BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037014
(198 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84LH3|WEX_ARATH Werner Syndrome-like exonuclease OS=Arabidopsis thaliana GN=WEX
PE=1 SV=1
Length = 288
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 5/183 (2%)
Query: 6 SISFCGKIIETTVTSTTSVAENWLLKI--RSLHSAQILIVGLNCKWKPHPIPS-LSGKIA 62
++ F G+I+ + + L+K+ + I VGL+ +W+P L GK+A
Sbjct: 91 AMRFGGRILYSKTATEVDKRAMQLIKVLDTKRDESGIAFVGLDIEWRPSFRKGVLPGKVA 150
Query: 63 TLQLCVDTKCLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
T+Q+CVD+ + ++ IP S+++ + D +V VGI ++ KL ++YG+ IK
Sbjct: 151 TVQICVDSNYCDVMHIFHSGIPQSLQHLIEDSTLVKVGIGIDGDSVKLFHDYGVSIKDVE 210
Query: 123 DVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACIDA 182
D+ LA I K GL L L+ KP ++ + N E L + +++A DA
Sbjct: 211 DLSDLANQK--IGGDKKWGLASLTETLVCKELLKPNRIRLGNWEFYPLSKQQLQYAATDA 268
Query: 183 YVS 185
Y S
Sbjct: 269 YAS 271
>sp|O93530|WRN_XENLA Werner syndrome ATP-dependent helicase homolog OS=Xenopus laevis
GN=wrn PE=2 SV=1
Length = 1436
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Query: 42 IVGLNCKWKPHPIPSLSGKIATLQLCV-DTKCLILQLLYMDCIPLSIKNFLSDPNVVFVG 100
++G + +W P +GK+A +Q+CV + KC + + M P +K L D +V VG
Sbjct: 72 VLGFDIEWPPVYTKGKTGKVALIQVCVSEKKCYLFHISPMAGFPKGLKRLLEDESVRKVG 131
Query: 101 IEVEEIMSKLKNEYGLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKV 160
+ +E KL ++Y L +K I++ +A + C K L L + + +K K
Sbjct: 132 VGIEGDQWKLMSDYELKLKGFIELSEMANQK--LRCKEKWTFNGLIKHLFKEQLYKRKSY 189
Query: 161 CMNNLESGFLDTELIKFACIDAYVSCAIGTKL 192
+N + L + +A DAY I KL
Sbjct: 190 RCSNWDIFLLTEDQKLYAATDAYAGLLIYKKL 221
>sp|Q5UQM4|YR431_MIMIV Putative 3'-5' exonuclease R431 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R431 PE=4 SV=1
Length = 399
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 14/186 (7%)
Query: 18 VTSTTSVAENWLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIATLQLCVDTKCLILQL 77
VTS + +NW+ +++ + I+GL+ + I S KI+ +QL +I+Q+
Sbjct: 114 VTSDFQIVDNWIE--NNIYDLKQEIIGLDTE---TLISGKSEKISIIQLSTSKHNIIIQV 168
Query: 78 LYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEYGLC--IKKKIDVRTLAKL----- 130
M+ +P ++ D +++ VG+ ++ KL + IKK +D+ L K
Sbjct: 169 NQMNTLPQNLNKVFFDESIIKVGVAIDIDAKKLLQYFPTINQIKKTLDLSDLFKQTNFTK 228
Query: 131 HFPISCLGKPGLKVLAYQLLRL--RPWKPKKVCMNNLESGFLDTELIKFACIDAYVSCAI 188
H I+ GLK+LA +L L ++ +N + L ++ +K+A D+Y+S I
Sbjct: 229 HISINPKESIGLKILAAHVLDLYIENKGDSEIKKSNWNNPVLTSDQVKYAITDSYLSLMI 288
Query: 189 GTKLLL 194
+L L
Sbjct: 289 YNELQL 294
>sp|Q9NVH0|EXD2_HUMAN Exonuclease 3'-5' domain-containing protein 2 OS=Homo sapiens
GN=EXD2 PE=1 SV=2
Length = 621
Score = 48.1 bits (113), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 42 IVGLNCKWKPHPIPSLSGKIATLQLCVDTK----CLILQLLYMDC----IPLSIKNFLSD 93
++G++C+W +L GK + L L C++++L + C +P ++ + L+D
Sbjct: 104 VLGIDCEWV-----NLEGKASPLSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILAD 158
Query: 94 PNVVFVGIEVEEIMSKLKNEYGLCIKKKIDVRTLA-KLHFPISCLGKPGLKVLAYQLLRL 152
++ VG+ E SKL +YGL ++ +D+R LA + + C G LK LA +L
Sbjct: 159 GTILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGL-SLKSLAETVLNF 217
Query: 153 RPWKPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLL 193
K + +N ++ L + + +A DA +S A+ LL
Sbjct: 218 PLDKSLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHLL 258
>sp|O09053|WRN_MOUSE Werner syndrome ATP-dependent helicase homolog OS=Mus musculus
GN=Wrn PE=1 SV=3
Length = 1401
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 7 ISFCGKIIETTVTSTTSVAENWLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIATLQL 66
+ F G I+ + S S +L + S+ + +VG + +W P P ++A +QL
Sbjct: 41 LEFPGSIVYSYEASDCS----FLSEDISMRLSDGDVVGFDMEWPPIYKPGKRSRVAVIQL 96
Query: 67 CV-DTKCLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEYGLCIKKKIDVR 125
CV ++KC + + M P +K L + ++ G+ +E KL ++ + ++ +++
Sbjct: 97 CVSESKCYLFHISSMSVFPQGLKMLLENKSIKKAGVGIEGDQWKLLRDFDVKLESFVELT 156
Query: 126 TLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIK-FACIDAYV 184
+A + + C L L +L + K K + +N S F TE K +A DAY
Sbjct: 157 DVA--NEKLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNW-SNFPLTEDQKLYAATDAYA 213
Query: 185 SCAIGTKL 192
I KL
Sbjct: 214 GLIIYQKL 221
>sp|Q14191|WRN_HUMAN Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1
SV=2
Length = 1432
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 8/193 (4%)
Query: 7 ISFCGKIIETTVTSTTSVAENWLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIATLQL 66
+ F G I+ + S S +L + S+ + +VG + +W P GK+A +QL
Sbjct: 47 LEFTGSIVYSYDASDCS----FLSEDISMSLSDGDVVGFDMEWPPLYNRGKLGKVALIQL 102
Query: 67 CV-DTKCLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEYGLCIKKKIDVR 125
CV ++KC + + M P +K L + V G+ +E KL ++ + +K +++
Sbjct: 103 CVSESKCYLFHVSSMSVFPQGLKMLLENKAVKKAGVGIEGDQWKLLRDFDIKLKNFVELT 162
Query: 126 TLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACIDAYVS 185
+A + + C L L LL + K K + +N L + +A DAY
Sbjct: 163 DVA--NKKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAG 220
Query: 186 CAIGTKL-LLEET 197
I L +L++T
Sbjct: 221 FIIYRNLEILDDT 233
>sp|B3LWP6|WRNXO_DROAN Werner Syndrome-like exonuclease OS=Drosophila ananassae GN=WRNexo
PE=3 SV=2
Length = 355
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 9/196 (4%)
Query: 7 ISFCGKIIETTVTSTTSVAENWLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIATLQL 66
I + G I T + + + + +++ ++ + + +W P + GK + +Q+
Sbjct: 125 IKYKGAIKYYTESQDIAASADDVMQWVEKQKEDVVPMAFDMEW-PFSFQTGPGKSSVIQI 183
Query: 67 CVDTK-CLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEY-----GLCIKK 120
CVD K C I QL + +P ++ ++ P V G+ ++ KL+ ++ I+K
Sbjct: 184 CVDEKCCYIYQLTNLKKLPSALVALINHPKVRLHGVNIKADFRKLQRDFPEVSADALIEK 243
Query: 121 KIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACI 180
+D+ + G+ L+ LA + R K KKV M+ LD + +A I
Sbjct: 244 CVDLGVWCNVI--CQTGGRWSLERLANFICRKAMDKSKKVRMSKWHVIPLDENQLMYAAI 301
Query: 181 DAYVSCAIGTKLLLEE 196
D Y+ I L E
Sbjct: 302 DVYIGQVIYRDLEQRE 317
>sp|B4JF25|WRNXO_DROGR Werner Syndrome-like exonuclease OS=Drosophila grimshawi GN=WRNexo
PE=3 SV=1
Length = 331
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 7 ISFCGKIIETTVTSTTSVAENWLLK-IRSLHSAQILIVGLNCKWKPHPIPSLSGKIATLQ 65
I + G I T + + + + +++ + + ++ + + +W P + GK + +Q
Sbjct: 100 IKYSGAIKYFTESQEIAASADEVMQWVEKQINMDVVPMAFDMEW-PFSFQTGPGKSSVIQ 158
Query: 66 LCVDTKC-LILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEYGLC-----IK 119
+CVD +C + QL ++ IP ++ ++ P V G+ ++ KL+ ++ I+
Sbjct: 159 ICVDERCCYVYQLSKLNKIPAALAALINHPKVRLHGVNIKADFRKLERDFPEMSAEPLIE 218
Query: 120 KKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFAC 179
K +D+ + G+ L+ LA + + K KKV M+ LD + +A
Sbjct: 219 KCVDLGVWC--NQVCETGGRWSLERLANFIAKKAMDKSKKVRMSKWHVIPLDENQLMYAA 276
Query: 180 IDAYVSCAIGTKLLLEET 197
ID Y+ I ++ ET
Sbjct: 277 IDVYIGQVIYREIEQRET 294
>sp|B4G5C9|WRNXO_DROPE Werner Syndrome-like exonuclease OS=Drosophila persimilis GN=WRNexo
PE=3 SV=2
Length = 355
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 9/165 (5%)
Query: 40 ILIVGLNCKWKPHPIPSLSGKIATLQLCVDTK-CLILQLLYMDCIPLSIKNFLSDPNVVF 98
++ + + +W P + GK + +Q+CVD K C + QL + +P ++ ++ P V
Sbjct: 158 VVPMAFDMEW-PFSFQTGPGKSSVIQICVDEKCCYVYQLTNLKKLPAALVALINHPKVRL 216
Query: 99 VGIEVEEIMSKLKNEY-----GLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLR 153
G+ ++ KL+ ++ I+K +D+ + G+ L+ LA + +
Sbjct: 217 HGVNIKADFRKLQRDFPEVSADALIEKCVDLGVW--CNEICETGGRWSLERLANFIAKKA 274
Query: 154 PWKPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLLLEETQ 198
K KKV M+ LD + +A ID Y+ I L E Q
Sbjct: 275 MDKSKKVRMSKWHVIPLDENQLMYAAIDVYIGQVIYRDLEQREKQ 319
>sp|Q9VE86|WRNXO_DROME Werner Syndrome-like exonuclease OS=Drosophila melanogaster
GN=WRNexo PE=1 SV=2
Length = 353
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 7 ISFCGKIIETTVTSTTSVAENWLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIATLQL 66
I + G I T + + + + +L+ +++ + + +W P + GK A +Q+
Sbjct: 123 IKYKGAIKYFTESQDIAASADDVLQWVEKQKDEVVPMAFDMEW-PFSFQTGPGKSAVIQI 181
Query: 67 CVDTK-CLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEY 114
CVD K C I QL + +P ++ ++ P V G+ ++ KL ++
Sbjct: 182 CVDEKCCYIYQLTNVKKLPAALVALINHPKVRLHGVNIKNDFRKLARDF 230
>sp|Q299L3|WRNXO_DROPS Werner Syndrome-like exonuclease OS=Drosophila pseudoobscura
pseudoobscura GN=WRNexo PE=3 SV=2
Length = 356
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 9/165 (5%)
Query: 40 ILIVGLNCKWKPHPIPSLSGKIATLQLCVDTK-CLILQLLYMDCIPLSIKNFLSDPNVVF 98
++ + + +W P + GK + +Q+CVD K C + QL + +P ++ ++ P V
Sbjct: 159 VVPMAFDMEW-PFSFQTGPGKSSVIQICVDEKCCYVYQLTNLKKLPAALVALINHPKVRL 217
Query: 99 VGIEVEEIMSKLKNEY-----GLCIKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLR 153
G+ ++ KL+ ++ I+K +D+ + G+ L+ LA + +
Sbjct: 218 HGVNIKADFRKLQRDFPEVSADALIEKCVDLGVW--CNEICETGGRWSLERLANFIAKKA 275
Query: 154 PWKPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLLLEETQ 198
K KKV M+ LD + +A ID Y+ I L E Q
Sbjct: 276 MDKSKKVRMSKWHVIPLDENQLMYAAIDVYIGQVIYRDLEQREKQ 320
>sp|B4K934|WRNXO_DROMO Werner Syndrome-like exonuclease OS=Drosophila mojavensis GN=WRNexo
PE=3 SV=1
Length = 329
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 39 QILIVGLNCKWKPHPIPSLSGKIATLQLCVDTKC-LILQLLYMDCIPLSIKNFLSDPNVV 97
+I+ + + +W P + GK + +Q+CVD +C + QL + IP ++ ++ P V
Sbjct: 131 EIVPMAFDMEW-PFSFQTGPGKSSVIQICVDERCCYVYQLSNLKKIPAALVALINHPKVR 189
Query: 98 FVGIEVEEIMSKLKNEYGLC-----IKKKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRL 152
G+ ++ KL ++ I+K +D+ + G+ L+ LA + +
Sbjct: 190 LHGVNIKADFRKLARDFPEVAAEPLIEKCVDLGVWC--NEVCETGGRWSLERLANFIAKK 247
Query: 153 RPWKPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLLLEE 196
K KKV M+ LD + +A ID Y+ I ++ E
Sbjct: 248 AMDKSKKVRMSKWHVIPLDENQLMYAAIDVYIGQVIYREIEQRE 291
>sp|B4PLB3|WRNXO_DROYA Werner Syndrome-like exonuclease OS=Drosophila yakuba GN=WRNexo
PE=3 SV=1
Length = 354
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 7 ISFCGKIIETTVTSTTSVAENWLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIATLQL 66
I + G I T + + + +L+ +++ + + +W P + GK A +Q+
Sbjct: 124 IKYKGAIKYYTENQDIAASADDVLQWVEKQKDEVVPMAFDMEW-PFSFQTGPGKSAVIQI 182
Query: 67 CVDTK-CLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEY 114
CVD K C I QL + +P + ++ P V G+ ++ KL ++
Sbjct: 183 CVDEKCCYIYQLTNLKKLPAVLVALINHPKVRLHGVNIKNDFRKLARDF 231
>sp|B4I298|WRNXO_DROSE Werner Syndrome-like exonuclease OS=Drosophila sechellia GN=WRNexo
PE=3 SV=2
Length = 354
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 7 ISFCGKIIETTVTSTTSVAENWLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIATLQL 66
I + G I T + + + + +L+ ++ + + +W P + GK + +Q+
Sbjct: 124 IKYKGAIKYFTESQDIAASADDVLQWVEKQKDDVVPMAFDMEW-PFSFQTGPGKSSVIQI 182
Query: 67 CVDTK-CLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEY 114
CVD K C I QL + +P ++ ++ P V G+ ++ KL ++
Sbjct: 183 CVDEKCCYIYQLTNVKKLPAALVALINHPKVRLHGVNIKNDFRKLARDF 231
>sp|B4QUF6|WRNXO_DROSI Werner Syndrome-like exonuclease OS=Drosophila simulans GN=WRNexo
PE=3 SV=1
Length = 354
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 7 ISFCGKIIETTVTSTTSVAENWLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIATLQL 66
I + G I T + + + + +L+ ++ + + +W P + GK + +Q+
Sbjct: 124 IKYKGAIKYFTESQDIAASADDVLQWVEKQKDDVVPMAFDMEW-PFSFQTGPGKSSVIQI 182
Query: 67 CVDTK-CLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEY 114
CVD K C I QL + +P ++ ++ P V G+ ++ KL ++
Sbjct: 183 CVDEKCCYIYQLTNVKKLPAALVALINHPKVRLHGVNIKNDFRKLARDF 231
>sp|B4N9D3|WRNXO_DROWI Werner Syndrome-like exonuclease OS=Drosophila willistoni GN=WRNexo
PE=3 SV=2
Length = 356
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 12/175 (6%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIATLQLCVDTKC-LILQLLYMDCIPLS 86
W+ K +L ++ + + +W P + GK + +Q+CVD +C + QL + +P +
Sbjct: 150 WIDKQTTLD---VVPMAFDMEW-PFSFQTGPGKSSVIQVCVDERCCYVYQLSKLKKLPAA 205
Query: 87 IKNFLSDPNVVFVGIEVEEIMSKLKNEY-----GLCIKKKIDVRTLAKLHFPISCLGKPG 141
+ L+ P V G+ ++ KL+ ++ I+K +D+ + G+
Sbjct: 206 LVALLNHPKVRLHGVNIKADFRKLQRDFPEVSADPLIEKCVDLGVWC--NEICETGGRWS 263
Query: 142 LKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLLLEE 196
L+ LA + + K KKV M+ LD + +A ID Y+ I L E
Sbjct: 264 LERLANFIAKKAMDKSKKVRMSKWHVIPLDENQLMYAAIDVYIGQVIYRDLEQRE 318
>sp|Q9FNG3|Y5645_ARATH Uncharacterized protein At5g06450 OS=Arabidopsis thaliana
GN=At5g06450 PE=1 SV=1
Length = 206
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 61 IATLQLCVDTKCLILQLL--YMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEYGLCI 118
+++++L CL L+L + D + + F + V FVG+++EE + L+ +GL I
Sbjct: 73 LSSVKLSTRNLCLFLRLPKPFHDNLK-DLYRFFASKFVTFVGVQIEEDLDLLRENHGLVI 131
Query: 119 KKKIDVRTLAKLHFPISCLGKPGLKVLAYQLL 150
+ I+V LA L G + LA+++L
Sbjct: 132 RNAINVGKLAAEARGTLVLEFLGTRELAHRVL 163
>sp|Q8VEG4|EXD2_MOUSE Exonuclease 3'-5' domain-containing protein 2 OS=Mus musculus
GN=Exd2 PE=2 SV=1
Length = 496
Score = 37.7 bits (86), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 83 IPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEYGLCIKKKIDVRTLA-KLHFPISCLGKPG 141
+P ++ + L+D ++ VG+ E +KL +YGL ++ +D+R LA K I C G
Sbjct: 23 LPRTLLDILADGAILKVGVGCSEDANKLLQDYGLIVRGCLDLRYLAMKQGNNILCNGL-S 81
Query: 142 LKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACIDAYVSCAIGTKLL 193
LK LA +L K + +N ++ L + + +A DA +S A+ LL
Sbjct: 82 LKSLAETILNFPLDKSLLLRCSNWDAENLTEDQVTYAARDAQISVALFLHLL 133
>sp|B4M401|WRNXO_DROVI Werner Syndrome-like exonuclease OS=Drosophila virilis GN=WRNexo
PE=3 SV=2
Length = 330
Score = 37.7 bits (86), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 10/189 (5%)
Query: 7 ISFCGKIIETTVTSTTSVAENWLLK-IRSLHSAQILIVGLNCKWKPHPIPSLSGKIATLQ 65
I + G I T + + + + +++ + +A ++ + + +W P + GK + +Q
Sbjct: 99 IKYRGAIKYYTESHEIAASADEVMQWVEKQTNADVVPLAFDMEW-PFSFQTGPGKSSVIQ 157
Query: 66 LCVDTKC-LILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEYGLC-----IK 119
+CV+ +C + QL + IP ++ L+ V G+ ++ KL+ ++ I+
Sbjct: 158 ICVEERCCYVYQLSKLKRIPAALVALLNHSKVRLHGVNIKADFRKLERDFPEVAAEPLIE 217
Query: 120 KKIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFAC 179
K ID+ + G+ L+ LA + + K KKV M+ LD + +A
Sbjct: 218 KCIDLGVW--CNEVCETGGRWSLERLANFIAKKAMDKSKKVRMSKWHVIPLDENQLMYAA 275
Query: 180 IDAYVSCAI 188
ID Y+ I
Sbjct: 276 IDVYIGQVI 284
>sp|B3NZ68|WRNXO_DROER Werner Syndrome-like exonuclease OS=Drosophila erecta GN=WRNexo
PE=3 SV=1
Length = 354
Score = 37.4 bits (85), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 9/196 (4%)
Query: 7 ISFCGKIIETTVTSTTSVAENWLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIATLQL 66
I + G I T + + + + +L+ +++ + + +W P + GK A +Q+
Sbjct: 124 IKYKGAIKYYTESQDIAASADDVLQWVEKQKDEVVPMAFDMEW-PFSFQTGPGKSAVIQI 182
Query: 67 CVDTK-CLILQLLYMDCIPLSIKNFLSDPNVVFVGIEVEEIMSKLKNEYGLC-----IKK 120
CVD K C I QL + +P + ++ V G+ ++ KL ++ I+K
Sbjct: 183 CVDEKCCYIYQLTNLKKLPAVLVALINHSKVRLHGVNIKNDFRKLARDFPEVSAEPLIEK 242
Query: 121 KIDVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACI 180
+D+ + G+ L+ L + + K KKV M+ LD + +A I
Sbjct: 243 CVDLGVWC--NEVCETGGRWSLERLTNFIAKKAMDKSKKVRMSKWHVIPLDENQLMYAAI 300
Query: 181 DAYVSCAIGTKLLLEE 196
D Y+ I +L E
Sbjct: 301 DVYIGQVIYRELERRE 316
>sp|P0CC99|NU2C2_TOBAC NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic
OS=Nicotiana tabacum GN=ndhB2 PE=2 SV=1
Length = 510
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
WL I S S + I L +W+ P+ S SG T L L T C+ L +
Sbjct: 59 WLYFISS-TSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV +E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGY-----TKK 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
DVR+ A + + + +G +L Y L ++ + + +G ++T++ I
Sbjct: 173 DVRSNEATMKYLL--MGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ IG KL L
Sbjct: 231 IALIFITVGIGFKLSL 246
>sp|P0CC98|NU2C1_TOBAC NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic
OS=Nicotiana tabacum GN=ndhB1 PE=2 SV=1
Length = 510
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
WL I S S + I L +W+ P+ S SG T L L T C+ L +
Sbjct: 59 WLYFISS-TSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV +E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGY-----TKK 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
DVR+ A + + + +G +L Y L ++ + + +G ++T++ I
Sbjct: 173 DVRSNEATMKYLL--MGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ IG KL L
Sbjct: 231 IALIFITVGIGFKLSL 246
>sp|P0CC33|NU2C2_ARATH NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic
OS=Arabidopsis thaliana GN=ndhB2 PE=2 SV=1
Length = 512
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 80/196 (40%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
WL I S S + I L +W+ P+ S SG T L L T C+ L +
Sbjct: 59 WLYFISS-TSFVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV +E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFILTATLGGMFLCGANDLITIFVALECFSLCSYLLSGY-----TKK 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
D+R+ A + + + +G +L Y L ++ + + +G ++T++ I
Sbjct: 173 DIRSNEATMKYLL--MGGASSSILVYGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ IG KL L
Sbjct: 231 IALIFITVGIGFKLSL 246
>sp|P0CC32|NU2C1_ARATH NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic
OS=Arabidopsis thaliana GN=ndhB1 PE=2 SV=1
Length = 512
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 80/196 (40%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
WL I S S + I L +W+ P+ S SG T L L T C+ L +
Sbjct: 59 WLYFISS-TSFVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV +E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFILTATLGGMFLCGANDLITIFVALECFSLCSYLLSGY-----TKK 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
D+R+ A + + + +G +L Y L ++ + + +G ++T++ I
Sbjct: 173 DIRSNEATMKYLL--MGGASSSILVYGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ IG KL L
Sbjct: 231 IALIFITVGIGFKLSL 246
>sp|P0CD23|NU2C2_ORYSJ NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Oryza
sativa subsp. japonica GN=ndhB2 PE=2 SV=1
Length = 510
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
W I S S I I L +W+ PI S SG T L L T C+ L +
Sbjct: 59 WFYFISS-TSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV +E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
D+R+ A + + + +G +L Y L ++ + + +G ++T++ I
Sbjct: 173 DLRSNEATMKYLL--MGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ +G KL L
Sbjct: 231 IALIFITVGLGFKLSL 246
>sp|P0CD21|NU2C2_ORYSI NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Oryza
sativa subsp. indica GN=ndhB2 PE=3 SV=1
Length = 510
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
W I S S I I L +W+ PI S SG T L L T C+ L +
Sbjct: 59 WFYFISS-TSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV +E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
D+R+ A + + + +G +L Y L ++ + + +G ++T++ I
Sbjct: 173 DLRSNEATMKYLL--MGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ +G KL L
Sbjct: 231 IALIFITVGLGFKLSL 246
>sp|P0CD19|NU2C2_ORYSA NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Oryza
sativa GN=ndhB2 PE=3 SV=1
Length = 510
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
W I S S I I L +W+ PI S SG T L L T C+ L +
Sbjct: 59 WFYFISS-TSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV +E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
D+R+ A + + + +G +L Y L ++ + + +G ++T++ I
Sbjct: 173 DLRSNEATMKYLL--MGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ +G KL L
Sbjct: 231 IALIFITVGLGFKLSL 246
>sp|P0CD22|NU2C1_ORYSJ NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Oryza
sativa subsp. japonica GN=ndhB1 PE=2 SV=1
Length = 510
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
W I S S I I L +W+ PI S SG T L L T C+ L +
Sbjct: 59 WFYFISS-TSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV +E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
D+R+ A + + + +G +L Y L ++ + + +G ++T++ I
Sbjct: 173 DLRSNEATMKYLL--MGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ +G KL L
Sbjct: 231 IALIFITVGLGFKLSL 246
>sp|P0CD20|NU2C1_ORYSI NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Oryza
sativa subsp. indica GN=ndhB1 PE=3 SV=1
Length = 510
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
W I S S I I L +W+ PI S SG T L L T C+ L +
Sbjct: 59 WFYFISS-TSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV +E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
D+R+ A + + + +G +L Y L ++ + + +G ++T++ I
Sbjct: 173 DLRSNEATMKYLL--MGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ +G KL L
Sbjct: 231 IALIFITVGLGFKLSL 246
>sp|P0CD18|NU2C1_ORYSA NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Oryza
sativa GN=ndhB1 PE=3 SV=1
Length = 510
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
W I S S I I L +W+ PI S SG T L L T C+ L +
Sbjct: 59 WFYFISS-TSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV +E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
D+R+ A + + + +G +L Y L ++ + + +G ++T++ I
Sbjct: 173 DLRSNEATMKYLL--MGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ +G KL L
Sbjct: 231 IALIFITVGLGFKLSL 246
>sp|P0CD59|NU2C2_MAIZE NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Zea
mays GN=ndhB2 PE=2 SV=1
Length = 510
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
W I S S I I L +W+ PI S SG T L L T C+ L +
Sbjct: 59 WFYFISS-TSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV +E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
D+R+ A + + + +G +L Y L ++ + + +G ++T++ I
Sbjct: 173 DLRSNEATMKYLL--MGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ +G KL L
Sbjct: 231 IALIFITVGLGFKLSL 246
>sp|P0CD58|NU2C1_MAIZE NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Zea
mays GN=ndhB1 PE=2 SV=1
Length = 510
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
W I S S I I L +W+ PI S SG T L L T C+ L +
Sbjct: 59 WFYFISS-TSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV +E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
D+R+ A + + + +G +L Y L ++ + + +G ++T++ I
Sbjct: 173 DLRSNEATMKYLL--MGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ +G KL L
Sbjct: 231 IALIFITVGLGFKLSL 246
>sp|P0CC73|NU2C2_HORVU NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic
OS=Hordeum vulgare GN=ndhB2 PE=2 SV=1
Length = 510
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
W I S S I I L +W+ PI S SG T L L T C+ L +
Sbjct: 59 WFYFISS-TSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV +E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
D+R+ A + + + +G +L Y L ++ + + +G ++T++ I
Sbjct: 173 DLRSNEATMKYLL--MGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ +G KL L
Sbjct: 231 IALIFITVGLGFKLSL 246
>sp|P0CC72|NU2C1_HORVU NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic
OS=Hordeum vulgare GN=ndhB1 PE=2 SV=1
Length = 510
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 79/196 (40%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
W I S S I I L +W+ PI S SG T L L T C+ L +
Sbjct: 59 WFYFISS-TSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV +E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
D+R+ A + + + +G +L Y L ++ + + +G ++T++ I
Sbjct: 173 DLRSNEATMKYLL--MGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ +G KL L
Sbjct: 231 IALIFITVGLGFKLSL 246
>sp|P0CD39|NU2C2_RANMC NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic
OS=Ranunculus macranthus GN=ndhB2 PE=3 SV=1
Length = 510
Score = 33.9 bits (76), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
WL I S S + I L +W+ P+ S SG T L L T C+ L +
Sbjct: 59 WLYFISST-SLVMSIAALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
DVR+ A + + + +G +L + L ++ + + +G ++T++ I
Sbjct: 173 DVRSNEATMKYLL--MGGASSSILVHGFSWLYGSSGGEIELQEIANGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLLEETQ 198
+++ IG KL L +
Sbjct: 231 IALIFITVGIGFKLSLAPSH 250
>sp|P0CD38|NU2C1_RANMC NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic
OS=Ranunculus macranthus GN=ndhB1 PE=3 SV=1
Length = 510
Score = 33.9 bits (76), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
WL I S S + I L +W+ P+ S SG T L L T C+ L +
Sbjct: 59 WLYFISST-SLVMSIAALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
DVR+ A + + + +G +L + L ++ + + +G ++T++ I
Sbjct: 173 DVRSNEATMKYLL--MGGASSSILVHGFSWLYGSSGGEIELQEIANGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLLEETQ 198
+++ IG KL L +
Sbjct: 231 IALIFITVGIGFKLSLAPSH 250
>sp|Q67IL7|NU2C_ANACO NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Ananas
comosus GN=ndhB PE=3 SV=2
Length = 510
Score = 33.5 bits (75), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 37/194 (19%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
W I S S I I L +W+ PI S SG T L L T C+ L +
Sbjct: 59 WFYFISS-TSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
DVR+ A + + + +G +L + L ++ + + +G ++T++ I
Sbjct: 173 DVRSNEATMKYLL--MGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKL 192
+++ IG KL
Sbjct: 231 IALIFITVGIGFKL 244
>sp|P0CD05|NU2C2_NYMAL NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic
OS=Nymphaea alba GN=ndhB2 PE=3 SV=1
Length = 510
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 41/196 (20%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
WL I S S + I L +W+ P+ S SG T L L T C+ L +
Sbjct: 59 WLYFISS-TSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTEL-----IK 176
DVR+ A + + + +G +L Y L ++ + + +G ++T++ I
Sbjct: 173 DVRSNEATMKYLL--MGGASSSILVYGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 177 FACIDAYVSCAIGTKL 192
A I ++ IG KL
Sbjct: 231 IALIS--ITVGIGFKL 244
>sp|P0CD04|NU2C1_NYMAL NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic
OS=Nymphaea alba GN=ndhB1 PE=3 SV=1
Length = 510
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 41/196 (20%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
WL I S S + I L +W+ P+ S SG T L L T C+ L +
Sbjct: 59 WLYFISS-TSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTEL-----IK 176
DVR+ A + + + +G +L Y L ++ + + +G ++T++ I
Sbjct: 173 DVRSNEATMKYLL--MGGASSSILVYGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 177 FACIDAYVSCAIGTKL 192
A I ++ IG KL
Sbjct: 231 IALIS--ITVGIGFKL 244
>sp|P0CC47|NU2C2_CITSI NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Citrus
sinensis GN=ndhB2 PE=3 SV=1
Length = 510
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
WL I S S + I L +W+ P+ S SG T L L T C+ L +
Sbjct: 59 WLYFISS-TSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGY-----TKK 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
DVR+ A + + + +G +L + L ++ + + +G ++T++ I
Sbjct: 173 DVRSNEATMKYLL--MGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLLEETQ 198
+++ IG KL L +
Sbjct: 231 IALIFITVGIGFKLSLAPSH 250
>sp|P0CC46|NU2C1_CITSI NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Citrus
sinensis GN=ndhB1 PE=3 SV=1
Length = 510
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
WL I S S + I L +W+ P+ S SG T L L T C+ L +
Sbjct: 59 WLYFISS-TSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGY-----TKK 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
DVR+ A + + + +G +L + L ++ + + +G ++T++ I
Sbjct: 173 DVRSNEATMKYLL--MGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLLEETQ 198
+++ IG KL L +
Sbjct: 231 IALIFITVGIGFKLSLAPSH 250
>sp|P0CC43|NU2C2_CERDE NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic
OS=Ceratophyllum demersum GN=ndhB2 PE=3 SV=1
Length = 510
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 75/193 (38%), Gaps = 35/193 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
WL I S S + I L +WK P+ S SG T L L T C+ L +
Sbjct: 59 WLYFISST-SLVMSITALLFRWKEEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDSITIFVAPECFSLCSYLLSGY-----TKR 172
Query: 123 DVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID- 181
DVR+ + +G +L + L ++ + + +G ++T++ I
Sbjct: 173 DVRS-NEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISI 231
Query: 182 --AYVSCAIGTKL 192
+++ IG KL
Sbjct: 232 ALIFITVGIGFKL 244
>sp|P0CC42|NU2C1_CERDE NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic
OS=Ceratophyllum demersum GN=ndhB1 PE=3 SV=1
Length = 510
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 75/193 (38%), Gaps = 35/193 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
WL I S S + I L +WK P+ S SG T L L T C+ L +
Sbjct: 59 WLYFISST-SLVMSITALLFRWKEEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDSITIFVAPECFSLCSYLLSGY-----TKR 172
Query: 123 DVRTLAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID- 181
DVR+ + +G +L + L ++ + + +G ++T++ I
Sbjct: 173 DVRS-NEATTKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISI 231
Query: 182 --AYVSCAIGTKL 192
+++ IG KL
Sbjct: 232 ALIFITVGIGFKL 244
>sp|P0CC55|NU2C2_DAUCA NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Daucus
carota GN=ndhB2 PE=3 SV=1
Length = 510
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 37/194 (19%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
WL I S S + I L +W+ P+ S SG T L L T C+ L +
Sbjct: 59 WLYFISS-TSLVMSITALLFRWREEPVISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGY-----TKK 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
DVR+ A + + + +G +L + L ++ + + +G ++T++ I
Sbjct: 173 DVRSNEATMKYLL--MGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKL 192
+++ IG KL
Sbjct: 231 IALIFITVGIGFKL 244
>sp|P0CC22|NU2C2_ACOCL NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Acorus
calamus GN=ndhB2 PE=3 SV=1
Length = 510
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 78/196 (39%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
W I S S + I L +W+ P+ S SG T L L T C+ L +
Sbjct: 59 WFYFISS-TSLVMSIAALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDSITIFVAPECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
DVR+ A + + + +G +L + L ++ + + +G ++T++ I
Sbjct: 173 DVRSNEATMKYLL--MGGASSSILVHGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ IG KL L
Sbjct: 231 IALIFITVGIGFKLSL 246
>sp|P0CC30|NU2C2_ACOAM NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Acorus
americanus GN=ndhB2 PE=3 SV=1
Length = 510
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 78/196 (39%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
W I S S + I L +W+ P+ S SG T L L T C+ L +
Sbjct: 59 WFYFISS-TSLVMSIAALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDSITIFVAPECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
DVR+ A + + + +G +L + L ++ + + +G ++T++ I
Sbjct: 173 DVRSNEATMKYLL--MGGASSSILVHGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ IG KL L
Sbjct: 231 IALIFITVGIGFKLSL 246
>sp|P0CC54|NU2C1_DAUCA NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Daucus
carota GN=ndhB1 PE=3 SV=1
Length = 510
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 37/194 (19%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
WL I S S + I L +W+ P+ S SG T L L T C+ L +
Sbjct: 59 WLYFISS-TSLVMSITALLFRWREEPVISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGY-----TKK 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
DVR+ A + + + +G +L + L ++ + + +G ++T++ I
Sbjct: 173 DVRSNEATMKYLL--MGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKL 192
+++ IG KL
Sbjct: 231 IALIFITVGIGFKL 244
>sp|P0CC21|NU2C1_ACOCL NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Acorus
calamus GN=ndhB1 PE=3 SV=1
Length = 510
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 78/196 (39%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
W I S S + I L +W+ P+ S SG T L L T C+ L +
Sbjct: 59 WFYFISS-TSLVMSIAALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDSITIFVAPECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
DVR+ A + + + +G +L + L ++ + + +G ++T++ I
Sbjct: 173 DVRSNEATMKYLL--MGGASSSILVHGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ IG KL L
Sbjct: 231 IALIFITVGIGFKLSL 246
>sp|P0CC20|NU2C1_ACOAM NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Acorus
americanus GN=ndhB1 PE=3 SV=1
Length = 510
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 78/196 (39%), Gaps = 37/196 (18%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
W I S S + I L +W+ P+ S SG T L L T C+ L +
Sbjct: 59 WFYFISS-TSLVMSIAALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL----------------SDPNVVFVGIEVEEIMSKLKNEYGLCIKKKI 122
Y++C ++I FL +D +FV E + S L + Y K
Sbjct: 118 YIECTEMAITEFLLFVLTATLGGMFLCGANDSITIFVAPECFSLCSYLLSGY-----TKR 172
Query: 123 DVRT-LAKLHFPISCLGKPGLKVLAYQLLRLRPWKPKKVCMNNLESGFLDTELIKFACID 181
DVR+ A + + + +G +L + L ++ + + +G ++T++ I
Sbjct: 173 DVRSNEATMKYLL--MGGASSSILVHGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGIS 230
Query: 182 ---AYVSCAIGTKLLL 194
+++ IG KL L
Sbjct: 231 IALIFITVGIGFKLSL 246
>sp|P0CD17|NU2C2_ORYNI NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Oryza
nivara GN=ndhB2 PE=3 SV=1
Length = 510
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 28 WLLKIRSLHSAQILIVGLNCKWKPHPIPSLSGKIAT---------LQLCVDTKCLILQLL 78
W I S S I I L +W+ PI S SG T L L T C+ L +
Sbjct: 59 WFYFISS-TSLVISITALLFRWREEPIISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVE 117
Query: 79 YMDCIPLSIKNFL 91
Y++C ++I FL
Sbjct: 118 YIECTEMAITEFL 130
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,283,290
Number of Sequences: 539616
Number of extensions: 2584604
Number of successful extensions: 7255
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 7097
Number of HSP's gapped (non-prelim): 179
length of query: 198
length of database: 191,569,459
effective HSP length: 111
effective length of query: 87
effective length of database: 131,672,083
effective search space: 11455471221
effective search space used: 11455471221
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 58 (26.9 bits)