 174
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVAL 502
+ PE YG + K DV++FG++L E+++ G
Sbjct: 175 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG------------- 221
Query: 503 FEEVLNLPDPIEDLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVV 559
+ P+ I++L ++V P DNCP + + QL ++C +E P+ RP+ +
Sbjct: 222 ----MTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRPTFDYLRS 270
Query: 560 ALMTLSSTTE 569
L + TE
Sbjct: 271 VLEDFFTATE 280
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 138/307 (44%), Gaps = 51/307 (16%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDM 322
+E + + ++G G FG V+ G K A+K K
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGH----------------TKVAVKSLKQGS 50
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
+ FLAE ++ + H LVRL + ++++ EY+ENG+L + L+ L +
Sbjct: 51 MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 110
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
+ +A A G+ +I E YIHRD+++ANIL+ K+ADFGL +L E +
Sbjct: 111 KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 167
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVAL 502
+ PE YG + K DV++FG++L E+++ G
Sbjct: 168 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG------------- 214
Query: 503 FEEVLNLPDPIEDLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPS---MRS 556
+ P+ I++L ++V P DNCP + + QL ++C +E P+ RP+ +RS
Sbjct: 215 ----MTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRPTFDYLRS 263
Query: 557 IVVALMT 563
++ T
Sbjct: 264 VLEDFFT 270
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 48/310 (15%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDM 322
+E + + ++G G FG V+ G K A+K K
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGH----------------TKVAVKSLKQGS 55
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
+ FLAE ++ + H LVRL + ++++ EY+ENG+L + L+ L +
Sbjct: 56 MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 115
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
+ +A A G+ +I E YIHRD+++ANIL+ K+ADFGL +L E +
Sbjct: 116 KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 172
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVAL 502
+ PE YG + K DV++FG++L E+++ G
Sbjct: 173 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG------------- 219
Query: 503 FEEVLNLPDPIEDLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVV 559
+ P+ I++L ++V P DNCP + + QL ++C +E P+ RP+ +
Sbjct: 220 ----MTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRPTFDYLRS 268
Query: 560 ALMTLSSTTE 569
L + TE
Sbjct: 269 VLEDFFTATE 278
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 48/310 (15%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDM 322
+E + + ++G G FG V+ G K A+K K
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGH----------------TKVAVKSLKQGS 54
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
+ FLAE ++ + H LVRL + ++++ EY+ENG+L + L+ L +
Sbjct: 55 MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 114
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
+ +A A G+ +I E YIHRD+++ANIL+ K+ADFGL +L E +
Sbjct: 115 KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 171
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVAL 502
+ PE YG + K DV++FG++L E+++ G
Sbjct: 172 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG------------- 218
Query: 503 FEEVLNLPDPIEDLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVV 559
+ P+ I++L ++V P DNCP + + QL ++C +E P+ RP+ +
Sbjct: 219 ----MTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRPTFDYLRS 267
Query: 560 ALMTLSSTTE 569
L + TE
Sbjct: 268 VLEDFFTATE 277
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 138/307 (44%), Gaps = 51/307 (16%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDM 322
+E + + ++G G FG V+ G K A+K K
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGH----------------TKVAVKSLKQGS 49
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
+ FLAE ++ + H LVRL + ++++ EY+ENG+L + L+ L +
Sbjct: 50 MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 109
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
+ +A A G+ +I E YIHRD+++ANIL+ K+ADFGL +L E +
Sbjct: 110 KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVAL 502
+ PE YG + K DV++FG++L E+++ G
Sbjct: 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG------------- 213
Query: 503 FEEVLNLPDPIEDLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPS---MRS 556
+ P+ I++L ++V P DNCP + + QL ++C +E P+ RP+ +RS
Sbjct: 214 ----MTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRPTFDYLRS 262
Query: 557 IVVALMT 563
++ T
Sbjct: 263 VLEDFFT 269
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 138/307 (44%), Gaps = 51/307 (16%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDM 322
+E + + ++G G FG V+ G K A+K K
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGH----------------TKVAVKSLKQGS 44
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
+ FLAE ++ + H LVRL + ++++ EY+ENG+L + L+ L +
Sbjct: 45 MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 104
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
+ +A A G+ +I E YIHRD+++ANIL+ K+ADFGL +L E +
Sbjct: 105 KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 161
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVAL 502
+ PE YG + K DV++FG++L E+++ G
Sbjct: 162 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG------------- 208
Query: 503 FEEVLNLPDPIEDLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPS---MRS 556
+ P+ I++L ++V P DNCP + + QL ++C +E P+ RP+ +RS
Sbjct: 209 ----MTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRPTFDYLRS 257
Query: 557 IVVALMT 563
++ T
Sbjct: 258 VLEDFFT 264
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 138/307 (44%), Gaps = 51/307 (16%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDM 322
+E + + ++G G FG V+ G K A+K K
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGH----------------TKVAVKSLKQGS 55
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
+ FLAE ++ + H LVRL + ++++ EY+ENG+L + L+ L +
Sbjct: 56 MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 115
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
+ +A A G+ +I E YIHRD+++ANIL+ K+ADFGL +L E +
Sbjct: 116 KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 172
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVAL 502
+ PE YG + K DV++FG++L E+++ G
Sbjct: 173 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG------------- 219
Query: 503 FEEVLNLPDPIEDLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPS---MRS 556
+ P+ I++L ++V P DNCP + + QL ++C +E P+ RP+ +RS
Sbjct: 220 ----MTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRPTFDYLRS 268
Query: 557 IVVALMT 563
++ T
Sbjct: 269 VLEDFFT 275
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 48/310 (15%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDM 322
+E + + ++G G FG V+ G K A+K K
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGH----------------TKVAVKSLKQGS 59
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
+ FLAE ++ + H LVRL + ++++ EY+ENG+L + L+ L +
Sbjct: 60 MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 119
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
+ +A A G+ +I E YIHRD+++ANIL+ K+ADFGL +L E +
Sbjct: 120 KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 176
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVAL 502
+ PE YG + K DV++FG++L E+++ G
Sbjct: 177 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG------------- 223
Query: 503 FEEVLNLPDPIEDLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVV 559
+ P+ I++L ++V P DNCP + + QL ++C +E P+ RP+ +
Sbjct: 224 ----MTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRPTFDYLRS 272
Query: 560 ALMTLSSTTE 569
L + TE
Sbjct: 273 VLEDFFTATE 282
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 38/303 (12%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 51
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 52 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 111
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L + +
Sbjct: 112 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 168
Query: 442 LPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVA 501
P + PE Y S K DV+AFGV+L+E+ + + G D +
Sbjct: 169 APAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----IDLSQVYE 224
Query: 502 LFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
L E+ + P + CP K+ +L + C Q P RPS I A
Sbjct: 225 LLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFAEIHQAF 267
Query: 562 MTL 564
T+
Sbjct: 268 ETM 270
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 38/303 (12%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 52
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 53 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 112
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L + +
Sbjct: 113 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
Query: 442 LPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVA 501
P + PE Y S K DV+AFGV+L+E+ + + G D +
Sbjct: 170 APAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----IDLSQVYE 225
Query: 502 LFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
L E+ + P + CP K+ +L + C Q P RPS I A
Sbjct: 226 LLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFAEIHQAF 268
Query: 562 MTL 564
T+
Sbjct: 269 ETM 271
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 137/306 (44%), Gaps = 51/306 (16%)
Query: 266 ELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQ 323
E + + ++G G FG V+ G K A+K K
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGH----------------TKVAVKSLKQGSM 46
Query: 324 ASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
+ FLAE ++ + H LVRL + ++++ EY+ENG+L + L+ L +
Sbjct: 47 SPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINK 106
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+ +A A G+ +I E YIHR++++ANIL+ K+ADFGL +L E +
Sbjct: 107 LLDMAAQIAEGMAFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 163
Query: 444 TRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALF 503
+ PE YG + K DV++FG++L E+++ G
Sbjct: 164 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-------------- 209
Query: 504 EEVLNLPDPIEDLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPS---MRSI 557
+ P+ I++L ++V P DNCP + + QL ++C +E P+ RP+ +RS+
Sbjct: 210 ---MTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRPTFDYLRSV 259
Query: 558 VVALMT 563
+ T
Sbjct: 260 LEDFFT 265
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 124/261 (47%), Gaps = 32/261 (12%)
Query: 314 KAAIK--KMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHL 371
K A+K K + FLAE ++ + H LVRL + ++++ EY+ENG+L + L
Sbjct: 39 KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL 98
Query: 372 RGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL 431
+ L + + +A A G+ +I E YIHRD+++ANIL+ K+ADFGL
Sbjct: 99 KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGL 155
Query: 432 TKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNG 491
+L E + + PE YG + K DV++FG++L E+++ G
Sbjct: 156 ARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG-- 213
Query: 492 SSADSKGLVALFEEVLNLPDPIEDLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
+ P+ I++L ++V P DNCP + + QL ++C +E P
Sbjct: 214 ---------------MTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERP 251
Query: 549 QLRPSMRSIVVALMTLSSTTE 569
+ RP+ + L + TE
Sbjct: 252 EDRPTFDYLRSVLEDFFTATE 272
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 134/299 (44%), Gaps = 50/299 (16%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
+ +M HK+G G FG VY G + L+ + V L K D EFL E
Sbjct: 12 DITMKHKLGGGQFGEVY----EGVWKKYSLT--VAVKTL-------KEDTMEVEEFLKEA 58
Query: 333 KVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
V+ + H NLV+L+G C E +++ E++ GNL ++LR R + + +A
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------TEVGSASLPTR 445
+ +EY+ + +IHRD+ + N L+ +N KVADFGL++L T A P +
Sbjct: 119 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 175
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
+ PE Y S K DV+AFGV+L+E+ + + G D + L E+
Sbjct: 176 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----IDPSQVYELLEK 225
Query: 506 VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
+ P + CP K+ +L + C Q P RPS I A T+
Sbjct: 226 DYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 55
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 56 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA 115
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L T
Sbjct: 116 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 173 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 222
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 223 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 265
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 266 EIHQAFETM 274
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 50
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 51 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA 110
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L T
Sbjct: 111 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 168 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 217
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 218 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 260
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 261 EIHQAFETM 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 50
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 51 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA 110
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L T
Sbjct: 111 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 168 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 217
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 218 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 260
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 261 EIHQAFETM 269
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 55
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 56 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA 115
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L T
Sbjct: 116 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 173 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 222
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 223 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 265
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 266 EIHQAFETM 274
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 50
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 51 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA 110
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L T
Sbjct: 111 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 168 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 217
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 218 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 260
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 261 EIHQAFETM 269
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 55
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 56 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 115
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L T
Sbjct: 116 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT 172
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 173 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 222
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 223 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 265
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 266 EIHQAFETM 274
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 55
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 56 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 115
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L T
Sbjct: 116 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 173 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 222
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 223 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 265
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 266 EIHQAFETM 274
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 50
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 51 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA 110
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L T
Sbjct: 111 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 168 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 217
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 218 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 260
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 261 EIHQAFETM 269
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 51
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 52 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA 111
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L T
Sbjct: 112 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT 168
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 169 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 218
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 219 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 261
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 262 EIHQAFETM 270
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 50
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 51 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 110
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L T
Sbjct: 111 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 168 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 217
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 218 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 260
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 261 EIHQAFETM 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 55
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 56 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 115
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L T
Sbjct: 116 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 172
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 173 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 222
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 223 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 265
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 266 EIHQAFETM 274
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 54
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 55 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 114
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L T
Sbjct: 115 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 171
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 172 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 221
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 222 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 264
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 265 EIHQAFETM 273
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 50
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 51 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 110
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L T
Sbjct: 111 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 168 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 217
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 218 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 260
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 261 EIHQAFETM 269
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 63
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 64 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 123
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L T
Sbjct: 124 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 180
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 181 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 230
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 231 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 273
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 274 EIHQAFETM 282
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 52
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 53 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 112
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L T
Sbjct: 113 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 170 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 219
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 220 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 262
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 263 EIHQAFETM 271
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 134/299 (44%), Gaps = 50/299 (16%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
+ +M HK+G G +G VY G + L+ + V L K D EFL E
Sbjct: 12 DITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDTMEVEEFLKEA 58
Query: 333 KVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
V+ + H NLV+L+G C E +++ E++ GNL ++LR R + + +A
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------TEVGSASLPTR 445
+ +EY+ + +IHRD+ + N L+ +N KVADFGL++L T A P +
Sbjct: 119 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 175
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
+ PE Y S K DV+AFGV+L+E+ + + G D + L E+
Sbjct: 176 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----IDPSQVYELLEK 225
Query: 506 VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
+ P + CP K+ +L + C Q P RPS I A T+
Sbjct: 226 DYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY G + L+ + V L K D
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDT 52
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 53 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 112
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHRD+ + N L+ +N KVADFGL++L T
Sbjct: 113 VVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 170 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 219
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 220 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 262
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 263 EIHQAFETM 271
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 134/299 (44%), Gaps = 50/299 (16%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
+ +M HK+G G +G VY G + L+ + V L K D EFL E
Sbjct: 12 DITMKHKLGGGQYGEVY----EGVWKKYSLT--VAVKTL-------KEDTMEVEEFLKEA 58
Query: 333 KVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
V+ + H NLV+L+G C E +++ E++ GNL ++LR R + + +A
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------TEVGSASLPTR 445
+ +EY+ + +IHRD+ + N L+ +N KVADFGL++L T A P +
Sbjct: 119 SSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIK 175
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
+ PE Y S K DV+AFGV+L+E+ + + G D + L E+
Sbjct: 176 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----IDPSQVYELLEK 225
Query: 506 VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
+ P + CP K+ +L + C Q P RPS I A T+
Sbjct: 226 DYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY + S + V L K D
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTL-------KEDT 257
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 258 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA 317
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHR++ + N L+ +N KVADFGL++L T
Sbjct: 318 VVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 375 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 424
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 425 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 467
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 468 EIHQAFETM 476
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 148/320 (46%), Gaps = 59/320 (18%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS----REFLAELKVL 335
IG+G FG V A ++ + L AAIK+M AS R+F EL+VL
Sbjct: 23 IGEGNFGQVLKARIKK-------------DGLRMDAAIKRMKEYASKDDHRDFAGELEVL 69
Query: 336 THV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGS---GRDP-----------L 379
+ HH N++ L+G C G L+L EY +GNL + LR S DP L
Sbjct: 70 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 380 PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGS 439
+ A D ARG++Y+ + +IHRD+ + NIL+ +N+ AK+ADFGL++ EV
Sbjct: 130 SSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEVYV 186
Query: 440 ASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGL 499
RL +M E Y + DV+++GV+L+E++S G+
Sbjct: 187 KKTMGRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL-------GGTPYCGMTC 237
Query: 500 VALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVV 559
L+E+ LP L K PL+ ++ L + C +E P RPS I+V
Sbjct: 238 AELYEK---LPQGYR-LEK----------PLNCDDEVYDLMRQCWREKPYERPSFAQILV 283
Query: 560 ALMTLSSTTEDWDVGSFYEN 579
+L + + + + YE
Sbjct: 284 SLNRMLEERKTYVNTTLYEK 303
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 140/297 (47%), Gaps = 38/297 (12%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
++ +IG G FG VY + G+ + V +L A + +QA F E+
Sbjct: 13 QITVGQRIGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQ-QLQA---FKNEV 59
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
VL H+N++ +GY + L +V ++ E +L HL S + IA +A
Sbjct: 60 GVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTA 118
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP-TRLVGTFG 451
RG++Y+H ++ IHRD+KS NI + ++ K+ DFGL + S S +L G+
Sbjct: 119 RGMDYLHAKSI---IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 175
Query: 452 YMPPEYAQYGDVSP---KVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLN 508
+M PE + D +P + DVYAFG+VLYEL++ + + N ++ D E++
Sbjct: 176 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQ------IIEMVG 227
Query: 509 LPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLS 565
DL K+ NCP +M +L C ++ RPS I+ + L+
Sbjct: 228 RGSLSPDLSKVR-----SNCP----KRMKRLMAECLKKKRDERPSFPRILAEIEELA 275
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 148/320 (46%), Gaps = 59/320 (18%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS----REFLAELKVL 335
IG+G FG V A ++ + L AAIK+M AS R+F EL+VL
Sbjct: 33 IGEGNFGQVLKARIKKDG-------------LRMDAAIKRMKEYASKDDHRDFAGELEVL 79
Query: 336 THV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGS---GRDP-----------L 379
+ HH N++ L+G C G L+L EY +GNL + LR S DP L
Sbjct: 80 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 380 PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGS 439
+ A D ARG++Y+ + +IHRD+ + NIL+ +N+ AK+ADFGL++ EV
Sbjct: 140 SSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEVYV 196
Query: 440 ASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGL 499
RL +M E Y + DV+++GV+L+E++S G+
Sbjct: 197 KKTMGRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL-------GGTPYCGMTC 247
Query: 500 VALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVV 559
L+E+ LP L K PL+ ++ L + C +E P RPS I+V
Sbjct: 248 AELYEK---LPQGYR-LEK----------PLNCDDEVYDLMRQCWREKPYERPSFAQILV 293
Query: 560 ALMTLSSTTEDWDVGSFYEN 579
+L + + + + YE
Sbjct: 294 SLNRMLEERKTYVNTTLYEK 313
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 31/232 (13%)
Query: 255 TVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQK 314
TV EF + + IG+G FG V + RG K
Sbjct: 176 TVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRG-----------------NK 218
Query: 315 AAIKKMDMQASRE-FLAELKVLTHVHHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHL 371
A+K + A+ + FLAE V+T + H NLV+L+G VE G L++V EY+ G+L ++L
Sbjct: 219 VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL 278
Query: 372 RGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL 431
R GR L ++ +LD +EY+ + ++HRD+ + N+L+ ++ AKV+DFGL
Sbjct: 279 RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGL 335
Query: 432 TKL--TEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
TK + + LP + + PE + S K DV++FG++L+E+ S
Sbjct: 336 TKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY + S + V L K D
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTL-------KEDT 254
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 255 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 314
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHR++ + N L+ +N KVADFGL++L T
Sbjct: 315 VVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 371
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 372 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 421
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 422 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 464
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 465 EIHQAFETM 473
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 50/309 (16%)
Query: 263 SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
+Y++ + +M HK+G G +G VY + S + V L K D
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTL-------KEDT 296
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
EFL E V+ + H NLV+L+G C E +++ E++ GNL ++LR R +
Sbjct: 297 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 356
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------T 435
+ +A + +EY+ + +IHR++ + N L+ +N KVADFGL++L T
Sbjct: 357 VVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 413
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
A P + + PE Y S K DV+AFGV+L+E+ + + G D
Sbjct: 414 AHAGAKFPIK------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG----ID 463
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
+ L E+ + P + CP K+ +L + C Q P RPS
Sbjct: 464 LSQVYELLEKDYRMERP-------------EGCP----EKVYELMRACWQWNPSDRPSFA 506
Query: 556 SIVVALMTL 564
I A T+
Sbjct: 507 EIHQAFETM 515
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 31/207 (14%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-FLAELKVLTHV 338
IG+G FG V + RG K A+K + A+ + FLAE V+T +
Sbjct: 14 IGKGEFGDVMLGDYRG-----------------NKVAVKCIKNDATAQAFLAEASVMTQL 56
Query: 339 HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLE 396
H NLV+L+G VE G L++V EY+ G+L ++LR GR L ++ +LD +E
Sbjct: 57 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 116
Query: 397 YIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL--TEVGSASLPTRLVGTFGYMP 454
Y+ + ++HRD+ + N+L+ ++ AKV+DFGLTK + + LP + +
Sbjct: 117 YLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTA 167
Query: 455 PEYAQYGDVSPKVDVYAFGVVLYELIS 481
PE + S K DV++FG++L+E+ S
Sbjct: 168 PEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 133/299 (44%), Gaps = 50/299 (16%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
+ +M HK+G G +G VY + S + V L K D EFL E
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKK------YSLTVAVKTL-------KEDTMEVEEFLKEA 79
Query: 333 KVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
V+ + H NLV+L+G C +E ++V EY+ GNL ++LR R+ + + +A
Sbjct: 80 AVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQI 139
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------TEVGSASLPTR 445
+ +EY+ + +IHRD+ + N L+ +N KVADFGL++L T A P +
Sbjct: 140 SSAMEYLEKKN---FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIK 196
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
+ PE Y S K DV+AFGV+L+E+ + + G D + L E+
Sbjct: 197 ------WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG----IDLSQVYDLLEK 246
Query: 506 VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
+ P + CP K+ +L + C + P RPS A T+
Sbjct: 247 GYRMEQP-------------EGCP----PKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 31/207 (14%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-FLAELKVLTHV 338
IG+G FG V + RG K A+K + A+ + FLAE V+T +
Sbjct: 20 IGKGEFGDVMLGDYRG-----------------NKVAVKCIKNDATAQAFLAEASVMTQL 62
Query: 339 HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLE 396
H NLV+L+G VE G L++V EY+ G+L ++LR GR L ++ +LD +E
Sbjct: 63 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 122
Query: 397 YIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL--TEVGSASLPTRLVGTFGYMP 454
Y+ + ++HRD+ + N+L+ ++ AKV+DFGLTK + + LP + +
Sbjct: 123 YLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTA 173
Query: 455 PEYAQYGDVSPKVDVYAFGVVLYELIS 481
PE + S K DV++FG++L+E+ S
Sbjct: 174 PEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 31/207 (14%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-FLAELKVLTHV 338
IG+G FG V + RG K A+K + A+ + FLAE V+T +
Sbjct: 29 IGKGEFGDVMLGDYRG-----------------NKVAVKCIKNDATAQAFLAEASVMTQL 71
Query: 339 HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLE 396
H NLV+L+G VE G L++V EY+ G+L ++LR GR L ++ +LD +E
Sbjct: 72 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 131
Query: 397 YIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL--TEVGSASLPTRLVGTFGYMP 454
Y+ + ++HRD+ + N+L+ ++ AKV+DFGLTK + + LP + +
Sbjct: 132 YLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTA 182
Query: 455 PEYAQYGDVSPKVDVYAFGVVLYELIS 481
PE + S K DV++FG++L+E+ S
Sbjct: 183 PEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 140/302 (46%), Gaps = 48/302 (15%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
++ +IG G FG VY + G+ + V +L A + +QA F E+
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQ-QLQA---FKNEV 71
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
VL H+N++ +GY + L +V ++ E +L HL S + IA +A
Sbjct: 72 GVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTA 130
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL-TKLTEVGSASLPTRLVGTFG 451
RG++Y+H ++ IHRD+KS NI + ++ K+ DFGL T+ + + +L G+
Sbjct: 131 RGMDYLHAKSI---IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 452 YMPPEYAQYGDVSP---KVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLN 508
+M PE + D +P + DVYAFG+VLYEL++ + L +N
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ------------------LPYSNIN 229
Query: 509 LPDPIEDL--RKLVDPRLGD---NCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMT 563
D I ++ R + P L NCP +M +L C ++ RPS I+ +
Sbjct: 230 NRDQIIEMVGRGSLSPDLSKVRSNCP----KRMKRLMAECLKKKRDERPSFPRILAEIEE 285
Query: 564 LS 565
L+
Sbjct: 286 LA 287
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 148/319 (46%), Gaps = 59/319 (18%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS----REFLAELKVL 335
IG+G FG V A ++ + L AAIK+M AS R+F EL+VL
Sbjct: 30 IGEGNFGQVLKARIKKDG-------------LRMDAAIKRMKEYASKDDHRDFAGELEVL 76
Query: 336 THV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGS---GRDP-----------L 379
+ HH N++ L+G C G L+L EY +GNL + LR S DP L
Sbjct: 77 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 380 PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGS 439
+ A D ARG++Y+ + +IHR++ + NIL+ +N+ AK+ADFGL++ EV
Sbjct: 137 SSQQLLHFAADVARGMDYLSQKQ---FIHRNLAARNILVGENYVAKIADFGLSRGQEVYV 193
Query: 440 ASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGL 499
RL +M E Y + DV+++GV+L+E++S G+
Sbjct: 194 KKTMGRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL-------GGTPYCGMTC 244
Query: 500 VALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVV 559
L+E+ LP L K PL+ ++ L + C +E P RPS I+V
Sbjct: 245 AELYEK---LPQGYR-LEK----------PLNCDDEVYDLMRQCWREKPYERPSFAQILV 290
Query: 560 ALMTLSSTTEDWDVGSFYE 578
+L + + + + YE
Sbjct: 291 SLNRMLEERKTYVNTTLYE 309
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 139/302 (46%), Gaps = 48/302 (15%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
++ +IG G FG VY + G+ + V +L A + +QA F E+
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQ-QLQA---FKNEV 71
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
VL H+N++ +GY L +V ++ E +L HL S + IA +A
Sbjct: 72 GVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTA 130
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL-TKLTEVGSASLPTRLVGTFG 451
RG++Y+H ++ IHRD+KS NI + ++ K+ DFGL T+ + + +L G+
Sbjct: 131 RGMDYLHAKSI---IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 452 YMPPEYAQYGDVSP---KVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLN 508
+M PE + D +P + DVYAFG+VLYEL++ + L +N
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ------------------LPYSNIN 229
Query: 509 LPDPIEDL--RKLVDPRLGD---NCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMT 563
D I ++ R + P L NCP +M +L C ++ RPS I+ +
Sbjct: 230 NRDQIIEMVGRGSLSPDLSKVRSNCP----KRMKRLMAECLKKKRDERPSFPRILAEIEE 285
Query: 564 LS 565
L+
Sbjct: 286 LA 287
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 147/328 (44%), Gaps = 66/328 (20%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+N IG+G FG V+ A G + ++ V +L ++A+ DMQA +F E
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFT-MVAVKMLKEEASA---DMQA--DFQRE 100
Query: 332 LKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRG----------------- 373
++ + N+V+L+G C G + L++EY+ G+L+E LR
Sbjct: 101 AALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTR 160
Query: 374 -----SGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVAD 428
G PL + ++ IA A G+ Y+ E ++HRD+ + N L+ +N K+AD
Sbjct: 161 ARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIAD 217
Query: 429 FGLTK-------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
FGL++ G+ ++P R +MPPE Y + + DV+A+GVVL+E+ S
Sbjct: 218 FGLSRNIYSADYYKADGNDAIPIR------WMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
Query: 482 AKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAK 541
G EEV+ + D L P +NCPL+ + L +
Sbjct: 272 YGLQPYYGMAH-----------EEVIYY---VRDGNILACP---ENCPLE----LYNLMR 310
Query: 542 VCTQEYPQLRPSMRSIVVALMTLSSTTE 569
+C + P RPS SI L + E
Sbjct: 311 LCWSKLPADRPSFCSIHRILQRMCERAE 338
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 153/358 (42%), Gaps = 75/358 (20%)
Query: 240 STGPAAGTPTSLNAITVDKSVEFSYEELSK-ATDNFSMSHKIGQGGFGAVYYAELRGEYG 298
S P G + L ++ FS + + + ++G+G FG V+ AE
Sbjct: 8 SLSPTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAE------ 61
Query: 299 NSYLSRLICVNLLMQK-------AAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCV 351
C NLL ++ A+K+ A ++F E ++LT + H ++VR G C
Sbjct: 62 --------CHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT 113
Query: 352 EGS-LFLVYEYIENGNLSEHLRGSGRD-------------PLPWSSRVQIALDSARGLEY 397
EG L +V+EY+ +G+L+ LR G D PL + +A A G+ Y
Sbjct: 114 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVY 173
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL------TKLTEVGSAS-LPTRLVGTF 450
+ ++HRD+ + N L+ + K+ DFG+ T VG + LP R
Sbjct: 174 L---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR----- 225
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELIS-AKEAIVKGNGSSADSKGLVALFEEVLNL 509
+MPPE Y + + DV++FGVVL+E+ + K+ + + + A
Sbjct: 226 -WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-------------- 270
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSST 567
D I R+L PR CP + M + C Q PQ R S++ + L L+
Sbjct: 271 -DCITQGRELERPR---ACPPEVYAIM----RGCWQREPQQRHSIKDVHARLQALAQA 320
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 155/333 (46%), Gaps = 62/333 (18%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E A + +MS ++GQG FG VY +G + +R+ K + M+
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAI------KTVNEAASMRE 56
Query: 325 SREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRD------ 377
EFL E V+ + ++VRL+G +G ++ E + G+L +LR +
Sbjct: 57 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 116
Query: 378 --PLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
P S +Q+A + A G+ Y++ + ++HRD+ + N ++ ++F K+ DFG+T+
Sbjct: 117 LAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 173
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ G LP R +M PE + G + DV++FGVVL+E+ + E +
Sbjct: 174 XETDXXRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 227
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G + E+VL + + L P DNCP D +L +L ++C Q P
Sbjct: 228 GLSN-----------EQVLRF---VMEGGLLDKP---DNCP-DMLL---ELMRMCWQYNP 266
Query: 549 QLRPSMRSIVVALMTLSSTTEDWDVG----SFY 577
++RPS I+ SS E+ + G SFY
Sbjct: 267 KMRPSFLEII------SSIKEEMEPGFREVSFY 293
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 147/323 (45%), Gaps = 72/323 (22%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNL-------LMQKAAIKKMDMQAS 325
N + ++G+G FG V+ AE C NL L+ +K A
Sbjct: 14 NIVLKRELGEGAFGKVFLAE--------------CYNLCPEQDKILVAVKTLKDASDNAR 59
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDP------ 378
++F E ++LT++ H ++V+ G CVEG L +V+EY+++G+L++ LR G D
Sbjct: 60 KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEG 119
Query: 379 -----LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL-- 431
L S + IA A G+ Y+ ++HRD+ + N L+ +N K+ DFG+
Sbjct: 120 NPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSR 176
Query: 432 ----TKLTEVGSAS-LPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS-AKEA 485
T VG + LP R +MPPE Y + + DV++ GVVL+E+ + K+
Sbjct: 177 DVYSTDYYRVGGHTMLPIR------WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
Query: 486 IVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQ 545
+ + + EV+ + I R L PR CP + + +L C Q
Sbjct: 231 WYQLSNN------------EVI---ECITQGRVLQRPR---TCPQE----VYELMLGCWQ 268
Query: 546 EYPQLRPSMRSIVVALMTLSSTT 568
P +R +++ I L L+ +
Sbjct: 269 REPHMRKNIKGIHTLLQNLAKAS 291
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 74/324 (22%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQK-------AAIKKMDMQAS 325
+ + ++G+G FG V+ AE C NLL ++ A+K+ A
Sbjct: 13 DIVLKWELGEGAFGKVFLAE--------------CHNLLPEQDKMLVAVKALKEASESAR 58
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRD------- 377
++F E ++LT + H ++VR G C EG L +V+EY+ +G+L+ LR G D
Sbjct: 59 QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 118
Query: 378 ------PLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL 431
PL + +A A G+ Y+ ++HRD+ + N L+ + K+ DFG+
Sbjct: 119 EDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM 175
Query: 432 ------TKLTEVGSAS-LPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS-AK 483
T VG + LP R +MPPE Y + + DV++FGVVL+E+ + K
Sbjct: 176 SRDIYSTDYYRVGGRTMLPIR------WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 229
Query: 484 EAIVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVC 543
+ + + + A D I R+L PR CP + M + C
Sbjct: 230 QPWYQLSNTEAI---------------DCITQGRELERPR---ACPPEVYAIM----RGC 267
Query: 544 TQEYPQLRPSMRSIVVALMTLSST 567
Q PQ R S++ + L L+
Sbjct: 268 WQREPQQRHSIKDVHARLQALAQA 291
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 131/301 (43%), Gaps = 44/301 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + ++G G FG V+ G K AIK K + FL
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGN----------------TKVAIKTLKPGTMSPESFL 52
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLR-GSGRDPLPWSSRVQIA 388
E +++ + H LV+L E +++V EY+ G+L + L+ G GR L + V +A
Sbjct: 53 EEAQIMKKLKHDKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGR-ALKLPNLVDMA 111
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
A G+ YI YIHRD++SANIL+ K+ADFGL +L E +
Sbjct: 112 AQVAAGMAYIERMN---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF 168
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLN 508
+ PE A YG + K DV++FG++L EL++ G +++ ++ E
Sbjct: 169 PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG----MNNREVLEQVERGYR 224
Query: 509 LPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTT 568
+P CP D + + +L C ++ P+ RP+ + L + T
Sbjct: 225 MP-----------------CPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTAT 267
Query: 569 E 569
E
Sbjct: 268 E 268
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 144/327 (44%), Gaps = 80/327 (24%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQK-------AAIKKMDMQAS 325
+ + ++G+G FG V+ AE C NLL ++ A+K+ A
Sbjct: 19 DIVLKWELGEGAFGKVFLAE--------------CHNLLPEQDKMLVAVKALKEASESAR 64
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRD------- 377
++F E ++LT + H ++VR G C EG L +V+EY+ +G+L+ LR G D
Sbjct: 65 QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 124
Query: 378 ------PLPWSSRVQIALDSARGLEY---IHEHTVPVYIHRDIKSANILIDKNFHAKVAD 428
PL + +A A G+ Y +H ++HRD+ + N L+ + K+ D
Sbjct: 125 EDVAPGPLGLGQLLAVASQVAAGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGD 178
Query: 429 FGL------TKLTEVGSAS-LPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
FG+ T VG + LP R +MPPE Y + + DV++FGVVL+E+ +
Sbjct: 179 FGMSRDIYSTDYYRVGGRTMLPIR------WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
Query: 482 -AKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLA 540
K+ + + + A D I R+L PR CP + M
Sbjct: 233 YGKQPWYQLSNTEAI---------------DCITQGRELERPR---ACPPEVYAIM---- 270
Query: 541 KVCTQEYPQLRPSMRSIVVALMTLSST 567
+ C Q PQ R S++ + L L+
Sbjct: 271 RGCWQREPQQRHSIKDVHARLQALAQA 297
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 130/300 (43%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 310
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G+L + L+G L V +A
Sbjct: 311 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 370
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 371 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 427
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + G + EVL
Sbjct: 428 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVNREVL-- 474
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 475 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 130/300 (43%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 227
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G+L + L+G L V +A
Sbjct: 228 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 288 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + G + EVL
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVNREVL-- 391
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 392 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 227
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G+L + L+G L V +A
Sbjct: 228 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 288 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + KG G+V EVL
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGR---VPYPGMVN--REVL-- 391
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 392 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 158/336 (47%), Gaps = 62/336 (18%)
Query: 262 FSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMD 321
F +E A + +MS ++GQG FG VY +G + +R + + + + A+
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS----- 59
Query: 322 MQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRD--- 377
M+ EFL E V+ + ++VRL+G +G ++ E + G+L +LR +
Sbjct: 60 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 119
Query: 378 -----PLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT 432
P S +Q+A + A G+ Y++ + ++HRD+ + N ++ ++F K+ DFG+T
Sbjct: 120 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 176
Query: 433 K-------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEA 485
+ + G LP R +M PE + G + DV++FGVVL+E+ + E
Sbjct: 177 RDIYETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 230
Query: 486 IVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQ 545
+G + E+VL + + L P DNCP D + +L ++C Q
Sbjct: 231 PYQGLSN-----------EQVLRF---VMEGGLLDKP---DNCP-DMLF---ELMRMCWQ 269
Query: 546 EYPQLRPSMRSIVVALMTLSSTTEDWDVG----SFY 577
P++RPS I+ SS E+ + G SFY
Sbjct: 270 YNPKMRPSFLEII------SSIKEEMEPGFREVSFY 299
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 130/300 (43%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 227
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G+L + L+G L V +A
Sbjct: 228 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 288 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + G + EVL
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVNREVL-- 391
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 392 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 157/333 (47%), Gaps = 62/333 (18%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E A + +MS ++GQG FG VY +G + +R + + + + A+ M+
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAAS-----MRE 65
Query: 325 SREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRD------ 377
EFL E V+ + ++VRL+G +G ++ E + G+L +LR +
Sbjct: 66 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 378 --PLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
P S +Q+A + A G+ Y++ + ++HRD+ + N ++ ++F K+ DFG+T+
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 182
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ G LP R +M PE + G + DV++FGVVL+E+ + E +
Sbjct: 183 XETDXXRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 236
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G + E+VL + + L P DNCP D + +L ++C Q P
Sbjct: 237 GLSN-----------EQVLRF---VMEGGLLDKP---DNCP-DMLF---ELMRMCWQYNP 275
Query: 549 QLRPSMRSIVVALMTLSSTTEDWDVG----SFY 577
++RPS I+ SS E+ + G SFY
Sbjct: 276 KMRPSFLEII------SSIKEEMEPGFREVSFY 302
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 144/313 (46%), Gaps = 52/313 (16%)
Query: 262 FSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMD 321
F +E + + ++ ++GQG FG VY R +R + V + + A++++
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRE-- 63
Query: 322 MQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLR-------- 372
EFL E V+ ++VRL+G +G +V E + +G+L +LR
Sbjct: 64 ---RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN 120
Query: 373 GSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT 432
GR P +Q+A + A G+ Y++ ++HRD+ + N ++ +F K+ DFG+T
Sbjct: 121 NPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 433 K-------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEA 485
+ + G LP R +M PE + G + D+++FGVVL+E+ S E
Sbjct: 178 RDIXETDXXRKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 486 IVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQ 545
+G + E+VL + D L P DNCP ++ L ++C Q
Sbjct: 232 PYQGLSN-----------EQVLKF---VMDGGYLDQP---DNCP----ERVTDLMRMCWQ 270
Query: 546 EYPQLRPSMRSIV 558
P++RP+ IV
Sbjct: 271 FNPKMRPTFLEIV 283
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 54
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G+L + L+G L V +A
Sbjct: 55 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 114
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 115 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 171
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + KG G+V EVL
Sbjct: 172 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGR---VPYPGMVN--REVL-- 218
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 219 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 270
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 144/313 (46%), Gaps = 52/313 (16%)
Query: 262 FSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMD 321
F +E + + ++ ++GQG FG VY R +R + V + + A++++
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRE-- 60
Query: 322 MQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRG------- 373
EFL E V+ ++VRL+G +G +V E + +G+L +LR
Sbjct: 61 ---RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN 117
Query: 374 -SGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT 432
GR P +Q+A + A G+ Y++ ++HRD+ + N ++ +F K+ DFG+T
Sbjct: 118 NPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMT 174
Query: 433 K-------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEA 485
+ + G LP R +M PE + G + D+++FGVVL+E+ S E
Sbjct: 175 RDIXETDXXRKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 228
Query: 486 IVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQ 545
+G + E+VL + D L P DNCP ++ L ++C Q
Sbjct: 229 PYQGLSN-----------EQVLKF---VMDGGYLDQP---DNCP----ERVTDLMRMCWQ 267
Query: 546 EYPQLRPSMRSIV 558
P++RP+ IV
Sbjct: 268 FNPKMRPTFLEIV 280
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 154/333 (46%), Gaps = 62/333 (18%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E A + +MS ++GQG FG VY +G + +R+ K + M+
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAI------KTVNEAASMRE 64
Query: 325 SREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRD------ 377
EFL E V+ + ++VRL+G +G ++ E + G+L +LR +
Sbjct: 65 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 378 --PLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
P S +Q+A + A G+ Y++ + ++HRD+ + N ++ ++F K+ DFG+T+
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ G LP R +M PE + G + DV++FGVVL+E+ + E +
Sbjct: 182 YETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 235
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G + E+VL + + L P DNCP D + +L ++C Q P
Sbjct: 236 GLSN-----------EQVLRF---VMEGGLLDKP---DNCP-DMLF---ELMRMCWQYNP 274
Query: 549 QLRPSMRSIVVALMTLSSTTEDWDVG----SFY 577
++RPS I+ SS E+ + G SFY
Sbjct: 275 KMRPSFLEII------SSIKEEMEPGFREVSFY 301
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 154/333 (46%), Gaps = 62/333 (18%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E A + +MS ++GQG FG VY +G + +R+ K + M+
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAI------KTVNEAASMRE 58
Query: 325 SREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRD------ 377
EFL E V+ + ++VRL+G +G ++ E + G+L +LR +
Sbjct: 59 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 118
Query: 378 --PLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
P S +Q+A + A G+ Y++ + ++HRD+ + N ++ ++F K+ DFG+T+
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 175
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ G LP R +M PE + G + DV++FGVVL+E+ + E +
Sbjct: 176 YETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 229
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G + E+VL + + L P DNCP D + +L ++C Q P
Sbjct: 230 GLSN-----------EQVLRF---VMEGGLLDKP---DNCP-DMLF---ELMRMCWQYNP 268
Query: 549 QLRPSMRSIVVALMTLSSTTEDWDVG----SFY 577
++RPS I+ SS E+ + G SFY
Sbjct: 269 KMRPSFLEII------SSIKEEMEPGFREVSFY 295
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 154/333 (46%), Gaps = 62/333 (18%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E A + +MS ++GQG FG VY +G + +R+ K + M+
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAI------KTVNEAASMRE 64
Query: 325 SREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRD------ 377
EFL E V+ + ++VRL+G +G ++ E + G+L +LR +
Sbjct: 65 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 378 --PLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
P S +Q+A + A G+ Y++ + ++HRD+ + N ++ ++F K+ DFG+T+
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ G LP R +M PE + G + DV++FGVVL+E+ + E +
Sbjct: 182 YETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 235
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G + E+VL + + L P DNCP D + +L ++C Q P
Sbjct: 236 GLSN-----------EQVLRF---VMEGGLLDKP---DNCP-DMLF---ELMRMCWQYNP 274
Query: 549 QLRPSMRSIVVALMTLSSTTEDWDVG----SFY 577
++RPS I+ SS E+ + G SFY
Sbjct: 275 KMRPSFLEII------SSIKEEMEPGFREVSFY 301
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 61
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G+L + L+G L V +A
Sbjct: 62 QEAQVMKKIRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 122 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + KG G+V EVL
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGR---VPYPGMVN--REVL-- 225
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 226 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 154/333 (46%), Gaps = 62/333 (18%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E A + +MS ++GQG FG VY +G + +R+ K + M+
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAI------KTVNEAASMRE 58
Query: 325 SREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRD------ 377
EFL E V+ + ++VRL+G +G ++ E + G+L +LR +
Sbjct: 59 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 118
Query: 378 --PLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
P S +Q+A + A G+ Y++ + ++HRD+ + N + ++F K+ DFG+T+
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDI 175
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ G LP R +M PE + G + DV++FGVVL+E+ + E +
Sbjct: 176 YETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 229
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G + E+VL + + L P DNCP D +L +L ++C Q P
Sbjct: 230 GLSN-----------EQVLRF---VMEGGLLDKP---DNCP-DMLL---ELMRMCWQYNP 268
Query: 549 QLRPSMRSIVVALMTLSSTTEDWDVG----SFY 577
++RPS I+ SS E+ + G SFY
Sbjct: 269 KMRPSFLEII------SSIKEEMEPGFREVSFY 295
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 154/333 (46%), Gaps = 62/333 (18%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E A + +MS ++GQG FG VY +G + +R+ K + M+
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAI------KTVNEAASMRE 65
Query: 325 SREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRD------ 377
EFL E V+ + ++VRL+G +G ++ E + G+L +LR +
Sbjct: 66 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 378 --PLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
P S +Q+A + A G+ Y++ + ++HRD+ + N ++ ++F K+ DFG+T+
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 182
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ G LP R +M PE + G + DV++FGVVL+E+ + E +
Sbjct: 183 YETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 236
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G + E+VL + + L P DNCP D + +L ++C Q P
Sbjct: 237 GLSN-----------EQVLRF---VMEGGLLDKP---DNCP-DMLF---ELMRMCWQYNP 275
Query: 549 QLRPSMRSIVVALMTLSSTTEDWDVG----SFY 577
++RPS I+ SS E+ + G SFY
Sbjct: 276 KMRPSFLEII------SSIKEEMEPGFREVSFY 302
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 61
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G+L + L+G L V +A
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 122 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 178
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + KG G+V EVL
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGR---VPYPGMVN--REVL-- 225
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 226 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 154/333 (46%), Gaps = 62/333 (18%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E A + +MS ++GQG FG VY +G + +R+ K + M+
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAI------KTVNEAASMRE 93
Query: 325 SREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRD------ 377
EFL E V+ + ++VRL+G +G ++ E + G+L +LR +
Sbjct: 94 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 153
Query: 378 --PLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
P S +Q+A + A G+ Y++ + ++HRD+ + N ++ ++F K+ DFG+T+
Sbjct: 154 LAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 210
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ G LP R +M PE + G + DV++FGVVL+E+ + E +
Sbjct: 211 YETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 264
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G + E+VL + + L P DNCP D + +L ++C Q P
Sbjct: 265 GLSN-----------EQVLRF---VMEGGLLDKP---DNCP-DMLF---ELMRMCWQYNP 303
Query: 549 QLRPSMRSIVVALMTLSSTTEDWDVG----SFY 577
++RPS I+ SS E+ + G SFY
Sbjct: 304 KMRPSFLEII------SSIKEEMEPGFREVSFY 330
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 154/333 (46%), Gaps = 62/333 (18%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E A + +MS ++GQG FG VY +G + +R+ K + M+
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAI------KTVNEAASMRE 71
Query: 325 SREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLV-YEYIENGNLSEHLRGSGRD------ 377
EFL E V+ + ++VRL+G +G LV E + G+L +LR +
Sbjct: 72 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 131
Query: 378 --PLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
P S +Q+A + A G+ Y++ + ++HRD+ + N ++ ++F K+ DFG+T+
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ G LP R +M PE + G + DV++FGVVL+E+ + E +
Sbjct: 189 YETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 242
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G + E+VL + + L P DNCP D + +L ++C Q P
Sbjct: 243 GLSN-----------EQVLRF---VMEGGLLDKP---DNCP-DMLF---ELMRMCWQYNP 281
Query: 549 QLRPSMRSIVVALMTLSSTTEDWDVG----SFY 577
++RPS I+ SS E+ + G SFY
Sbjct: 282 KMRPSFLEII------SSIKEEMEPGFREVSFY 308
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 144/313 (46%), Gaps = 52/313 (16%)
Query: 262 FSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMD 321
F +E + + ++ ++GQG FG VY R +R + V + + A++++
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRE-- 63
Query: 322 MQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRG------- 373
EFL E V+ ++VRL+G +G +V E + +G+L +LR
Sbjct: 64 ---RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN 120
Query: 374 -SGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT 432
GR P +Q+A + A G+ Y++ ++HRD+ + N ++ +F K+ DFG+T
Sbjct: 121 NPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 433 K-------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEA 485
+ + G LP R +M PE + G + D+++FGVVL+E+ S E
Sbjct: 178 RDIYETDYYRKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 486 IVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQ 545
+G + E+VL + D L P DNCP ++ L ++C Q
Sbjct: 232 PYQGLSN-----------EQVLKF---VMDGGYLDQP---DNCP----ERVTDLMRMCWQ 270
Query: 546 EYPQLRPSMRSIV 558
P++RP+ IV
Sbjct: 271 FNPKMRPTFLEIV 283
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 133/300 (44%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 58
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G+L + L+G L V ++
Sbjct: 59 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA 118
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 119 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP 175
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + KG G+V EVL
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGR---VPYPGMVN--REVL-- 222
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 223 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 274
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 132/300 (44%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 51
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E + +V EY+ G+L + L+G L V +A
Sbjct: 52 QEAQVMKKLRHEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 111
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 112 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 168
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + KG G+V EVL
Sbjct: 169 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGR---VPYPGMVN--REVL-- 215
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 216 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 267
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 144/313 (46%), Gaps = 52/313 (16%)
Query: 262 FSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMD 321
F +E + + ++ ++GQG FG VY R +R + V + + A++++
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRE-- 63
Query: 322 MQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRG------- 373
EFL E V+ ++VRL+G +G +V E + +G+L +LR
Sbjct: 64 ---RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN 120
Query: 374 -SGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT 432
GR P +Q+A + A G+ Y++ ++HRD+ + N ++ +F K+ DFG+T
Sbjct: 121 NPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 433 K-------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEA 485
+ + G LP R +M PE + G + D+++FGVVL+E+ S E
Sbjct: 178 RDIYETAYYRKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 486 IVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQ 545
+G + E+VL + D L P DNCP ++ L ++C Q
Sbjct: 232 PYQGLSN-----------EQVLKF---VMDGGYLDQP---DNCP----ERVTDLMRMCWQ 270
Query: 546 EYPQLRPSMRSIV 558
P++RP+ IV
Sbjct: 271 FNPKMRPTFLEIV 283
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 155/333 (46%), Gaps = 62/333 (18%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E A + +MS ++GQG FG VY +G + +R+ K + M+
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAI------KTVNEAASMRE 61
Query: 325 SREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLR----GSGRDPL 379
EFL E V+ + ++VRL+G +G ++ E + G+L +LR +P+
Sbjct: 62 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 121
Query: 380 ----PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
S +Q+A + A G+ Y++ + ++HRD+ + N ++ ++F K+ DFG+T+
Sbjct: 122 LAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 178
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ G LP R +M PE + G + DV++FGVVL+E+ + E +
Sbjct: 179 YETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 232
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G + E+VL + + L P DNCP D + +L ++C Q P
Sbjct: 233 GLSN-----------EQVLRF---VMEGGLLDKP---DNCP-DMLF---ELMRMCWQYNP 271
Query: 549 QLRPSMRSIVVALMTLSSTTEDWDVG----SFY 577
++RPS I+ SS E+ + G SFY
Sbjct: 272 KMRPSFLEII------SSIKEEMEPGFREVSFY 298
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 50
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G+L + L+G L V +A
Sbjct: 51 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 110
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 111 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 167
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + KG G+V EVL
Sbjct: 168 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGR---VPYPGMVN--REVL-- 214
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 215 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 266
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 52
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G+L + L+G L V +A
Sbjct: 53 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 112
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 113 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 169
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + KG G+V EVL
Sbjct: 170 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGR---VPYPGMVN--REVL-- 216
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 217 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 268
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 150/313 (47%), Gaps = 41/313 (13%)
Query: 261 EFSYEELSKATDN-FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKK 319
EF L DN +IG+GGFG V+ L + + LI + + I+K
Sbjct: 7 EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK 66
Query: 320 MDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPL 379
+EF E+ ++++++H N+V+L G + +V E++ G+L L P+
Sbjct: 67 F-----QEFQREVFIMSNLNHPNIVKLYG-LMHNPPRMVMEFVPCGDLYHRLLDKAH-PI 119
Query: 380 PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANIL---IDKN--FHAKVADFGLTKL 434
WS ++++ LD A G+EY+ P+ +HRD++S NI +D+N AKVADFGL++
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNPPI-VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ 178
Query: 435 TEVGSASLPTRLVGTFGYMPPEY--AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
+ V S S L+G F +M PE A+ + K D Y+F ++LY I+ G G
Sbjct: 179 S-VHSVS---GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILY-------TILTGEGP 227
Query: 493 SAD-SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLR 551
+ S G + + E LR P + ++CP ++ + ++C P+ R
Sbjct: 228 FDEYSYGKIKFINMIRE-----EGLR----PTIPEDCP----PRLRNVIELCWSGDPKKR 274
Query: 552 PSMRSIVVALMTL 564
P IV L L
Sbjct: 275 PHFSYIVKELSEL 287
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 155/333 (46%), Gaps = 62/333 (18%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E A + +MS ++GQG FG VY +G + +R+ K + M+
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAI------KTVNEAASMRE 71
Query: 325 SREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLV-YEYIENGNLSEHLR----GSGRDPL 379
EFL E V+ + ++VRL+G +G LV E + G+L +LR +P+
Sbjct: 72 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 131
Query: 380 ----PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
S +Q+A + A G+ Y++ + ++HRD+ + N ++ ++F K+ DFG+T+
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ G LP R +M PE + G + DV++FGVVL+E+ + E +
Sbjct: 189 YETDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 242
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G + E+VL + + L P DNCP D + +L ++C Q P
Sbjct: 243 GLSN-----------EQVLRF---VMEGGLLDKP---DNCP-DMLF---ELMRMCWQYNP 281
Query: 549 QLRPSMRSIVVALMTLSSTTEDWDVG----SFY 577
++RPS I+ SS E+ + G SFY
Sbjct: 282 KMRPSFLEII------SSIKEEMEPGFREVSFY 308
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 61
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G+L + L+G L V +A
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 122 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + KG G+V EVL
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGR---VPYPGMVN--REVL-- 225
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 226 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 61
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G+L + L+G L V +A
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 122 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + KG G+V EVL
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGR---VPYPGMVN--REVL-- 225
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 226 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 133/300 (44%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 58
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G+L + L+G L V ++
Sbjct: 59 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA 118
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 119 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 175
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + KG G+V EVL
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGR---VPYPGMVN--REVL-- 222
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 223 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 274
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 61
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G+L + L+G L V +A
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 122 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + KG G+V EVL
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGR---VPYPGMVN--REVL-- 225
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 226 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 130/300 (43%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGNMSPEAFL 228
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G+L + L+G L V +A
Sbjct: 229 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 288
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 289 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP 345
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + G + EVL
Sbjct: 346 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVNREVL-- 392
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 393 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 444
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
++ +IG G FG VY + G+ + V +L A Q + F E+
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTP----QQLQAFKNEV 60
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
VL H+N++ +GY + L +V ++ E +L HL + IA +A
Sbjct: 61 GVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTA 119
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP-TRLVGTFG 451
+G++Y+H ++ IHRD+KS NI + ++ K+ DFGL + S S +L G+
Sbjct: 120 QGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 452 YMPPEYAQYGDVSP---KVDVYAFGVVLYELISAK 483
+M PE + D +P + DVYAFG+VLYEL++ +
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 52/310 (16%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E + + ++ ++GQG FG VY R +R + V + + A++++
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRE----- 63
Query: 325 SREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLR--------GSG 375
EFL E V+ ++VRL+G +G +V E + +G+L +LR G
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 376 RDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
R P +Q+A + A G+ Y++ ++HRD+ + N ++ +F K+ DFG+T+
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ G LP R +M PE + G + D+++FGVVL+E+ S E +
Sbjct: 181 XETDXXRKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 234
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G + E+VL + D L P DNCP ++ L ++C Q P
Sbjct: 235 GLSN-----------EQVLKF---VMDGGYLDQP---DNCP----ERVTDLMRMCWQFNP 273
Query: 549 QLRPSMRSIV 558
+RP+ IV
Sbjct: 274 NMRPTFLEIV 283
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
++ +IG G FG VY + G+ + V +L A Q + F E+
Sbjct: 36 QITVGQRIGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTP----QQLQAFKNEV 82
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
VL H+N++ +GY + L +V ++ E +L HL + IA +A
Sbjct: 83 GVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTA 141
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP-TRLVGTFG 451
+G++Y+H ++ IHRD+KS NI + ++ K+ DFGL + S S +L G+
Sbjct: 142 QGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 198
Query: 452 YMPPEYAQYGDVSP---KVDVYAFGVVLYELISAK 483
+M PE + D +P + DVYAFG+VLYEL++ +
Sbjct: 199 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
++ +IG G FG VY + G+ + V +L A Q + F E+
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTP----QQLQAFKNEV 55
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
VL H+N++ +GY + L +V ++ E +L HL + IA +A
Sbjct: 56 GVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTA 114
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP-TRLVGTFG 451
+G++Y+H ++ IHRD+KS NI + ++ K+ DFGL + S S +L G+
Sbjct: 115 QGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 452 YMPPEYAQYGDVSP---KVDVYAFGVVLYELISAK 483
+M PE + D +P + DVYAFG+VLYEL++ +
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
++ +IG G FG VY + G+ + V +L A Q + F E+
Sbjct: 37 QITVGQRIGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTP----QQLQAFKNEV 83
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
VL H+N++ +GY + L +V ++ E +L HL + IA +A
Sbjct: 84 GVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTA 142
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP-TRLVGTFG 451
+G++Y+H ++ IHRD+KS NI + ++ K+ DFGL + S S +L G+
Sbjct: 143 QGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 199
Query: 452 YMPPEYAQYGDVSP---KVDVYAFGVVLYELISAK 483
+M PE + D +P + DVYAFG+VLYEL++ +
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
++ +IG G FG VY + G+ + V +L A Q + F E+
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTP----QQLQAFKNEV 60
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
VL H+N++ +GY + L +V ++ E +L HL + IA +A
Sbjct: 61 GVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTA 119
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP-TRLVGTFG 451
+G++Y+H ++ IHRD+KS NI + ++ K+ DFGL + S S +L G+
Sbjct: 120 QGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 452 YMPPEYAQYGDVSP---KVDVYAFGVVLYELISAK 483
+M PE + D +P + DVYAFG+VLYEL++ +
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
++ +IG G FG VY + G+ + V +L A Q + F E+
Sbjct: 11 QITVGQRIGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTP----QQLQAFKNEV 57
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
VL H+N++ +GY + L +V ++ E +L HL + IA +A
Sbjct: 58 GVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTA 116
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP-TRLVGTFG 451
+G++Y+H ++ IHRD+KS NI + ++ K+ DFGL + S S +L G+
Sbjct: 117 QGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 173
Query: 452 YMPPEYAQYGDVSP---KVDVYAFGVVLYELISAK 483
+M PE + D +P + DVYAFG+VLYEL++ +
Sbjct: 174 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 132/300 (44%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 61
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G L + L+G L V +A
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 122 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + KG G+V EVL
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGR---VPYPGMVN--REVL-- 225
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 226 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 132/300 (44%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 61
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G L + L+G L V +A
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+++ANIL+ +N KVADFGL +L E +
Sbjct: 122 QIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + KG G+V EVL
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGR---VPYPGMVN--REVL-- 225
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 226 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
++ +IG G FG VY + G+ + V +L A Q + F E+
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTP----QQLQAFKNEV 55
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
VL H+N++ +GY L +V ++ E +L HL + IA +A
Sbjct: 56 GVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTA 114
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP-TRLVGTFG 451
+G++Y+H ++ IHRD+KS NI + ++ K+ DFGL + S S +L G+
Sbjct: 115 QGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 452 YMPPEYAQYGDVSP---KVDVYAFGVVLYELISAK 483
+M PE + D +P + DVYAFG+VLYEL++ +
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 132/300 (44%), Gaps = 42/300 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+GQG FG V+ G + AIK K + FL
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNG----------------TTRVAIKTLKPGTMSPEAFL 61
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +V+ + H LV+L E +++V EY+ G+L + L+G L V +A
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
A G+ Y+ Y+HRD+ +ANIL+ +N KVADFGL +L E +
Sbjct: 122 QIASGMAYVERMN---YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
+ PE A YG + K DV++FG++L EL + KG G+V EVL
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGR---VPYPGMVN--REVL-- 225
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
D +E ++ CP + + L C ++ P+ RP+ + L ++TE
Sbjct: 226 -DQVERGYRM-------PCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
++ +IG G FG VY + G+ + V +L A Q + F E+
Sbjct: 29 QITVGQRIGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTP----QQLQAFKNEV 75
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
VL H+N++ +GY + L +V ++ E +L HL + IA +A
Sbjct: 76 GVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTA 134
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL-TKLTEVGSASLPTRLVGTFG 451
+G++Y+H ++ IHRD+KS NI + ++ K+ DFGL T+ + + +L G+
Sbjct: 135 QGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 191
Query: 452 YMPPEYAQYGDVSP---KVDVYAFGVVLYELISAK 483
+M PE + D +P + DVYAFG+VLYEL++ +
Sbjct: 192 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 141/305 (46%), Gaps = 52/305 (17%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
+ + ++ ++GQG FG VY R +R + V + + A++++ EFL
Sbjct: 14 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRE-----RIEFL 67
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRG--------SGRDPLP 380
E V+ ++VRL+G +G +V E + +G+L +LR GR P
Sbjct: 68 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 127
Query: 381 WSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK------- 433
+Q+A + A G+ Y++ ++HRD+ + N ++ +F K+ DFG+T+
Sbjct: 128 LQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY 184
Query: 434 LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSS 493
+ G LP R +M PE + G + D+++FGVVL+E+ S E +G +
Sbjct: 185 YRKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN- 237
Query: 494 ADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPS 553
E+VL + D L P DNCP ++ L ++C Q P++RP+
Sbjct: 238 ----------EQVLKF---VMDGGYLDQP---DNCP----ERVTDLMRMCWQFNPKMRPT 277
Query: 554 MRSIV 558
IV
Sbjct: 278 FLEIV 282
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
++ +IG G FG VY + G+ + V +L A Q + F E+
Sbjct: 37 QITVGQRIGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTP----QQLQAFKNEV 83
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
VL H+N++ +GY + L +V ++ E +L HL + IA +A
Sbjct: 84 GVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTA 142
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL-TKLTEVGSASLPTRLVGTFG 451
+G++Y+H ++ IHRD+KS NI + ++ K+ DFGL T+ + + +L G+
Sbjct: 143 QGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 199
Query: 452 YMPPEYAQYGDVSP---KVDVYAFGVVLYELISAK 483
+M PE + D +P + DVYAFG+VLYEL++ +
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
++ +IG G FG VY + G+ + V +L A Q + F E+
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTP----QQLQAFKNEV 55
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
VL H+N++ +GY + L +V ++ E +L HL + IA +A
Sbjct: 56 GVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTA 114
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL-TKLTEVGSASLPTRLVGTFG 451
+G++Y+H ++ IHRD+KS NI + ++ K+ DFGL T+ + + +L G+
Sbjct: 115 QGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 171
Query: 452 YMPPEYAQYGDVSP---KVDVYAFGVVLYELISAK 483
+M PE + D +P + DVYAFG+VLYEL++ +
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 147/313 (46%), Gaps = 41/313 (13%)
Query: 261 EFSYEELSKATDN-FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKK 319
EF L DN +IG+GGFG V+ L + + LI + + I+K
Sbjct: 7 EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK 66
Query: 320 MDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPL 379
+EF E+ ++++++H N+V+L G + +V E++ G+L L P+
Sbjct: 67 F-----QEFQREVFIMSNLNHPNIVKLYG-LMHNPPRMVMEFVPCGDLYHRLLDKAH-PI 119
Query: 380 PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANIL---IDKN--FHAKVADFGLTKL 434
WS ++++ LD A G+EY+ P+ +HRD++S NI +D+N AKVADFG T
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNPPI-VHRDLRSPNIFLQSLDENAPVCAKVADFG-TSQ 177
Query: 435 TEVGSASLPTRLVGTFGYMPPEY--AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
V S S L+G F +M PE A+ + K D Y+F ++LY I+ G G
Sbjct: 178 QSVHSVS---GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILY-------TILTGEGP 227
Query: 493 SAD-SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLR 551
+ S G + + E LR P + ++CP ++ + ++C P+ R
Sbjct: 228 FDEYSYGKIKFINMIRE-----EGLR----PTIPEDCP----PRLRNVIELCWSGDPKKR 274
Query: 552 PSMRSIVVALMTL 564
P IV L L
Sbjct: 275 PHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 149/313 (47%), Gaps = 41/313 (13%)
Query: 261 EFSYEELSKATDN-FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKK 319
EF L DN +IG+GGFG V+ L + + LI + + I+K
Sbjct: 7 EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK 66
Query: 320 MDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPL 379
+EF E+ ++++++H N+V+L G + +V E++ G+L L P+
Sbjct: 67 F-----QEFQREVFIMSNLNHPNIVKLYG-LMHNPPRMVMEFVPCGDLYHRLLDKAH-PI 119
Query: 380 PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANIL---IDKN--FHAKVADFGLTKL 434
WS ++++ LD A G+EY+ P+ +HRD++S NI +D+N AKVADF L++
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNPPI-VHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ 178
Query: 435 TEVGSASLPTRLVGTFGYMPPEY--AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
+ V S S L+G F +M PE A+ + K D Y+F ++LY I+ G G
Sbjct: 179 S-VHSVS---GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILY-------TILTGEGP 227
Query: 493 SAD-SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLR 551
+ S G + + E LR P + ++CP ++ + ++C P+ R
Sbjct: 228 FDEYSYGKIKFINMIRE-----EGLR----PTIPEDCP----PRLRNVIELCWSGDPKKR 274
Query: 552 PSMRSIVVALMTL 564
P IV L L
Sbjct: 275 PHFSYIVKELSEL 287
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 142/310 (45%), Gaps = 52/310 (16%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E + + ++ ++GQG FG VY R +R + V + + A++++
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRE----- 64
Query: 325 SREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLR--------GSG 375
EFL E V+ ++VRL+G +G +V E + +G+L +LR G
Sbjct: 65 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 124
Query: 376 RDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
R P +Q+A + A G+ Y++ ++HR++ + N ++ +F K+ DFG+T+
Sbjct: 125 RPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDI 181
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ G LP R +M PE + G + D+++FGVVL+E+ S E +
Sbjct: 182 YETDYYRKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 235
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G + E+VL + D L P DNCP ++ L ++C Q P
Sbjct: 236 GLSN-----------EQVLKF---VMDGGYLDQP---DNCP----ERVTDLMRMCWQFNP 274
Query: 549 QLRPSMRSIV 558
+RP+ IV
Sbjct: 275 NMRPTFLEIV 284
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 143/312 (45%), Gaps = 55/312 (17%)
Query: 258 KSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAI 317
K V +E + +D IG+G FG VY+ GEY + +R+ C K+
Sbjct: 12 KDVLIPHERVVTHSDRV-----IGKGHFGVVYH----GEYIDQAQNRIQCAI----KSLS 58
Query: 318 KKMDMQASREFLAELKVLTHVHHLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSG 375
+ +MQ FL E ++ ++H N++ LIG + EG ++ Y+ +G+L + +R
Sbjct: 59 RITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ 118
Query: 376 RDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
R+P + L ARG+EY+ E ++HRD+ + N ++D++F KVADFGL +
Sbjct: 119 RNPTV-KDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDI 174
Query: 434 -------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAI 486
+ + A LP + E Q + K DV++FGV+L+EL++
Sbjct: 175 LDREYYSVQQHRHARLPVKWTAL------ESLQTYRFTTKSDVWSFGVLLWELLTRGAPP 228
Query: 487 VKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQE 546
+ D L + LP P + CP DS + Q+ + C +
Sbjct: 229 YR----HIDPFDLTHFLAQGRRLPQP-------------EYCP-DS---LYQVMQQCWEA 267
Query: 547 YPQLRPSMRSIV 558
P +RP+ R +V
Sbjct: 268 DPAVRPTFRVLV 279
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 146/326 (44%), Gaps = 75/326 (23%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNL-------LMQKAAIKKMDMQAS 325
+ + ++G+G FG V+ AE C NL L+ A+K + A
Sbjct: 16 DIVLKRELGEGAFGKVFLAE--------------CYNLSPTKDKMLVAVKALKDPTLAAR 61
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDP------ 378
++F E ++LT++ H ++V+ G C +G L +V+EY+++G+L++ LR G D
Sbjct: 62 KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDG 121
Query: 379 --------LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFG 430
L S + IA A G+ Y+ ++HRD+ + N L+ N K+ DFG
Sbjct: 122 QPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFG 178
Query: 431 L------TKLTEVGSAS-LPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS-A 482
+ T VG + LP R +MPPE Y + + DV++FGV+L+E+ +
Sbjct: 179 MSRDVYSTDYYRVGGHTMLPIR------WMPPESIMYRKFTTESDVWSFGVILWEIFTYG 232
Query: 483 KEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKV 542
K+ + + + EV+ + I R L PR+ CP + M
Sbjct: 233 KQPWFQLSNT------------EVI---ECITQGRVLERPRV---CPKEVYDVMLG---- 270
Query: 543 CTQEYPQLRPSMRSIVVALMTLSSTT 568
C Q PQ R +++ I L L T
Sbjct: 271 CWQREPQQRLNIKEIYKILHALGKAT 296
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 142/310 (45%), Gaps = 52/310 (16%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E + + ++ ++GQG FG VY R +R + V + + A++++
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETR-VAVKTVNESASLRE----- 63
Query: 325 SREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLR--------GSG 375
EFL E V+ ++VRL+G +G +V E + +G+L +LR G
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 376 RDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
R P +Q+A + A G+ Y++ ++HR++ + N ++ +F K+ DFG+T+
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ G LP R +M PE + G + D+++FGVVL+E+ S E +
Sbjct: 181 YETDYYRKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 234
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G + E+VL + D L P DNCP ++ L ++C Q P
Sbjct: 235 GLSN-----------EQVLKF---VMDGGYLDQP---DNCP----ERVTDLMRMCWQFNP 273
Query: 549 QLRPSMRSIV 558
+RP+ IV
Sbjct: 274 NMRPTFLEIV 283
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 65/298 (21%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-FLAELKVLTHV 338
+G+G FG V A+ R + AIK+++ ++ R+ F+ EL+ L+ V
Sbjct: 17 VGRGAFGVVCKAKWRA-----------------KDVAIKQIESESERKAFIVELRQLSRV 59
Query: 339 HHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPW---SSRVQIALDSARGL 395
+H N+V+L G C+ + LV EY E G+L L G+ +PLP+ + + L ++G+
Sbjct: 60 NHPNIVKLYGACL-NPVCLVMEYAEGGSLYNVLHGA--EPLPYYTAAHAMSWCLQCSQGV 116
Query: 396 EYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LPTRLV---GTFG 451
Y+H IHRD+K N+L+ VA + K+ + G+A + T + G+
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLL-------VAGGTVLKICDFGTACDIQTHMTNNKGSAA 169
Query: 452 YMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSS-----ADSKGLVALFEEV 506
+M PE + + S K DV+++G++L+E+I+ ++ + G + A G +
Sbjct: 170 WMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL--I 227
Query: 507 LNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
NLP PIE L C + P RPSM IV + L
Sbjct: 228 KNLPKPIESLMTR-----------------------CWSKDPSQRPSMEEIVKIMTHL 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 65/298 (21%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-FLAELKVLTHV 338
+G+G FG V A+ R + AIK+++ ++ R+ F+ EL+ L+ V
Sbjct: 16 VGRGAFGVVCKAKWRA-----------------KDVAIKQIESESERKAFIVELRQLSRV 58
Query: 339 HHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPW---SSRVQIALDSARGL 395
+H N+V+L G C+ + LV EY E G+L L G+ +PLP+ + + L ++G+
Sbjct: 59 NHPNIVKLYGACL-NPVCLVMEYAEGGSLYNVLHGA--EPLPYYTAAHAMSWCLQCSQGV 115
Query: 396 EYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LPTRLV---GTFG 451
Y+H IHRD+K N+L+ VA + K+ + G+A + T + G+
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLL-------VAGGTVLKICDFGTACDIQTHMTNNKGSAA 168
Query: 452 YMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSS-----ADSKGLVALFEEV 506
+M PE + + S K DV+++G++L+E+I+ ++ + G + A G +
Sbjct: 169 WMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL--I 226
Query: 507 LNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
NLP PIE L C + P RPSM IV + L
Sbjct: 227 KNLPKPIES-----------------------LMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 50/296 (16%)
Query: 278 HKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE--FLAELKVL 335
+IG G FG V+ G + N K AIK + A E F+ E +V+
Sbjct: 13 QEIGSGQFGLVHL----GYWLNK------------DKVAIKTIREGAMSEEDFIEEAEVM 56
Query: 336 THVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARG 394
+ H LV+L G C+E + + LV+E++E+G LS++LR + R + + + LD G
Sbjct: 57 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEG 115
Query: 395 LEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMP 454
+ Y+ E +V IHRD+ + N L+ +N KV+DFG+T+ + T +
Sbjct: 116 MAYLEEASV---IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 172
Query: 455 PEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIE 514
PE + S K DV++FGV+++E+ S + + +S + +E
Sbjct: 173 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----------------EVVE 215
Query: 515 DLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSST 567
D+ +L PRL + Q+ C +E P+ RP+ ++ L ++++
Sbjct: 216 DISTGFRLYKPRLAST-------HVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 129/283 (45%), Gaps = 46/283 (16%)
Query: 281 GQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKV--LTHV 338
+G FG V+ A+L EY A+K +Q + + E +V L +
Sbjct: 33 ARGRFGCVWKAQLLNEY-----------------VAVKIFPIQDKQSWQNEYEVYSLPGM 75
Query: 339 HHLNLVRLIGYCVEGS-----LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR 393
H N+++ IG G+ L+L+ + E G+LS+ L+ + + W+ IA AR
Sbjct: 76 KHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMAR 132
Query: 394 GLEYIHEHT-------VPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR- 445
GL Y+HE P HRDIKS N+L+ N A +ADFGL E G ++ T
Sbjct: 133 GLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHG 192
Query: 446 LVGTFGYMPPEYAQYG-----DVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
VGT YM PE + D ++D+YA G+VL+EL S + + +
Sbjct: 193 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS------RCTAADGPVDEYM 246
Query: 501 ALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVC 543
FEE + +ED++++V + D K A +A +C
Sbjct: 247 LPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLC 289
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 138/296 (46%), Gaps = 44/296 (14%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+ ++ ++G G FG V + +G+Y + V + IK+ M + EF E
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYD-------VAVKM------IKEGSM-SEDEFFQE 53
Query: 332 LKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
+ + + H LV+ G C E +++V EYI NG L +LR G+ P S +++ D
Sbjct: 54 AQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP-SQLLEMCYD 112
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK--LTEVGSASLPTRLVG 448
G+ ++ H +IHRD+ + N L+D++ KV+DFG+T+ L + +S+ T+
Sbjct: 113 VCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF-- 167
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLN 508
+ PE Y S K DV+AFG++++E+ S + +S E VL
Sbjct: 168 PVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS----------EVVLK 217
Query: 509 LPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
+ +L P L + + Q+ C E P+ RP+ + ++ ++ L
Sbjct: 218 ----VSQGHRLYRPHLASD-------TIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 136/296 (45%), Gaps = 50/296 (16%)
Query: 278 HKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE--FLAELKVL 335
+IG G FG V+ G + N K AIK + A E F+ E +V+
Sbjct: 11 QEIGSGQFGLVHL----GYWLNK------------DKVAIKTIREGAMSEEDFIEEAEVM 54
Query: 336 THVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARG 394
+ H LV+L G C+E + + LV+E++E+G LS++LR + R + + + LD G
Sbjct: 55 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEG 113
Query: 395 LEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMP 454
+ Y+ E V IHRD+ + N L+ +N KV+DFG+T+ + T +
Sbjct: 114 MAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 170
Query: 455 PEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIE 514
PE + S K DV++FGV+++E+ S + + +S + +E
Sbjct: 171 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----------------EVVE 213
Query: 515 DLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSST 567
D+ +L PRL + Q+ C +E P+ RP+ ++ L ++ +
Sbjct: 214 DISTGFRLYKPRLAST-------HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 136/296 (45%), Gaps = 50/296 (16%)
Query: 278 HKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE--FLAELKVL 335
+IG G FG V+ G + N K AIK + A E F+ E +V+
Sbjct: 13 QEIGSGQFGLVHL----GYWLNK------------DKVAIKTIREGAMSEEDFIEEAEVM 56
Query: 336 THVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARG 394
+ H LV+L G C+E + + LV+E++E+G LS++LR + R + + + LD G
Sbjct: 57 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEG 115
Query: 395 LEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMP 454
+ Y+ E V IHRD+ + N L+ +N KV+DFG+T+ + T +
Sbjct: 116 MAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 172
Query: 455 PEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIE 514
PE + S K DV++FGV+++E+ S + + +S + +E
Sbjct: 173 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----------------EVVE 215
Query: 515 DLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSST 567
D+ +L PRL + Q+ C +E P+ RP+ ++ L ++ +
Sbjct: 216 DISTGFRLYKPRLAST-------HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 136/296 (45%), Gaps = 50/296 (16%)
Query: 278 HKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE--FLAELKVL 335
+IG G FG V+ G + N K AIK + A E F+ E +V+
Sbjct: 16 QEIGSGQFGLVHL----GYWLNK------------DKVAIKTIREGAMSEEDFIEEAEVM 59
Query: 336 THVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARG 394
+ H LV+L G C+E + + LV+E++E+G LS++LR + R + + + LD G
Sbjct: 60 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEG 118
Query: 395 LEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMP 454
+ Y+ E V IHRD+ + N L+ +N KV+DFG+T+ + T +
Sbjct: 119 MAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 175
Query: 455 PEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIE 514
PE + S K DV++FGV+++E+ S + + +S + +E
Sbjct: 176 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----------------EVVE 218
Query: 515 DLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSST 567
D+ +L PRL + Q+ C +E P+ RP+ ++ L ++ +
Sbjct: 219 DISTGFRLYKPRLAST-------HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 142/296 (47%), Gaps = 40/296 (13%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++ + +IG+G FG V+ LR + N+ ++ C L D++A +FL E
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRAD--NTLVAVKSCRETL-------PPDLKA--KFLQE 162
Query: 332 LKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
++L H N+VRLIG C + +++V E ++ G+ LR G L + +Q+ D
Sbjct: 163 ARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGD 221
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVG--SASLPTRLVG 448
+A G+EY+ IHRD+ + N L+ + K++DFG+++ G +AS R V
Sbjct: 222 AAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV- 277
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLN 508
+ PE YG S + DV++FG++L+E S A N S+ ++ V E+
Sbjct: 278 PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLG-ASPYPNLSNQQTREFV---EKGGR 333
Query: 509 LPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
LP P + CP D+V + L + C P RPS +I L ++
Sbjct: 334 LPCP-------------ELCP-DAVFR---LMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 142/296 (47%), Gaps = 40/296 (13%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++ + +IG+G FG V+ LR + N+ ++ C L D++A +FL E
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRAD--NTLVAVKSCRETL-------PPDLKA--KFLQE 162
Query: 332 LKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
++L H N+VRLIG C + +++V E ++ G+ LR G L + +Q+ D
Sbjct: 163 ARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGD 221
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVG--SASLPTRLVG 448
+A G+EY+ IHRD+ + N L+ + K++DFG+++ G +AS R V
Sbjct: 222 AAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQV- 277
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLN 508
+ PE YG S + DV++FG++L+E S A N S+ ++ V E+
Sbjct: 278 PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLG-ASPYPNLSNQQTREFV---EKGGR 333
Query: 509 LPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
LP P + CP D+V + L + C P RPS +I L ++
Sbjct: 334 LPCP-------------ELCP-DAVFR---LMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 136/296 (45%), Gaps = 50/296 (16%)
Query: 278 HKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFLAELKVL 335
+IG G FG V+ G + N K AIK K + +F+ E +V+
Sbjct: 33 QEIGSGQFGLVHL----GYWLNK------------DKVAIKTIKEGSMSEDDFIEEAEVM 76
Query: 336 THVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARG 394
+ H LV+L G C+E + + LV+E++E+G LS++LR + R + + + LD G
Sbjct: 77 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEG 135
Query: 395 LEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMP 454
+ Y+ E V IHRD+ + N L+ +N KV+DFG+T+ + T +
Sbjct: 136 MAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 192
Query: 455 PEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIE 514
PE + S K DV++FGV+++E+ S + + +S + +E
Sbjct: 193 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----------------EVVE 235
Query: 515 DLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSST 567
D+ +L PRL + Q+ C +E P+ RP+ ++ L ++ +
Sbjct: 236 DISTGFRLYKPRLAST-------HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 128/302 (42%), Gaps = 46/302 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMD--MQASREFL 329
++ + K+G G FG V+ A K A+K M + FL
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKH----------------TKVAVKTMKPGSMSVEAFL 231
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGS--GRDPLPWSSRVQI 387
AE V+ + H LV+L + ++++ E++ G+L + L+ + PLP +
Sbjct: 232 AEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDF 289
Query: 388 ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLV 447
+ A G+ +I + YIHRD+++ANIL+ + K+ADFGL ++ E +
Sbjct: 290 SAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 346
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+ PE +G + K DV++FG++L E+++ G + ++ E
Sbjct: 347 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE----VIRALERGY 402
Query: 508 NLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSST 567
+P P +NCP + + + C + P+ RP+ I L +
Sbjct: 403 RMPRP-------------ENCPEE----LYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445
Query: 568 TE 569
TE
Sbjct: 446 TE 447
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 33/211 (15%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V Y + RG+Y + + + IK+ M + EF+ E KV+ ++
Sbjct: 31 ELGTGQFGVVKYGKWRGQYD-------VAIKM------IKEGSM-SEDEFIEEAKVMMNL 76
Query: 339 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H LV+L G C + +F++ EY+ NG L +LR R +++ D +EY
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL-------TEVGSASLPTRLVGTF 450
+ ++HRD+ + N L++ KV+DFGL++ + VGS P R
Sbjct: 136 LESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGS-KFPVR----- 186
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+ PPE Y S K D++AFGV+++E+ S
Sbjct: 187 -WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 33/211 (15%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V Y + RG+Y + + + IK+ M + EF+ E KV+ ++
Sbjct: 15 ELGTGQFGVVKYGKWRGQYD-------VAIKM------IKEGSM-SEDEFIEEAKVMMNL 60
Query: 339 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H LV+L G C + +F++ EY+ NG L +LR R +++ D +EY
Sbjct: 61 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEY 119
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL-------TEVGSASLPTRLVGTF 450
+ ++HRD+ + N L++ KV+DFGL++ + VGS P R
Sbjct: 120 LESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS-KFPVR----- 170
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+ PPE Y S K D++AFGV+++E+ S
Sbjct: 171 -WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 33/211 (15%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V Y + RG+Y + + + IK+ M + EF+ E KV+ ++
Sbjct: 11 ELGTGQFGVVKYGKWRGQYD-------VAIKM------IKEGSM-SEDEFIEEAKVMMNL 56
Query: 339 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H LV+L G C + +F++ EY+ NG L +LR R +++ D +EY
Sbjct: 57 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEY 115
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL-------TEVGSASLPTRLVGTF 450
+ ++HRD+ + N L++ KV+DFGL++ + VGS P R
Sbjct: 116 LESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS-KFPVR----- 166
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+ PPE Y S K D++AFGV+++E+ S
Sbjct: 167 -WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 33/211 (15%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V Y + RG+Y + + + IK+ M + EF+ E KV+ ++
Sbjct: 31 ELGTGQFGVVKYGKWRGQYD-------VAIKM------IKEGSM-SEDEFIEEAKVMMNL 76
Query: 339 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H LV+L G C + +F++ EY+ NG L +LR R +++ D +EY
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL-------TEVGSASLPTRLVGTF 450
+ ++HRD+ + N L++ KV+DFGL++ + VGS P R
Sbjct: 136 LESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS-KFPVR----- 186
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+ PPE Y S K D++AFGV+++E+ S
Sbjct: 187 -WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 276 MSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVL 335
+S +IG G FG VY + G+ + V +L + + + F E+ VL
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGD---------VAVKIL----KVVDPTPEQFQAFRNEVAVL 86
Query: 336 THVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGL 395
H+N++ +GY + +L +V ++ E +L +HL + IA +A+G+
Sbjct: 87 RKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGM 145
Query: 396 EYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL-VGTFGYMP 454
+Y+H + IHRD+KS NI + + K+ DFGL + S S G+ +M
Sbjct: 146 DYLHAKNI---IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 455 PEYAQYGDVSP---KVDVYAFGVVLYELISAK 483
PE + D +P + DVY++G+VLYEL++ +
Sbjct: 203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 33/211 (15%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V Y + RG+Y + + + IK+ M + EF+ E KV+ ++
Sbjct: 16 ELGTGQFGVVKYGKWRGQYD-------VAIKM------IKEGSM-SEDEFIEEAKVMMNL 61
Query: 339 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H LV+L G C + +F++ EY+ NG L +LR R +++ D +EY
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL-------TEVGSASLPTRLVGTF 450
+ ++HRD+ + N L++ KV+DFGL++ + VGS P R
Sbjct: 121 LESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS-KFPVR----- 171
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+ PPE Y S K D++AFGV+++E+ S
Sbjct: 172 -WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 33/211 (15%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V Y + RG+Y + + + IK+ M + EF+ E KV+ ++
Sbjct: 22 ELGTGQFGVVKYGKWRGQYD-------VAIKM------IKEGSM-SEDEFIEEAKVMMNL 67
Query: 339 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H LV+L G C + +F++ EY+ NG L +LR R +++ D +EY
Sbjct: 68 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEY 126
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL-------TEVGSASLPTRLVGTF 450
+ ++HRD+ + N L++ KV+DFGL++ + VGS P R
Sbjct: 127 LESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS-KFPVR----- 177
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+ PPE Y S K D++AFGV+++E+ S
Sbjct: 178 -WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 31/210 (14%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V Y + RG+Y + + + IK+ M + EF+ E KV+ ++
Sbjct: 16 ELGTGQFGVVKYGKWRGQYD-------VAIKM------IKEGSM-SEDEFIEEAKVMMNL 61
Query: 339 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H LV+L G C + +F++ EY+ NG L +LR R +++ D +EY
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL------TEVGSASLPTRLVGTFG 451
+ ++HRD+ + N L++ KV+DFGL++ T + P R
Sbjct: 121 LESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR------ 171
Query: 452 YMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+ PPE Y S K D++AFGV+++E+ S
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 37/232 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFG-IDKTATXRTVAVKMLKEGAT-----HSEHRALMSE 82
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSR---- 384
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYK 142
Query: 385 --------VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK--- 433
+ + A+G+E++ IHRD+ + NIL+ + K+ DFGL +
Sbjct: 143 DFLTLEHLIXYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARDIX 199
Query: 434 ----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
G A LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 200 KDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 135/296 (45%), Gaps = 50/296 (16%)
Query: 278 HKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE--FLAELKVL 335
+IG G FG V+ G + N K AIK + A E F+ E +V+
Sbjct: 14 QEIGSGQFGLVHL----GYWLNK------------DKVAIKTIREGAMSEEDFIEEAEVM 57
Query: 336 THVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARG 394
+ H LV+L G C+E + + LV E++E+G LS++LR + R + + + LD G
Sbjct: 58 MKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEG 116
Query: 395 LEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMP 454
+ Y+ E V IHRD+ + N L+ +N KV+DFG+T+ + T +
Sbjct: 117 MAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 173
Query: 455 PEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIE 514
PE + S K DV++FGV+++E+ S + + +S + +E
Sbjct: 174 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----------------EVVE 216
Query: 515 DLR---KLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSST 567
D+ +L PRL + Q+ C +E P+ RP+ ++ L ++ +
Sbjct: 217 DISTGFRLYKPRLAST-------HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 94/189 (49%), Gaps = 18/189 (9%)
Query: 311 LMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSE 369
+M + + D + R FL E+KV+ + H N+++ IG + L + EYI+ G L
Sbjct: 37 VMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRG 96
Query: 370 HLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADF 429
++ S PWS RV A D A G+ Y+H + IHRD+ S N L+ +N + VADF
Sbjct: 97 IIK-SMDSQYPWSQRVSFAKDIASGMAYLHSMNI---IHRDLNSHNCLVRENKNVVVADF 152
Query: 430 GLTKLT--------EVGSASLPTR-----LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVL 476
GL +L + S P R +VG +M PE KVDV++FG+VL
Sbjct: 153 GLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVL 212
Query: 477 YELISAKEA 485
E+I A
Sbjct: 213 CEIIGRVNA 221
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 112/233 (48%), Gaps = 38/233 (16%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D ++ +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-----HSEHRALMSE 81
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+ + +
Sbjct: 82 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLY 141
Query: 389 LD-------------SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
D A+G+E++ IHRD+ + NIL+ + K+ DFGL +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
G A LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 199 XKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 129/302 (42%), Gaps = 56/302 (18%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMD--MQASREFL 329
++ + K+G G FG V+ A K A+K M + FL
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKH----------------TKVAVKTMKPGSMSVEAFL 225
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGS--GRDPLPWSSRVQI 387
AE V+ + H LV+L + ++++ E++ G+L + L+ + PLP +
Sbjct: 226 AEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDF 283
Query: 388 ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLV 447
+ A G+ +I + YIHRD+++ANIL+ + K+ADFGL ++ A P +
Sbjct: 284 SAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARV----GAKFPIK-- 334
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+ PE +G + K DV++FG++L E+++ G + ++ E
Sbjct: 335 ----WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE----VIRALERGY 386
Query: 508 NLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSST 567
+P P +NCP + + + C + P+ RP+ I L +
Sbjct: 387 RMPRP-------------ENCPEE----LYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 429
Query: 568 TE 569
TE
Sbjct: 430 TE 431
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 111/230 (48%), Gaps = 35/230 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D ++ +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFG-IDKTATXRTVAVKMLKEGAT-----HSEHRALMSE 80
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSR---- 384
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF 140
Query: 385 ------VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK----- 433
+ + A+G+E++ IHRD+ + NIL+ + K+ DFGL +
Sbjct: 141 LTLEHLIXYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKIXDFGLARDIYKD 197
Query: 434 --LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
G A LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 198 PDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 111/230 (48%), Gaps = 35/230 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D ++ +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFG-IDKTATXRTVAVKMLKEGAT-----HSEHRALMSE 80
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ-- 386
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+ +
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF 140
Query: 387 --------IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK----- 433
+ A+G+E++ IHRD+ + NIL+ + K+ DFGL +
Sbjct: 141 LTLEHLICYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARDIYKD 197
Query: 434 --LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
G A LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 198 PDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 46/290 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMD--MQASREFL 329
++ + K+G G FG V+ A K A+K M + FL
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKH----------------TKVAVKTMKPGSMSVEAFL 58
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGS--GRDPLPWSSRVQI 387
AE V+ + H LV+L + ++++ E++ G+L + L+ + PLP +
Sbjct: 59 AEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDF 116
Query: 388 ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLV 447
+ A G+ +I + YIHRD+++ANIL+ + K+ADFGL ++ E +
Sbjct: 117 SAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 173
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+ PE +G + K DV++FG++L E+++ G + ++ E
Sbjct: 174 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE----VIRALERGY 229
Query: 508 NLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSI 557
+P P +NCP + + + C + P+ RP+ I
Sbjct: 230 RMPRP-------------ENCPEE----LYNIMMRCWKNRPEERPTFEYI 262
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 39/234 (16%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-----HSEHRALMSE 80
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWS------ 382
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140
Query: 383 --------SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK- 433
+ + A+G+E++ IHRD+ + NIL+ + K+ DFGL +
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 434 ------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
G A LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 198 IXKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 21/248 (8%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+ + + K+G GG VY AE ++ L+ + + + K+ + + F E
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAE------DTILNIKVAIKAIFIPPREKE---ETLKRFERE 61
Query: 332 LKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
+ + + H N+V +I E +LV EYIE LSE++ G PL + +
Sbjct: 62 VHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQ 119
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF 450
G+++ H+ + +HRDIK NILID N K+ DFG+ K S + ++GT
Sbjct: 120 ILDGIKHAHDMRI---VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLP 510
Y PE A+ D+Y+ G+VLYE++ + NG +A S + + + V P
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF---NGETAVSIAIKHIQDSV---P 230
Query: 511 DPIEDLRK 518
+ D+RK
Sbjct: 231 NVTTDVRK 238
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 39/234 (16%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-----HSEHRALMSE 82
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSR---- 384
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDL 142
Query: 385 ----------VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK- 433
+ + A+G+E++ IHRD+ + NIL+ + K+ DFGL +
Sbjct: 143 YKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARD 199
Query: 434 ------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
G A LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 200 IYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 39/234 (16%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-----HSEHRALMSE 71
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWS------ 382
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 383 --------SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK- 433
+ + A+G+E++ IHRD+ + NIL+ + K+ DFGL +
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 434 ------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
G A LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 189 IXKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 39/234 (16%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-----HSEHRALMSE 80
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWS------ 382
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140
Query: 383 --------SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK- 433
+ + A+G+E++ IHRD+ + NIL+ + K+ DFGL +
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 434 ------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
G A LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 198 IYKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 39/234 (16%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-----HSEHRALMSE 71
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWS------ 382
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 383 --------SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK- 433
+ + A+G+E++ IHRD+ + NIL+ + K+ DFGL +
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 434 ------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
G A LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 189 IXKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 126/274 (45%), Gaps = 32/274 (11%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + ++G G FG V+ G Y NS K A+K K + + FL
Sbjct: 13 ESIKLVKRLGAGQFGEVW----MGYYNNS------------TKVAVKTLKPGTMSVQAFL 56
Query: 330 AELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGS--GRDPLPWSSRVQ 386
E ++ + H LVRL E ++++ EY+ G+L + L+ G+ LP +
Sbjct: 57 EEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLID 114
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
+ A G+ YI YIHRD+++AN+L+ ++ K+ADFGL ++ E +
Sbjct: 115 FSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGA 171
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFE-- 504
+ PE +G + K DV++FG++LYE+++ + G ++ L +
Sbjct: 172 KFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMP 231
Query: 505 EVLNLPDPIEDLRKLVDPRLGDNCP----LDSVL 534
V N PD + D+ K+ + P L SVL
Sbjct: 232 RVENCPDELYDIMKMCWKEKAEERPTFDYLQSVL 265
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 39/234 (16%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-----HSEHRALMSE 117
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWS------ 382
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+
Sbjct: 118 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 177
Query: 383 --------SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK- 433
+ + A+G+E++ IHRD+ + NIL+ + K+ DFGL +
Sbjct: 178 YKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARD 234
Query: 434 ------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
G A LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 235 IYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 39/234 (16%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-----HSEHRALMSE 71
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWS------ 382
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 383 --------SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK- 433
+ + A+G+E++ IHRD+ + NIL+ + K+ DFGL +
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 434 ------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
G A LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 189 IYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 39/234 (16%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-----HSEHRALMSE 80
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWS------ 382
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140
Query: 383 --------SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK- 433
+ + A+G+E++ IHRD+ + NIL+ + K+ DFGL +
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 434 ------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
G A LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 198 IYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 136/307 (44%), Gaps = 60/307 (19%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREF---LA 330
++ IG GGFG VY A G+ + KAA D S+
Sbjct: 9 LTLEEIIGIGGFGKVYRAFWIGDE-------------VAVKAARHDPDEDISQTIENVRQ 55
Query: 331 ELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E K+ + H N++ L G C+ E +L LV E+ G L+ L G +P V A+
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAV 112
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDK--------NFHAKVADFGLT----KLTEV 437
ARG+ Y+H+ + IHRD+KS+NILI + N K+ DFGL + T++
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM 172
Query: 438 GSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSK 497
+A G + +M PE + S DV+++GV+L+EL++ E +G A +
Sbjct: 173 SAA-------GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG-EVPFRGIDGLAVAY 224
Query: 498 GLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSI 557
G VA+ + L +P CP A+L + C P RPS +I
Sbjct: 225 G-VAMNKLALPIP---------------STCP----EPFAKLMEDCWNPDPHSRPSFTNI 264
Query: 558 VVALMTL 564
+ L T+
Sbjct: 265 LDQLTTI 271
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 39/234 (16%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-----HSEHRALMSE 71
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWS------ 382
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 383 --------SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK- 433
+ + A+G+E++ IHRD+ + NIL+ + K+ DFGL +
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 434 ------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
G A LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 189 IYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 139/321 (43%), Gaps = 49/321 (15%)
Query: 263 SYEELSKATDNFS---------MSHKIGQGGFGAVYYAELR--GEYGNSYLSRLICVNLL 311
+YEE +A +F+ + IG G G V Y LR G+ R + V +
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQ-------RDVPVAIK 83
Query: 312 MQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEH 370
KA + + R+FL+E ++ H N++RL G G L +V EY+ENG+L
Sbjct: 84 ALKAGYTE---RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF 140
Query: 371 LRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFG 430
LR + V + G+ Y+ + Y+HRD+ + N+L+D N KV+DFG
Sbjct: 141 LR-THDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 431 LTKLTEVGSASLPTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
L+++ E + T G + PE + S DV++FGVV++E+++ E
Sbjct: 197 LSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY- 255
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
+ ++ +++ EE LP P+ CP + QL C +
Sbjct: 256 ---WNMTNRDVISSVEEGYRLPAPM-------------GCP----HALHQLMLDCWHKDR 295
Query: 549 QLRPSMRSIVVALMTLSSTTE 569
RP IV L L + E
Sbjct: 296 AQRPRFSQIVSVLDALIRSPE 316
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 131/285 (45%), Gaps = 47/285 (16%)
Query: 281 GQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTH--V 338
+G FG V+ A+L ++ A+K +Q + + +E ++ + +
Sbjct: 24 ARGRFGCVWKAQLMNDF-----------------VAVKIFPLQDKQSWQSEREIFSTPGM 66
Query: 339 HHLNLVRLI-----GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR 393
H NL++ I G +E L+L+ + + G+L+++L+G + + W+ +A +R
Sbjct: 67 KHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKG---NIITWNELCHVAETMSR 123
Query: 394 GLEYIHEHT--------VPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR 445
GL Y+HE P HRD KS N+L+ + A +ADFGL E G T
Sbjct: 124 GLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTH 183
Query: 446 -LVGTFGYMPPEYAQYG-----DVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGL 499
VGT YM PE + D ++D+YA G+VL+EL+S K D L
Sbjct: 184 GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSR----CKAADGPVDEYML 239
Query: 500 VALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCT 544
FEE + +E+L+++V + D LK LA++C
Sbjct: 240 P--FEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCV 282
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 139/321 (43%), Gaps = 49/321 (15%)
Query: 263 SYEELSKATDNFS---------MSHKIGQGGFGAVYYAELR--GEYGNSYLSRLICVNLL 311
+YEE +A +F+ + IG G G V Y LR G+ R + V +
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQ-------RDVPVAIK 83
Query: 312 MQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEH 370
KA + + R+FL+E ++ H N++RL G G L +V EY+ENG+L
Sbjct: 84 ALKAGYTE---RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF 140
Query: 371 LRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFG 430
LR + V + G+ Y+ + Y+HRD+ + N+L+D N KV+DFG
Sbjct: 141 LR-THDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 431 LTKLTEVGSASLPTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
L+++ E + T G + PE + S DV++FGVV++E+++ E
Sbjct: 197 LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY- 255
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
+ ++ +++ EE LP P+ CP + QL C +
Sbjct: 256 ---WNMTNRDVISSVEEGYRLPAPM-------------GCP----HALHQLMLDCWHKDR 295
Query: 549 QLRPSMRSIVVALMTLSSTTE 569
RP IV L L + E
Sbjct: 296 AQRPRFSQIVSVLDALIRSPE 316
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 117/234 (50%), Gaps = 47/234 (20%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-----FLAELK 333
KIGQG FG V+ A R QK A+KK+ M+ +E L E+K
Sbjct: 25 KIGQGTFGEVFKARHRKT---------------GQKVALKKVLMENEKEGFPITALREIK 69
Query: 334 VLTHVHHLNLVRLIGYC---------VEGSLFLVYEYIEN---GNLSEHLRGSGRDPLPW 381
+L + H N+V LI C +GS++LV+++ E+ G LS L + L
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL---VKFTLSE 126
Query: 382 SSRV-QIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSA 440
RV Q+ L+ GL YIH + + +HRD+K+AN+LI ++ K+ADFGL + +
Sbjct: 127 IKRVMQMLLN---GLYYIHRNKI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 441 SLPTRL---VGTFGYMPPE-YAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
S P R V T Y PPE D P +D++ G ++ E+ + + I++GN
Sbjct: 181 SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGN 233
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 124/254 (48%), Gaps = 50/254 (19%)
Query: 259 SVEFSY-EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAI 317
SVE + +E+SK + KIGQG FG V+ A R QK A+
Sbjct: 8 SVECPFCDEVSK----YEKLAKIGQGTFGEVFKARHRKT---------------GQKVAL 48
Query: 318 KKMDMQASRE-----FLAELKVLTHVHHLNLVRLIGYC---------VEGSLFLVYEYIE 363
KK+ M+ +E L E+K+L + H N+V LI C +GS++LV+++ E
Sbjct: 49 KKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE 108
Query: 364 N---GNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDK 420
+ G LS L + L RV L GL YIH + + +HRD+K+AN+LI +
Sbjct: 109 HDLAGLLSNVL---VKFTLSEIKRVMQML--LNGLYYIHRNKI---LHRDMKAANVLITR 160
Query: 421 NFHAKVADFGLTKLTEVGSASLPTRL---VGTFGYMPPE-YAQYGDVSPKVDVYAFGVVL 476
+ K+ADFGL + + S P R V T Y PPE D P +D++ G ++
Sbjct: 161 DGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM 220
Query: 477 YELISAKEAIVKGN 490
E+ + + I++GN
Sbjct: 221 AEMWT-RSPIMQGN 233
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 137/307 (44%), Gaps = 55/307 (17%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIK--KMDMQASREFL 329
++ + K+G G FG V+ G Y NS K A+K K + + FL
Sbjct: 12 ESIKLVKKLGAGQFGEVW----MGYYNNS------------TKVAVKTLKPGTMSVQAFL 55
Query: 330 AELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLSEHLRGS--GRDPLPWSSRVQ 386
E ++ + H LVRL E ++++ E++ G+L + L+ G+ LP +
Sbjct: 56 EEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLID 113
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
+ A G+ YI YIHRD+++AN+L+ ++ K+ADFGL ++ E +
Sbjct: 114 FSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGA 170
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS----SADSKGLVAL 502
+ PE +G + K +V++FG++LYE+++ + G + SA S+G
Sbjct: 171 KFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRM- 229
Query: 503 FEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALM 562
PR+ +NCP + + + K+C +E + RP+ + L
Sbjct: 230 -------------------PRM-ENCPDE----LYDIMKMCWKEKAEERPTFDYLQSVLD 265
Query: 563 TLSSTTE 569
+ TE
Sbjct: 266 DFYTATE 272
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 56 IGRGHFGCVYHGTLLDNDGK----KIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 107
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G++Y
Sbjct: 108 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKY 166
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 167 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--- 220
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 221 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGK----KIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 88
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G++Y
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKY 147
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 148 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK--- 201
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 202 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 114/233 (48%), Gaps = 45/233 (19%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-----FLAELK 333
KIGQG FG V+ A R QK A+KK+ M+ +E L E+K
Sbjct: 24 KIGQGTFGEVFKARHRKT---------------GQKVALKKVLMENEKEGFPITALREIK 68
Query: 334 VLTHVHHLNLVRLIGYC---------VEGSLFLVYEYIEN---GNLSEHLRGSGRDPLPW 381
+L + H N+V LI C +GS++LV+++ E+ G LS L + L
Sbjct: 69 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL---VKFTLSE 125
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
RV L GL YIH + + +HRD+K+AN+LI ++ K+ADFGL + + S
Sbjct: 126 IKRVMQML--LNGLYYIHRNKI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 180
Query: 442 LPTRL---VGTFGYMPPE-YAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
P R V T Y PPE D P +D++ G ++ E+ + + I++GN
Sbjct: 181 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGN 232
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 143/330 (43%), Gaps = 52/330 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRG-EYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
D ++ +G+G FG V AE G + + + V +L A K + + ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-----DLVS 89
Query: 331 ELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDP---------- 378
E++++ + H N++ L+G C + G L+++ EY GNL E+LR R P
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR-RPPGMEYSYDINR 148
Query: 379 -----LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+ + V ARG+EY+ IHRD+ + N+L+ +N K+ADFGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 434 -LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
+ + T +M PE + + DV++FGV+++E+ + + G
Sbjct: 206 DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-- 263
Query: 493 SADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRP 552
P+E+L KL+ + P + ++ + + C P RP
Sbjct: 264 -------------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 553 SMRSIVVAL---MTLSSTTEDWDVGSFYEN 579
+ + +V L +TL++ E D+ E
Sbjct: 305 TFKQLVEDLDRILTLTTNEEYLDLSQPLEQ 334
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 38/304 (12%)
Query: 266 ELSKATD--NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
E +K D N S+ +G G FG V L+ L +++ ++ + + Q
Sbjct: 25 EFAKELDATNISIDKVVGAGEFGEVCSGRLK-------LPSKKEISVAIKTLKVGYTEKQ 77
Query: 324 ASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWS 382
R+FL E ++ H N++RL G + + +V EY+ENG+L LR
Sbjct: 78 -RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVI 135
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
V + A G++Y+ + Y+HRD+ + NILI+ N KV+DFGL+++ E +
Sbjct: 136 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 192
Query: 443 PTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
T G + PE Y + DV+++G+VL+E++S E
Sbjct: 193 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE---------------- 236
Query: 501 ALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVA 560
+ E+ N +D+ K VD P+D + QL C Q+ RP IV
Sbjct: 237 RPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 291
Query: 561 LMTL 564
L L
Sbjct: 292 LDKL 295
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 57 IGRGHFGCVYHGTLLDNDGK----KIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 108
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G++Y
Sbjct: 109 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKY 167
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 168 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--- 221
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 222 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 143/330 (43%), Gaps = 52/330 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRG-EYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
D ++ +G+G FG V AE G + + + V +L A K + + ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-----DLVS 89
Query: 331 ELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDP---------- 378
E++++ + H N++ L+G C + G L+++ EY GNL E+LR R P
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR-RPPGMEXSYDINR 148
Query: 379 -----LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+ + V ARG+EY+ IHRD+ + N+L+ +N K+ADFGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 434 -LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
+ + T +M PE + + DV++FGV+++E+ + + G
Sbjct: 206 DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-- 263
Query: 493 SADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRP 552
P+E+L KL+ + P + ++ + + C P RP
Sbjct: 264 -------------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP 304
Query: 553 SMRSIVVAL---MTLSSTTEDWDVGSFYEN 579
+ + +V L +TL++ E D+ E
Sbjct: 305 TFKQLVEDLDRILTLTTNEEYLDLSQPLEQ 334
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGK----KIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G++Y
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKY 148
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 149 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--- 202
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 203 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 30 IGRGHFGCVYHGTLLDNDGK----KIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 81
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G++Y
Sbjct: 82 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKY 140
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 141 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--- 194
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 195 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 38/304 (12%)
Query: 266 ELSKATD--NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
E +K D N S+ +G G FG V L+ L +++ ++ + + Q
Sbjct: 8 EFAKELDATNISIDKVVGAGEFGEVCSGRLK-------LPSKKEISVAIKTLKVGYTEKQ 60
Query: 324 ASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWS 382
R+FL E ++ H N++RL G + + +V EY+ENG+L LR
Sbjct: 61 -RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVI 118
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
V + A G++Y+ + Y+HRD+ + NILI+ N KV+DFGL+++ E +
Sbjct: 119 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 443 PTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
T G + PE Y + DV+++G+VL+E++S E
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE---------------- 219
Query: 501 ALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVA 560
+ E+ N +D+ K VD P+D + QL C Q+ RP IV
Sbjct: 220 RPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 274
Query: 561 LMTL 564
L L
Sbjct: 275 LDKL 278
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 38/304 (12%)
Query: 266 ELSKATD--NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
E +K D N S+ +G G FG V L+ L +++ ++ + + Q
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLK-------LPSKKEISVAIKTLKVGYTEKQ 89
Query: 324 ASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWS 382
R+FL E ++ H N++RL G + + +V EY+ENG+L LR
Sbjct: 90 -RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVI 147
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
V + A G++Y+ + Y+HRD+ + NILI+ N KV+DFGL+++ E +
Sbjct: 148 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 443 PTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
T G + PE Y + DV+++G+VL+E++S E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE---------------- 248
Query: 501 ALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVA 560
+ E+ N +D+ K VD P+D + QL C Q+ RP IV
Sbjct: 249 RPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 561 LMTL 564
L L
Sbjct: 304 LDKL 307
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 38/304 (12%)
Query: 266 ELSKATD--NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
E +K D N S+ +G G FG V L+ L +++ ++ + + Q
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLK-------LPSKKEISVAIKTLKVGYTEKQ 89
Query: 324 ASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWS 382
R+FL E ++ H N++RL G + + +V EY+ENG+L LR
Sbjct: 90 -RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVI 147
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
V + A G++Y+ + Y+HRD+ + NILI+ N KV+DFGL+++ E +
Sbjct: 148 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 443 PTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
T G + PE Y + DV+++G+VL+E++S E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-------------- 250
Query: 501 ALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVA 560
+ E+ N +D+ K VD P+D + QL C Q+ RP IV
Sbjct: 251 --YWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 561 LMTL 564
L L
Sbjct: 304 LDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 38/304 (12%)
Query: 266 ELSKATD--NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
E +K D N S+ +G G FG V L+ L +++ ++ + + Q
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLK-------LPSKKEISVAIKTLKVGYTEKQ 89
Query: 324 ASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWS 382
R+FL E ++ H N++RL G + + +V EY+ENG+L LR
Sbjct: 90 -RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVI 147
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
V + A G++Y+ + Y+HRD+ + NILI+ N KV+DFGL+++ E +
Sbjct: 148 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 443 PTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
T G + PE Y + DV+++G+VL+E++S E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE---------------- 248
Query: 501 ALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVA 560
+ E+ N +D+ K VD P+D + QL C Q+ RP IV
Sbjct: 249 RPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 561 LMTL 564
L L
Sbjct: 304 LDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 38/304 (12%)
Query: 266 ELSKATD--NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
E +K D N S+ +G G FG V L+ L +++ ++ + + Q
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLK-------LPSKKEISVAIKTLKVGYTEKQ 89
Query: 324 ASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWS 382
R+FL E ++ H N++RL G + + +V EY+ENG+L LR
Sbjct: 90 -RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVI 147
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
V + A G++Y+ + Y+HRD+ + NILI+ N KV+DFGL+++ E +
Sbjct: 148 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 443 PTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
T G + PE Y + DV+++G+VL+E++S E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE---------------- 248
Query: 501 ALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVA 560
+ E+ N +D+ K VD P+D + QL C Q+ RP IV
Sbjct: 249 RPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 561 LMTL 564
L L
Sbjct: 304 LDKL 307
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 35 IGRGHFGCVYHGTLLDNDGK----KIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 86
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G++Y
Sbjct: 87 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKY 145
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 146 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--- 199
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 200 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 38/304 (12%)
Query: 266 ELSKATD--NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
E +K D N S+ +G G FG V L+ L +++ ++ + + Q
Sbjct: 35 EFAKELDATNISIDKVVGAGEFGEVCSGRLK-------LPSKKEISVAIKTLKVGYTEKQ 87
Query: 324 ASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWS 382
R+FL E ++ H N++RL G + + +V EY+ENG+L LR
Sbjct: 88 -RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVI 145
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
V + A G++Y+ + Y+HRD+ + NILI+ N KV+DFGL+++ E +
Sbjct: 146 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 202
Query: 443 PTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
T G + PE Y + DV+++G+VL+E++S E
Sbjct: 203 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-------------- 248
Query: 501 ALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVA 560
+ E+ N +D+ K VD P+D + QL C Q+ RP IV
Sbjct: 249 --YWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 301
Query: 561 LMTL 564
L L
Sbjct: 302 LDKL 305
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 142/326 (43%), Gaps = 64/326 (19%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRG-EYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
D ++ +G+G FG V AE G + + + V +L A K + + ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-----DLVS 89
Query: 331 ELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDP---------- 378
E++++ + H N++ L+G C + G L+++ EY GNL E+LR R P
Sbjct: 90 EMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRAR-RPPGMEYSYDINR 148
Query: 379 -----LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+ + V ARG+EY+ IHRD+ + N+L+ +N K+ADFGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 434 -------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAI 486
+ + LP + +M PE + + DV++FGV+++E+ + +
Sbjct: 206 DINNIDYYKKTTNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 487 VKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQE 546
G P+E+L KL+ + P + ++ + + C
Sbjct: 260 YPGI---------------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHA 298
Query: 547 YPQLRPSMRSIVVAL---MTLSSTTE 569
P RP+ + +V L +TL++ E
Sbjct: 299 VPSQRPTFKQLVEDLDRILTLTTNEE 324
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 144/326 (44%), Gaps = 57/326 (17%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V AE G +R+ V + M K+ + D+ + ++E
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIG-LDKDKPNRVTKVAVKMLKSDATEKDLS---DLISE 124
Query: 332 LKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWS------- 382
++++ + H N++ L+G C + G L+++ EY GNL E+L+ L +S
Sbjct: 125 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 184
Query: 383 -------SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
V A ARG+EY+ IHRD+ + N+L+ ++ K+ADFGL +
Sbjct: 185 EEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI 241
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ + LP + +M PE + + DV++FGV+L+E+ + +
Sbjct: 242 HHIDYYKKTTNGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 295
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G P+E+L KL+ + P + ++ + + C P
Sbjct: 296 GV---------------------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVP 334
Query: 549 QLRPSMRSIVVALMTLSSTTEDWDVG 574
RP+ + +V L + + T + ++G
Sbjct: 335 SQRPTFKQLVEDLDRIVALTSNQEMG 360
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGK----KIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G++Y
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKY 148
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 149 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--- 202
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 203 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGK----KIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 88
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G++Y
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKY 147
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 148 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--- 201
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 202 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGK----KIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 87
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G++Y
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKY 146
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 147 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--- 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 201 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 142/326 (43%), Gaps = 64/326 (19%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRG-EYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
D ++ +G+G FG V AE G + + + V +L A K + + ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-----DLVS 89
Query: 331 ELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDP---------- 378
E++++ + H N++ L+G C + G L+++ EY GNL E+LR R P
Sbjct: 90 EMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRAR-RPPGMEYSYDINR 148
Query: 379 -----LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+ + V ARG+EY+ IHRD+ + N+L+ +N K+ADFGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 434 -------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAI 486
+ + LP + +M PE + + DV++FGV+++E+ + +
Sbjct: 206 DINNIDYYKKTTNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 487 VKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQE 546
G P+E+L KL+ + P + ++ + + C
Sbjct: 260 YPGI---------------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHA 298
Query: 547 YPQLRPSMRSIVVAL---MTLSSTTE 569
P RP+ + +V L +TL++ E
Sbjct: 299 VPSQRPTFKQLVEDLDRILTLTTNEE 324
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGK----KIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 84
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G++Y
Sbjct: 85 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKY 143
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 144 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--- 197
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 198 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 132/304 (43%), Gaps = 38/304 (12%)
Query: 266 ELSKATD--NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
E +K D N S+ +G G FG V L+ L +++ ++ + + Q
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLK-------LPSKKEISVAIKTLKVGYTEKQ 89
Query: 324 ASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWS 382
R+FL E ++ H N++RL G + + +V EY+ENG+L LR
Sbjct: 90 -RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVI 147
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
V + A G++Y+ + Y+HRD+ + NILI+ N KV+DFGL ++ E +
Sbjct: 148 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA 204
Query: 443 PTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
T G + PE Y + DV+++G+VL+E++S E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE---------------- 248
Query: 501 ALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVA 560
+ E+ N +D+ K VD P+D + QL C Q+ RP IV
Sbjct: 249 RPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 561 LMTL 564
L L
Sbjct: 304 LDKL 307
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 19/230 (8%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
+F + +G G FG V+ R R + +L ++ ++ ++ + + E
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHN------GRYYAMKVLKKEIVVRLKQVEHTND---ER 57
Query: 333 KVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
+L+ V H ++R+ G + +F++ +YIE G L LR S R P P + A +
Sbjct: 58 LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY--AAEV 115
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFG 451
LEY+H + I+RD+K NIL+DKN H K+ DFG K + L GT
Sbjct: 116 CLALEYLHSKDI---IYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGTPD 168
Query: 452 YMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVA 501
Y+ PE + +D ++FG+++YE+++ N K L A
Sbjct: 169 YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA 218
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 141/326 (43%), Gaps = 64/326 (19%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRG-EYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
D ++ +G+G FG V AE G + + + V +L A K + + ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-----DLVS 89
Query: 331 ELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDP---------- 378
E++++ + H N++ L+G C + G L+++ EY GNL E+LR R P
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR-RPPGMEYSYDINR 148
Query: 379 -----LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+ + V ARG+EY+ IHRD+ + N+L+ +N K+ADFGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 434 -------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAI 486
+ LP + +M PE + + DV++FGV+++E+ + +
Sbjct: 206 DINNIDYYKNTTNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 487 VKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQE 546
G P+E+L KL+ + P + ++ + + C
Sbjct: 260 YPGI---------------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHA 298
Query: 547 YPQLRPSMRSIVVAL---MTLSSTTE 569
P RP+ + +V L +TL++ E
Sbjct: 299 VPSQRPTFKQLVEDLDRILTLTTNEE 324
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 61
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + + L+ +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYI 119
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 120 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVH---APSSRRTTLCG 173
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 97 IGRGHFGCVYHGTLLDNDGK----KIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 148
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G+++
Sbjct: 149 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKF 207
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 208 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK--- 261
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 262 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 38/289 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG G FG V L+ R ICV + KA + R+FL+E ++
Sbjct: 16 IGVGEFGEVCSGRLKVPG-----KREICVAIKTLKAGYTD---KQRRDFLSEASIMGQFD 67
Query: 340 HLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLR-GSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L G + + ++ EY+ENG+L LR GR + V + G++Y
Sbjct: 68 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKY 125
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT--FGYMPP 455
+ + + Y+HRD+ + NIL++ N KV+DFG++++ E + T G + P
Sbjct: 126 LSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 456 EYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIED 515
E Y + DV+++G+V++E++S E ++ ++ EE LP P+
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPY----WDMSNQDVIKAIEEGYRLPPPM-- 236
Query: 516 LRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
+CP + + QL C Q+ RP IV L L
Sbjct: 237 -----------DCP----IALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 142/326 (43%), Gaps = 64/326 (19%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRG-EYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
D ++ +G+G FG V AE G + + + V +L A K + + ++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-----DLVS 135
Query: 331 ELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDP---------- 378
E++++ + H N++ L+G C + G L+++ EY GNL E+LR R P
Sbjct: 136 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR-RPPGMEYSYDINR 194
Query: 379 -----LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+ + V ARG+EY+ IHRD+ + N+L+ +N K+ADFGL +
Sbjct: 195 VPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLAR 251
Query: 434 -------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAI 486
+ + LP + +M PE + + DV++FGV+++E+ + +
Sbjct: 252 DINNIDYYKKTTNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
Query: 487 VKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQE 546
G P+E+L KL+ + P + ++ + + C
Sbjct: 306 YPGI---------------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHA 344
Query: 547 YPQLRPSMRSIVVAL---MTLSSTTE 569
P RP+ + +V L +TL++ E
Sbjct: 345 VPSQRPTFKQLVEDLDRILTLTTNEE 370
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 266 ELSKATDN--FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
E +K D + IG G FG V L+ R ICV + KA +
Sbjct: 6 EFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPG-----KREICVAIKTLKAGYTD---K 57
Query: 324 ASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLR-GSGRDPLPW 381
R+FL+E ++ H N++ L G + + ++ EY+ENG+L LR GR +
Sbjct: 58 QRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV-- 115
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
V + G++Y+ + + Y+HRD+ + NIL++ N KV+DFG++++ E +
Sbjct: 116 IQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 172
Query: 442 LPTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGL 499
T G + PE Y + DV+++G+V++E++S E ++ +
Sbjct: 173 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY----WDMSNQDV 228
Query: 500 VALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVV 559
+ EE LP P+ +CP + + QL C Q+ RP IV
Sbjct: 229 IKAIEEGYRLPPPM-------------DCP----IALHQLMLDCWQKERSDRPKFGQIVN 271
Query: 560 ALMTL 564
L L
Sbjct: 272 MLDKL 276
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 142/326 (43%), Gaps = 64/326 (19%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRG-EYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
D ++ +G+G FG V AE G + + + V +L A K + + ++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-----DLVS 78
Query: 331 ELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDP---------- 378
E++++ + H N++ L+G C + G L+++ EY GNL E+LR R P
Sbjct: 79 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR-RPPGMEYSYDINR 137
Query: 379 -----LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+ + V ARG+EY+ IHRD+ + N+L+ +N K+ADFGL +
Sbjct: 138 VPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLAR 194
Query: 434 -------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAI 486
+ + LP + +M PE + + DV++FGV+++E+ + +
Sbjct: 195 DINNIDYYKKTTNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 248
Query: 487 VKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQE 546
G P+E+L KL+ + P + ++ + + C
Sbjct: 249 YPGI---------------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHA 287
Query: 547 YPQLRPSMRSIVVAL---MTLSSTTE 569
P RP+ + +V L +TL++ E
Sbjct: 288 VPSQRPTFKQLVEDLDRILTLTTNEE 313
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGK----KIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 90
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G+++
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKF 149
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 150 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK--- 203
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 204 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 142/326 (43%), Gaps = 64/326 (19%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRG-EYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
D ++ +G+G FG V AE G + + + V +L A K + + ++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-----DLVS 81
Query: 331 ELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDP---------- 378
E++++ + H N++ L+G C + G L+++ EY GNL E+LR R P
Sbjct: 82 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR-RPPGMEYSYDINR 140
Query: 379 -----LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+ + V ARG+EY+ IHRD+ + N+L+ +N K+ADFGL +
Sbjct: 141 VPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLAR 197
Query: 434 -------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAI 486
+ + LP + +M PE + + DV++FGV+++E+ + +
Sbjct: 198 DINNIDYYKKTTNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 251
Query: 487 VKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQE 546
G P+E+L KL+ + P + ++ + + C
Sbjct: 252 YPGI---------------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHA 290
Query: 547 YPQLRPSMRSIVVAL---MTLSSTTE 569
P RP+ + +V L +TL++ E
Sbjct: 291 VPSQRPTFKQLVEDLDRILTLTTNEE 316
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 132/304 (43%), Gaps = 38/304 (12%)
Query: 266 ELSKATD--NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
E +K D N S+ +G G FG V L+ L +++ ++ + + Q
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLK-------LPSKKEISVAIKTLKVGYTEKQ 89
Query: 324 ASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWS 382
R+FL E ++ H N++RL G + + +V EY+ENG+L LR
Sbjct: 90 -RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVI 147
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
V + A G++Y+ + Y+HRD+ + NILI+ N KV+DFGL ++ E +
Sbjct: 148 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204
Query: 443 PTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
T G + PE Y + DV+++G+VL+E++S E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-------------- 250
Query: 501 ALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVA 560
+ E+ N +D+ K VD P+D + QL C Q+ RP IV
Sbjct: 251 --YWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 561 LMTL 564
L L
Sbjct: 304 LDKL 307
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 36 IGRGHFGCVYHGTLLDNDG----KKIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 87
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G+++
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKF 146
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 147 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK--- 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 201 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 142/326 (43%), Gaps = 64/326 (19%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRG-EYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
D ++ +G+G FG V AE G + + + V +L A K + + ++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-----DLVS 76
Query: 331 ELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDP---------- 378
E++++ + H N++ L+G C + G L+++ EY GNL E+LR R P
Sbjct: 77 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR-RPPGMEYSYDINR 135
Query: 379 -----LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+ + V ARG+EY+ IHRD+ + N+L+ +N K+ADFGL +
Sbjct: 136 VPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLTARNVLVTENNVMKIADFGLAR 192
Query: 434 -------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAI 486
+ + LP + +M PE + + DV++FGV+++E+ + +
Sbjct: 193 DINNIDYYKKTTNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 246
Query: 487 VKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQE 546
G P+E+L KL+ + P + ++ + + C
Sbjct: 247 YPGI---------------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHA 285
Query: 547 YPQLRPSMRSIVVAL---MTLSSTTE 569
P RP+ + +V L +TL++ E
Sbjct: 286 VPSQRPTFKQLVEDLDRILTLTTNQE 311
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGK----KIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 90
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G+++
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKF 149
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 150 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK--- 203
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 204 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 38 IGRGHFGCVYHGTLLDNDG----KKIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G+++
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKF 148
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 149 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK--- 202
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 203 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 142/326 (43%), Gaps = 64/326 (19%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRG-EYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
D ++ +G+G FG V AE G + + + V +L A K + + ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-----DLVS 89
Query: 331 ELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDP---------- 378
E++++ + H N++ L+G C + G L+++ EY GNL E+LR R P
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR-RPPGMEYSYDINR 148
Query: 379 -----LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+ + V ARG+EY+ IHRD+ + N+L+ +N ++ADFGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMRIADFGLAR 205
Query: 434 -------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAI 486
+ + LP + +M PE + + DV++FGV+++E+ + +
Sbjct: 206 DINNIDYYKKTTNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 487 VKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQE 546
G P+E+L KL+ + P + ++ + + C
Sbjct: 260 YPGI---------------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHA 298
Query: 547 YPQLRPSMRSIVVAL---MTLSSTTE 569
P RP+ + +V L +TL++ E
Sbjct: 299 VPSQRPTFKQLVEDLDRILTLTTNEE 324
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 112/245 (45%), Gaps = 20/245 (8%)
Query: 242 GPAAGTPTSLNAITVDKSVEFSYEELSKATD-NFSMSHKIGQGGFGAVYYAELRGEYGNS 300
G P A T+ K + K TD NF M +G+G FG V +E +G
Sbjct: 312 GQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMV--LGKGSFGKVMLSERKG----- 364
Query: 301 YLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVE--GSLFLV 358
L V +L + I+ D++ + + E +VL + + C + L+ V
Sbjct: 365 -TDELYAVKILKKDVVIQDDDVECT---MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420
Query: 359 YEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILI 418
EY+ G+L H++ GR P + V A + A GL ++ + I+RD+K N+++
Sbjct: 421 MEYVNGGDLMYHIQQVGRFKEPHA--VFYAAEIAIGLFFLQSKGI---IYRDLKLDNVML 475
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYE 478
D H K+ADFG+ K + GT Y+ PE Y VD +AFGV+LYE
Sbjct: 476 DSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 534
Query: 479 LISAK 483
+++ +
Sbjct: 535 MLAGQ 539
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 20/211 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D+F + +G+G FG VY A E N + ++ + +L K+ ++K ++ + E
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAR---EKQNKF---IMALKVLF-KSQLEKEGVE--HQLRRE 64
Query: 332 LKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
+++ +H+ H N++R+ Y + ++L+ E+ G L + L+ GR S+ L
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL- 123
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR-LVGT 449
A L Y HE V IHRDIK N+L+ K+ADFG + V + SL R + GT
Sbjct: 124 -ADALHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGT 175
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
Y+PPE + KVD++ GV+ YE +
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL 206
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 20/211 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D+F + +G+G FG VY A E N + ++ + +L K+ ++K ++ + E
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAR---EKQNKF---IMALKVLF-KSQLEKEGVE--HQLRRE 65
Query: 332 LKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
+++ +H+ H N++R+ Y + ++L+ E+ G L + L+ GR S+ L
Sbjct: 66 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL- 124
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR-LVGT 449
A L Y HE V IHRDIK N+L+ K+ADFG + V + SL R + GT
Sbjct: 125 -ADALHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGT 176
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
Y+PPE + KVD++ GV+ YE +
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL 207
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 141/325 (43%), Gaps = 62/325 (19%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D ++ +G+G FG V AE G + V + M K + D+ + ++E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVG-IDKDKPKEAVTVAVKMLKDDATEEDLS---DLVSE 90
Query: 332 LKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDP----------- 378
++++ + H N++ L+G C + G L+++ EY GNL E+LR R P
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR-RPPGMEYSYDINRV 149
Query: 379 ----LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK- 433
+ + V ARG+EY+ IHRD+ + N+L+ +N K+ADFGL +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 434 ------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIV 487
+ + LP + +M PE + + DV++FGV+++E+ + +
Sbjct: 207 INNIDYYKKTTNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 488 KGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEY 547
G P+E+L KL+ + P + ++ + + C
Sbjct: 261 PGI---------------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 548 PQLRPSMRSIVVAL---MTLSSTTE 569
P RP+ + +V L +TL++ E
Sbjct: 300 PSQRPTFKQLVEDLDRILTLTTNEE 324
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGK----KIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G+++
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKF 148
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 149 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK--- 202
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 203 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG+G FG VY+ L G ++ C K+ + D+ +FL E ++
Sbjct: 43 IGRGHFGCVYHGTLLDNDGK----KIHCA----VKSLNRITDIGEVSQFLTEGIIMKDFS 94
Query: 340 HLNLVRLIGYCV--EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N++ L+G C+ EGS +V Y+++G+L +R +P + L A+G+++
Sbjct: 95 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKF 153
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---------LTEVGSASLPTRLVG 448
+ ++HRD+ + N ++D+ F KVADFGL + + A LP +
Sbjct: 154 LASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK--- 207
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+M E Q + K DV++FGV+L+EL++
Sbjct: 208 ---WMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 47/316 (14%)
Query: 262 FSYEELSKATDNFS---------MSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLM 312
F++E+ ++A F+ + IG G FG V L+ R ICV +
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPG-----KREICVAIKT 64
Query: 313 QKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHL 371
KA + R+FL+E ++ H N++ L G + + ++ EY+ENG+L L
Sbjct: 65 LKAGYTD---KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 121
Query: 372 R-GSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFG 430
R GR + V + G++Y+ + + +HRD+ + NIL++ N KV+DFG
Sbjct: 122 RKNDGRFTV--IQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFG 176
Query: 431 LTKLTEVGSASLPTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
++++ E + T G + PE Y + DV+++G+V++E++S E
Sbjct: 177 MSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY- 235
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
++ ++ EE LP P+ +CP + + QL C Q+
Sbjct: 236 ---WDMSNQDVIKAIEEGYRLPPPM-------------DCP----IALHQLMLDCWQKER 275
Query: 549 QLRPSMRSIVVALMTL 564
RP IV L L
Sbjct: 276 SDRPKFGQIVNMLDKL 291
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 133/304 (43%), Gaps = 38/304 (12%)
Query: 266 ELSKATD--NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
E +K D N S+ +G G FG V L+ L +++ ++ + + Q
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLK-------LPSKKEISVAIKTLKVGYTEKQ 89
Query: 324 ASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWS 382
R+FL E ++ H N++RL G + + +V EY+ENG+L LR
Sbjct: 90 -RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVI 147
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
V + A G++Y+ + ++HRD+ + NILI+ N KV+DFGL+++ E +
Sbjct: 148 QLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 443 PTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
T G + PE Y + DV+++G+VL+E++S E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE---------------- 248
Query: 501 ALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVA 560
+ E+ N +D+ K VD P+D + QL C Q+ RP IV
Sbjct: 249 RPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 561 LMTL 564
L L
Sbjct: 304 LDKL 307
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 123/254 (48%), Gaps = 50/254 (19%)
Query: 259 SVEFSY-EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAI 317
SVE + +E+SK + KIGQG FG V+ A R QK A+
Sbjct: 8 SVECPFCDEVSK----YEKLAKIGQGTFGEVFKARHRKT---------------GQKVAL 48
Query: 318 KKMDMQASRE-----FLAELKVLTHVHHLNLVRLIGYC---------VEGSLFLVYEYIE 363
KK+ M+ +E L E+K+L + H N+V LI C + S++LV+++ E
Sbjct: 49 KKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCE 108
Query: 364 N---GNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDK 420
+ G LS L + L RV L GL YIH + + +HRD+K+AN+LI +
Sbjct: 109 HDLAGLLSNVL---VKFTLSEIKRVMQML--LNGLYYIHRNKI---LHRDMKAANVLITR 160
Query: 421 NFHAKVADFGLTKLTEVGSASLPTRL---VGTFGYMPPE-YAQYGDVSPKVDVYAFGVVL 476
+ K+ADFGL + + S P R V T Y PPE D P +D++ G ++
Sbjct: 161 DGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM 220
Query: 477 YELISAKEAIVKGN 490
E+ + + I++GN
Sbjct: 221 AEMWT-RSPIMQGN 233
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F + +G+G FG VY A R S+ I ++ K ++K ++ + E
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQ-------SKFILALKVLFKTQLEKAGVE--HQLRRE 62
Query: 332 LKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
+++ +H+ H N++RL GY + + ++L+ EY G + L+ R +
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITE 120
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF 450
A L Y H V IHRDIK N+L+ N K+ADFG + +S T L GT
Sbjct: 121 LANALSYCHSKRV---IHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTLCGTL 174
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
Y+PPE + KVD+++ GV+ YE +
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 204
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 82
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 140
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 141 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCG 194
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 56
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 114
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 115 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVH---APSSRRTELCG 168
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 20/211 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D+F + +G+G FG VY A E N + ++ + +L K+ ++K ++ + E
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAR---EKQNKF---IMALKVLF-KSQLEKEGVE--HQLRRE 64
Query: 332 LKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
+++ +H+ H N++R+ Y + ++L+ E+ G L + L+ GR S+ L
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL- 123
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR-LVGT 449
A L Y HE V IHRDIK N+L+ K+ADFG + V + SL R + GT
Sbjct: 124 -ADALHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGT 175
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
Y+PPE + KVD++ GV+ YE +
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL 206
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 61
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 119
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 120 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVH---APSSRRTTLCG 173
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 174 TLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 141/317 (44%), Gaps = 53/317 (16%)
Query: 262 FSYEELSKATDNFS---------MSHKIGQGGFGAVYYAELR--GEYGNSYLSRLICVNL 310
F++E+ ++A F+ + IG G FG V L+ G+ R I V +
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGK-------REIFVAI 66
Query: 311 LMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSE 369
K+ + + R+FL+E ++ H N++ L G + + + ++ E++ENG+L
Sbjct: 67 KTLKSGYTE---KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 370 HLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADF 429
LR + V + A G++Y+ + Y+HRD+ + NIL++ N KV+DF
Sbjct: 124 FLRQNDGQ-FTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDF 179
Query: 430 GLTKLTEVGSASLPTRLVGTFGYMP-----PEYAQYGDVSPKVDVYAFGVVLYELISAKE 484
GL++ E S PT G +P PE QY + DV+++G+V++E++S E
Sbjct: 180 GLSRFLE-DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 238
Query: 485 AIVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCT 544
++ ++ E+ LP P++ CP + QL C
Sbjct: 239 RPY----WDMTNQDVINAIEQDYRLPPPMD-------------CP----SALHQLMLDCW 277
Query: 545 QEYPQLRPSMRSIVVAL 561
Q+ RP IV L
Sbjct: 278 QKDRNHRPKFGQIVNTL 294
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 125/289 (43%), Gaps = 42/289 (14%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG G FG V L+ CV + K + + REFL+E ++
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKES-----CVAIKTLKGGYTE---RQRREFLSEASIMGQFE 75
Query: 340 HLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLR-GSGRDPLPWSSRVQIALDSARGLEY 397
H N++RL G + ++ E++ENG L LR G+ + V + A G+ Y
Sbjct: 76 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRY 133
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMP--- 454
+ E + Y+HRD+ + NIL++ N KV+DFGL++ E S+ PT G +P
Sbjct: 134 LAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD-PTETSSLGGKIPIRW 189
Query: 455 --PEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDP 512
PE + + D +++G+V++E++S E ++ ++ E+ LP P
Sbjct: 190 TAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY----WDMSNQDVINAIEQDYRLPPP 245
Query: 513 IEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
+CP + QL C Q+ RP +V AL
Sbjct: 246 -------------PDCP----TSLHQLMLDCWQKDRNARPRFPQVVSAL 277
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 73
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 74 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 131
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 132 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVH---APSSRRTTLCG 185
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 186 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 56
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 114
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 115 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCG 168
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 59
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 117
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 118 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCG 171
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 141/326 (43%), Gaps = 64/326 (19%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRG-EYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
D ++ +G+G FG V AE G + + + V +L A K + + ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-----DLVS 89
Query: 331 ELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDP---------- 378
E++++ + H N++ L+G C + G L+++ Y GNL E+LR R P
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRAR-RPPGMEYSYDINR 148
Query: 379 -----LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+ + V ARG+EY+ IHRD+ + N+L+ +N K+ADFGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 434 -------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAI 486
+ + LP + +M PE + + DV++FGV+++E+ + +
Sbjct: 206 DINNIDYYKKTTNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 487 VKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQE 546
G P+E+L KL+ + P + ++ + + C
Sbjct: 260 YPGI---------------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHA 298
Query: 547 YPQLRPSMRSIVVAL---MTLSSTTE 569
P RP+ + +V L +TL++ E
Sbjct: 299 VPSQRPTFKQLVEDLDRILTLTTNEE 324
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 61
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 119
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 120 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCG 173
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 57
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 115
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 116 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCG 169
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 144/328 (43%), Gaps = 60/328 (18%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V AE G +R+ V + M K+ + D+ + ++E
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIG-LDKDKPNRVTKVAVKMLKSDATEKDLS---DLISE 83
Query: 332 LKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWS------- 382
++++ + H N++ L+G C + G L+++ EY GNL E+L+ L +S
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNP 143
Query: 383 -------SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
V A ARG+EY+ IHRD+ + N+L+ ++ K+ADFGL +
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ + LP + +M PE + + DV++FGV+L+E+ + +
Sbjct: 201 HHIDXXKKTTNGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 254
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G P+E+L KL+ + P + ++ + + C P
Sbjct: 255 GV---------------------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVP 293
Query: 549 QLRPSMRSIVVAL---MTLSSTTEDWDV 573
RP+ + +V L + L+S E D+
Sbjct: 294 SQRPTFKQLVEDLDRIVALTSNQEXLDL 321
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 56
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 114
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 115 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCG 168
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 56
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 114
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 115 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCG 168
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 61
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + + L+ +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYI 119
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S L G
Sbjct: 120 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVH---APSSRRXXLXG 173
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 118/271 (43%), Gaps = 32/271 (11%)
Query: 295 GEYGNSYLSRLICVNLLMQKAAIKKMDM----QASREFLAELKVLTHVHHLNLVRLIGYC 350
GE+G RL AIK + + + R+FL E ++ H N+V L G
Sbjct: 54 GEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVV 113
Query: 351 VEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHR 409
G + +V E++ENG L LR V + A G+ Y+ + Y+HR
Sbjct: 114 TRGKPVMIVIEFMENGALDAFLRKHD-GQFTVIQLVGMLRGIAAGMRYLADMG---YVHR 169
Query: 410 DIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF--GYMPPEYAQYGDVSPKV 467
D+ + NIL++ N KV+DFGL+++ E ++ T G + PE QY +
Sbjct: 170 DLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSAS 229
Query: 468 DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDN 527
DV+++G+V++E++S E ++ ++ EE LP P+ +
Sbjct: 230 DVWSYGIVMWEVMSYGERPY----WDMSNQDVIKAIEEGYRLPAPM-------------D 272
Query: 528 CPLDSVLKMAQLAKVCTQEYPQLRPSMRSIV 558
CP + QL C Q+ RP IV
Sbjct: 273 CPAG----LHQLMLDCWQKERAERPKFEQIV 299
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 132/304 (43%), Gaps = 38/304 (12%)
Query: 266 ELSKATD--NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
E +K D N S+ +G G FG V L+ L +++ ++ + + Q
Sbjct: 8 EFAKELDATNISIDKVVGAGEFGEVCSGRLK-------LPSKKEISVAIKTLKVGYTEKQ 60
Query: 324 ASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWS 382
R+FL E ++ H N++RL G + + +V E +ENG+L LR
Sbjct: 61 -RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVI 118
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
V + A G++Y+ + Y+HRD+ + NILI+ N KV+DFGL+++ E +
Sbjct: 119 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 443 PTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
T G + PE Y + DV+++G+VL+E++S E
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE---------------- 219
Query: 501 ALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVA 560
+ E+ N +D+ K VD P+D + QL C Q+ RP IV
Sbjct: 220 RPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 274
Query: 561 LMTL 564
L L
Sbjct: 275 LDKL 278
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 56
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 114
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 115 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCG 168
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 61
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 119
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 120 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCG 173
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 55
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 56 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 113
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 114 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCG 167
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 168 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 60
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 118
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 119 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCG 172
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 141/326 (43%), Gaps = 64/326 (19%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRG-EYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
D ++ +G+G FG V AE G + + + V +L A K + + ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-----DLVS 89
Query: 331 ELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDP---------- 378
E++++ + H N++ L+G C + G L+++ Y GNL E+LR R P
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRAR-RPPGMEYSYDINR 148
Query: 379 -----LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+ + V ARG+EY+ IHRD+ + N+L+ +N K+ADFGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 434 -------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAI 486
+ + LP + +M PE + + DV++FGV+++E+ + +
Sbjct: 206 DINNIDYYKKTTNGRLPVK------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 487 VKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQE 546
G P+E+L KL+ + P + ++ + + C
Sbjct: 260 YPGI---------------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHA 298
Query: 547 YPQLRPSMRSIVVAL---MTLSSTTE 569
P RP+ + +V L +TL++ E
Sbjct: 299 VPSQRPTFKQLVEDLDRILTLTTNEE 324
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 125/289 (43%), Gaps = 42/289 (14%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG G FG V L+ CV + K + + REFL+E ++
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKES-----CVAIKTLKGGYTE---RQRREFLSEASIMGQFE 73
Query: 340 HLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLR-GSGRDPLPWSSRVQIALDSARGLEY 397
H N++RL G + ++ E++ENG L LR G+ + V + A G+ Y
Sbjct: 74 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRY 131
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMP--- 454
+ E + Y+HRD+ + NIL++ N KV+DFGL++ E S+ PT G +P
Sbjct: 132 LAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD-PTYTSSLGGKIPIRW 187
Query: 455 --PEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDP 512
PE + + D +++G+V++E++S E ++ ++ E+ LP P
Sbjct: 188 TAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY----WDMSNQDVINAIEQDYRLPPP 243
Query: 513 IEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
+CP + QL C Q+ RP +V AL
Sbjct: 244 -------------PDCPTS----LHQLMLDCWQKDRNARPRFPQVVSAL 275
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 17/217 (7%)
Query: 266 ELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS 325
++ ++F + +G+G FG V+ AE + ++ + L + + D++ +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKK------TNQFFAIKALKKDVVLMDDDVECT 65
Query: 326 REFLAELKVLTHV-HHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
+ E +VL+ H L + + + +LF V EY+ G+L H++ + L S
Sbjct: 66 ---MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDL--SR 120
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
A + GL+++H + ++RD+K NIL+DK+ H K+ADFG+ K +G A
Sbjct: 121 ATFYAAEIILGLQFLHSKGI---VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-T 176
Query: 444 TRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
GT Y+ PE + VD ++FGV+LYE++
Sbjct: 177 NEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 213
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 269 KATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREF 328
++ + + KIG+G FG + E G Y+ +++ I +M + E
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVK-STEDGRQYV---------IKEINISRMSSKEREES 70
Query: 329 LAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSG------RDPLPW 381
E+ VL ++ H N+V+ E GSL++V +Y E G+L + + L W
Sbjct: 71 RREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW 130
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
VQI L L+++H+ + +HRDIKS NI + K+ ++ DFG+ ++ +
Sbjct: 131 F--VQICL----ALKHVHDRKI---LHRDIKSQNIFLTKDGTVQLGDFGIARVLN-STVE 180
Query: 442 LPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
L +GT Y+ PE + + K D++A G VLYEL + K A G+
Sbjct: 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 132/304 (43%), Gaps = 38/304 (12%)
Query: 266 ELSKATD--NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
E +K D N S+ +G G FG V L+ L +++ ++ + + Q
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLK-------LPSKKEISVAIKTLKVGYTEKQ 89
Query: 324 ASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWS 382
R+FL E ++ H N++RL G + + +V E +ENG+L LR
Sbjct: 90 -RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVI 147
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
V + A G++Y+ + Y+HRD+ + NILI+ N KV+DFGL+++ E +
Sbjct: 148 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 443 PTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
T G + PE Y + DV+++G+VL+E++S E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE---------------- 248
Query: 501 ALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVA 560
+ E+ N +D+ K VD P+D + QL C Q+ RP IV
Sbjct: 249 RPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 561 LMTL 564
L L
Sbjct: 304 LDKL 307
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 22/219 (10%)
Query: 269 KATD-NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
K TD NF M +G+G FG V A+ +G L + +L + I+ D++ +
Sbjct: 17 KLTDFNFLMV--LGKGSFGKVMLADRKG------TEELYAIKILKKDVVIQDDDVECT-- 66
Query: 328 FLAELKVLTHVHHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRV 385
+ E +VL + + + C + L+ V EY+ G+L H++ G+ P + V
Sbjct: 67 -MVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQA--V 123
Query: 386 QIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR 445
A + + GL ++H+ + I+RD+K N+++D H K+ADFG+ K E + TR
Sbjct: 124 FYAAEISIGLFFLHKRGI---IYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTR 178
Query: 446 -LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
GT Y+ PE Y VD +A+GV+LYE+++ +
Sbjct: 179 EFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 147/332 (44%), Gaps = 65/332 (19%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
M +IG+G +G V+ + RGE K A+K + E
Sbjct: 38 QIQMVKQIGKGRYGEVWMGKWRGE-----------------KVAVKVFFTTEEASWFRET 80
Query: 333 KVLTHV--HHLNLVRLIGYCVEGS-----LFLVYEYIENGNLSEHLRGSGRDPLPWSSRV 385
++ V H N++ I ++G+ L+L+ +Y ENG+L ++L+ + D S +
Sbjct: 81 EIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDA---KSML 137
Query: 386 QIALDSARGLEYIHEHTV-----PVYIHRDIKSANILIDKNFHAKVADFGLTK--LTEVG 438
++A S GL ++H P HRD+KS NIL+ KN +AD GL +++
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTN 197
Query: 439 SASLP--TRLVGTFGYMPPEY------AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+P TR VGT YMPPE + D+Y+FG++L+E+ A+ +
Sbjct: 198 EVDIPPNTR-VGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCV---- 250
Query: 491 GSSADSKGLVALFE---EVLNLPDP-IEDLRKLV-----DPRLGDNCPLDSVLKMAQLAK 541
S G+V ++ L DP ED+R++V P + D L+ Q+ K
Sbjct: 251 -----SGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLR--QMGK 303
Query: 542 VCTQEYPQLRPSMRSIVVALMTLSSTTEDWDV 573
+ T+ + S + + TL+ +E D+
Sbjct: 304 LMTECWAHNPASRLTALRVKKTLAKMSESQDI 335
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 59
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 117
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 118 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCG 171
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 57
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 115
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 116 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSC---HAPSSRRTTLSG 169
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 140/320 (43%), Gaps = 57/320 (17%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V AE G +R+ V + M K+ + D+ + ++E
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIG-LDKDKPNRVTKVAVKMLKSDATEKDLS---DLISE 75
Query: 332 LKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWS------- 382
++++ + H N++ L+G C + G L+++ EY GNL E+L+ L +S
Sbjct: 76 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 135
Query: 383 -------SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
V A ARG+EY+ IHRD+ + N+L+ ++ K+ADFGL +
Sbjct: 136 EEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI 192
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ + LP + +M PE + + DV++FGV+L+E+ + +
Sbjct: 193 HHIDYYKKTTNGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 246
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G P+E+L KL+ + P + ++ + + C P
Sbjct: 247 GV---------------------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVP 285
Query: 549 QLRPSMRSIVVALMTLSSTT 568
RP+ + +V L + + T
Sbjct: 286 SQRPTFKQLVEDLDRIVALT 305
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 137/317 (43%), Gaps = 55/317 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
N ++ +G G FG VY ++ G N + V L + + Q +FL E
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSG-MPNDPSPLQVAVKTLPEVCS-----EQDELDFLMEA 99
Query: 333 KVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSGRDPLPWSSR-----VQ 386
+++ ++H N+VR IG ++ F++ E + G+L LR + P SS +
Sbjct: 100 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTK-------LTE 436
+A D A G +Y+ E+ +IHRDI + N L+ AK+ DFG+ + +
Sbjct: 160 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADS 496
G A LP + +MPPE G + K D ++FGV+L+E+ S +
Sbjct: 217 GGCAMLPVK------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---- 266
Query: 497 KGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRS 556
+EVL + ++ P+ NCP M Q C Q P+ RP +
Sbjct: 267 -------QEVLEF---VTSGGRMDPPK---NCPGPVYRIMTQ----CWQHQPEDRP---N 306
Query: 557 IVVALMTLSSTTEDWDV 573
+ L + T+D DV
Sbjct: 307 FAIILERIEYCTQDPDV 323
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 140/320 (43%), Gaps = 57/320 (17%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V AE G +R+ V + M K+ + D+ + ++E
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIG-LDKDKPNRVTKVAVKMLKSDATEKDLS---DLISE 72
Query: 332 LKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWS------- 382
++++ + H N++ L+G C + G L+++ EY GNL E+L+ L +S
Sbjct: 73 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 132
Query: 383 -------SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
V A ARG+EY+ IHRD+ + N+L+ ++ K+ADFGL +
Sbjct: 133 EEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI 189
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ + LP + +M PE + + DV++FGV+L+E+ + +
Sbjct: 190 HHIDYYKKTTNGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 243
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G P+E+L KL+ + P + ++ + + C P
Sbjct: 244 GV---------------------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVP 282
Query: 549 QLRPSMRSIVVALMTLSSTT 568
RP+ + +V L + + T
Sbjct: 283 SQRPTFKQLVEDLDRIVALT 302
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 140/320 (43%), Gaps = 57/320 (17%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V AE G +R+ V + M K+ + D+ + ++E
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIG-LDKDKPNRVTKVAVKMLKSDATEKDLS---DLISE 83
Query: 332 LKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWS------- 382
++++ + H N++ L+G C + G L+++ EY GNL E+L+ L +S
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNP 143
Query: 383 -------SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
V A ARG+EY+ IHRD+ + N+L+ ++ K+ADFGL +
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ + LP + +M PE + + DV++FGV+L+E+ + +
Sbjct: 201 HHIDYYKKTTNGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 254
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G P+E+L KL+ + P + ++ + + C P
Sbjct: 255 GV---------------------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVP 293
Query: 549 QLRPSMRSIVVALMTLSSTT 568
RP+ + +V L + + T
Sbjct: 294 SQRPTFKQLVEDLDRIVALT 313
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 137/317 (43%), Gaps = 55/317 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
N ++ +G G FG VY ++ G N + V L + + Q +FL E
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSG-MPNDPSPLQVAVKTLPEVCS-----EQDELDFLMEA 85
Query: 333 KVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSGRDPLPWSSR-----VQ 386
+++ ++H N+VR IG ++ F++ E + G+L LR + P SS +
Sbjct: 86 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTK-------LTE 436
+A D A G +Y+ E+ +IHRDI + N L+ AK+ DFG+ + +
Sbjct: 146 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADS 496
G A LP + +MPPE G + K D ++FGV+L+E+ S +
Sbjct: 203 GGCAMLPVK------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---- 252
Query: 497 KGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRS 556
+EVL + ++ P+ NCP M Q C Q P+ RP +
Sbjct: 253 -------QEVLEF---VTSGGRMDPPK---NCPGPVYRIMTQ----CWQHQPEDRP---N 292
Query: 557 IVVALMTLSSTTEDWDV 573
+ L + T+D DV
Sbjct: 293 FAIILERIEYCTQDPDV 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 140/320 (43%), Gaps = 57/320 (17%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V AE G +R+ V + M K+ + D+ + ++E
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIG-LDKDKPNRVTKVAVKMLKSDATEKDLS---DLISE 76
Query: 332 LKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWS------- 382
++++ + H N++ L+G C + G L+++ EY GNL E+L+ L +S
Sbjct: 77 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 136
Query: 383 -------SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
V A ARG+EY+ IHRD+ + N+L+ ++ K+ADFGL +
Sbjct: 137 EEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI 193
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ + LP + +M PE + + DV++FGV+L+E+ + +
Sbjct: 194 HHIDYYKKTTNGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 247
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G P+E+L KL+ + P + ++ + + C P
Sbjct: 248 GV---------------------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVP 286
Query: 549 QLRPSMRSIVVALMTLSSTT 568
RP+ + +V L + + T
Sbjct: 287 SQRPTFKQLVEDLDRIVALT 306
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 23/263 (8%)
Query: 267 LSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR 326
L +A + +IG+G +G V+ A G R + + + + + M + R
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGG-----RFVALKRVRVQTGEEGMPLSTIR 60
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCV------EGSLFLVYEYIENGNLSEHLRGSGRDPLP 380
E +A L+ L H N+VRL C E L LV+E+++ +L+ +L +P
Sbjct: 61 E-VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP 118
Query: 381 WSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSA 440
+ + RGL+++H H V +HRD+K NIL+ + K+ADFGL ++ A
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 441 SLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
T +V T Y PE + VD+++ G + E+ K + +G+ S D G +
Sbjct: 176 L--TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK-PLFRGS-SDVDQLGKI 231
Query: 501 ALFEEVLNLPDPIEDLRKLVDPR 523
+V+ LP + R + PR
Sbjct: 232 L---DVIGLPGEEDWPRDVALPR 251
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F + +G+G FG VY A R S+ I ++ K ++K ++ + E
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQ-------SKFILALKVLFKTQLEKAGVE--HQLRRE 62
Query: 332 LKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
+++ +H+ H N++RL GY + + ++L+ EY G + L+ R +
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITE 120
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF 450
A L Y H V IHRDIK N+L+ N K+ADFG + S+ T L GT
Sbjct: 121 LANALSYCHSKRV---IHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDT-LCGTL 174
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
Y+PPE + KVD+++ GV+ YE +
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 204
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 269 KATD-NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
K TD NF M +G+G FG V +E +G L V +L + I+ D++ +
Sbjct: 18 KLTDFNFLMV--LGKGSFGKVMLSERKG------TDELYAVKILKKDVVIQDDDVECT-- 67
Query: 328 FLAELKVLTHVHHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRV 385
+ E +VL + + C + L+ V EY+ G+L H++ GR P + V
Sbjct: 68 -MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA--V 124
Query: 386 QIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR 445
A + A GL ++ + I+RD+K N+++D H K+ADFG+ K +
Sbjct: 125 FYAAEIAIGLFFLQSKGI---IYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKX 180
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
GT Y+ PE Y VD +AFGV+LYE+++ +
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 140/320 (43%), Gaps = 57/320 (17%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V AE G +R+ V + M K+ + D+ + ++E
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIG-LDKDKPNRVTKVAVKMLKSDATEKDLS---DLISE 83
Query: 332 LKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWS------- 382
++++ + H N++ L+G C + G L+++ EY GNL E+L+ L +S
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 143
Query: 383 -------SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
V A ARG+EY+ IHRD+ + N+L+ ++ K+ADFGL +
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ + LP + +M PE + + DV++FGV+L+E+ + +
Sbjct: 201 HHIDYYKKTTNGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 254
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G P+E+L KL+ + P + ++ + + C P
Sbjct: 255 GV---------------------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVP 293
Query: 549 QLRPSMRSIVVALMTLSSTT 568
RP+ + +V L + + T
Sbjct: 294 SQRPTFKQLVEDLDRIVALT 313
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 82
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 140
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S L G
Sbjct: 141 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCG 194
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 55/317 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
N ++ +G G FG VY ++ G N + V L + + Q +FL E
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSG-MPNDPSPLQVAVKTLPEVCS-----EQDELDFLMEA 99
Query: 333 KVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSGRDPLPWSSR-----VQ 386
+++ +H N+VR IG ++ F++ E + G+L LR + P SS +
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILI---DKNFHAKVADFGLTK-------LTE 436
+A D A G +Y+ E+ +IHRDI + N L+ AK+ DFG+ + +
Sbjct: 160 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADS 496
G A LP + +MPPE G + K D ++FGV+L+E+ S +
Sbjct: 217 GGCAMLPVK------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---- 266
Query: 497 KGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRS 556
+EVL + ++ P+ NCP M Q C Q P+ RP +
Sbjct: 267 -------QEVLEF---VTSGGRMDPPK---NCPGPVYRIMTQ----CWQHQPEDRP---N 306
Query: 557 IVVALMTLSSTTEDWDV 573
+ L + T+D DV
Sbjct: 307 FAIILERIEYCTQDPDV 323
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 60/328 (18%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V AE G +R+ V + M K+ + D+ + ++E
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIG-LDKDKPNRVTKVAVKMLKSDATEKDLS---DLISE 83
Query: 332 LKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRG--------------SG 375
++++ + H N++ L+G C + G L+++ EY GNL E+L+ +
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 143
Query: 376 RDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
+ L V A ARG+EY+ IHRD+ + N+L+ ++ K+ADFGL +
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ + LP + +M PE + + DV++FGV+L+E+ + +
Sbjct: 201 HHIDYYKKTTNGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 254
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G P+E+L KL+ + P + ++ + + C P
Sbjct: 255 GV---------------------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVP 293
Query: 549 QLRPSMRSIVVAL---MTLSSTTEDWDV 573
RP+ + +V L + L+S E D+
Sbjct: 294 SQRPTFKQLVEDLDRIVALTSNQEYLDL 321
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 55/317 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
N ++ +G G FG VY ++ G N + V L + + Q +FL E
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSG-MPNDPSPLQVAVKTLPEVCS-----EQDELDFLMEA 85
Query: 333 KVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSGRDPLPWSSR-----VQ 386
+++ +H N+VR IG ++ F++ E + G+L LR + P SS +
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTK-------LTE 436
+A D A G +Y+ E+ +IHRDI + N L+ AK+ DFG+ + +
Sbjct: 146 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADS 496
G A LP + +MPPE G + K D ++FGV+L+E+ S +
Sbjct: 203 GGCAMLPVK------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---- 252
Query: 497 KGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRS 556
+EVL + ++ P+ NCP M Q C Q P+ RP +
Sbjct: 253 -------QEVLEF---VTSGGRMDPPK---NCPGPVYRIMTQ----CWQHQPEDRP---N 292
Query: 557 IVVALMTLSSTTEDWDV 573
+ L + T+D DV
Sbjct: 293 FAIILERIEYCTQDPDV 309
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 140/320 (43%), Gaps = 57/320 (17%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V AE G +R+ V + M K+ + D+ + ++E
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIG-LDKDKPNRVTKVAVKMLKSDATEKDLS---DLISE 68
Query: 332 LKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRG--------------SG 375
++++ + H N++ L+G C + G L+++ EY GNL E+L+ +
Sbjct: 69 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 128
Query: 376 RDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-- 433
+ L V A ARG+EY+ IHRD+ + N+L+ ++ K+ADFGL +
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI 185
Query: 434 -----LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
+ + LP + +M PE + + DV++FGV+L+E+ + +
Sbjct: 186 HHIDYYKKTTNGRLPVK------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 239
Query: 489 GNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
G P+E+L KL+ + P + ++ + + C P
Sbjct: 240 GV---------------------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVP 278
Query: 549 QLRPSMRSIVVALMTLSSTT 568
RP+ + +V L + + T
Sbjct: 279 SQRPTFKQLVEDLDRIVALT 298
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 55/317 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
N ++ +G G FG VY ++ G N + V L + + Q +FL E
Sbjct: 72 NITLIRGLGHGAFGEVYEGQVSG-MPNDPSPLQVAVKTLPEVCS-----EQDELDFLMEA 125
Query: 333 KVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSGRDPLPWSSR-----VQ 386
+++ +H N+VR IG ++ F++ E + G+L LR + P SS +
Sbjct: 126 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 185
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTK-------LTE 436
+A D A G +Y+ E+ +IHRDI + N L+ AK+ DFG+ + +
Sbjct: 186 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRK 242
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADS 496
G A LP + +MPPE G + K D ++FGV+L+E+ S +
Sbjct: 243 GGCAMLPVK------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---- 292
Query: 497 KGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRS 556
+EVL + ++ P+ NCP M Q C Q P+ RP +
Sbjct: 293 -------QEVLEF---VTSGGRMDPPK---NCPGPVYRIMTQ----CWQHQPEDRP---N 332
Query: 557 IVVALMTLSSTTEDWDV 573
+ L + T+D DV
Sbjct: 333 FAIILERIEYCTQDPDV 349
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 55/317 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
N ++ +G G FG VY ++ G N + V L + + Q +FL E
Sbjct: 23 NITLIRGLGHGAFGEVYEGQVSG-MPNDPSPLQVAVKTLPEVCS-----EQDELDFLMEA 76
Query: 333 KVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSGRDPLPWSSR-----VQ 386
+++ +H N+VR IG ++ F++ E + G+L LR + P SS +
Sbjct: 77 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 136
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILI---DKNFHAKVADFGLTK-------LTE 436
+A D A G +Y+ E+ +IHRDI + N L+ AK+ DFG+ + +
Sbjct: 137 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 193
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADS 496
G A LP + +MPPE G + K D ++FGV+L+E+ S +
Sbjct: 194 GGCAMLPVK------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---- 243
Query: 497 KGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRS 556
+EVL + ++ P+ NCP M Q C Q P+ RP +
Sbjct: 244 -------QEVLEF---VTSGGRMDPPK---NCPGPVYRIMTQ----CWQHQPEDRP---N 283
Query: 557 IVVALMTLSSTTEDWDV 573
+ L + T+D DV
Sbjct: 284 FAIILERIEYCTQDPDV 300
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 55/317 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
N ++ +G G FG VY ++ G N + V L + + Q +FL E
Sbjct: 38 NITLIRGLGHGAFGEVYEGQVSG-MPNDPSPLQVAVKTLPEVCS-----EQDELDFLMEA 91
Query: 333 KVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSGRDPLPWSSR-----VQ 386
+++ +H N+VR IG ++ F++ E + G+L LR + P SS +
Sbjct: 92 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 151
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTK-------LTE 436
+A D A G +Y+ E+ +IHRDI + N L+ AK+ DFG+ + +
Sbjct: 152 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 208
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADS 496
G A LP + +MPPE G + K D ++FGV+L+E+ S +
Sbjct: 209 GGCAMLPVK------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---- 258
Query: 497 KGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRS 556
+EVL + ++ P+ NCP M Q C Q P+ RP +
Sbjct: 259 -------QEVLEF---VTSGGRMDPPK---NCPGPVYRIMTQ----CWQHQPEDRP---N 298
Query: 557 IVVALMTLSSTTEDWDV 573
+ L + T+D DV
Sbjct: 299 FAIILERIEYCTQDPDV 315
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 58
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 116
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+A+FG + +S T L G
Sbjct: 117 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIANFGWSVH---APSSRRTTLCG 170
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 17/217 (7%)
Query: 266 ELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS 325
++ ++F + +G+G FG V+ AE + ++ + L + + D++ +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKT------NQFFAIKALKKDVVLMDDDVECT 64
Query: 326 REFLAELKVLTHV-HHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
+ E +VL+ H L + + + +LF V EY+ G+L H++ + L S
Sbjct: 65 ---MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDL--SR 119
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
A + GL+++H + ++RD+K NIL+DK+ H K+ADFG+ K +G A
Sbjct: 120 ATFYAAEIILGLQFLHSKGI---VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-T 175
Query: 444 TRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
GT Y+ PE + VD ++FGV+LYE++
Sbjct: 176 NXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 212
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 55/317 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
N ++ +G G FG VY ++ G N + V L + + Q +FL E
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSG-MPNDPSPLQVAVKTLPEVCS-----EQDELDFLMEA 84
Query: 333 KVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSGRDPLPWSSR-----VQ 386
+++ +H N+VR IG ++ F++ E + G+L LR + P SS +
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTK-------LTE 436
+A D A G +Y+ E+ +IHRDI + N L+ AK+ DFG+ + +
Sbjct: 145 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 201
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADS 496
G A LP + +MPPE G + K D ++FGV+L+E+ S +
Sbjct: 202 GGCAMLPVK------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---- 251
Query: 497 KGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRS 556
+EVL + ++ P+ NCP M Q C Q P+ RP +
Sbjct: 252 -------QEVLEF---VTSGGRMDPPK---NCPGPVYRIMTQ----CWQHQPEDRP---N 291
Query: 557 IVVALMTLSSTTEDWDV 573
+ L + T+D DV
Sbjct: 292 FAIILERIEYCTQDPDV 308
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 55/317 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
N ++ +G G FG VY ++ G N + V L + + Q +FL E
Sbjct: 49 NITLIRGLGHGAFGEVYEGQVSG-MPNDPSPLQVAVKTLPEVCS-----EQDELDFLMEA 102
Query: 333 KVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSGRDPLPWSSR-----VQ 386
+++ +H N+VR IG ++ F++ E + G+L LR + P SS +
Sbjct: 103 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 162
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILI---DKNFHAKVADFGLTK-------LTE 436
+A D A G +Y+ E+ +IHRDI + N L+ AK+ DFG+ + +
Sbjct: 163 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRK 219
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADS 496
G A LP + +MPPE G + K D ++FGV+L+E+ S +
Sbjct: 220 GGCAMLPVK------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---- 269
Query: 497 KGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRS 556
+EVL + ++ P+ NCP M Q C Q P+ RP +
Sbjct: 270 -------QEVLEF---VTSGGRMDPPK---NCPGPVYRIMTQ----CWQHQPEDRP---N 309
Query: 557 IVVALMTLSSTTEDWDV 573
+ L + T+D DV
Sbjct: 310 FAIILERIEYCTQDPDV 326
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 58
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 116
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S L G
Sbjct: 117 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCG 170
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 27/240 (11%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
DNF +G+G FG V A ++ E G+ Y V +L + ++ D++ + + E
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVK-ETGDLY-----AVKVLKKDVILQDDDVECT---MTE 73
Query: 332 LKVLTHVHHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI-A 388
++L+ + + + C + LF V E++ G+L H++ S R +R + A
Sbjct: 74 KRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD---EARARFYA 130
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ L ++H+ + I+RD+K N+L+D H K+ADFG+ K + T G
Sbjct: 131 AEIISALMFLHDKGI---IYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT-FCG 186
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLN 508
T Y+ PE Q P VD +A GV+LYE++ N LFE +LN
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD--------LFEAILN 238
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 57
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 115
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + S+ T L G
Sbjct: 116 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDT-LCG 169
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 23/263 (8%)
Query: 267 LSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR 326
L +A + +IG+G +G V+ A G R + + + + + M + R
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGG-----RFVALKRVRVQTGEEGMPLSTIR 60
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCV------EGSLFLVYEYIENGNLSEHLRGSGRDPLP 380
E +A L+ L H N+VRL C E L LV+E+++ +L+ +L +P
Sbjct: 61 E-VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP 118
Query: 381 WSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSA 440
+ + RGL+++H H V +HRD+K NIL+ + K+ADFGL ++ A
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 441 SLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
T +V T Y PE + VD+++ G + E+ K + +G+ S D G +
Sbjct: 176 L--TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK-PLFRGS-SDVDQLGKI 231
Query: 501 ALFEEVLNLPDPIEDLRKLVDPR 523
+V+ LP + R + PR
Sbjct: 232 L---DVIGLPGEEDWPRDVALPR 251
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 55/317 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
N ++ +G G FG VY ++ G N + V L + + Q +FL E
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSG-MPNDPSPLQVAVKTLPEVCS-----EQDELDFLMEA 84
Query: 333 KVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSGRDPLPWSSR-----VQ 386
+++ +H N+VR IG ++ F++ E + G+L LR + P SS +
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTK-------LTE 436
+A D A G +Y+ E+ +IHRDI + N L+ AK+ DFG+ + +
Sbjct: 145 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 201
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADS 496
G A LP + +MPPE G + K D ++FGV+L+E+ S +
Sbjct: 202 GGCAMLPVK------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---- 251
Query: 497 KGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRS 556
+EVL + ++ P+ NCP M Q C Q P+ RP +
Sbjct: 252 -------QEVLEF---VTSGGRMDPPK---NCPGPVYRIMTQ----CWQHQPEDRP---N 291
Query: 557 IVVALMTLSSTTEDWDV 573
+ L + T+D DV
Sbjct: 292 FAIILERIEYCTQDPDV 308
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 55/317 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
N ++ +G G FG VY ++ G N + V L + + Q +FL E
Sbjct: 48 NITLIRGLGHGAFGEVYEGQVSG-MPNDPSPLQVAVKTLPEVCS-----EQDELDFLMEA 101
Query: 333 KVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSGRDPLPWSSR-----VQ 386
+++ +H N+VR IG ++ F++ E + G+L LR + P SS +
Sbjct: 102 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 161
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTK-------LTE 436
+A D A G +Y+ E+ +IHRDI + N L+ AK+ DFG+ + +
Sbjct: 162 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 218
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADS 496
G A LP + +MPPE G + K D ++FGV+L+E+ S +
Sbjct: 219 GGCAMLPVK------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---- 268
Query: 497 KGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRS 556
+EVL + ++ P+ NCP M Q C Q P+ RP +
Sbjct: 269 -------QEVLEF---VTSGGRMDPPK---NCPGPVYRIMTQ----CWQHQPEDRP---N 308
Query: 557 IVVALMTLSSTTEDWDV 573
+ L + T+D DV
Sbjct: 309 FAIILERIEYCTQDPDV 325
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 23/263 (8%)
Query: 267 LSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR 326
L +A + +IG+G +G V+ A G R + + + + + M + R
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGG-----RFVALKRVRVQTGEEGMPLSTIR 60
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCV------EGSLFLVYEYIENGNLSEHLRGSGRDPLP 380
E +A L+ L H N+VRL C E L LV+E+++ +L+ +L +P
Sbjct: 61 E-VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP 118
Query: 381 WSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSA 440
+ + RGL+++H H V +HRD+K NIL+ + K+ADFGL ++ A
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 441 SLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
T +V T Y PE + VD+++ G + E+ K + +G+ S D G +
Sbjct: 176 L--TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK-PLFRGS-SDVDQLGKI 231
Query: 501 ALFEEVLNLPDPIEDLRKLVDPR 523
+V+ LP + R + PR
Sbjct: 232 L---DVIGLPGEEDWPRDVALPR 251
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 59
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 117
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S L G
Sbjct: 118 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCG 171
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKN-------SKFILALKVLFKAQLEKAGVE--HQLR 56
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 114
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S L G
Sbjct: 115 TELANALSYCHSKKV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCG 168
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 55/317 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
N ++ +G G FG VY ++ G N + V L + + Q +FL E
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSG-MPNDPSPLQVAVKTLPEVCS-----EQDELDFLMEA 85
Query: 333 KVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSGRDPLPWSSR-----VQ 386
+++ +H N+VR IG ++ F++ E + G+L LR + P SS +
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTK-------LTE 436
+A D A G +Y+ E+ +IHRDI + N L+ AK+ DFG+ + +
Sbjct: 146 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRK 202
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADS 496
G A LP + +MPPE G + K D ++FGV+L+E+ S +
Sbjct: 203 GGCAMLPVK------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---- 252
Query: 497 KGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRS 556
+EVL + ++ P+ NCP M Q C Q P+ RP +
Sbjct: 253 -------QEVLEF---VTSGGRMDPPK---NCPGPVYRIMTQ----CWQHQPEDRP---N 292
Query: 557 IVVALMTLSSTTEDWDV 573
+ L + T+D DV
Sbjct: 293 FAIILERIEYCTQDPDV 309
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 59
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 117
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+A+FG + +S T L G
Sbjct: 118 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCG 171
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + + I ++ KA ++K ++ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQR-------KFILALKVLFKAQLEKAGVE--HQLR 53
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 54 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 111
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S T L G
Sbjct: 112 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCG 165
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 166 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 56
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 114
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S L G
Sbjct: 115 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCG 168
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG+V R + I V + + K +K D + E + E +++ +
Sbjct: 17 ELGCGNFGSVRQGVYRMR------KKQIDVAIKVLKQGTEKAD---TEEMMREAQIMHQL 67
Query: 339 HHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYI 398
+ +VRLIG C +L LV E G L + L G R+ +P S+ ++ + G++Y+
Sbjct: 68 DNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYL 126
Query: 399 HEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF--GYMPPE 456
E ++HRD+ + N+L+ +AK++DFGL+K + R G + + PE
Sbjct: 127 EEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 183
Query: 457 YAQYGDVSPKVDVYAFGVVLYELIS 481
+ S + DV+++GV ++E +S
Sbjct: 184 CINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 59
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 117
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S L G
Sbjct: 118 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCG 171
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 56
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 114
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S L G
Sbjct: 115 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCG 168
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 55/317 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
N ++ +G G FG VY ++ G N + V L + + Q +FL E
Sbjct: 58 NITLIRGLGHGAFGEVYEGQVSG-MPNDPSPLQVAVKTLPEVCS-----EQDELDFLMEA 111
Query: 333 KVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSGRDPLPWSSR-----VQ 386
+++ +H N+VR IG ++ F++ E + G+L LR + P SS +
Sbjct: 112 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 171
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTK-------LTE 436
+A D A G +Y+ E+ +IHRDI + N L+ AK+ DFG+ + +
Sbjct: 172 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 228
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADS 496
G A LP + +MPPE G + K D ++FGV+L+E+ S +
Sbjct: 229 GGCAMLPVK------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---- 278
Query: 497 KGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRS 556
+EVL + ++ P+ NCP M Q C Q P+ RP +
Sbjct: 279 -------QEVLEF---VTSGGRMDPPK---NCPGPVYRIMTQ----CWQHQPEDRP---N 318
Query: 557 IVVALMTLSSTTEDWDV 573
+ L + T+D DV
Sbjct: 319 FAIILERIEYCTQDPDV 335
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 55/317 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
N ++ +G G FG VY ++ G N + V L + + Q +FL E
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSG-MPNDPSPLQVAVKTLPEVYS-----EQDELDFLMEA 99
Query: 333 KVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSGRDPLPWSSR-----VQ 386
+++ +H N+VR IG ++ F++ E + G+L LR + P SS +
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTK-------LTE 436
+A D A G +Y+ E+ +IHRDI + N L+ AK+ DFG+ + +
Sbjct: 160 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADS 496
G A LP + +MPPE G + K D ++FGV+L+E+ S +
Sbjct: 217 GGCAMLPVK------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---- 266
Query: 497 KGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRS 556
+EVL + ++ P+ NCP M Q C Q P+ RP +
Sbjct: 267 -------QEVLEF---VTSGGRMDPPK---NCPGPVYRIMTQ----CWQHQPEDRP---N 306
Query: 557 IVVALMTLSSTTEDWDV 573
+ L + T+D DV
Sbjct: 307 FAIILERIEYCTQDPDV 323
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A ++F + +G+G FG VY A + S+ I ++ KA ++K ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQ-------SKFILALKVLFKAQLEKAGVE--HQLR 59
Query: 330 AELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+++ +H+ H N++RL GY + + ++L+ EY G + L+ +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYI 117
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A L Y H V IHRDIK N+L+ K+ADFG + +S L G
Sbjct: 118 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCG 171
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T Y+PPE + KVD+++ GV+ YE + K
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 125/294 (42%), Gaps = 47/294 (15%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG G FG VY L+ G + + V + KA + + +FL E ++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGK----KEVPVAIKTLKAGYTE---KQRVDFLGEAGIMGQFS 104
Query: 340 HLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYI 398
H N++RL G + + ++ EY+ENG L + LR + V + A G++Y+
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKYL 163
Query: 399 HEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTE--------VGSASLPTRLVGTF 450
Y+HRD+ + NIL++ N KV+DFGL+++ E +P R
Sbjct: 164 ANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR----- 215
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLP 510
+ PE Y + DV++FG+V++E+++ E + E+ N
Sbjct: 216 -WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP----------------YWELSN-- 256
Query: 511 DPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
++ K ++ P+D + QL C Q+ RP IV L L
Sbjct: 257 ---HEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 132/307 (42%), Gaps = 38/307 (12%)
Query: 263 SYEELSKATD--NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKM 320
+ E +K D N S+ +G G FG V L+ L +++ ++ +
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK-------LPSKKEISVAIKTLKVGYT 86
Query: 321 DMQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPL 379
+ Q R+FL E ++ H N++RL G + + +V E +ENG+L LR
Sbjct: 87 EKQ-RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-F 144
Query: 380 PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGS 439
V + A G++Y+ + +HRD+ + NILI+ N KV+DFGL+++ E
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 201
Query: 440 ASLPTRLVGT--FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSK 497
+ T G + PE Y + DV+++G+VL+E++S E
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE------------- 248
Query: 498 GLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSI 557
+ E+ N +D+ K VD P+D + QL C Q+ RP I
Sbjct: 249 ---RPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQI 300
Query: 558 VVALMTL 564
V L L
Sbjct: 301 VSILDKL 307
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 70/303 (23%)
Query: 276 MSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVL 335
+ IG+G FG V+ + RGE + A+K + R + E ++
Sbjct: 33 LQESIGKGRFGEVWRGKWRGE-----------------EVAVKIFSSREERSWFREAEIY 75
Query: 336 THV--HHLNLVRLIGY-----CVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
V H N++ I L+LV +Y E+G+L ++L R + +++A
Sbjct: 76 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLA 132
Query: 389 LDSARGLEYIHEHTV-----PVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL- 442
L +A GL ++H V P HRD+KS NIL+ KN +AD GL + + ++
Sbjct: 133 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 192
Query: 443 --PTRLVGTFGYMPPEY------AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSA 494
P VGT YM PE ++ + + D+YA G+V +E+ A+ + G
Sbjct: 193 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGG----- 245
Query: 495 DSKGLVALFEEVLNLP-------DP-IEDLRKLV-DPRLGDNCP-----LDSVLKMAQLA 540
E LP DP +E++RK+V + +L N P +++ MA++
Sbjct: 246 --------IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIM 297
Query: 541 KVC 543
+ C
Sbjct: 298 REC 300
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 70/303 (23%)
Query: 276 MSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVL 335
+ IG+G FG V+ + RGE + A+K + R + E ++
Sbjct: 46 LQESIGKGRFGEVWRGKWRGE-----------------EVAVKIFSSREERSWFREAEIY 88
Query: 336 THV--HHLNLVRLIGY-----CVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
V H N++ I L+LV +Y E+G+L ++L R + +++A
Sbjct: 89 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLA 145
Query: 389 LDSARGLEYIHEHTV-----PVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL- 442
L +A GL ++H V P HRD+KS NIL+ KN +AD GL + + ++
Sbjct: 146 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 205
Query: 443 --PTRLVGTFGYMPPEY------AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSA 494
P VGT YM PE ++ + + D+YA G+V +E+ A+ + G
Sbjct: 206 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGG----- 258
Query: 495 DSKGLVALFEEVLNLP-------DP-IEDLRKLV-DPRLGDNCP-----LDSVLKMAQLA 540
E LP DP +E++RK+V + +L N P +++ MA++
Sbjct: 259 --------IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIM 310
Query: 541 KVC 543
+ C
Sbjct: 311 REC 313
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D+F + +G+G FG VY A + S I ++ K+ I+K ++ + E
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKK-------SHFIVALKVLFKSQIEKEGVE--HQLRRE 73
Query: 332 LKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
+++ H+HH N++RL Y + ++L+ EY G L + L+ S I +
Sbjct: 74 IEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC--TFDEQRTATIMEE 131
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR-LVGT 449
A L Y H V IHRDIK N+L+ K+ADFG + V + SL + + GT
Sbjct: 132 LADALMYCHGKKV---IHRDIKPENLLLGLKGELKIADFGWS----VHAPSLRRKTMCGT 184
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
Y+PPE + + KVD++ GV+ YEL+
Sbjct: 185 LDYLPPEMIEGRMHNEKVDLWCIGVLCYELL 215
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 70/303 (23%)
Query: 276 MSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVL 335
+ IG+G FG V+ + RGE + A+K + R + E ++
Sbjct: 8 LQESIGKGRFGEVWRGKWRGE-----------------EVAVKIFSSREERSWFREAEIY 50
Query: 336 THV--HHLNLVRLIGY-----CVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
V H N++ I L+LV +Y E+G+L ++L R + +++A
Sbjct: 51 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLA 107
Query: 389 LDSARGLEYIHEHTV-----PVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL- 442
L +A GL ++H V P HRD+KS NIL+ KN +AD GL + + ++
Sbjct: 108 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 167
Query: 443 --PTRLVGTFGYMPPEY------AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSA 494
P VGT YM PE ++ + + D+YA G+V +E+ A+ + G
Sbjct: 168 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGG----- 220
Query: 495 DSKGLVALFEEVLNLP-------DP-IEDLRKLV-DPRLGDNCP-----LDSVLKMAQLA 540
E LP DP +E++RK+V + +L N P +++ MA++
Sbjct: 221 --------IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIM 272
Query: 541 KVC 543
+ C
Sbjct: 273 REC 275
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 70/303 (23%)
Query: 276 MSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVL 335
+ IG+G FG V+ + RGE + A+K + R + E ++
Sbjct: 13 LQESIGKGRFGEVWRGKWRGE-----------------EVAVKIFSSREERSWFREAEIY 55
Query: 336 THV--HHLNLVRLIGY-----CVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
V H N++ I L+LV +Y E+G+L ++L R + +++A
Sbjct: 56 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLA 112
Query: 389 LDSARGLEYIHEHTV-----PVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL- 442
L +A GL ++H V P HRD+KS NIL+ KN +AD GL + + ++
Sbjct: 113 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 172
Query: 443 --PTRLVGTFGYMPPEY------AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSA 494
P VGT YM PE ++ + + D+YA G+V +E+ A+ + G
Sbjct: 173 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGG----- 225
Query: 495 DSKGLVALFEEVLNLP-------DP-IEDLRKLV-DPRLGDNCP-----LDSVLKMAQLA 540
E LP DP +E++RK+V + +L N P +++ MA++
Sbjct: 226 --------IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIM 277
Query: 541 KVC 543
+ C
Sbjct: 278 REC 280
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 70/303 (23%)
Query: 276 MSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVL 335
+ IG+G FG V+ + RGE + A+K + R + E ++
Sbjct: 7 LQESIGKGRFGEVWRGKWRGE-----------------EVAVKIFSSREERSWFREAEIY 49
Query: 336 THV--HHLNLVRLIGY-----CVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
V H N++ I L+LV +Y E+G+L ++L R + +++A
Sbjct: 50 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLA 106
Query: 389 LDSARGLEYIHEHTV-----PVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL- 442
L +A GL ++H V P HRD+KS NIL+ KN +AD GL + + ++
Sbjct: 107 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 166
Query: 443 --PTRLVGTFGYMPPEY------AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSA 494
P VGT YM PE ++ + + D+YA G+V +E+ A+ + G
Sbjct: 167 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGG----- 219
Query: 495 DSKGLVALFEEVLNLP-------DP-IEDLRKLV-DPRLGDNCP-----LDSVLKMAQLA 540
E LP DP +E++RK+V + +L N P +++ MA++
Sbjct: 220 --------IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIM 271
Query: 541 KVC 543
+ C
Sbjct: 272 REC 274
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 70/303 (23%)
Query: 276 MSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVL 335
+ IG+G FG V+ + RGE + A+K + R + E ++
Sbjct: 10 LQESIGKGRFGEVWRGKWRGE-----------------EVAVKIFSSREERSWFREAEIY 52
Query: 336 THV--HHLNLVRLIGY-----CVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
V H N++ I L+LV +Y E+G+L ++L R + +++A
Sbjct: 53 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLA 109
Query: 389 LDSARGLEYIHEHTV-----PVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL- 442
L +A GL ++H V P HRD+KS NIL+ KN +AD GL + + ++
Sbjct: 110 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 169
Query: 443 --PTRLVGTFGYMPPEY------AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSA 494
P VGT YM PE ++ + + D+YA G+V +E+ A+ + G
Sbjct: 170 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGG----- 222
Query: 495 DSKGLVALFEEVLNLP-------DP-IEDLRKLV-DPRLGDNCP-----LDSVLKMAQLA 540
E LP DP +E++RK+V + +L N P +++ MA++
Sbjct: 223 --------IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIM 274
Query: 541 KVC 543
+ C
Sbjct: 275 REC 277
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 45/300 (15%)
Query: 278 HKIGQGGFGAV---YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---REFLAE 331
++G+G FG+V Y L+ G + A+KK+ R+F E
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTG--------------EVVAVKKLQHSTEEHLRDFERE 61
Query: 332 LKVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
+++L + H N+V+ G C +L L+ EY+ G+L ++L+ ++ + +Q
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYT 120
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+G+EY+ YIHRD+ + NIL++ K+ DFGLTK+ + G
Sbjct: 121 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 449 T---FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
F Y P + S DV++FGVVLYEL + I K A+ ++ ++
Sbjct: 178 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQ 233
Query: 506 ----VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
V +L + +++ +L P D CP + + M + C RPS R + + +
Sbjct: 234 GQMIVFHLIELLKNNGRLPRP---DGCPDEIYMIMTE----CWNNNVNQRPSFRDLALRV 286
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 45/300 (15%)
Query: 278 HKIGQGGFGAV---YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---REFLAE 331
++G+G FG+V Y L+ G + A+KK+ R+F E
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTG--------------EVVAVKKLQHSTEEHLRDFERE 92
Query: 332 LKVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
+++L + H N+V+ G C +L L+ EY+ G+L ++L+ ++ + +Q
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYT 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+G+EY+ YIHRD+ + NIL++ K+ DFGLTK+ + G
Sbjct: 152 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 208
Query: 449 T---FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
F Y P + S DV++FGVVLYEL + I K A+ ++ ++
Sbjct: 209 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQ 264
Query: 506 ----VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
V +L + +++ +L P D CP + + M + C RPS R + + +
Sbjct: 265 GQMIVFHLIELLKNNGRLPRP---DGCPDEIYMIMTE----CWNNNVNQRPSFRDLALRV 317
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 45/300 (15%)
Query: 278 HKIGQGGFGAV---YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---REFLAE 331
++G+G FG+V Y L+ G + A+KK+ R+F E
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTG--------------EVVAVKKLQHSTEEHLRDFERE 68
Query: 332 LKVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
+++L + H N+V+ G C +L L+ EY+ G+L ++L+ ++ + +Q
Sbjct: 69 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYT 127
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+G+EY+ YIHRD+ + NIL++ K+ DFGLTK+ + G
Sbjct: 128 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 184
Query: 449 T---FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
F Y P + S DV++FGVVLYEL + I K A+ ++ ++
Sbjct: 185 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQ 240
Query: 506 ----VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
V +L + +++ +L P D CP + + M + C RPS R + + +
Sbjct: 241 GQMIVFHLIELLKNNGRLPRP---DGCPDEIYMIMTE----CWNNNVNQRPSFRDLALRV 293
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 63/257 (24%)
Query: 255 TVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQK 314
TVDK ++E+ IG GGFG V+ A+ R + G +Y+ R + N
Sbjct: 5 TVDKRFGMDFKEIEL----------IGSGGFGQVFKAKHRID-GKTYVIRRVKYN----- 48
Query: 315 AAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEG--------------------- 353
+ +A RE +K L + H+N+V G C +G
Sbjct: 49 ------NEKAERE----VKALAKLDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPEN 97
Query: 354 ----------SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTV 403
LF+ E+ + G L + + + L +++ +G++YIH +
Sbjct: 98 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKL 157
Query: 404 PVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDV 463
IHRD+K +NI + K+ DFGL +T + + TR GT YM PE D
Sbjct: 158 ---IHRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGKRTRSKGTLRYMSPEQISSQDY 212
Query: 464 SPKVDVYAFGVVLYELI 480
+VD+YA G++L EL+
Sbjct: 213 GKEVDLYALGLILAELL 229
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 45/300 (15%)
Query: 278 HKIGQGGFGAV---YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---REFLAE 331
++G+G FG+V Y L+ G + A+KK+ R+F E
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTG--------------EVVAVKKLQHSTEEHLRDFERE 60
Query: 332 LKVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
+++L + H N+V+ G C +L L+ EY+ G+L ++L+ ++ + +Q
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYT 119
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+G+EY+ YIHRD+ + NIL++ K+ DFGLTK+ + G
Sbjct: 120 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 176
Query: 449 T---FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
F Y P + S DV++FGVVLYEL + I K A+ ++ ++
Sbjct: 177 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQ 232
Query: 506 ----VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
V +L + +++ +L P D CP + + M + C RPS R + + +
Sbjct: 233 GQMIVFHLIELLKNNGRLPRP---DGCPDEIYMIMTE----CWNNNVNQRPSFRDLALRV 285
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 45/300 (15%)
Query: 278 HKIGQGGFGAV---YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---REFLAE 331
++G+G FG+V Y L+ G + A+KK+ R+F E
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTG--------------EVVAVKKLQHSTEEHLRDFERE 66
Query: 332 LKVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
+++L + H N+V+ G C +L L+ EY+ G+L ++L+ ++ + +Q
Sbjct: 67 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYT 125
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+G+EY+ YIHRD+ + NIL++ K+ DFGLTK+ + G
Sbjct: 126 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 182
Query: 449 T---FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
F Y P + S DV++FGVVLYEL + I K A+ ++ ++
Sbjct: 183 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQ 238
Query: 506 ----VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
V +L + +++ +L P D CP + + M + C RPS R + + +
Sbjct: 239 GQMIVFHLIELLKNNGRLPRP---DGCPDEIYMIMTE----CWNNNVNQRPSFRDLALRV 291
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 45/300 (15%)
Query: 278 HKIGQGGFGAV---YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---REFLAE 331
++G+G FG+V Y L+ G + A+KK+ R+F E
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTG--------------EVVAVKKLQHSTEEHLRDFERE 67
Query: 332 LKVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
+++L + H N+V+ G C +L L+ EY+ G+L ++L+ ++ + +Q
Sbjct: 68 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYT 126
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+G+EY+ YIHRD+ + NIL++ K+ DFGLTK+ + G
Sbjct: 127 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 183
Query: 449 T---FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
F Y P + S DV++FGVVLYEL + I K A+ ++ ++
Sbjct: 184 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQ 239
Query: 506 ----VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
V +L + +++ +L P D CP + + M + C RPS R + + +
Sbjct: 240 GQMIVFHLIELLKNNGRLPRP---DGCPDEIYMIMTE----CWNNNVNQRPSFRDLALRV 292
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 45/300 (15%)
Query: 278 HKIGQGGFGAV---YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---REFLAE 331
++G+G FG+V Y L+ G + A+KK+ R+F E
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTG--------------EVVAVKKLQHSTEEHLRDFERE 61
Query: 332 LKVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
+++L + H N+V+ G C +L L+ EY+ G+L ++L+ ++ + +Q
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYT 120
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+G+EY+ YIHRD+ + NIL++ K+ DFGLTK+ + G
Sbjct: 121 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 449 T---FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
F Y P + S DV++FGVVLYEL + I K A+ ++ ++
Sbjct: 178 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQ 233
Query: 506 ----VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
V +L + +++ +L P D CP + + M + C RPS R + + +
Sbjct: 234 GQMIVFHLIELLKNNGRLPRP---DGCPDEIYMIMTE----CWNNNVNQRPSFRDLALRV 286
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 45/300 (15%)
Query: 278 HKIGQGGFGAV---YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---REFLAE 331
++G+G FG+V Y L+ G + A+KK+ R+F E
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTG--------------EVVAVKKLQHSTEEHLRDFERE 79
Query: 332 LKVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
+++L + H N+V+ G C +L L+ EY+ G+L ++L+ ++ + +Q
Sbjct: 80 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYT 138
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+G+EY+ YIHRD+ + NIL++ K+ DFGLTK+ + G
Sbjct: 139 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 195
Query: 449 T---FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
F Y P + S DV++FGVVLYEL + I K A+ ++ ++
Sbjct: 196 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQ 251
Query: 506 ----VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
V +L + +++ +L P D CP + + M + C RPS R + + +
Sbjct: 252 GQMIVFHLIELLKNNGRLPRP---DGCPDEIYMIMTE----CWNNNVNQRPSFRDLALRV 304
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 45/300 (15%)
Query: 278 HKIGQGGFGAV---YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---REFLAE 331
++G+G FG+V Y L+ G + A+KK+ R+F E
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTG--------------EVVAVKKLQHSTEEHLRDFERE 61
Query: 332 LKVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
+++L + H N+V+ G C +L L+ EY+ G+L ++L+ ++ + +Q
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYT 120
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+G+EY+ YIHRD+ + NIL++ K+ DFGLTK+ + G
Sbjct: 121 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPG 177
Query: 449 T---FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
F Y P + S DV++FGVVLYEL + I K A+ ++ ++
Sbjct: 178 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQ 233
Query: 506 ----VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
V +L + +++ +L P D CP + + M + C RPS R + + +
Sbjct: 234 GQMIVFHLIELLKNNGRLPRP---DGCPDEIYMIMTE----CWNNNVNQRPSFRDLALRV 286
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 133/300 (44%), Gaps = 45/300 (15%)
Query: 278 HKIGQGGFGAV---YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---REFLAE 331
++G+G FG+V Y L+ G + A+KK+ R+F E
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTG--------------EVVAVKKLQHSTEEHLRDFERE 64
Query: 332 LKVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
+++L + H N+V+ G C +L L+ EY+ G+L ++L+ + + +Q
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHA-ERIDHIKLLQYT 123
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+G+EY+ YIHRD+ + NIL++ K+ DFGLTK+ + G
Sbjct: 124 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 449 T---FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
F Y P + S DV++FGVVLYEL + I K A+ ++ ++
Sbjct: 181 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQ 236
Query: 506 ----VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
V +L + +++ +L P D CP + + M + C RPS R + + +
Sbjct: 237 GQMIVFHLIELLKNNGRLPRP---DGCPDEIYMIMTE----CWNNNVNQRPSFRDLALRV 289
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 137/316 (43%), Gaps = 25/316 (7%)
Query: 170 YPLRPGDSLQSIARNVGLSESLLQNYNPGVNFTRGSGLVFIPGRDANGVFPALESSSTGG 229
Y + P D ++ RN L+++ L + P + + +P + LE
Sbjct: 90 YEVTPDDKRKACGRN--LTQNFLSHTGPDL-------IPEVPRQLVTNCTQRLEQGPCKD 140
Query: 230 LVFPAYKTVESTGPAAGTPTSLNAITVDKSVEFSYEELSKATDN-FSMSHKIGQGGFGAV 288
L + A L++I ++ +++ + E T N F +G+GGFG V
Sbjct: 141 LFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEV 200
Query: 289 YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLI- 347
++R G Y C L ++ +K + A L E ++L V+ +V L
Sbjct: 201 CACQVRAT-GKMY----ACKKLEKKRIKKRKGEAMA----LNEKQILEKVNSRFVVSLAY 251
Query: 348 GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYI 407
Y + +L LV + G+L H+ G+ P + V A + GLE +H + +
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI---V 308
Query: 408 HRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKV 467
+RD+K NIL+D + H +++D GL V VGT GYM PE + +
Sbjct: 309 YRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSP 366
Query: 468 DVYAFGVVLYELISAK 483
D +A G +LYE+I+ +
Sbjct: 367 DWWALGCLLYEMIAGQ 382
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 16/224 (7%)
Query: 261 EFSYEELSKATDNFSMSH-KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKK 319
E ++L DN ++ ++G G FG+V R + I V + + K +K
Sbjct: 324 ELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMR------KKQIDVAIKVLKQGTEK 377
Query: 320 MDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPL 379
D + E + E +++ + + +VRLIG C +L LV E G L + L G R+ +
Sbjct: 378 AD---TEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGK-REEI 433
Query: 380 PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGS 439
P S+ ++ + G++Y+ E ++HR++ + N+L+ +AK++DFGL+K
Sbjct: 434 PVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490
Query: 440 ASLPTRLVGTF--GYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+ R G + + PE + S + DV+++GV ++E +S
Sbjct: 491 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 45/300 (15%)
Query: 278 HKIGQGGFGAV---YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---REFLAE 331
++G+G FG+V Y L+ G + A+KK+ R+F E
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTG--------------EVVAVKKLQHSTEEHLRDFERE 64
Query: 332 LKVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
+++L + H N+V+ G C +L L+ EY+ G+L ++L+ ++ + +Q
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYT 123
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+G+EY+ YIHRD+ + NIL++ K+ DFGLTK+ + G
Sbjct: 124 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 449 T---FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
F Y P + S DV++FGVVLYEL + I K A+ ++ ++
Sbjct: 181 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQ 236
Query: 506 ----VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
V +L + +++ +L P D CP + + M + C RPS R + + +
Sbjct: 237 GQMIVFHLIELLKNNGRLPRP---DGCPDEIYMIMTE----CWNNNVNQRPSFRDLALRV 289
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 45/300 (15%)
Query: 278 HKIGQGGFGAV---YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---REFLAE 331
++G+G FG+V Y L+ G + A+KK+ R+F E
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTG--------------EVVAVKKLQHSTEEHLRDFERE 59
Query: 332 LKVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
+++L + H N+V+ G C +L L+ EY+ G+L ++L+ ++ + +Q
Sbjct: 60 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYT 118
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+G+EY+ YIHRD+ + NIL++ K+ DFGLTK+ + G
Sbjct: 119 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 175
Query: 449 T---FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
F Y P + S DV++FGVVLYEL + I K A+ ++ ++
Sbjct: 176 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQ 231
Query: 506 ----VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
V +L + +++ +L P D CP + + M + C RPS R + + +
Sbjct: 232 GQMIVFHLIELLKNNGRLPRP---DGCPDEIYMIMTE----CWNNNVNQRPSFRDLALRV 284
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 45/299 (15%)
Query: 279 KIGQGGFGAV---YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---REFLAEL 332
++G+G FG+V Y L+ G + A+KK+ R+F E+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTG--------------EVVAVKKLQHSTEEHLRDFEREI 65
Query: 333 KVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
++L + H N+V+ G C +L L+ E++ G+L E+L+ ++ + +Q
Sbjct: 66 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQ-KHKERIDHIKLLQYTS 124
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
+G+EY+ YIHRD+ + NIL++ K+ DFGLTK+ + G
Sbjct: 125 QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 450 ---FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE- 505
F Y P + S DV++FGVVLYEL + I K A+ ++ ++
Sbjct: 182 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQG 237
Query: 506 ---VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
V +L + +++ +L P D CP + + M + C RPS R + + +
Sbjct: 238 QMIVFHLIELLKNNGRLPRP---DGCPDEIYMIMTE----CWNNNVNQRPSFRDLALRV 289
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 45/300 (15%)
Query: 278 HKIGQGGFGAV---YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---REFLAE 331
++G+G FG+V Y L+ G + A+KK+ R+F E
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTG--------------EVVAVKKLQHSTEEHLRDFERE 65
Query: 332 LKVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
+++L + H N+V+ G C +L L+ EY+ G+L ++L+ ++ + +Q
Sbjct: 66 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYT 124
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+G+EY+ YIHRD+ + NIL++ K+ DFGLTK+ + G
Sbjct: 125 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 181
Query: 449 T---FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
F Y P + S DV++FGVVLYEL + I K A+ ++ ++
Sbjct: 182 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQ 237
Query: 506 ----VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
V +L + +++ +L P D CP + + M + C RPS R + + +
Sbjct: 238 GQMIVFHLIELLKNNGRLPRP---DGCPDEIYMIMTE----CWNNNVNQRPSFRDLALRV 290
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 45/300 (15%)
Query: 278 HKIGQGGFGAV---YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---REFLAE 331
++G+G FG+V Y L+ G + A+KK+ R+F E
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTG--------------EVVAVKKLQHSTEEHLRDFERE 79
Query: 332 LKVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
+++L + H N+V+ G C +L L+ EY+ G+L ++L+ ++ + +Q
Sbjct: 80 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYT 138
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+G+EY+ YIHRD+ + NIL++ K+ DFGLTK+ + G
Sbjct: 139 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 195
Query: 449 T---FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
F Y P + S DV++FGVVLYEL + I K A+ ++ ++
Sbjct: 196 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQ 251
Query: 506 ----VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
V +L + +++ +L P D CP + + M + C RPS R + + +
Sbjct: 252 GQMIVFHLIELLKNNGRLPRP---DGCPDEIYMIMTE----CWNNNVNQRPSFRDLALRV 304
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 112/235 (47%), Gaps = 16/235 (6%)
Query: 251 LNAITVDKSVEFSYEELSKATDN-FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVN 309
L++I ++ +++ + E T N F +G+GGFG V ++R G Y C
Sbjct: 162 LDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRA-TGKMY----ACKK 216
Query: 310 LLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLS 368
L ++ +K + A L E ++L V+ +V L Y + +L LV + G+L
Sbjct: 217 LEKKRIKKRKGEAMA----LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLK 272
Query: 369 EHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVAD 428
H+ G+ P + V A + GLE +H + ++RD+K NIL+D + H +++D
Sbjct: 273 FHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI---VYRDLKPENILLDDHGHIRISD 329
Query: 429 FGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
GL V VGT GYM PE + + D +A G +LYE+I+ +
Sbjct: 330 LGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 119/242 (49%), Gaps = 24/242 (9%)
Query: 246 GTPTSLNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRL 305
G S+ I + V+ +E+ + F + +GQG FG V+ L + S +L
Sbjct: 1 GAMGSIKEIAITHHVKEGHEKADPS--QFELLKVLGQGSFGKVF---LVKKISGSDARQL 55
Query: 306 ICVNLLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIEN 364
+ +L +KA +K D ++ E +L V+H +V+L + EG L+L+ +++
Sbjct: 56 YAMKVL-KKATLKVRDRVRTK---MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRG 111
Query: 365 GNL----SEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDK 420
G+L S+ + + D + + + +ALD H H++ + I+RD+K NIL+D+
Sbjct: 112 GDLFTRLSKEVMFTEEDVKFYLAELALALD--------HLHSLGI-IYRDLKPENILLDE 162
Query: 421 NFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
H K+ DFGL+K + GT YM PE + D ++FGV+++E++
Sbjct: 163 EGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 221
Query: 481 SA 482
+
Sbjct: 222 TG 223
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 122/244 (50%), Gaps = 27/244 (11%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D+F ++G G G V+ + G +LI + + K AI+ + + E
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHK-PSGLVMARKLIHLEI---KPAIRN-------QIIRE 73
Query: 332 LKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
L+VL + +V G + +G + + E+++ G+L + L+ +GR P +V IA+
Sbjct: 74 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV- 132
Query: 391 SARGLEYIHE-HTVPVYIHRDIKSANILIDKNFHAKVADFGLT-KLTEVGSASLPTRLVG 448
+GL Y+ E H + +HRD+K +NIL++ K+ DFG++ +L + S+ VG
Sbjct: 133 -IKGLTYLREKHKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVG 184
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLN 508
T YM PE Q S + D+++ G+ L E+ + I G+GS A + L + ++N
Sbjct: 185 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMA----IFELLDYIVN 240
Query: 509 LPDP 512
P P
Sbjct: 241 EPPP 244
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 280 IGQGGFGAVYYAELR--GEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTH 337
IG G FG V L+ G+ R I V + K+ + + R+FL+E ++
Sbjct: 15 IGAGEFGEVCSGHLKLPGK-------REIFVAIKTLKSGYTE---KQRRDFLSEASIMGQ 64
Query: 338 VHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLE 396
H N++ L G + + + ++ E++ENG+L LR + V + A G++
Sbjct: 65 FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMK 123
Query: 397 YIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMP-- 454
Y+ + Y+HR + + NIL++ N KV+DFGL++ E S PT G +P
Sbjct: 124 YLADMN---YVHRALAARNILVNSNLVCKVSDFGLSRFLE-DDTSDPTYTSALGGKIPIR 179
Query: 455 ---PEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPD 511
PE QY + DV+++G+V++E++S E ++ ++ E+ LP
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY----WDMTNQDVINAIEQDYRLPP 235
Query: 512 PIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
P++ CP + QL C Q+ RP IV L
Sbjct: 236 PMD-------------CP----SALHQLMLDCWQKDRNHRPKFGQIVNTL 268
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 50/246 (20%)
Query: 253 AITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLM 312
A TVDK ++E+ IG GGFG V+ A+ R + G +Y+ + + N
Sbjct: 2 AHTVDKRFGMDFKEIEL----------IGSGGFGQVFKAKHRID-GKTYVIKRVKYN--- 47
Query: 313 QKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEG------------------S 354
+ +A RE +K L + H+N+V G C +G
Sbjct: 48 --------NEKAERE----VKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKC 94
Query: 355 LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSA 414
LF+ E+ + G L + + + L +++ +G++YIH + I+RD+K +
Sbjct: 95 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKL---INRDLKPS 151
Query: 415 NILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGV 474
NI + K+ DFGL +T + + R GT YM PE D +VD+YA G+
Sbjct: 152 NIFLVDTKQVKIGDFGL--VTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGL 209
Query: 475 VLYELI 480
+L EL+
Sbjct: 210 ILAELL 215
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 137/298 (45%), Gaps = 39/298 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELK----VL 335
+G+G FG V E N+ ++ A+K + ++ +A+LK +L
Sbjct: 29 LGEGHFGKVELCRYDPEGDNT-----------GEQVAVKSLKPESGGNHIADLKKEIEIL 77
Query: 336 THVHHLNLVRLIGYCVE---GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
+++H N+V+ G C E + L+ E++ +G+L E+L ++ + +++ A+
Sbjct: 78 RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQIC 136
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPT---RLVGT 449
+G++Y+ Y+HRD+ + N+L++ K+ DFGLTK E R
Sbjct: 137 KGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 193
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
F Y PE DV++FGV L+EL++ +DS + ALF +++
Sbjct: 194 FWYA-PECLMQSKFYIASDVWSFGVTLHELLTY---------CDSDSSPM-ALFLKMIGP 242
Query: 510 PDPIEDLRKLVDP-RLGDN--CPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
+ +LV+ + G CP + ++ QL + C + P R S ++++ L
Sbjct: 243 THGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 137/298 (45%), Gaps = 39/298 (13%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELK----VL 335
+G+G FG V E N+ ++ A+K + ++ +A+LK +L
Sbjct: 17 LGEGHFGKVELCRYDPEGDNT-----------GEQVAVKSLKPESGGNHIADLKKEIEIL 65
Query: 336 THVHHLNLVRLIGYCVE---GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
+++H N+V+ G C E + L+ E++ +G+L E+L ++ + +++ A+
Sbjct: 66 RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQIC 124
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPT---RLVGT 449
+G++Y+ Y+HRD+ + N+L++ K+ DFGLTK E R
Sbjct: 125 KGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 181
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
F Y PE DV++FGV L+EL++ +DS + ALF +++
Sbjct: 182 FWYA-PECLMQSKFYIASDVWSFGVTLHELLTY---------CDSDSSPM-ALFLKMIGP 230
Query: 510 PDPIEDLRKLVDP-RLGDN--CPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
+ +LV+ + G CP + ++ QL + C + P R S ++++ L
Sbjct: 231 THGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 288
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 118/238 (49%), Gaps = 24/238 (10%)
Query: 250 SLNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVN 309
S+ I + V+ +E+ + F + +GQG FG V+ L + S +L +
Sbjct: 4 SIKEIAITHHVKEGHEKADPS--QFELLKVLGQGSFGKVF---LVKKISGSDARQLYAMK 58
Query: 310 LLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNL- 367
+L +KA +K D ++ E +L V+H +V+L + EG L+L+ +++ G+L
Sbjct: 59 VL-KKATLKVRDRVRTK---MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 114
Query: 368 ---SEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA 424
S+ + + D + + + +ALD H H++ + I+RD+K NIL+D+ H
Sbjct: 115 TRLSKEVMFTEEDVKFYLAELALALD--------HLHSLGI-IYRDLKPENILLDEEGHI 165
Query: 425 KVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
K+ DFGL+K + GT YM PE + D ++FGV+++E+++
Sbjct: 166 KLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 118/238 (49%), Gaps = 24/238 (10%)
Query: 250 SLNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVN 309
S+ I + V+ +E+ + F + +GQG FG V+ L + S +L +
Sbjct: 4 SIKEIAITHHVKEGHEKADPS--QFELLKVLGQGSFGKVF---LVKKISGSDARQLYAMK 58
Query: 310 LLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNL- 367
+L +KA +K D ++ E +L V+H +V+L + EG L+L+ +++ G+L
Sbjct: 59 VL-KKATLKVRDRVRTK---MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 114
Query: 368 ---SEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA 424
S+ + + D + + + +ALD H H++ + I+RD+K NIL+D+ H
Sbjct: 115 TRLSKEVMFTEEDVKFYLAELALALD--------HLHSLGI-IYRDLKPENILLDEEGHI 165
Query: 425 KVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
K+ DFGL+K + GT YM PE + D ++FGV+++E+++
Sbjct: 166 KLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 32/277 (11%)
Query: 295 GEYGNSYLSRLICVNLLMQKAAIKKMDM----QASREFLAELKVLTHVHHLNLVRLIGYC 350
GE+G RL AIK + + + R+FL E ++ H N++ L G
Sbjct: 33 GEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVV 92
Query: 351 VEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHR 409
+ + +V EY+ENG+L L+ + V + + G++Y+ + Y+HR
Sbjct: 93 TKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLRGISAGMKYLSDMG---YVHR 148
Query: 410 DIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT--FGYMPPEYAQYGDVSPKV 467
D+ + NILI+ N KV+DFGL+++ E + T G + PE + +
Sbjct: 149 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSAS 208
Query: 468 DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDN 527
DV+++G+V++E++S E ++ ++ EE LP P+ +
Sbjct: 209 DVWSYGIVMWEVVSYGERPY----WEMTNQDVIKAVEEGYRLPSPM-------------D 251
Query: 528 CPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
CP + QL C Q+ RP IV L L
Sbjct: 252 CP----AALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 131/282 (46%), Gaps = 50/282 (17%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F + IG+G FG V +L+ ++ + +L + +K+ + RE
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNA------DKVFAMKILNKWEMLKRAETACFREERDV 127
Query: 332 L-----KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLP------ 380
L K +T +H+ + + +L+LV +Y G+L L D LP
Sbjct: 128 LVNGDSKWITTLHY-------AFQDDNNLYLVMDYYVGGDLLT-LLSKFEDRLPEEMARF 179
Query: 381 WSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFG-LTKLTEVGS 439
+ + + IA+DS L Y+H RDIK NIL+D N H ++ADFG KL E G+
Sbjct: 180 YLAEMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230
Query: 440 ASLPTRLVGTFGYMPPEYAQ-----YGDVSPKVDVYAFGVVLYELISAK-----EAIVKG 489
+ VGT Y+ PE Q G P+ D ++ GV +YE++ + E++V+
Sbjct: 231 VQ-SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 289
Query: 490 NGSSADSKGLVALFEEVLNLPDPIEDL-RKLV---DPRLGDN 527
G + K +V ++ + +DL R+L+ + RLG N
Sbjct: 290 YGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQN 331
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 20/245 (8%)
Query: 331 ELKVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI 387
E+ +L ++H ++++ G C + SL LV EY+ G+L ++L R + + +
Sbjct: 83 EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLF 139
Query: 388 ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLV 447
A G+ Y+H YIHRD+ + N+L+D + K+ DFGL K G R
Sbjct: 140 AQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVRED 196
Query: 448 G---TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFE 504
G F Y P +Y DV++FGV LYEL++ ++ + G+
Sbjct: 197 GDSPVFWYAPECLKEY-KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM 255
Query: 505 EVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
VL L + +E +L P D CP + + L K C + RP+ +++ L T+
Sbjct: 256 TVLRLTELLERGERLPRP---DKCPAE----VYHLMKNCWETEASFRPTFENLIPILKTV 308
Query: 565 SSTTE 569
+
Sbjct: 309 HEKYQ 313
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 28/215 (13%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS-REFLAE 331
++ + +G G FG V + G L+ ++ + I+ +D+ R +
Sbjct: 17 HYILGDTLGVGTFGKV-------KVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQN 69
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
LK+ H H + L ++I +F+V EY+ G L +++ +GR S R+ + S
Sbjct: 70 LKLFRHPHIIKLYQVIS--TPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS 127
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFG 451
G++Y H H V +HRD+K N+L+D + +AK+ADFGL+ + G + G+
Sbjct: 128 --GVDYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS--CGSPN 180
Query: 452 YMPPE------YAQYGDVSPKVDVYAFGVVLYELI 480
Y PE YA P+VD+++ GV+LY L+
Sbjct: 181 YAAPEVISGRLYA-----GPEVDIWSSGVILYALL 210
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 130/299 (43%), Gaps = 54/299 (18%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV- 338
+G+G +G V+ +GE A+K + + + E ++ V
Sbjct: 45 VGKGRYGEVWRGSWQGE-----------------NVAVKIFSSRDEKSWFRETELYNTVM 87
Query: 339 -HHLNLVRLIGYCVEG-----SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
H N++ I + L+L+ Y E G+L ++L+ + D + S ++I L A
Sbjct: 88 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV---SCLRIVLSIA 144
Query: 393 RGLEYIH-----EHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR-- 445
GL ++H P HRD+KS NIL+ KN +AD GL + + L
Sbjct: 145 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 204
Query: 446 -LVGTFGYMPPEYAQYG------DVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKG 498
VGT YM PE D +VD++AFG+VL+E+ A+ + NG D K
Sbjct: 205 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV--SNGIVEDYKP 260
Query: 499 LVALFEEVLNLPDPIEDLRKLV-----DPRLGDNCPLDSVL-KMAQLAKVCTQEYPQLR 551
++ V N P ED+RK+V P + + D L +A+L K C + P R
Sbjct: 261 --PFYDVVPNDPS-FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 316
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 39/220 (17%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS-----REFLAELKV 334
+G+G FG+V L+ E G S K A+K M + S EFL+E
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSL------------KVAVKTMKLDNSSQREIEEFLSEAAC 89
Query: 335 LTHVHHLNLVRLIGYCVEGSL------FLVYEYIENGNLSEHLRGS----GRDPLPWSSR 384
+ H N++RL+G C+E S ++ +++ G+L +L S G +P +
Sbjct: 90 MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL 149
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPT 444
++ +D A G+EY+ ++HRD+ + N ++ + VADFGL+K G
Sbjct: 150 LKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG 206
Query: 445 RLVGTFGYMPPEYAQYGDVSPKV-----DVYAFGVVLYEL 479
R+ MP ++ ++ +V DV+AFGV ++E+
Sbjct: 207 RIAK----MPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 134/300 (44%), Gaps = 45/300 (15%)
Query: 278 HKIGQGGFGAV---YYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---REFLAE 331
++G+G FG+V Y L+ G + A+KK+ R+F E
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTG--------------EVVAVKKLQHSTEEHLRDFERE 62
Query: 332 LKVLTHVHHLNLVRLIGYCVEG---SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
+++L + H N+V+ G C +L L+ EY+ G+L ++L+ ++ + +Q
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYT 121
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+G+EY+ YIHR++ + NIL++ K+ DFGLTK+ + G
Sbjct: 122 SQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPG 178
Query: 449 T---FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
F Y P + S DV++FGVVLYEL + I K A+ ++ ++
Sbjct: 179 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQ 234
Query: 506 ----VLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
V +L + +++ +L P D CP + + M + C RPS R + + +
Sbjct: 235 GQMIVFHLIELLKNNGRLPRP---DGCPDEIYMIMTE----CWNNNVNQRPSFRDLALRV 287
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 130/299 (43%), Gaps = 54/299 (18%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV- 338
+G+G +G V+ +GE A+K + + + E ++ V
Sbjct: 16 VGKGRYGEVWRGSWQGE-----------------NVAVKIFSSRDEKSWFRETELYNTVM 58
Query: 339 -HHLNLVRLIGYCVEG-----SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
H N++ I + L+L+ Y E G+L ++L+ + D + S ++I L A
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV---SCLRIVLSIA 115
Query: 393 RGLEYIH-----EHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR-- 445
GL ++H P HRD+KS NIL+ KN +AD GL + + L
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 446 -LVGTFGYMPPEYAQYG------DVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKG 498
VGT YM PE D +VD++AFG+VL+E+ A+ + NG D K
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV--SNGIVEDYKP 231
Query: 499 LVALFEEVLNLPDPIEDLRKLV-----DPRLGDNCPLDSVL-KMAQLAKVCTQEYPQLR 551
++ V N P ED+RK+V P + + D L +A+L K C + P R
Sbjct: 232 --PFYDVVPNDPS-FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 130/299 (43%), Gaps = 54/299 (18%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV- 338
+G+G +G V+ +GE A+K + + + E ++ V
Sbjct: 16 VGKGRYGEVWRGSWQGE-----------------NVAVKIFSSRDEKSWFRETELYNTVM 58
Query: 339 -HHLNLVRLIGYCVEG-----SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
H N++ I + L+L+ Y E G+L ++L+ + D + S ++I L A
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV---SCLRIVLSIA 115
Query: 393 RGLEYIH-----EHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR-- 445
GL ++H P HRD+KS NIL+ KN +AD GL + + L
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 446 -LVGTFGYMPPEYAQYG------DVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKG 498
VGT YM PE D +VD++AFG+VL+E+ A+ + NG D K
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV--SNGIVEDYKP 231
Query: 499 LVALFEEVLNLPDPIEDLRKLV-----DPRLGDNCPLDSVL-KMAQLAKVCTQEYPQLR 551
++ V N P ED+RK+V P + + D L +A+L K C + P R
Sbjct: 232 --PFYDVVPNDPS-FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 20/240 (8%)
Query: 331 ELKVLTHVHHLNLVRLIGYCV---EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI 387
E+ +L ++H ++++ G C E SL LV EY+ G+L ++L R + + +
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLF 122
Query: 388 ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLV 447
A G+ Y+H YIHR++ + N+L+D + K+ DFGL K G R
Sbjct: 123 AQQICEGMAYLHSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 179
Query: 448 G---TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFE 504
G F Y P +Y DV++FGV LYEL++ ++ + G+
Sbjct: 180 GDSPVFWYAPECLKEY-KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM 238
Query: 505 EVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
VL L + +E +L P D CP + + L K C + RP+ +++ L T+
Sbjct: 239 TVLRLTELLERGERLPRP---DKCPCE----VYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 25/224 (11%)
Query: 267 LSKATD------NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKM 320
++ ATD N+ + IG+G F V A + R + V ++ K +
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKVKLAR------HVLTGREVAVKII-DKTQLNPT 56
Query: 321 DMQASREFLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPL 379
+Q + E++++ ++H N+V+L E +L+LV EY G + ++L GR
Sbjct: 57 SLQ---KLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE 113
Query: 380 PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGS 439
+ + SA ++Y H+ + +HRD+K+ N+L+D + + K+ADFG + VG+
Sbjct: 114 KEARAKFRQIVSA--VQYCHQKYI---VHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN 168
Query: 440 ASLPTRLVGTFGYMPPEYAQYGDVS-PKVDVYAFGVVLYELISA 482
L T G+ Y PE Q P+VDV++ GV+LY L+S
Sbjct: 169 -KLDT-FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 108/234 (46%), Gaps = 41/234 (17%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM------QASRE 327
FS +IG G FGAVY+A + NS + AIKKM + ++
Sbjct: 56 FSDLREIGHGSFGAVYFAR---DVRNS------------EVVAIKKMSYSGKQSNEKWQD 100
Query: 328 FLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
+ E++ L + H N ++ G Y E + +LV EY G+ S+ L + PL
Sbjct: 101 IIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLE-VHKKPLQEVEIAA 158
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL---P 443
+ + +GL Y+H H + IHRD+K+ NIL+ ++ GL KL + GSAS+
Sbjct: 159 VTHGALQGLAYLHSHNM---IHRDVKAGNILL--------SEPGLVKLGDFGSASIMAPA 207
Query: 444 TRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSA 494
VGT +M PE G KVDV++ G+ EL K + N SA
Sbjct: 208 NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 261
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 108/234 (46%), Gaps = 41/234 (17%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM------QASRE 327
FS +IG G FGAVY+A + NS + AIKKM + ++
Sbjct: 17 FSDLREIGHGSFGAVYFAR---DVRNS------------EVVAIKKMSYSGKQSNEKWQD 61
Query: 328 FLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
+ E++ L + H N ++ G Y E + +LV EY G+ S+ L + PL
Sbjct: 62 IIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLE-VHKKPLQEVEIAA 119
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL---P 443
+ + +GL Y+H H + IHRD+K+ NIL+ ++ GL KL + GSAS+
Sbjct: 120 VTHGALQGLAYLHSHNM---IHRDVKAGNILL--------SEPGLVKLGDFGSASIMAPA 168
Query: 444 TRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSA 494
VGT +M PE G KVDV++ G+ EL K + N SA
Sbjct: 169 NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 222
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 20/240 (8%)
Query: 331 ELKVLTHVHHLNLVRLIGYCV---EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI 387
E+ +L ++H ++++ G C E SL LV EY+ G+L ++L R + + +
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLF 122
Query: 388 ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLV 447
A G+ Y+H YIHR++ + N+L+D + K+ DFGL K G R
Sbjct: 123 AQQICEGMAYLHAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 179
Query: 448 G---TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFE 504
G F Y P +Y DV++FGV LYEL++ ++ + G+
Sbjct: 180 GDSPVFWYAPECLKEY-KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM 238
Query: 505 EVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTL 564
VL L + +E +L P D CP + + L K C + RP+ +++ L T+
Sbjct: 239 TVLRLTELLERGERLPRP---DKCPCE----VYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 119/253 (47%), Gaps = 41/253 (16%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE---FLA 330
++ KIGQG G VY A + G Q+ AI++M++Q + +
Sbjct: 22 YTRFEKIGQGASGTVYTA-MDVATG--------------QEVAIRQMNLQQQPKKELIIN 66
Query: 331 ELKVLTHVHHLNLVR-LIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ V+ + N+V L Y V L++V EY+ G+L++ + + D +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCR 123
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL-TKLTEVGSASLPTRLVG 448
+ + LE++H + V IHRDIKS NIL+ + K+ DFG ++T S + +VG
Sbjct: 124 ECLQALEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVG 178
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEA-----------IVKGNGSS--AD 495
T +M PE PKVD+++ G++ E+I + ++ NG+ +
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN 238
Query: 496 SKGLVALFEEVLN 508
+ L A+F + LN
Sbjct: 239 PEKLSAIFRDFLN 251
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 24/213 (11%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS-REFLAEL 332
F + K+G+G +G+VY A + E G Q AIK++ +++ +E + E+
Sbjct: 31 FDVLEKLGEGSYGSVYKA-IHKETG--------------QIVAIKQVPVESDLQEIIKEI 75
Query: 333 KVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
++ ++V+ G Y L++V EY G++S+ +R + L I +
Sbjct: 76 SIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT-LTEDEIATILQST 134
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT-KLTEVGSASLPTRLVGTF 450
+GLEY+H IHRDIK+ NIL++ HAK+ADFG+ +LT+ + ++GT
Sbjct: 135 LKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKR--NXVIGTP 189
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
+M PE Q + D+++ G+ E+ K
Sbjct: 190 FWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 36/285 (12%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V +G Y + + + V +L +A D E LAE V+ +
Sbjct: 18 ELGSGNFGTV----KKGYYQMKKVVKTVAVKILKNEAN----DPALKDELLAEANVMQQL 69
Query: 339 HHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYI 398
+ +VR+IG C S LV E E G L+++L+ + + + +++ + G++Y+
Sbjct: 70 DNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYL 127
Query: 399 HEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF--GYMPPE 456
E ++HRD+ + N+L+ +AK++DFGL+K + G + + PE
Sbjct: 128 EESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPE 184
Query: 457 YAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDL 516
Y S K DV++FGV+++E S + +G S + A+ E+
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE----VTAMLEK----------- 229
Query: 517 RKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
R+G CP +M L +C + RP ++ + L
Sbjct: 230 ----GERMG--CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 268
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F IG G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFERIKTIGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G++ HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + KVADFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 36/285 (12%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V +G Y + + + V +L +A D E LAE V+ +
Sbjct: 34 ELGSGNFGTV----KKGYYQMKKVVKTVAVKILKNEAN----DPALKDELLAEANVMQQL 85
Query: 339 HHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYI 398
+ +VR+IG C S LV E E G L+++L+ + + + +++ + G++Y+
Sbjct: 86 DNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYL 143
Query: 399 HEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF--GYMPPE 456
E ++HRD+ + N+L+ +AK++DFGL+K + G + + PE
Sbjct: 144 EESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
Query: 457 YAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDL 516
Y S K DV++FGV+++E S + +G S + A+ E+
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE----VTAMLEK----------- 245
Query: 517 RKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
R+G CP +M L +C + RP ++ + L
Sbjct: 246 ----GERMG--CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 284
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 36/285 (12%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V +G Y + + + V +L +A D E LAE V+ +
Sbjct: 34 ELGSGNFGTV----KKGYYQMKKVVKTVAVKILKNEAN----DPALKDELLAEANVMQQL 85
Query: 339 HHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYI 398
+ +VR+IG C S LV E E G L+++L+ + + + +++ + G++Y+
Sbjct: 86 DNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYL 143
Query: 399 HEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF--GYMPPE 456
E ++HRD+ + N+L+ +AK++DFGL+K + G + + PE
Sbjct: 144 EESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
Query: 457 YAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDL 516
Y S K DV++FGV+++E S + +G S + A+ E+
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE----VTAMLEK----------- 245
Query: 517 RKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
R+G CP +M L +C + RP ++ + L
Sbjct: 246 ----GERMG--CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 284
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F IG G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFERIKTIGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G++ HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + KVADFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F IG G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFERIKTIGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + KVADFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 45/240 (18%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+N +G G FG V A G + +S + V +L +KA D ++E
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYG-ISKTGVSIQVAVKMLKEKA-----DSSEREALMSE 98
Query: 332 LKVLTHV-HHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGS----GRDPLPWSSRV 385
LK++T + H N+V L+G C + G ++L++EY G+L +LR D + + ++
Sbjct: 99 LKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQK 158
Query: 386 QI-----------------ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVAD 428
++ A A+G+E++ + +HRD+ + N+L+ K+ D
Sbjct: 159 RLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC---VHRDLAARNVLVTHGKVVKICD 215
Query: 429 FGLTK-------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
FGL + G+A LP + +M PE G + K DV+++G++L+E+ S
Sbjct: 216 FGLARDIMSDSNYVVRGNARLPVK------WMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 119/253 (47%), Gaps = 41/253 (16%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE---FLA 330
++ KIGQG G VY A + G Q+ AI++M++Q + +
Sbjct: 22 YTRFEKIGQGASGTVYTA-MDVATG--------------QEVAIRQMNLQQQPKKELIIN 66
Query: 331 ELKVLTHVHHLNLVR-LIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ V+ + N+V L Y V L++V EY+ G+L++ + + D +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCR 123
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL-TKLTEVGSASLPTRLVG 448
+ + LE++H + V IHRDIKS NIL+ + K+ DFG ++T S + +VG
Sbjct: 124 ECLQALEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVG 178
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEA-----------IVKGNGSS--AD 495
T +M PE PKVD+++ G++ E+I + ++ NG+ +
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN 238
Query: 496 SKGLVALFEEVLN 508
+ L A+F + LN
Sbjct: 239 PEKLSAIFRDFLN 251
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 20/218 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYA-ELRG-EYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
+NF + +G G +G V+ ++ G + G Y +++ ++QKA + +
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKA-------KTTEHTR 106
Query: 330 AELKVLTHVHHLNLVRLIGYC--VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI 387
E +VL H+ + + Y E L L+ +YI G L HL S R+ VQI
Sbjct: 107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL--SQRERFT-EHEVQI 163
Query: 388 AL-DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
+ + LE++H+ + I+RDIK NIL+D N H + DFGL+K
Sbjct: 164 YVGEIVLALEHLHKLGI---IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF 220
Query: 447 VGTFGYMPPEYAQYGDV--SPKVDVYAFGVVLYELISA 482
GT YM P+ + GD VD ++ GV++YEL++
Sbjct: 221 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 118/261 (45%), Gaps = 33/261 (12%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAI-KKMDMQASREFLAE 331
NF + KIG+G F VY A L V + ++K I MD +A + + E
Sbjct: 33 NFRIEKKIGRGQFSEVYRAA----------CLLDGVPVALKKVQIFDLMDAKARADCIKE 82
Query: 332 LKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLS---EHLRGSGR---DPLPWSSR 384
+ +L ++H N+++ +E L +V E + G+LS +H + R + W
Sbjct: 83 IDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYF 142
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPT 444
VQ+ LE++H V +HRDIK AN+ I K+ D GL + + + +
Sbjct: 143 VQLC----SALEHMHSRRV---MHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS 195
Query: 445 RLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFE 504
LVGT YM PE + K D+++ G +LYE+ + + G + L E
Sbjct: 196 -LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY---GDKMNLYSLCKKIE 251
Query: 505 EVLNLPDP----IEDLRKLVD 521
+ P P E+LR+LV+
Sbjct: 252 QCDYPPLPSDHYSEELRQLVN 272
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 119/253 (47%), Gaps = 41/253 (16%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE---FLA 330
++ KIGQG G VY A + G Q+ AI++M++Q + +
Sbjct: 22 YTRFEKIGQGASGTVYTA-MDVATG--------------QEVAIRQMNLQQQPKKELIIN 66
Query: 331 ELKVLTHVHHLNLVR-LIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ V+ + N+V L Y V L++V EY+ G+L++ + + D +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCR 123
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL-TKLTEVGSASLPTRLVG 448
+ + LE++H + V IHRDIKS NIL+ + K+ DFG ++T S + +VG
Sbjct: 124 ECLQALEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVG 178
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEA-----------IVKGNGSS--AD 495
T +M PE PKVD+++ G++ E+I + ++ NG+ +
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN 238
Query: 496 SKGLVALFEEVLN 508
+ L A+F + LN
Sbjct: 239 PEKLSAIFRDFLN 251
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 36/285 (12%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V +G Y + + + V +L +A D E LAE V+ +
Sbjct: 14 ELGSGNFGTV----KKGYYQMKKVVKTVAVKILKNEAN----DPALKDELLAEANVMQQL 65
Query: 339 HHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYI 398
+ +VR+IG C S LV E E G L+++L+ + + + +++ + G++Y+
Sbjct: 66 DNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYL 123
Query: 399 HEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF--GYMPPE 456
E ++HRD+ + N+L+ +AK++DFGL+K + G + + PE
Sbjct: 124 EESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 180
Query: 457 YAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDL 516
Y S K DV++FGV+++E S + +G S + A+ E+
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE----VTAMLEK----------- 225
Query: 517 RKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
R+G CP +M L +C + RP ++ + L
Sbjct: 226 ----GERMG--CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 264
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 20/214 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAE--LRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+F + +GQG FG V+ R + G+ Y ++ ++KA +K D ++
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKV------LKKATLKVRDRVRTK---M 79
Query: 331 ELKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E +L V+H +V+L + EG L+L+ +++ G+L L ++ + V+ L
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYL 136
Query: 390 -DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ A GL+++H + I+RD+K NIL+D+ H K+ DFGL+K + G
Sbjct: 137 AELALGLDHLHSLGI---IYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFCG 192
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T YM PE S D +++GV+++E+++
Sbjct: 193 TVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 36/285 (12%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V +G Y + + + V +L +A D E LAE V+ +
Sbjct: 12 ELGSGNFGTV----KKGYYQMKKVVKTVAVKILKNEAN----DPALKDELLAEANVMQQL 63
Query: 339 HHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYI 398
+ +VR+IG C S LV E E G L+++L+ + + + +++ + G++Y+
Sbjct: 64 DNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYL 121
Query: 399 HEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF--GYMPPE 456
E ++HRD+ + N+L+ +AK++DFGL+K + G + + PE
Sbjct: 122 EESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 178
Query: 457 YAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDL 516
Y S K DV++FGV+++E S + +G S + A+ E+
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE----VTAMLEK----------- 223
Query: 517 RKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
R+G CP +M L +C + RP ++ + L
Sbjct: 224 ----GERMG--CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 262
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 36/285 (12%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V +G Y + + + V +L +A D E LAE V+ +
Sbjct: 32 ELGSGNFGTV----KKGYYQMKKVVKTVAVKILKNEAN----DPALKDELLAEANVMQQL 83
Query: 339 HHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYI 398
+ +VR+IG C S LV E E G L+++L+ + + + +++ + G++Y+
Sbjct: 84 DNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYL 141
Query: 399 HEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF--GYMPPE 456
E ++HRD+ + N+L+ +AK++DFGL+K + G + + PE
Sbjct: 142 EESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 198
Query: 457 YAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDL 516
Y S K DV++FGV+++E S + +G S + A+ E+
Sbjct: 199 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE----VTAMLEK----------- 243
Query: 517 RKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
R+G CP +M L +C + RP ++ + L
Sbjct: 244 ----GERMG--CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 282
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 28/216 (12%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE---FL 329
++ KIGQG G VY A + G Q+ AI++M++Q + +
Sbjct: 22 KYTRFEKIGQGASGTVYTA-MDVATG--------------QEVAIRQMNLQQQPKKELII 66
Query: 330 AELKVLTHVHHLNLVR-LIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+ V+ + N+V L Y V L++V EY+ G+L++ + + D +
Sbjct: 67 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVC 123
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL-TKLTEVGSASLPTRLV 447
+ + LE++H + V IHRDIKS NIL+ + K+ DFG ++T S + +V
Sbjct: 124 RECLQALEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMV 178
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
GT +M PE PKVD+++ G++ E+I +
Sbjct: 179 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 36/285 (12%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V +G Y + + + V +L +A D E LAE V+ +
Sbjct: 18 ELGSGNFGTV----KKGYYQMKKVVKTVAVKILKNEAN----DPALKDELLAEANVMQQL 69
Query: 339 HHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYI 398
+ +VR+IG C S LV E E G L+++L+ + + + +++ + G++Y+
Sbjct: 70 DNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYL 127
Query: 399 HEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF--GYMPPE 456
E ++HRD+ + N+L+ +AK++DFGL+K + G + + PE
Sbjct: 128 EESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 184
Query: 457 YAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDL 516
Y S K DV++FGV+++E S + +G S + A+ E+
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE----VTAMLEK----------- 229
Query: 517 RKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
R+G CP +M L +C + RP ++ + L
Sbjct: 230 ----GERMG--CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 268
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 36/285 (12%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V +G Y + + + V +L +A D E LAE V+ +
Sbjct: 24 ELGSGNFGTV----KKGYYQMKKVVKTVAVKILKNEAN----DPALKDELLAEANVMQQL 75
Query: 339 HHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYI 398
+ +VR+IG C S LV E E G L+++L+ + + + +++ + G++Y+
Sbjct: 76 DNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYL 133
Query: 399 HEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF--GYMPPE 456
E ++HRD+ + N+L+ +AK++DFGL+K + G + + PE
Sbjct: 134 EESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 190
Query: 457 YAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDL 516
Y S K DV++FGV+++E S + +G S + A+ E+
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE----VTAMLEK----------- 235
Query: 517 RKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
R+G CP +M L +C + RP ++ + L
Sbjct: 236 ----GERMG--CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 274
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 36/285 (12%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V +G Y + + + V +L +A D E LAE V+ +
Sbjct: 376 ELGSGNFGTV----KKGYYQMKKVVKTVAVKILKNEAN----DPALKDELLAEANVMQQL 427
Query: 339 HHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYI 398
+ +VR+IG C S LV E E G L+++L+ + + + +++ + G++Y+
Sbjct: 428 DNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYL 485
Query: 399 HEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF--GYMPPE 456
E ++HRD+ + N+L+ +AK++DFGL+K + G + + PE
Sbjct: 486 EESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 542
Query: 457 YAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDL 516
Y S K DV++FGV+++E S + +G S + A+ E+
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE----VTAMLEK----------- 587
Query: 517 RKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
R+G CP +M L +C + RP ++ + L
Sbjct: 588 ----GERMG--CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 626
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 45/235 (19%)
Query: 313 QKAAIKKMDM--QASREFL-AELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLS 368
++ A+KKMD+ Q RE L E+ ++ HH N+V + Y V L++V E++E G L+
Sbjct: 71 KQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALT 130
Query: 369 E---HLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAK 425
+ H R + + L R L Y+H V IHRDIKS +IL+ + K
Sbjct: 131 DIVTHTR------MNEEQIATVCLSVLRALSYLHNQGV---IHRDIKSDSILLTSDGRIK 181
Query: 426 VADFGLTKLTEVGSASLPTR--LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
++DFG S +P R LVGT +M PE +VD+++ G+++ E+I +
Sbjct: 182 LSDFGFCAQV---SKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
Query: 484 EAIVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVD---PRLGDNCPLDSVLK 535
N P P++ +R++ D PR+ D + SVL+
Sbjct: 239 PP--------------------YFNEP-PLQAMRRIRDSLPPRVKDLHKVSSVLR 272
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 33/279 (11%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G G FG V+ E G S + +C+ ++ K+ + QA + + + L H H
Sbjct: 39 LGSGVFGTVHKGVWIPE-GES-IKIPVCIKVIEDKSG--RQSFQAVTDHMLAIGSLDHAH 94
Query: 340 HLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIH 399
+VRL+G C SL LV +Y+ G+L +H+R R L + + A+G+ Y+
Sbjct: 95 ---IVRLLGLCPGSSLQLVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLE 150
Query: 400 EHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT-FGYMPPEYA 458
EH + +HR++ + N+L+ +VADFG+ L L T +M E
Sbjct: 151 EHGM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 207
Query: 459 QYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDLRK 518
+G + + DV+++GV ++EL++ A+ + L E +PD +E +
Sbjct: 208 HFGKYTHQSDVWSYGVTVWELMTF----------GAEPYAGLRLAE----VPDLLEKGER 253
Query: 519 LVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSI 557
L P++ C +D + M + C +RP+ + +
Sbjct: 254 LAQPQI---CTIDVYMVMVK----CWMIDENIRPTFKEL 285
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 33/279 (11%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G G FG V+ E G S + +C+ ++ K+ + QA + + + L H H
Sbjct: 21 LGSGVFGTVHKGVWIPE-GES-IKIPVCIKVIEDKSG--RQSFQAVTDHMLAIGSLDHAH 76
Query: 340 HLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIH 399
+VRL+G C SL LV +Y+ G+L +H+R R L + + A+G+ Y+
Sbjct: 77 ---IVRLLGLCPGSSLQLVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLE 132
Query: 400 EHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT-FGYMPPEYA 458
EH + +HR++ + N+L+ +VADFG+ L L T +M E
Sbjct: 133 EHGM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189
Query: 459 QYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDLRK 518
+G + + DV+++GV ++EL++ A+ + L E +PD +E +
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELMTF----------GAEPYAGLRLAE----VPDLLEKGER 235
Query: 519 LVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSI 557
L P++ C +D + M + C +RP+ + +
Sbjct: 236 LAQPQI---CTIDVYMVMVK----CWMIDENIRPTFKEL 267
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 124/247 (50%), Gaps = 27/247 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D+F ++G G G V+ + G +LI + + K AI+ + + E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPS-GLVMARKLIHLEI---KPAIRN-------QIIRE 54
Query: 332 LKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
L+VL + +V G + +G + + E+++ G+L + L+ +GR P +V IA+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV- 113
Query: 391 SARGLEYIHE-HTVPVYIHRDIKSANILIDKNFHAKVADFGLT-KLTEVGSASLPTRLVG 448
+GL Y+ E H + +HRD+K +NIL++ K+ DFG++ +L + S+ VG
Sbjct: 114 -IKGLTYLREKHKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVG 165
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFE---E 505
T YM PE Q S + D+++ G+ L E+ + I + + DS+ +A+FE
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD-AKEDSRPPMAIFELLDY 224
Query: 506 VLNLPDP 512
++N P P
Sbjct: 225 IVNEPPP 231
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 123/272 (45%), Gaps = 46/272 (16%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYEL------------ISAKEAIVKG-----NG 491
T Y+ PE + VD +A GV++YE+ I E IV G +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH 260
Query: 492 SSADSKGL------VALFEEVLNLPDPIEDLR 517
S+D K L V L + NLP+ + D++
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIK 292
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 128/285 (44%), Gaps = 36/285 (12%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG V +G Y + + + V +L +A D E LAE V+ +
Sbjct: 377 ELGSGNFGTV----KKGYYQMKKVVKTVAVKILKNEAN----DPALKDELLAEANVMQQL 428
Query: 339 HHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYI 398
+ +VR+IG C S LV E E G L+++L+ + + + +++ + G++Y+
Sbjct: 429 DNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYL 486
Query: 399 HEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF--GYMPPE 456
E ++HRD+ + N+L+ +AK++DFGL+K + G + + PE
Sbjct: 487 EESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 543
Query: 457 YAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDL 516
Y S K DV++FGV+++E S + +G S + A+ E+
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE----VTAMLEK----------- 588
Query: 517 RKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
R+G CP +M L +C + RP ++ + L
Sbjct: 589 ----GERMG--CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 627
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 30/306 (9%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G+G FG+V N+ L+ V L D Q R+F E+++L +
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNT--GALVAVKQLQHSGP----DQQ--RDFQREIQILKAL 69
Query: 339 HHLNLVRLIGYCV---EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGL 395
H +V+ G SL LV EY+ +G L + L+ R L S + + +G+
Sbjct: 70 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGM 128
Query: 396 EYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT---FGY 452
EY+ +HRD+ + NIL++ H K+ADFGL KL + R G F Y
Sbjct: 129 EYLGSRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 185
Query: 453 MPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDP 512
PE S + DV++FGVVLYEL + + K SA+ ++ +V L
Sbjct: 186 A-PESLSDNIFSRQSDVWSFGVVLYELFTYCD---KSCSPSAEFLRMMGCERDVPAL--- 238
Query: 513 IEDLRKLVDPRLGDNCPLDSVL--KMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTED 570
R L G P ++ +L K+C PQ RPS ++ L L S +
Sbjct: 239 ---CRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG 295
Query: 571 WDVGSF 576
+ +F
Sbjct: 296 CETHAF 301
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 112
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 172
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + + L G
Sbjct: 173 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT----LCG 221
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G G FG VY E + + + +L + K A+ EF+ E ++ +
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIP--VAIKILNETTGPK-----ANVEFMDEALIMASMD 98
Query: 340 HLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIH 399
H +LVRL+G C+ ++ LV + + +G L E++ +D + + + A+G+ Y+
Sbjct: 99 HPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVH-EHKDNIGSQLLLNWCVQIAKGMMYLE 157
Query: 400 EHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTE-------VGSASLPTRLVGTFGY 452
E + +HRD+ + N+L+ H K+ DFGL +L E +P + +
Sbjct: 158 ERRL---VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK------W 208
Query: 453 MPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
M E Y + + DV+++GV ++EL++
Sbjct: 209 MALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 18/239 (7%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
S AT + +IG G +G VY A R + +++ L V + + + RE
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKA--RDPHSGHFVA-LKSVRVPNGGGGGGGLPISTVRE 61
Query: 328 FLAELKVLTHVHHLNLVRLIGYCV------EGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+A L+ L H N+VRL+ C E + LV+E+++ +L +L + LP
Sbjct: 62 -VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 119
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+ + RGL+++H + + +HRD+K NIL+ K+ADFGL ++ A
Sbjct: 120 ETIKDLMRQFLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL 176
Query: 442 LPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
P +V T Y PE + VD+++ G + E+ K + GN S AD G +
Sbjct: 177 TP--VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK-PLFCGN-SEADQLGKI 231
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 331 ELKVLTHVHHLNLVRLIGYCV---EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI 387
E+++L ++H ++V+ G C E S+ LV EY+ G+L ++L R + + +
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLF 117
Query: 388 ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLV 447
A G+ Y+H YIHR + + N+L+D + K+ DFGL K G R
Sbjct: 118 AQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 174
Query: 448 G---TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFE 504
G F Y PE + DV++FGV LYEL++ ++ + + G
Sbjct: 175 GDSPVFWYA-PECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQM 233
Query: 505 EVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMT 563
VL L + +E +L P D CP + + L K C + RP+ +++V L T
Sbjct: 234 TVLRLTELLERGERLPRP---DRCPCE----IYHLMKNCWETEASFRPTFQNLVPILQT 285
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 331 ELKVLTHVHHLNLVRLIGYCV---EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI 387
E+++L ++H ++V+ G C E S+ LV EY+ G+L ++L R + + +
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLF 116
Query: 388 ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLV 447
A G+ Y+H YIHR + + N+L+D + K+ DFGL K G R
Sbjct: 117 AQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 173
Query: 448 G---TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFE 504
G F Y PE + DV++FGV LYEL++ ++ + + G
Sbjct: 174 GDSPVFWYA-PECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQM 232
Query: 505 EVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMT 563
VL L + +E +L P D CP + + L K C + RP+ +++V L T
Sbjct: 233 TVLRLTELLERGERLPRP---DRCPCE----IYHLMKNCWETEASFRPTFQNLVPILQT 284
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 107/224 (47%), Gaps = 45/224 (20%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM--QASREFL 329
DNF KIG+G G V A +R +L+ A+KKMD+ Q RE L
Sbjct: 154 DNFI---KIGEGSTGIVCIATVRSS------GKLV---------AVKKMDLRKQQRRELL 195
Query: 330 -AELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSE---HLRGSGRDPLPWSSR 384
E+ ++ H N+V + Y V L++V E++E G L++ H R +
Sbjct: 196 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---------MNE 246
Query: 385 VQIA---LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
QIA L + L +H V IHRDIKS +IL+ + K++DFG S
Sbjct: 247 EQIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKE 300
Query: 442 LPTR--LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
+P R LVGT +M PE P+VD+++ G+++ E++ +
Sbjct: 301 VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 344
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G G FG VY E + + + +L + K A+ EF+ E ++ +
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIP--VAIKILNETTGPK-----ANVEFMDEALIMASMD 75
Query: 340 HLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIH 399
H +LVRL+G C+ ++ LV + + +G L E++ +D + + + A+G+ Y+
Sbjct: 76 HPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVH-EHKDNIGSQLLLNWCVQIAKGMMYLE 134
Query: 400 EHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTE-------VGSASLPTRLVGTFGY 452
E + +HRD+ + N+L+ H K+ DFGL +L E +P + +
Sbjct: 135 ERRL---VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK------W 185
Query: 453 MPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
M E Y + + DV+++GV ++EL++
Sbjct: 186 MALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 135/317 (42%), Gaps = 54/317 (17%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV- 338
+G+G +G V+ GE A+K + + + E ++ V
Sbjct: 16 VGKGRYGEVWRGLWHGE-----------------SVAVKIFSSRDEQSWFRETEIYNTVL 58
Query: 339 -HHLNLVRLIGYCVEG-----SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
H N++ I + L+L+ Y E+G+L + L+ +P +++A+ +A
Sbjct: 59 LRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP---HLALRLAVSAA 115
Query: 393 RGLEYIHEHTV-----PVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP---T 444
GL ++H P HRD KS N+L+ N +AD GL + GS L
Sbjct: 116 CGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNN 175
Query: 445 RLVGTFGYMPPEYAQYG------DVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKG 498
VGT YM PE + D++AFG+VL+E+ A+ IV NG D +
Sbjct: 176 PRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIV--NGIVEDYRP 231
Query: 499 LVALFEEVLNLPDPIEDLRKLV-----DPRLGDNCPLDSVLK-MAQLAKVCTQEYPQLRP 552
++ V N P ED++K+V P + + D VL +AQ+ + C P R
Sbjct: 232 --PFYDVVPNDPS-FEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARL 288
Query: 553 SMRSIVVALMTLSSTTE 569
+ I L +S++ E
Sbjct: 289 TALRIKKTLQKISNSPE 305
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
N+ + IG+G F V A + R + + ++ K + +Q + E+
Sbjct: 13 NYRLLKTIGKGNFAKVKLAR------HILTGREVAIKII-DKTQLNPTSLQ---KLFREV 62
Query: 333 KVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIAL 389
+++ ++H N+V+L E +L+L+ EY G + ++L GR + S QI
Sbjct: 63 RIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV- 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
++Y H+ + +HRD+K+ N+L+D + + K+ADFG + VG L T G+
Sbjct: 122 ---SAVQYCHQKRI---VHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKLDT-FCGS 173
Query: 450 FGYMPPEYAQYGDVS-PKVDVYAFGVVLYELISA 482
Y PE Q P+VDV++ GV+LY L+S
Sbjct: 174 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 133/314 (42%), Gaps = 46/314 (14%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G+G FG+V N+ L+ V L D Q R+F E+++L +
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNT--GALVAVKQLQHSGP----DQQ--RDFQREIQILKAL 68
Query: 339 HHLNLVRLIGYCV---EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGL 395
H +V+ G SL LV EY+ +G L + L+ R L S + + +G+
Sbjct: 69 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGM 127
Query: 396 EYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT---FGY 452
EY+ +HRD+ + NIL++ H K+ADFGL KL + R G F Y
Sbjct: 128 EYLGSRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 184
Query: 453 MPPEYAQYGDVSPKVDVYAFGVVLYELI-------SAKEAIVKGNGSSADSKGLVALFEE 505
PE S + DV++FGVVLYEL S ++ GS D L L E
Sbjct: 185 A-PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLEL 243
Query: 506 VL---NLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALM 562
+ LP P CP + + +L K+C PQ RPS ++ L
Sbjct: 244 LEEGQRLPAP-------------PACPAE----VHELMKLCWAPSPQDRPSFSALGPQLD 286
Query: 563 TLSSTTEDWDVGSF 576
L S + + +F
Sbjct: 287 MLWSGSRGCETHAF 300
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 39/221 (17%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM--QASREFL 329
DNF KIG+G G V A +R +L+ A+KKMD+ Q RE L
Sbjct: 34 DNFI---KIGEGSTGIVCIATVRSS------GKLV---------AVKKMDLRKQQRRELL 75
Query: 330 -AELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSE---HLRGSGRDPLPWSSR 384
E+ ++ H N+V + Y V L++V E++E G L++ H R +
Sbjct: 76 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQI 129
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPT 444
+ L + L +H V IHRDIKS +IL+ + K++DFG S +P
Sbjct: 130 AAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPR 183
Query: 445 R--LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
R LVGT +M PE P+VD+++ G+++ E++ +
Sbjct: 184 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 224
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 39/221 (17%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM--QASREFL 329
DNF KIG+G G V A +R +L+ A+KKMD+ Q RE L
Sbjct: 32 DNFI---KIGEGSTGIVCIATVRSS------GKLV---------AVKKMDLRKQQRRELL 73
Query: 330 -AELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSE---HLRGSGRDPLPWSSR 384
E+ ++ H N+V + Y V L++V E++E G L++ H R +
Sbjct: 74 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQI 127
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPT 444
+ L + L +H V IHRDIKS +IL+ + K++DFG S +P
Sbjct: 128 AAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPR 181
Query: 445 R--LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
R LVGT +M PE P+VD+++ G+++ E++ +
Sbjct: 182 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 222
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 30/306 (9%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G+G FG+V N+ L+ V L D Q R+F E+++L +
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNT--GALVAVKQLQHSGP----DQQ--RDFQREIQILKAL 81
Query: 339 HHLNLVRLIGYCV---EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGL 395
H +V+ G SL LV EY+ +G L + L+ R L S + + +G+
Sbjct: 82 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGM 140
Query: 396 EYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT---FGY 452
EY+ +HRD+ + NIL++ H K+ADFGL KL + R G F Y
Sbjct: 141 EYLGSRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 197
Query: 453 MPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDP 512
PE S + DV++FGVVLYEL + + K SA+ ++ +V L
Sbjct: 198 A-PESLSDNIFSRQSDVWSFGVVLYELFTYCD---KSCSPSAEFLRMMGCERDVPALS-- 251
Query: 513 IEDLRKLVDPRLGDNCPLDSVL--KMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTED 570
R L G P ++ +L K+C PQ RPS ++ L L S +
Sbjct: 252 ----RLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG 307
Query: 571 WDVGSF 576
+ +F
Sbjct: 308 CETHAF 313
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 39/221 (17%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM--QASREFL 329
DNF KIG+G G V A +R +L+ A+KKMD+ Q RE L
Sbjct: 23 DNFI---KIGEGSTGIVCIATVRSS------GKLV---------AVKKMDLRKQQRRELL 64
Query: 330 -AELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSE---HLRGSGRDPLPWSSR 384
E+ ++ H N+V + Y V L++V E++E G L++ H R +
Sbjct: 65 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQI 118
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPT 444
+ L + L +H V IHRDIKS +IL+ + K++DFG S +P
Sbjct: 119 AAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPR 172
Query: 445 R--LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
R LVGT +M PE P+VD+++ G+++ E++ +
Sbjct: 173 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 213
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS--REFLA 330
N+ + IG+G F V L+R I + I K + +S ++
Sbjct: 15 NYRLLKTIGKGNFAKVK------------LARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 331 ELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E++++ ++H N+V+L E +L+LV EY G + ++L GR + +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
SA ++Y H+ + +HRD+K+ N+L+D + + K+ADFG + G+ L T G+
Sbjct: 123 VSA--VQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDT-FCGS 175
Query: 450 FGYMPPEYAQYGDVS-PKVDVYAFGVVLYELISA 482
Y PE Q P+VDV++ GV+LY L+S
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 39/221 (17%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM--QASREFL 329
DNF KIG+G G V A +R +L+ A+KKMD+ Q RE L
Sbjct: 27 DNFI---KIGEGSTGIVCIATVRSS------GKLV---------AVKKMDLRKQQRRELL 68
Query: 330 -AELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSE---HLRGSGRDPLPWSSR 384
E+ ++ H N+V + Y V L++V E++E G L++ H R +
Sbjct: 69 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQI 122
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPT 444
+ L + L +H V IHRDIKS +IL+ + K++DFG S +P
Sbjct: 123 AAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPR 176
Query: 445 R--LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
R LVGT +M PE P+VD+++ G+++ E++ +
Sbjct: 177 RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS--REFLA 330
N+ + IG+G F V L+R I + I K + +S ++
Sbjct: 15 NYRLLKTIGKGNFAKVK------------LARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 331 ELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E++++ ++H N+V+L E +L+LV EY G + ++L GR + +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
SA ++Y H+ + +HRD+K+ N+L+D + + K+ADFG + G+ L T G+
Sbjct: 123 VSA--VQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDT-FCGS 175
Query: 450 FGYMPPEYAQYGDVS-PKVDVYAFGVVLYELISA 482
Y PE Q P+VDV++ GV+LY L+S
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 44/254 (17%)
Query: 251 LNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNL 310
L+++ + ++ E++ F++ +G+G FG+V A+L+ E G+
Sbjct: 2 LDSLGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGS----------- 50
Query: 311 LMQKAAIK--KMDMQAS---REFLAELKVLTHVHHLNLVRLIGYCV----EGSL---FLV 358
K A+K K D+ AS EFL E + H ++ +L+G + +G L ++
Sbjct: 51 -FVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVI 109
Query: 359 YEYIENGNLSEHLRGS--GRDP--LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSA 414
++++G+L L S G +P LP + V+ +D A G+EY+ +IHRD+ +
Sbjct: 110 LPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAAR 166
Query: 415 NILIDKNFHAKVADFGLTKLTEVG-------SASLPTRLVGTFGYMPPEYAQYGDVSPKV 467
N ++ ++ VADFGL++ G ++ LP + + Y +
Sbjct: 167 NCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHS------ 220
Query: 468 DVYAFGVVLYELIS 481
DV+AFGV ++E+++
Sbjct: 221 DVWAFGVTMWEIMT 234
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 28/215 (13%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE---FLA 330
++ KIGQG G VY A + G Q+ AI++M++Q + +
Sbjct: 23 YTRFEKIGQGASGTVYTA-MDVATG--------------QEVAIRQMNLQQQPKKELIIN 67
Query: 331 ELKVLTHVHHLNLVR-LIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ V+ + N+V L Y V L++V EY+ G+L++ + + D +
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCR 124
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL-TKLTEVGSASLPTRLVG 448
+ + LE++H + V IHR+IKS NIL+ + K+ DFG ++T S + +VG
Sbjct: 125 ECLQALEFLHSNQV---IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVG 179
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T +M PE PKVD+++ G++ E+I +
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 107/224 (47%), Gaps = 45/224 (20%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM--QASREFL 329
DNF KIG+G G V A +R +L+ A+KKMD+ Q RE L
Sbjct: 77 DNFI---KIGEGSTGIVCIATVRSS------GKLV---------AVKKMDLRKQQRRELL 118
Query: 330 -AELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSE---HLRGSGRDPLPWSSR 384
E+ ++ H N+V + Y V L++V E++E G L++ H R +
Sbjct: 119 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---------MNE 169
Query: 385 VQIA---LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
QIA L + L +H V IHRDIKS +IL+ + K++DFG S
Sbjct: 170 EQIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQV---SKE 223
Query: 442 LPTR--LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
+P R LVGT +M PE P+VD+++ G+++ E++ +
Sbjct: 224 VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 267
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 122/272 (44%), Gaps = 46/272 (16%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 27 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 77
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 78 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 137
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + + L G
Sbjct: 138 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT----LCG 186
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYEL------------ISAKEAIVKG-----NG 491
T Y+ PE + VD +A GV++YE+ I E IV G +
Sbjct: 187 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH 246
Query: 492 SSADSKGL------VALFEEVLNLPDPIEDLR 517
S+D K L V L + NL D + D++
Sbjct: 247 FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIK 278
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LAG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS--REFLA 330
N+ + IG+G F V L+R I + I K + +S ++
Sbjct: 15 NYRLLKTIGKGNFAKVK------------LARHILTGKEVAVRIIDKTQLNSSSLQKLFR 62
Query: 331 ELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E++++ ++H N+V+L E +L+LV EY G + ++L GR + +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
SA ++Y H+ + +HRD+K+ N+L+D + + K+ADFG + G+ L T G+
Sbjct: 123 VSA--VQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDT-FCGS 175
Query: 450 FGYMPPEYAQYGDVS-PKVDVYAFGVVLYELISA 482
Y PE Q P+VDV++ GV+LY L+S
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 92
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 153 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 201
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHK-ETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 84
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 85 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV 144
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 145 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 193
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 86
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 87 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV 146
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 147 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 195
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 196 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LXG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHK-ETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 84
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 85 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 144
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 145 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 193
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 104/241 (43%), Gaps = 27/241 (11%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
+F IG+G FG V A + E V +L +KA +KK + + ++E
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAE------EVFYAVKVLQKKAILKK---KEEKHIMSER 89
Query: 333 KVL-THVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI-AL 389
VL +V H LV L + L+ V +YI G L HL+ R+ R + A
Sbjct: 90 NVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQ---RERCFLEPRARFYAA 146
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
+ A L Y+H + ++RD+K NIL+D H + DFGL K + S + GT
Sbjct: 147 EIASALGYLHSLNI---VYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGT 202
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
Y+ PE VD + G VLYE++ S+ +++ +LN
Sbjct: 203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY--------SRNTAEMYDNILNK 254
Query: 510 P 510
P
Sbjct: 255 P 255
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHK-ETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 92
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 153 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 201
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS--REFLA 330
N+ + IG+G F V L+R I + I K + +S ++
Sbjct: 15 NYRLLKTIGKGNFAKVK------------LARHILTGKEVAVRIIDKTQLNSSSLQKLFR 62
Query: 331 ELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E++++ ++H N+V+L E +L+LV EY G + ++L GR + +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
SA ++Y H+ + +HRD+K+ N+L+D + + K+ADFG + E + G+
Sbjct: 123 VSA--VQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLDEFCGS 175
Query: 450 FGYMPPEYAQYGDVS-PKVDVYAFGVVLYELISA 482
Y PE Q P+VDV++ GV+LY L+S
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 78
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 79 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 138
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 139 LT----FEYLHSLDL---IYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWX----LCG 187
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 188 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K +++ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKEIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N++ID+ + KV DFGL K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHK-ETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 92
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 153 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 201
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 112
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIV 172
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 173 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 221
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHK-ETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 92
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 153 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 201
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 92
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + + L G
Sbjct: 153 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT----LCG 201
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHK-ETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 112
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 172
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 173 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 221
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G FG V + R + +L ++ I K ++ + + E
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKA------TGRYYAMKILRKEVIIAKDEVAHT---VTE 58
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI-AL 389
+VL + H L L + L V EY G L HL R+ + R +
Sbjct: 59 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGA 115
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
+ LEY+H V ++RDIK N+++DK+ H K+ DFGL K A++ T GT
Sbjct: 116 EIVSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGT 171
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
Y+ PE + D VD + GVV+YE++ +
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
N+ + IG+G F V A + R + + ++ K + +Q + E+
Sbjct: 16 NYRLLKTIGKGNFAKVKLAR------HILTGREVAIKII-DKTQLNPTSLQ---KLFREV 65
Query: 333 KVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIAL 389
+++ ++H N+V+L E +L+L+ EY G + ++L GR + S QI
Sbjct: 66 RIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV- 124
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
++Y H+ + +HRD+K+ N+L+D + + K+ADFG + VG G
Sbjct: 125 ---SAVQYCHQKRI---VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL--DAFCGA 176
Query: 450 FGYMPPEYAQYGDVS-PKVDVYAFGVVLYELISA 482
Y PE Q P+VDV++ GV+LY L+S
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G FG V + R + +L ++ I K ++ + + E
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKA------TGRYYAMKILRKEVIIAKDEVAHT---VTE 55
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI-AL 389
+VL + H L L + L V EY G L HL R+ + R +
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGA 112
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
+ LEY+H V ++RDIK N+++DK+ H K+ DFGL K A++ T GT
Sbjct: 113 EIVSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGT 168
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
Y+ PE + D VD + GVV+YE++ +
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G FG V + R + +L ++ I K ++ + + E
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKA------TGRYYAMKILRKEVIIAKDEVAHT---VTE 55
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI-AL 389
+VL + H L L + L V EY G L HL R+ + R +
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGA 112
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
+ LEY+H V ++RDIK N+++DK+ H K+ DFGL K A++ T GT
Sbjct: 113 EIVSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGT 168
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
Y+ PE + D VD + GVV+YE++ +
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 121/272 (44%), Gaps = 46/272 (16%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYEL------------ISAKEAIVKG-----NG 491
T Y+ PE + VD +A GV++YE+ I E IV G +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH 260
Query: 492 SSADSKGL------VALFEEVLNLPDPIEDLR 517
S+D K L V L + NL D + D++
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIK 292
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 30/218 (13%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM--QASREFLA 330
++ + +G G FG V E + + V +L + I+ +D+ + RE +
Sbjct: 12 HYVLGDTLGVGTFGKVKIGE------HQLTGHKVAVKIL-NRQKIRSLDVVGKIKRE-IQ 63
Query: 331 ELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
LK+ H H + L ++I F+V EY+ G L +++ GR + R+ +
Sbjct: 64 NLKLFRHPHIIKLYQVIS--TPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL 121
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF 450
SA ++Y H H V +HRD+K N+L+D + +AK+ADFGL+ + G + G+
Sbjct: 122 SA--VDYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSP 174
Query: 451 GYMPPE------YAQYGDVSPKVDVYAFGVVLYELISA 482
Y PE YA P+VD+++ GV+LY L+
Sbjct: 175 NYAAPEVISGRLYA-----GPEVDIWSCGVILYALLCG 207
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 129/299 (43%), Gaps = 30/299 (10%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G+G FG+V N+ L+ V L D Q R+F E+++L +
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNT--GALVAVKQLQHSGP----DQQ--RDFQREIQILKAL 65
Query: 339 HHLNLVRLIGYCV---EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGL 395
H +V+ G L LV EY+ +G L + L+ R L S + + +G+
Sbjct: 66 HSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGM 124
Query: 396 EYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT---FGY 452
EY+ +HRD+ + NIL++ H K+ADFGL KL + R G F Y
Sbjct: 125 EYLGSRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY 181
Query: 453 MPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDP 512
PE S + DV++FGVVLYEL + + K SA+ ++ +V L
Sbjct: 182 A-PESLSDNIFSRQSDVWSFGVVLYELFTYCD---KSCSPSAEFLRMMGCERDVPAL--- 234
Query: 513 IEDLRKLVDPRLGDNCPLDSVL--KMAQLAKVCTQEYPQLRPSMRSIVVALMTLSSTTE 569
R L G P ++ +L K+C PQ RPS ++ L L S +
Sbjct: 235 ---CRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 290
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 30/218 (13%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM--QASREFLA 330
++ + +G G FG V E + + V +L + I+ +D+ + RE +
Sbjct: 12 HYVLGDTLGVGTFGKVKIGE------HQLTGHKVAVKIL-NRQKIRSLDVVGKIKRE-IQ 63
Query: 331 ELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
LK+ H H + L ++I F+V EY+ G L +++ GR + R+ +
Sbjct: 64 NLKLFRHPHIIKLYQVIS--TPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL 121
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF 450
SA ++Y H H V +HRD+K N+L+D + +AK+ADFGL+ + G + G+
Sbjct: 122 SA--VDYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS--CGSP 174
Query: 451 GYMPPE------YAQYGDVSPKVDVYAFGVVLYELISA 482
Y PE YA P+VD+++ GV+LY L+
Sbjct: 175 NYAAPEVISGRLYA-----GPEVDIWSCGVILYALLCG 207
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 19/186 (10%)
Query: 313 QKAAIKKMDMQASR----EFLAELKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENG-- 365
+K AIK+++++ + E L E++ ++ HH N+V + V+ L+LV + + G
Sbjct: 41 EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 100
Query: 366 -NLSEHLRGSGRDP---LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKN 421
++ +H+ G L S+ I + GLEY+H++ IHRD+K+ NIL+ ++
Sbjct: 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGED 157
Query: 422 FHAKVADFGLTKLTEVGSA----SLPTRLVGTFGYMPPE-YAQYGDVSPKVDVYAFGVVL 476
++ADFG++ G + VGT +M PE Q K D+++FG+
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 217
Query: 477 YELISA 482
EL +
Sbjct: 218 IELATG 223
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 121/272 (44%), Gaps = 46/272 (16%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYEL------------ISAKEAIVKG-----NG 491
T Y+ PE + VD +A GV++YE+ I E IV G +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH 260
Query: 492 SSADSKGL------VALFEEVLNLPDPIEDLR 517
S+D K L V L + NL D + D++
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIK 292
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N++ID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 19/186 (10%)
Query: 313 QKAAIKKMDMQASR----EFLAELKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENG-- 365
+K AIK+++++ + E L E++ ++ HH N+V + V+ L+LV + + G
Sbjct: 36 EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 95
Query: 366 -NLSEHLRGSGRDP---LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKN 421
++ +H+ G L S+ I + GLEY+H++ IHRD+K+ NIL+ ++
Sbjct: 96 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGED 152
Query: 422 FHAKVADFGLTKLTEVGSA----SLPTRLVGTFGYMPPE-YAQYGDVSPKVDVYAFGVVL 476
++ADFG++ G + VGT +M PE Q K D+++FG+
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 212
Query: 477 YELISA 482
EL +
Sbjct: 213 IELATG 218
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS--REFLA 330
N+ + IG+G F V L+R I + I K + +S ++
Sbjct: 15 NYRLLKTIGKGNFAKVK------------LARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 331 ELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E++++ ++H N+V+L E +L+LV EY G + ++L GR + +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
SA ++Y H+ + +HRD+K+ N+L+D + + K+ADFG + E + G
Sbjct: 123 VSA--VQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLDAFCGA 175
Query: 450 FGYMPPEYAQYGDVS-PKVDVYAFGVVLYELISA 482
Y PE Q P+VDV++ GV+LY L+S
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++Y++ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHK-ETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 92
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++ V+ LV+L + +L++V EY G + HLR GR +P QI
Sbjct: 93 KRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + KVADFG K + + L G
Sbjct: 153 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX----LCG 201
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHK-ETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 92
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY G + HLR GR +P QI
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N++ID+ + KV DFG K + + L G
Sbjct: 153 LT----FEYLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX----LCG 201
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 21/237 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
AT + +IG G +G VY A + + + + + + + + RE +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKAR------DPHSGHFVALKSVRVPNGEEGLPISTVRE-V 54
Query: 330 AELKVLTHVHHLNLVRLIGYCV------EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
A L+ L H N+VRL+ C E + LV+E+++ +L +L + LP +
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAET 113
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+ RGL+++H + + +HRD+K NIL+ K+ADFGL ++ A P
Sbjct: 114 IKDLMRQFLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP 170
Query: 444 TRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
+V T Y PE + VD+++ G + E+ K + GN S AD G +
Sbjct: 171 --VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK-PLFCGN-SEADQLGKI 223
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 36/230 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-- 327
+NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETEGV 45
Query: 328 ---FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPL 104
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 105 IKSYLFQLLQGLSFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 160
Query: 444 TRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
T V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 161 THEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 207
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 92
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 153 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 201
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 136/290 (46%), Gaps = 23/290 (7%)
Query: 229 GLVFPAYKTVESTGPAAGTPTSLNAITVDKSVEFSYEELSKATDNFSMSHKI-GQGGFGA 287
GL P + V + A L+++ + +++ + E +++ + ++ G+GGFG
Sbjct: 141 GLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGE 200
Query: 288 VYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLI 347
V+ +++ +L L +K K+ Q + + E K+L VH +V L
Sbjct: 201 VFACQMKA------TGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIVSLA 251
Query: 348 -GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR---GLEYIHEHTV 403
+ + L LV + G++ H+ D P + +A+ GLE++H+ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN-PGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 404 PVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR-LVGTFGYMPPEYAQYGD 462
I+RD+K N+L+D + + +++D GL E+ + T+ GT G+M PE +
Sbjct: 311 ---IYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEE 365
Query: 463 VSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVA-LFEEVLNLPD 511
VD +A GV LYE+I+A+ + G ++K L + E+ + PD
Sbjct: 366 YDFSVDYFALGVTLYEMIAAR-GPFRARGEKVENKELKQRVLEQAVTYPD 414
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 32/278 (11%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLS-RLICVNLLMQKAAIK------------ 318
+ +++ +IG+G +G V A E N+Y + +++ L+++A
Sbjct: 13 NQYTLKDEIGKGSYGVVKLA--YNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAP 70
Query: 319 ------KMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLR 372
+ ++ + +A LK L H + + LV ++ E L++V+E + G + E
Sbjct: 71 GGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME--- 127
Query: 373 GSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT 432
PL D +G+EY+H + IHRDIK +N+L+ ++ H K+ADFG++
Sbjct: 128 VPTLKPLSEDQARFYFQDLIKGIEYLHYQKI---IHRDIKPSNLLVGEDGHIKIADFGVS 184
Query: 433 KLTEVGSASLPTRLVGTFGYMPPE-YAQYGDV--SPKVDVYAFGVVLYELISAKEAIVKG 489
+ GS +L + VGT +M PE ++ + +DV+A GV LY + + +
Sbjct: 185 NEFK-GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243
Query: 490 NGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDN 527
SK + + E + PD EDL+ L+ L N
Sbjct: 244 RIMCLHSK-IKSQALEFPDQPDIAEDLKDLITRMLDKN 280
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 136/290 (46%), Gaps = 23/290 (7%)
Query: 229 GLVFPAYKTVESTGPAAGTPTSLNAITVDKSVEFSYEELSKATDNFSMSHKI-GQGGFGA 287
GL P + V + A L+++ + +++ + E +++ + ++ G+GGFG
Sbjct: 141 GLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGE 200
Query: 288 VYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLI 347
V+ +++ +L L +K K+ Q + + E K+L VH +V L
Sbjct: 201 VFACQMKA------TGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIVSLA 251
Query: 348 -GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR---GLEYIHEHTV 403
+ + L LV + G++ H+ D P + +A+ GLE++H+ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN-PGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 404 PVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR-LVGTFGYMPPEYAQYGD 462
I+RD+K N+L+D + + +++D GL E+ + T+ GT G+M PE +
Sbjct: 311 ---IYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEE 365
Query: 463 VSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVA-LFEEVLNLPD 511
VD +A GV LYE+I+A+ + G ++K L + E+ + PD
Sbjct: 366 YDFSVDYFALGVTLYEMIAAR-GPFRARGEKVENKELKQRVLEQAVTYPD 414
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 136/290 (46%), Gaps = 23/290 (7%)
Query: 229 GLVFPAYKTVESTGPAAGTPTSLNAITVDKSVEFSYEELSKATDNFSMSHKI-GQGGFGA 287
GL P + V + A L+++ + +++ + E +++ + ++ G+GGFG
Sbjct: 141 GLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGE 200
Query: 288 VYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLI 347
V+ +++ +L L +K K+ Q + + E K+L VH +V L
Sbjct: 201 VFACQMKA------TGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIVSLA 251
Query: 348 -GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR---GLEYIHEHTV 403
+ + L LV + G++ H+ D P + +A+ GLE++H+ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN-PGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 404 PVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR-LVGTFGYMPPEYAQYGD 462
I+RD+K N+L+D + + +++D GL E+ + T+ GT G+M PE +
Sbjct: 311 ---IYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEE 365
Query: 463 VSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVA-LFEEVLNLPD 511
VD +A GV LYE+I+A+ + G ++K L + E+ + PD
Sbjct: 366 YDFSVDYFALGVTLYEMIAAR-GPFRARGEKVENKELKQRVLEQAVTYPD 414
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 92
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV 152
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 153 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 201
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-- 327
+NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETEGV 45
Query: 328 ---FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPL 104
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 105 IKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 160
Query: 444 TRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
T V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 161 THEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 209
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-- 327
+NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETEGV 44
Query: 328 ---FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPL 103
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 104 IKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 159
Query: 444 TRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
T V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 160 THEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 208
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 44
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPL 103
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 160
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
T V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 161 Y-THEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 208
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 28/235 (11%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D+F ++G G G V + R G +LI + + K AI+ + + E
Sbjct: 16 DDFERISELGAGNGGVVTKVQHR-PSGLIMARKLIHLEI---KPAIRN-------QIIRE 64
Query: 332 LKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
L+VL + +V G + +G + + E+++ G+L + L+ + R P +V IA+
Sbjct: 65 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAV- 123
Query: 391 SARGLEYIHE-HTVPVYIHRDIKSANILIDKNFHAKVADFGLT-KLTEVGSASLPTRLVG 448
RGL Y+ E H + +HRD+K +NIL++ K+ DFG++ +L + S+ VG
Sbjct: 124 -LRGLAYLREKHQI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVG 175
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALF 503
T YM PE Q S + D+++ G+ L EL + I D+K L A+F
Sbjct: 176 TRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI-----PPPDAKELEAIF 225
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K +++ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKEIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N++ID+ + +V DFGL K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 36/230 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-- 327
+NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETEGV 45
Query: 328 ---FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPL 104
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 105 IKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 160
Query: 444 TRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
T V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 161 THEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 207
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 126/270 (46%), Gaps = 16/270 (5%)
Query: 267 LSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR 326
+ + ++F + + +G+G F VY AE + + + + ++ +KA K +Q +
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAE------SIHTGLEVAIKMIDKKAMYKAGMVQRVQ 59
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRV 385
E+K+ + H +++ L Y + + ++LV E NG ++ +L+ + P +
Sbjct: 60 N---EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK-PFSENEAR 115
Query: 386 QIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR 445
G+ Y+H H + +HRD+ +N+L+ +N + K+ADFGL ++ T
Sbjct: 116 HFMHQIITGMLYLHSHGI---LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT- 171
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
L GT Y+ PE A + DV++ G + Y L+ + + +K ++A +E
Sbjct: 172 LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM 231
Query: 506 VLNLPDPIEDL-RKLVDPRLGDNCPLDSVL 534
L +DL +L+ D L SVL
Sbjct: 232 PSFLSIEAKDLIHQLLRRNPADRLSLSSVL 261
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-- 327
+NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETEGV 44
Query: 328 ---FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPL 103
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 104 IKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 159
Query: 444 TRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
T V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 160 THEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 208
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 36/230 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-- 327
+NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETEGV 52
Query: 328 ---FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 53 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPL 111
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 112 IKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 167
Query: 444 TRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
T V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 168 THEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 214
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS--REFLA 330
N+ + IG+G F V L+R I + I K + +S ++
Sbjct: 15 NYRLLKTIGKGNFAKVK------------LARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 331 ELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+++ ++H N+V+L E +L+LV EY G + ++L GR + +
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI 122
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
SA ++Y H+ + +HRD+K+ N+L+D + + K+ADFG + E + G
Sbjct: 123 VSA--VQYCHQKFI---VHRDLKAENLLLDADXNIKIADFGFS--NEFTFGNKLDAFCGA 175
Query: 450 FGYMPPEYAQYGDVS-PKVDVYAFGVVLYELISA 482
Y PE Q P+VDV++ GV+LY L+S
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 50/289 (17%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E+ ++F + IG+G FG V +++ R+ + +L + +K+ +
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKN------TERIYAMKILNKWEMLKRAETAC 120
Query: 325 SRE-----FLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPL 379
RE + + +T +H+ + E L+LV +Y G+L L D L
Sbjct: 121 FREERDVLVNGDCQWITALHY-------AFQDENHLYLVMDYYVGGDLLT-LLSKFEDKL 172
Query: 380 P------WSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFG-LT 432
P + + +A+DS L Y+H RDIK N+L+D N H ++ADFG
Sbjct: 173 PEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCL 223
Query: 433 KLTEVGSASLPTRLVGTFGYMPPEYAQ-----YGDVSPKVDVYAFGVVLYELISAK---- 483
K+ + G+ + VGT Y+ PE Q G P+ D ++ GV +YE++ +
Sbjct: 224 KMNDDGTVQ-SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 282
Query: 484 -EAIVKGNGSSADSKGLVALFEEVLNLPDPIEDL-RKLV---DPRLGDN 527
E++V+ G + + V ++ + +DL ++L+ + RLG N
Sbjct: 283 AESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQN 331
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 122/272 (44%), Gaps = 46/272 (16%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN + + +L ++ +K ++ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHK-ETGNHF-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYEL------------ISAKEAIVKG-----NG 491
T Y+ PE + VD +A GV++YE+ I E IV G +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH 260
Query: 492 SSADSKGL------VALFEEVLNLPDPIEDLR 517
S+D K L V L + NL D + D++
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIK 292
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-- 327
+NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETEGV 49
Query: 328 ---FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 50 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPL 108
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 109 IKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 164
Query: 444 TRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
T V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 165 THEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 213
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 122/272 (44%), Gaps = 46/272 (16%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN + + +L ++ +K ++ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHK-ETGNHF-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYEL------------ISAKEAIVKG-----NG 491
T Y+ PE + VD +A GV++YE+ I E IV G +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH 260
Query: 492 SSADSKGL------VALFEEVLNLPDPIEDLR 517
S+D K L V L + NL D + D++
Sbjct: 261 FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIK 292
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 28/235 (11%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D+F ++G G G V+ + G +LI + + K AI+ + + E
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHK-PSGLVMARKLIHLEI---KPAIR-------NQIIRE 116
Query: 332 LKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
L+VL + +V G + +G + + E+++ G+L + L+ +GR P +V IA+
Sbjct: 117 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV- 175
Query: 391 SARGLEYIHE-HTVPVYIHRDIKSANILIDKNFHAKVADFGLT-KLTEVGSASLPTRLVG 448
+GL Y+ E H + +HRD+K +NIL++ K+ DFG++ +L + S+ VG
Sbjct: 176 -IKGLTYLREKHKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVG 227
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALF 503
T YM PE Q S + D+++ G+ L E+ + I D+K L +F
Sbjct: 228 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI-----PPPDAKELELMF 277
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 46
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E+++ +L + + S +P
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPL 105
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 162
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 163 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 210
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-- 327
+NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETEGV 45
Query: 328 ---FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPL 104
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 105 IKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 160
Query: 444 TRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
T V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 161 THEVVTLWYRAPEILLGXKY--YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 209
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 29/217 (13%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS--REFLA 330
N+ + IG+G F V L+R I + I K + +S ++
Sbjct: 8 NYRLLKTIGKGNFAKVK------------LARHILTGKEVAVKIIDKTQLNSSSLQKLFR 55
Query: 331 ELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E++++ ++H N+V+L E +L+LV EY G + ++L G W +
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-----WMKEKEARA 110
Query: 390 DSAR---GLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
+ ++Y H+ + +HRD+K+ N+L+D + + K+ADFG + G+ L T
Sbjct: 111 KFRQIVSAVQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDT-F 165
Query: 447 VGTFGYMPPEYAQYGDVS-PKVDVYAFGVVLYELISA 482
G+ Y PE Q P+VDV++ GV+LY L+S
Sbjct: 166 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 50/289 (17%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E+ ++F + IG+G FG V +++ R+ + +L + +K+ +
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKN------TERIYAMKILNKWEMLKRAETAC 136
Query: 325 SRE-----FLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPL 379
RE + + +T +H+ + E L+LV +Y G+L L D L
Sbjct: 137 FREERDVLVNGDCQWITALHY-------AFQDENHLYLVMDYYVGGDLLT-LLSKFEDKL 188
Query: 380 P------WSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFG-LT 432
P + + +A+DS L Y+H RDIK N+L+D N H ++ADFG
Sbjct: 189 PEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCL 239
Query: 433 KLTEVGSASLPTRLVGTFGYMPPEYAQ-----YGDVSPKVDVYAFGVVLYELISAK---- 483
K+ + G+ + VGT Y+ PE Q G P+ D ++ GV +YE++ +
Sbjct: 240 KMNDDGTVQ-SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 298
Query: 484 -EAIVKGNGSSADSKGLVALFEEVLNLPDPIEDL-RKLV---DPRLGDN 527
E++V+ G + + V ++ + +DL ++L+ + RLG N
Sbjct: 299 AESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQN 347
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 21/237 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
AT + +IG G +G VY A + + + + + + + + RE +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKAR------DPHSGHFVALKSVRVPNGEEGLPISTVRE-V 54
Query: 330 AELKVLTHVHHLNLVRLIGYCV------EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
A L+ L H N+VRL+ C E + LV+E+++ +L +L + LP +
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAET 113
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+ RGL+++H + + +HRD+K NIL+ K+ADFGL ++ A P
Sbjct: 114 IKDLMRQFLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAP 170
Query: 444 TRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
+V T Y PE + VD+++ G + E+ K + GN S AD G +
Sbjct: 171 --VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK-PLFCGN-SEADQLGKI 223
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 36/230 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-- 327
+NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETEGV 52
Query: 328 ---FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 53 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPL 111
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 112 IKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 167
Query: 444 TRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
T V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 168 THEVVTLWYRAPEILLGXKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 214
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 43
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPL 102
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 160 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 207
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 43
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPL 102
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 160 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 207
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 43
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPL 102
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 160 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 207
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 47
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 48 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPL 106
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 107 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 163
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 164 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 211
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 45
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPL 104
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 161
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 162 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 209
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 46
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPL 105
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 162
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 163 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 45
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPL 104
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 161
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 162 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 209
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 43
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPL 102
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 160 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 207
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 123/305 (40%), Gaps = 66/305 (21%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS----REFLAELKV 334
++G+ FG VY L G Q AIK + +A EF E +
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQ----------TQAVAIKTLKDKAEGPLREEFRHEAML 65
Query: 335 LTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLR--------GSGRD------PL 379
+ H N+V L+G + L +++ Y +G+L E L GS D L
Sbjct: 66 RARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSAL 125
Query: 380 PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK------ 433
V + A G+EY+ H V +H+D+ + N+L+ + K++D GL +
Sbjct: 126 EPPDFVHLVAQIAAGMEYLSSHHV---VHKDLATRNVLVYDKLNVKISDLGLFREVYAAD 182
Query: 434 -LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
+G++ LP R +M PE YG S D++++GVVL+E+ S G
Sbjct: 183 YYKLLGNSLLPIR------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS- 235
Query: 493 SADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRP 552
++ +V + LP P D+CP M + C E+P RP
Sbjct: 236 ---NQDVVEMIRNRQVLPCP-------------DDCPAWVYALMIE----CWNEFPSRRP 275
Query: 553 SMRSI 557
+ I
Sbjct: 276 RFKDI 280
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N++ID+ + KV DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN + + +L ++ +K ++ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHK-ETGNHF-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ P + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 44
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPL 103
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 160
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 161 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 208
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 46
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPL 105
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 162
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 163 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 210
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N++ID+ + KV DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 43
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPL 102
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 160 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 207
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 23/224 (10%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYA-ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR 326
S +D + + +G GG V+ A +LR L R + V +L A D
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLR-------LHRDVAVKVLRADLA---RDPSFYL 57
Query: 327 EFLAELKVLTHVHHLNLVRLI----GYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPW 381
F E + ++H +V + G L ++V EY++ L + + G P+
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTP 115
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSA 440
+++ D+ + L + H++ + IHRD+K ANI+I KV DFG+ + + + G++
Sbjct: 116 KRAIEVIADACQALNFSHQNGI---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 441 SLPTR-LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T ++GT Y+ PE A+ V + DVY+ G VLYE+++ +
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 46
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ + +L + + S +P
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPL 105
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 162
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 163 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 109/236 (46%), Gaps = 36/236 (15%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA--- 330
F+ +IG+G FG V+ N Q AIK +D++ + + +
Sbjct: 25 FTKLERIGKGSFGEVFKG---------------IDNRTQQVVAIKIIDLEEAEDEIEDIQ 69
Query: 331 -ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+ VL+ + + G ++GS L+++ EY+ G+ + LR D ++ ++
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEI 129
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT-KLTEVGSASLPTRLV 447
L +GL+Y+H IHRDIK+AN+L+ + K+ADFG+ +LT+ V
Sbjct: 130 L---KGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR--NTFV 181
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALF 503
GT +M PE Q K D+++ G+ EL KG ++D + LF
Sbjct: 182 GTPFWMAPEVIQQSAYDSKADIWSLGITAIEL-------AKGEPPNSDMHPMRVLF 230
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 45
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPL 104
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT 161
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 162 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 209
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 44
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPL 103
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT 160
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 161 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 208
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-- 327
+NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETEGV 44
Query: 328 ---FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPL 103
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 104 IKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 160
Query: 444 TRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 161 HEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 208
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 23/224 (10%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYA-ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR 326
S +D + + +G GG V+ A +LR L R + V +L A D
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLR-------LHRDVAVKVLRADLA---RDPSFYL 57
Query: 327 EFLAELKVLTHVHHLNLVRLIGY----CVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPW 381
F E + ++H +V + G L ++V EY++ L + + G P+
Sbjct: 58 RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTP 115
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSA 440
+++ D+ + L + H++ + IHRD+K ANI+I KV DFG+ + + + G++
Sbjct: 116 KRAIEVIADACQALNFSHQNGI---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 441 SLPTR-LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T ++GT Y+ PE A+ V + DVY+ G VLYE+++ +
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 45
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ + +L + + S +P
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPL 104
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 161
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 162 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 209
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 36/230 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-- 327
+NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETEGV 44
Query: 328 ---FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + S +P
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPL 103
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 104 IKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY- 159
Query: 444 TRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
T V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 160 THEVVTLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 206
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 123/305 (40%), Gaps = 66/305 (21%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS----REFLAELKV 334
++G+ FG VY L G Q AIK + +A EF E +
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQ----------TQAVAIKTLKDKAEGPLREEFRHEAML 82
Query: 335 LTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLR--------GSGRDPLPWSSR- 384
+ H N+V L+G + L +++ Y +G+L E L GS D S
Sbjct: 83 RARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSAL 142
Query: 385 -----VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK------ 433
V + A G+EY+ H V +H+D+ + N+L+ + K++D GL +
Sbjct: 143 EPPDFVHLVAQIAAGMEYLSSHHV---VHKDLATRNVLVYDKLNVKISDLGLFREVYAAD 199
Query: 434 -LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
+G++ LP R +M PE YG S D++++GVVL+E+ S G
Sbjct: 200 YYKLLGNSLLPIR------WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS- 252
Query: 493 SADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRP 552
++ +V + LP P D+CP M + C E+P RP
Sbjct: 253 ---NQDVVEMIRNRQVLPCP-------------DDCPAWVYALMIE----CWNEFPSRRP 292
Query: 553 SMRSI 557
+ I
Sbjct: 293 RFKDI 297
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 113/236 (47%), Gaps = 39/236 (16%)
Query: 273 NFSMSHKIGQGGFGAVYYA---ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
N + +G+G FG V A L+G G + + V +L + A+ ++ R+ L
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYT----TVAVKMLKENASPSEL-----RDLL 74
Query: 330 AELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGR------------ 376
+E VL V+H ++++L G C + G L L+ EY + G+L LR S +
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 377 ----------DPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKV 426
L + A ++G++Y+ E ++ +HRD+ + NIL+ + K+
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSL---VHRDLAARNILVAEGRKMKI 191
Query: 427 ADFGLTK-LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+DFGL++ + E S ++ +M E + + DV++FGV+L+E+++
Sbjct: 192 SDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-- 327
+NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETEGV 44
Query: 328 ---FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPL 103
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 104 IKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 160
Query: 444 TRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 161 HEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 208
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 36/230 (15%)
Query: 272 DNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE-- 327
+NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETEGV 46
Query: 328 ---FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 47 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPL 105
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 106 IKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 162
Query: 444 TRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 163 HEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 208
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G FG V + R + +L ++ I K ++ + + E
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKA------TGRYYAMKILRKEVIIAKDEVAHT---VTE 60
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI-AL 389
+VL + H L L + L V EY G L HL R+ + R +
Sbjct: 61 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGA 117
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
+ LEY+H V ++RDIK N+++DK+ H K+ DFGL K A++ GT
Sbjct: 118 EIVSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGT 173
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
Y+ PE + D VD + GVV+YE++ +
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G FG V + R + +L ++ I K ++ + + E
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKA------TGRYYAMKILRKEVIIAKDEVAHT---VTE 55
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI-AL 389
+VL + H L L + L V EY G L HL R+ + R +
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGA 112
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
+ LEY+H V ++RDIK N+++DK+ H K+ DFGL K A++ GT
Sbjct: 113 EIVSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGT 168
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
Y+ PE + D VD + GVV+YE++ +
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G FG V + R + +L ++ I K ++ + + E
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKA------TGRYYAMKILRKEVIIAKDEVAHT---VTE 55
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI-AL 389
+VL + H L L + L V EY G L HL R+ + R +
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGA 112
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
+ LEY+H V ++RDIK N+++DK+ H K+ DFGL K A++ GT
Sbjct: 113 EIVSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGT 168
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
Y+ PE + D VD + GVV+YE++ +
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G FG V + R + +L ++ I K ++ + + E
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKA------TGRYYAMKILRKEVIIAKDEVAHT---VTE 55
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI-AL 389
+VL + H L L + L V EY G L HL R+ + R +
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGA 112
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGT 449
+ LEY+H V ++RDIK N+++DK+ H K+ DFGL K A++ GT
Sbjct: 113 EIVSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGT 168
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
Y+ PE + D VD + GVV+YE++ +
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 46
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ + +L + + S +P
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPL 105
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT 162
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 163 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 210
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 14/221 (6%)
Query: 294 RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV-----HHLNLVRLIG 348
RG Y L RL + + +KK ++ E + ++ HV +H LV L
Sbjct: 19 RGSYAKVLLVRLKKTDRIYAMKVVKK-ELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 77
Query: 349 -YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYI 407
+ E LF V EY+ G+L H++ + LP + + + L Y+HE + I
Sbjct: 78 CFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHERGI---I 132
Query: 408 HRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKV 467
+RD+K N+L+D H K+ D+G+ K + + GT Y+ PE + D V
Sbjct: 133 YRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSV 191
Query: 468 DVYAFGVVLYELISAKEAI-VKGNGSSADSKGLVALFEEVL 507
D +A GV+++E+++ + + G+ + D LF+ +L
Sbjct: 192 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 232
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 22/225 (9%)
Query: 294 RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV-----HHLNLVRLIG 348
RG Y L RL + + +KK ++ E + ++ HV +H LV L
Sbjct: 30 RGSYAKVLLVRLKKTDRIYAMKVVKK-ELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 88
Query: 349 -YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLP----WSSRVQIALDSARGLEYIHEHTV 403
+ E LF V EY+ G+L H++ + P +S+ + +AL+ Y+HE +
Sbjct: 89 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN------YLHERGI 142
Query: 404 PVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDV 463
I+RD+K N+L+D H K+ D+G+ K + + GT Y+ PE + D
Sbjct: 143 ---IYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDY 198
Query: 464 SPKVDVYAFGVVLYELISAKEAI-VKGNGSSADSKGLVALFEEVL 507
VD +A GV+++E+++ + + G+ + D LF+ +L
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 243
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 28/235 (11%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D+F ++G G G V+ + G +LI + + K AI+ + + E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPS-GLVMARKLIHLEI---KPAIRN-------QIIRE 54
Query: 332 LKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
L+VL + +V G + +G + + E+++ G+L + L+ +GR P +V IA+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV- 113
Query: 391 SARGLEYIHE-HTVPVYIHRDIKSANILIDKNFHAKVADFGLT-KLTEVGSASLPTRLVG 448
+GL Y+ E H + +HRD+K +NIL++ K+ DFG++ +L + S+ VG
Sbjct: 114 -IKGLTYLREKHKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVG 165
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALF 503
T YM PE Q S + D+++ G+ L E+ + I D+K L +F
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI-----PPPDAKELELMF 215
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 28/235 (11%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D+F ++G G G V+ + G +LI + + K AI+ + + E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPS-GLVMARKLIHLEI---KPAIRN-------QIIRE 54
Query: 332 LKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
L+VL + +V G + +G + + E+++ G+L + L+ +GR P +V IA+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV- 113
Query: 391 SARGLEYIHE-HTVPVYIHRDIKSANILIDKNFHAKVADFGLT-KLTEVGSASLPTRLVG 448
+GL Y+ E H + +HRD+K +NIL++ K+ DFG++ +L + S+ VG
Sbjct: 114 -IKGLTYLREKHKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVG 165
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALF 503
T YM PE Q S + D+++ G+ L E+ + I D+K L +F
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI-----PPPDAKELELMF 215
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 135/290 (46%), Gaps = 23/290 (7%)
Query: 229 GLVFPAYKTVESTGPAAGTPTSLNAITVDKSVEFSYEELSKATDNFSMSHKI-GQGGFGA 287
GL P + V + A L++ + +++ + E +++ + ++ G+GGFG
Sbjct: 141 GLFQPLLRAVLAHLGQAPFQEFLDSKYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGE 200
Query: 288 VYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLI 347
V+ +++ +L L +K K+ Q + + E K+L VH +V L
Sbjct: 201 VFACQMKA------TGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIVSLA 251
Query: 348 -GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR---GLEYIHEHTV 403
+ + L LV + G++ H+ D P + +A+ GLE++H+ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN-PGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 404 PVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR-LVGTFGYMPPEYAQYGD 462
I+RD+K N+L+D + + +++D GL E+ + T+ GT G+M PE +
Sbjct: 311 ---IYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEE 365
Query: 463 VSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVA-LFEEVLNLPD 511
VD +A GV LYE+I+A+ + G ++K L + E+ + PD
Sbjct: 366 YDFSVDYFALGVTLYEMIAAR-GPFRARGEKVENKELKQRVLEQAVTYPD 414
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 21/237 (8%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
AT + +IG G +G VY A + + + + + + + + RE +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKAR------DPHSGHFVALKSVRVPNGEEGLPISTVRE-V 54
Query: 330 AELKVLTHVHHLNLVRLIGYCV------EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS 383
A L+ L H N+VRL+ C E + LV+E+++ +L +L + LP +
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAET 113
Query: 384 RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLP 443
+ RGL+++H + + +HRD+K NIL+ K+ADFGL ++ A P
Sbjct: 114 IKDLMRQFLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDP 170
Query: 444 TRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV 500
+V T Y PE + VD+++ G + E+ K + GN S AD G +
Sbjct: 171 --VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK-PLFCGN-SEADQLGKI 223
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 44
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ + +L + + S +P
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPL 103
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT 160
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 161 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 208
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+ +NF KIG+G +G VY A +L GE A+KK+ + E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-----------------VALKKIRLDTETE 46
Query: 328 -----FLAELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPW 381
+ E+ +L ++H N+V+L+ E L+LV+E++ +L + S +P
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPL 105
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS 441
+GL + H H V +HRD+K N+LI+ K+ADFGL + V +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 162
Query: 442 LPTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 163 YXHEVV-TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGD 210
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 23/224 (10%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYA-ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR 326
S +D + + +G GG V+ A +LR L R + V +L A D
Sbjct: 25 SHLSDRYELGEILGFGGMSEVHLARDLR-------LHRDVAVKVLRADLA---RDPSFYL 74
Query: 327 EFLAELKVLTHVHHLNLVRLI----GYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPW 381
F E + ++H +V + G L ++V EY++ L + + G P+
Sbjct: 75 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTP 132
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSA 440
+++ D+ + L + H++ + IHRD+K ANI+I KV DFG+ + + + G++
Sbjct: 133 KRAIEVIADACQALNFSHQNGI---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 189
Query: 441 SLPTR-LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
T ++GT Y+ PE A+ V + DVY+ G VLYE+++ +
Sbjct: 190 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 14/221 (6%)
Query: 294 RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV-----HHLNLVRLIG 348
RG Y L RL + + +KK ++ E + ++ HV +H LV L
Sbjct: 15 RGSYAKVLLVRLKKTDRIYAMKVVKK-ELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 73
Query: 349 -YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYI 407
+ E LF V EY+ G+L H++ + LP + + + L Y+HE + I
Sbjct: 74 CFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHERGI---I 128
Query: 408 HRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKV 467
+RD+K N+L+D H K+ D+G+ K + + GT Y+ PE + D V
Sbjct: 129 YRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSV 187
Query: 468 DVYAFGVVLYELISAKEAI-VKGNGSSADSKGLVALFEEVL 507
D +A GV+++E+++ + + G+ + D LF+ +L
Sbjct: 188 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 228
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 74/130 (56%), Gaps = 7/130 (5%)
Query: 356 FLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSAN 415
++V EY++ L + + G P+ +++ D+ + L + H++ + IHRD+K AN
Sbjct: 92 YIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGI---IHRDVKPAN 146
Query: 416 ILIDKNFHAKVADFGLTK-LTEVGSASLPTR-LVGTFGYMPPEYAQYGDVSPKVDVYAFG 473
ILI KV DFG+ + + + G++ T ++GT Y+ PE A+ V + DVY+ G
Sbjct: 147 ILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 474 VVLYELISAK 483
VLYE+++ +
Sbjct: 207 CVLYEVLTGE 216
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 28/235 (11%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D+F ++G G G V+ + G +LI + + K AI+ + + E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPS-GLVMARKLIHLEI---KPAIRN-------QIIRE 54
Query: 332 LKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
L+VL + +V G + +G + + E+++ G+L + L+ +GR P +V IA+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV- 113
Query: 391 SARGLEYIHE-HTVPVYIHRDIKSANILIDKNFHAKVADFGLT-KLTEVGSASLPTRLVG 448
+GL Y+ E H + +HRD+K +NIL++ K+ DFG++ +L + S+ VG
Sbjct: 114 -IKGLTYLREKHKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVG 165
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALF 503
T YM PE Q S + D+++ G+ L E+ + I D+K L +F
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI-----PPPDAKELELMF 215
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 28/235 (11%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D+F ++G G G V+ + G +LI + + K AI+ + + E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPS-GLVMARKLIHLEI---KPAIRN-------QIIRE 54
Query: 332 LKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
L+VL + +V G + +G + + E+++ G+L + L+ +GR P +V IA+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV- 113
Query: 391 SARGLEYIHE-HTVPVYIHRDIKSANILIDKNFHAKVADFGLT-KLTEVGSASLPTRLVG 448
+GL Y+ E H + +HRD+K +NIL++ K+ DFG++ +L + S+ VG
Sbjct: 114 -IKGLTYLREKHKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVG 165
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALF 503
T YM PE Q S + D+++ G+ L E+ + I D+K L +F
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI-----PPPDAKELELMF 215
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 26/227 (11%)
Query: 272 DNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
+NF KIG+G +G VY A +L GE RL + AI+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR----------- 51
Query: 330 AELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 52 -EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 109
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+GL + H H V +HRD+K N+LI+ K+ADFGL + V + T V
Sbjct: 110 FQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVV 165
Query: 449 TFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 166 TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 209
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 26/227 (11%)
Query: 272 DNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
+NF KIG+G +G VY A +L GE RL + AI+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR----------- 50
Query: 330 AELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+ +L ++H N+V+L+ E L+LV+E++ +L + + S +P
Sbjct: 51 -EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL 108
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+GL + H H V +HRD+K N+LI+ K+ADFGL + V + T V
Sbjct: 109 FQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY-THEVV 164
Query: 449 TFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
T Y PE +Y S VD+++ G + E+++ + A+ G+
Sbjct: 165 TLWYRAPEILLGCKY--YSTAVDIWSLGCIFAEMVT-RRALFPGDSE 208
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 28/235 (11%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D+F ++G G G V+ + G +LI + + K AI+ + + E
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHK-PSGLVMARKLIHLEI---KPAIRN-------QIIRE 81
Query: 332 LKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
L+VL + +V G + +G + + E+++ G+L + L+ +GR P +V IA+
Sbjct: 82 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV- 140
Query: 391 SARGLEYIHE-HTVPVYIHRDIKSANILIDKNFHAKVADFGLT-KLTEVGSASLPTRLVG 448
+GL Y+ E H + +HRD+K +NIL++ K+ DFG++ +L + S+ VG
Sbjct: 141 -IKGLTYLREKHKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVG 192
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALF 503
T YM PE Q S + D+++ G+ L E+ + I D+K L +F
Sbjct: 193 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI-----PPPDAKELELMF 242
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 36/215 (16%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA---AIKKMDMQASREFLAELKVL 335
KIG+G +G V+ N +++ + ++ IKK+ L E+++L
Sbjct: 10 KIGEGSYGVVFKCR------NRDTGQIVAIKKFLESEDDPVIKKIA-------LREIRML 56
Query: 336 THVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSE---HLRGSGRDPLPWSSRVQIALDS 391
+ H NLV L+ + + L LV+EY ++ L E + RG +P I +
Sbjct: 57 KQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG-----VPEHLVKSITWQT 111
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFG 451
+ + + H+H IHRD+K NILI K+ K+ DFG +L G + V T
Sbjct: 112 LQAVNFCHKHNC---IHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVATRW 167
Query: 452 YMPPEY----AQYGDVSPKVDVYAFGVVLYELISA 482
Y PE QYG P VDV+A G V EL+S
Sbjct: 168 YRSPELLVGDTQYG---PPVDVWAIGCVFAELLSG 199
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK-ESGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY+ G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N+LID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T + PE + VD +A GV++YE+ +
Sbjct: 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 22/225 (9%)
Query: 294 RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV-----HHLNLVRLIG 348
RG Y L RL + + +KK ++ E + ++ HV +H LV L
Sbjct: 62 RGSYAKVLLVRLKKTDRIYAMRVVKK-ELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 120
Query: 349 -YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLP----WSSRVQIALDSARGLEYIHEHTV 403
+ E LF V EY+ G+L H++ + P +S+ + +AL+ Y+HE +
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN------YLHERGI 174
Query: 404 PVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDV 463
I+RD+K N+L+D H K+ D+G+ K + + GT Y+ PE + D
Sbjct: 175 ---IYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILRGEDY 230
Query: 464 SPKVDVYAFGVVLYELISAKEAI-VKGNGSSADSKGLVALFEEVL 507
VD +A GV+++E+++ + + G+ + D LF+ +L
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 275
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 78/143 (54%), Gaps = 10/143 (6%)
Query: 356 FLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSAN 415
++V EY++ L + + G P+ +++ D+ + L + H++ + IHRD+K AN
Sbjct: 92 YIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGI---IHRDVKPAN 146
Query: 416 ILIDKNFHAKVADFGLTK-LTEVGSASLPTR-LVGTFGYMPPEYAQYGDVSPKVDVYAFG 473
I+I KV DFG+ + + + G++ T ++GT Y+ PE A+ V + DVY+ G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 474 VVLYELISAKEAIVKGNGSSADS 496
VLYE+++ + G S DS
Sbjct: 207 CVLYEVLTGEPPFT---GDSPDS 226
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 51/242 (21%)
Query: 273 NFSMSHKIGQGGFGAVYYA---ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
N + +G+G FG V A L+G G + + V +L + A+ ++ R+ L
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYT----TVAVKMLKENASPSEL-----RDLL 74
Query: 330 AELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGR------------ 376
+E VL V+H ++++L G C + G L L+ EY + G+L LR S +
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 377 ----------DPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKV 426
L + A ++G++Y+ E + +HRD+ + NIL+ + K+
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKL---VHRDLAARNILVAEGRKMKI 191
Query: 427 ADFGLTK-------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYEL 479
+DFGL++ + +P + + Y + + DV++FGV+L+E+
Sbjct: 192 SDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIY------TTQSDVWSFGVLLWEI 245
Query: 480 IS 481
++
Sbjct: 246 VT 247
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 123/301 (40%), Gaps = 40/301 (13%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICV--NLLMQKAAIKKMDMQASREFLA 330
+ + K+G G FG V E G + + C+ ++L Q A+ +F+
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD--------DFIR 64
Query: 331 ELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRG-SGRDPLPWSSRVQIAL 389
E+ + + H NL+RL G + + +V E G+L + LR G L SR A+
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AV 122
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS--LPTRLV 447
A G+ Y+ +IHRD+ + N+L+ K+ DFGL + +
Sbjct: 123 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS-AKEAIVKGNGSSADSKGLVALFEEV 506
F + PE + S D + FGV L+E+ + +E + NGS L + +E
Sbjct: 180 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI----LHKIDKEG 235
Query: 507 LNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSS 566
LP P ++CP D M Q C P+ RP+ ++ L+
Sbjct: 236 ERLPRP-------------EDCPQDIYNVMVQ----CWAHKPEDRPTFVALRDFLLEAQP 278
Query: 567 T 567
T
Sbjct: 279 T 279
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 116/264 (43%), Gaps = 34/264 (12%)
Query: 272 DNFSMSHKIGQGGFGAVYYAE---LRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREF 328
D+F + IG+G FG V + + Y Y+++ CV + R
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV------------ERNEVRNV 62
Query: 329 LAELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI 387
EL+++ + H LV L + E +F+V + + G+L HL+ + +
Sbjct: 63 FKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLF 120
Query: 388 ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLV 447
+ L+Y+ + IHRD+K NIL+D++ H + DF + + + + T +
Sbjct: 121 ICELVMALDYLQNQRI---IHRDMKPDNILLDEHGHVHITDFNIAAM--LPRETQITTMA 175
Query: 448 GTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFE 504
GT YM PE + S VD ++ GV YEL+ + SS SK +V FE
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY--HIRSSTSSKEIVHTFE 233
Query: 505 -EVLNLP-----DPIEDLRKLVDP 522
V+ P + + L+KL++P
Sbjct: 234 TTVVTYPSAWSQEMVSLLKKLLEP 257
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 111/252 (44%), Gaps = 54/252 (21%)
Query: 260 VEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKK 319
+E + E S DN + IG+G +GAVY L + A+K
Sbjct: 1 MEAAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDE-----------------RPVAVKV 43
Query: 320 MDMQASREFLAELKV--LTHVHHLNLVRLI----GYCVEGSL--FLVYEYIENGNLSEHL 371
+ F+ E + + + H N+ R I +G + LV EY NG+L ++L
Sbjct: 44 FSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL 103
Query: 372 RGSGRDPLPWSSRVQIALDSARGLEYIH------EHTVPVYIHRDIKSANILIDKNFHAK 425
D W S ++A RGL Y+H +H P HRD+ S N+L+ +
Sbjct: 104 SLHTSD---WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160
Query: 426 VADFGLT-KLT--------EVGSASLPTRLVGTFGYMPPEYAQYGDVS--------PKVD 468
++DFGL+ +LT E +A++ VGT YM PE + G V+ +VD
Sbjct: 161 ISDFGLSMRLTGNRLVRPGEEDNAAISE--VGTIRYMAPEVLE-GAVNLRDXESALKQVD 217
Query: 469 VYAFGVVLYELI 480
+YA G++ +E+
Sbjct: 218 MYALGLIYWEIF 229
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 91
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ LV+L + +L++V EY G + HLR GR +P QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N++ID+ + +V DFG K + + L G
Sbjct: 152 LT----FEYLHSLDL---IYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWX----LCG 200
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 48/244 (19%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
E+ +N +G G FG V A +G ++ V + M K+ + +A
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEAT---AFGLGKEDAVLKVAVKMLKSTAHADEKEA 95
Query: 325 SREFLAELKVLTHV-HHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLR---------- 372
++ELK+++H+ H N+V L+G C G + ++ EY G+L LR
Sbjct: 96 ---LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP 152
Query: 373 --------GSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA 424
S RD L +SS+V A+G+ ++ IHRD+ + N+L+ A
Sbjct: 153 AFAIANSTASTRDLLHFSSQV------AQGMAFLASKNC---IHRDVAARNVLLTNGHVA 203
Query: 425 KVADFGLTK-------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLY 477
K+ DFGL + G+A LP + +M PE + + DV+++G++L+
Sbjct: 204 KIGDFGLARDIMNDSNYIVKGNARLPVK------WMAPESIFDCVYTVQSDVWSYGILLW 257
Query: 478 ELIS 481
E+ S
Sbjct: 258 EIFS 261
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 51/242 (21%)
Query: 273 NFSMSHKIGQGGFGAVYYA---ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
N + +G+G FG V A L+G G + + V +L + A+ ++ R+ L
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYT----TVAVKMLKENASPSEL-----RDLL 74
Query: 330 AELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGR------------ 376
+E VL V+H ++++L G C + G L L+ EY + G+L LR S +
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 377 ----------DPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKV 426
L + A ++G++Y+ E + +HRD+ + NIL+ + K+
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKL---VHRDLAARNILVAEGRKMKI 191
Query: 427 ADFGLTK-------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYEL 479
+DFGL++ + +P + + Y + + DV++FGV+L+E+
Sbjct: 192 SDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIY------TTQSDVWSFGVLLWEI 245
Query: 480 IS 481
++
Sbjct: 246 VT 247
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 92
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ L +L + +L++V EY G + HLR GR +P QI
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N++ID+ + KV DFG K + + L G
Sbjct: 153 LT----FEYLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX----LCG 201
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 92
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ L +L + +L++V EY G + HLR GR +P QI
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N++ID+ + KV DFG K + + L G
Sbjct: 153 LT----FEYLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX----LCG 201
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 23/214 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F +G G FG V + E GN Y + +L ++ +K ++ + L E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVK-HMETGNHY-----AMKILDKQKVVKLKQIEHT---LNE 92
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGR--DPLPWSSRVQIA 388
++L V+ L +L + +L++V EY G + HLR GR +P QI
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIV 152
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L EY+H + I+RD+K N++ID+ + KV DFG K + + L G
Sbjct: 153 LT----FEYLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX----LCG 201
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T Y+ PE + VD +A GV++YE+ +
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 74/130 (56%), Gaps = 7/130 (5%)
Query: 356 FLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSAN 415
++V EY++ L + + G P+ +++ D+ + L + H++ + IHRD+K AN
Sbjct: 92 YIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGI---IHRDVKPAN 146
Query: 416 ILIDKNFHAKVADFGLTK-LTEVGSASLPTR-LVGTFGYMPPEYAQYGDVSPKVDVYAFG 473
I+I KV DFG+ + + + G++ T ++GT Y+ PE A+ V + DVY+ G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 474 VVLYELISAK 483
VLYE+++ +
Sbjct: 207 CVLYEVLTGE 216
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 45/254 (17%)
Query: 252 NAITVDKSVEFSY-EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNL 310
N+ T + Y E+ +N +G G FG V A +G ++ V +
Sbjct: 17 NSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT---AFGLGKEDAVLKVAV 73
Query: 311 LMQKAAIKKMDMQASREFLAELKVLTHV-HHLNLVRLIGYCVEGS-LFLVYEYIENGNLS 368
M K+ + +A ++ELK+++H+ H N+V L+G C G + ++ EY G+L
Sbjct: 74 KMLKSTAHADEKEA---LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 369 EHLRGSG--------------RDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSA 414
LR RD L +SS+V A+G+ ++ IHRD+ +
Sbjct: 131 NFLRRKAEADLDKEDGRPLELRDLLHFSSQV------AQGMAFLASKNC---IHRDVAAR 181
Query: 415 NILIDKNFHAKVADFGLTK-------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKV 467
N+L+ AK+ DFGL + G+A LP + +M PE + +
Sbjct: 182 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK------WMAPESIFDCVYTVQS 235
Query: 468 DVYAFGVVLYELIS 481
DV+++G++L+E+ S
Sbjct: 236 DVWSYGILLWEIFS 249
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 123/301 (40%), Gaps = 40/301 (13%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICV--NLLMQKAAIKKMDMQASREFLA 330
+ + K+G G FG V E G + + C+ ++L Q A+ +F+
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD--------DFIR 70
Query: 331 ELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRG-SGRDPLPWSSRVQIAL 389
E+ + + H NL+RL G + + +V E G+L + LR G L SR A+
Sbjct: 71 EVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AV 128
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS--LPTRLV 447
A G+ Y+ +IHRD+ + N+L+ K+ DFGL + +
Sbjct: 129 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 185
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS-AKEAIVKGNGSSADSKGLVALFEEV 506
F + PE + S D + FGV L+E+ + +E + NGS L + +E
Sbjct: 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI----LHKIDKEG 241
Query: 507 LNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSS 566
LP P ++CP D M Q C P+ RP+ ++ L+
Sbjct: 242 ERLPRP-------------EDCPQDIYNVMVQ----CWAHKPEDRPTFVALRDFLLEAQP 284
Query: 567 T 567
T
Sbjct: 285 T 285
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 123/301 (40%), Gaps = 40/301 (13%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICV--NLLMQKAAIKKMDMQASREFLA 330
+ + K+G G FG V E G + + C+ ++L Q A+ +F+
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD--------DFIR 60
Query: 331 ELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRG-SGRDPLPWSSRVQIAL 389
E+ + + H NL+RL G + + +V E G+L + LR G L SR A+
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AV 118
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS--LPTRLV 447
A G+ Y+ +IHRD+ + N+L+ K+ DFGL + +
Sbjct: 119 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 175
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS-AKEAIVKGNGSSADSKGLVALFEEV 506
F + PE + S D + FGV L+E+ + +E + NGS L + +E
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI----LHKIDKEG 231
Query: 507 LNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSS 566
LP P ++CP D M Q C P+ RP+ ++ L+
Sbjct: 232 ERLPRP-------------EDCPQDIYNVMVQ----CWAHKPEDRPTFVALRDFLLEAQP 274
Query: 567 T 567
T
Sbjct: 275 T 275
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 45/254 (17%)
Query: 252 NAITVDKSVEFSY-EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNL 310
N+ T + Y E+ +N +G G FG V A +G ++ V +
Sbjct: 25 NSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT---AFGLGKEDAVLKVAV 81
Query: 311 LMQKAAIKKMDMQASREFLAELKVLTHV-HHLNLVRLIGYCVEGS-LFLVYEYIENGNLS 368
M K+ + +A ++ELK+++H+ H N+V L+G C G + ++ EY G+L
Sbjct: 82 KMLKSTAHADEKEA---LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 369 EHLRGSG--------------RDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSA 414
LR RD L +SS+V A+G+ ++ IHRD+ +
Sbjct: 139 NFLRRKAEADLDKEDGRPLELRDLLHFSSQV------AQGMAFLASKNC---IHRDVAAR 189
Query: 415 NILIDKNFHAKVADFGLTK-------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKV 467
N+L+ AK+ DFGL + G+A LP + +M PE + +
Sbjct: 190 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK------WMAPESIFDCVYTVQS 243
Query: 468 DVYAFGVVLYELIS 481
DV+++G++L+E+ S
Sbjct: 244 DVWSYGILLWEIFS 257
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 123/301 (40%), Gaps = 40/301 (13%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICV--NLLMQKAAIKKMDMQASREFLA 330
+ + K+G G FG V E G + + C+ ++L Q A+ +F+
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD--------DFIR 70
Query: 331 ELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRG-SGRDPLPWSSRVQIAL 389
E+ + + H NL+RL G + + +V E G+L + LR G L SR A+
Sbjct: 71 EVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AV 128
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS--LPTRLV 447
A G+ Y+ +IHRD+ + N+L+ K+ DFGL + +
Sbjct: 129 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 185
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS-AKEAIVKGNGSSADSKGLVALFEEV 506
F + PE + S D + FGV L+E+ + +E + NGS L + +E
Sbjct: 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI----LHKIDKEG 241
Query: 507 LNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSS 566
LP P ++CP D M Q C P+ RP+ ++ L+
Sbjct: 242 ERLPRP-------------EDCPQDIYNVMVQ----CWAHKPEDRPTFVALRDFLLEAQP 284
Query: 567 T 567
T
Sbjct: 285 T 285
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 105/236 (44%), Gaps = 59/236 (25%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR--EFLAELKVLTH 337
+GQG FG V A N+ SR AIKK+ + L+E+ +L
Sbjct: 14 LGQGAFGQVVKAR------NALDSRYY---------AIKKIRHTEEKLSTILSEVMLLAS 58
Query: 338 VHHLNLVRLIGYCVE--------------GSLFLVYEYIENGNL-----SEHLRGSGRDP 378
++H +VR +E +LF+ EY ENG L SE+L RD
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL-NQQRDE 117
Query: 379 LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK----- 433
W QI L YIH + IHRD+K NI ID++ + K+ DFGL K
Sbjct: 118 Y-WRLFRQIL----EALSYIHSQGI---IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 434 --LTEVGSASLP------TRLVGTFGYMPPEYAQ-YGDVSPKVDVYAFGVVLYELI 480
+ ++ S +LP T +GT Y+ E G + K+D+Y+ G++ +E+I
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 123/301 (40%), Gaps = 40/301 (13%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICV--NLLMQKAAIKKMDMQASREFLA 330
+ + K+G G FG V E G + + C+ ++L Q A+ +F+
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD--------DFIR 60
Query: 331 ELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRG-SGRDPLPWSSRVQIAL 389
E+ + + H NL+RL G + + +V E G+L + LR G L SR A+
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AV 118
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS--LPTRLV 447
A G+ Y+ +IHRD+ + N+L+ K+ DFGL + +
Sbjct: 119 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS-AKEAIVKGNGSSADSKGLVALFEEV 506
F + PE + S D + FGV L+E+ + +E + NGS L + +E
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI----LHKIDKEG 231
Query: 507 LNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMTLSS 566
LP P ++CP D M Q C P+ RP+ ++ L+
Sbjct: 232 ERLPRP-------------EDCPQDIYNVMVQ----CWAHKPEDRPTFVALRDFLLEAQP 274
Query: 567 T 567
T
Sbjct: 275 T 275
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 270 ATDNFSMSHKIGQGGFGAVY---YAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR 326
A ++ ++ +G+G FG VY Y +GE N + K K +
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKIN-----------VAVKTCKKDCTLDNKE 70
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
+F++E ++ ++ H ++V+LIG E +++ E G L +L ++ L + V
Sbjct: 71 KFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVL 129
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTE---VGSASLP 443
+L + + Y+ +HRDI NIL+ K+ DFGL++ E AS+
Sbjct: 130 YSLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV- 185
Query: 444 TRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALF 503
TRL +M PE + + DV+ F V ++E++S K ++K ++ +
Sbjct: 186 TRL--PIKWMSPESINFRRFTTASDVWMFAVCMWEILS----FGKQPFFWLENKDVIGVL 239
Query: 504 EEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMT 563
E+ LP P D CP VL L C P RP +V +L
Sbjct: 240 EKGDRLPKP-------------DLCP--PVL--YTLMTRCWDYDPSDRPRFTELVCSLSD 282
Query: 564 LSSTTED 570
+ +D
Sbjct: 283 VYQMEKD 289
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 18/241 (7%)
Query: 245 AGTPTSLNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSR 304
+G+P+ N+ + V + + + F +G+G FG V + + R
Sbjct: 122 SGSPSD-NSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKA------TGR 174
Query: 305 LICVNLLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIE 363
+ +L ++ + K ++ + L E +VL + H L L + L V EY
Sbjct: 175 YYAMKILKKEVIVAKDEVAHT---LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 231
Query: 364 NGNLSEHLRGSGRDPLPWSSRVQI-ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNF 422
G L HL R+ + R + + L+Y+H VY RD+K N+++DK+
Sbjct: 232 GGELFFHL---SRERVFSEDRARFYGAEIVSALDYLHSEKNVVY--RDLKLENLMLDKDG 286
Query: 423 HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
H K+ DFGL K A++ T GT Y+ PE + D VD + GVV+YE++
Sbjct: 287 HIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 345
Query: 483 K 483
+
Sbjct: 346 R 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 18/241 (7%)
Query: 245 AGTPTSLNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSR 304
+G+P+ N+ + V + + + F +G+G FG V + + R
Sbjct: 125 SGSPSD-NSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKA------TGR 177
Query: 305 LICVNLLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIE 363
+ +L ++ + K ++ + L E +VL + H L L + L V EY
Sbjct: 178 YYAMKILKKEVIVAKDEVAHT---LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 234
Query: 364 NGNLSEHLRGSGRDPLPWSSRVQI-ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNF 422
G L HL R+ + R + + L+Y+H VY RD+K N+++DK+
Sbjct: 235 GGELFFHL---SRERVFSEDRARFYGAEIVSALDYLHSEKNVVY--RDLKLENLMLDKDG 289
Query: 423 HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
H K+ DFGL K A++ T GT Y+ PE + D VD + GVV+YE++
Sbjct: 290 HIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 348
Query: 483 K 483
+
Sbjct: 349 R 349
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 48/244 (19%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
E+ +N +G G FG V A +G ++ V + M K+ + +A
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEAT---AFGLGKEDAVLKVAVKMLKSTAHADEKEA 95
Query: 325 SREFLAELKVLTHV-HHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRG--------- 373
++ELK+++H+ H N+V L+G C G + ++ EY G+L LR
Sbjct: 96 ---LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP 152
Query: 374 ---------SGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA 424
S RD L +SS+V A+G+ ++ IHRD+ + N+L+ A
Sbjct: 153 AFAIANSTLSTRDLLHFSSQV------AQGMAFLASKNC---IHRDVAARNVLLTNGHVA 203
Query: 425 KVADFGLTK-------LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLY 477
K+ DFGL + G+A LP + +M PE + + DV+++G++L+
Sbjct: 204 KIGDFGLARDIMNDSNYIVKGNARLPVK------WMAPESIFDCVYTVQSDVWSYGILLW 257
Query: 478 ELIS 481
E+ S
Sbjct: 258 EIFS 261
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 270 ATDNFSMSHKIGQGGFGAVY---YAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR 326
A ++ ++ +G+G FG VY Y +GE N + K K +
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKIN-----------VAVKTCKKDCTLDNKE 54
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
+F++E ++ ++ H ++V+LIG E +++ E G L +L ++ L + V
Sbjct: 55 KFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVL 113
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTE---VGSASLP 443
+L + + Y+ +HRDI NIL+ K+ DFGL++ E AS+
Sbjct: 114 YSLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV- 169
Query: 444 TRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALF 503
TRL +M PE + + DV+ F V ++E++S K ++K ++ +
Sbjct: 170 TRL--PIKWMSPESINFRRFTTASDVWMFAVCMWEILS----FGKQPFFWLENKDVIGVL 223
Query: 504 EEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMT 563
E+ LP P D CP VL L C P RP +V +L
Sbjct: 224 EKGDRLPKP-------------DLCP--PVL--YTLMTRCWDYDPSDRPRFTELVCSLSD 266
Query: 564 LSSTTED 570
+ +D
Sbjct: 267 VYQMEKD 273
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 270 ATDNFSMSHKIGQGGFGAVY---YAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR 326
A ++ ++ +G+G FG VY Y +GE N + K K +
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKIN-----------VAVKTCKKDCTLDNKE 58
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
+F++E ++ ++ H ++V+LIG E +++ E G L +L ++ L + V
Sbjct: 59 KFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVL 117
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTE---VGSASLP 443
+L + + Y+ +HRDI NIL+ K+ DFGL++ E AS+
Sbjct: 118 YSLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV- 173
Query: 444 TRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALF 503
TRL +M PE + + DV+ F V ++E++S K ++K ++ +
Sbjct: 174 TRL--PIKWMSPESINFRRFTTASDVWMFAVCMWEILS----FGKQPFFWLENKDVIGVL 227
Query: 504 EEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIVVALMT 563
E+ LP P D CP VL L C P RP +V +L
Sbjct: 228 EKGDRLPKP-------------DLCP--PVL--YTLMTRCWDYDPSDRPRFTELVCSLSD 270
Query: 564 LSSTTED 570
+ +D
Sbjct: 271 VYQMEKD 277
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 118/287 (41%), Gaps = 40/287 (13%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICV--NLLMQKAAIKKMDMQASREFLA 330
+ + K+G G FG V E G + + C+ ++L Q A+ +F+
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD--------DFIR 60
Query: 331 ELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRG-SGRDPLPWSSRVQIAL 389
E+ + + H NL+RL G + + +V E G+L + LR G L SR A+
Sbjct: 61 EVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AV 118
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS--LPTRLV 447
A G+ Y+ +IHRD+ + N+L+ K+ DFGL + +
Sbjct: 119 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS-AKEAIVKGNGSSADSKGLVALFEEV 506
F + PE + S D + FGV L+E+ + +E + NGS L + +E
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI----LHKIDKEG 231
Query: 507 LNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPS 553
LP P ++CP D M Q C P+ RP+
Sbjct: 232 ERLPRP-------------EDCPQDIYNVMVQ----CWAHKPEDRPT 261
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G G FG VY + N + + + +L + + K A++E L E V+ V
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIP--VAIKVLRENTSPK-----ANKEILDEAYVMAGVG 77
Query: 340 HLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLR-GSGR----DPLPWSSRVQIALDSARG 394
+ RL+G C+ ++ LV + + G L +H+R GR D L W ++ A+G
Sbjct: 78 SPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKG 131
Query: 395 LEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMP 454
+ Y+ + + +HRD+ + N+L+ H K+ DFGL +L ++ T G +P
Sbjct: 132 MSYLEDVRL---VHRDLAARNVLVKSPNHVKITDFGLARLLDIDE----TEYHADGGKVP 184
Query: 455 PEYAQYGDV-----SPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNL 509
++ + + + DV+++GV ++EL++ G + +
Sbjct: 185 IKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--------------EI 230
Query: 510 PDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIV 558
PD +E +L P + C +D + M + C + RP R +V
Sbjct: 231 PDLLEKGERLPQPPI---CTIDVYMIMVK----CWMIDSECRPRFRELV 272
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 106/211 (50%), Gaps = 23/211 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D+F ++G G G V+ + G +LI + + K AI+ + + E
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPS-GLVMARKLIHLEI---KPAIRN-------QIIRE 57
Query: 332 LKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
L+VL + +V G + +G + + E+++ G+L + L+ +GR P +V IA+
Sbjct: 58 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV- 116
Query: 391 SARGLEYIHE-HTVPVYIHRDIKSANILIDKNFHAKVADFGLT-KLTEVGSASLPTRLVG 448
+GL Y+ E H + +HRD+K +NIL++ K+ DFG++ +L + + VG
Sbjct: 117 -IKGLTYLREKHKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----EMANEFVG 168
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYEL 479
T YM PE Q S + D+++ G+ L E+
Sbjct: 169 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 199
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 118/287 (41%), Gaps = 40/287 (13%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICV--NLLMQKAAIKKMDMQASREFLA 330
+ + K+G G FG V E G + + C+ ++L Q A+ +F+
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD--------DFIR 64
Query: 331 ELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRG-SGRDPLPWSSRVQIAL 389
E+ + + H NL+RL G + + +V E G+L + LR G L SR A+
Sbjct: 65 EVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AV 122
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS--LPTRLV 447
A G+ Y+ +IHRD+ + N+L+ K+ DFGL + +
Sbjct: 123 QVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS-AKEAIVKGNGSSADSKGLVALFEEV 506
F + PE + S D + FGV L+E+ + +E + NGS L + +E
Sbjct: 180 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI----LHKIDKEG 235
Query: 507 LNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPS 553
LP P ++CP D M Q C P+ RP+
Sbjct: 236 ERLPRP-------------EDCPQDIYNVMVQ----CWAHKPEDRPT 265
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 43/235 (18%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
+F +G+GGFG V+ A+ + + N + R+ N + + + + E+
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKV-----------MREV 54
Query: 333 KVLTHVHHLNLVRLIGYCVEGS-------------LFLVYEYIENGNLSEHLRGSGRDPL 379
K L + H +VR +E + L++ + NL + + +GR +
Sbjct: 55 KALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM--NGRCTI 112
Query: 380 PWSSR---VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL----- 431
R + I L A +E++H + +HRD+K +NI + KV DFGL
Sbjct: 113 EERERSVCLHIFLQIAEAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFGLVTAMD 169
Query: 432 ------TKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
T LT + + + T VGT YM PE S KVD+++ G++L+EL+
Sbjct: 170 QDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 29/228 (12%)
Query: 261 EFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKM 320
EF +K +DN+ + ++G+G F V + G + +++I KK+
Sbjct: 18 EFMMNASTKFSDNYDVKEELGKGAFSVVRRC-VHKTTGLEFAAKII---------NTKKL 67
Query: 321 DMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRG----SG 375
+ ++ E ++ + H N+VRL E S +LV++ + G L E + S
Sbjct: 68 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 127
Query: 376 RDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLT 432
D S +Q L+S + Y H + + +HR++K N+L+ K K+ADFGL
Sbjct: 128 ADA---SHCIQQILES---IAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLA 178
Query: 433 KLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
EV + GT GY+ PE + S VD++A GV+LY L+
Sbjct: 179 --IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 224
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 51/260 (19%)
Query: 252 NAITVDKSVEFSY-EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNL 310
N+ T + Y E+ +N +G G FG V A +G ++ V +
Sbjct: 25 NSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT---AFGLGKEDAVLKVAV 81
Query: 311 LMQKAAIKKMDMQASREFLAELKVLTHV-HHLNLVRLIGYCVEGS-LFLVYEYIENGNLS 368
M K+ + +A ++ELK+++H+ H N+V L+G C G + ++ EY G+L
Sbjct: 82 KMLKSTAHADEKEA---LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 369 EHLRG--------------------SGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIH 408
LR S RD L +SS+V A+G+ ++ IH
Sbjct: 139 NFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQV------AQGMAFLASKNC---IH 189
Query: 409 RDIKSANILIDKNFHAKVADFGLTK-------LTEVGSASLPTRLVGTFGYMPPEYAQYG 461
RD+ + N+L+ AK+ DFGL + G+A LP + +M PE
Sbjct: 190 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK------WMAPESIFDC 243
Query: 462 DVSPKVDVYAFGVVLYELIS 481
+ + DV+++G++L+E+ S
Sbjct: 244 VYTVQSDVWSYGILLWEIFS 263
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 16/225 (7%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
K ++F +G+G F V A SR + +L ++ IK+ +
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR 59
Query: 328 FLAELKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
E V++ + H V+L + + L+ Y +NG L +++R G +
Sbjct: 60 ---ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 116
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTR 445
+ SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ +
Sbjct: 117 AEIVSA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 171
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
VGT Y+ PE D++A G ++Y+L++ GN
Sbjct: 172 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 216
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 16/225 (7%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
K ++F +G+G F V A SR + +L ++ IK+ +
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR 58
Query: 328 FLAELKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
E V++ + H V+L + + L+ Y +NG L +++R G +
Sbjct: 59 ---ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 115
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTR 445
+ SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ +
Sbjct: 116 AEIVSA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 170
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
VGT Y+ PE D++A G ++Y+L++ GN
Sbjct: 171 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 215
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 18/222 (8%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F V A SR + +L ++ IK+ + E
Sbjct: 37 EDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 87
Query: 332 LKVLTHVHHLNLVRLIGYCVEG--SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
V++ + H V+L +C + L+ Y +NG L +++R G + +
Sbjct: 88 RDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 146
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVG 448
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VG
Sbjct: 147 VSA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
T Y+ PE D++A G ++Y+L++ GN
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 243
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 30/248 (12%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+ + K+G+G +G VY A+ R++ + + A + + A RE
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAK-------DSQGRIVALKRIRLDAEDEGIPSTAIRE---- 69
Query: 332 LKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENG---NLSEHLRGSGRDPLPWSSRVQI 387
+ +L +HH N+V LI E L LV+E++E L E+ G S+++I
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQ------DSQIKI 123
Query: 388 AL-DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
L RG+ + H+H + +HRD+K N+LI+ + K+ADFGL + + S +
Sbjct: 124 YLYQLLRGVAHCHQHRI---LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV 180
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEV 506
V + P S VD+++ G + E+I+ K D L +F +
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF----PGVTDDDQLPKIF-SI 235
Query: 507 LNLPDPIE 514
L P+P E
Sbjct: 236 LGTPNPRE 243
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 30/248 (12%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+ + K+G+G +G VY A+ R++ + + A + + A RE
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAK-------DSQGRIVALKRIRLDAEDEGIPSTAIRE---- 69
Query: 332 LKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENG---NLSEHLRGSGRDPLPWSSRVQI 387
+ +L +HH N+V LI E L LV+E++E L E+ G S+++I
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQ------DSQIKI 123
Query: 388 AL-DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
L RG+ + H+H + +HRD+K N+LI+ + K+ADFGL + + S +
Sbjct: 124 YLYQLLRGVAHCHQHRI---LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV 180
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEV 506
V + P S VD+++ G + E+I+ K D L +F +
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF----PGVTDDDQLPKIF-SI 235
Query: 507 LNLPDPIE 514
L P+P E
Sbjct: 236 LGTPNPRE 243
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 16/238 (6%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELK 333
F + +G+GG+G V+ ++R G + ++ + +L + ++ A + AE
Sbjct: 19 FELLRVLGKGGYGKVF--QVRKVTGAN-TGKIFAMKVLKKAMIVRNAKDTAHTK--AERN 73
Query: 334 VLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
+L V H +V LI + G L+L+ EY+ G L L G + + +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEIS 131
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
L ++H+ + I+RD+K NI+++ H K+ DFGL K + ++ GT Y
Sbjct: 132 MALGHLHQKGI---IYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHXFCGTIEY 187
Query: 453 MPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLP 510
M PE + VD ++ G ++Y++++ N K + + + LNLP
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN----RKKTIDKILKCKLNLP 241
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 24/242 (9%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELK 333
F + +G+GG+G V+ ++R G + ++ + +L + ++ A + AE
Sbjct: 19 FELLRVLGKGGYGKVF--QVRKVTGAN-TGKIFAMKVLKKAMIVRNAKDTAHTK--AERN 73
Query: 334 VLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSG----RDPLPWSSRVQIA 388
+L V H +V LI + G L+L+ EY+ G L L G + + + +A
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L ++H+ + I+RD+K NI+++ H K+ DFGL K + ++ G
Sbjct: 134 LG------HLHQKGI---IYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHTFCG 183
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLN 508
T YM PE + VD ++ G ++Y++++ N K + + + LN
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN----RKKTIDKILKCKLN 239
Query: 509 LP 510
LP
Sbjct: 240 LP 241
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 16/225 (7%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
K ++F +G+G F V A SR + +L ++ IK+ +
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR 57
Query: 328 FLAELKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
E V++ + H V+L + + L+ Y +NG L +++R G +
Sbjct: 58 ---ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 114
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTR 445
+ SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ +
Sbjct: 115 AEIVSA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 169
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
VGT Y+ PE D++A G ++Y+L++ GN
Sbjct: 170 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 214
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 41/268 (15%)
Query: 237 TVESTGPAAGTPTSLNAITVDKSVEF----SYEELSKATDNFSMSHKIGQGGFGAVYYAE 292
+ E GP P A K++ S++ D + + IG G +G V A
Sbjct: 16 SAEPPGPVKAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSAR 75
Query: 293 LRGEYGNSYLSRLICVNLLMQKAAIKKMD-----MQASREFLAELKVLTHVHHLNLVRL- 346
R L Q+ AIKK+ + ++ L ELK+L H H N++ +
Sbjct: 76 RR---------------LTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 347 ------IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHE 400
+ Y S+++V + +E+ +L + + S PL RGL+Y+H
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHS 177
Query: 401 HTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS---LPTRLVGTFGYMPPEY 457
V IHRD+K +N+L+++N K+ DFG+ + A T V T Y PE
Sbjct: 178 AQV---IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 234
Query: 458 A-QYGDVSPKVDVYAFGVVLYELISAKE 484
+ + +D+++ G + E+++ ++
Sbjct: 235 MLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 16/225 (7%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
K ++F +G+G F V A SR + +L ++ IK+ +
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR 56
Query: 328 FLAELKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
E V++ + H V+L + + L+ Y +NG L +++R G +
Sbjct: 57 ---ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 113
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTR 445
+ SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ +
Sbjct: 114 AEIVSA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 168
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
VGT Y+ PE D++A G ++Y+L++ GN
Sbjct: 169 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 213
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 16/221 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F V A SR + +L ++ IK+ + E
Sbjct: 32 EDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 82
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
V++ + H V+L + + L+ Y +NG L +++R G + +
Sbjct: 83 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIV 142
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVGT 449
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VGT
Sbjct: 143 SA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
Y+ PE S D++A G ++Y+L++ GN
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 25/217 (11%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D F K+G G FG V+ E R +S L R+I K K + AE
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEER----SSGLERVI-------KTINKDRSQVPMEQIEAE 70
Query: 332 LKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHL---RGSGRDPLPWSSRVQI 387
++VL + H N++++ + ++++V E E G L E + + G+ L ++
Sbjct: 71 IEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGK-ALSEGYVAEL 129
Query: 388 ALDSARGLEYIHEHTVPVYIHRDIKSANILI-DKNFHA--KVADFGLTKLTEVGSASLPT 444
L Y H V +H+D+K NIL D + H+ K+ DFGL +L + S T
Sbjct: 130 MKQMMNALAYFHSQHV---VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS--T 184
Query: 445 RLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
GT YM PE + DV+ K D+++ GVV+Y L++
Sbjct: 185 NAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLT 220
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 46/261 (17%)
Query: 252 NAITVDKSVEFSY-EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNL 310
N+ T + Y E+ +N +G G FG V A +G ++ V +
Sbjct: 10 NSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEAT---AFGLGKEDAVLKVAV 66
Query: 311 LMQKAAIKKMDMQASREFLAELKVLTHV-HHLNLVRLIGYCVEGS-LFLVYEYIENGNLS 368
M K+ + +A ++ELK+++H+ H N+V L+G C G + ++ EY G+L
Sbjct: 67 KMLKSTAHADEKEA---LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 369 EHLR-----------GSGRDP----------LPWSSRVQIALDSARGLEYIHEHTVPVYI 407
LR G+DP L + + A+G+ ++ I
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC---I 180
Query: 408 HRDIKSANILIDKNFHAKVADFGLTK-------LTEVGSASLPTRLVGTFGYMPPEYAQY 460
HRD+ + N+L+ AK+ DFGL + G+A LP + +M PE
Sbjct: 181 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK------WMAPESIFD 234
Query: 461 GDVSPKVDVYAFGVVLYELIS 481
+ + DV+++G++L+E+ S
Sbjct: 235 CVYTVQSDVWSYGILLWEIFS 255
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 31/258 (12%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E+ D+F + IG+G F V +++ + G Y +++ ++++ + +
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMK-QTGQVYAMKIMNKWDMLKRGEVSCFREER 112
Query: 325 SREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSG-RDPLPWS- 382
+ + +T +H + E L+LV EY G+L L G R P +
Sbjct: 113 DVLVNGDRRWITQLH-------FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMAR 165
Query: 383 ---SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGS 439
+ + +A+DS L Y+H RDIK NIL+D+ H ++ADFG
Sbjct: 166 FYLAEIVMAIDSVHRLGYVH---------RDIKPDNILLDRCGHIRLADFGSCLKLRADG 216
Query: 440 ASLPTRLVGTFGYMPPEYAQ-------YGDVSPKVDVYAFGVVLYELISAKEAIVKGNGS 492
VGT Y+ PE Q G P+ D +A GV YE+ + S
Sbjct: 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA--DS 274
Query: 493 SADSKGLVALFEEVLNLP 510
+A++ G + ++E L+LP
Sbjct: 275 TAETYGKIVHYKEHLSLP 292
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 123/291 (42%), Gaps = 51/291 (17%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL---- 329
F+ +IG+G FG VY N + AIK +D++ + + +
Sbjct: 21 FTKLDRIGKGSFGEVYKG---------------IDNHTKEVVAIKIIDLEEAEDEIEDIQ 65
Query: 330 AELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+ VL+ + R G Y L+++ EY+ G+ + L+ PL + I
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPG---PLEETYIATIL 122
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT-KLTEVGSASLPTRLV 447
+ +GL+Y+H IHRDIK+AN+L+ + K+ADFG+ +LT+ V
Sbjct: 123 REILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR--NXFV 177
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
GT +M PE + K D+++ G+ EL KG ++D + LF
Sbjct: 178 GTPFWMAPEVIKQSAYDFKADIWSLGITAIEL-------AKGEPPNSDLHPMRVLFLIPK 230
Query: 508 NLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMRSIV 558
N P +E G + + + C + P+ RP+ + ++
Sbjct: 231 NSPPTLE----------GQHSK-----PFKEFVEACLNKDPRFRPTAKELL 266
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 115/268 (42%), Gaps = 41/268 (15%)
Query: 237 TVESTGPAAGTPTSLNAITVDKSVEF----SYEELSKATDNFSMSHKIGQGGFGAVYYAE 292
+ E GP P A K++ S++ D + + IG G +G V A
Sbjct: 15 SAEPPGPVKAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSAR 74
Query: 293 LRGEYGNSYLSRLICVNLLMQKAAIKKMD-----MQASREFLAELKVLTHVHHLNLVRL- 346
R L Q+ AIKK+ + ++ L ELK+L H H N++ +
Sbjct: 75 RR---------------LTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 119
Query: 347 ------IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHE 400
+ Y S+++V + +E+ +L + + S PL RGL+Y+H
Sbjct: 120 DILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHS 176
Query: 401 HTVPVYIHRDIKSANILIDKNFHAKVADFGLTK---LTEVGSASLPTRLVGTFGYMPPEY 457
V IHRD+K +N+L+++N K+ DFG+ + + T V T Y PE
Sbjct: 177 AQV---IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
Query: 458 A-QYGDVSPKVDVYAFGVVLYELISAKE 484
+ + +D+++ G + E+++ ++
Sbjct: 234 MLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G+G FG V + + R + +L ++ + K ++ + L E +VL +
Sbjct: 18 LGKGTFGKVILVKEKA------TGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQNSR 68
Query: 340 HLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI-ALDSARGLEY 397
H L L + L V EY G L HL R+ + R + + L+Y
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDY 125
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
+H VY RD+K N+++DK+ H K+ DFGL K A++ GT Y+ PE
Sbjct: 126 LHSEKNVVY--RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLAPEV 182
Query: 458 AQYGDVSPKVDVYAFGVVLYELISAK 483
+ D VD + GVV+YE++ +
Sbjct: 183 LEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G+G FG V + + R + +L ++ + K ++ + L E +VL +
Sbjct: 17 LGKGTFGKVILVKEKA------TGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQNSR 67
Query: 340 HLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI-ALDSARGLEY 397
H L L + L V EY G L HL R+ + R + + L+Y
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDY 124
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
+H VY RD+K N+++DK+ H K+ DFGL K A++ GT Y+ PE
Sbjct: 125 LHSEKNVVY--RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLAPEV 181
Query: 458 AQYGDVSPKVDVYAFGVVLYELISAK 483
+ D VD + GVV+YE++ +
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 18/219 (8%)
Query: 268 SKATDN-FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR 326
S+ T N F +G+G FG V + + R + +L ++ + K ++ +
Sbjct: 3 SRVTMNEFEYLKLLGKGTFGKVILVKEKA------TGRYYAMKILKKEVIVAKDEVAHT- 55
Query: 327 EFLAELKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRV 385
L E +VL + H L L + L V EY G L HL R+ + R
Sbjct: 56 --LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL---SRERVFSEDRA 110
Query: 386 QI-ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPT 444
+ + L+Y+H VY RD+K N+++DK+ H K+ DFGL K A++
Sbjct: 111 RFYGAEIVSALDYLHSEKNVVY--RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX 168
Query: 445 RLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
GT Y+ PE + D VD + GVV+YE++ +
Sbjct: 169 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREF-LAE 331
N+ + +G+G FG V A G ++I K + K DMQ E ++
Sbjct: 15 NYQIVKTLGEGSFGKVKLA-YHTTTGQKVALKII------NKKVLAKSDMQGRIEREISY 67
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
L++L H H + L +I + + +V EY N L +++ RD + +
Sbjct: 68 LRLLRHPHIIKLYDVIK--SKDEIIMVIEYAGN-ELFDYI--VQRDKMSEQEARRFFQQI 122
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFG 451
+EY H H + +HRD+K N+L+D++ + K+ADFGL+ + G+ L T G+
Sbjct: 123 ISAVEYCHRHKI---VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF-LKTS-CGSPN 177
Query: 452 YMPPEYAQYGDV--SPKVDVYAFGVVLYELISAK 483
Y PE G + P+VDV++ GV+LY ++ +
Sbjct: 178 YAAPEVIS-GKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREF-LAE 331
N+ + +G+G FG V A G ++I K + K DMQ E ++
Sbjct: 9 NYQIVKTLGEGSFGKVKLA-YHTTTGQKVALKII------NKKVLAKSDMQGRIEREISY 61
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
L++L H H + L +I + + +V EY N L +++ RD + +
Sbjct: 62 LRLLRHPHIIKLYDVIK--SKDEIIMVIEYAGN-ELFDYI--VQRDKMSEQEARRFFQQI 116
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFG 451
+EY H H + +HRD+K N+L+D++ + K+ADFGL+ + G+ L T G+
Sbjct: 117 ISAVEYCHRHKI---VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF-LKTS-CGSPN 171
Query: 452 YMPPEYAQYGDV--SPKVDVYAFGVVLYELISAK 483
Y PE G + P+VDV++ GV+LY ++ +
Sbjct: 172 YAAPEVIS-GKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREF-LAE 331
N+ + +G+G FG V A G ++I K + K DMQ E ++
Sbjct: 5 NYQIVKTLGEGSFGKVKLA-YHTTTGQKVALKII------NKKVLAKSDMQGRIEREISY 57
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
L++L H H + L +I + + +V EY N L +++ RD + +
Sbjct: 58 LRLLRHPHIIKLYDVIK--SKDEIIMVIEYAGN-ELFDYI--VQRDKMSEQEARRFFQQI 112
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFG 451
+EY H H + +HRD+K N+L+D++ + K+ADFGL+ + G+ L T G+
Sbjct: 113 ISAVEYCHRHKI---VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF-LKTS-CGSPN 167
Query: 452 YMPPEYAQYGDV--SPKVDVYAFGVVLYELISAK 483
Y PE G + P+VDV++ GV+LY ++ +
Sbjct: 168 YAAPEVIS-GKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREF-LAE 331
N+ + +G+G FG V A G ++I K + K DMQ E ++
Sbjct: 14 NYQIVKTLGEGSFGKVKLA-YHTTTGQKVALKII------NKKVLAKSDMQGRIEREISY 66
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
L++L H H + L +I + + +V EY N L +++ RD + +
Sbjct: 67 LRLLRHPHIIKLYDVIK--SKDEIIMVIEYAGN-ELFDYI--VQRDKMSEQEARRFFQQI 121
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFG 451
+EY H H + +HRD+K N+L+D++ + K+ADFGL+ + G+ L T G+
Sbjct: 122 ISAVEYCHRHKI---VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF-LKTS-CGSPN 176
Query: 452 YMPPEYAQYGDV--SPKVDVYAFGVVLYELISAK 483
Y PE G + P+VDV++ GV+LY ++ +
Sbjct: 177 YAAPEVIS-GKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 30/224 (13%)
Query: 267 LSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR 326
L +++ + IG+G FG V + ++ + LL + IK+ D S
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKAS------QKVYAMKLLSKFEMIKRSD---SA 120
Query: 327 EFLAELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPW---- 381
F E ++ + +V+L + + L++V EY+ G+L +L + P W
Sbjct: 121 FFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLV-NLMSNYDVPEKWAKFY 179
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFG-LTKLTEVGSA 440
++ V +ALD+ IH + IHRD+K N+L+DK+ H K+ADFG K+ E G
Sbjct: 180 TAEVVLALDA------IHSMGL---IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 230
Query: 441 SLPTRLVGTFGYMPPEY--AQYGD--VSPKVDVYAFGVVLYELI 480
T VGT Y+ PE +Q GD + D ++ GV L+E++
Sbjct: 231 HCDT-AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEML 273
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F V A SR + +L ++ IK+ + E
Sbjct: 32 EDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 82
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
V++ + H V+L + + L+ Y +NG L +++R G + +
Sbjct: 83 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVGT 449
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VGT
Sbjct: 143 SA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
Y+ PE D++A G ++Y+L++ GN
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F V A SR + +L ++ IK+ + E
Sbjct: 30 EDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 80
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
V++ + H V+L + + L+ Y +NG L +++R G + +
Sbjct: 81 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVGT 449
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VGT
Sbjct: 141 SA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
Y+ PE D++A G ++Y+L++ GN
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F V A SR + +L ++ IK+ + E
Sbjct: 32 EDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 82
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
V++ + H V+L + + L+ Y +NG L +++R G + +
Sbjct: 83 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVGT 449
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VGT
Sbjct: 143 SA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
Y+ PE D++A G ++Y+L++ GN
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 104/236 (44%), Gaps = 59/236 (25%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR--EFLAELKVLTH 337
+GQG FG V A N+ SR AIKK+ + L+E+ +L
Sbjct: 14 LGQGAFGQVVKAR------NALDSRYY---------AIKKIRHTEEKLSTILSEVMLLAS 58
Query: 338 VHHLNLVRLIGYCVE--------------GSLFLVYEYIENGNL-----SEHLRGSGRDP 378
++H +VR +E +LF+ EY EN L SE+L RD
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENL-NQQRDE 117
Query: 379 LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK----- 433
W QI L YIH + IHRD+K NI ID++ + K+ DFGL K
Sbjct: 118 Y-WRLFRQIL----EALSYIHSQGI---IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 434 --LTEVGSASLP------TRLVGTFGYMPPEYAQ-YGDVSPKVDVYAFGVVLYELI 480
+ ++ S +LP T +GT Y+ E G + K+D+Y+ G++ +E+I
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 30/225 (13%)
Query: 266 ELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS 325
+L +++ + IG+G FG V + ++ + LL + IK+ D S
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKS------TRKVYAMKLLSKFEMIKRSD---S 113
Query: 326 REFLAELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPW--- 381
F E ++ + +V+L + + L++V EY+ G+L +L + P W
Sbjct: 114 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARF 172
Query: 382 -SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFG-LTKLTEVGS 439
++ V +ALD+ IH +IHRD+K N+L+DK+ H K+ADFG K+ + G
Sbjct: 173 YTAEVVLALDA------IHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223
Query: 440 ASLPTRLVGTFGYMPPEY--AQYGD--VSPKVDVYAFGVVLYELI 480
T VGT Y+ PE +Q GD + D ++ GV LYE++
Sbjct: 224 VRCDT-AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 24/201 (11%)
Query: 295 GEYGNSYLSRLICVNLLMQKAAIKKMDM--QASREFLAELKVLT-HVHHLNLVRLIGYCV 351
G YG Y R + L AAIK MD+ E E+ +L + HH N+ G +
Sbjct: 35 GTYGQVYKGRHVKTGQL---AAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 352 -------EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVP 404
+ L+LV E+ G++++ ++ + + L I + RGL ++H+H V
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKV- 150
Query: 405 VYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVS 464
IHRDIK N+L+ +N K+ DFG++ + T +GT +M PE D +
Sbjct: 151 --IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT-FIGTPYWMAPEVIAC-DEN 206
Query: 465 P------KVDVYAFGVVLYEL 479
P K D+++ G+ E+
Sbjct: 207 PDATYDFKSDLWSLGITAIEM 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F V A SR + +L ++ IK+ + E
Sbjct: 33 EDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 83
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
V++ + H V+L + + L+ Y +NG L +++R G + +
Sbjct: 84 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 143
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVGT 449
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VGT
Sbjct: 144 SA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
Y+ PE D++A G ++Y+L++ GN
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F V A SR + +L ++ IK+ + E
Sbjct: 32 EDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 82
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
V++ + H V+L + + L+ Y +NG L +++R G + +
Sbjct: 83 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVGT 449
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VGT
Sbjct: 143 SA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
Y+ PE D++A G ++Y+L++ GN
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F V A SR + +L ++ IK+ + E
Sbjct: 35 EDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 85
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
V++ + H V+L + + L+ Y +NG L +++R G + +
Sbjct: 86 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 145
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVGT 449
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VGT
Sbjct: 146 SA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
Y+ PE D++A G ++Y+L++ GN
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 241
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F V A SR + +L ++ IK+ + E
Sbjct: 33 EDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 83
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
V++ + H V+L + + L+ Y +NG L +++R G + +
Sbjct: 84 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 143
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVGT 449
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VGT
Sbjct: 144 SA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
Y+ PE D++A G ++Y+L++ GN
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 48
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 109 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 30/211 (14%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM--QASREFL-AELKVL 335
KIG+G G V A R ++ ++ A+K MD+ Q RE L E+ ++
Sbjct: 52 KIGEGSTGIVCLA--REKHSG-------------RQVAVKMMDLRKQQRRELLFNEVVIM 96
Query: 336 THVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARG 394
H N+V + Y V L+++ E+++ G L++ + + ++ + L +
Sbjct: 97 RDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVL---QA 153
Query: 395 LEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR--LVGTFGY 452
L Y+H V IHRDIKS +IL+ + K++DFG S +P R LVGT +
Sbjct: 154 LAYLHAQGV---IHRDIKSDSILLTLDGRVKLSDFGFCAQI---SKDVPKRKXLVGTPYW 207
Query: 453 MPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
M PE + +VD+++ G+++ E++ +
Sbjct: 208 MAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F V A SR + +L ++ IK+ + E
Sbjct: 32 EDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 82
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
V++ + H V+L + + L+ Y +NG L +++R G + +
Sbjct: 83 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVGT 449
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VGT
Sbjct: 143 SA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
Y+ PE D++A G ++Y+L++ GN
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F V A SR + +L ++ IK+ + E
Sbjct: 30 EDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 80
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
V++ + H V+L + + L+ Y +NG L +++R G + +
Sbjct: 81 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVGT 449
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VGT
Sbjct: 141 SA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
Y+ PE D++A G ++Y+L++ GN
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F V A SR + +L ++ IK+ + E
Sbjct: 32 EDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 82
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
V++ + H V+L + + L+ Y +NG L +++R G + +
Sbjct: 83 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVGT 449
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VGT
Sbjct: 143 SA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
Y+ PE D++A G ++Y+L++ GN
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 29/221 (13%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+K +DN+ + ++G+G F V + G + +++I KK+ + ++
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRC-VHKTTGLEFAAKII---------NTKKLSARDFQK 50
Query: 328 FLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRG----SGRDPLPWS 382
E ++ + H N+VRL E S +LV++ + G L E + S D S
Sbjct: 51 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA---S 107
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGS 439
+Q L+S + Y H + + +HR++K N+L+ K K+ADFGL EV
Sbjct: 108 HCIQQILES---IAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVND 159
Query: 440 ASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
+ GT GY+ PE + S VD++A GV+LY L+
Sbjct: 160 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 200
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 30/225 (13%)
Query: 266 ELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS 325
+L +++ + IG+G FG V + ++ + LL + IK+ D S
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKS------TRKVYAMKLLSKFEMIKRSD---S 118
Query: 326 REFLAELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPW--- 381
F E ++ + +V+L + + L++V EY+ G+L +L + P W
Sbjct: 119 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARF 177
Query: 382 -SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFG-LTKLTEVGS 439
++ V +ALD+ IH +IHRD+K N+L+DK+ H K+ADFG K+ + G
Sbjct: 178 YTAEVVLALDA------IHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 228
Query: 440 ASLPTRLVGTFGYMPPEY--AQYGD--VSPKVDVYAFGVVLYELI 480
T VGT Y+ PE +Q GD + D ++ GV LYE++
Sbjct: 229 VRCDT-AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 112/281 (39%), Gaps = 83/281 (29%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-----HSEHRALMSE 82
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSR---- 384
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+ ++
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARF 142
Query: 385 -------VQIALDSARGLEY--------------------IHEHTVPVYIHRD------- 410
I +D R L+ + E P +++D
Sbjct: 143 RQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHL 202
Query: 411 -----------------------IKSANILIDKNFHAKVADFGLTK-------LTEVGSA 440
+ + NIL+ + K+ DFGL + G A
Sbjct: 203 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 441 SLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 263 RLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 29/221 (13%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+K +DN+ + ++G+G F V + G + +++I KK+ + ++
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRC-VHKTTGLEFAAKII---------NTKKLSARDFQK 51
Query: 328 FLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRG----SGRDPLPWS 382
E ++ + H N+VRL E S +LV++ + G L E + S D S
Sbjct: 52 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA---S 108
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGS 439
+Q L+S + Y H + + +HR++K N+L+ K K+ADFGL EV
Sbjct: 109 HCIQQILES---IAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVND 160
Query: 440 ASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
+ GT GY+ PE + S VD++A GV+LY L+
Sbjct: 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 201
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 48
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 109 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 112/281 (39%), Gaps = 83/281 (29%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-----HSEHRALMSE 80
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSR---- 384
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+ ++
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARF 140
Query: 385 -------VQIALDSARGLEY--------------------IHEHTVPVYIHRD------- 410
I +D R L+ + E P +++D
Sbjct: 141 RQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHL 200
Query: 411 -----------------------IKSANILIDKNFHAKVADFGLTK-------LTEVGSA 440
+ + NIL+ + K+ DFGL + G A
Sbjct: 201 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 441 SLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 261 RLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 30/225 (13%)
Query: 266 ELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS 325
+L +++ + IG+G FG V + ++ + LL + IK+ D S
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKS------TRKVYAMKLLSKFEMIKRSD---S 118
Query: 326 REFLAELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPW--- 381
F E ++ + +V+L + + L++V EY+ G+L +L + P W
Sbjct: 119 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARF 177
Query: 382 -SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFG-LTKLTEVGS 439
++ V +ALD+ IH +IHRD+K N+L+DK+ H K+ADFG K+ + G
Sbjct: 178 YTAEVVLALDA------IHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 228
Query: 440 ASLPTRLVGTFGYMPPEY--AQYGD--VSPKVDVYAFGVVLYELI 480
T VGT Y+ PE +Q GD + D ++ GV LYE++
Sbjct: 229 VRCDT-AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 27/211 (12%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
K+G+G + VY G S L+ NL+ K + + A + E+ +L +
Sbjct: 9 KLGEGTYATVYK-------GKSKLTD----NLVALKEIRLEHEEGAPCTAIREVSLLKDL 57
Query: 339 HHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N+V L E SL LV+EY++ +L ++L G + + + RGL Y
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCG-NIINMHNVKLFLFQLLRGLAY 115
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL----VGTFGYM 453
H V +HRD+K N+LI++ K+ADFGL + + S+PT+ V T Y
Sbjct: 116 CHRQKV---LHRDLKPQNLLINERGELKLADFGLAR-----AKSIPTKTYDNEVVTLWYR 167
Query: 454 PPE-YAQYGDVSPKVDVYAFGVVLYELISAK 483
PP+ D S ++D++ G + YE+ + +
Sbjct: 168 PPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 29/221 (13%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
+K +DN+ + ++G+G F V + G + +++I KK+ + ++
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRC-VHKTTGLEFAAKII---------NTKKLSARDFQK 51
Query: 328 FLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRG----SGRDPLPWS 382
E ++ + H N+VRL E S +LV++ + G L E + S D S
Sbjct: 52 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA---S 108
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGS 439
+Q L+S + Y H + + +HR++K N+L+ K K+ADFGL EV
Sbjct: 109 HCIQQILES---IAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVND 160
Query: 440 ASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
+ GT GY+ PE + S VD++A GV+LY L+
Sbjct: 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 201
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F V A SR + +L ++ IK+ + E
Sbjct: 30 EDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 80
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
V++ + H V+L + + L+ Y +NG L +++R G + +
Sbjct: 81 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVGT 449
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VGT
Sbjct: 141 SA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
Y+ PE D++A G ++Y+L++ GN
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 109/287 (37%), Gaps = 90/287 (31%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
A + + +G+G FG V A G S R + V +L + A + + +
Sbjct: 25 ARERLKLGKSLGRGAFGKVVQASAFG-IKKSPTCRTVAVKMLKEGATASEY-----KALM 78
Query: 330 AELKVLTHV-HHLNLVRLIG--------------YCVEGSL------------------- 355
ELK+LTH+ HHLN+V L+G YC G+L
Sbjct: 79 TELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAAL 138
Query: 356 -----------------------------FLVYEYIENGNLS-----EHLRGSGRDPLPW 381
F + E+ +LS E G ++P+
Sbjct: 139 HMEPKKEKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITM 198
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-------L 434
+ + ARG+E++ IHRD+ + NIL+ +N K+ DFGL +
Sbjct: 199 EDLISYSFQVARGMEFLSSRKC---IHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
Query: 435 TEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
G LP + +M PE S K DV+++GV+L+E+ S
Sbjct: 256 VRKGDTRLPLK------WMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 112/281 (39%), Gaps = 83/281 (29%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 22 DRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-----HSEHRALMSE 75
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSR---- 384
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+ ++
Sbjct: 76 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARF 135
Query: 385 -------VQIALDSARGLEY--------------------IHEHTVPVYIHRD------- 410
I +D R L+ + E P +++D
Sbjct: 136 RQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHL 195
Query: 411 -----------------------IKSANILIDKNFHAKVADFGLTK-------LTEVGSA 440
+ + NIL+ + K+ DFGL + G A
Sbjct: 196 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 441 SLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 256 RLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 274 FSMSHKIGQGGFGAVYYA---ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+ + +G+G FG V A + + + ++SR L++K+ M M+ RE ++
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQ-----LLKKS---DMHMRVERE-IS 61
Query: 331 ELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
LK+L H H + L +I + +V EY G L +++ R R +
Sbjct: 62 YLKLLRHPHIIKLYDVI--TTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQII 118
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF 450
A +EY H H + +HRD+K N+L+D N + K+ADFGL+ + G+ L T G+
Sbjct: 119 CA--IEYCHRHKI---VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF-LKTS-CGSP 171
Query: 451 GYMPPEYAQYGDV--SPKVDVYAFGVVLYELISAK 483
Y PE G + P+VDV++ G+VLY ++ +
Sbjct: 172 NYAAPEVIN-GKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 112/281 (39%), Gaps = 83/281 (29%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + +G+G FG V A+ G + R + V +L + A R ++E
Sbjct: 20 DRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-----HSEHRALMSE 73
Query: 332 LKVLTHV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSR---- 384
LK+L H+ HHLN+V L+G C + G L ++ E+ + GNLS +LR + +P+ ++
Sbjct: 74 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARF 133
Query: 385 -------VQIALDSARGLEY--------------------IHEHTVPVYIHRD------- 410
I +D R L+ + E P +++D
Sbjct: 134 RQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHL 193
Query: 411 -----------------------IKSANILIDKNFHAKVADFGLTK-------LTEVGSA 440
+ + NIL+ + K+ DFGL + G A
Sbjct: 194 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 441 SLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
LP + +M PE + + DV++FGV+L+E+ S
Sbjct: 254 RLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 49
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 110 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 49
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 110 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 49
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 50 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 110 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 165 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 49
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 110 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 49
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 110 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE---F 328
D + + ++G G FG VY A+ N S L AA K +D ++ E +
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQ------NKETSVL---------AAAKVIDTKSEEELEDY 81
Query: 329 LAELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI 387
+ E+ +L H N+V+L+ + E +L+++ E+ G + + R PL S +
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-PLTESQIQVV 140
Query: 388 ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLV 447
+ L Y+H++ + IHRD+K+ NIL + K+ADFG++ + +
Sbjct: 141 CKQTLDALNYLHDNKI---IHRDLKAGNILFTLDGDIKLADFGVSA-KNTRTIQRRDSFI 196
Query: 448 GTFGYMPPE--YAQYGDVSP---KVDVYAFGVVLYEL 479
GT +M PE + P K DV++ G+ L E+
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 48
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 109 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 48
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 109 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 47
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 48 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 107
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 108 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 162
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F V A SR + +L ++ IK+ + E
Sbjct: 14 EDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 64
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
V++ + H V+L + + L+ Y +NG L +++R G + +
Sbjct: 65 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 124
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVGT 449
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VGT
Sbjct: 125 SA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
Y+ PE D++A G ++Y+L++ GN
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 220
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 49
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 50 ENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 110 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 29/230 (12%)
Query: 256 VDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA 315
VD E Y + + F+ KIG+G FG V+ N +
Sbjct: 11 VDLGTENLYFQSMDPEELFTKLEKIGKGSFGEVFKG---------------IDNRTQKVV 55
Query: 316 AIKKMDMQASREFLA----ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEH 370
AIK +D++ + + + E+ VL+ + + G Y + L+++ EY+ G+ +
Sbjct: 56 AIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDL 115
Query: 371 LRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFG 430
L PL + I + +GL+Y+H IHRDIK+AN+L+ ++ K+ADFG
Sbjct: 116 LEPG---PLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFG 169
Query: 431 LT-KLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYEL 479
+ +LT+ VGT +M PE + K D+++ G+ EL
Sbjct: 170 VAGQLTDTQIKR--NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 217
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 15/170 (8%)
Query: 323 QASREFL-AELKVLTHVHHLNLVRLIGYCVE---GSLFLVYEYIENGNLSEHL-RGSG-R 376
+A ++ L +E+ +L + H N+VR ++ +L++V EY E G+L+ + +G+ R
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 377 DPLPWSSRVQIALDSARGLEYIHE-----HTVPVYIHRDIKSANILIDKNFHAKVADFGL 431
L +++ L+ H HTV +HRD+K AN+ +D + K+ DFGL
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTV---LHRDLKPANVFLDGKQNVKLGDFGL 162
Query: 432 TKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
++ S VGT YM PE + K D+++ G +LYEL +
Sbjct: 163 ARILN-HDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 49
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 110 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 48
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 109 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F V A SR + +L ++ IK+ + E
Sbjct: 29 EDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 79
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
V++ + H V+L + + L+ Y +NG L +++R G + +
Sbjct: 80 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 139
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVGT 449
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VGT
Sbjct: 140 SA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
Y+ PE D++A G ++Y+L++ GN
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 49
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 110 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 48
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 109 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 48
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 109 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
+FL E + H ++V+LIG E ++++ E G L L+ + L +S +
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR-KFSLDLASLIL 115
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
A + L Y+ ++HRDI + N+L+ N K+ DFGL++ E + ++
Sbjct: 116 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG 172
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
+M PE + + DV+ FGV ++E++
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 48
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 109 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 16/221 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F V A SR + +L ++ IK+ + E
Sbjct: 29 EDFKFGKILGEGSFSTVVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 79
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
V++ + H V+L + + L+ Y +NG L +++R G + +
Sbjct: 80 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 139
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVGT 449
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VGT
Sbjct: 140 SA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
Y+ PE D++A G ++Y+L++ GN
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 15/170 (8%)
Query: 323 QASREFL-AELKVLTHVHHLNLVRLIGYCVE---GSLFLVYEYIENGNLSEHL-RGSG-R 376
+A ++ L +E+ +L + H N+VR ++ +L++V EY E G+L+ + +G+ R
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 377 DPLPWSSRVQIALDSARGLEYIHE-----HTVPVYIHRDIKSANILIDKNFHAKVADFGL 431
L +++ L+ H HTV +HRD+K AN+ +D + K+ DFGL
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTV---LHRDLKPANVFLDGKQNVKLGDFGL 162
Query: 432 TKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
++ S VGT YM PE + K D+++ G +LYEL +
Sbjct: 163 ARILN-HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 130/313 (41%), Gaps = 62/313 (19%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+ S +G G FG V A G S + + V +L A + + + ++E
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLI-KSDAAMTVAVKMLKPSAHLTERE-----ALMSE 76
Query: 332 LKVLTHV-HHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS------ 383
LKVL+++ +H+N+V L+G C + G ++ EY G+L LR RD S
Sbjct: 77 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIM 135
Query: 384 -----------RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT 432
+ + A+G+ ++ IHRD+ + NIL+ K+ DFGL
Sbjct: 136 EDDELALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLA 192
Query: 433 KLTE-------VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEA 485
+ + G+A LP + +M PE + + DV+++G+ L+EL S +
Sbjct: 193 RDIKNDSNYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 246
Query: 486 IVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQ 545
G DSK F +++ E R L P + +M + K C
Sbjct: 247 PYP--GMPVDSK-----FYKMIK-----EGFRML--------SPEHAPAEMYDIMKTCWD 286
Query: 546 EYPQLRPSMRSIV 558
P RP+ + IV
Sbjct: 287 ADPLKRPTFKQIV 299
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 48
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 109 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 116/245 (47%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY +G + I V ++ + A +A++E L E
Sbjct: 50 EFKKIKVLGSGAFGTVY----KGLWIPEGEKVKIPVAIMELREATSP---KANKEILDEA 102
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 103 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 161
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 162 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 214
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 215 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 270
Query: 508 NLPDP 512
LP P
Sbjct: 271 RLPQP 275
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 264 YEELSKATDNFSMSHKIGQ-GGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDM 322
YE +++ + IG+ G FG VY A+ N S L AA K +D
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQ------NKETSVL---------AAAKVIDT 45
Query: 323 QASRE---FLAELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDP 378
++ E ++ E+ +L H N+V+L+ + E +L+++ E+ G + + R P
Sbjct: 46 KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-P 104
Query: 379 LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVG 438
L S + + L Y+H++ + IHRD+K+ NIL + K+ADFG++
Sbjct: 105 LTESQIQVVCKQTLDALNYLHDNKI---IHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 161
Query: 439 SASLPTRLVGTFGYMPPE--YAQYGDVSP---KVDVYAFGVVLYEL 479
+GT +M PE + P K DV++ G+ L E+
Sbjct: 162 XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 48
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 109 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G +G V A VN + ++A A+K +DM+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 48
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 109 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 263 SYEELSK---ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKK 319
YE +++ D + + ++G G FG VY A+ N S L AA K
Sbjct: 25 QYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQ------NKETSVL---------AAAKV 69
Query: 320 MDMQASRE---FLAELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSG 375
+D ++ E ++ E+ +L H N+V+L+ + E +L+++ E+ G + +
Sbjct: 70 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE 129
Query: 376 RDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLT 435
R PL S + + L Y+H++ + IHRD+K+ NIL + K+ADFG++
Sbjct: 130 R-PLTESQIQVVCKQTLDALNYLHDNKI---IHRDLKAGNILFTLDGDIKLADFGVSA-K 184
Query: 436 EVGSASLPTRLVGTFGYMPPE--YAQYGDVSP---KVDVYAFGVVLYEL 479
+GT +M PE + P K DV++ G+ L E+
Sbjct: 185 NTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 26/232 (11%)
Query: 278 HKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTH 337
KIG+G +G V+ A+ R + L R+ + D L E+ +L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRV----------RLDDDDEGVPSSALREICLLKE 57
Query: 338 VHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLE 396
+ H N+VRL + L LV+E+ + +L ++ D P + +GL
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVK-SFLFQLLKGLG 115
Query: 397 YIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL----VGTFGY 452
+ H V +HRD+K N+LI++N K+ADFGL + + +P R V T Y
Sbjct: 116 FCHSRNV---LHRDLKPQNLLINRNGELKLADFGLAR-----AFGIPVRCYSAEVVTLWY 167
Query: 453 MPPEYAQYGDV-SPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALF 503
PP+ + S +D+++ G + EL +A + GN K + L
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLL 219
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 130/313 (41%), Gaps = 62/313 (19%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+ S +G G FG V A G S + + V +L A + + + ++E
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLI-KSDAAMTVAVKMLKPSAHLTERE-----ALMSE 99
Query: 332 LKVLTHV-HHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS------ 383
LKVL+++ +H+N+V L+G C + G ++ EY G+L LR RD S
Sbjct: 100 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIM 158
Query: 384 -----------RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT 432
+ + A+G+ ++ IHRD+ + NIL+ K+ DFGL
Sbjct: 159 EDDELALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLA 215
Query: 433 KLTE-------VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEA 485
+ + G+A LP + +M PE + + DV+++G+ L+EL S +
Sbjct: 216 RHIKNDSNYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 269
Query: 486 IVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQ 545
G DSK F +++ E R L P + +M + K C
Sbjct: 270 PYP--GMPVDSK-----FYKMIK-----EGFRML--------SPEHAPAEMYDIMKTCWD 309
Query: 546 EYPQLRPSMRSIV 558
P RP+ + IV
Sbjct: 310 ADPLKRPTFKQIV 322
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE---F 328
D + + ++G G FG VY A+ N S L AA K +D ++ E +
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQ------NKETSVL---------AAAKVIDTKSEEELEDY 81
Query: 329 LAELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI 387
+ E+ +L H N+V+L+ + E +L+++ E+ G + + R PL S +
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-PLTESQIQVV 140
Query: 388 ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLV 447
+ L Y+H++ + IHRD+K+ NIL + K+ADFG++ +
Sbjct: 141 CKQTLDALNYLHDNKI---IHRDLKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRDSFI 196
Query: 448 GTFGYMPPE--YAQYGDVSP---KVDVYAFGVVLYEL 479
GT +M PE + P K DV++ G+ L E+
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 38/253 (15%)
Query: 264 YEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
+++ D + +G G F V AE + +L+ + + +KA K +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAE------DKRTQKLVAIKCIAKKALEGK---E 60
Query: 324 ASREFLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSG----RDP 378
S E E+ VL + H N+V L Y G L+L+ + + G L + + G RD
Sbjct: 61 GSME--NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD- 117
Query: 379 LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANIL---IDKNFHAKVADFGLTKLT 435
+SR+ + A ++Y+H+ + +HRD+K N+L +D++ ++DFGL+K+
Sbjct: 118 ---ASRLIFQVLDA--VKYLHDLGI---VHRDLKPENLLYYSLDEDSKIMISDFGLSKME 169
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
+ GS + + GT GY+ PE S VD ++ GV+ Y L+ N D
Sbjct: 170 DPGS--VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN----D 223
Query: 496 SKGLVALFEEVLN 508
+K LFE++L
Sbjct: 224 AK----LFEQILK 232
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 16/221 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++F +G+G F A SR + +L ++ IK+ + E
Sbjct: 30 EDFKFGKILGEGSFSTTVLAR------ELATSREYAIKILEKRHIIKENKVPYVTR---E 80
Query: 332 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
V++ + H V+L + + L+ Y +NG L +++R G + +
Sbjct: 81 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK-LTEVGSASLPTRLVGT 449
SA LEY+H + IHRD+K NIL++++ H ++ DFG K L+ + VGT
Sbjct: 141 SA--LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 450 FGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
Y+ PE D++A G ++Y+L++ GN
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 132/307 (42%), Gaps = 45/307 (14%)
Query: 270 ATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL 329
++ F K+G G + VY L++ V + +++ + + S +
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKG----------LNKTTGVYVALKEVKLDSEEGTPSTA-I 51
Query: 330 AELKVLTHVHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHL--RGSGRDP--LPWSSR 384
E+ ++ + H N+VRL E L LV+E+++N +L +++ R G P L +
Sbjct: 52 REISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLV 110
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPT 444
+GL + HE+ + +HRD+K N+LI+K K+ DFGL + + + +
Sbjct: 111 KYFQWQLLQGLAFCHENKI---LHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS 167
Query: 445 RLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLV---- 500
+V + P S +D+++ G +L E+I+ K + G K +
Sbjct: 168 EVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK-PLFPGTNDEEQLKLIFDIMG 226
Query: 501 ----ALFEEVLNLPD--------PIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYP 548
+L+ V LP P DLR+++ P + PLD L M L +
Sbjct: 227 TPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKE--PLDGNL-MDFLHGLL----- 278
Query: 549 QLRPSMR 555
QL P MR
Sbjct: 279 QLNPDMR 285
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 130/313 (41%), Gaps = 62/313 (19%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+ S +G G FG V A G S + + V +L A + + + ++E
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLI-KSDAAMTVAVKMLKPSAHLTERE-----ALMSE 92
Query: 332 LKVLTHV-HHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS------ 383
LKVL+++ +H+N+V L+G C + G ++ EY G+L LR RD S
Sbjct: 93 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIM 151
Query: 384 -----------RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT 432
+ + A+G+ ++ IHRD+ + NIL+ K+ DFGL
Sbjct: 152 EDDELALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLA 208
Query: 433 KLTE-------VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEA 485
+ + G+A LP + +M PE + + DV+++G+ L+EL S +
Sbjct: 209 RDIKNDSNYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 262
Query: 486 IVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQ 545
G DSK F +++ E R L P + +M + K C
Sbjct: 263 PYP--GMPVDSK-----FYKMIK-----EGFRML--------SPEHAPAEMYDIMKTCWD 302
Query: 546 EYPQLRPSMRSIV 558
P RP+ + IV
Sbjct: 303 ADPLKRPTFKQIV 315
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 130/313 (41%), Gaps = 62/313 (19%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+ S +G G FG V A G S + + V +L A + + + ++E
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLI-KSDAAMTVAVKMLKPSAHLTERE-----ALMSE 99
Query: 332 LKVLTHV-HHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS------ 383
LKVL+++ +H+N+V L+G C + G ++ EY G+L LR RD S
Sbjct: 100 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIM 158
Query: 384 -----------RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT 432
+ + A+G+ ++ IHRD+ + NIL+ K+ DFGL
Sbjct: 159 EDDELALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLA 215
Query: 433 KLTE-------VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEA 485
+ + G+A LP + +M PE + + DV+++G+ L+EL S +
Sbjct: 216 RDIKNDSNYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 269
Query: 486 IVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQ 545
G DSK F +++ E R L P + +M + K C
Sbjct: 270 PYP--GMPVDSK-----FYKMIK-----EGFRML--------SPEHAPAEMYDIMKTCWD 309
Query: 546 EYPQLRPSMRSIV 558
P RP+ + IV
Sbjct: 310 ADPLKRPTFKQIV 322
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
++ TD++ + ++G+G F V ++ Y +++I KK+ + ++
Sbjct: 27 TRFTDDYQLFEELGKGAFSVVRRC-VKKTPTQEYAAKII---------NTKKLSARDHQK 76
Query: 328 FLAELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
E ++ + H N+VRL EG +LV++ + G L E + R+ +
Sbjct: 77 LEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI--VAREYYSEADASH 134
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGSASLP 443
+ +IH+H + +HRD+K N+L+ K K+ADFGL + G
Sbjct: 135 CIHQILESVNHIHQHDI---VHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAW 190
Query: 444 TRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
GT GY+ PE + VD++A GV+LY L+
Sbjct: 191 FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILL 227
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 29/212 (13%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL---- 329
F+ KIG+G FG V+ N + AIK +D++ + + +
Sbjct: 24 FTKLEKIGKGSFGEVFKG---------------IDNRTQKVVAIKIIDLEEAEDEIEDIQ 68
Query: 330 AELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+ VL+ + + G Y + L+++ EY+ G+ + L PL + I
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATIL 125
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT-KLTEVGSASLPTRLV 447
+ +GL+Y+H IHRDIK+AN+L+ ++ K+ADFG+ +LT+ V
Sbjct: 126 REILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFV 180
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYEL 479
GT +M PE + K D+++ G+ EL
Sbjct: 181 GTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 212
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 130/313 (41%), Gaps = 62/313 (19%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+ S +G G FG V A G S + + V +L A + + + ++E
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLI-KSDAAMTVAVKMLKPSAHLTERE-----ALMSE 94
Query: 332 LKVLTHV-HHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSS------ 383
LKVL+++ +H+N+V L+G C + G ++ EY G+L LR RD S
Sbjct: 95 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIM 153
Query: 384 -----------RVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT 432
+ + A+G+ ++ IHRD+ + NIL+ K+ DFGL
Sbjct: 154 EDDELALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLA 210
Query: 433 KLTE-------VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEA 485
+ + G+A LP + +M PE + + DV+++G+ L+EL S +
Sbjct: 211 RDIKNDSNYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 264
Query: 486 IVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQ 545
G DSK F +++ E R L P + +M + K C
Sbjct: 265 PYP--GMPVDSK-----FYKMIK-----EGFRML--------SPEHAPAEMYDIMKTCWD 304
Query: 546 EYPQLRPSMRSIV 558
P RP+ + IV
Sbjct: 305 ADPLKRPTFKQIV 317
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 29/212 (13%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL---- 329
F+ KIG+G FG V+ N + AIK +D++ + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKG---------------IDNRTQKVVAIKIIDLEEAEDEIEDIQ 53
Query: 330 AELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+ VL+ + + G Y + L+++ EY+ G+ + L PL + I
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATIL 110
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT-KLTEVGSASLPTRLV 447
+ +GL+Y+H IHRDIK+AN+L+ ++ K+ADFG+ +LT+ V
Sbjct: 111 REILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFV 165
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYEL 479
GT +M PE + K D+++ G+ EL
Sbjct: 166 GTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 197
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 69
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVR-EHKDNIGSQYLLNWCVQIA 128
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 129 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 181
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 237
Query: 508 NLPDP 512
LP P
Sbjct: 238 RLPQP 242
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 29/212 (13%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFL---- 329
F+ KIG+G FG V+ N + AIK +D++ + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKG---------------IDNRTQKVVAIKIIDLEEAEDEIEDIQ 53
Query: 330 AELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIA 388
E+ VL+ + + G Y + L+++ EY+ G+ + L PL + I
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATIL 110
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLT-KLTEVGSASLPTRLV 447
+ +GL+Y+H IHRDIK+AN+L+ ++ K+ADFG+ +LT+ V
Sbjct: 111 REILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NTFV 165
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYEL 479
GT +M PE + K D+++ G+ EL
Sbjct: 166 GTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 197
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 45/229 (19%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---RE-FL 329
+ M ++G GGFG V LR + ++ ++ AIK+ + S RE +
Sbjct: 17 WEMKERLGTGGFGYV----LRWIHQDTG-----------EQVAIKQCRQELSPKNRERWC 61
Query: 330 AELKVLTHVHHLNLVR-------LIGYCVEGSLFLVYEYIENGNLSEHLR------GSGR 376
E++++ ++H N+V L L EY E G+L ++L G
Sbjct: 62 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE 121
Query: 377 DPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTK 433
P+ R ++ D + L Y+HE+ + IHRD+K NI++ + K+ D G K
Sbjct: 122 GPI----RTLLS-DISSALRYLHENRI---IHRDLKPENIVLQPGPQRLIHKIIDLGYAK 173
Query: 434 LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
E+ L T VGT Y+ PE + + VD ++FG + +E I+
Sbjct: 174 --ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
+FL E + H ++V+LIG E ++++ E G L L+ + L +S +
Sbjct: 85 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLIL 143
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
A + L Y+ ++HRDI + N+L+ N K+ DFGL++ E + ++
Sbjct: 144 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 200
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
+M PE + + DV+ FGV ++E++
Sbjct: 201 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 15/170 (8%)
Query: 323 QASREFL-AELKVLTHVHHLNLVRLIGYCVE---GSLFLVYEYIENGNLSEHL-RGSG-R 376
+A ++ L +E+ +L + H N+VR ++ +L++V EY E G+L+ + +G+ R
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 377 DPLPWSSRVQIALDSARGLEYIHE-----HTVPVYIHRDIKSANILIDKNFHAKVADFGL 431
L +++ L+ H HTV +HRD+K AN+ +D + K+ DFGL
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTV---LHRDLKPANVFLDGKQNVKLGDFGL 162
Query: 432 TKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
++ VGT YM PE + K D+++ G +LYEL +
Sbjct: 163 ARILN-HDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 45/229 (19%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQAS---RE-FL 329
+ M ++G GGFG V LR + ++ ++ AIK+ + S RE +
Sbjct: 16 WEMKERLGTGGFGYV----LRWIHQDTG-----------EQVAIKQCRQELSPKNRERWC 60
Query: 330 AELKVLTHVHHLNLVR-------LIGYCVEGSLFLVYEYIENGNLSEHLR------GSGR 376
E++++ ++H N+V L L EY E G+L ++L G
Sbjct: 61 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE 120
Query: 377 DPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTK 433
P+ R ++ D + L Y+HE+ + IHRD+K NI++ + K+ D G K
Sbjct: 121 GPI----RTLLS-DISSALRYLHENRI---IHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172
Query: 434 LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
E+ L T VGT Y+ PE + + VD ++FG + +E I+
Sbjct: 173 --ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 71
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 130
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 131 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 183
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 239
Query: 508 NLPDP 512
LP P
Sbjct: 240 RLPQP 244
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 69
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 128
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 129 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 181
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 237
Query: 508 NLPDP 512
LP P
Sbjct: 238 RLPQP 242
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
+FL E + H ++V+LIG E ++++ E G L L+ + L +S +
Sbjct: 62 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLIL 120
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
A + L Y+ ++HRDI + N+L+ N K+ DFGL++ E + ++
Sbjct: 121 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 177
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
+M PE + + DV+ FGV ++E++
Sbjct: 178 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPE--GEKVKIPVAIKELREATSPK-----ANKEILDEA 72
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 131
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 132 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 184
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 240
Query: 508 NLPDP 512
LP P
Sbjct: 241 RLPQP 245
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 68
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVR-EHKDNIGSQYLLNWCVQIA 127
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 128 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 180
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 236
Query: 508 NLPDP 512
LP P
Sbjct: 237 RLPQP 241
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
+FL E + H ++V+LIG E ++++ E G L L+ + L +S +
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLIL 115
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
A + L Y+ ++HRDI + N+L+ N K+ DFGL++ E + ++
Sbjct: 116 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
+M PE + + DV+ FGV ++E++
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPE--GEKVKIPVAIKELREATSPK-----ANKEILDEA 93
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 94 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 152
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 153 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 205
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 206 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 261
Query: 508 NLPDP 512
LP P
Sbjct: 262 RLPQP 266
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 68
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 127
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 128 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 180
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 236
Query: 508 NLPDP 512
LP P
Sbjct: 237 RLPQP 241
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
+FL E + H ++V+LIG E ++++ E G L L+ + L +S +
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLIL 115
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
A + L Y+ ++HRDI + N+L+ N K+ DFGL++ E + ++
Sbjct: 116 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
+M PE + + DV+ FGV ++E++
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 70
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 129
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 130 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 182
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 238
Query: 508 NLPDP 512
LP P
Sbjct: 239 RLPQP 243
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
+FL E + H ++V+LIG E ++++ E G L L+ + L +S +
Sbjct: 59 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLIL 117
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
A + L Y+ ++HRDI + N+L+ N K+ DFGL++ E + ++
Sbjct: 118 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 174
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
+M PE + + DV+ FGV ++E++
Sbjct: 175 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQAS---- 325
+++ + +G+G G V A VN + ++A A+K +DM+ +
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLA----------------VNRVTEEAVAVKIVDMKRAVDCP 48
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E+ + ++H N+V+ G+ EG++ +L EY G L + + P P + R
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 108
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSAS-LP 443
L + G+ Y+H + HRDIK N+L+D+ + K++DFGL + + L
Sbjct: 109 FFHQLMA--GVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 444 TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
++ GT Y+ PE + + + VDV++ G+VL +++ +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 294 RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEG 353
+G YG Y R + + + I + D + S+ E+ + H+ H N+V+ +G E
Sbjct: 32 KGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN 91
Query: 354 SLFLVY-EYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR---GLEYIHEHTVPVYIHR 409
++ E + G+LS LR S PL + + I + + GL+Y+H++ + +HR
Sbjct: 92 GFIKIFMEQVPGGSLSALLR-SKWGPLKDNEQT-IGFYTKQILEGLKYLHDNQI---VHR 146
Query: 410 DIKSANILIDKNFHA-KVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYG--DVSPK 466
DIK N+LI+ K++DFG +K G GT YM PE G
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 205
Query: 467 VDVYAFGVVLYELISAK 483
D+++ G + E+ + K
Sbjct: 206 ADIWSLGCTIIEMATGK 222
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
+FL E + H ++V+LIG E ++++ E G L L+ + L +S +
Sbjct: 60 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLIL 118
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
A + L Y+ ++HRDI + N+L+ N K+ DFGL++ E + ++
Sbjct: 119 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 175
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
+M PE + + DV+ FGV ++E++
Sbjct: 176 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+D + +G+G FG V + + + V ++ ++ +K D ++ L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCK------DKITGQECAVKVISKRQVKQKTDKES---LLR 75
Query: 331 ELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+++L + H N+++L + + G +LV E G L + + R ++R+ +
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 135
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGSASLPTRL 446
S G+ Y+H++ + +HRD+K N+L++ K+ + ++ DFGL+ T ++
Sbjct: 136 LS--GITYMHKNKI---VHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDK 188
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+GT Y+ PE +G K DV++ GV+LY L+S
Sbjct: 189 IGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 223
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPE--GEKVKIPVAIKELREATSPK-----ANKEILDEA 71
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 130
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 131 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 183
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 239
Query: 508 NLPDP 512
LP P
Sbjct: 240 RLPQP 244
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPE--GEKVKIPVAIKELREATSPK-----ANKEILDEA 75
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 134
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 135 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 187
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 243
Query: 508 NLPDP 512
LP P
Sbjct: 244 RLPQP 248
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
+FL E + H ++V+LIG E ++++ E G L L+ + L +S +
Sbjct: 54 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLIL 112
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
A + L Y+ ++HRDI + N+L+ N K+ DFGL++ E + ++
Sbjct: 113 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 169
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
+M PE + + DV+ FGV ++E++
Sbjct: 170 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 68
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 127
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 128 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 180
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 236
Query: 508 NLPDP 512
LP P
Sbjct: 237 RLPQP 241
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+D + +G+G FG V + + + V ++ ++ +K D ++ L
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCK------DKITGQECAVKVISKRQVKQKTDKES---LLR 99
Query: 331 ELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+++L + H N+++L + + G +LV E G L + + R ++R+ +
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 159
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGSASLPTRL 446
S G+ Y+H++ + +HRD+K N+L++ K+ + ++ DFGL+ T ++
Sbjct: 160 LS--GITYMHKNKI---VHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDK 212
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+GT Y+ PE +G K DV++ GV+LY L+S
Sbjct: 213 IGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 247
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 78
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 79 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 137
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 138 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 190
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 191 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 246
Query: 508 NLPDP 512
LP P
Sbjct: 247 RLPQP 251
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+D + +G+G FG V + + + V ++ ++ +K D ++ L
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCK------DKITGQECAVKVISKRQVKQKTDKES---LLR 98
Query: 331 ELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+++L + H N+++L + + G +LV E G L + + R ++R+ +
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 158
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGSASLPTRL 446
S G+ Y+H++ + +HRD+K N+L++ K+ + ++ DFGL+ T ++
Sbjct: 159 LS--GITYMHKNKI---VHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDK 211
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+GT Y+ PE +G K DV++ GV+LY L+S
Sbjct: 212 IGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 246
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPE--GEKVKIPVAIKELREATSPK-----ANKEILDEA 71
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 130
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 131 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 183
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 239
Query: 508 NLPDP 512
LP P
Sbjct: 240 RLPQP 244
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 68
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 127
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 128 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 180
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 236
Query: 508 NLPDP 512
LP P
Sbjct: 237 RLPQP 241
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 70
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 129
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 130 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 182
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 238
Query: 508 NLPDP 512
LP P
Sbjct: 239 RLPQP 243
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+D + +G+G FG V + + + V ++ ++ +K D ++ L
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCK------DKITGQECAVKVISKRQVKQKTDKES---LLR 81
Query: 331 ELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+++L + H N+++L + + G +LV E G L + + R ++R+ +
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 141
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGSASLPTRL 446
S G+ Y+H++ + +HRD+K N+L++ K+ + ++ DFGL+ T ++
Sbjct: 142 LS--GITYMHKNKI---VHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDK 194
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+GT Y+ PE +G K DV++ GV+LY L+S
Sbjct: 195 IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 71
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 130
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 131 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 183
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 239
Query: 508 NLPDP 512
LP P
Sbjct: 240 RLPQP 244
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPE--GEKVKIPVAIKELREATSPK-----ANKEILDEA 74
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 75 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 133
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 134 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 186
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 187 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 242
Query: 508 NLPDP 512
LP P
Sbjct: 243 RLPQP 247
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 62
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 63 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 121
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 122 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 174
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 175 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 230
Query: 508 NLPDP 512
LP P
Sbjct: 231 RLPQP 235
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 294 RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEG 353
+G YG Y R + + + I + D + S+ E+ + H+ H N+V+ +G E
Sbjct: 18 KGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN 77
Query: 354 SLFLVY-EYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR---GLEYIHEHTVPVYIHR 409
++ E + G+LS LR S PL + + I + + GL+Y+H++ + +HR
Sbjct: 78 GFIKIFMEQVPGGSLSALLR-SKWGPLKDNEQT-IGFYTKQILEGLKYLHDNQI---VHR 132
Query: 410 DIKSANILIDKNFHA-KVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYG--DVSPK 466
DIK N+LI+ K++DFG +K G GT YM PE G
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 191
Query: 467 VDVYAFGVVLYELISAK 483
D+++ G + E+ + K
Sbjct: 192 ADIWSLGCTIIEMATGK 208
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 30/249 (12%)
Query: 264 YEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
+++ D + +G G F V AE + +L+ + + ++A K +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAE------DKRTQKLVAIKCIAKEALEGK---E 60
Query: 324 ASREFLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
S E E+ VL + H N+V L Y G L+L+ + + G L + + G +
Sbjct: 61 GSME--NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA 118
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANIL---IDKNFHAKVADFGLTKLTEVGS 439
SR+ + A ++Y+H+ + +HRD+K N+L +D++ ++DFGL+K+ + GS
Sbjct: 119 SRLIFQVLDA--VKYLHDLGI---VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 440 ASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGL 499
+ + GT GY+ PE S VD ++ GV+ Y L+ N D+K
Sbjct: 174 --VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN----DAK-- 225
Query: 500 VALFEEVLN 508
LFE++L
Sbjct: 226 --LFEQILK 232
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
+FL E + H ++V+LIG E ++++ E G L L+ + L +S +
Sbjct: 437 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR-KFSLDLASLIL 495
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
A + L Y+ ++HRDI + N+L+ N K+ DFGL++ E + ++
Sbjct: 496 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 552
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
+M PE + + DV+ FGV ++E++
Sbjct: 553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 102/236 (43%), Gaps = 59/236 (25%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR--EFLAELKVLTH 337
+GQG FG V A N+ SR AIKK+ + L+E+ +L
Sbjct: 14 LGQGAFGQVVKAR------NALDSRYY---------AIKKIRHTEEKLSTILSEVXLLAS 58
Query: 338 VHHLNLVRLIGYCVE--------------GSLFLVYEYIENGNL-----SEHLRGSGRDP 378
++H +VR +E +LF+ EY EN L SE+L RD
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENL-NQQRDE 117
Query: 379 LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK----- 433
W QI L YIH + IHR++K NI ID++ + K+ DFGL K
Sbjct: 118 Y-WRLFRQIL----EALSYIHSQGI---IHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 434 --LTEVGSASLP------TRLVGTFGYMPPEYAQ-YGDVSPKVDVYAFGVVLYELI 480
+ ++ S +LP T +GT Y+ E G + K+D Y+ G++ +E I
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 106/216 (49%), Gaps = 21/216 (9%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+D + +G+G FG V + + + V ++ ++ +K D ++ L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCK------DKITGQECAVKVISKRQVKQKTDKES---LLR 75
Query: 331 ELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+++L + H N+ +L + + G +LV E G L + + R ++R+ +
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 135
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGSASLPTRL 446
S G+ Y H++ + +HRD+K N+L++ K+ + ++ DFGL+ T ++
Sbjct: 136 LS--GITYXHKNKI---VHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKXKDK 188
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+GT Y+ PE +G K DV++ GV+LY L+S
Sbjct: 189 IGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 223
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 38/253 (15%)
Query: 264 YEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
+++ D + +G G F V AE + +L+ + + ++A K +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAE------DKRTQKLVAIKCIAKEALEGK---E 60
Query: 324 ASREFLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSG----RDP 378
S E E+ VL + H N+V L Y G L+L+ + + G L + + G RD
Sbjct: 61 GSME--NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD- 117
Query: 379 LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANIL---IDKNFHAKVADFGLTKLT 435
+SR+ + A ++Y+H+ + +HRD+K N+L +D++ ++DFGL+K+
Sbjct: 118 ---ASRLIFQVLDA--VKYLHDLGI---VHRDLKPENLLYYSLDEDSKIMISDFGLSKME 169
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
+ GS + + GT GY+ PE S VD ++ GV+ Y L+ N D
Sbjct: 170 DPGS--VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN----D 223
Query: 496 SKGLVALFEEVLN 508
+K LFE++L
Sbjct: 224 AK----LFEQILK 232
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 38/253 (15%)
Query: 264 YEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ 323
+++ D + +G G F V AE + +L+ + + ++A K +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAE------DKRTQKLVAIKCIAKEALEGK---E 60
Query: 324 ASREFLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSG----RDP 378
S E E+ VL + H N+V L Y G L+L+ + + G L + + G RD
Sbjct: 61 GSME--NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD- 117
Query: 379 LPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANIL---IDKNFHAKVADFGLTKLT 435
+SR+ + A ++Y+H+ + +HRD+K N+L +D++ ++DFGL+K+
Sbjct: 118 ---ASRLIFQVLDA--VKYLHDLGI---VHRDLKPENLLYYSLDEDSKIMISDFGLSKME 169
Query: 436 EVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
+ GS + + GT GY+ PE S VD ++ GV+ Y L+ N D
Sbjct: 170 DPGS--VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN----D 223
Query: 496 SKGLVALFEEVLN 508
+K LFE++L
Sbjct: 224 AK----LFEQILK 232
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE---- 327
D + MS +G G G V A R C + ++ + +K + ++RE
Sbjct: 10 DEYIMSKTLGSGACGEVKLA----------FERKTCKKVAIKIISKRKFAIGSAREADPA 59
Query: 328 --FLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRV 385
E+++L ++H ++++ + ++V E +E G L + + G+ R L ++
Sbjct: 60 LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCK 117
Query: 386 QIALDSARGLEYIHEHTVPVYIHRDIKSANILI---DKNFHAKVADFGLTKLTEVGSASL 442
++Y+HE+ + IHRD+K N+L+ +++ K+ DFG +K+ +G SL
Sbjct: 118 LYFYQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSL 172
Query: 443 PTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISA 482
L GT Y+ PE + VD ++ GV+L+ +S
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G+GGF + + + +++ +LL++ +KM M E+ + +
Sbjct: 25 LGKGGFAKCFEIS-DADTKEVFAGKIVPKSLLLKPHQREKMSM--------EISIHRSLA 75
Query: 340 HLNLVRLIGYCVEGS-LFLVYEYIENGNLSE--HLRGSGRDPLPWSSRVQIALDSARGLE 396
H ++V G+ + +F+V E +L E R + +P QI L G +
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVL----GCQ 131
Query: 397 YIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPE 456
Y+H + V IHRD+K N+ ++++ K+ DFGL E T L GT Y+ PE
Sbjct: 132 YLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE 187
Query: 457 YAQYGDVSPKVDVYAFGVVLYELISAK 483
S +VDV++ G ++Y L+ K
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE---- 327
D + MS +G G G V A R C + ++ + +K + ++RE
Sbjct: 9 DEYIMSKTLGSGACGEVKLA----------FERKTCKKVAIKIISKRKFAIGSAREADPA 58
Query: 328 --FLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRV 385
E+++L ++H ++++ + ++V E +E G L + + G+ R L ++
Sbjct: 59 LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCK 116
Query: 386 QIALDSARGLEYIHEHTVPVYIHRDIKSANILI---DKNFHAKVADFGLTKLTEVGSASL 442
++Y+HE+ + IHRD+K N+L+ +++ K+ DFG +K+ +G SL
Sbjct: 117 LYFYQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSL 171
Query: 443 PTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISA 482
L GT Y+ PE + VD ++ GV+L+ +S
Sbjct: 172 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 99/195 (50%), Gaps = 17/195 (8%)
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
+A++E L E V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQ 124
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
+ + A+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+
Sbjct: 125 YLLNWCVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEK 179
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSK 497
G G +P ++ + ++ DV+++GV ++EL++ G +S S
Sbjct: 180 EYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS- 236
Query: 498 GLVALFEEVLNLPDP 512
++ E+ LP P
Sbjct: 237 ---SILEKGERLPQP 248
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G+GGF + + + +++ +LL++ +KM M E+ + +
Sbjct: 29 LGKGGFAKCFEIS-DADTKEVFAGKIVPKSLLLKPHQREKMSM--------EISIHRSLA 79
Query: 340 HLNLVRLIGYCVEGS-LFLVYEYIENGNLSE--HLRGSGRDPLPWSSRVQIALDSARGLE 396
H ++V G+ + +F+V E +L E R + +P QI L G +
Sbjct: 80 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVL----GCQ 135
Query: 397 YIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPE 456
Y+H + V IHRD+K N+ ++++ K+ DFGL E T L GT Y+ PE
Sbjct: 136 YLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE 191
Query: 457 YAQYGDVSPKVDVYAFGVVLYELISAK 483
S +VDV++ G ++Y L+ K
Sbjct: 192 VLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE---- 327
D + MS +G G G V A R C + ++ + +K + ++RE
Sbjct: 149 DEYIMSKTLGSGACGEVKLA----------FERKTCKKVAIRIISKRKFAIGSAREADPA 198
Query: 328 --FLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRV 385
E+++L ++H ++++ + ++V E +E G L + + G+ R L ++
Sbjct: 199 LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCK 256
Query: 386 QIALDSARGLEYIHEHTVPVYIHRDIKSANILI---DKNFHAKVADFGLTKLTEVGSASL 442
++Y+HE+ + IHRD+K N+L+ +++ K+ DFG +K+ +G SL
Sbjct: 257 LYFYQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSL 311
Query: 443 PTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISA 482
L GT Y+ PE + VD ++ GV+L+ +S
Sbjct: 312 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE---- 327
D + MS +G G G V A R C + ++ + +K + ++RE
Sbjct: 135 DEYIMSKTLGSGACGEVKLA----------FERKTCKKVAIRIISKRKFAIGSAREADPA 184
Query: 328 --FLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRV 385
E+++L ++H ++++ + ++V E +E G L + + G+ R L ++
Sbjct: 185 LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCK 242
Query: 386 QIALDSARGLEYIHEHTVPVYIHRDIKSANILI---DKNFHAKVADFGLTKLTEVGSASL 442
++Y+HE+ + IHRD+K N+L+ +++ K+ DFG +K+ +G SL
Sbjct: 243 LYFYQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSL 297
Query: 443 PTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISA 482
L GT Y+ PE + VD ++ GV+L+ +S
Sbjct: 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 22/207 (10%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G+G FG V + R Y ++I KA+ K D L E+++L +
Sbjct: 30 LGKGSFGEVLKCKDRIT-QQEYAVKVI------NKASAKNKDTST---ILREVELLKKLD 79
Query: 340 HLNLVRLIGYCVEGSLF-LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYI 398
H N+++L + S F +V E G L + + R ++R+ + S G+ Y+
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYM 137
Query: 399 HEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPP 455
H+H + +HRD+K NIL++ K+ K+ DFGL+ + + + R +GT Y+ P
Sbjct: 138 HKHNI---VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDR-IGTAYYIAP 192
Query: 456 EYAQYGDVSPKVDVYAFGVVLYELISA 482
E + G K DV++ GV+LY L+S
Sbjct: 193 EVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G+GGF + + + +++ +LL++ +KM M E+ + +
Sbjct: 25 LGKGGFAKCFEIS-DADTKEVFAGKIVPKSLLLKPHQREKMSM--------EISIHRSLA 75
Query: 340 HLNLVRLIGYCVEGS-LFLVYEYIENGNLSE--HLRGSGRDPLPWSSRVQIALDSARGLE 396
H ++V G+ + +F+V E +L E R + +P QI L G +
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVL----GCQ 131
Query: 397 YIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPE 456
Y+H + V IHRD+K N+ ++++ K+ DFGL E T L GT Y+ PE
Sbjct: 132 YLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE 187
Query: 457 YAQYGDVSPKVDVYAFGVVLYELISAK 483
S +VDV++ G ++Y L+ K
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE---- 327
D + MS +G G G V A R C + ++ + +K + ++RE
Sbjct: 10 DEYIMSKTLGSGACGEVKLA----------FERKTCKKVAIKIISKRKFAIGSAREADPA 59
Query: 328 --FLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRV 385
E+++L ++H ++++ + ++V E +E G L + + G+ R L ++
Sbjct: 60 LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCK 117
Query: 386 QIALDSARGLEYIHEHTVPVYIHRDIKSANILI---DKNFHAKVADFGLTKLTEVGSASL 442
++Y+HE+ + IHRD+K N+L+ +++ K+ DFG +K+ +G SL
Sbjct: 118 LYFYQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSL 172
Query: 443 PTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISA 482
L GT Y+ PE + VD ++ GV+L+ +S
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE---- 327
D + MS +G G G V A R C + ++ + +K + ++RE
Sbjct: 10 DEYIMSKTLGSGACGEVKLA----------FERKTCKKVAIKIISKRKFAIGSAREADPA 59
Query: 328 --FLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRV 385
E+++L ++H ++++ + ++V E +E G L + + G+ R L ++
Sbjct: 60 LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCK 117
Query: 386 QIALDSARGLEYIHEHTVPVYIHRDIKSANILI---DKNFHAKVADFGLTKLTEVGSASL 442
++Y+HE+ + IHRD+K N+L+ +++ K+ DFG +K+ +G SL
Sbjct: 118 LYFYQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSL 172
Query: 443 PTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISA 482
L GT Y+ PE + VD ++ GV+L+ +S
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 26/232 (11%)
Query: 278 HKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTH 337
KIG+G +G V+ A+ R + L R+ + D L E+ +L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRV----------RLDDDDEGVPSSALREICLLKE 57
Query: 338 VHHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLE 396
+ H N+VRL + L LV+E+ + +L ++ D P + +GL
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVK-SFLFQLLKGLG 115
Query: 397 YIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL----VGTFGY 452
+ H V +HRD+K N+LI++N K+A+FGL + + +P R V T Y
Sbjct: 116 FCHSRNV---LHRDLKPQNLLINRNGELKLANFGLAR-----AFGIPVRCYSAEVVTLWY 167
Query: 453 MPPEYAQYGDV-SPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALF 503
PP+ + S +D+++ G + EL +A + GN K + L
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE---- 327
D + MS +G G G V A R C + ++ + +K + ++RE
Sbjct: 16 DEYIMSKTLGSGACGEVKLA----------FERKTCKKVAIKIISKRKFAIGSAREADPA 65
Query: 328 --FLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRV 385
E+++L ++H ++++ + ++V E +E G L + + G+ R L ++
Sbjct: 66 LNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCK 123
Query: 386 QIALDSARGLEYIHEHTVPVYIHRDIKSANILI---DKNFHAKVADFGLTKLTEVGSASL 442
++Y+HE+ + IHRD+K N+L+ +++ K+ DFG +K+ +G SL
Sbjct: 124 LYFYQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSL 178
Query: 443 PTRLVGTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELISA 482
L GT Y+ PE + VD ++ GV+L+ +S
Sbjct: 179 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 113/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 65
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 66 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 124
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+ G G
Sbjct: 125 EGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEKEYHAEG--GK 177
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 178 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 233
Query: 508 NLPDP 512
LP P
Sbjct: 234 RLPQP 238
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 99/195 (50%), Gaps = 17/195 (8%)
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
+A++E L E V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQ 117
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
+ + A+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+
Sbjct: 118 YLLNWCVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEK 172
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSK 497
G G +P ++ + ++ DV+++GV ++EL++ G +S S
Sbjct: 173 EYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS- 229
Query: 498 GLVALFEEVLNLPDP 512
++ E+ LP P
Sbjct: 230 ---SILEKGERLPQP 241
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 99/195 (50%), Gaps = 17/195 (8%)
Query: 323 QASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
+A++E L E V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQ 124
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL 442
+ + A+G+ Y+ + + +HRD+ + N+L+ H K+ DFGL KL +G+
Sbjct: 125 YLLNWCVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKL--LGAEEK 179
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSK 497
G G +P ++ + ++ DV+++GV ++EL++ G +S S
Sbjct: 180 EYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS- 236
Query: 498 GLVALFEEVLNLPDP 512
++ E+ LP P
Sbjct: 237 ---SILEKGERLPQP 248
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 14/210 (6%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++FS+ IG+GGFG VY + + G Y + C++ ++ +K+ + A E +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCR-KADTGKMYAMK--CLD--KKRIKMKQGETLALNERIML 242
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
V T + + L + + + G+L HL G + A +
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEI 300
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFG 451
GLE++H V ++RD+K ANIL+D++ H +++D GL S P VGT G
Sbjct: 301 ILGLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDF---SKKKPHASVGTHG 354
Query: 452 YMPPEYAQYG-DVSPKVDVYAFGVVLYELI 480
YM PE Q G D ++ G +L++L+
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLL 384
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 14/210 (6%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++FS+ IG+GGFG VY + + G Y + C++ ++ +K+ + A E +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCR-KADTGKMYAMK--CLD--KKRIKMKQGETLALNERIML 243
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
V T + + L + + + G+L HL G + A +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEI 301
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFG 451
GLE++H V ++RD+K ANIL+D++ H +++D GL S P VGT G
Sbjct: 302 ILGLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDF---SKKKPHASVGTHG 355
Query: 452 YMPPEYAQYG-DVSPKVDVYAFGVVLYELI 480
YM PE Q G D ++ G +L++L+
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 40/246 (16%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+D F + ++G+G VY + +G L K K +D + R
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYAL-----------KVLKKTVDKKIVR---T 97
Query: 331 ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSG----RDPLPWSSRV 385
E+ VL + H N+++L + + LV E + G L + + G RD + V
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDA---ADAV 154
Query: 386 QIALDSARGLEYIHEHTVPVYIHRDIKSANILIDK---NFHAKVADFGLTKLTEVGSASL 442
+ L++ + Y+HE+ + +HRD+K N+L + K+ADFGL+K+ E L
Sbjct: 155 KQILEA---VAYLHENGI---VHRDLKPENLLYATPAPDAPLKIADFGLSKIVE--HQVL 206
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVAL 502
+ GT GY PE + P+VD+++ G++ Y L+ E D +G +
Sbjct: 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFY-------DERGDQFM 259
Query: 503 FEEVLN 508
F +LN
Sbjct: 260 FRRILN 265
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 14/210 (6%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++FS+ IG+GGFG VY + + G Y + C++ ++ +K+ + A E +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCR-KADTGKMYAMK--CLD--KKRIKMKQGETLALNERIML 243
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
V T + + L + + + G+L HL G + A +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEI 301
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFG 451
GLE++H V ++RD+K ANIL+D++ H +++D GL S P VGT G
Sbjct: 302 ILGLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDF---SKKKPHASVGTHG 355
Query: 452 YMPPEYAQYG-DVSPKVDVYAFGVVLYELI 480
YM PE Q G D ++ G +L++L+
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 14/210 (6%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
++FS+ IG+GGFG VY + + G Y + C++ ++ +K+ + A E +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCR-KADTGKMYAMK--CLD--KKRIKMKQGETLALNERIML 243
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
V T + + L + + + G+L HL G + A +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEI 301
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFG 451
GLE++H V ++RD+K ANIL+D++ H +++D GL S P VGT G
Sbjct: 302 ILGLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDF---SKKKPHASVGTHG 355
Query: 452 YMPPEYAQYG-DVSPKVDVYAFGVVLYELI 480
YM PE Q G D ++ G +L++L+
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 45/218 (20%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQ--------ASREFLAE 331
+G+G F VY A R + N Q AIKK+ + +R L E
Sbjct: 18 LGEGQFATVYKA--RDKNTN-------------QIVAIKKIKLGHRSEAKDGINRTALRE 62
Query: 332 LKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
+K+L + H N++ L+ + + ++ LV++++E +L ++ + P + + L
Sbjct: 63 IKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYM-LM 120
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL---- 446
+ +GLEY+H+H + +HRD+K N+L+D+N K+ADFGL K S P R
Sbjct: 121 TLQGLEYLHQHWI---LHRDLKPNNLLLDENGVLKLADFGLAK-----SFGSPNRAYXHQ 172
Query: 447 VGTFGYMPPEY----AQYGDVSPKVDVYAFGVVLYELI 480
V T Y PE YG VD++A G +L EL+
Sbjct: 173 VVTRWYRAPELLFGARMYG---VGVDMWAVGCILAELL 207
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 113/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 70
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 129
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFG KL +G+ G G
Sbjct: 130 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYHAEG--GK 182
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 238
Query: 508 NLPDP 512
LP P
Sbjct: 239 RLPQP 243
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 113/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 72
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 131
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFG KL +G+ G G
Sbjct: 132 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYHAEG--GK 184
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 240
Query: 508 NLPDP 512
LP P
Sbjct: 241 RLPQP 245
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 113/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 70
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 129
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFG KL +G+ G G
Sbjct: 130 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYHAEG--GK 182
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 238
Query: 508 NLPDP 512
LP P
Sbjct: 239 RLPQP 243
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 22/207 (10%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G+G FG V + R Y ++I KA+ K D L E+++L +
Sbjct: 30 LGKGSFGEVLKCKDRIT-QQEYAVKVI------NKASAKNKDTST---ILREVELLKKLD 79
Query: 340 HLNLVRLIGYCVEGSLF-LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYI 398
H N+++L + S F +V E G L + + R ++R+ + S G+ Y+
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYM 137
Query: 399 HEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPP 455
H+H + +HRD+K NIL++ K+ K+ DFGL+ + + + R +GT Y+ P
Sbjct: 138 HKHNI---VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDR-IGTAYYIAP 192
Query: 456 EYAQYGDVSPKVDVYAFGVVLYELISA 482
E + G K DV++ GV+LY L+S
Sbjct: 193 EVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 22/207 (10%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G+G FG V + R Y ++I KA+ K D L E+++L +
Sbjct: 30 LGKGSFGEVLKCKDRIT-QQEYAVKVI------NKASAKNKDTST---ILREVELLKKLD 79
Query: 340 HLNLVRLIGYCVEGSLF-LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYI 398
H N+++L + S F +V E G L + + R ++R+ + S G+ Y+
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYM 137
Query: 399 HEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPP 455
H+H + +HRD+K NIL++ K+ K+ DFGL+ + + + R +GT Y+ P
Sbjct: 138 HKHNI---VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDR-IGTAYYIAP 192
Query: 456 EYAQYGDVSPKVDVYAFGVVLYELISA 482
E + G K DV++ GV+LY L+S
Sbjct: 193 EVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
+FL E + H ++V+LIG E ++++ E G L L+ + L +S +
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR-KFSLDLASLIL 115
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
A + L Y+ ++HRDI + N+L+ K+ DFGL++ E + ++
Sbjct: 116 YAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
+M PE + + DV+ FGV ++E++
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 23/215 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D++ + ++G G FG V+ R GN++ ++ + K ++K E
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERAT-GNNFAAKFVMTPHESDKETVRK-----------E 204
Query: 332 LKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
++ ++ + H LV L + + + ++YE++ G L E + + + V+
Sbjct: 205 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQ 263
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILI--DKNFHAKVADFGLT-KLTEVGSASLPTRLV 447
+GL ++HE+ Y+H D+K NI+ ++ K+ DFGLT L S + T
Sbjct: 264 VCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--- 317
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
GT + PE A+ V D+++ GV+ Y L+S
Sbjct: 318 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 113/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPE--GEKVKIPVAIKELREATSPK-----ANKEILDEA 75
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 134
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFG KL +G+ G G
Sbjct: 135 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYHAEG--GK 187
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 243
Query: 508 NLPDP 512
LP P
Sbjct: 244 RLPQP 248
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 113/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 68
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 127
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFG KL +G+ G G
Sbjct: 128 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYHAEG--GK 180
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 236
Query: 508 NLPDP 512
LP P
Sbjct: 237 RLPQP 241
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 113/245 (46%), Gaps = 24/245 (9%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAEL 332
F +G G FG VY E + + + L + + K A++E L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPK-----ANKEILDEA 70
Query: 333 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA 392
V+ V + ++ RL+G C+ ++ L+ + + G L +++R +D + + + A
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIA 129
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGY 452
+G+ Y+ + + +HRD+ + N+L+ H K+ DFG KL +G+ G G
Sbjct: 130 KGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKL--LGAEEKEYHAEG--GK 182
Query: 453 MPPEYAQYGDVSPKV-----DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVL 507
+P ++ + ++ DV+++GV ++EL++ G +S S ++ E+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----SILEKGE 238
Query: 508 NLPDP 512
LP P
Sbjct: 239 RLPQP 243
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 23/215 (10%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D++ + ++G G FG V+ R GN++ ++ + K ++K E
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERAT-GNNFAAKFVMTPHESDKETVRK-----------E 98
Query: 332 LKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
++ ++ + H LV L + + + ++YE++ G L E + + + V+
Sbjct: 99 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQ 157
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILI--DKNFHAKVADFGLT-KLTEVGSASLPTRLV 447
+GL ++HE+ Y+H D+K NI+ ++ K+ DFGLT L S + T
Sbjct: 158 VCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--- 211
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
GT + PE A+ V D+++ GV+ Y L+S
Sbjct: 212 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 28/218 (12%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
TD + + IG+G F V ++ G+ Y +++I KK+ + ++
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRC-VKLCTGHEYAAKII---------NTKKLSARDHQKLER 52
Query: 331 ELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRG----SGRDPLPWSSRV 385
E ++ + H N+VRL EG +LV++ + G L E + S D S +
Sbjct: 53 EARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADA---SHCI 109
Query: 386 QIALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGSASL 442
Q L++ +H H + V +HRD+K N+L+ K K+ADFGL + G
Sbjct: 110 QQILEAV-----LHCHQMGV-VHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQA 162
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
GT GY+ PE + VD++A GV+LY L+
Sbjct: 163 WFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILL 200
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 25/232 (10%)
Query: 256 VDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA 315
VD E Y + + +N + +G+G +G V N R++ + ++
Sbjct: 12 VDLGTENLYFQSMEKYENLGL---VGEGSYGMVMKCR------NKDTGRIVAIKKFLESD 62
Query: 316 AIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSE-HLRG 373
K + A RE +K+L + H NLV L+ C + +LV+E++++ L + L
Sbjct: 63 DDKMVKKIAMRE----IKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP 118
Query: 374 SGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+G D + + G+ + H H + IHRDIK NIL+ ++ K+ DFG +
Sbjct: 119 NGLD---YQVVQKYLFQIINGIGFCHSHNI---IHRDIKPENILVSQSGVVKLCDFGFAR 172
Query: 434 LTEVGSASLPTRLVGTFGYMPPEYAQYGDVS--PKVDVYAFGVVLYELISAK 483
T + V T Y PE GDV VDV+A G ++ E+ +
Sbjct: 173 -TLAAPGEVYDDEVATRWYRAPELL-VGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
TD + + ++G+G F V ++ G Y +++I KK+ + ++
Sbjct: 3 TDEYQLFEELGKGAFSVVRRC-MKIPTGQEYAAKII---------NTKKLSARDHQKLER 52
Query: 331 ELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E ++ + H N+VRL EG +LV++ + G L E + + S +
Sbjct: 53 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-----EYYSEADASH 107
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILI---DKNFHAKVADFGLTKLTEVGSASLPTRL 446
+ LE ++ + +HRD+K N+L+ K K+ADFGL + G
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGF 166
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
GT GY+ PE + VD++A GV+LY L+
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILL 200
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G+GGF + + + +++ +LL++ +KM M E+ + +
Sbjct: 47 LGKGGFAKCFEIS-DADTKEVFAGKIVPKSLLLKPHQREKMSM--------EISIHRSLA 97
Query: 340 HLNLVRLIGYCVEGS-LFLVYEYIENGNLSE--HLRGSGRDPLPWSSRVQIALDSARGLE 396
H ++V G+ + +F+V E +L E R + +P QI L G +
Sbjct: 98 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVL----GCQ 153
Query: 397 YIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPE 456
Y+H + V IHRD+K N+ ++++ K+ DFGL E L GT Y+ PE
Sbjct: 154 YLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPE 209
Query: 457 YAQYGDVSPKVDVYAFGVVLYELISAK 483
S +VDV++ G ++Y L+ K
Sbjct: 210 VLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G+GGF + + + +++ +LL++ +KM M E+ + +
Sbjct: 49 LGKGGFAKCFEIS-DADTKEVFAGKIVPKSLLLKPHQREKMSM--------EISIHRSLA 99
Query: 340 HLNLVRLIGYCVEGS-LFLVYEYIENGNLSE--HLRGSGRDPLPWSSRVQIALDSARGLE 396
H ++V G+ + +F+V E +L E R + +P QI L G +
Sbjct: 100 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVL----GCQ 155
Query: 397 YIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPE 456
Y+H + V IHRD+K N+ ++++ K+ DFGL E L GT Y+ PE
Sbjct: 156 YLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPE 211
Query: 457 YAQYGDVSPKVDVYAFGVVLYELISAK 483
S +VDV++ G ++Y L+ K
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 38/243 (15%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELK 333
F +G G F V AE + +L V + +KA K ++S E E+
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKA------TGKLFAVKCIPKKALKGK---ESSIE--NEIA 72
Query: 334 VLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSG----RDPLPWSSRVQIA 388
VL + H N+V L Y L+LV + + G L + + G +D S+ ++
Sbjct: 73 VLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDA---STLIRQV 129
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILI---DKNFHAKVADFGLTKLTEVGSASLPTR 445
LD+ + Y+H + +HRD+K N+L D+ ++DFGL+K+ G + +
Sbjct: 130 LDA---VYYLHRMGI---VHRDLKPENLLYYSQDEESKIMISDFGLSKME--GKGDVMST 181
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEE 505
GT GY+ PE S VD ++ GV+ Y L+ N DSK LFE+
Sbjct: 182 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN----DSK----LFEQ 233
Query: 506 VLN 508
+L
Sbjct: 234 ILK 236
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G+GGF + + + +++ +LL++ +KM M E+ + +
Sbjct: 23 LGKGGFAKCFEIS-DADTKEVFAGKIVPKSLLLKPHQREKMSM--------EISIHRSLA 73
Query: 340 HLNLVRLIGYCVEGS-LFLVYEYIENGNLSE--HLRGSGRDPLPWSSRVQIALDSARGLE 396
H ++V G+ + +F+V E +L E R + +P QI L G +
Sbjct: 74 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVL----GCQ 129
Query: 397 YIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPE 456
Y+H + V IHRD+K N+ ++++ K+ DFGL E L GT Y+ PE
Sbjct: 130 YLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPE 185
Query: 457 YAQYGDVSPKVDVYAFGVVLYELISAK 483
S +VDV++ G ++Y L+ K
Sbjct: 186 VLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ 386
+FL E + H ++V+LIG E ++++ E G L L+ + L +S +
Sbjct: 437 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVR-KFSLDLASLIL 495
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
A + L Y+ ++HRDI + N+L+ K+ DFGL++ E + ++
Sbjct: 496 YAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG 552
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
+M PE + + DV+ FGV ++E++
Sbjct: 553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
KIG+G +G VY A+ YG ++ ++K ++K D + E+ +L +
Sbjct: 9 KIGEGTYGVVYKAQ--NNYGETFA---------LKKIRLEKEDEGIPSTTIREISILKEL 57
Query: 339 HHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N+V+L + L LV+E+++ + L L + L G+ Y
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H+ V +HRD+K N+LI++ K+ADFGL + + +V + P
Sbjct: 116 CHDRRV---LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVL 172
Query: 458 AQYGDVSPKVDVYAFGVVLYELISA 482
S +D+++ G + E+++
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
TD + + ++G+G F V ++ G Y +++I KK+ + ++
Sbjct: 3 TDEYQLFEELGKGAFSVVRRC-MKIPTGQEYAAKII---------NTKKLSARDHQKLER 52
Query: 331 ELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E ++ + H N+VRL EG +LV++ + G L E + + S +
Sbjct: 53 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-----EYYSEADASH 107
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILI---DKNFHAKVADFGLTKLTEVGSASLPTRL 446
+ LE ++ + +HRD+K N+L+ K K+ADFGL + G
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGF 166
Query: 447 VGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
GT GY+ PE + VD++A GV+LY L+
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILL 200
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 30/226 (13%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR- 326
S D++ M ++G G F V +G G Y ++ I KK + +SR
Sbjct: 22 SMVEDHYEMGEELGSGQFAIVRKCRQKG-TGKEYAAKFI-----------KKRRLXSSRR 69
Query: 327 -----EFLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLP 380
E E+ +L + H N++ L + + + L+ E + G L + L + ++ L
Sbjct: 70 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLT 127
Query: 381 WSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTE 436
Q G+ Y+H + H D+K NI L+DKN K+ DFG+ E
Sbjct: 128 EDEATQFLKQILDGVHYLHSKRIA---HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 184
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
G+ + GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 185 AGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
KIG+G +G VY A+ YG ++ ++K ++K D + E+ +L +
Sbjct: 9 KIGEGTYGVVYKAQ--NNYGETFA---------LKKIRLEKEDEGIPSTTIREISILKEL 57
Query: 339 HHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N+V+L + L LV+E+++ + L L + L G+ Y
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H+ V +HRD+K N+LI++ K+ADFGL + + +V + P
Sbjct: 116 CHDRRV---LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL 172
Query: 458 AQYGDVSPKVDVYAFGVVLYELISA 482
S +D+++ G + E+++
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 30/226 (13%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR- 326
S D++ M ++G G F V +G G Y ++ I KK + +SR
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKG-TGKEYAAKFI-----------KKRRLSSSRR 48
Query: 327 -----EFLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLP 380
E E+ +L + H N++ L + + + L+ E + G L + L + ++ L
Sbjct: 49 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLT 106
Query: 381 WSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTE 436
Q G+ Y+H + H D+K NI L+DKN K+ DFG+ E
Sbjct: 107 EDEATQFLKQILDGVHYLHSKRIA---HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
G+ + GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 164 AGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
KIG+G +G VY A+ YG ++ ++K ++K D + E+ +L +
Sbjct: 9 KIGEGTYGVVYKAQ--NNYGETFA---------LKKIRLEKEDEGIPSTTIREISILKEL 57
Query: 339 HHLNLVRLIGYC-VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEY 397
H N+V+L + L LV+E+++ + L L + L G+ Y
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 398 IHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H+ V +HRD+K N+LI++ K+ADFGL + + +V + P
Sbjct: 116 CHDRRV---LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL 172
Query: 458 AQYGDVSPKVDVYAFGVVLYELISA 482
S +D+++ G + E+++
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 327 EFLAELKVLTHVHHLNLVRLIGYCVEGSLF-LVYEYIENGNLSEHLRGSGRDPLPWSSRV 385
E E+ +L + H N+++L + F LV E+ E G L E + R
Sbjct: 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI--INRHKFDECDAA 149
Query: 386 QIALDSARGLEYIHEHTVPVYIHRDIKSANILID-KN--FHAKVADFGLTKLTEVGSASL 442
I G+ Y+H+H + +HRDIK NIL++ KN + K+ DFGL+ L
Sbjct: 150 NIMKQILSGICYLHKHNI---VHRDIKPENILLENKNSLLNIKIVDFGLSSFFS-KDYKL 205
Query: 443 PTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
RL GT Y+ PE + + K DV++ GV++Y L+
Sbjct: 206 RDRL-GTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILL 241
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 41/248 (16%)
Query: 252 NAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYG--NSYLSRLICVN 309
N I ++K V+ E K +++ + + QG F + E ++ Y L+
Sbjct: 15 NLIYLNKYVK----EKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKK 70
Query: 310 LLMQKAAIKKMDMQAS-REFLAELKVLTHVHHLNLVRLIGYCV--EG------SLFLVYE 360
K+ K+ +++ +F EL+++T + + YC+ EG ++++YE
Sbjct: 71 RDFTKSNNDKISIKSKYDDFKNELQIITDIKN-------EYCLTCEGIITNYDEVYIIYE 123
Query: 361 YIENGNL---SEHLRGSGRDP---LPWSSRVQIALDSARGLEYIH-EHTVPVYIHRDIKS 413
Y+EN ++ E+ ++ +P I YIH E + HRD+K
Sbjct: 124 YMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNI---CHRDVKP 180
Query: 414 ANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY----AQYGDVSPKVDV 469
+NIL+DKN K++DFG ++ V +R GT+ +MPPE+ + Y KVD+
Sbjct: 181 SNILMDKNGRVKLSDFGESEYM-VDKKIKGSR--GTYEFMPPEFFSNESSYN--GAKVDI 235
Query: 470 YAFGVVLY 477
++ G+ LY
Sbjct: 236 WSLGICLY 243
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR----- 326
D++ M ++G G F V +G G Y ++ I KK + +SR
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKG-TGKEYAAKFI-----------KKRRLSSSRRGVSR 59
Query: 327 -EFLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSR 384
E E+ +L + H N++ L + + + L+ E + G L + L + ++ L
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEA 117
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTEVGSA 440
Q G+ Y+H + H D+K NI L+DKN K+ DFG+ E G+
Sbjct: 118 TQFLKQILDGVHYLHSKRIA---HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 174
Query: 441 SLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+ GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 175 F--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 33/216 (15%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
+IG+G F VY L V + + +K+ + F E + L +
Sbjct: 33 EIGRGSFKTVYKG----------LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGL 82
Query: 339 HHLNLVRLIGY---CVEGS--LFLVYEYIENGNLSEHLRGSGRDPLP----WSSRVQIAL 389
H N+VR V+G + LV E +G L +L+ + W ++
Sbjct: 83 QHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI---- 138
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILID-KNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+GL+++H T P+ IHRD+K NI I K+ D GL L AS ++G
Sbjct: 139 --LKGLQFLHTRTPPI-IHRDLKCDNIFITGPTGSVKIGDLGLATLK---RASFAKAVIG 192
Query: 449 TFGYMPPE-YAQYGDVSPKVDVYAFGVVLYELISAK 483
T + PE Y + D S VDVYAFG E +++
Sbjct: 193 TPEFXAPEXYEEKYDES--VDVYAFGXCXLEXATSE 226
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 32/189 (16%)
Query: 316 AIKKMDMQASR---EFLAELKVLTHVH---------HLNLVRLI-GYCVEGSLFLVYEYI 362
A+K M++ A R E L E++ T H +++ LI Y +FLV++ +
Sbjct: 123 AVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLM 182
Query: 363 ENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNF 422
G L ++L + + L I + ++H + + +HRD+K NIL+D N
Sbjct: 183 RKGELFDYL--TEKVALSEKETRSIMRSLLEAVSFLHANNI---VHRDLKPENILLDDNM 237
Query: 423 HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPE---------YAQYGDVSPKVDVYAFG 473
+++DFG + E G L GT GY+ PE + YG +VD++A G
Sbjct: 238 QIRLSDFGFSCHLEPGEKL--RELCGTPGYLAPEILKCSMDETHPGYGK---EVDLWACG 292
Query: 474 VVLYELISA 482
V+L+ L++
Sbjct: 293 VILFTLLAG 301
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 35/221 (15%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLM-QKAAIKKMDMQA----- 324
+D + K+G G +G V L+C + L + AIK + +
Sbjct: 20 SDRYQRVKKLGSGAYGEV----------------LLCKDKLTGAERAIKIIKKSSVTTTS 63
Query: 325 -SREFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
S L E+ VL + H N+++L + + + +LV E G L + + R
Sbjct: 64 NSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI--ILRQKFSEV 121
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGS 439
I G Y+H+H + +HRD+K N+L++ ++ K+ DFGL+ EVG
Sbjct: 122 DAAVIMKQVLSGTTYLHKHNI---VHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG- 177
Query: 440 ASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
+ RL GT Y+ PE + K DV++ GV+LY L+
Sbjct: 178 GKMKERL-GTAYYIAPEVLR-KKYDEKCDVWSCGVILYILL 216
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 17/217 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + + IG+G F V + E G + +++ V + D++
Sbjct: 24 DVYELCEVIGKGAFSVVRRC-INRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRV--QIAL 389
LK H H + L L Y +G L++V+E+++ +L + +S V
Sbjct: 83 LK---HPHIVEL--LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILI---DKNFHAKVADFGLTKLTEVGSASLPTR- 445
L Y H++ + IHRD+K N+L+ + + K+ DFG+ ++G + L
Sbjct: 138 QILEALRYCHDNNI---IHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGG 192
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
VGT +M PE + VDV+ GV+L+ L+S
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 44/224 (19%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+D + IG G FG ++RL+ L + A+K ++ A+ +
Sbjct: 19 SDRYDFVKDIGSGNFG---------------VARLMRDKLTKELVAVKYIERGAAIDENV 63
Query: 331 ELKVLTH--VHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI 387
+ +++ H + H N+VR + + L ++ EY G L E + +GR
Sbjct: 64 QREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR----------F 113
Query: 388 ALDSAR--------GLEYIHEHTVPVYIHRDIKSANILIDKN--FHAKVADFGLTKLTEV 437
+ D AR G+ Y H + HRD+K N L+D + K+ DFG +K + +
Sbjct: 114 SEDEARFFFQQLLSGVSYCHSMQI---CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170
Query: 438 GSASLPTRLVGTFGYMPPEYAQYGDVSPKV-DVYAFGVVLYELI 480
S P VGT Y+ PE + K+ DV++ GV LY ++
Sbjct: 171 HSQ--PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVML 212
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 35/221 (15%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLM-QKAAIKKMDMQA----- 324
+D + K+G G +G V L+C + L + AIK + +
Sbjct: 3 SDRYQRVKKLGSGAYGEV----------------LLCKDKLTGAERAIKIIKKSSVTTTS 46
Query: 325 -SREFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGSGRDPLPWS 382
S L E+ VL + H N+++L + + + +LV E G L + + R
Sbjct: 47 NSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI--ILRQKFSEV 104
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGS 439
I G Y+H+H + +HRD+K N+L++ ++ K+ DFGL+ EVG
Sbjct: 105 DAAVIMKQVLSGTTYLHKHNI---VHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG- 160
Query: 440 ASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
+ RL GT Y+ PE + K DV++ GV+LY L+
Sbjct: 161 GKMKERL-GTAYYIAPEVLR-KKYDEKCDVWSCGVILYILL 199
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 44/224 (19%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+D + + IG G FG +R + N L+ V + + +K+D RE
Sbjct: 18 SDRYELVKDIGAGNFGVARL--MRDKQANE----LVAVKYIERG---EKIDENVKRE--- 65
Query: 331 ELKVLTH--VHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI 387
++ H + H N+VR + + L +V EY G L E + +GR
Sbjct: 66 ---IINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----------F 112
Query: 388 ALDSAR--------GLEYIHEHTVPVYIHRDIKSANILIDKN--FHAKVADFGLTKLTEV 437
+ D AR G+ Y H V HRD+K N L+D + K+ADFG +K + +
Sbjct: 113 SEDEARFFFQQLISGVSYAHAMQV---AHRDLKLENTLLDGSPAPRLKIADFGYSKASVL 169
Query: 438 GSASLPTRLVGTFGYMPPEYAQYGDVSPKV-DVYAFGVVLYELI 480
S P VGT Y+ PE + KV DV++ GV LY ++
Sbjct: 170 HSQ--PKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 122/303 (40%), Gaps = 56/303 (18%)
Query: 264 YEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMD-- 321
Y+EL K + + IG GGF V +L C L + AIK MD
Sbjct: 5 YDELLKY---YELHETIGTGGFAKV---------------KLACHILTGEMVAIKIMDKN 46
Query: 322 -----MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGR 376
+ + + LK L H H L ++ +F+V EY G L +++ +
Sbjct: 47 TLGSDLPRIKTEIEALKNLRHQHICQLYHVLE--TANKIFMVLEYCPGGELFDYI--ISQ 102
Query: 377 DPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTE 436
D L + + Y+H Y HRD+K N+L D+ K+ DFGL +
Sbjct: 103 DRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGD-VSPKVDVYAFGVVLYELISAKEAIVKGNGSSAD 495
G+ Y PE Q + + DV++ G++LY L+ D
Sbjct: 160 GNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF--------D 211
Query: 496 SKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSMR 555
++AL+++++ D+ K + P S+L + Q+ +V P+ R SM+
Sbjct: 212 DDNVMALYKKIMR---GKYDVPKWLSP--------SSILLLQQMLQV----DPKKRISMK 256
Query: 556 SIV 558
+++
Sbjct: 257 NLL 259
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELK 333
+ + ++G+G F V ++ G Y +++I KK+ + ++ E +
Sbjct: 24 YQLFEELGKGAFSVVRRC-VKVLAGQEYAAKII---------NTKKLSARDHQKLEREAR 73
Query: 334 VLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRG----SGRDPLPWSSRVQIA 388
+ + H N+VRL EG +L+++ + G L E + S D S +Q
Sbjct: 74 ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADA---SHCIQQI 130
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGSASLPTR 445
L++ +H H + V +HRD+K N+L+ K K+ADFGL E G
Sbjct: 131 LEAV-----LHCHQMGV-VHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFG 183
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
GT GY+ PE + VD++A GV+LY L+
Sbjct: 184 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILL 218
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 28/221 (12%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASRE 327
++ T+ + + ++G+G F V ++ G Y + +I KK+ + ++
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRC-VKVLAGQEYAAMII---------NTKKLSARDHQK 56
Query: 328 FLAELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRG----SGRDPLPWS 382
E ++ + H N+VRL EG +L+++ + G L E + S D S
Sbjct: 57 LEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADA---S 113
Query: 383 SRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILID---KNFHAKVADFGLTKLTEVGS 439
+Q L++ +H H + V +HR++K N+L+ K K+ADFGL E G
Sbjct: 114 HCIQQILEAV-----LHCHQMGV-VHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-GE 166
Query: 440 ASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
GT GY+ PE + VD++A GV+LY L+
Sbjct: 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILL 207
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + + ++G G FG V+ + G ++++ I + K +K E
Sbjct: 51 DYYDILEELGSGAFGVVHRC-VEKATGRVFVAKFINTPYPLDKYTVKN-----------E 98
Query: 332 LKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
+ ++ +HH L+ L + + + L+ E++ G L + + + + +
Sbjct: 99 ISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQ 157
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILID--KNFHAKVADFGLTKLTEVGSASLPTRLVG 448
+ GL+++HEH++ +H DIK NI+ + K K+ DFGL T++ +
Sbjct: 158 ACEGLKHMHEHSI---VHLDIKPENIMCETKKASSVKIIDFGLA--TKLNPDEIVKVTTA 212
Query: 449 TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
T + PE V D++A GV+ Y L+S
Sbjct: 213 TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
+G G F V+ + R +L + + + A + ++ E+ VL +
Sbjct: 17 LGSGAFSEVFLVKQR------LTGKLFALKCIKKSPAFRDSSLEN------EIAVLKKIK 64
Query: 340 HLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYI 398
H N+V L Y +LV + + G L + + G +S V + SA ++Y+
Sbjct: 65 HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSA--VKYL 122
Query: 399 HEHTVPVYIHRDIKSANILI---DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPP 455
HE+ + +HRD+K N+L ++N + DFGL+K+ + G S GT GY+ P
Sbjct: 123 HENGI---VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA---CGTPGYVAP 176
Query: 456 EYAQYGDVSPKVDVYAFGVVLYELI 480
E S VD ++ GV+ Y L+
Sbjct: 177 EVLAQKPYSKAVDCWSIGVITYILL 201
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 14/213 (6%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+ +S +G G FG V+ A + E + + I +++ I+ D + + L
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTA-VDKEKNKEVVVKFIKKEKVLEDCWIE--DPKLGKVTL- 78
Query: 331 ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENG-NLSEHLRGSGRDPLPWSSRVQIA 388
E+ +L+ V H N+++++ + +G LV E +G +L + R P +S +
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVG 448
L SA G Y+ + IHRDIK NI+I ++F K+ DFG E G L G
Sbjct: 139 LVSAVG--YLRLKDI---IHRDIKDENIVIAEDFTIKLIDFGSAAYLERG--KLFYTFCG 191
Query: 449 TFGYMPPEYAQYGDV-SPKVDVYAFGVVLYELI 480
T Y PE P++++++ GV LY L+
Sbjct: 192 TIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 30/187 (16%)
Query: 313 QKAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 48 HRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFN 100
Query: 367 ---LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANIL 417
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+
Sbjct: 101 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLA 157
Query: 418 IDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVL 476
++++ K+ DFGL + T+ A V T Y PE + + VD+++ G ++
Sbjct: 158 VNEDCELKILDFGLARHTDDEMAG----FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 477 YELISAK 483
EL++ +
Sbjct: 214 AELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 30/187 (16%)
Query: 313 QKAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 48 HRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFN 100
Query: 367 ---LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANIL 417
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+
Sbjct: 101 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLA 157
Query: 418 IDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVL 476
++++ K+ DFGL + T+ A V T Y PE + + VD+++ G ++
Sbjct: 158 VNEDCELKILDFGLARHTDDEMAG----FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 477 YELISAK 483
EL++ +
Sbjct: 214 AELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 30/187 (16%)
Query: 313 QKAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 44 HRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFN 96
Query: 367 ---LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANIL 417
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+
Sbjct: 97 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLA 153
Query: 418 IDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVL 476
++++ K+ DFGL + T+ A V T Y PE + + VD+++ G ++
Sbjct: 154 VNEDCELKILDFGLARHTDDEMAG----FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 209
Query: 477 YELISAK 483
EL++ +
Sbjct: 210 AELLTGR 216
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 30/226 (13%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR- 326
K D + + ++G G F V + G Y ++ I KK +ASR
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFI-----------KKRQSRASRR 55
Query: 327 -----EFLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLP 380
E E+ +L V H N++ L Y + L+ E + G L + L + ++ L
Sbjct: 56 GVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLS 113
Query: 381 WSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTE 436
G+ Y+H + H D+K NI L+DKN H K+ DFGL E
Sbjct: 114 EEEATSFIKQILDGVNYLHTKKIA---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
G + GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 171 DGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 316 AIKKMDMQASRE----FLAELKVLTHVHHLN-LVRLIG-YCVEGSLFLVYEYIENGNLSE 369
A+K+M ++E L +L V+ H +V+ G + +F+ E + G +E
Sbjct: 54 AVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAE 111
Query: 370 HLRGSGRDPLPWSSRVQIALDSARGLEYIHE-HTVPVYIHRDIKSANILIDKNFHAKVAD 428
L+ + P+P ++ + + L Y+ E H V IHRD+K +NIL+D+ K+ D
Sbjct: 112 KLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGV---IHRDVKPSNILLDERGQIKLCD 168
Query: 429 FGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSP-----KVDVYAFGVVLYELISAK 483
FG++ A R G YM PE D + + DV++ G+ L EL + +
Sbjct: 169 FGISGRLVDDKAK--DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 91/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + S + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 159 NEDSELKILDFGLCRHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 56 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 108
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 109 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 165
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T A T V T Y PE + + VD+++ G ++
Sbjct: 166 NEDCELKILDFGLARHT----ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 478 ELISAK 483
EL++ +
Sbjct: 222 ELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 56 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 108
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 109 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 165
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T A T V T Y PE + + VD+++ G ++
Sbjct: 166 NEDCELKILDFGLARHT----ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 478 ELISAK 483
EL++ +
Sbjct: 222 ELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 56 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 108
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 109 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 165
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T A T V T Y PE + + VD+++ G ++
Sbjct: 166 NEDCELKILDFGLARHT----ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 478 ELISAK 483
EL++ +
Sbjct: 222 ELLTGR 227
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 30/226 (13%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR- 326
K D + + ++G G F V + G Y ++ I KK +ASR
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFI-----------KKRQSRASRR 55
Query: 327 -----EFLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLP 380
E E+ +L V H N++ L Y + L+ E + G L + L + ++ L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLS 113
Query: 381 WSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTE 436
G+ Y+H + H D+K NI L+DKN H K+ DFGL E
Sbjct: 114 EEEATSFIKQILDGVNYLHTKKIA---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
G + GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 171 DGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 30/226 (13%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR- 326
K D + + ++G G F V + G Y ++ I KK +ASR
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFI-----------KKRQSRASRR 55
Query: 327 -----EFLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLP 380
E E+ +L V H N++ L Y + L+ E + G L + L + ++ L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLS 113
Query: 381 WSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTE 436
G+ Y+H + H D+K NI L+DKN H K+ DFGL E
Sbjct: 114 EEEATSFIKQILDGVNYLHTKKIA---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
G + GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 171 DGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 295 GEYGNSYLSRLICVNLLMQKAAIKKMDMQASR--EFLAELKVLTHVHHLNLVRLIGYCVE 352
G YG L R ++ I+K + S + L E+ VL + H N+++L + +
Sbjct: 48 GAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED 107
Query: 353 G-SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDI 411
+ +LV E + G L + + R I G+ Y+H+H + +HRD+
Sbjct: 108 KRNYYLVMECYKGGELFDEI--IHRMKFNEVDAAVIIKQVLSGVTYLHKHNI---VHRDL 162
Query: 412 KSANILI---DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVD 468
K N+L+ +K+ K+ DFGL+ + E + RL GT Y+ PE + K D
Sbjct: 163 KPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKERL-GTAYYIAPEVLR-KKYDEKCD 219
Query: 469 VYAFGVVLYELISA 482
V++ GV+L+ L++
Sbjct: 220 VWSIGVILFILLAG 233
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 44/226 (19%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA-----ELKV 334
+G G +GAV A + G G K AIKK+ E A EL++
Sbjct: 33 VGSGAYGAVCSA-VDGRTG--------------AKVAIKKLYRPFQSELFAKRAYRELRL 77
Query: 335 LTHVHHLNLVRLIGYCVEGS-------LFLVYEYI--ENGNLSEHLRGSGRDPLPWSSRV 385
L H+ H N++ L+ +LV ++ + G L +H + G D R+
Sbjct: 78 LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK-LGED------RI 130
Query: 386 Q-IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPT 444
Q + +GL YIH + IHRD+K N+ ++++ K+ DFGL + + + +
Sbjct: 131 QFLVYQMLKGLRYIHAAGI---IHRDLKPGNLAVNEDCELKILDFGLARQAD---SEMXG 184
Query: 445 RLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+V + P + + VD+++ G ++ E+I+ K + KG+
Sbjct: 185 XVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK-TLFKGS 229
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 95/222 (42%), Gaps = 40/222 (18%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+D + + IG G FG +R + N L+ V + + +K+D RE +
Sbjct: 17 SDRYELVKDIGSGNFGVARL--MRDKQSNE----LVAVKYIERG---EKIDENVKREIIN 67
Query: 331 ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
+ H N+VR + + L +V EY G L E + +GR +
Sbjct: 68 HRSL----RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----------FSE 113
Query: 390 DSAR--------GLEYIHEHTVPVYIHRDIKSANILIDKN--FHAKVADFGLTKLTEVGS 439
D AR G+ Y H V HRD+K N L+D + K+ DFG +K + + S
Sbjct: 114 DEARFFFQQLISGVSYCHAMQV---CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 170
Query: 440 ASLPTRLVGTFGYMPPEYAQYGDVSPKV-DVYAFGVVLYELI 480
P VGT Y+ PE + KV DV++ GV LY ++
Sbjct: 171 Q--PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 210
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 30/226 (13%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR- 326
K D + + ++G G F V + G Y ++ I KK +ASR
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFI-----------KKRQSRASRR 55
Query: 327 -----EFLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLP 380
E E+ +L V H N++ L Y + L+ E + G L + L + ++ L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLS 113
Query: 381 WSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTE 436
G+ Y+H + H D+K NI L+DKN H K+ DFGL E
Sbjct: 114 EEEATSFIKQILDGVNYLHTKKIA---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
G + GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 171 DGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 30/226 (13%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR- 326
K D + + ++G G F V + G Y ++ I KK +ASR
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFI-----------KKRQSRASRR 55
Query: 327 -----EFLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLP 380
E E+ +L V H N++ L Y + L+ E + G L + L + ++ L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLS 113
Query: 381 WSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTE 436
G+ Y+H + H D+K NI L+DKN H K+ DFGL E
Sbjct: 114 EEEATSFIKQILDGVNYLHTKKIA---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
G + GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 171 DGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 30/226 (13%)
Query: 268 SKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASR- 326
K D + + ++G G F V + G Y ++ I KK +ASR
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKS-TGLEYAAKFI-----------KKRQSRASRR 55
Query: 327 -----EFLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLP 380
E E+ +L V H N++ L Y + L+ E + G L + L + ++ L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLS 113
Query: 381 WSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTE 436
G+ Y+H + H D+K NI L+DKN H K+ DFGL E
Sbjct: 114 EEEATSFIKQILDGVNYLHTKKIA---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 437 VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
G + GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 171 DGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 54 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 106
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 107 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 163
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 164 NEDXELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 478 ELISAK 483
EL++ +
Sbjct: 220 ELLTGR 225
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 30/187 (16%)
Query: 313 QKAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 44 HRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFN 96
Query: 367 ---LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANIL 417
L HL G+ + + ++ VQ + RGL+YIH + IHRD+K +N+
Sbjct: 97 DVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLA 153
Query: 418 IDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVL 476
++++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 154 VNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 209
Query: 477 YELISAK 483
EL++ +
Sbjct: 210 AELLTGR 216
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 24/183 (13%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNL 367
K A+KK+ + A R + EL++L H+ H N++ L+ + E + L
Sbjct: 78 KIAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPATSL---EEFNDVYL 133
Query: 368 SEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILIDKN 421
HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ ++++
Sbjct: 134 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAVNED 190
Query: 422 FHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLYELI 480
K+ DFGL + T+ T V T Y PE + + VD+++ G ++ EL+
Sbjct: 191 CELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELL 246
Query: 481 SAK 483
+ +
Sbjct: 247 TGR 249
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 29/193 (15%)
Query: 313 QKAAIKKM---DMQASREFLAELKVLTHVHHLNLVRL--------------IGYCVE-GS 354
++ AIKK+ D Q+ + L E+K++ + H N+V++ +G E S
Sbjct: 37 KRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNS 96
Query: 355 LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSA 414
+++V EY+E +L+ L + PL RGL+YIH V +HRD+K A
Sbjct: 97 VYIVQEYMET-DLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSANV---LHRDLKPA 149
Query: 415 NILID-KNFHAKVADFGLTKLTE---VGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVY 470
N+ I+ ++ K+ DFGL ++ + L LV + P + + +D++
Sbjct: 150 NLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMW 209
Query: 471 AFGVVLYELISAK 483
A G + E+++ K
Sbjct: 210 AAGCIFAEMLTGK 222
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 54 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 106
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 107 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 163
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 164 NEDXELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 478 ELISAK 483
EL++ +
Sbjct: 220 ELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 60 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 112
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 113 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 169
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 170 NEDXELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 225
Query: 478 ELISAK 483
EL++ +
Sbjct: 226 ELLTGR 231
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 159 NEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 159 NEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 159 NEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 61 RVAVKKLSKPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 113
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 114 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 170
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 171 NEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 478 ELISAK 483
EL++ +
Sbjct: 227 ELLTGR 232
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 159 NEDCELKILDFGLARHTDDEM----TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 159 NEDXELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 159 NEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 61 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 113
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 114 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 170
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 171 NEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 478 ELISAK 483
EL++ +
Sbjct: 227 ELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 51 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 103
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 104 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 160
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 161 NEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 478 ELISAK 483
EL++ +
Sbjct: 217 ELLTGR 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 61 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 113
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 114 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 170
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 171 NEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 478 ELISAK 483
EL++ +
Sbjct: 227 ELLTGR 232
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 159 NEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 47 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 99
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 100 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 156
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 157 NEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 212
Query: 478 ELISAK 483
EL++ +
Sbjct: 213 ELLTGR 218
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF 450
+ +G++Y+H + V IHRD+K N+ ++ + K+ DFGL E T L GT
Sbjct: 151 TIQGVQYLHNNRV---IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTP 206
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
Y+ PE S +VD+++ G +LY L+ K
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 51 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 103
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 104 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 160
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 161 NEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 478 ELISAK 483
EL++ +
Sbjct: 217 ELLTGR 222
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 30/187 (16%)
Query: 313 QKAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 44 HRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFN 96
Query: 367 ---LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANIL 417
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+
Sbjct: 97 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLA 153
Query: 418 IDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVL 476
++++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 154 VNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 209
Query: 477 YELISAK 483
EL++ +
Sbjct: 210 AELLTGR 216
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 56 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 108
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 109 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 165
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 166 NEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 478 ELISAK 483
EL++ +
Sbjct: 222 ELLTGR 227
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 9/191 (4%)
Query: 295 GEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLI-GYCVEG 353
G +G + L + IK M+ E E+ V+ + H NL++L + +
Sbjct: 100 GRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN 159
Query: 354 SLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKS 413
+ LV EY++ G L + + + L + G+ ++H+ + +H D+K
Sbjct: 160 DIVLVMEYVDGGELFDRIIDESYN-LTELDTILFMKQICEGIRHMHQMYI---LHLDLKP 215
Query: 414 ANIL-IDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYA 471
NIL ++++ K+ DFGL + + L GT ++ PE Y VS D+++
Sbjct: 216 ENILCVNRDAKQIKIIDFGLARRYK-PREKLKVNF-GTPEFLAPEVVNYDFVSFPTDMWS 273
Query: 472 FGVVLYELISA 482
GV+ Y L+S
Sbjct: 274 VGVIAYMLLSG 284
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 45 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 97
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 98 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 154
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 155 NEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 478 ELISAK 483
EL++ +
Sbjct: 211 ELLTGR 216
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 159 NEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 54 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 106
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 107 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 163
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 164 NEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 478 ELISAK 483
EL++ +
Sbjct: 220 ELLTGR 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 60 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 112
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 113 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 169
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 170 NEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 225
Query: 478 ELISAK 483
EL++ +
Sbjct: 226 ELLTGR 231
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 48 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 100
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 101 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 157
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 158 NEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 213
Query: 478 ELISAK 483
EL++ +
Sbjct: 214 ELLTGR 219
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 30/187 (16%)
Query: 313 QKAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 48 HRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFN 100
Query: 367 ---LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANIL 417
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+
Sbjct: 101 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLA 157
Query: 418 IDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVL 476
++++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 158 VNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 477 YELISAK 483
EL++ +
Sbjct: 214 AELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 30/187 (16%)
Query: 313 QKAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 68 HRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFN 120
Query: 367 ---LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANIL 417
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+
Sbjct: 121 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLA 177
Query: 418 IDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVL 476
++++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 178 VNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 233
Query: 477 YELISAK 483
EL++ +
Sbjct: 234 AELLTGR 240
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 30/187 (16%)
Query: 313 QKAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 58 HRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFN 110
Query: 367 ---LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANIL 417
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+
Sbjct: 111 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLA 167
Query: 418 IDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVL 476
++++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 168 VNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 223
Query: 477 YELISAK 483
EL++ +
Sbjct: 224 AELLTGR 230
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 46 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 98
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 99 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 155
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 156 NEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 211
Query: 478 ELISAK 483
EL++ +
Sbjct: 212 ELLTGR 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 46 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 98
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 99 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 155
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 156 NEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 211
Query: 478 ELISAK 483
EL++ +
Sbjct: 212 ELLTGR 217
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 72 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 124
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 125 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 181
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 182 NEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 237
Query: 478 ELISAK 483
EL++ +
Sbjct: 238 ELLTGR 243
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 159 NEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 159 NEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 68 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 120
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 121 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 177
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 178 NEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 233
Query: 478 ELISAK 483
EL++ +
Sbjct: 234 ELLTGR 239
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 54 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 106
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 107 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 163
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 164 NEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 478 ELISAK 483
EL++ +
Sbjct: 220 ELLTGR 225
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 30/187 (16%)
Query: 313 QKAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 67 HRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFN 119
Query: 367 ---LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANIL 417
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+
Sbjct: 120 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLA 176
Query: 418 IDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVL 476
++++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 177 VNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 232
Query: 477 YELISAK 483
EL++ +
Sbjct: 233 AELLTGR 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 69 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 121
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 122 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 178
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 179 NEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 478 ELISAK 483
EL++ +
Sbjct: 235 ELLTGR 240
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 294 RGEYGNSYLSRLICVNLLMQKA-----AIKKM----DMQASREFLAELKVLTHVHHLN-L 343
RG YG+ VN ++ K A+K++ D + ++ L +L V+ +
Sbjct: 32 RGAYGS--------VNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYI 83
Query: 344 VRLIGYCV-EGSLFLVYEYIENG--NLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHE 400
V+ G EG ++ E + +++ D +P +I L + + L ++ E
Sbjct: 84 VQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE 143
Query: 401 HTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY--- 457
+ IHRDIK +NIL+D++ + K+ DFG++ ++ + TR G YM PE
Sbjct: 144 NLK--IIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVDSIAKTRDAGCRPYMAPERIDP 199
Query: 458 -AQYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
A + DV++ G+ LYEL + + K N
Sbjct: 200 SASRQGYDVRSDVWSLGITLYELATGRFPYPKWN 233
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 55 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 107
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 108 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 164
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 165 NEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 478 ELISAK 483
EL++ +
Sbjct: 221 ELLTGR 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 51 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 103
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 104 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 160
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 161 NEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 478 ELISAK 483
EL++ +
Sbjct: 217 ELLTGR 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 51 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 103
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 104 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 160
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 161 NEDSELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 478 ELISAK 483
EL++ +
Sbjct: 217 ELLTGR 222
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMD-----MQASREFLAELKV 334
+G G +G+V ++Y +RL QK A+KK+ + +R EL++
Sbjct: 36 VGSGAYGSV---------CSAYDARL------RQKVAVKKLSRPFQSLIHARRTYRELRL 80
Query: 335 LTHVHHLNLVRLIGYCVEGSLFLVYE--YIENGNLSEHLRGSGRDPLPWSSRVQ-IALDS 391
L H+ H N++ L+ + + Y+ + L + VQ +
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQL 140
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFG 451
RGL+YIH + IHRD+K +N+ ++++ ++ DFGL + + T V T
Sbjct: 141 LRGLKYIHSAGI---IHRDLKPSNVAVNEDSELRILDFGLARQADEEM----TGYVATRW 193
Query: 452 YMPPEYA-QYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLP 510
Y PE + + VD+++ G ++ EL+ K A+ G+ K ++ EV+ P
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK-ALFPGSDYIDQLKRIM----EVVGTP 248
Query: 511 DP 512
P
Sbjct: 249 SP 250
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 55 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 107
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 108 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 164
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 165 NEDSELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 478 ELISAK 483
EL++ +
Sbjct: 221 ELLTGR 226
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMD-----MQASREFLAELKV 334
+G G +G+V ++Y +RL QK A+KK+ + +R EL++
Sbjct: 28 VGSGAYGSV---------CSAYDARL------RQKVAVKKLSRPFQSLIHARRTYRELRL 72
Query: 335 LTHVHHLNLVRLIGYCVEGSLFLVYE--YIENGNLSEHLRGSGRDPLPWSSRVQ-IALDS 391
L H+ H N++ L+ + + Y+ + L + VQ +
Sbjct: 73 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL 132
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFG 451
RGL+YIH + IHRD+K +N+ ++++ ++ DFGL + + T V T
Sbjct: 133 LRGLKYIHSAGI---IHRDLKPSNVAVNEDCELRILDFGLARQADEEM----TGYVATRW 185
Query: 452 YMPPEYA-QYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLP 510
Y PE + + VD+++ G ++ EL+ K A+ G+ K ++ EV+ P
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK-ALFPGSDYIDQLKRIM----EVVGTP 240
Query: 511 DP 512
P
Sbjct: 241 SP 242
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 263 SYEELSKATDN---FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKK 319
YE + + D + + ++G G FG VY A+ N L ++ K+
Sbjct: 7 EYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAK------NKETGALAAAKVIETKSE--- 57
Query: 320 MDMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDP 378
+ +++ E+++L H +V+L+G Y +G L+++ E+ G + + R
Sbjct: 58 ---EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGL 114
Query: 379 LPWSSRVQIALDSA-RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV 437
++Q+ L ++H + IHRD+K+ N+L+ ++ADFG++ +
Sbjct: 115 T--EPQIQVVCRQMLEALNFLHSKRI---IHRDLKAGNVLMTLEGDIRLADFGVSA-KNL 168
Query: 438 GSASLPTRLVGTFGYMPPEYAQYGDVSP-----KVDVYAFGVVLYEL 479
+ +GT +M PE + K D+++ G+ L E+
Sbjct: 169 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 113/274 (41%), Gaps = 49/274 (17%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELR--GEYGNSYLSRLICVNLLMQKAAIKKMDMQASREF 328
+ +F + +G+G +G V A + GE AIKK++ F
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEI-----------------VAIKKIEPFDKPLF 52
Query: 329 ----LAELKVLTHVHHLNLVRLIGYCVEGSLFLVYE-YIENGNLSEHLRGSGRDPLPWSS 383
L E+K+L H H N++ + S E YI + L +
Sbjct: 53 ALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDD 112
Query: 384 RVQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSA-- 440
+Q + + R ++ +H V IHRD+K +N+LI+ N KV DFGL ++ + +A
Sbjct: 113 HIQYFIYQTLRAVKVLHGSNV---IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 441 SLPT-------RLVGTFGYMPPEY----AQYGDVSPKVDVYAFGVVLYELISAKEAIVKG 489
S PT V T Y PE A+Y S +DV++ G +L EL + I G
Sbjct: 170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKY---SRAMDVWSCGCILAELF-LRRPIFPG 225
Query: 490 NGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPR 523
D + + L ++ P DLR + PR
Sbjct: 226 R----DYRHQLLLIFGIIGTPHSDNDLRCIESPR 255
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 111/274 (40%), Gaps = 49/274 (17%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELR--GEYGNSYLSRLICVNLLMQKAAIKKMDMQASREF 328
+ +F + +G+G +G V A + GE AIKK++ F
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEI-----------------VAIKKIEPFDKPLF 52
Query: 329 ----LAELKVLTHVHHLNLVRLIGYCVEGSLFLVYE-YIENGNLSEHLRGSGRDPLPWSS 383
L E+K+L H H N++ + S E YI + L +
Sbjct: 53 ALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDD 112
Query: 384 RVQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTE------ 436
+Q + + R ++ +H V IHRD+K +N+LI+ N KV DFGL ++ +
Sbjct: 113 HIQYFIYQTLRAVKVLHGSNV---IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 437 ---VGSASLPTRLVGTFGYMPPEY----AQYGDVSPKVDVYAFGVVLYELISAKEAIVKG 489
G S T V T Y PE A+Y S +DV++ G +L EL + I G
Sbjct: 170 SEPTGQQSGMTEXVATRWYRAPEVMLTSAKY---SRAMDVWSCGCILAELF-LRRPIFPG 225
Query: 490 NGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPR 523
D + + L ++ P DLR + PR
Sbjct: 226 R----DYRHQLLLIFGIIGTPHSDNDLRCIESPR 255
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
++G G FG VY A+ N L ++ K+ + +++ E+++L
Sbjct: 18 ELGDGAFGKVYKAK------NKETGALAAAKVIETKSE------EELEDYIVEIEILATC 65
Query: 339 HHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSA-RGLE 396
H +V+L+G Y +G L+++ E+ G + + R ++Q+ L
Sbjct: 66 DHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT--EPQIQVVCRQMLEALN 123
Query: 397 YIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPE 456
++H + IHRD+K+ N+L+ ++ADFG++ + + +GT +M PE
Sbjct: 124 FLHSKRI---IHRDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPE 179
Query: 457 YAQYGDVSP-----KVDVYAFGVVLYEL 479
+ K D+++ G+ L E+
Sbjct: 180 VVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 111/274 (40%), Gaps = 49/274 (17%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELR--GEYGNSYLSRLICVNLLMQKAAIKKMDMQASREF 328
+ +F + +G+G +G V A + GE AIKK++ F
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEI-----------------VAIKKIEPFDKPLF 52
Query: 329 ----LAELKVLTHVHHLNLVRLIGYCVEGSLFLVYE-YIENGNLSEHLRGSGRDPLPWSS 383
L E+K+L H H N++ + S E YI + L +
Sbjct: 53 ALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDD 112
Query: 384 RVQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTE------ 436
+Q + + R ++ +H V IHRD+K +N+LI+ N KV DFGL ++ +
Sbjct: 113 HIQYFIYQTLRAVKVLHGSNV---IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 437 ---VGSASLPTRLVGTFGYMPPEY----AQYGDVSPKVDVYAFGVVLYELISAKEAIVKG 489
G S T V T Y PE A+Y S +DV++ G +L EL + I G
Sbjct: 170 SEPTGQQSGMTEYVATRWYRAPEVMLTSAKY---SRAMDVWSCGCILAELF-LRRPIFPG 225
Query: 490 NGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPR 523
D + + L ++ P DLR + PR
Sbjct: 226 R----DYRHQLLLIFGIIGTPHSDNDLRCIESPR 255
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 55 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 107
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 108 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 164
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 165 NEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 478 ELISAK 483
EL++ +
Sbjct: 221 ELLTGR 226
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 385 VQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL-----------TK 433
+ I + A +E++H + +HRD+K +NI + KV DFGL T
Sbjct: 167 LHIFIQIAEAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 434 LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELI 480
LT + + + VGT YM PE + S KVD+++ G++L+EL+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 72 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 124
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 125 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 181
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ V T Y PE + + VD+++ G ++
Sbjct: 182 NEDCELKILDFGLARHTDDEMXG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 237
Query: 478 ELISAK 483
EL++ +
Sbjct: 238 ELLTGR 243
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 30/187 (16%)
Query: 313 QKAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 54 HRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFN 106
Query: 367 ---LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANIL 417
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+
Sbjct: 107 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLA 163
Query: 418 IDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVL 476
++++ K+ DFGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 164 VNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 219
Query: 477 YELISAK 483
EL++ +
Sbjct: 220 AELLTGR 226
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 44/202 (21%)
Query: 315 AAIKKMDMQASREFLAELKVLTHVH-HLNLVRLIGYCVEGSLFLVY-----------EYI 362
A+K+M + L E+K+LT H N++R YC E + +Y + +
Sbjct: 42 VAVKRMLIDFCDIALMEIKLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLV 99
Query: 363 ENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILID--- 419
E+ N+S+ ++ P S QIA G+ ++H + IHRD+K NIL+
Sbjct: 100 ESKNVSDENLKLQKEYNPISLLRQIA----SGVAHLHSLKI---IHRDLKPQNILVSTSS 152
Query: 420 ----------KNFHAKVADFGLTKLTEVGSASLPTRL---VGTFGYMPPEYAQYGD---- 462
+N ++DFGL K + G +S T L GT G+ PE + +
Sbjct: 153 RFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQT 212
Query: 463 ---VSPKVDVYAFGVVLYELIS 481
++ +D+++ G V Y ++S
Sbjct: 213 KRRLTRSIDIFSMGCVFYYILS 234
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 30/187 (16%)
Query: 313 QKAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 68 HRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFN 120
Query: 367 ---LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANIL 417
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+
Sbjct: 121 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLA 177
Query: 418 IDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVL 476
++++ K+ DFGL + T+ V T Y PE + + VD+++ G ++
Sbjct: 178 VNEDCELKILDFGLARHTDDEMXG----XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 233
Query: 477 YELISAK 483
EL++ +
Sbjct: 234 AELLTGR 240
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 89/227 (39%), Gaps = 16/227 (7%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+F ++G G +G V+ + E G Y + K +K+ S E + +
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSK-EDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQ 115
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
H VRL EG + + + +L +H G LP + D+
Sbjct: 116 --------HPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGAS-LPEAQVWGYLRDT 166
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFG 451
L ++H + +H D+K ANI + K+ DFGL L E+G+A G
Sbjct: 167 LLALAHLHSQGL---VHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPR 221
Query: 452 YMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKG 498
YM PE Q G DV++ G+ + E+ E G G +G
Sbjct: 222 YMAPELLQ-GSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQG 267
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 98/250 (39%), Gaps = 45/250 (18%)
Query: 265 EELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQA 324
+E + + IG+G FG VY+ GE AI+ +D++
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE------------------VAIRLIDIER 67
Query: 325 SRE-----FLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPL 379
E F E+ H N+V +G C+ + + G + + L
Sbjct: 68 DNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVL 127
Query: 380 PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLT---E 436
+ QIA + +G+ Y+H + +H+D+KS N+ D N + DFGL ++ +
Sbjct: 128 DVNKTRQIAQEIVKGMGYLHAKGI---LHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183
Query: 437 VGSASLPTRLV-GTFGYMPPEYAQYGDVSPKV-----------DVYAFGVVLYELISAKE 484
G R+ G ++ PE + +SP DV+A G + YEL A+E
Sbjct: 184 AGRREDKLRIQNGWLCHLAPEIIR--QLSPDTEEDKLPFSKHSDVFALGTIWYEL-HARE 240
Query: 485 AIVKGNGSSA 494
K + A
Sbjct: 241 WPFKTQPAEA 250
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 120/288 (41%), Gaps = 55/288 (19%)
Query: 238 VESTGPAAGTPTSLNAITVDKSVEFSYEELSKAT----DNFSMSHKIGQGGFGAVYYAEL 293
+E +GP AG F +EL+K +G G +G+V
Sbjct: 5 LEMSGPRAG---------------FYRQELNKTVWEVPQRLQGLRPVGSGAYGSV----- 44
Query: 294 RGEYGNSYLSRLICVNLLMQKAAIKKMD-----MQASREFLAELKVLTHVHHLNLVRLIG 348
++Y +RL QK A+KK+ + +R EL++L H+ H N++ L+
Sbjct: 45 ----CSAYDARL------RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 349 YCVEGSLFLVYE--YIENGNLSEHLRGSGRDPLPWSSRVQ-IALDSARGLEYIHEHTVPV 405
+ + Y+ + L + VQ + RGL+YIH +
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI-- 152
Query: 406 YIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVS 464
IHRD+K +N+ ++++ ++ DFGL + + T V T Y PE + +
Sbjct: 153 -IHRDLKPSNVAVNEDSELRILDFGLARQADEEM----TGYVATRWYRAPEIMLNWMHYN 207
Query: 465 PKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDP 512
VD+++ G ++ EL+ K A+ G+ K ++ EV+ P P
Sbjct: 208 QTVDIWSVGCIMAELLQGK-ALFPGSDYIDQLKRIM----EVVGTPSP 250
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF 450
+ +G++Y+H + V IHRD+K N+ ++ + K+ DFGL E L GT
Sbjct: 135 TIQGVQYLHNNRV---IHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKDLCGTP 190
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
Y+ PE S +VD+++ G +LY L+ K
Sbjct: 191 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ D+GL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 159 NEDCELKILDYGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF 450
+ +G++Y+H + V IHRD+K N+ ++ + K+ DFGL E L GT
Sbjct: 151 TIQGVQYLHNNRV---IHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKXLCGTP 206
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
Y+ PE S +VD+++ G +LY L+ K
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 94/222 (42%), Gaps = 40/222 (18%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+D + + IG G FG +R + N L+ V + + +K+ RE +
Sbjct: 18 SDRYELVKDIGSGNFGVARL--MRDKQSNE----LVAVKYIERG---EKIAANVKREIIN 68
Query: 331 ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
+ H N+VR + + L +V EY G L E + +GR +
Sbjct: 69 HRSL----RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----------FSE 114
Query: 390 DSAR--------GLEYIHEHTVPVYIHRDIKSANILIDKN--FHAKVADFGLTKLTEVGS 439
D AR G+ Y H V HRD+K N L+D + K+ DFG +K + + S
Sbjct: 115 DEARFFFQQLISGVSYCHAMQV---CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 171
Query: 440 ASLPTRLVGTFGYMPPEYAQYGDVSPKV-DVYAFGVVLYELI 480
P VGT Y+ PE + KV DV++ GV LY ++
Sbjct: 172 Q--PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTF 450
+ +G++Y+H + V IHRD+K N+ ++ + K+ DFGL E L GT
Sbjct: 151 TIQGVQYLHNNRV---IHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKDLCGTP 206
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
Y+ PE S +VD+++ G +LY L+ K
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYG-DVSPKVDVYAFGVVLY 477
+++ K+ DFGL + T+ T V T Y PE + VD+++ G ++
Sbjct: 159 NEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 318 KKMDMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGR 376
K+M+ +E A LK+ H N+V+L + + FLV E + G L E ++
Sbjct: 46 KRMEANTQKEITA-LKLCEG--HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKH 102
Query: 377 DPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILI---DKNFHAKVADFGLTK 433
+S + L SA H H V V +HRD+K N+L + N K+ DFG +
Sbjct: 103 FSETEASYIMRKLVSAVS----HMHDVGV-VHRDLKPENLLFTDENDNLEIKIIDFGFAR 157
Query: 434 LTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAK 483
L + L T T Y PE D+++ GV+LY ++S +
Sbjct: 158 LKPPDNQPLKTPCF-TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 94/222 (42%), Gaps = 40/222 (18%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+D + + IG G FG +R + N L+ V + + +K+D RE +
Sbjct: 18 SDRYELVKDIGSGNFGVARL--MRDKQSNE----LVAVKYIERG---EKIDENVKREIIN 68
Query: 331 ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
+ H N+VR + + L +V EY G L E + +GR +
Sbjct: 69 HRSL----RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----------FSE 114
Query: 390 DSAR--------GLEYIHEHTVPVYIHRDIKSANILIDKN--FHAKVADFGLTKLTEVGS 439
D AR G+ Y H V HRD+K N L+D + K+ FG +K + + S
Sbjct: 115 DEARFFFQQLISGVSYCHAMQV---CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHS 171
Query: 440 ASLPTRLVGTFGYMPPEYAQYGDVSPKV-DVYAFGVVLYELI 480
P VGT Y+ PE + KV DV++ GV LY ++
Sbjct: 172 Q--PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 20/216 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA- 330
D + ++G G F V + G Y ++ I +K K SRE +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKST-GLQYAAKFI------KKRRTKSSRRGVSREDIER 63
Query: 331 ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ +L + H N++ L Y + + L+ E + G L + L + ++ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTEVGSASLPTR 445
G+ Y+H + H D+K NI L+D+N K+ DFGL + G+
Sbjct: 122 QILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN 176
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
+ GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 177 IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 94/222 (42%), Gaps = 40/222 (18%)
Query: 271 TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+D + + IG G FG +R + N L+ V + + +K+D RE +
Sbjct: 18 SDRYELVKDIGSGNFGVARL--MRDKQSNE----LVAVKYIERG---EKIDENVKREIIN 68
Query: 331 ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
+ H N+VR + + L +V EY G L E + +GR +
Sbjct: 69 HRSL----RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR----------FSE 114
Query: 390 DSAR--------GLEYIHEHTVPVYIHRDIKSANILIDKN--FHAKVADFGLTKLTEVGS 439
D AR G+ Y H V HRD+K N L+D + K+ FG +K + + S
Sbjct: 115 DEARFFFQQLISGVSYCHAMQV---CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHS 171
Query: 440 ASLPTRLVGTFGYMPPEYAQYGDVSPKV-DVYAFGVVLYELI 480
P VGT Y+ PE + KV DV++ GV LY ++
Sbjct: 172 Q--PKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE L+ + ++Q A K
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE--------LVAIKKVLQGKAFKNR---------- 62
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 121
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 179 NV--SYICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 217
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE L+ + ++Q A K
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE--------LVAIKKVLQGKAFKNR---------- 62
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 121
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 179 NV--SYICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 269 KATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREF 328
K DN+ + H IG+G +G VY A + N + + VN + + D+ +
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKK---VNRMFE-------DLIDCKRI 74
Query: 329 LAELKVLTHVHHLNLVRLIGYCVEGSLFLVYE-YIENGNLSEHLRGSGRDPLPWSSR--V 385
L E+ +L + ++RL + L E YI L+ + P+ + +
Sbjct: 75 LREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVK 134
Query: 386 QIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
I + G ++IHE + IHRD+K AN L++++ K+ DFGL +
Sbjct: 135 TILYNLLLGEKFIHESGI---IHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 104/253 (41%), Gaps = 56/253 (22%)
Query: 274 FSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELK 333
+ + IGQG +G V A + + +R I +M K I++++ + E++
Sbjct: 28 YHLKGAIGQGSYGVVRVA-IENQ------TRAIRAIKIMNKNKIRQINPKDVERIKTEVR 80
Query: 334 VLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNL------------------------- 367
++ +HH N+ RL Y E + LV E G+L
Sbjct: 81 LMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140
Query: 368 ------SEHLRGS---GRDPLPWSSRVQIALDSAR----GLEYIHEHTVPVYIHRDIKSA 414
E + GS R+ L + R ++ + R L Y+H + HRDIK
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGI---CHRDIKPE 197
Query: 415 NILI--DKNFHAKVADFGLTK---LTEVGSASLPTRLVGTFGYMPPEYAQYGDVS--PKV 467
N L +K+F K+ DFGL+K G T GT ++ PE + S PK
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257
Query: 468 DVYAFGVVLYELI 480
D ++ GV+L+ L+
Sbjct: 258 DAWSAGVLLHLLL 270
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 96
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 155
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 156 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 212
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 213 NV--SYICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 251
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 98
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 99 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 157
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 158 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 214
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 215 NV--SYICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 253
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLT--EVGSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+LI+ K+ DFGL ++ E T V T
Sbjct: 155 RGLKYIHSANV---LHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE L+ + ++Q A K
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE--------LVAIKKVLQGKAFKNR---------- 62
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHY-SRAKQTLPV 121
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 179 NV--SXICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 96
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 155
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 156 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 212
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 213 NV--SXICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 251
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 75
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 76 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 134
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 135 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 191
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 192 NV--SYICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 230
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 81
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 82 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 140
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 141 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 197
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 198 NV--SXICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 236
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 90
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 91 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 149
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 150 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 206
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 207 NV--SYICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 245
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 67
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 68 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 126
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 127 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 183
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 184 NV--SYICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 222
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 100
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 101 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 159
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 160 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 216
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 217 NV--SYICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 255
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 70
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 71 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 129
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 130 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 186
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 187 NV--SXICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 225
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA- 330
D + ++G G F V + G Y ++ I +K K SRE +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKST-GLQYAAKFI------KKRRTKSSRRGVSREDIER 63
Query: 331 ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ +L + H N++ L Y + + L+ E + G L + L + ++ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTEVGSASLPTR 445
G+ Y+H + H D+K NI L+D+N K+ DFGL + G+
Sbjct: 122 QILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN 176
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+ GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 74
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 133
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 134 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 190
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 191 NV--SXICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 229
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ FGL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 159 NEDCELKILGFGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 62
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 121
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 179 NV--SXICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 63
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 64 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 122
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 123 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 179
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 180 NV--SXICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 218
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 62
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 121
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 179 NV--SXICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 217
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 74
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 133
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 134 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 190
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 191 NV--SXICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 229
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA- 330
D + ++G G F V + G Y ++ I +K K SRE +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKST-GLQYAAKFI------KKRRTKSSRRGVSREDIER 63
Query: 331 ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ +L + H N++ L Y + + L+ E + G L + L + ++ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTEVGSASLPTR 445
G+ Y+H + H D+K NI L+D+N K+ DFGL + G+
Sbjct: 122 QILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN 176
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+ GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 141
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 142 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 200
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 201 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 257
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 258 NV--SYICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 296
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 66
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 67 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 125
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 126 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 182
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 183 NV--SXICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 221
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA- 330
D + ++G G F V + G Y ++ I +K K SRE +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKST-GLQYAAKFI------KKRRTKSSRRGVSREDIER 63
Query: 331 ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ +L + H N++ L Y + + L+ E + G L + L + ++ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTEVGSASLPTR 445
G+ Y+H + H D+K NI L+D+N K+ DFGL + G+
Sbjct: 122 QILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN 176
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+ GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 13/215 (6%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + + IG+G F V + E G + +++ V + D++
Sbjct: 26 DVYELCEVIGKGPFSVVRRC-INRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 84
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRV--QIAL 389
LK H H + L+ Y +G L++V+E+++ +L + +S V
Sbjct: 85 LK---HPHIVELLET--YSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 139
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILI-DKNFHAKVADFGLTKLTEVGSASL-PTRLV 447
L Y H++ + IHRD+K +L+ K A V G ++G + L V
Sbjct: 140 QILEALRYCHDNNI---IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV 196
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
GT +M PE + VDV+ GV+L+ L+S
Sbjct: 197 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA- 330
D + ++G G F V + G Y ++ I +K K SRE +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKST-GLQYAAKFI------KKRRTKSSRRGVSREDIER 63
Query: 331 ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ +L + H N++ L Y + + L+ E + G L + L + ++ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTEVGSASLPTR 445
G+ Y+H + H D+K NI L+D+N K+ DFGL + G+
Sbjct: 122 QILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN 176
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+ GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA- 330
D + ++G G F V + G Y ++ I +K K SRE +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKST-GLQYAAKFI------KKRRTKSSRRGVSREDIER 63
Query: 331 ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ +L + H N++ L Y + + L+ E + G L + L + ++ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTEVGSASLPTR 445
G+ Y+H + H D+K NI L+D+N K+ DFGL + G+
Sbjct: 122 QILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN 176
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+ GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ D GL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 159 NEDCELKILDAGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 62
Query: 331 ELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + E L LV +Y+ ++ H + LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 121
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 179 NV--SYICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 13/215 (6%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + + IG+G F V + E G + +++ V + D++
Sbjct: 24 DVYELCEVIGKGPFSVVRRC-INRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRV--QIAL 389
LK H H + L L Y +G L++V+E+++ +L + +S V
Sbjct: 83 LK---HPHIVEL--LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILI-DKNFHAKVADFGLTKLTEVGSASL-PTRLV 447
L Y H++ + IHRD+K +L+ K A V G ++G + L V
Sbjct: 138 QILEALRYCHDNNI---IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV 194
Query: 448 GTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
GT +M PE + VDV+ GV+L+ L+S
Sbjct: 195 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ D GL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 159 NEDCELKILDRGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA- 330
D + ++G G F V + G Y ++ I +K K SRE +
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKST-GLQYAAKFI------KKRRTKSSRRGVSREDIER 62
Query: 331 ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ +L + H N++ L Y + + L+ E + G L + L + ++ L +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 120
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTEVGSASLPTR 445
G+ Y+H + H D+K NI L+D+N K+ DFGL + G+
Sbjct: 121 QILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN 175
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+ GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 30/187 (16%)
Query: 313 QKAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 48 HRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFN 100
Query: 367 ---LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANIL 417
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+
Sbjct: 101 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLA 157
Query: 418 IDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVL 476
++++ K+ DF L + T+ T V T Y PE + + VD+++ G ++
Sbjct: 158 VNEDCELKILDFYLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 477 YELISAK 483
EL++ +
Sbjct: 214 AELLTGR 220
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA- 330
D + ++G G F V + G Y ++ I +K K SRE +
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKST-GLQYAAKFI------KKRRTKSSRRGVSREDIER 63
Query: 331 ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ +L + H N++ L Y + + L+ E + G L + L + ++ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTEVGSASLPTR 445
G+ Y+H + H D+K NI L+D+N K+ DFGL + G+
Sbjct: 122 QILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN 176
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+ GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA- 330
D + ++G G F V + G Y ++ I +K K SRE +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKST-GLQYAAKFI------KKRRTKSSRRGVSREDIER 63
Query: 331 ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ +L + H N++ L Y + + L+ E + G L + L + ++ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTEVGSASLPTR 445
G+ Y+H + H D+K NI L+D+N K+ DFGL + G+
Sbjct: 122 QILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN 176
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+ GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA- 330
D + ++G G F V + G Y ++ I +K K SRE +
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKST-GLQYAAKFI------KKRRTKSSRRGVSREDIER 62
Query: 331 ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ +L + H N++ L Y + + L+ E + G L + L + ++ L +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 120
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTEVGSASLPTR 445
G+ Y+H + H D+K NI L+D+N K+ DFGL + G+
Sbjct: 121 QILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN 175
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+ GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA- 330
D + ++G G F V + G Y ++ I +K K SRE +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKST-GLQYAAKFI------KKRRTKSSRRGVSREDIER 63
Query: 331 ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ +L + H N++ L Y + + L+ E + G L + L + ++ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTEVGSASLPTR 445
G+ Y+H + H D+K NI L+D+N K+ DFGL + G+
Sbjct: 122 QILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN 176
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+ GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA- 330
D + ++G G F V + G Y ++ I +K K SRE +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKS-TGLQYAAKFI------KKRRTKSSRRGVSREDIER 63
Query: 331 ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ +L + H N++ L Y + + L+ E + G L + L + ++ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTEVGSASLPTR 445
G+ Y+H + H D+K NI L+D+N K+ DFGL + G+
Sbjct: 122 QILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN 176
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+ GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 95/222 (42%), Gaps = 39/222 (17%)
Query: 273 NFSMSHKIGQGGFGAVYYAEL--RGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA 330
+++ + IG G FG VY A+L GE AIKK+ +Q R
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGEL-----------------VAIKKV-LQDKRFKNR 62
Query: 331 ELKVLTHVHHLNLVRLIGYCVEGS-------LFLVYEYIENG--NLSEHLRGSGRDPLPW 381
EL+++ + H N+VRL + L LV +Y+ ++ H + LP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 121
Query: 382 SSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSA 440
R L YIH + HRDIK N+L+D + K+ DFG K G
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
Query: 441 SLPTRLVGTFGYMPPEYAQYG--DVSPKVDVYAFGVVLYELI 480
++ + + Y PE +G D + +DV++ G VL EL+
Sbjct: 179 NV--SXICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 298 GNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSL-- 355
G + R +++++ ++ + SR+F E L H N++ ++G C
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 356 -FLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSA 414
L+ ++ G+L L + S V+ ALD ARG+ ++H P+ + S
Sbjct: 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSR 142
Query: 415 NILIDKNFHAKVADFGLTKLTEVG-SASLPTRLVGTFGYMPPEYAQYG--DVSPK-VDVY 470
+++ID++ A+++ + +V S P R+ ++ PE Q D + + D++
Sbjct: 143 SVMIDEDMTARIS------MADVKFSFQSPGRMYAP-AWVAPEALQKKPEDTNRRSADMW 195
Query: 471 AFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPL 530
+F V+L+EL++ + + + S+ + VAL E LR + P + +
Sbjct: 196 SFAVLLWELVTRE--VPFADLSNMEIGMKVAL-----------EGLRPTIPPGISPH--- 239
Query: 531 DSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
+++L K+C E P RP IV L
Sbjct: 240 -----VSKLMKICMNEDPAKRPKFDMIVPIL 265
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 28/192 (14%)
Query: 313 QKAAIKKMDMQASREFLA-----ELKVLTHVHHLNLVRLIGYCVEGS-------LFLVYE 360
+K AIKK+ E A EL +L H+ H N++ L+ S +LV
Sbjct: 68 EKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP 127
Query: 361 YIENGNLSEHLRGSGRDPLPWSSRVQ-IALDSARGLEYIHEHTVPVYIHRDIKSANILID 419
+++ +L + + + ++Q + +GL+YIH V +HRD+K N+ ++
Sbjct: 128 FMQT-DLQKIMGMEFSE-----EKIQYLVYQMLKGLKYIHSAGV---VHRDLKPGNLAVN 178
Query: 420 KNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLYE 478
++ K+ DFGL + + T V T Y PE + + VD+++ G ++ E
Sbjct: 179 EDCELKILDFGLARHADAEM----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAE 234
Query: 479 LISAKEAIVKGN 490
+++ K + KG
Sbjct: 235 MLTGK-TLFKGK 245
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 314 KAAIKKMD------MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN- 366
+ A+KK+ + A R + EL++L H+ H N++ L+ +F +E N
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLL------DVFTPARSLEEFND 101
Query: 367 --LSEHLRGSGRDPLPWSSR-----VQIAL-DSARGLEYIHEHTVPVYIHRDIKSANILI 418
L HL G+ + + + VQ + RGL+YIH + IHRD+K +N+ +
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAV 158
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ D GL + T+ T V T Y PE + + VD+++ G ++
Sbjct: 159 NEDCELKILDGGLARHTD----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 478 ELISAK 483
EL++ +
Sbjct: 215 ELLTGR 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 119/296 (40%), Gaps = 53/296 (17%)
Query: 274 FSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+S+ +IG GG V+ E + Y Y++ +++A + +D + R +A
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN--------LEEADNQTLD--SYRNEIAY 79
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPL-PWSSRVQIALD 390
L L H ++RL Y + +Y +E GN+ + + + PW R +
Sbjct: 80 LNKLQQ-HSDKIIRLYDYEITDQY--IYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKN 135
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL-PTRLVGT 449
+ IH+H + +H D+K AN LI K+ DFG+ + + S+ VGT
Sbjct: 136 MLEAVHTIHQHGI---VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGT 191
Query: 450 FGYMPPEYAQYGDVSPK-----------VDVYAFGVVLYELISAKEAIVKGNGSSADSKG 498
YMPPE + S + DV++ G +LY + K
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------------- 238
Query: 499 LVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSM 554
F++++N I L ++DP P + + K C + P+ R S+
Sbjct: 239 ----FQQIIN---QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 287
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 43/259 (16%)
Query: 248 PTSLNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLIC 307
P SL + +F + + + + +GGF VY A+ G L RL+
Sbjct: 4 PGSLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLS 63
Query: 308 VNLLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSL-----------F 356
+A I+++ F+ +L H N+V+ +C S+ F
Sbjct: 64 NEEEKNRAIIQEVC------FMKKLS-----GHPNIVQ---FCSAASIGKEESDTGQAEF 109
Query: 357 LVYEYIENGNLSEHLRG-SGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSAN 415
L+ + G L E L+ R PL + ++I + R ++++H P+ IHRD+K N
Sbjct: 110 LLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPI-IHRDLKVEN 168
Query: 416 ILIDKNFHAKVADFG----LTKLTEVGSASLPTRLV-------GTFGYMPPE----YAQY 460
+L+ K+ DFG ++ + ++ LV T Y PE Y+ +
Sbjct: 169 LLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNF 228
Query: 461 GDVSPKVDVYAFGVVLYEL 479
+ K D++A G +LY L
Sbjct: 229 -PIGEKQDIWALGCILYLL 246
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 313 QKAAIKKMDMQASREFLA-----ELKVLTHVHHLNLVRLIGYCVEGS-------LFLVYE 360
+K AIKK+ E A EL +L H+ H N++ L+ S +LV
Sbjct: 50 EKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP 109
Query: 361 YIENGNLSEHLRGSGRDPLPWSS-RVQ-IALDSARGLEYIHEHTVPVYIHRDIKSANILI 418
+++ + + G L +S ++Q + +GL+YIH V +HRD+K N+ +
Sbjct: 110 FMQTD--LQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHSAGV---VHRDLKPGNLAV 159
Query: 419 DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLY 477
+++ K+ DFGL + + T V T Y PE + + VD+++ G ++
Sbjct: 160 NEDCELKILDFGLARHADAEM----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMA 215
Query: 478 ELISAKEAIVKGN 490
E+++ K + KG
Sbjct: 216 EMLTGK-TLFKGK 227
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
DN+ + H IG+G +G VY A + N + + VN + + D+ + L E
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKK---VNRMFE-------DLIDCKRILRE 75
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYE-YIENGNLSEHLRGSGRDPLPWSSR--VQIA 388
+ +L + ++RL + L E YI L+ + P+ + I
Sbjct: 76 ITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTIL 135
Query: 389 LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+ G +IHE + IHRD+K AN L++++ KV DFGL +
Sbjct: 136 YNLLLGENFIHESGI---IHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 126/313 (40%), Gaps = 53/313 (16%)
Query: 257 DKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQK 314
DK+ + E +S +S+ +IG GG V+ E + Y Y++ +++
Sbjct: 41 DKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN--------LEE 92
Query: 315 AAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGS 374
A + +D + R +A L L H ++RL Y + +Y +E GN+ +
Sbjct: 93 ADNQTLD--SYRNEIAYLNKLQQ-HSDKIIRLYDYEITDQY--IYMVMECGNIDLNSWLK 147
Query: 375 GRDPL-PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+ + PW R + + IH+H + +H D+K AN LI K+ DFG+
Sbjct: 148 KKKSIDPWE-RKSYWKNMLEAVHTIHQHGI---VHSDLKPANFLIVDGM-LKLIDFGIAN 202
Query: 434 LTEVGSASL-PTRLVGTFGYMPPEYAQYGDVSPK-----------VDVYAFGVVLYELIS 481
+ + S+ VGT YMPPE + S + DV++ G +LY +
Sbjct: 203 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 262
Query: 482 AKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAK 541
K F++++N I L ++DP P + + K
Sbjct: 263 GKTP-----------------FQQIIN---QISKLHAIIDPNHEIEFPDIPEKDLQDVLK 302
Query: 542 VCTQEYPQLRPSM 554
C + P+ R S+
Sbjct: 303 CCLKRDPKQRISI 315
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 119/296 (40%), Gaps = 53/296 (17%)
Query: 274 FSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+S+ +IG GG V+ E + Y Y++ +++A + +D + R +A
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN--------LEEADNQTLD--SYRNEIAY 63
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPL-PWSSRVQIALD 390
L L H ++RL Y + +Y +E GN+ + + + PW R +
Sbjct: 64 LNKLQQ-HSDKIIRLYDYEITDQY--IYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKN 119
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL-PTRLVGT 449
+ IH+H + +H D+K AN LI K+ DFG+ + + S+ VGT
Sbjct: 120 MLEAVHTIHQHGI---VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGT 175
Query: 450 FGYMPPEYAQYGDVSPK-----------VDVYAFGVVLYELISAKEAIVKGNGSSADSKG 498
YMPPE + S + DV++ G +LY + K
Sbjct: 176 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------------- 222
Query: 499 LVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSM 554
F++++N I L ++DP P + + K C + P+ R S+
Sbjct: 223 ----FQQIIN---QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 271
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 22/233 (9%)
Query: 256 VDKSVEFSYEELSKATDNFSM--SHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQ 313
VD E Y + + +NF + S ++G+G F V + G Y ++ +
Sbjct: 11 VDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQC-ISKSTGQEYAAKFL------- 62
Query: 314 KAAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGS--LFLVYEYIENGNLSEHL 371
K + D +A E L E+ VL V + E + + L+ EY G +
Sbjct: 63 KKRRRGQDCRA--EILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLC 120
Query: 372 RGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNF---HAKVAD 428
+ + + +++ G+ Y+H++ + +H D+K NIL+ + K+ D
Sbjct: 121 LPELAEMVSENDVIRLIKQILEGVYYLHQNNI---VHLDLKPQNILLSSIYPLGDIKIVD 177
Query: 429 FGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELIS 481
FG+++ ++G A ++GT Y+ PE Y ++ D++ G++ Y L++
Sbjct: 178 FGMSR--KIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 16/171 (9%)
Query: 321 DMQASRE-FLAELKVLTHVH-HLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRD 377
++Q RE L E+ +L V H N+++L Y FLV++ ++ G L ++L
Sbjct: 49 EVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL 108
Query: 378 PLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV 437
+ ++ AL LE I +HRD+K NIL+D + + K+ DFG + +
Sbjct: 109 SEKETRKIMRAL-----LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 163
Query: 438 GSASLPTRLVGTFGYMPPEYAQ--YGDVSP----KVDVYAFGVVLYELISA 482
G + GT Y+ PE + D P +VD+++ GV++Y L++
Sbjct: 164 GEKL--REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREF----LAELKVL 335
IG+G +G V A Y N VN + + AIKK+ + + L E+K+L
Sbjct: 51 IGEGAYGMVCSA-----YDN--------VNKV--RVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 336 THVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQ------IAL 389
H N++ + ++ E +++ L HL G+ L + +
Sbjct: 96 LRFRHENIIGINDIIRAPTI----EQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLY 151
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLV 447
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V
Sbjct: 152 QILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 448 GTFGYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
T Y PE + +D+++ G +L E++S +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 90/225 (40%), Gaps = 43/225 (19%)
Query: 279 KIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHV 338
K+G+GGF V E + L R++C ++ A ++ DM R F
Sbjct: 36 KLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMH--RLF---------- 83
Query: 339 HHLNLVRLIGYCV-----EGSLFLVYEYIENGNLS---EHLRGSG----RDPLPWSSRVQ 386
+H N++RL+ YC+ + +L+ + + G L E L+ G D + W
Sbjct: 84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW----- 138
Query: 387 IALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRL 446
+ L RGLE IH Y HRD+K NIL+ + D G + L
Sbjct: 139 LLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQAL 195
Query: 447 V--------GTFGYMPPEY---AQYGDVSPKVDVYAFGVVLYELI 480
T Y PE + + + DV++ G VLY ++
Sbjct: 196 TLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA- 330
D + ++G G F V + G Y ++ I +K K SRE +
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKST-GLQYAAKFI------KKRRTKSSRRGVSREDIER 63
Query: 331 ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ +L + H N++ L Y + + L+ E + G L + L + ++ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTEVGSASLPTR 445
G+ Y+H + H D+K NI L+D+N K+ DFGL + G+
Sbjct: 122 QILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN 176
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+ GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLA- 330
D + ++G G F V + G Y ++ I +K K SRE +
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKST-GLQYAAKFI------KKRRTKSSRRGVSREDIER 63
Query: 331 ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIAL 389
E+ +L + H N++ L Y + + L+ E + G L + L + ++ L +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL--AEKESLTEEEATEFLK 121
Query: 390 DSARGLEYIHEHTVPVYIHRDIKSANI-LIDKNF---HAKVADFGLTKLTEVGSASLPTR 445
G+ Y+H + H D+K NI L+D+N K+ DFGL + G+
Sbjct: 122 QILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KN 176
Query: 446 LVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISA 482
+ GT ++ PE Y + + D+++ GV+ Y L+S
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 119/296 (40%), Gaps = 53/296 (17%)
Query: 274 FSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+S+ +IG GG V+ E + Y Y++ +++A + +D + R +A
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN--------LEEADNQTLD--SYRNEIAY 59
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPL-PWSSRVQIALD 390
L L H ++RL Y + +Y +E GN+ + + + PW R +
Sbjct: 60 LNKLQQ-HSDKIIRLYDYEITDQY--IYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKN 115
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL-PTRLVGT 449
+ IH+H + +H D+K AN LI K+ DFG+ + + S+ VGT
Sbjct: 116 MLEAVHTIHQHGI---VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGT 171
Query: 450 FGYMPPEYAQYGDVSPK-----------VDVYAFGVVLYELISAKEAIVKGNGSSADSKG 498
YMPPE + S + DV++ G +LY + K
Sbjct: 172 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------------- 218
Query: 499 LVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSM 554
F++++N I L ++DP P + + K C + P+ R S+
Sbjct: 219 ----FQQIIN---QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 267
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 126/313 (40%), Gaps = 53/313 (16%)
Query: 257 DKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQK 314
DK+ + E +S +S+ +IG GG V+ E + Y Y++ +++
Sbjct: 41 DKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN--------LEE 92
Query: 315 AAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGS 374
A + +D + R +A L L H ++RL Y + +Y +E GN+ +
Sbjct: 93 ADNQTLD--SYRNEIAYLNKLQQ-HSDKIIRLYDYEITDQY--IYMVMECGNIDLNSWLK 147
Query: 375 GRDPL-PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+ + PW R + + IH+H + +H D+K AN LI K+ DFG+
Sbjct: 148 KKKSIDPWE-RKSYWKNMLEAVHTIHQHGI---VHSDLKPANFLIVDGM-LKLIDFGIAN 202
Query: 434 LTEVGSASL-PTRLVGTFGYMPPEYAQYGDVSPK-----------VDVYAFGVVLYELIS 481
+ + S+ VGT YMPPE + S + DV++ G +LY +
Sbjct: 203 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 262
Query: 482 AKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAK 541
K F++++N I L ++DP P + + K
Sbjct: 263 GKTP-----------------FQQIIN---QISKLHAIIDPNHEIEFPDIPEKDLQDVLK 302
Query: 542 VCTQEYPQLRPSM 554
C + P+ R S+
Sbjct: 303 CCLKRDPKQRISI 315
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 119/296 (40%), Gaps = 53/296 (17%)
Query: 274 FSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+S+ +IG GG V+ E + Y Y++ +++A + +D + R +A
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN--------LEEADNQTLD--SYRNEIAY 60
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPL-PWSSRVQIALD 390
L L H ++RL Y + +Y +E GN+ + + + PW R +
Sbjct: 61 LNKLQQ-HSDKIIRLYDYEITDQY--IYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKN 116
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASL-PTRLVGT 449
+ IH+H + +H D+K AN LI K+ DFG+ + + S+ VGT
Sbjct: 117 MLEAVHTIHQHGI---VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGT 172
Query: 450 FGYMPPEYAQYGDVSPK-----------VDVYAFGVVLYELISAKEAIVKGNGSSADSKG 498
YMPPE + S + DV++ G +LY + K
Sbjct: 173 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------------- 219
Query: 499 LVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSM 554
F++++N I L ++DP P + + K C + P+ R S+
Sbjct: 220 ----FQQIIN---QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 268
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 107/234 (45%), Gaps = 40/234 (17%)
Query: 274 FSMSHKIGQGGFGAVYYAELR--GEYGNSYLSRLICVNLLMQKAAIKKMDMQAS-REFLA 330
+ + K+G+G +G V+ + R GE ++ V + A D Q + RE +
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGE--------VVAVKKIFD-AFQNSTDAQRTFREIMI 61
Query: 331 ELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALD 390
++ H + +NL+ ++ + ++LV++Y+E +L +R + +P+ + +
Sbjct: 62 LTELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPV---HKQYVVYQ 117
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKL---------------- 434
+ ++Y+H + +HRD+K +NIL++ H KVADFGL++
Sbjct: 118 LIKVIKYLHSGGL---LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSIN 174
Query: 435 --TEVGSASLP--TRLVGTFGYMPPEYAQYGDVSPK-VDVYAFGVVLYELISAK 483
TE P T V T Y PE K +D+++ G +L E++ K
Sbjct: 175 ENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 16/171 (9%)
Query: 321 DMQASREF-LAELKVLTHVH-HLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRD 377
++Q RE L E+ +L V H N+++L Y FLV++ ++ G L ++L
Sbjct: 62 EVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL 121
Query: 378 PLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV 437
+ ++ AL LE I +HRD+K NIL+D + + K+ DFG + +
Sbjct: 122 SEKETRKIMRAL-----LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
Query: 438 GSASLPTRLVGTFGYMPPEYAQ--YGDVSP----KVDVYAFGVVLYELISA 482
G + GT Y+ PE + D P +VD+++ GV++Y L++
Sbjct: 177 GEKL--REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 139 RGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 139 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 16/171 (9%)
Query: 321 DMQASRE-FLAELKVLTHVH-HLNLVRLIG-YCVEGSLFLVYEYIENGNLSEHLRGSGRD 377
++Q RE L E+ +L V H N+++L Y FLV++ ++ G L ++L
Sbjct: 62 EVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL 121
Query: 378 PLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV 437
+ ++ AL LE I +HRD+K NIL+D + + K+ DFG + +
Sbjct: 122 SEKETRKIMRAL-----LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
Query: 438 GSASLPTRLVGTFGYMPPEYAQ--YGDVSP----KVDVYAFGVVLYELISA 482
G + GT Y+ PE + D P +VD+++ GV++Y L++
Sbjct: 177 GEKL--RSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 40/198 (20%)
Query: 315 AAIKKMDMQASREFLAELKVLTHVH-HLNLVRLIGYCVEGSLFLVY-----------EYI 362
A+K+M + L E+K+LT H N++R YC E + +Y + +
Sbjct: 60 VAVKRMLIDFCDIALMEIKLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLV 117
Query: 363 ENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILID--- 419
E+ N+S+ ++ P S QIA A H H++ + IHRD+K NIL+
Sbjct: 118 ESKNVSDENLKLQKEYNPISLLRQIASGVA------HLHSLKI-IHRDLKPQNILVSTSS 170
Query: 420 ----------KNFHAKVADFGLTKLTEVGSASLPTRL---VGTFGYMPPEYAQYG---DV 463
+N ++DFGL K + G L GT G+ PE + +
Sbjct: 171 RFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRL 230
Query: 464 SPKVDVYAFGVVLYELIS 481
+ +D+++ G V Y ++S
Sbjct: 231 TRSIDIFSMGCVFYYILS 248
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 135 RGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 140 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 141 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 132 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 139 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 40/198 (20%)
Query: 315 AAIKKMDMQASREFLAELKVLTHVH-HLNLVRLIGYCVEGSLFLVY-----------EYI 362
A+K+M + L E+K+LT H N++R YC E + +Y + +
Sbjct: 60 VAVKRMLIDFCDIALMEIKLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLV 117
Query: 363 ENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILID--- 419
E+ N+S+ ++ P S QIA A H H++ + IHRD+K NIL+
Sbjct: 118 ESKNVSDENLKLQKEYNPISLLRQIASGVA------HLHSLKI-IHRDLKPQNILVSTSS 170
Query: 420 ----------KNFHAKVADFGLTKLTEVGSASLPTRL---VGTFGYMPPEYAQYG---DV 463
+N ++DFGL K + G L GT G+ PE + +
Sbjct: 171 RFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRL 230
Query: 464 SPKVDVYAFGVVLYELIS 481
+ +D+++ G V Y ++S
Sbjct: 231 TRSIDIFSMGCVFYYILS 248
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 137 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 139 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 135 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 139 RGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 137 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 133 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 133 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 143 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 135 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 155 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 135 RGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 44/196 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + SL +
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
+V E + + NLS+ +Q+ LD R G++++H +
Sbjct: 106 IVMELM-DANLSQ--------------VIQMELDHERMSYLLYQMLVGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISA 482
VD+++ GV++ E+I
Sbjct: 206 VDIWSVGVIMGEMIKG 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 135 RGLKYIHSANV---LHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + T V T
Sbjct: 137 RGLKYIHSANV---LHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 44/202 (21%)
Query: 315 AAIKKMDMQASREFLAELKVLTHVH-HLNLVRLIGYCVEGSLFLVY-----------EYI 362
A+K+M + L E+K+LT H N++R YC E + +Y + +
Sbjct: 42 VAVKRMLIDFCDIALMEIKLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLV 99
Query: 363 ENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILID--- 419
E+ N+S+ ++ P S QIA A H H++ + IHRD+K NIL+
Sbjct: 100 ESKNVSDENLKLQKEYNPISLLRQIASGVA------HLHSLKI-IHRDLKPQNILVSTSS 152
Query: 420 ----------KNFHAKVADFGLTKLTEVGSASLPTRL---VGTFGYMPPEYAQYGD---- 462
+N ++DFGL K + G L GT G+ PE + +
Sbjct: 153 RFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQT 212
Query: 463 ---VSPKVDVYAFGVVLYELIS 481
++ +D+++ G V Y ++S
Sbjct: 213 KRRLTRSIDIFSMGCVFYYILS 234
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 125/312 (40%), Gaps = 66/312 (21%)
Query: 256 VDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA 315
V K +E YE + + ++ F + KIG+G F +VY A + + G +K
Sbjct: 5 VKKDIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPE------------EKI 52
Query: 316 AIKKM-DMQASREFLAELKVLTHVHHLNLVRLIGYCVEGS--LFLVYEYIENGNLSEHLR 372
A+K + AEL+ LT + V + YC + + + Y+E+ + + L
Sbjct: 53 ALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL- 111
Query: 373 GSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGL 431
+ L + + L+ + L+ IH+ + +HRD+K +N L ++ + DFGL
Sbjct: 112 ----NSLSFQEVREYMLNLFKALKRIHQFGI---VHRDVKPSNFLYNRRLKKYALVDFGL 164
Query: 432 TKLTE---------VGSASLPTRL------------------VGTFGYMPPE-YAQYGDV 463
+ T V S + R GT G+ PE + +
Sbjct: 165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQ 224
Query: 464 SPKVDVYAFGVVLYELISAKEAIVKGN-------------GSSADSKGLVALFEEVLNLP 510
+ +D+++ GV+ L+S + K + GS + + +L
Sbjct: 225 TTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSK 284
Query: 511 D-PIEDLRKLVD 521
+ P +DLRKL +
Sbjct: 285 EVPAQDLRKLCE 296
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 355 LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSA 414
L ++ E +E G L ++ G +I D ++++H H + HRD+K
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI---AHRDVKPE 157
Query: 415 NILI---DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYA 471
N+L +K+ K+ DFG K T + P T Y+ PE D+++
Sbjct: 158 NLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKSCDMWS 214
Query: 472 FGVVLYELI 480
GV++Y L+
Sbjct: 215 LGVIMYILL 223
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 355 LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSA 414
L ++ E +E G L ++ G +I D ++++H H + HRD+K
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI---AHRDVKPE 138
Query: 415 NILI---DKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYA 471
N+L +K+ K+ DFG K T + P T Y+ PE D+++
Sbjct: 139 NLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKSCDMWS 195
Query: 472 FGVVLYELI 480
GV++Y L+
Sbjct: 196 LGVIMYILL 204
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 44/196 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + SL +
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
+V E + + NLS+ +Q+ LD R G++++H +
Sbjct: 106 IVMELM-DANLSQ--------------VIQMELDHERMSYLLYQMLVGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISA 482
VD+++ GV++ E+I
Sbjct: 206 VDIWSVGVIMGEMIKG 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 53/224 (23%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKA-AIKKMDMQASREFLAELKVLTHV 338
+G G G + Y RG + N R + V ++ + + ++Q RE
Sbjct: 32 LGHGAEGTIVY---RGMFDN----RDVAVKRILPECFSFADREVQLLRE---------SD 75
Query: 339 HHLNLVRLIGYCVEGSLFLVY-----------EYIENGNLSEHLRGSGRDPLPWSSRVQI 387
H N++R +C E Y EY+E + + HL G +P + +
Sbjct: 76 EHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFA-HL---GLEP------ITL 123
Query: 388 ALDSARGLEYIHEHTVPVYIHRDIKSANILID-KNFHAK----VADFGLTKLTEVGSASL 442
+ GL ++H + +HRD+K NILI N H K ++DFGL K VG S
Sbjct: 124 LQQTTSGLAHLHSLNI---VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF 180
Query: 443 PTR--LVGTFGYMPPEY-AQYGDVSP--KVDVYAFGVVLYELIS 481
R + GT G++ PE ++ +P VD+++ G V Y +IS
Sbjct: 181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 331 ELKVLTHVHHLNLVRLIGYCV---EGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQI 387
E+++L + H N+++L+ + +++V EY G + E L P
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGY 114
Query: 388 ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLV 447
GLEY+H + +H+DIK N+L+ K++ G+ + +A R
Sbjct: 115 FCQLIDGLEYLHSQGI---VHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS 171
Query: 448 -GTFGYMPPEYAQYGDVSP--KVDVYAFGVVLYELISA 482
G+ + PPE A D KVD+++ GV LY + +
Sbjct: 172 QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 125/313 (39%), Gaps = 53/313 (16%)
Query: 257 DKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQK 314
DK+ + E +S +S+ +IG GG V+ E + Y Y++ +++
Sbjct: 41 DKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN--------LEE 92
Query: 315 AAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGS 374
A + +D + R +A L L H ++RL Y + +Y +E GN+ +
Sbjct: 93 ADNQTLD--SYRNEIAYLNKLQQ-HSDKIIRLYDYEITDQY--IYMVMECGNIDLNSWLK 147
Query: 375 GRDPL-PWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTK 433
+ + PW R + + IH+H + +H D+K AN LI K+ DFG+
Sbjct: 148 KKKSIDPWE-RKSYWKNMLEAVHTIHQHGI---VHSDLKPANFLIVDGM-LKLIDFGIAN 202
Query: 434 LTEVGSASL-PTRLVGTFGYMPPEYAQYGDVSPK-----------VDVYAFGVVLYELIS 481
+ + S+ VG YMPPE + S + DV++ G +LY +
Sbjct: 203 QMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 262
Query: 482 AKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAK 541
K F++++N I L ++DP P + + K
Sbjct: 263 GKTP-----------------FQQIIN---QISKLHAIIDPNHEIEFPDIPEKDLQDVLK 302
Query: 542 VCTQEYPQLRPSM 554
C + P+ R S+
Sbjct: 303 CCLKRDPKQRISI 315
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 53/258 (20%)
Query: 257 DKSVEFSY----EELSKA-TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVN-- 309
DK V+ SY +SK+ DN S ++G F + + G S ++C
Sbjct: 25 DKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIG-SGAQGIVCAAYD 83
Query: 310 -LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------ 355
+L + AIKK+ A R + EL ++ V+H N++ L+ + + +L
Sbjct: 84 AVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 142
Query: 356 FLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPV 405
+LV E ++ NL + +Q+ LD R G++++H +
Sbjct: 143 YLVMELMD-ANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI-- 185
Query: 406 YIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSP 465
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 186 -IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKE 242
Query: 466 KVDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 243 NVDIWSVGCIMGEMVRHK 260
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 118/296 (39%), Gaps = 53/296 (17%)
Query: 274 FSMSHKIGQGGFGAVYYA--ELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
+S+ +IG GG V+ E + Y Y++ +++A + +D + R +A
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN--------LEEADNQTLD--SYRNEIAY 79
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPL-PWSSRVQIALD 390
L L H ++RL Y + +Y +E GN+ + + + PW R +
Sbjct: 80 LNKLQQ-HSDKIIRLYDYEITDQY--IYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKN 135
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL-TKLTEVGSASLPTRLVGT 449
+ IH+H + +H D+K AN LI K+ DFG+ ++ + VGT
Sbjct: 136 MLEAVHTIHQHGI---VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGT 191
Query: 450 FGYMPPEYAQYGDVSPK-----------VDVYAFGVVLYELISAKEAIVKGNGSSADSKG 498
YMPPE + S + DV++ G +LY + K
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------------- 238
Query: 499 LVALFEEVLNLPDPIEDLRKLVDPRLGDNCPLDSVLKMAQLAKVCTQEYPQLRPSM 554
F++++N I L ++DP P + + K C + P+ R S+
Sbjct: 239 ----FQQIIN---QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 287
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + V T
Sbjct: 139 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 393 RGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEV--GSASLPTRLVGTF 450
RGL+YIH V +HRD+K +N+L++ K+ DFGL ++ + V T
Sbjct: 140 RGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 451 GYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAK 483
Y PE + +D+++ G +L E++S +
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 44/196 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + SL +
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
+V E + + NLS+ +Q+ LD R G++++H +
Sbjct: 106 IVMELM-DANLSQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISA 482
VD+++ G ++ E+I
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 44/196 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + SL +
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
+V E + + NLS+ +Q+ LD R G++++H +
Sbjct: 106 IVMELM-DANLSQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISA 482
VD+++ G ++ E+I
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 44/196 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + SL +
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
+V E + + NLS+ +Q+ LD R G++++H +
Sbjct: 106 IVMELM-DANLSQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISA 482
VD+++ G ++ E+I
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 113/272 (41%), Gaps = 38/272 (13%)
Query: 298 GNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCVEGSL-- 355
G + R +++++ ++ + SR+F E L H N++ ++G C
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 356 -FLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSA 414
L+ + G+L L + S V+ ALD ARG ++H P+ + S
Sbjct: 84 PTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT-LEPLIPRHALNSR 142
Query: 415 NILIDKNFHAKV--ADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYG--DVSPK-VDV 469
++ ID++ A++ AD + G P ++ PE Q D + + D
Sbjct: 143 SVXIDEDXTARISXADVKFS-FQSPGRXYAP-------AWVAPEALQKKPEDTNRRSADX 194
Query: 470 YAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGDNCP 529
++F V+L+EL++ + + + S+ + VAL E LR + P + +
Sbjct: 195 WSFAVLLWELVTRE--VPFADLSNXEIGXKVAL-----------EGLRPTIPPGISPH-- 239
Query: 530 LDSVLKMAQLAKVCTQEYPQLRPSMRSIVVAL 561
+++L K+C E P RP IV L
Sbjct: 240 ------VSKLXKICXNEDPAKRPKFDXIVPIL 265
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 44/196 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + SL +
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
+V E + + NLS+ +Q+ LD R G++++H +
Sbjct: 106 IVMELM-DANLSQ--------------VIQMELDHERMSYLLYQMLVGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISA 482
VD+++ G ++ E+I
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 53/258 (20%)
Query: 257 DKSVEFSY----EELSKA-TDNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVN-- 309
DK V+ SY +SK+ DN S ++G F + + G S ++C
Sbjct: 25 DKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIG-SGAQGIVCAAYD 83
Query: 310 -LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------ 355
+L + AIKK+ A R + EL ++ V+H N++ L+ + + +L
Sbjct: 84 AVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 142
Query: 356 FLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPV 405
+LV E ++ NL + +Q+ LD R G++++H +
Sbjct: 143 YLVMELMD-ANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI-- 185
Query: 406 YIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSP 465
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 186 -IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKE 242
Query: 466 KVDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 243 NVDIWSVGCIMGEMVRHK 260
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 17/138 (12%)
Query: 351 VEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRD 410
++G L++ I +L+ LR G P + + + SA + T HRD
Sbjct: 105 IDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGAT-----HRD 159
Query: 411 IKSANILIDKNFHAKVADFGLT------KLTEVGSASLPTRLVGTFGYMPPEYAQYGDVS 464
+K NIL+ + A + DFG+ KLT++G+ VGT Y PE +
Sbjct: 160 VKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT------VGTLYYXAPERFSESHAT 213
Query: 465 PKVDVYAFGVVLYELISA 482
+ D+YA VLYE ++
Sbjct: 214 YRADIYALTCVLYECLTG 231
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + +L +
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
LV E + + NL + +Q+ LD R G++++H +
Sbjct: 106 LVMELM-DANLXQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + +L +
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
LV E + + NL + +Q+ LD R G++++H +
Sbjct: 106 LVMELM-DANLXQ--------------VIQMELDHERMSYLLYQMLXGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + +L +
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
LV E ++ NL + +Q+ LD R G++++H +
Sbjct: 106 LVMELMD-ANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + +L +
Sbjct: 48 VLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 106
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
LV E + + NL + +Q+ LD R G++++H +
Sbjct: 107 LVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 148
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 149 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 207 VDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + +L +
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
LV E + + NL + +Q+ LD R G++++H +
Sbjct: 106 LVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + +L +
Sbjct: 48 VLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 106
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
LV E + + NL + +Q+ LD R G++++H +
Sbjct: 107 LVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 148
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 149 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 207 VDIWSVGCIMGEMVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + +L +
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
LV E + + NL + +Q+ LD R G++++H +
Sbjct: 106 LVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + +L +
Sbjct: 46 VLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 104
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
LV E + + NL + +Q+ LD R G++++H +
Sbjct: 105 LVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 146
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 147 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 204
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 205 VDIWSVGCIMGEMVRHK 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + +L +
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
LV E + + NL + +Q+ LD R G++++H +
Sbjct: 106 LVMELM-DANLXQ--------------VIQMELDHERMSYLLYQMLXGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 44/196 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + SL +
Sbjct: 48 ILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 106
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
+V E + + NL + +Q+ LD R G++++H +
Sbjct: 107 IVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 148
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 149 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 467 VDVYAFGVVLYELISA 482
VD+++ G ++ E+I
Sbjct: 207 VDIWSVGCIMGEMIKG 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + +L +
Sbjct: 41 VLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 99
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
LV E + + NL + +Q+ LD R G++++H +
Sbjct: 100 LVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 141
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 142 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 199
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 200 VDIWSVGCIMGEMVRHK 216
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + +L +
Sbjct: 41 VLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 99
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
LV E + + NL + +Q+ LD R G++++H +
Sbjct: 100 LVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 141
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 142 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 199
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 200 VDIWSVGCIMGEMVRHK 216
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 44/196 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + SL +
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
+V E + + NL + +Q+ LD R G++++H +
Sbjct: 106 IVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISA 482
VD+++ G ++ E+I
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + +L +
Sbjct: 40 VLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 98
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
LV E + + NL + +Q+ LD R G++++H +
Sbjct: 99 LVMELM-DANLXQ--------------VIQMELDHERMSYLLYQMLXGIKHLHSAGI--- 140
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 141 IHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 198
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 199 VDIWSVGCIMGEMVRHK 215
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + +L +
Sbjct: 40 VLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 98
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
LV E + + NL + +Q+ LD R G++++H +
Sbjct: 99 LVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 140
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 141 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 198
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 199 VDIWSVGCIMGEMVRHK 215
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 44/196 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + SL +
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
+V E + + NL + +Q+ LD R G++++H +
Sbjct: 106 IVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISA 482
VD+++ G ++ E+I
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 27/210 (12%)
Query: 294 RGEYGNSYLSRLICVNLLMQKAAIKKMD-----MQASREFLAELKVLTHVHHLNLVRLIG 348
RG YG+ Y ++ + A+K+++ M A RE +A L+ L H + ++L ++
Sbjct: 31 RGTYGHVYKAKRK-DGKDDKDYALKQIEGTGISMSACRE-IALLRELKHPNVISLQKVFL 88
Query: 349 YCVEGSLFLVYEYIENG--NLSEHLRGS--GRDP--LPWSSRVQIALDSARGLEYIHEHT 402
+ ++L+++Y E+ ++ + R S + P LP + G+ Y+H +
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 403 VPVYIHRDIKSANILI----DKNFHAKVADFGLTKLTEVGSASLP--TRLVGTFGYMPPE 456
V +HRD+K ANIL+ + K+AD G +L L +V TF Y PE
Sbjct: 149 V---LHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 205
Query: 457 Y---AQYGDVSPKVDVYAFGVVLYELISAK 483
A++ + +D++A G + EL++++
Sbjct: 206 LLLGARH--YTKAIDIWAIGCIFAELLTSE 233
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 125 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 180
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 220
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 44/196 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + SL +
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
+V E + + NL + +Q+ LD R G++++H +
Sbjct: 106 IVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISA 482
VD+++ G ++ E+I
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 128 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 183
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 184 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 223
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 129 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 184
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 224
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + SL +
Sbjct: 52 ILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 110
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
+V E + + NL + +Q+ LD R G++++H +
Sbjct: 111 IVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 152
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 153 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 210
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 211 VDLWSVGCIMGEMVCHK 227
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 172 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 227
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 267
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 129 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 184
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 224
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 172 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 227
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 267
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + SL +
Sbjct: 41 ILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 99
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
+V E + + NL + +Q+ LD R G++++H +
Sbjct: 100 IVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 141
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + T V T Y PE
Sbjct: 142 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKEN 199
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 200 VDLWSVGCIMGEMVCHK 216
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 130 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 185
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 225
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 157 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 212
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 252
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 130 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 185
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 225
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Query: 407 IHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSP 465
+HRDIK NILID N K+ DFG L + ++ T GT Y PPE+ +Y
Sbjct: 132 LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 466 K-VDVYAFGVVLYELISA------KEAIVKGN 490
+ V++ G++LY+++ E I++G
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 220
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 130 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 185
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 225
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 145 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 200
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 240
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 145 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 200
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 240
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 113/263 (42%), Gaps = 59/263 (22%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D + + H IG G +G V A + E R++ + +++ D+ + L E
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLE------KRVVAIKKILRVFE----DLIDCKRILRE 102
Query: 332 LKVLTHVHHLNLVRLIGYCVE------GSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRV 385
+ +L ++H ++V+++ + L++V E ++ + R P+ + + +
Sbjct: 103 IAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD-----FKKLFRTPV-YLTEL 156
Query: 386 QIA---LDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLT---EVGS 439
I + G++Y+H + +HRD+K AN L++++ KV DFGL + E G+
Sbjct: 157 HIKTLLYNLLVGVKYVHSAGI---LHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGN 213
Query: 440 ASLP-----------------------TRLVGTFGYMPPEYAQYGD-VSPKVDVYAFGVV 475
+ LP T V T Y PE + + +DV++ G +
Sbjct: 214 SQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCI 273
Query: 476 LYELISAKEAIVKGNGSSADSKG 498
EL++ ++K N + +G
Sbjct: 274 FAELLN----MIKENVAYHADRG 292
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 144 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 199
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 239
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 164 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 219
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 259
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 172 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 227
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 267
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 145 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 200
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 240
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 144 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 199
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 239
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 177 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 232
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 233 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 272
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 152 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 207
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA------KEAIVKGN 490
+Y + V++ G++LY+++ E I++G
Sbjct: 208 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 247
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 44/196 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + SL +
Sbjct: 49 ILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 107
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
+V E + + NL + +Q+ LD R G++++H +
Sbjct: 108 IVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 149
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + V T Y PE
Sbjct: 150 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRYYRAPEVILGMGYKEN 207
Query: 467 VDVYAFGVVLYELISA 482
VD+++ G ++ E+I
Sbjct: 208 VDIWSVGCIMGEMIKG 223
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 28/221 (12%)
Query: 273 NFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRL-ICVNLLMQKAAIKKMDMQASREFLAE 331
+ + +G+GGFG V+ G+ RL + + ++ + + + S E
Sbjct: 32 EYRLGPLLGKGGFGTVFA-------GHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLE 84
Query: 332 LKVLTHVH----HLNLVRLIGY--CVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRV 385
+ +L V H ++RL+ + EG + ++ + +L +++ G PL
Sbjct: 85 VALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSR 142
Query: 386 QIALDSARGLEYIHEHTVPVYIHRDIKSANILID-KNFHAKVADFGLTKLTEVGSASLPT 444
+++ H V +HRDIK NILID + AK+ DFG L T
Sbjct: 143 CFFGQVVAAIQHCHSRGV---VHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY---T 196
Query: 445 RLVGTFGYMPPEYA---QYGDVSPKVDVYAFGVVLYELISA 482
GT Y PPE+ QY + V++ G++LY+++
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALP--ATVWSLGILLYDMVCG 235
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 127/292 (43%), Gaps = 47/292 (16%)
Query: 242 GPAAGTPTSLNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEYGNSY 301
GP G+ SLNA + E K D F + GQG FG V G+ ++
Sbjct: 1 GP--GSMMSLNAAAA------ADERSRKEMDRFQVERMAGQGTFGTVQL----GKEKSTG 48
Query: 302 LSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVHHLNLVRLIGYCV--------EG 353
+S + + ++Q + ++Q + +L VL HH N+V+L Y +
Sbjct: 49 MS--VAIKKVIQDPRFRNRELQ----IMQDLAVL---HHPNIVQLQSYFYTLGERDRRDI 99
Query: 354 SLFLVYEYIENGNLSEHLRGSGRD---PLPWSSRVQIALDSARGLEYIHEHTVPVYIHRD 410
L +V EY+ + L R R P P +V R + +H +V V HRD
Sbjct: 100 YLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKV-FLFQLIRSIGCLHLPSVNV-CHRD 156
Query: 411 IKSANILIDK-NFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGD--VSPKV 467
IK N+L+++ + K+ DFG K ++ + + + Y PE +G+ + V
Sbjct: 157 IKPHNVLVNEADGTLKLCDFGSAK--KLSPSEPNVAYICSRYYRAPELI-FGNQHYTTAV 213
Query: 468 DVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLPDPIEDLRKL 519
D+++ G + E++ E I +G+ S+ +V VL P E LRKL
Sbjct: 214 DIWSVGCIFAEMMLG-EPIFRGDNSAGQLHEIV----RVLGCPS-REVLRKL 259
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 158 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 213
Query: 458 AQYGDVSPK-VDVYAFGVVLYELI 480
+Y + V++ G++LY+++
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 157 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 212
Query: 458 AQYGDVSPK-VDVYAFGVVLYELI 480
+Y + V++ G++LY+++
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 125 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 180
Query: 458 AQYGDVSPK-VDVYAFGVVLYELISA 482
+Y + V++ G++LY+++
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 158 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 213
Query: 458 AQYGDVSPK-VDVYAFGVVLYELI 480
+Y + V++ G++LY+++
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 158 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 213
Query: 458 AQYGDVSPK-VDVYAFGVVLYELI 480
+Y + V++ G++LY+++
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 158 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 213
Query: 458 AQYGDVSPK-VDVYAFGVVLYELI 480
+Y + V++ G++LY+++
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 157 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 212
Query: 458 AQYGDVSPK-VDVYAFGVVLYELI 480
+Y + V++ G++LY+++
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 399 HEHTVPVYIHRDIKSANILIDKNF-HAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEY 457
H H V +HRDIK NILID N K+ DFG L + ++ T GT Y PPE+
Sbjct: 157 HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEW 212
Query: 458 AQYGDVSPK-VDVYAFGVVLYELI 480
+Y + V++ G++LY+++
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 280 IGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAELKVLTHVH 339
IG G FG V+ A+L + + AIKK+ +Q R EL+++ V
Sbjct: 48 IGNGSFGVVFQAKL----------------VESDEVAIKKV-LQDKRFKNRELQIMRIVK 90
Query: 340 HLNLVRLIGYCV-------EGSLFLVYEYIENG--NLSEHLRGSGRDPLPWSSRVQIALD 390
H N+V L + E L LV EY+ S H + +P
Sbjct: 91 HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHY-AKLKQTMPMLLIKLYMYQ 149
Query: 391 SARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSASLPTRLVGT 449
R L YIH + HRDIK N+L+D K+ DFG K+ G ++ + +
Sbjct: 150 LLRSLAYIHSIGI---CHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV--SXICS 204
Query: 450 FGYMPPEYAQYG--DVSPKVDVYAFGVVLYELISAK 483
Y PE +G + + +D+++ G V+ EL+ +
Sbjct: 205 RYYRAPELI-FGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + SL +
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
+V E + + NL + +Q+ LD R G++++H +
Sbjct: 106 IVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 206 VDIWSVGCIMGEMVCHK 222
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 15/181 (8%)
Query: 316 AIKKMDMQASREFLAELKVL-THVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRG 373
A+K +D ++ R+ E+++L + H N++ L +G ++LV E + G L + +
Sbjct: 56 AVKVID-KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL- 113
Query: 374 SGRDPLPWSSRVQIALDS-ARGLEYIHEHTVPVYIHRDIKSANIL-IDKNFHA---KVAD 428
R L + + +EY+H V +HRD+K +NIL +D++ + ++ D
Sbjct: 114 --RQKFFSEREASFVLHTIGKTVEYLHSQGV---VHRDLKPSNILYVDESGNPECLRICD 168
Query: 429 FGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
FG K + L T T ++ PE + D+++ G++LY +++
Sbjct: 169 FGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
Query: 489 G 489
G
Sbjct: 228 G 228
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 44/197 (22%)
Query: 310 LLMQKAAIKKM------DMQASREFLAELKVLTHVHHLNLVRLIG-YCVEGSL------F 356
+L + AIKK+ A R + EL ++ V+H N++ L+ + + SL +
Sbjct: 47 ILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 105
Query: 357 LVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSAR----------GLEYIHEHTVPVY 406
+V E + + NL + +Q+ LD R G++++H +
Sbjct: 106 IVMELM-DANLCQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGI--- 147
Query: 407 IHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPK 466
IHRD+K +NI++ + K+ DFGL + G++ + V T Y PE
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYYRAPEVILGMGYKEN 205
Query: 467 VDVYAFGVVLYELISAK 483
VD+++ G ++ E++ K
Sbjct: 206 VDLWSVGCIMGEMVCHK 222
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 15/181 (8%)
Query: 316 AIKKMDMQASREFLAELKVL-THVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRG 373
A+K +D ++ R+ E+++L + H N++ L +G ++LV E + G L + +
Sbjct: 56 AVKVID-KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL- 113
Query: 374 SGRDPLPWSSRVQIALDS-ARGLEYIHEHTVPVYIHRDIKSANIL-IDKNFHA---KVAD 428
R L + + +EY+H V +HRD+K +NIL +D++ + ++ D
Sbjct: 114 --RQKFFSEREASFVLHTIGKTVEYLHSQGV---VHRDLKPSNILYVDESGNPECLRICD 168
Query: 429 FGLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVK 488
FG K + L T T ++ PE + D+++ G++LY +++
Sbjct: 169 FGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
Query: 489 G 489
G
Sbjct: 228 G 228
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 386 QIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGLTKLTEVGSASLPTR 445
+IA+ + LE++H IHRD+K +N+LI+ K+ DFG++ A T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK--TI 212
Query: 446 LVGTFGYMPPEYA-----QYGDVSPKVDVYAFGVVLYEL 479
G YM PE Q G S K D+++ G+ + EL
Sbjct: 213 DAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIEL 250
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVE------GSLFLVYEYIENGNLSEHLRGSGRDPL 379
+ L E+++L H HH N++ L V L+LV E + +L++ +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIH------- 125
Query: 380 PWSSRVQIALDSAR--------GLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL 431
R+ I+ + GL +HE V +HRD+ NIL+ N + DF L
Sbjct: 126 --DQRIVISPQHIQYFMYHILLGLHVLHEAGV---VHRDLHPGNILLADNNDITICDFNL 180
Query: 432 TKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+ E + + T V Y PE Q+ + VD+++ G V+ E+ + K A+ +G+
Sbjct: 181 AR--EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK-ALFRGS 237
Query: 491 GSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGD 526
+V EV+ P IED+ P D
Sbjct: 238 TFYNQLNKIV----EVVGTP-KIEDVVMFSSPSARD 268
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 326 REFLAELKVLTHVHHLNLVRLIGYCVE------GSLFLVYEYIENGNLSEHLRGSGRDPL 379
+ L E+++L H HH N++ L V L+LV E + +L++ +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIH------- 125
Query: 380 PWSSRVQIALDSAR--------GLEYIHEHTVPVYIHRDIKSANILIDKNFHAKVADFGL 431
R+ I+ + GL +HE V +HRD+ NIL+ N + DF L
Sbjct: 126 --DQRIVISPQHIQYFMYHILLGLHVLHEAGV---VHRDLHPGNILLADNNDITICDFNL 180
Query: 432 TKLTEVGSASLPTRLVGTFGYMPPEYA-QYGDVSPKVDVYAFGVVLYELISAKEAIVKGN 490
+ E + + T V Y PE Q+ + VD+++ G V+ E+ + K A+ +G+
Sbjct: 181 AR--EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK-ALFRGS 237
Query: 491 GSSADSKGLVALFEEVLNLPDPIEDLRKLVDPRLGD 526
+V EV+ P IED+ P D
Sbjct: 238 TFYNQLNKIV----EVVGTP-KIEDVVMFSSPSARD 268
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 13/180 (7%)
Query: 316 AIKKMDMQASREFLAELKVL-THVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRG 373
A+K +D ++ R+ E+++L + H N++ L +G +++V E ++ G L + +
Sbjct: 51 AVKIID-KSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR 109
Query: 374 SGRDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANIL-IDKNFHA---KVADF 429
+S V + + +EY+H V +HRD+K +NIL +D++ + ++ DF
Sbjct: 110 QKFFSEREASAVLFTI--TKTVEYLHAQGV---VHRDLKPSNILYVDESGNPESIRICDF 164
Query: 430 GLTKLTEVGSASLPTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKG 489
G K + L T T ++ PE + D+++ GV+LY +++ G
Sbjct: 165 GFAKQLRAENGLLMTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANG 223
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 110/256 (42%), Gaps = 22/256 (8%)
Query: 272 DNFSMSHKIGQGGFGAVYYAELRGEYGNSYLSRLICVNLLMQKAAIKKMDMQASREFLAE 331
D++ + K+G+G + V+ E N + + V +L +KK ++ + L
Sbjct: 37 DDYQLVRKLGRGKYSEVF------EAINITNNEKVVVKIL---KPVKKNKIKREIKILEN 87
Query: 332 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDS 391
L+ ++ + L ++ V + LV+E++ N + + L + D + R + +
Sbjct: 88 LRGGPNI--ITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTD---YDIRFYM-YEI 140
Query: 392 ARGLEYIHEHTVPVYIHRDIKSANILIDKNFHA-KVADFGLTKLTEVGSASLPTRLVGTF 450
+ L+Y H + +HRD+K N++ID ++ D+GL + G R+ +
Sbjct: 141 LKALDYCHSMGI---MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-EYNVRVASRY 196
Query: 451 GYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKGNGSSADSKGLVALFEEVLNLP 510
P Y +D+++ G +L +I KE G+ + D +A +L
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH-DNYDQLVRIAKVLGTEDLY 255
Query: 511 DPIEDLRKLVDPRLGD 526
D I+ +DPR D
Sbjct: 256 DYIDKYNIELDPRFND 271
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,417,918
Number of Sequences: 62578
Number of extensions: 731689
Number of successful extensions: 4610
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 207
Number of HSP's that attempted gapping in prelim test: 1839
Number of HSP's gapped (non-prelim): 1125
length of query: 589
length of database: 14,973,337
effective HSP length: 104
effective length of query: 485
effective length of database: 8,465,225
effective search space: 4105634125
effective search space used: 4105634125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)