Your job contains 1 sequence.
>037014
MAYAQSISFCGKIIETTVTSTTSVAENWLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGK
IATLQLCVDTKCLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEYGLCIKK
KIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACI
DAYVSCAIGTKLLLEETQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037014
(198 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2053519 - symbol:AT2G36110 species:3702 "Arabi... 195 1.6e-15 1
TAIR|locus:2092497 - symbol:AT3G12420 species:3702 "Arabi... 156 4.9e-14 2
TAIR|locus:2119525 - symbol:WRNEXO "Werner syndrome-like ... 178 1.4e-13 1
TAIR|locus:2092472 - symbol:AT3G12470 species:3702 "Arabi... 161 6.4e-12 1
ZFIN|ZDB-GENE-070702-2 - symbol:wrn "Werner syndrome" spe... 169 3.3e-11 1
TAIR|locus:2092482 - symbol:AT3G12410 species:3702 "Arabi... 135 2.3e-10 2
FB|FBgn0037901 - symbol:CG6744 species:7227 "Drosophila m... 153 5.1e-10 1
UNIPROTKB|O93530 - symbol:wrn "Werner syndrome ATP-depend... 148 5.7e-09 1
UNIPROTKB|F1NAR0 - symbol:F1NAR0 "Uncharacterized protein... 144 1.4e-08 1
ZFIN|ZDB-GENE-030131-6387 - symbol:exd2 "exonuclease 3'-5... 137 8.7e-08 1
TAIR|locus:2092457 - symbol:AT3G12460 species:3702 "Arabi... 124 9.8e-08 2
TAIR|locus:2092442 - symbol:AT3G12440 species:3702 "Arabi... 134 1.7e-07 1
TAIR|locus:2092507 - symbol:AT3G12430 species:3702 "Arabi... 119 4.9e-07 2
UNIPROTKB|Q14191 - symbol:WRN "Werner syndrome ATP-depend... 135 8.2e-07 1
UNIPROTKB|F1RX70 - symbol:WRN "Uncharacterized protein" s... 134 1.2e-06 1
UNIPROTKB|I3LC91 - symbol:WRN "Uncharacterized protein" s... 134 1.3e-06 1
MGI|MGI:109635 - symbol:Wrn "Werner syndrome homolog (hum... 133 1.7e-06 1
UNIPROTKB|Q9NVH0 - symbol:EXD2 "Exonuclease 3'-5' domain-... 129 3.0e-06 1
UNIPROTKB|J9NWB3 - symbol:EXD2 "Uncharacterized protein" ... 128 3.7e-06 1
UNIPROTKB|E2QXX4 - symbol:EXD2 "Uncharacterized protein" ... 128 4.1e-06 1
DICTYBASE|DDB_G0278593 - symbol:exdl2B "3'-5' exonuclease... 127 6.3e-06 1
UNIPROTKB|F1S4B8 - symbol:EXD2 "Uncharacterized protein" ... 126 8.0e-06 1
RGD|1311087 - symbol:Exd2 "exonuclease 3'-5' domain conta... 125 1.1e-05 1
TAIR|locus:2095994 - symbol:AT3G62320 species:3702 "Arabi... 113 1.4e-05 1
TAIR|locus:2156243 - symbol:AT5G48350 species:3702 "Arabi... 116 1.4e-05 1
RGD|1564788 - symbol:Wrn "Werner syndrome, RecQ helicase-... 127 1.6e-05 1
UNIPROTKB|E1BEE6 - symbol:WRN "Uncharacterized protein" s... 124 4.0e-05 1
UNIPROTKB|B3LWP6 - symbol:WRNexo "Werner Syndrome-like ex... 116 6.9e-05 1
UNIPROTKB|E1BEQ0 - symbol:EXD2 "Uncharacterized protein" ... 117 0.00012 1
DICTYBASE|DDB_G0278079 - symbol:exdl2A "3'-5' exonuclease... 116 0.00020 1
UNIPROTKB|B4JF25 - symbol:WRNexo "Werner Syndrome-like ex... 112 0.00020 1
UNIPROTKB|B4G5C9 - symbol:WRNexo "Werner Syndrome-like ex... 112 0.00022 1
UNIPROTKB|Q299L3 - symbol:WRNexo "Werner Syndrome-like ex... 112 0.00023 1
UNIPROTKB|E1BXG2 - symbol:EXD2 "Uncharacterized protein" ... 114 0.00029 1
UNIPROTKB|C9JLF4 - symbol:EXD2 "Exonuclease 3'-5' domain-... 89 0.00056 1
>TAIR|locus:2053519 [details] [associations]
symbol:AT2G36110 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA;ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 EMBL:CP002685 GO:GO:0016740
GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
EMBL:AC007135 EMBL:AY649245 IPI:IPI00518056 PIR:A84777
RefSeq:NP_181155.1 UniGene:At.37587 ProteinModelPortal:Q9SIH3
SMR:Q9SIH3 PRIDE:Q9SIH3 EnsemblPlants:AT2G36110.1 GeneID:818184
KEGG:ath:AT2G36110 TAIR:At2g36110 InParanoid:Q9SIH3 OMA:FRHQLEI
PhylomeDB:Q9SIH3 ProtClustDB:CLSN2913262 Genevestigator:Q9SIH3
Uniprot:Q9SIH3
Length = 239
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 59/192 (30%), Positives = 90/192 (46%)
Query: 7 ISFCGKIIEXXXXXXXXXAENWLLKIR---SLHSAQILIVGLNCKWKP---HPIPSLSGK 60
I F G+ + W+ IR L S+ L+VGL+ +W P P P +
Sbjct: 19 IDFFGERLIVTVTHTTSTIRRWIHSIRFFSRLRSSHPLVVGLDVQWTPGGSDPPPDI--- 75
Query: 61 IATLQLCVDTKCLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKN-EYGLCIK 119
LQLCV +CLI+QL + IP +++FL D + FVG+ + KL+ + L I
Sbjct: 76 ---LQLCVGNRCLIIQLSHCKRIPEVLRSFLEDETITFVGVWNSQDQGKLERFRHQLEIW 132
Query: 120 KKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFAC 179
+ +D+R S K + L Y+ +R K K++CM+N + L + I A
Sbjct: 133 RLLDIRHYLPTRLLNSSFEKIVEECLGYKGVR----KDKEICMSNWGARSLSHDQIVQAS 188
Query: 180 IDAYVSCAIGTK 191
D YV C +G K
Sbjct: 189 DDVYVCCKLGVK 200
>TAIR|locus:2092497 [details] [associations]
symbol:AT3G12420 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR012337 EMBL:CP002686
GO:GO:0003676 GO:GO:0004527 SUPFAM:SSF53098 IPI:IPI01020114
RefSeq:NP_187848.2 UniGene:At.74525 ProteinModelPortal:F4J9R7
EnsemblPlants:AT3G12420.1 GeneID:820421 KEGG:ath:AT3G12420
Uniprot:F4J9R7
Length = 185
Score = 156 (60.0 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 35/80 (43%), Positives = 53/80 (66%)
Query: 51 PHPIPSLSGKIATLQLCVDTKCLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKL 110
PHP P+ TLQLCV +CLI+QL + D +P S+++FL+DPN FVG+ + KL
Sbjct: 106 PHP-PA-----DTLQLCVGNQCLIIQLCHCDQVPTSLRSFLTDPNTTFVGVWNSQDAGKL 159
Query: 111 -KNEYGLCIKKKIDVRTLAK 129
++++ L I K +D+RT A+
Sbjct: 160 ARSKHQLEIGKLLDIRTEAR 179
Score = 38 (18.4 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 39 QILIVGLNCKWKPHPI 54
Q L+VG+ +W P P+
Sbjct: 55 QPLVVGVGVQWTP-PV 69
>TAIR|locus:2119525 [details] [associations]
symbol:WRNEXO "Werner syndrome-like exonuclease"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA;ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677
SUPFAM:SSF53098 GO:GO:0008408 EMBL:AL035528 EMBL:AL161537
EMBL:AJ404476 EMBL:AF531179 EMBL:BT010908 EMBL:AY530745
IPI:IPI00525961 IPI:IPI00547001 PIR:T05256 RefSeq:NP_193123.2
RefSeq:NP_974543.1 UniGene:At.2728 UniGene:At.33330
UniGene:At.45865 ProteinModelPortal:Q84LH3 SMR:Q84LH3 IntAct:Q84LH3
STRING:Q84LH3 EnsemblPlants:AT4G13870.2 GeneID:827021
KEGG:ath:AT4G13870 TAIR:At4g13870 eggNOG:NOG266861
HOGENOM:HOG000240617 InParanoid:Q84LH3 OMA:ICIDNDA PhylomeDB:Q84LH3
ProtClustDB:CLSN2690907 Genevestigator:Q84LH3 Uniprot:Q84LH3
Length = 288
Score = 178 (67.7 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 54/184 (29%), Positives = 91/184 (49%)
Query: 6 SISFCGKIIEXXXXXXXXXAENWLLKIRSLHSAQ--ILIVGLNCKWKPHPIPS-LSGKIA 62
++ F G+I+ L+K+ + I VGL+ +W+P L GK+A
Sbjct: 91 AMRFGGRILYSKTATEVDKRAMQLIKVLDTKRDESGIAFVGLDIEWRPSFRKGVLPGKVA 150
Query: 63 TLQLCVDTK-CLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEYGLCIKKK 121
T+Q+CVD+ C ++ + + IP S+++ + D +V VGI ++ KL ++YG+ IK
Sbjct: 151 TVQICVDSNYCDVMHIFHSG-IPQSLQHLIEDSTLVKVGIGIDGDSVKLFHDYGVSIKDV 209
Query: 122 IDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
D+ LA I K GL L L+ KP ++ + N E L + +++A D
Sbjct: 210 EDLSDLANQK--IGGDKKWGLASLTETLVCKELLKPNRIRLGNWEFYPLSKQQLQYAATD 267
Query: 182 AYVS 185
AY S
Sbjct: 268 AYAS 271
>TAIR|locus:2092472 [details] [associations]
symbol:AT3G12470 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002686 GO:GO:0003676
GO:GO:0004527 SUPFAM:SSF53098 EMBL:AP002047 EMBL:AC069474
EMBL:BT025648 IPI:IPI00521942 RefSeq:NP_566424.1 UniGene:At.39591
ProteinModelPortal:Q9LHG1 SMR:Q9LHG1 IntAct:Q9LHG1
EnsemblPlants:AT3G12470.1 GeneID:820426 KEGG:ath:AT3G12470
TAIR:At3g12470 InParanoid:Q9LHG1 OMA:GSRCLII PhylomeDB:Q9LHG1
ProtClustDB:CLSN2914969 Genevestigator:Q9LHG1 Uniprot:Q9LHG1
Length = 220
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 41/128 (32%), Positives = 63/128 (49%)
Query: 7 ISFCGKIIEXXXXXXXXXAENWLLKIRSL---HSAQILIVGLNCKWKPHPI-PSLSGKIA 62
+ F G + W+ +RS HS L+VG+ +W+P P K
Sbjct: 19 VDFFGDDLIVTVTPTASVIRRWIRSVRSYNRNHSVHPLVVGIGVQWRPDSSDPDPPPK-- 76
Query: 63 TLQLCVDTKCLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKL-KNEYGLCIKKK 121
TLQLCV ++CLI+QL Y +P ++ FL+DP FVG+ + KL K + + I K
Sbjct: 77 TLQLCVGSRCLIIQLGYNYGLPKVLRTFLADPKTTFVGVWNGQDQKKLEKCRHRVEIGKL 136
Query: 122 IDVRTLAK 129
+D+R +
Sbjct: 137 LDIRMFVR 144
>ZFIN|ZDB-GENE-070702-2 [details] [associations]
symbol:wrn "Werner syndrome" species:7955 "Danio
rerio" [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS50967 PROSITE:PS51194 SMART:SM00474 SMART:SM00490
SMART:SM00956 ZFIN:ZDB-GENE-070702-2 GO:GO:0005524 GO:GO:0006260
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
GO:GO:0005622 GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 EMBL:BX537303 IPI:IPI00993584
ProteinModelPortal:E9QGF6 Ensembl:ENSDART00000136531 Uniprot:E9QGF6
Length = 1436
Score = 169 (64.5 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 45/151 (29%), Positives = 75/151 (49%)
Query: 43 VGLNCKWKPHPIPSLSGKIATLQLCV-DTKCLILQLLYMDCIPLSIKNFLSDPNVVFVGI 101
VG + +W P + K+A +QLC + KC + + M P +K FL D N++ VG+
Sbjct: 67 VGFDLEWPPSFTKGKTKKVAMVQLCASEDKCYLFHISSMSGFPPGLKMFLEDENIMKVGV 126
Query: 102 EVEEIMSKLKNEYGLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVC 161
+E KL ++Y + +K +D+ LA + + C K L L LL+ + +K K V
Sbjct: 127 GIEGDKWKLLSDYDIKLKNIVDLSDLA--NEKLRCCEKWSLDGLVKHLLKKQLFKDKLVR 184
Query: 162 MNNLESGFLDTELIKFACIDAYVSCAIGTKL 192
++ + L + ++A DAY I KL
Sbjct: 185 CSHWDDFSLTEDQKRYAATDAYAGLLIYQKL 215
>TAIR|locus:2092482 [details] [associations]
symbol:AT3G12410 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 EMBL:AP002047 GO:GO:0008408
EMBL:AC069474 HOGENOM:HOG000152188 ProtClustDB:CLSN2683821
EMBL:AK176143 IPI:IPI00544772 RefSeq:NP_187847.1 UniGene:At.50891
ProteinModelPortal:Q9LHG7 PRIDE:Q9LHG7 EnsemblPlants:AT3G12410.1
GeneID:820420 KEGG:ath:AT3G12410 TAIR:At3g12410 eggNOG:NOG253679
InParanoid:Q9LHG7 OMA:YNTHLEY PhylomeDB:Q9LHG7
Genevestigator:Q9LHG7 Uniprot:Q9LHG7
Length = 230
Score = 135 (52.6 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 46/145 (31%), Positives = 73/145 (50%)
Query: 51 PHPIPSLSGKIAT-LQLCVDTKCLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSK 109
P PI S A LQLCV +CLI+QL Y D +P ++++FL+DP FVG+ + K
Sbjct: 82 PPPIRYYSDNPADILQLCVGNRCLIIQLGYCDQVPNNLRSFLADPETTFVGVWNGQDAGK 141
Query: 110 LKNE-YGLCIKKKIDVRTLAKLHFPISCLGKPGLKV----LAYQLLRLRPWKPKKVCMNN 164
L + L I + +D+R + S ++ + YQ + L P ++ M++
Sbjct: 142 LARCCHQLEIGELLDIRRYVTDSWGRSMRRSSFEEIVEECMGYQGVMLDP----EISMSD 197
Query: 165 LESGFLDTELIKFACIDAYVSCAIG 189
+ LD + I A +DAYV +G
Sbjct: 198 WTAYDLDLDQILQASLDAYVCHQLG 222
Score = 41 (19.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 10/48 (20%), Positives = 18/48 (37%)
Query: 6 SISFCGKIIEXXXXXXXXXAENWLLKI--RSLHSAQILIVGLNCKWKP 51
S+ F G W+ + + S+ L+VG+ +W P
Sbjct: 19 SVDFFGDEFIVTVTWDSSVISRWIRNVLFNNRFSSHPLVVGVGVQWTP 66
>FB|FBgn0037901 [details] [associations]
symbol:CG6744 species:7227 "Drosophila melanogaster"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016444 "somatic cell DNA recombination"
evidence=IMP] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:AE014297 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 eggNOG:NOG68878 OMA:QVIYAAR
GO:GO:0016444 EMBL:AY089433 RefSeq:NP_001247048.1
RefSeq:NP_650075.1 UniGene:Dm.5018 SMR:Q9VGN7 DIP:DIP-23707N
IntAct:Q9VGN7 MINT:MINT-965203 EnsemblMetazoa:FBtr0082402
EnsemblMetazoa:FBtr0308211 GeneID:41374 KEGG:dme:Dmel_CG6744
UCSC:CG6744-RA FlyBase:FBgn0037901 GeneTree:ENSGT00390000014318
InParanoid:Q9VGN7 OrthoDB:EOG4VDNDR GenomeRNAi:41374 NextBio:823540
Uniprot:Q9VGN7
Length = 583
Score = 153 (58.9 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 47/168 (27%), Positives = 81/168 (48%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIATLQLCVDTK-CLILQLLYMDCIPLS 86
W+L H ++G +C+W + +A LQL C + +L +M IP
Sbjct: 65 WVLNELKNHCQTFKVLGFDCEWIT--VGGSRRPVALLQLSSHRGLCALFRLCHMKQIPQD 122
Query: 87 IKNFLSDPNVVFVGIEVEEIMSKLKNEYGLCIKKKIDVRTLAKL--HFPISCLGKPGLKV 144
++ L D +V+ VG+ +E KL ++YG+ + +D+R L + H P LGK
Sbjct: 123 LRELLEDDSVIKVGVAPQEDAMKLSHDYGVGVASTLDLRFLCVMAGHKPEG-LGKLSKTH 181
Query: 145 LAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKL 192
L Y L + W+ + +N E+ L+ + + +A DA ++ AI KL
Sbjct: 182 LNYTLDK--HWR---LACSNWEAKTLEPKQLDYAANDALMAVAIYQKL 224
>UNIPROTKB|O93530 [details] [associations]
symbol:wrn "Werner syndrome ATP-dependent helicase homolog"
species:8355 "Xenopus laevis" [GO:0000287 "magnesium ion binding"
evidence=ISS] [GO:0006259 "DNA metabolic process" evidence=ISS]
[GO:0008408 "3'-5' exonuclease activity" evidence=ISS] [GO:0030145
"manganese ion binding" evidence=ISS] InterPro:IPR001650
InterPro:IPR002121 InterPro:IPR002562 InterPro:IPR004589
InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
Pfam:PF01612 Pfam:PF09382 PROSITE:PS00690 PROSITE:PS50967
PROSITE:PS51194 SMART:SM00341 SMART:SM00474 SMART:SM00490
SMART:SM00956 GO:GO:0005524 GO:GO:0005634 GO:GO:0000287
GO:GO:0003677 GO:GO:0006260 GO:GO:0006259 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0030145 GO:GO:0006310
SUPFAM:SSF53098 GO:GO:0008408 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043140 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 KO:K10900 CTD:7486 HOVERGEN:HBG000325
EMBL:AF067418 PIR:T14895 RefSeq:NP_001081838.1 UniGene:Xl.404
ProteinModelPortal:O93530 SMR:O93530 GeneID:398079 KEGG:xla:398079
Xenbase:XB-GENE-992879 Uniprot:O93530
Length = 1436
Score = 148 (57.2 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 46/153 (30%), Positives = 74/153 (48%)
Query: 42 IVGLNCKWKPHPIPSLSGKIATLQLCV-DTKCLILQLLYMDCIPLSIKNFLSDPNVVFVG 100
++G + +W P +GK+A +Q+CV + KC + + M P +K L D +V VG
Sbjct: 72 VLGFDIEWPPVYTKGKTGKVALIQVCVSEKKCYLFHISPMAGFPKGLKRLLEDESVRKVG 131
Query: 101 IEVEEIMSKLKNEYGLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKV 160
+ +E KL ++Y L +K I++ +A + C K L L + + +K K
Sbjct: 132 VGIEGDQWKLMSDYELKLKGFIELSEMANQK--LRCKEKWTFNGLIKHLFKEQLYKRKSY 189
Query: 161 CMNNLESGFLDTELIK-FACIDAYVSCAIGTKL 192
+N + FL TE K +A DAY I KL
Sbjct: 190 RCSNWDI-FLLTEDQKLYAATDAYAGLLIYKKL 221
>UNIPROTKB|F1NAR0 [details] [associations]
symbol:F1NAR0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] [GO:0000403 "Y-form DNA
binding" evidence=IEA] [GO:0000405 "bubble DNA binding"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0000731 "DNA synthesis involved in DNA repair" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0009267 "cellular response to starvation"
evidence=IEA] [GO:0009378 "four-way junction helicase activity"
evidence=IEA] [GO:0010225 "response to UV-C" evidence=IEA]
[GO:0010259 "multicellular organismal aging" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA] [GO:0031297
"replication fork processing" evidence=IEA] [GO:0032066 "nucleolus
to nucleoplasm transport" evidence=IEA] [GO:0032389 "MutLalpha
complex" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0040009 "regulation of growth rate" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0051345 "positive regulation of hydrolase activity"
evidence=IEA] [GO:0051880 "G-quadruplex DNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002562
InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
InterPro:IPR012337 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
Pfam:PF00570 Pfam:PF01612 Pfam:PF09382 PROSITE:PS51194
SMART:SM00341 SMART:SM00474 SMART:SM00490 SMART:SM00956
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0006979
GO:GO:0005730 GO:GO:0042981 GO:GO:0000287 GO:GO:0006284
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
GO:GO:0006310 GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009
GO:GO:0008408 GO:GO:0051345 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043140 GO:GO:0000723 GO:GO:0010225
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731 GO:GO:0000405
GO:GO:0009378 GO:GO:0051880 GO:GO:0031297 GO:GO:0032389
GO:GO:0032066 OMA:GIEGDQW EMBL:AADN02016143 IPI:IPI01017120
Ensembl:ENSGALT00000016720 Uniprot:F1NAR0
Length = 1367
Score = 144 (55.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 43/151 (28%), Positives = 66/151 (43%)
Query: 43 VGLNCKWKPHPIPSLSGKIATLQLCV-DTKCLILQLLYMDCIPLSIKNFLSDPNVVFVGI 101
VG + +W P KIA +QLCV + KC + + M P +K L D + VG+
Sbjct: 44 VGFDIEWPPSYTKGKMAKIALIQLCVTEEKCYLFHISSMSGFPKGLKRLLEDETIKKVGV 103
Query: 102 EVEEIMSKLKNEYGLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVC 161
+E KL ++ + +K +++ +A + + C L L L + K K +
Sbjct: 104 GIEGDHWKLMGDFEVKLKSFVELADVA--NEKLKCKEVWSLNGLVKHLFGKQLLKDKSIR 161
Query: 162 MNNLESGFLDTELIKFACIDAYVSCAIGTKL 192
N E LD E +A DAY I KL
Sbjct: 162 CGNWEKFPLDEEQKLYAATDAYAGFIIYQKL 192
>ZFIN|ZDB-GENE-030131-6387 [details] [associations]
symbol:exd2 "exonuclease 3'-5' domain containing
2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
ZFIN:ZDB-GENE-030131-6387 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 OMA:QVIYAAR
GeneTree:ENSGT00390000014318 EMBL:CU302376 IPI:IPI00886631
Ensembl:ENSDART00000111389 ArrayExpress:F1QBW6 Bgee:F1QBW6
Uniprot:F1QBW6
Length = 617
Score = 137 (53.3 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 48/164 (29%), Positives = 84/164 (51%)
Query: 42 IVGLNCKWKPHPIPSLSGKIAT---LQLCVDT-KCLILQLL-YMDC-IPLSIKNFLSDPN 95
++GL+C+W S+ G+++ LQL T +C++++LL + + +P S+ L D
Sbjct: 105 VLGLDCEWVKRVRVSVKGRVSAVSLLQLSSFTGRCVLVRLLAFQNAQLPKSLIVLLRDQR 164
Query: 96 VVFVGIEVEEIMSKLKNEYGLCIKKKIDVRTLAKLHFPISCLGKP-GLKVLAYQLLRLRP 154
V+ VG+ E +L ++GL + +D+R LA + L LK LA LL +
Sbjct: 165 VLKVGVGCYEDGKRLAQDHGLTLSCTVDLRYLALRRSKQAVLTNGLSLKSLAEDLLNVTL 224
Query: 155 WKPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLLLEETQ 198
K ++ ++ E+ L E I +A DA +S A+ LL T+
Sbjct: 225 DKSVELRCSDWEAEELSPEQITYAARDAQISIALFFHLLGMNTE 268
>TAIR|locus:2092457 [details] [associations]
symbol:AT3G12460 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 EMBL:AP002047 GO:GO:0008408
EMBL:AC069474 eggNOG:KOG4373 HOGENOM:HOG000152188
ProtClustDB:CLSN2683821 IPI:IPI00526836 RefSeq:NP_187852.1
UniGene:At.50599 ProteinModelPortal:Q9LHG2 DNASU:820425
EnsemblPlants:AT3G12460.1 GeneID:820425 KEGG:ath:AT3G12460
TAIR:At3g12460 InParanoid:Q9LHG2 PhylomeDB:Q9LHG2
Genevestigator:Q9LHG2 Uniprot:Q9LHG2
Length = 242
Score = 124 (48.7 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 37/128 (28%), Positives = 65/128 (50%)
Query: 63 TLQLCVDTKCLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKL-KNEYGLCIKKK 121
TLQLCV +C+I+QL Y + +P ++NFL+D + FVGI + KL ++ + L I +
Sbjct: 103 TLQLCVGNRCIIIQLRYCERVPQVLRNFLADRDNTFVGIWNSQDAGKLERSRHQLEIAEL 162
Query: 122 IDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWK-PKKVCMNNLESGFLDTELIKFACI 180
+D+R + L+ + + L + ++V M++ L + I A I
Sbjct: 163 MDLREFVSDSSGRRSMYNYSLEKIVEENLGYPGVRLDREVSMSDWRVYNLSYDQILQASI 222
Query: 181 DAYVSCAI 188
D Y C++
Sbjct: 223 DVYACCSL 230
Score = 40 (19.1 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 37 SAQILIVGLNCKWKP---HPI-PSLS 58
S+ L+VG+ +W P HP P +S
Sbjct: 51 SSHPLVVGVGVQWTPSGYHPASPPVS 76
>TAIR|locus:2092442 [details] [associations]
symbol:AT3G12440 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISM] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 EMBL:AP002047 GO:GO:0008408
EMBL:AC069474 HOGENOM:HOG000152188 IPI:IPI00533131
RefSeq:NP_187850.1 UniGene:At.65083 ProteinModelPortal:Q9LHG4
SMR:Q9LHG4 EnsemblPlants:AT3G12440.1 GeneID:820423
KEGG:ath:AT3G12440 TAIR:At3g12440 eggNOG:NOG282953
InParanoid:Q9LHG4 PhylomeDB:Q9LHG4 Genevestigator:Q9LHG4
Uniprot:Q9LHG4
Length = 353
Score = 134 (52.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 55/177 (31%), Positives = 88/177 (49%)
Query: 29 LLKIRSLHS-AQILIVGLNCKWKPHPIPSLSGKIA-TLQLCVDTKCLILQLLYMDCIPLS 86
L++ RS+ A+ L V +++ P+ S A TLQLCV +C+I+QL Y + +P
Sbjct: 182 LVRYRSVSPPARYLSVSPPARYRSVSPPARSDPPANTLQLCVGNRCIIIQLFYCNRVPHV 241
Query: 87 IKNFLSDPNVVFVGIEVEEIMSKLK-NEYGLCIKKKIDVRTLAKLHFPISCLGKPGLK-- 143
++ FL D N FVG + KLK + + L I + +D+R H + G+ GLK
Sbjct: 242 LRRFLGDRNHTFVGFWNSQDAGKLKRSRHRLEIAELLDLRN----HV-VDSRGR-GLKGR 295
Query: 144 ---VLAYQLLRLRPWKPKK-VCMNNLESGFLDTELIKFACIDAYVSCAIGTKLLLEE 196
V+ + L R + +K + M++ L + I A ID YV +G + L E
Sbjct: 296 SFEVVVGECLGYRGVRLEKAIGMSDWSVYDLSYDQILQASIDVYVCSKLGFRNRLWE 352
>TAIR|locus:2092507 [details] [associations]
symbol:AT3G12430 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 SMART:SM00474
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 EMBL:AC069474 IPI:IPI00535476
RefSeq:NP_187849.1 UniGene:At.65082 ProteinModelPortal:Q9C7A5
EnsemblPlants:AT3G12430.1 GeneID:820422 KEGG:ath:AT3G12430
TAIR:At3g12430 eggNOG:KOG4373 HOGENOM:HOG000152188
InParanoid:Q9C7A5 OMA:IIIQLSH PhylomeDB:Q9C7A5
ProtClustDB:CLSN2683821 Genevestigator:Q9C7A5 Uniprot:Q9C7A5
Length = 238
Score = 119 (46.9 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 26/64 (40%), Positives = 42/64 (65%)
Query: 63 TLQLCVDTKCLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLK-NEYGLCIKKK 121
TLQLCV +C+I+QL + + +P ++NFL+D + FVGI + KLK +++ L I
Sbjct: 103 TLQLCVGNRCIIIQLSHCERVPQVLRNFLADRDYTFVGIWNSQDAGKLKRSKHELEIAVL 162
Query: 122 IDVR 125
+D+R
Sbjct: 163 LDLR 166
Score = 41 (19.5 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 28 WLLKIRSLH--SAQILIVGLNCKWKPHPIPSLSGKI 61
W+ + S + S+ L+VG+ +W P S S +
Sbjct: 40 WIHDVLSHNRFSSHPLVVGVGVQWTPSSYYSASSPV 75
>UNIPROTKB|Q14191 [details] [associations]
symbol:WRN "Werner syndrome ATP-dependent helicase"
species:9606 "Homo sapiens" [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0040009
"regulation of growth rate" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031297 "replication fork processing" evidence=IMP;IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0000723 "telomere
maintenance" evidence=IMP] [GO:0007569 "cell aging" evidence=IMP]
[GO:0010259 "multicellular organismal aging" evidence=IMP]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0007568 "aging" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003678 "DNA helicase activity" evidence=IDA;IMP]
[GO:0004386 "helicase activity" evidence=IDA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0000731 "DNA synthesis involved
in DNA repair" evidence=IDA] [GO:0010225 "response to UV-C"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0032389 "MutLalpha complex" evidence=IDA] [GO:0000403 "Y-form
DNA binding" evidence=IDA] [GO:0043138 "3'-5' DNA helicase
activity" evidence=IDA] [GO:0000405 "bubble DNA binding"
evidence=IDA] [GO:0009378 "four-way junction helicase activity"
evidence=IDA] [GO:0051880 "G-quadruplex DNA binding" evidence=IDA]
[GO:0006284 "base-excision repair" evidence=IDA] [GO:0051345
"positive regulation of hydrolase activity" evidence=IDA]
[GO:0006979 "response to oxidative stress" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000287 "magnesium ion
binding" evidence=IDA] [GO:0030145 "manganese ion binding"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=IMP] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0071480 "cellular response to gamma
radiation" evidence=IDA] [GO:0004527 "exonuclease activity"
evidence=IDA] [GO:0009267 "cellular response to starvation"
evidence=IDA] [GO:0032066 "nucleolus to nucleoplasm transport"
evidence=IDA] [GO:0042981 "regulation of apoptotic process"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
evidence=IMP;IDA] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341
SMART:SM00474 SMART:SM00490 SMART:SM00956 GO:GO:0005524
GO:GO:0005813 Pathway_Interaction_DB:telomerasepathway
GO:GO:0042803 GO:GO:0005654 GO:GO:0006979 GO:GO:0005730
GO:GO:0042981 GO:GO:0032403 GO:GO:0000287 GO:GO:0006284
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
GO:GO:0006310 GO:GO:0009267 GO:GO:0004003 SUPFAM:SSF53098
MIM:114500 GO:GO:0040009 GO:GO:0008408 GO:GO:0051345 GO:GO:0010259
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GO:GO:0000723 GO:GO:0010225 GO:GO:0007569 eggNOG:COG0514
Gene3D:1.10.150.80 SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0000403
GO:GO:0000731 GO:GO:0000405 GO:GO:0009378 GO:GO:0051880
GO:GO:0031297 GO:GO:0043138 GO:GO:0032066 KO:K10900 EMBL:L76937
EMBL:AY818673 EMBL:AF091214 EMBL:AF181897 EMBL:AF181896
EMBL:AY442327 EMBL:AC084736 IPI:IPI00029107 RefSeq:NP_000544.2
UniGene:Hs.632050 PDB:2AXL PDB:2DGZ PDB:2E1E PDB:2E1F PDB:2FBT
PDB:2FBV PDB:2FBX PDB:2FBY PDB:2FC0 PDB:3AAF PDBsum:2AXL
PDBsum:2DGZ PDBsum:2E1E PDBsum:2E1F PDBsum:2FBT PDBsum:2FBV
PDBsum:2FBX PDBsum:2FBY PDBsum:2FC0 PDBsum:3AAF DisProt:DP00443
ProteinModelPortal:Q14191 SMR:Q14191 DIP:DIP-31380N IntAct:Q14191
MINT:MINT-95856 STRING:Q14191 PhosphoSite:Q14191 DMDM:6136393
PaxDb:Q14191 PRIDE:Q14191 Ensembl:ENST00000298139 GeneID:7486
KEGG:hsa:7486 UCSC:uc003xio.4 CTD:7486 GeneCards:GC08P030948
H-InvDB:HIX0007441 HGNC:HGNC:12791 HPA:HPA028661 MIM:277700
MIM:604611 neXtProt:NX_Q14191 Orphanet:902 PharmGKB:PA367
HOGENOM:HOG000146447 HOVERGEN:HBG000325 InParanoid:Q14191
OMA:GIEGDQW OrthoDB:EOG4DNF3J PhylomeDB:Q14191
EvolutionaryTrace:Q14191 GenomeRNAi:7486 NextBio:29326 Bgee:Q14191
CleanEx:HS_WRN Genevestigator:Q14191 GermOnline:ENSG00000165392
Uniprot:Q14191
Length = 1432
Score = 135 (52.6 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 42 IVGLNCKWKPHPIPSLSGKIATLQLCV-DTKCLILQLLYMDCIPLSIKNFLSDPNVVFVG 100
+VG + +W P GK+A +QLCV ++KC + + M P +K L + V G
Sbjct: 78 VVGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHVSSMSVFPQGLKMLLENKAVKKAG 137
Query: 101 IEVEEIMSKLKNEYGLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKV 160
+ +E KL ++ + +K +++ +A + C L L LL + K K +
Sbjct: 138 VGIEGDQWKLLRDFDIKLKNFVELTDVANKK--LKCTETWSLNSLVKHLLGKQLLKDKSI 195
Query: 161 CMNNLESGFLDTELIK-FACIDAYVSCAIGTKL-LLEET 197
+N S F TE K +A DAY I L +L++T
Sbjct: 196 RCSNW-SKFPLTEDQKLYAATDAYAGFIIYRNLEILDDT 233
>UNIPROTKB|F1RX70 [details] [associations]
symbol:WRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00474
SMART:SM00490 SMART:SM00956 GO:GO:0005524 GO:GO:0006260
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
GO:GO:0005622 GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 EMBL:FP102088 EMBL:FP565873
Ensembl:ENSSSCT00000017248 Uniprot:F1RX70
Length = 1409
Score = 134 (52.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 42/153 (27%), Positives = 71/153 (46%)
Query: 42 IVGLNCKWKPHPIPSLSGKIATLQLCV-DTKCLILQLLYMDCIPLSIKNFLSDPNVVFVG 100
+VG + +W P G+IA +QLCV ++KC + + M P +K L + + G
Sbjct: 78 VVGFDMEWPPVYNKGKLGRIALIQLCVSESKCYLFHISSMSVFPQGLKMLLENEAIKKAG 137
Query: 101 IEVEEIMSKLKNEYGLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKV 160
+ ++ SKL ++ + +K +++ +A + + C L L L + K K +
Sbjct: 138 VGIKGDQSKLLRDFDIKLKSFVELTDVA--NEKLKCAETWSLNGLVKHLFSKQLLKDKSI 195
Query: 161 CMNNLESGFLDTELIK-FACIDAYVSCAIGTKL 192
+N S F TE K +A DAY I KL
Sbjct: 196 RCSNW-SNFPLTEDQKLYAATDAYAGFIIYQKL 227
>UNIPROTKB|I3LC91 [details] [associations]
symbol:WRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051880 "G-quadruplex DNA binding" evidence=IEA]
[GO:0051345 "positive regulation of hydrolase activity"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0040009 "regulation of growth rate" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0032389
"MutLalpha complex" evidence=IEA] [GO:0032066 "nucleolus to
nucleoplasm transport" evidence=IEA] [GO:0031297 "replication fork
processing" evidence=IEA] [GO:0030145 "manganese ion binding"
evidence=IEA] [GO:0010259 "multicellular organismal aging"
evidence=IEA] [GO:0010225 "response to UV-C" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0009267 "cellular response to starvation" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA repair"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0000405 "bubble DNA binding" evidence=IEA] [GO:0000403 "Y-form
DNA binding" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] InterPro:IPR001650
InterPro:IPR002121 InterPro:IPR002562 InterPro:IPR004589
InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967 PROSITE:PS51194
SMART:SM00341 SMART:SM00474 SMART:SM00490 SMART:SM00956
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0006979
GO:GO:0005730 GO:GO:0042981 GO:GO:0000287 GO:GO:0006284
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
GO:GO:0006310 GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009
GO:GO:0008408 GO:GO:0051345 GO:GO:0010259 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 GO:GO:0000723
GO:GO:0010225 GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80
SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731
GO:GO:0000405 GO:GO:0009378 GO:GO:0051880 GO:GO:0031297
GO:GO:0032389 GO:GO:0032066 OMA:GIEGDQW EMBL:FP102088 EMBL:FP565873
Ensembl:ENSSSCT00000022344 Uniprot:I3LC91
Length = 1507
Score = 134 (52.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 42/153 (27%), Positives = 71/153 (46%)
Query: 42 IVGLNCKWKPHPIPSLSGKIATLQLCV-DTKCLILQLLYMDCIPLSIKNFLSDPNVVFVG 100
+VG + +W P G+IA +QLCV ++KC + + M P +K L + + G
Sbjct: 78 VVGFDMEWPPVYNKGKLGRIALIQLCVSESKCYLFHISSMSVFPQGLKMLLENEAIKKAG 137
Query: 101 IEVEEIMSKLKNEYGLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKV 160
+ ++ SKL ++ + +K +++ +A + + C L L L + K K +
Sbjct: 138 VGIKGDQSKLLRDFDIKLKSFVELTDVA--NEKLKCAETWSLNGLVKHLFSKQLLKDKSI 195
Query: 161 CMNNLESGFLDTELIK-FACIDAYVSCAIGTKL 192
+N S F TE K +A DAY I KL
Sbjct: 196 RCSNW-SNFPLTEDQKLYAATDAYAGFIIYQKL 227
>MGI|MGI:109635 [details] [associations]
symbol:Wrn "Werner syndrome homolog (human)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000287 "magnesium ion binding" evidence=ISO] [GO:0000403
"Y-form DNA binding" evidence=ISO] [GO:0000405 "bubble DNA binding"
evidence=ISO] [GO:0000723 "telomere maintenance"
evidence=ISO;IGI;IMP] [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=ISO] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003678 "DNA helicase
activity" evidence=ISO] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=ISO]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006259 "DNA metabolic process" evidence=ISO;IMP] [GO:0006260
"DNA replication" evidence=ISO;IMP] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0006979 "response to oxidative
stress" evidence=ISO] [GO:0007569 "cell aging" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=ISO;IDA] [GO:0009267 "cellular
response to starvation" evidence=ISO] [GO:0009378 "four-way
junction helicase activity" evidence=ISO] [GO:0010225 "response to
UV-C" evidence=ISO] [GO:0010259 "multicellular organismal aging"
evidence=ISO;IGI] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030145 "manganese
ion binding" evidence=ISO] [GO:0031297 "replication fork
processing" evidence=ISO] [GO:0032066 "nucleolus to nucleoplasm
transport" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0040009 "regulation of growth rate" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0042981
"regulation of apoptotic process" evidence=ISO] [GO:0043138 "3'-5'
DNA helicase activity" evidence=ISO] [GO:0043140 "ATP-dependent
3'-5' DNA helicase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051345 "positive regulation of hydrolase
activity" evidence=ISO] [GO:0051880 "G-quadruplex DNA binding"
evidence=ISO] [GO:0071480 "cellular response to gamma radiation"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341
SMART:SM00474 SMART:SM00490 SMART:SM00956 MGI:MGI:109635
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 GO:GO:0000287
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145 GO:GO:0006310
GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009 GO:GO:0008408
GO:GO:0010259 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 GO:GO:0000723 eggNOG:COG0514
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 GO:GO:0032066 KO:K10900 CTD:7486
HOGENOM:HOG000146447 HOVERGEN:HBG000325 OMA:GIEGDQW
OrthoDB:EOG4DNF3J EMBL:D86527 EMBL:D86526 EMBL:AF091215
EMBL:AF091216 EMBL:AF241636 EMBL:AC153789 EMBL:AC115809
EMBL:BC050921 EMBL:BC060700 IPI:IPI00113830 PIR:T17452 PIR:T30247
RefSeq:NP_001116294.1 RefSeq:NP_035851.3 UniGene:Mm.228805 PDB:2E6L
PDB:2E6M PDBsum:2E6L PDBsum:2E6M ProteinModelPortal:O09053
SMR:O09053 DIP:DIP-27642N STRING:O09053 PhosphoSite:O09053
PaxDb:O09053 PRIDE:O09053 Ensembl:ENSMUST00000033990
Ensembl:ENSMUST00000033991 GeneID:22427 KEGG:mmu:22427
InParanoid:Q80YP9 EvolutionaryTrace:O09053 NextBio:302865
Bgee:O09053 CleanEx:MM_WRN Genevestigator:O09053
GermOnline:ENSMUSG00000031583 Uniprot:O09053
Length = 1401
Score = 133 (51.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 40/153 (26%), Positives = 72/153 (47%)
Query: 42 IVGLNCKWKPHPIPSLSGKIATLQLCV-DTKCLILQLLYMDCIPLSIKNFLSDPNVVFVG 100
+VG + +W P P ++A +QLCV ++KC + + M P +K L + ++ G
Sbjct: 72 VVGFDMEWPPIYKPGKRSRVAVIQLCVSESKCYLFHISSMSVFPQGLKMLLENKSIKKAG 131
Query: 101 IEVEEIMSKLKNEYGLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKV 160
+ +E KL ++ + ++ +++ +A + + C L L +L + K K +
Sbjct: 132 VGIEGDQWKLLRDFDVKLESFVELTDVA--NEKLKCAETWSLNGLVKHVLGKQLLKDKSI 189
Query: 161 CMNNLESGFLDTELIK-FACIDAYVSCAIGTKL 192
+N S F TE K +A DAY I KL
Sbjct: 190 RCSNW-SNFPLTEDQKLYAATDAYAGLIIYQKL 221
>UNIPROTKB|Q9NVH0 [details] [associations]
symbol:EXD2 "Exonuclease 3'-5' domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 EMBL:CH471061
GO:GO:0003676 GO:GO:0005622 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0008408 EMBL:AK001600 EMBL:AK295601 EMBL:AL834434
EMBL:BX647767 EMBL:AL359317 EMBL:BC001962 IPI:IPI00465113
IPI:IPI00915852 RefSeq:NP_001180289.1 RefSeq:NP_001180290.1
RefSeq:NP_001180291.1 RefSeq:NP_001180292.1 RefSeq:NP_060669.1
UniGene:Hs.533878 ProteinModelPortal:Q9NVH0 STRING:Q9NVH0
PhosphoSite:Q9NVH0 DMDM:37999798 PaxDb:Q9NVH0 PRIDE:Q9NVH0
DNASU:55218 Ensembl:ENST00000312994 Ensembl:ENST00000409014
Ensembl:ENST00000409018 Ensembl:ENST00000409242
Ensembl:ENST00000409675 Ensembl:ENST00000409949
Ensembl:ENST00000449989 GeneID:55218 KEGG:hsa:55218 UCSC:uc001xkt.3
CTD:55218 GeneCards:GC14P069658 HGNC:HGNC:20217 HPA:HPA002906
HPA:HPA005848 neXtProt:NX_Q9NVH0 PharmGKB:PA164719421
eggNOG:NOG68878 HOGENOM:HOG000046597 InParanoid:Q9NVH0 OMA:QVIYAAR
OrthoDB:EOG4GTKD1 ChiTaRS:EXD2 GenomeRNAi:55218 NextBio:59188
ArrayExpress:Q9NVH0 Bgee:Q9NVH0 CleanEx:HS_EXDL2
Genevestigator:Q9NVH0 GermOnline:ENSG00000081177 Uniprot:Q9NVH0
Length = 621
Score = 129 (50.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 41/158 (25%), Positives = 82/158 (51%)
Query: 42 IVGLNCKWKPHPIPSLSGKIATLQLCVDTK-CLILQLLYMDC----IPLSIKNFLSDPNV 96
++G++C+W + + ++ LQ+ + C++++L + C +P ++ + L+D +
Sbjct: 104 VLGIDCEWVN--LEGKASPLSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTI 161
Query: 97 VFVGIEVEEIMSKLKNEYGLCIKKKIDVRTLA-KLHFPISCLGKPGLKVLAYQLLRLRPW 155
+ VG+ E SKL +YGL ++ +D+R LA + + C G LK LA +L
Sbjct: 162 LKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGL-SLKSLAETVLNFPLD 220
Query: 156 KPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLL 193
K + +N ++ L + + +A DA +S A+ LL
Sbjct: 221 KSLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHLL 258
>UNIPROTKB|J9NWB3 [details] [associations]
symbol:EXD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
GeneTree:ENSGT00390000014318 EMBL:AAEX03005807
Ensembl:ENSCAFT00000048173 Uniprot:J9NWB3
Length = 577
Score = 128 (50.1 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 42/158 (26%), Positives = 81/158 (51%)
Query: 42 IVGLNCKWKPHPIPSLSGKIATLQLCVDTK-CLILQLLYMDC----IPLSIKNFLSDPNV 96
++G++C+W + ++ LQ+ + C++++L + C +P ++ + L+D +
Sbjct: 109 VLGIDCEWVNSE--GRASPLSLLQMASPSGFCVLVRLPKLICGGKTLPKTLLDILADGTI 166
Query: 97 VFVGIEVEEIMSKLKNEYGLCIKKKIDVRTLA-KLHFPISCLGKPGLKVLAYQLLRLRPW 155
+ VG+ E SKL +YGL +K +D+R LA + + C G LK LA +L
Sbjct: 167 LKVGVGCSEDASKLLQDYGLVVKGCLDLRYLAVRQRNNLLCNGL-SLKSLAETVLNFPLD 225
Query: 156 KPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLL 193
K + +N ++ L + + +A DA +S A+ LL
Sbjct: 226 KSLLLRCSNWDAENLTEDQVIYAARDAQISVALFLHLL 263
>UNIPROTKB|E2QXX4 [details] [associations]
symbol:EXD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408 CTD:55218 OMA:QVIYAAR
GeneTree:ENSGT00390000014318 EMBL:AAEX03005807 RefSeq:XP_547872.2
Ensembl:ENSCAFT00000026226 GeneID:490750 KEGG:cfa:490750
Uniprot:E2QXX4
Length = 623
Score = 128 (50.1 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 42/158 (26%), Positives = 81/158 (51%)
Query: 42 IVGLNCKWKPHPIPSLSGKIATLQLCVDTK-CLILQLLYMDC----IPLSIKNFLSDPNV 96
++G++C+W + ++ LQ+ + C++++L + C +P ++ + L+D +
Sbjct: 106 VLGIDCEWVNSE--GRASPLSLLQMASPSGFCVLVRLPKLICGGKTLPKTLLDILADGTI 163
Query: 97 VFVGIEVEEIMSKLKNEYGLCIKKKIDVRTLA-KLHFPISCLGKPGLKVLAYQLLRLRPW 155
+ VG+ E SKL +YGL +K +D+R LA + + C G LK LA +L
Sbjct: 164 LKVGVGCSEDASKLLQDYGLVVKGCLDLRYLAVRQRNNLLCNGL-SLKSLAETVLNFPLD 222
Query: 156 KPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLL 193
K + +N ++ L + + +A DA +S A+ LL
Sbjct: 223 KSLLLRCSNWDAENLTEDQVIYAARDAQISVALFLHLL 260
>DICTYBASE|DDB_G0278593 [details] [associations]
symbol:exdl2B "3'-5' exonuclease domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
dictyBase:DDB_G0278593 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
eggNOG:NOG68878 ProtClustDB:CLSZ2430753 RefSeq:XP_642107.2
ProteinModelPortal:Q54YU5 EnsemblProtists:DDB0238341 GeneID:8621318
KEGG:ddi:DDB_G0278593 OMA:ASKENIC Uniprot:Q54YU5
Length = 686
Score = 127 (49.8 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 33/125 (26%), Positives = 66/125 (52%)
Query: 60 KIATLQLCVDTKCLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEYGLCIK 119
K+A +QL + ++Q+ M+ IP+S++ L+DP ++ VG+ V + + + + + K
Sbjct: 193 KVALIQLSSKNETFLIQVSQMEKIPISLEQILTDPRLIKVGVAVSQDAATIFQTFSVVTK 252
Query: 120 KKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFAC 179
+D+ +A+L + G GL LA ++ + K K+ + E+ L + I +A
Sbjct: 253 GYVDLVPIARL---TNYEGN-GLASLALNVMNVTLNKSNKIRCGHWENKKLSNDQIHYAA 308
Query: 180 IDAYV 184
DA+V
Sbjct: 309 ADAWV 313
>UNIPROTKB|F1S4B8 [details] [associations]
symbol:EXD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 CTD:55218 OMA:QVIYAAR
GeneTree:ENSGT00390000014318 EMBL:CU468204 EMBL:CU633187
RefSeq:XP_001925126.4 Ensembl:ENSSSCT00000002567 GeneID:100155300
KEGG:ssc:100155300 Uniprot:F1S4B8
Length = 624
Score = 126 (49.4 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 40/157 (25%), Positives = 79/157 (50%)
Query: 42 IVGLNCKWKPHPIPSLSGKIATLQLCVDTK-CLILQLLYM----DCIPLSIKNFLSDPNV 96
++G++C+W + + ++ LQ+ + C++++L + +P ++ + L+D +
Sbjct: 107 VLGIDCEWVN--LEGKASPLSLLQMASPSGFCVLVRLPKLISGGKTLPKTLLDILADGTI 164
Query: 97 VFVGIEVEEIMSKLKNEYGLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWK 156
+ VG+ E SKL +YGL +K +D+R LA H LK LA +L K
Sbjct: 165 LKVGVGCSEDASKLLQDYGLVVKGCLDLRYLAMRHRNNLLSNGLSLKSLAETVLNFPLDK 224
Query: 157 PKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLL 193
+ +N ++ L + + +A DA +S A+ +LL
Sbjct: 225 SLLLRCSNWDAENLTEDQVIYAARDAQISVALFLRLL 261
>RGD|1311087 [details] [associations]
symbol:Exd2 "exonuclease 3'-5' domain containing 2"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
RGD:1311087 GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098
GO:GO:0008408 EMBL:CH473982 CTD:55218 eggNOG:NOG68878
HOGENOM:HOG000046597 OMA:QVIYAAR OrthoDB:EOG4GTKD1
GeneTree:ENSGT00390000014318 EMBL:BC166432 IPI:IPI00365636
RefSeq:NP_001102185.1 UniGene:Rn.102 STRING:B2GUW4
Ensembl:ENSRNOT00000033378 GeneID:362759 KEGG:rno:362759
UCSC:RGD:1311087 HOVERGEN:HBG051023 NextBio:681137
Genevestigator:B2GUW4 Uniprot:B2GUW4
Length = 648
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/158 (26%), Positives = 81/158 (51%)
Query: 42 IVGLNCKWKPHPIPSLSGKIATLQLCVDTK-CLILQL---LYMD-CIPLSIKNFLSDPNV 96
++G++C+W + + ++ LQ+ + C +++L +Y +P ++ + L+D +
Sbjct: 131 VLGIDCEWVN--LEGKASPLSLLQMASPSGFCALVRLPRLIYGGKTLPRTLLDILADGTI 188
Query: 97 VFVGIEVEEIMSKLKNEYGLCIKKKIDVRTLA-KLHFPISCLGKPGLKVLAYQLLRLRPW 155
+ VG+ E +KL +YGL ++ +D+R LA K + C G LK LA LL
Sbjct: 189 LKVGVGCSEDANKLLQDYGLIVRGCLDLRYLAMKQGNSVLCNGL-SLKSLAETLLNFPLD 247
Query: 156 KPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLL 193
K + +N ++ L + + +A DA +S A+ LL
Sbjct: 248 KSLLLRCSNWDAENLTEDQVTYAARDAQISVALFLHLL 285
>TAIR|locus:2095994 [details] [associations]
symbol:AT3G62320 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003676 SUPFAM:SSF53098
EMBL:AL162507 eggNOG:KOG4373 ProtClustDB:CLSN2684128
IPI:IPI00528255 PIR:T48024 RefSeq:NP_191791.1 UniGene:At.50306
ProteinModelPortal:Q9LZQ8 DNASU:825405 EnsemblPlants:AT3G62320.1
GeneID:825405 KEGG:ath:AT3G62320 TAIR:At3g62320
HOGENOM:HOG000153039 OMA:CNKENAN PhylomeDB:Q9LZQ8
Genevestigator:Q9LZQ8 Uniprot:Q9LZQ8
Length = 171
Score = 113 (44.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 60 KIATLQLCVDTKCLILQLLYM--DCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEYGLC 117
K+ L+L CLI+ L Y+ + +P+S+ NFL+ P+ F G+ + + + LK+E GL
Sbjct: 63 KLVILELSDGQNCLIIPLPYVQGNKLPVSLTNFLNLPDFTFTGVGINKALKMLKSECGLT 122
Query: 118 IKKKIDV 124
K +D+
Sbjct: 123 CKNAVDI 129
>TAIR|locus:2156243 [details] [associations]
symbol:AT5G48350 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
EMBL:CP002688 GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098
GO:GO:0008408 EMBL:AP000372 EMBL:AY735711 IPI:IPI00543542
RefSeq:NP_199646.1 UniGene:At.55429 ProteinModelPortal:Q9LK79
EnsemblPlants:AT5G48350.1 GeneID:834888 KEGG:ath:AT5G48350
TAIR:At5g48350 OMA:EIGPATW PhylomeDB:Q9LK79 ProtClustDB:CLSN2684128
Genevestigator:Q9LK79 Uniprot:Q9LK79
Length = 199
Score = 116 (45.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/143 (27%), Positives = 66/143 (46%)
Query: 60 KIATLQLCVDTKCLILQLLYMD---------CIPLSIKNFLSDPNVVFVGIEVEEIMSKL 110
K LQLC CLI+QL D +PL + NFL+ P FVGI + + M +L
Sbjct: 57 KTVLLQLCDGDNCLIVQLPDEDEDEGEGEDDNLPLPLFNFLNLPEFTFVGIGINKTMMRL 116
Query: 111 KNEYGLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFL 170
++E+GL K +++ + ++ + +K ++ +P + + E L
Sbjct: 117 ESEFGLTCKNVVEIGPAT---WNLTNM-TTDVKFRISAIVSTE--RPSNAVLEDWEKFVL 170
Query: 171 DTELIKFACIDAYVSCAIGTKLL 193
+ IK A +AY + IG LL
Sbjct: 171 NKNQIKLAASNAYFAFGIGNILL 193
>RGD|1564788 [details] [associations]
symbol:Wrn "Werner syndrome, RecQ helicase-like" species:10116
"Rattus norvegicus" [GO:0000287 "magnesium ion binding"
evidence=ISO] [GO:0000403 "Y-form DNA binding" evidence=ISO]
[GO:0000405 "bubble DNA binding" evidence=ISO] [GO:0000723
"telomere maintenance" evidence=ISO] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=ISO] [GO:0001302 "replicative cell
aging" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=ISO] [GO:0004527 "exonuclease activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006259 "DNA metabolic
process" evidence=ISO] [GO:0006260 "DNA replication"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=ISO] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0006979 "response to oxidative stress"
evidence=ISO] [GO:0007569 "cell aging" evidence=ISO] [GO:0008408
"3'-5' exonuclease activity" evidence=IEA;ISO] [GO:0009267
"cellular response to starvation" evidence=ISO] [GO:0009378
"four-way junction helicase activity" evidence=ISO] [GO:0010225
"response to UV-C" evidence=ISO] [GO:0010259 "multicellular
organismal aging" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0030145 "manganese ion binding" evidence=ISO]
[GO:0031297 "replication fork processing" evidence=ISO] [GO:0032066
"nucleolus to nucleoplasm transport" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0040009 "regulation of growth rate"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043138 "3'-5' DNA helicase activity"
evidence=ISO] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IEA] [GO:0051345 "positive regulation of
hydrolase activity" evidence=ISO] [GO:0051880 "G-quadruplex DNA
binding" evidence=ISO] [GO:0071480 "cellular response to gamma
radiation" evidence=ISO] [GO:0032389 "MutLalpha complex"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00474
SMART:SM00490 SMART:SM00956 RGD:1564788 GO:GO:0005524 GO:GO:0005813
GO:GO:0005654 GO:GO:0006979 GO:GO:0005730 GO:GO:0042981
GO:GO:0000287 GO:GO:0006284 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0001302 GO:GO:0030145 GO:GO:0006310 GO:GO:0009267
SUPFAM:SSF53098 GO:GO:0040009 GO:GO:0008408 GO:GO:0051345
GO:GO:0010259 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 GO:GO:0000723 GO:GO:0010225
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731 GO:GO:0000405
GO:GO:0009378 GO:GO:0051880 GO:GO:0031297 GO:GO:0032389
GO:GO:0032066 IPI:IPI00960063 ProteinModelPortal:F1LTH9
Ensembl:ENSRNOT00000058805 Uniprot:F1LTH9
Length = 1448
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 37/160 (23%), Positives = 71/160 (44%)
Query: 34 SLHSAQILIVGLNCKWKPHPIPSLSGKIATLQLCV-DTKCLILQLLYMDCIPLSIKNFLS 92
S+H + +VG + +W P ++A +QLCV ++KC + + M P +K L
Sbjct: 71 SMHLSDGDVVGFDMEWPPIYKQGKRSRVAVIQLCVSESKCYLFHISSMSVFPQGLKMLLE 130
Query: 93 DPNVVFVGIEVEEIMSKLKNEYGLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRL 152
+ ++ G+ +E KL ++ + ++ +++ +A + C L L +L
Sbjct: 131 NKSIRKAGVGIEGDQWKLLRDFDVKLESFVELTDVANRK--LKCAETWSLNGLVKHVLGK 188
Query: 153 RPWKPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKL 192
+ K K + +N L + +A DAY I KL
Sbjct: 189 QLLKDKSIRCSNWSDFPLSEDQKLYAATDAYAGLIIYQKL 228
>UNIPROTKB|E1BEE6 [details] [associations]
symbol:WRN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051880 "G-quadruplex DNA binding" evidence=IEA]
[GO:0051345 "positive regulation of hydrolase activity"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0040009 "regulation of growth rate" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0032389
"MutLalpha complex" evidence=IEA] [GO:0032066 "nucleolus to
nucleoplasm transport" evidence=IEA] [GO:0031297 "replication fork
processing" evidence=IEA] [GO:0030145 "manganese ion binding"
evidence=IEA] [GO:0010259 "multicellular organismal aging"
evidence=IEA] [GO:0010225 "response to UV-C" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0009267 "cellular response to starvation" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA repair"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0000405 "bubble DNA binding" evidence=IEA] [GO:0000403 "Y-form
DNA binding" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] InterPro:IPR001650
InterPro:IPR002121 InterPro:IPR002562 InterPro:IPR004589
InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967 PROSITE:PS51194
SMART:SM00341 SMART:SM00474 SMART:SM00490 SMART:SM00956
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0006979
GO:GO:0005730 GO:GO:0042981 GO:GO:0000287 GO:GO:0006284
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
GO:GO:0006310 GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009
GO:GO:0008408 GO:GO:0051345 GO:GO:0010259 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 GO:GO:0000723
GO:GO:0010225 GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80
SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731
GO:GO:0000405 GO:GO:0009378 GO:GO:0051880 GO:GO:0031297
GO:GO:0032389 GO:GO:0032066 OMA:GIEGDQW EMBL:DAAA02060458
EMBL:DAAA02060459 EMBL:DAAA02060460 EMBL:DAAA02060461
EMBL:DAAA02060462 EMBL:DAAA02060463 EMBL:DAAA02060464
EMBL:DAAA02060465 EMBL:DAAA02060466 EMBL:DAAA02060467
EMBL:DAAA02060468 EMBL:DAAA02060469 EMBL:DAAA02060470
EMBL:DAAA02060471 EMBL:DAAA02060472 EMBL:DAAA02060473
EMBL:DAAA02060474 EMBL:DAAA02060475 EMBL:DAAA02060476
EMBL:DAAA02060477 EMBL:DAAA02060478 EMBL:DAAA02060479
EMBL:DAAA02060480 EMBL:DAAA02060481 EMBL:DAAA02060482
EMBL:DAAA02060483 EMBL:DAAA02060484 EMBL:DAAA02060485
EMBL:DAAA02060486 EMBL:DAAA02060487 EMBL:DAAA02060488
EMBL:DAAA02060489 EMBL:DAAA02060490 EMBL:DAAA02060491
EMBL:DAAA02060492 EMBL:DAAA02060493 EMBL:DAAA02060494
IPI:IPI00920936 Ensembl:ENSBTAT00000028778 Uniprot:E1BEE6
Length = 1404
Score = 124 (48.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 40/153 (26%), Positives = 74/153 (48%)
Query: 42 IVGLNCKWKPHPIPSLSGKIATLQLCV-DTKCLILQLLYMDCIPLSIKNFLSDPNVVFVG 100
+VG + +W P +LS ++A +QLCV ++KC + + M P +K L + + G
Sbjct: 76 VVGFDIEWPPFKKGTLS-RVALIQLCVAESKCYLFHISSMSGFPQGLKMLLENEAIKKAG 134
Query: 101 IEVEEIMSKLKNEYGLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKV 160
+ +E+ KL ++ + +K +++ +A + + C+ L L L + K + +
Sbjct: 135 VGIEQDQWKLLRDFDINLKSIVELTDVA--NEKLKCIETWSLNGLVKYLFGKQLLKDRSI 192
Query: 161 CMNNLESGFLDTELIK-FACIDAYVSCAIGTKL 192
++ S F TE K +A DAY I KL
Sbjct: 193 RCSDW-SRFPLTEDQKVYAATDAYAGFIIYQKL 224
>UNIPROTKB|B3LWP6 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7217 "Drosophila ananassae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 EMBL:CH902617
GO:GO:0045950 eggNOG:NOG266861 RefSeq:XP_001954123.1
ProteinModelPortal:B3LWP6 STRING:B3LWP6 PRIDE:B3LWP6 GeneID:6500896
KEGG:dan:Dana_GF18118 FlyBase:FBgn0095136 InParanoid:B3LWP6
OrthoDB:EOG473N7C Uniprot:B3LWP6
Length = 355
Score = 116 (45.9 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 39/155 (25%), Positives = 71/155 (45%)
Query: 40 ILIVGLNCKWKPHPIPSLSGKIATLQLCVDTKCL-ILQLLYMDCIPLSIKNFLSDPNVVF 98
++ + + +W P + GK + +Q+CVD KC I QL + +P ++ ++ P V
Sbjct: 158 VVPMAFDMEW-PFSFQTGPGKSSVIQICVDEKCCYIYQLTNLKKLPSALVALINHPKVRL 216
Query: 99 VGIEVEEIMSKLKNEY-----GLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLR 153
G+ ++ KL+ ++ I+K +D+ + G+ L+ LA + R
Sbjct: 217 HGVNIKADFRKLQRDFPEVSADALIEKCVDLGVWCNVICQTG--GRWSLERLANFICRKA 274
Query: 154 PWKPKKVCMNNLESGFLDTELIKFACIDAYVSCAI 188
K KKV M+ LD + +A ID Y+ I
Sbjct: 275 MDKSKKVRMSKWHVIPLDENQLMYAAIDVYIGQVI 309
>UNIPROTKB|E1BEQ0 [details] [associations]
symbol:EXD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 CTD:55218 OMA:QVIYAAR
GeneTree:ENSGT00390000014318 EMBL:DAAA02029492 IPI:IPI00714556
RefSeq:XP_002691029.1 RefSeq:XP_587937.2 ProteinModelPortal:E1BEQ0
Ensembl:ENSBTAT00000013255 GeneID:539532 KEGG:bta:539532
NextBio:20878052 Uniprot:E1BEQ0
Length = 628
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 39/157 (24%), Positives = 77/157 (49%)
Query: 42 IVGLNCKWKPHPIPSLSGKIATLQLCVDTK-CLILQLLYMDC----IPLSIKNFLSDPNV 96
++G++C+W + ++ LQ+ + C++++L + C +P ++ + L+D +
Sbjct: 111 VLGIDCEWVNSE--GKASPLSLLQMASPSGFCVLVRLPKLICGGKTLPKTLLDILADGTI 168
Query: 97 VFVGIEVEEIMSKLKNEYGLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWK 156
+ VG+ E SKL +YGL +K +D+R LA LK L+ +L K
Sbjct: 169 LKVGVGCSEDASKLLQDYGLVVKGCLDLRYLAMRQRNNLLSNGLSLKSLSETVLNFPLDK 228
Query: 157 PKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLL 193
+ +N ++ L + + +A DA +S A+ LL
Sbjct: 229 SLLLRCSNWDAENLTEDQVIYAARDAQISVALFLHLL 265
>DICTYBASE|DDB_G0278079 [details] [associations]
symbol:exdl2A "3'-5' exonuclease domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0004527
"exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
dictyBase:DDB_G0278079 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
eggNOG:NOG68878 RefSeq:XP_642108.1 ProteinModelPortal:Q54YU4
EnsemblProtists:DDB0238340 GeneID:8621319 KEGG:ddi:DDB_G0278079
OMA:RCSHWEN ProtClustDB:CLSZ2430753 Uniprot:Q54YU4
Length = 718
Score = 116 (45.9 bits), Expect = 0.00020, P = 0.00020
Identities = 32/125 (25%), Positives = 65/125 (52%)
Query: 60 KIATLQLCVDTKCLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEYGLCIK 119
K+A +QL + ++Q+ M+ IP S++ L+DP ++ VG+ V + + + + + K
Sbjct: 223 KVALIQLSSKNETFLIQVSQMEKIPTSLEQILTDPRLIKVGVAVSQDAATIFQTFSVVTK 282
Query: 120 KKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFAC 179
+D+ +A+L + G GL LA ++ + K + ++ E+ L + I +A
Sbjct: 283 GCVDLVPIARL---TNYEGN-GLASLALNVMNVTLDKSNLIRCSHWENKDLTNDQIHYAA 338
Query: 180 IDAYV 184
DA+V
Sbjct: 339 ADAWV 343
>UNIPROTKB|B4JF25 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7222 "Drosophila grimshawi" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 EMBL:CH916369
GO:GO:0045950 eggNOG:NOG266861 OrthoDB:EOG473N7C
RefSeq:XP_001990244.1 ProteinModelPortal:B4JF25 STRING:B4JF25
EnsemblMetazoa:FBtr0154645 GeneID:6563370 KEGG:dgr:Dgri_GH19231
FlyBase:FBgn0126697 InParanoid:B4JF25 OMA:FIAKKAM Uniprot:B4JF25
Length = 331
Score = 112 (44.5 bits), Expect = 0.00020, P = 0.00020
Identities = 39/164 (23%), Positives = 75/164 (45%)
Query: 40 ILIVGLNCKWKPHPIPSLSGKIATLQLCVDTKCL-ILQLLYMDCIPLSIKNFLSDPNVVF 98
++ + + +W P + GK + +Q+CVD +C + QL ++ IP ++ ++ P V
Sbjct: 134 VVPMAFDMEW-PFSFQTGPGKSSVIQICVDERCCYVYQLSKLNKIPAALAALINHPKVRL 192
Query: 99 VGIEVEEIMSKLKNEYGLC-----IKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLR 153
G+ ++ KL+ ++ I+K +D+ G+ L+ LA + +
Sbjct: 193 HGVNIKADFRKLERDFPEMSAEPLIEKCVDLGVWCNQVCETG--GRWSLERLANFIAKKA 250
Query: 154 PWKPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLLLEET 197
K KKV M+ LD + +A ID Y+ I ++ ET
Sbjct: 251 MDKSKKVRMSKWHVIPLDENQLMYAAIDVYIGQVIYREIEQRET 294
>UNIPROTKB|B4G5C9 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7234 "Drosophila persimilis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0045950
EMBL:CH479179 OrthoDB:EOG473N7C RefSeq:XP_002013809.1
ProteinModelPortal:B4G5C9 PRIDE:B4G5C9 GeneID:6588337
KEGG:dpe:Dper_GL23198 FlyBase:FBgn0160788 Uniprot:B4G5C9
Length = 355
Score = 112 (44.5 bits), Expect = 0.00022, P = 0.00022
Identities = 40/165 (24%), Positives = 73/165 (44%)
Query: 40 ILIVGLNCKWKPHPIPSLSGKIATLQLCVDTKCL-ILQLLYMDCIPLSIKNFLSDPNVVF 98
++ + + +W P + GK + +Q+CVD KC + QL + +P ++ ++ P V
Sbjct: 158 VVPMAFDMEW-PFSFQTGPGKSSVIQICVDEKCCYVYQLTNLKKLPAALVALINHPKVRL 216
Query: 99 VGIEVEEIMSKLKNEY-----GLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLR 153
G+ ++ KL+ ++ I+K +D+ G+ L+ LA + +
Sbjct: 217 HGVNIKADFRKLQRDFPEVSADALIEKCVDLGVWCNEICETG--GRWSLERLANFIAKKA 274
Query: 154 PWKPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLLLEETQ 198
K KKV M+ LD + +A ID Y+ I L E Q
Sbjct: 275 MDKSKKVRMSKWHVIPLDENQLMYAAIDVYIGQVIYRDLEQREKQ 319
>UNIPROTKB|Q299L3 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0005634
"nucleus" evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 EMBL:CM000070 SUPFAM:SSF53098 GO:GO:0008408
GenomeReviews:CM000070_GR GO:GO:0045950 eggNOG:NOG266861
OrthoDB:EOG473N7C RefSeq:XP_001358549.2 ProteinModelPortal:Q299L3
GeneID:4801455 KEGG:dpo:Dpse_GA20513 FlyBase:FBgn0080507
InParanoid:Q299L3 Uniprot:Q299L3
Length = 356
Score = 112 (44.5 bits), Expect = 0.00023, P = 0.00023
Identities = 40/165 (24%), Positives = 73/165 (44%)
Query: 40 ILIVGLNCKWKPHPIPSLSGKIATLQLCVDTKCL-ILQLLYMDCIPLSIKNFLSDPNVVF 98
++ + + +W P + GK + +Q+CVD KC + QL + +P ++ ++ P V
Sbjct: 159 VVPMAFDMEW-PFSFQTGPGKSSVIQICVDEKCCYVYQLTNLKKLPAALVALINHPKVRL 217
Query: 99 VGIEVEEIMSKLKNEY-----GLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLR 153
G+ ++ KL+ ++ I+K +D+ G+ L+ LA + +
Sbjct: 218 HGVNIKADFRKLQRDFPEVSADALIEKCVDLGVWCNEICETG--GRWSLERLANFIAKKA 275
Query: 154 PWKPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLLLEETQ 198
K KKV M+ LD + +A ID Y+ I L E Q
Sbjct: 276 MDKSKKVRMSKWHVIPLDENQLMYAAIDVYIGQVIYRDLEQREKQ 320
>UNIPROTKB|E1BXG2 [details] [associations]
symbol:EXD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 CTD:55218 OMA:QVIYAAR
GeneTree:ENSGT00390000014318 EMBL:AADN02003163 IPI:IPI00593059
RefSeq:NP_001186629.1 UniGene:Gga.9546 ProteinModelPortal:E1BXG2
Ensembl:ENSGALT00000015388 GeneID:423264 KEGG:gga:423264
NextBio:20825760 Uniprot:E1BXG2
Length = 621
Score = 114 (45.2 bits), Expect = 0.00029, P = 0.00029
Identities = 41/160 (25%), Positives = 79/160 (49%)
Query: 42 IVGLNCKWKPHPIPSLSGKIATLQLC-VDTKCLILQLLYMDC----IPLSIKNFLSDPNV 96
++G++C+W + + ++ LQ+ C++++L + +P ++ + ++D V
Sbjct: 106 VLGMDCEWVS--VEGKANPVSLLQMASASGLCVLVRLPRLVASGQPVPKTLLDIMADDAV 163
Query: 97 VFVGIEVEEIMSKLKNEYGLCIKKKIDVRTLA---KLHFPISCLGKPGLKVLAYQLLRLR 153
+ VG+ E KL +Y L +K +D+R LA + +CL LK LA ++L
Sbjct: 164 LKVGVGCWEDACKLLQDYSLPVKGSVDLRYLAMRQRKDLLHNCLS---LKSLAEKVLNCP 220
Query: 154 PWKPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLL 193
K + +N E+ L + + +A DA VS A+ LL
Sbjct: 221 LDKSPHMRCSNWEAEELTQDQVLYAARDAQVSVALFLHLL 260
>UNIPROTKB|C9JLF4 [details] [associations]
symbol:EXD2 "Exonuclease 3'-5' domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 EMBL:AL359317 HGNC:HGNC:20217
ChiTaRS:EXD2 IPI:IPI00916247 ProteinModelPortal:C9JLF4 SMR:C9JLF4
STRING:C9JLF4 Ensembl:ENST00000413191 HOGENOM:HOG000122146
ArrayExpress:C9JLF4 Bgee:C9JLF4 Uniprot:C9JLF4
Length = 114
Score = 89 (36.4 bits), Expect = 0.00056, P = 0.00056
Identities = 26/84 (30%), Positives = 47/84 (55%)
Query: 72 CLILQLLYMDC----IPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEYGLCIKKKIDVRTL 127
C++++L + C +P ++ + L+D ++ VG+ E SKL +YGL ++ +D+R L
Sbjct: 8 CVLVRLPKLICGGKTLPRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRGCLDLRYL 67
Query: 128 A-KLHFPISCLGKPGLKVLAYQLL 150
A + + C G LK LA +L
Sbjct: 68 AMRQRNNLLCNGL-SLKSLAETVL 90
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.141 0.436 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 198 189 0.00089 110 3 11 22 0.39 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 605 (64 KB)
Total size of DFA: 169 KB (2098 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.13u 0.14s 16.27t Elapsed: 00:00:01
Total cpu time: 16.14u 0.14s 16.28t Elapsed: 00:00:01
Start: Fri May 10 17:24:24 2013 End: Fri May 10 17:24:25 2013