BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037011
(103 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NMQ7|GASA6_ARATH Gibberellin-regulated protein 6 OS=Arabidopsis thaliana GN=GASA6
PE=3 SV=1
Length = 101
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 69/103 (66%), Positives = 76/103 (73%), Gaps = 2/103 (1%)
Query: 1 MAKAKLVFVLLVAALFSISIVMATETQNLLDTNGYGPGSLKSYQCPSQCTRRCSQTQYHK 60
MAK F+LL + + M+ E + YGPGSLKSYQC QCTRRCS T+YHK
Sbjct: 1 MAKLITSFLLLTILFTFVCLTMSKEAE--YHPESYGPGSLKSYQCGGQCTRRCSNTKYHK 58
Query: 61 PCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 103
PCMFFCQKCCAKCLCVPPG YGNK VCPCYNNWKT+ GGPKCP
Sbjct: 59 PCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101
>sp|P46690|GASA4_ARATH Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4
PE=1 SV=2
Length = 106
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 78/106 (73%), Gaps = 3/106 (2%)
Query: 1 MAKA-KLVFVLLVAALFSI-SIVMATETQNL-LDTNGYGPGSLKSYQCPSQCTRRCSQTQ 57
MAK+ +F+L + LF + ++VMA+ N+ YGPGSLK QCPS+C RRC +TQ
Sbjct: 1 MAKSYGAIFLLTLIVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQ 60
Query: 58 YHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 103
YHK C+ FC KCC KCLCVPPG+YGNK VC CYNNWKT+ GGPKCP
Sbjct: 61 YHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106
>sp|P27057|GAST1_SOLLC Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1
Length = 112
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 52/70 (74%)
Query: 34 GYGPGSLKSYQCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNW 93
G G L C +CT RCS+T Y KPCMFFCQKCCAKCLCVP G YGNK CPCYNNW
Sbjct: 43 GVSEGRLHPQDCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNW 102
Query: 94 KTKSGGPKCP 103
KTK GGPKCP
Sbjct: 103 KTKRGGPKCP 112
>sp|P47926|RSI1_SOLLC Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1
Length = 96
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 59/94 (62%), Gaps = 8/94 (8%)
Query: 10 LLVAALFSISIVMATETQNLLDTNGYGPGSLKSYQCPSQCTRRCSQTQYHKPCMFFCQKC 69
LL+ ++F I + + + G L+ C +CT RCS T + KPCMFFCQKC
Sbjct: 11 LLLISMFLILLTFSNVVE--------GYNKLRPTDCKPRCTYRCSATSHKKPCMFFCQKC 62
Query: 70 CAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 103
CA CLCVP G YGNK CPCYNNWKT+ G PKCP
Sbjct: 63 CATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96
>sp|Q6GKX7|GASAC_ARATH Gibberellin-regulated protein 12 OS=Arabidopsis thaliana GN=GASA12
PE=3 SV=1
Length = 106
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 1 MAKAKLVFV---LLVAALFSISIVMATETQNLLDTNGYGPGSLKSYQCPSQCTRRCSQTQ 57
M K +VFV LL A FS + ++ Q G GSLK +CP C RCS T
Sbjct: 1 MMKLIVVFVISSLLFATQFSNGDELESQAQAPAIHKNGGEGSLKPEECPKACEYRCSATS 60
Query: 58 YHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 103
+ KPC+FFC KCC KCLCVP G YG+K CPCYNNW TK GGPKCP
Sbjct: 61 HRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106
>sp|A8MR46|GASAD_ARATH Gibberellin-regulated protein 13 OS=Arabidopsis thaliana GN=GASA13
PE=3 SV=1
Length = 103
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 50/60 (83%)
Query: 44 QCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 103
+C +C RCS TQY KPC+FFC KCC KCLCVPPG YGNK VCPCYNNWKTKSGGPKCP
Sbjct: 44 ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103
>sp|Q84J95|GASA5_ARATH Gibberellin-regulated protein 5 OS=Arabidopsis thaliana GN=GASA5
PE=2 SV=1
Length = 97
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 52/68 (76%)
Query: 36 GPGSLKSYQCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKT 95
G G LK QC S+C+ RCS T + KPCMFFC KCC KCLCVPPG +GNK CPCYNNWKT
Sbjct: 30 GGGKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKT 89
Query: 96 KSGGPKCP 103
K G PKCP
Sbjct: 90 KEGRPKCP 97
>sp|O80641|GASA8_ARATH Gibberellin-regulated protein 8 OS=Arabidopsis thaliana
GN=At2g39540 PE=2 SV=1
Length = 87
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 10 LLVAALFSISIVMATETQNLLDTNGYGPGSLKSYQCPSQCTRRCSQTQYHKPCMFFCQKC 69
L+V F IS+++ T+ + S C +C RCS+ H+ C+ +C C
Sbjct: 3 LVVVQFFIISLLL---------TSSFSVLSSADSSCGGKCNVRCSKAGQHEECLKYCNIC 53
Query: 70 CAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 103
C KC CVP G +G+K CPCY + K GG KCP
Sbjct: 54 CQKCNCVPSGTFGHKDECPCYRDMKNSKGGSKCP 87
>sp|P86888|PMLN_PRUPE Peamaclein OS=Prunus persica PE=1 SV=1
Length = 63
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 37/59 (62%)
Query: 45 CPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 103
C S+C RCS+ Y + C+ +C CC KC CVP G YGNK CPCY + K G PKCP
Sbjct: 5 CDSKCGVRCSKAGYQERCLKYCGICCEKCHCVPSGTYGNKDECPCYRDLKNSKGNPKCP 63
>sp|Q8GWK5|GASA9_ARATH Gibberellin-regulated protein 9 OS=Arabidopsis thaliana GN=GASA9
PE=2 SV=1
Length = 119
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 6 LVFVLLVAALFSISIVMATETQNLLDTNGYGPGSL--KSYQ------CPSQCTRRCSQTQ 57
+ F+LL L +S ET ++ TN + ++Y C C RRCS+T
Sbjct: 14 ISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACARRCSKTS 73
Query: 58 YHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 103
K C C CCAKC CVPPG GN A CPCY + +T KCP
Sbjct: 74 RKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119
>sp|Q948Z4|SNAK1_SOLTU Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1
Length = 88
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 34/59 (57%)
Query: 45 CPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 103
C S+C RCS+ C+ +C CC +C CVP G YGNK CPCY + K G KCP
Sbjct: 30 CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88
>sp|Q8LFM2|GASAA_ARATH Gibberellin-regulated protein 10 OS=Arabidopsis thaliana GN=GASA10
PE=2 SV=1
Length = 89
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 7 VFVLLVAALFSISIVMATETQNLLDTNGYGPGSLKSYQCPSQCTRRCSQTQYHKPCMFFC 66
V VL+++ L + S+ +L T P C +C RCS+ C+ +C
Sbjct: 6 VKVLIISLLITSSLF-------ILSTADSSP-------CGGKCNVRCSKAGRQDRCLKYC 51
Query: 67 QKCCAKC-LCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 103
CC KC CVP G YGNK CPCY + K G KCP
Sbjct: 52 NICCEKCNYCVPSGTYGNKDECPCYRDMKNSKGTSKCP 89
>sp|P46687|GASA3_ARATH Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3
PE=2 SV=1
Length = 99
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 16 FSISIVMATETQNLLDTNGYGPGSLKSYQCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLC 75
F + + A ++Q G G +K C +C RCS++ C+ C CC +C C
Sbjct: 20 FELHVHAAEDSQ-------VGEGVVK-IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNC 71
Query: 76 VPPGFYGNKAVCPCYNNWKTKSGGPKCP 103
VPPG GN +CPCY + T+ G KCP
Sbjct: 72 VPPGTAGNHHLCPCYASITTRGGRLKCP 99
>sp|Q93X17|SNAK2_SOLTU Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1
Length = 104
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 1 MAKAKLVFVLLVAALFSISIVMATETQ----NLLDTNGYGPGSLKSYQCPSQCTRRCSQT 56
MA +K +F L+ +L + V + +T N + Y S K C C RC +
Sbjct: 1 MAISKALFASLLLSLLLLEQVQSIQTDQVTSNAISEAAY---SYKKIDCGGACAARCRLS 57
Query: 57 QYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 103
+ C C CCA+C CVPPG GN CPCY + T KCP
Sbjct: 58 SRPRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104
>sp|P46689|GASA1_ARATH Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1
PE=2 SV=2
Length = 98
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 24 TETQNLLDTNGYGPGSLKSYQCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGN 83
+ +N NGY K C S C RC ++ + C C CC +C CVPPG YGN
Sbjct: 23 ADVENSQKKNGYA----KKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGN 78
Query: 84 KAVCPCYNNWKTKSGGPKCP 103
C CY + T G KCP
Sbjct: 79 YDKCQCYASLTTHGGRRKCP 98
>sp|Q9LFR3|GASAE_ARATH Gibberellin-regulated protein 14 OS=Arabidopsis thaliana GN=GASA14
PE=1 SV=1
Length = 275
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 44 QCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVC-PCYNNWKTKSGGPKC 102
C C RC Q CM C CC +C CVPPG YGNK C CY N KT+ G KC
Sbjct: 215 DCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSKC 274
Query: 103 P 103
P
Sbjct: 275 P 275
>sp|O82328|GASA7_ARATH Gibberellin-regulated protein 7 OS=Arabidopsis thaliana GN=GASA7
PE=3 SV=1
Length = 108
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%)
Query: 45 CPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 103
C +C RC + C+ +C CC C CVP G YGNK C CY + + G PKCP
Sbjct: 50 CGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108
>sp|F4IQJ4|GASAB_ARATH Gibberellin-regulated protein 11 OS=Arabidopsis thaliana GN=GASA11
PE=3 SV=1
Length = 94
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 31/60 (51%)
Query: 44 QCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 103
C S+C RCS + C C CCA+C CV PG GN CPCY + T G KCP
Sbjct: 35 DCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94
>sp|P46688|GASA2_ARATH Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2
PE=2 SV=1
Length = 99
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 31 DTNGYGPGSLKSYQCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCY 90
D G G +K C +C RCS++ K C+ C CC++C CVPPG GN +CPCY
Sbjct: 28 DGAKVGEGVVK-IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCY 86
Query: 91 NNWKTKSGGPKCP 103
+ T G KCP
Sbjct: 87 ASITTHGGRLKCP 99
>sp|Q5IXF8|GLP2R_MOUSE Glucagon-like peptide 2 receptor OS=Mus musculus GN=Glp2r PE=2
SV=2
Length = 512
Score = 33.1 bits (74), Expect = 0.55, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 38 GSL--KSYQCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAV-CPCYNNWK 94
GSL ++ Q +Q C + KP FC K +C P F GN +V CP Y W
Sbjct: 26 GSLLEETVQKWAQYKETCLKDLLEKPSGVFCNGTFDKYVCWPHSFPGNVSVPCPSYLPWW 85
Query: 95 TK 96
K
Sbjct: 86 NK 87
>sp|Q1E5A9|LMBD1_COCIM Probable lysosomal cobalamin transporter OS=Coccidioides immitis
(strain RS) GN=CIMG_02254 PE=3 SV=1
Length = 584
Score = 32.3 bits (72), Expect = 0.92, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 4 AKLVFVLLVAAL-FSISIVMATETQNLLDTNGYGPGSLKSY-QCPSQCTRRCSQ-TQYHK 60
A ++ L+ AL +SIS+++ + YGP + Y P+ CS+ +Y K
Sbjct: 421 ATVMLTLITLALNYSISMIVVPQYAT------YGPQTFCDYPSIPASAPLDCSKHKEYLK 474
Query: 61 PCMFFCQKCCAKCLCVP 77
PC AK +C P
Sbjct: 475 PCSELANNPAAKAVCTP 491
>sp|P59222|SREC2_MOUSE Scavenger receptor class F member 2 OS=Mus musculus GN=Scarf2 PE=1
SV=1
Length = 833
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 14/69 (20%)
Query: 35 YGPGSLKSYQCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWK 94
YGPG C RRC Q + +PC +CL PG+ G K PC +
Sbjct: 270 YGPG----------CRRRCGQCKGQQPCTVVE----GRCLTCEPGWNGTKCDQPCATGFY 315
Query: 95 TKSGGPKCP 103
+ G +CP
Sbjct: 316 GEGCGHRCP 324
>sp|Q9DER5|TEN2_CHICK Teneurin-2 OS=Gallus gallus GN=TENM2 PE=1 SV=1
Length = 2802
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
Query: 66 CQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKC 102
C K LC G Y +K C CY+ WK GP+C
Sbjct: 630 CAKAACPVLCSGNGQY-SKGTCLCYSGWK----GPEC 661
>sp|Q3V3A7|RN207_MOUSE RING finger protein 207 OS=Mus musculus GN=Rnf207 PE=2 SV=2
Length = 635
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 10/51 (19%)
Query: 27 QNLLDTNGYGPGSLKSYQCPSQCTRRCSQTQYHKPCMFFCQKC----CAKC 73
Q L+D++G G +++ C +C+++ ++T Y FC C CA+C
Sbjct: 83 QFLVDSSGDGSEAVRCANCDLECSQQDAETTY------FCNTCGQPLCARC 127
>sp|Q66IN2|QSER1_XENLA Glutamine and serine-rich protein 1 OS=Xenopus laevis GN=qser1 PE=2
SV=2
Length = 1673
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 18 ISIVMATETQNLLDTNGYGPGSLKSYQCPSQCTRRCSQT 56
+S+ ++ +++ + GY P S KS CP++ R S+T
Sbjct: 254 VSVELSQSYPSVIPSPGYPPSSTKSKNCPTKAPPRSSKT 292
>sp|A3QP00|TS1R2_PONPY Taste receptor type 1 member 2 OS=Pongo pygmaeus GN=TAS1R2 PE=3
SV=1
Length = 839
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 10/58 (17%)
Query: 47 SQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKA-------VCPCYNNWKTKS 97
S C++RC Q KP CC +C+ PG + N CP N W +S
Sbjct: 493 SMCSKRCQSGQKKKPVGI--HVCCFECIDCLPGTFLNHTEDEYECQACPS-NEWSYQS 547
>sp|Q1I180|SCX1_TITDI Putative beta-neurotoxin Td1 OS=Tityus discrepans PE=1 SV=2
Length = 86
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 6 LVFVLLVAALFSISIVMATETQNLLDTNGYGPGSLK--SYQCPSQCTRRCSQTQY 58
+ F+L ++ F I +V+ + L++ NG G L + CP++C+R + Y
Sbjct: 2 IRFILFISCFFLIGMVIECKDGYLMEPNGCKRGCLTRPARYCPNECSRLKGKDGY 56
>sp|A3QP08|TS1R2_SAISC Taste receptor type 1 member 2 OS=Saimiri sciureus GN=TAS1R2 PE=3
SV=1
Length = 834
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 47 SQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKA-------VCPCYNNWKTKS 97
S C++RC Q KP CC +C+ PPG + N+ CP N W +S
Sbjct: 488 SMCSKRCQSGQKKKPVG--IHTCCFECIDCPPGTFLNQTANEYDCQACPS-NEWSHQS 542
>sp|A3QNZ9|TS1R2_GORGO Taste receptor type 1 member 2 OS=Gorilla gorilla gorilla GN=TAS1R2
PE=3 SV=1
Length = 839
Score = 29.3 bits (64), Expect = 7.0, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 10/58 (17%)
Query: 47 SQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKA-------VCPCYNNWKTKS 97
S C++RC Q KP CC +C+ PG + N CP N W +S
Sbjct: 493 SMCSKRCQSGQKKKPVGI--HVCCFECIDCLPGTFLNHTEDEYECQACP-NNEWSYQS 547
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.137 0.480
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,666,714
Number of Sequences: 539616
Number of extensions: 1408415
Number of successful extensions: 4261
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 4169
Number of HSP's gapped (non-prelim): 130
length of query: 103
length of database: 191,569,459
effective HSP length: 72
effective length of query: 31
effective length of database: 152,717,107
effective search space: 4734230317
effective search space used: 4734230317
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)