BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037016
(70 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 58/62 (93%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGKIVI++I+NSTSRQVTFSKRR GL+KKAKELSILCDAEVGL +FSST +LYEF++T
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSST 60
Query: 61 RL 62
+
Sbjct: 61 NM 62
>sp|Q38840|AGL17_ARATH Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana
GN=AGL17 PE=2 SV=2
Length = 227
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 57/60 (95%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGKIVIQKI++STSRQVTFSKRRKGLIKKAKEL+ILCDAEV L IFS+T KLY+FA++
Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60
>sp|Q9SI38|ANR1_ARATH MADS-box transcription factor ANR1 OS=Arabidopsis thaliana
GN=ANR1 PE=1 SV=1
Length = 234
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFA 58
MGRGKIVI++I+NSTSRQVTFSKRR GL+KKAKELSILCDAEVG+ IFSST KLY++A
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYA 58
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 102 bits (255), Expect = 5e-22, Method: Composition-based stats.
Identities = 51/62 (82%), Positives = 59/62 (95%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGKIVIQ+I++STSRQVTFSKRRKGLIKKAKEL+ILCDAEVGL IFSST KLY+FA++
Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60
Query: 61 RL 62
+
Sbjct: 61 SM 62
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 57/62 (91%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGKI I++I+N+TSRQVTFSKRR GL KKA+ELSILCDAEVGL +FSST++LY+FA++
Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS 60
Query: 61 RL 62
+
Sbjct: 61 SM 62
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 98.2 bits (243), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/62 (75%), Positives = 57/62 (91%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGKIVI++I+NSTSRQVTFSKRR G+ KKAKEL+ILCDAEVGL IFSST +LYE+++T
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60
Query: 61 RL 62
+
Sbjct: 61 SM 62
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 97.8 bits (242), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/62 (74%), Positives = 57/62 (91%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGKI I++INNSTSRQVTFSKRR GL+KKAKEL+ILCDAEVG+ IFSST +LY+F+++
Sbjct: 1 MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60
Query: 61 RL 62
+
Sbjct: 61 SM 62
>sp|Q9M2K8|AGL18_ARATH Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana
GN=AGL18 PE=2 SV=1
Length = 256
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 50/58 (86%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFA 58
MGRG+I I+KI N SRQVTFSKRR GLIKKAKELSILCDAEV L IFSST K+Y+F+
Sbjct: 1 MGRGRIEIKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFS 58
>sp|Q40702|MADS2_ORYSJ MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica
GN=MADS2 PE=2 SV=1
Length = 209
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 51/57 (89%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEF 57
MGRGKI I++I NST+RQVTFSKRR G++KKA+E+S+LCDAEVG+ IFSS KLY++
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDY 57
>sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1
Length = 237
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 52/58 (89%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFA 58
MGRGKI I++I N+T+RQVTFSKRR GL+KKA ELS+LCDAE+GL IFSS+ KL+E++
Sbjct: 1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYS 58
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 51/62 (82%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGKI I++I NST+RQVTF KRR GL+KKA ELS+LCDAEV L +FS+ +LYE+AN
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
Query: 61 RL 62
+
Sbjct: 61 NI 62
>sp|Q8RYD9|TT16_ARATH Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1
SV=1
Length = 252
Score = 91.3 bits (225), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/61 (68%), Positives = 50/61 (81%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGKI I+KI N T+RQVTFSKRR GLIKK +ELSILCDA +GL +FS+T KL EF +
Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60
Query: 61 R 61
+
Sbjct: 61 Q 61
>sp|Q84NC5|MAD25_ORYSJ MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica
GN=MADS25 PE=2 SV=2
Length = 227
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 55/62 (88%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGKI I++I+N+ +RQVTFSKRR GL+KKA+EL+ILCDA+VGL +FS T +LY+F+++
Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSS 60
Query: 61 RL 62
+
Sbjct: 61 SM 62
>sp|Q2QW53|MAD13_ORYSJ MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica
GN=MADS13 PE=1 SV=2
Length = 270
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 50/60 (83%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRG+I I++I N+TSRQVTF KRR GL+KKA ELS+LCDAEV L +FSS +LYE++N
Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 56/67 (83%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGKI I++I N+ SRQVTFSKRR GL+KKA+ELS+LCDAEV + +FS + KL+E+++T
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSST 60
Query: 61 RLLCSLT 67
+ +L+
Sbjct: 61 GMKQTLS 67
>sp|Q8VWM8|M17_MAIZE MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1
Length = 259
Score = 89.7 bits (221), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/66 (65%), Positives = 54/66 (81%), Gaps = 2/66 (3%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGKI I++I NST+RQVTFSKRR GL+KKA EL++LCDA VG+ IFSST K++E+ +
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60
Query: 61 RLLCSL 66
CSL
Sbjct: 61 A--CSL 64
>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15
PE=3 SV=1
Length = 264
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 52/62 (83%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGKI I++I N+ SRQVTFSKRR GL+KKA ELS+LCDAEV + +FS + KL+EF++T
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSST 60
Query: 61 RL 62
+
Sbjct: 61 SM 62
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 50/60 (83%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
+GRGKI I++I N+T+RQVTF KRR GL+KKA ELS+LCDAEV L +FSS +LYE+AN
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 76
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1
SV=1
Length = 242
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 50/60 (83%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
+GRGKI I++I N+T+RQVTF KRR GL+KKA ELS+LCDAEV L +FSS +LYE+AN
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 76
>sp|Q6H711|MAD29_ORYSJ MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica
GN=MADS29 PE=2 SV=1
Length = 260
Score = 89.0 bits (219), Expect = 7e-18, Method: Composition-based stats.
Identities = 42/66 (63%), Positives = 54/66 (81%), Gaps = 2/66 (3%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGKI I++I N+T+RQVTFSKRR GL+KKA EL++LCDA VG+ IFSST K++E+ +
Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60
Query: 61 RLLCSL 66
CSL
Sbjct: 61 T--CSL 64
>sp|P29381|AGL1_ARATH Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana
GN=AGL1 PE=1 SV=1
Length = 248
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 50/60 (83%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
+GRGKI I++I N+T+RQVTF KRR GL+KKA ELS+LCDAEV L IFS+ +LYE+AN
Sbjct: 16 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 53/62 (85%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
M R KI I+KI+N+T+RQVTFSKRR+GL KKA+ELS+LCDA+V L IFSST KL+EF ++
Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60
Query: 61 RL 62
+
Sbjct: 61 SM 62
>sp|P29385|AGL5_ARATH Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana
GN=AGL5 PE=1 SV=1
Length = 246
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 50/60 (83%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
+GRGKI I++I N+T+RQVTF KRR GL+KKA ELS+LCDAEV L IFS+ +LYE+AN
Sbjct: 16 IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 54/62 (87%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
M R KI I+KI+NST+RQVTFSKRR+GL KKA+ELS+LCDA+V L IFSST KL++++++
Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSS 60
Query: 61 RL 62
+
Sbjct: 61 SM 62
>sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog OS=Solanum
lycopersicum GN=TDR4 PE=2 SV=1
Length = 227
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 50/59 (84%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFAN 59
MGRG++ +++I N +RQVTFSKRR GL+KKA E+S+LCDAEVGL +FS+ KL+E+AN
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAN 59
>sp|O82794|AGL24_ARATH MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1
Length = 220
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 53/62 (85%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
M R KI I+KI+N T+RQVTFSKRR+G+ KKA ELS+LCDA+V L IFS+T KL+EF+++
Sbjct: 1 MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSS 60
Query: 61 RL 62
R+
Sbjct: 61 RM 62
>sp|Q03488|FBP1_PETHY Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1
Length = 210
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 55/63 (87%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGKI I++I NS++RQVT+SKRR G++KKAKE+S+LCDA V + IF+S+ K++EF++T
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSST 60
Query: 61 RLL 63
L+
Sbjct: 61 SLV 63
>sp|Q03416|GLOB_TOBAC Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2
SV=1
Length = 209
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 55/63 (87%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGKI I++I NS++RQVT+SKRR G++KKAKE+S+LCDA V + IF+S+ K++EF++T
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSST 60
Query: 61 RLL 63
L+
Sbjct: 61 SLV 63
>sp|Q6Q9H6|MAD34_ORYSJ MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica
GN=MADS34 PE=2 SV=2
Length = 239
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/60 (65%), Positives = 50/60 (83%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGK+V+Q+I N SRQVTF+KRR GL+KKA ELSILCDAEV L +FS +LY+F+++
Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 50/60 (83%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
+GRGKI I++I N+T+RQVTF KRR GL+KKA ELS+LCDAEV L +FS+ +LYE+AN
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 76
>sp|Q5K4R0|MAD47_ORYSJ MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica
GN=MADS47 PE=1 SV=2
Length = 246
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 52/60 (86%)
Query: 3 RGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANTRL 62
R +I I++I+N +RQVTFSKRR+GL KKA+ELSILCDAEVGL +FS+T KL++FA+T +
Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSM 81
>sp|Q01540|AG_BRANA Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2
SV=1
Length = 252
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 49/59 (83%)
Query: 2 GRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
GRGKI I++I N+T+RQVTF KRR GL+KKA ELS+LCDAEV L +FSS +LYE++N
Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 76
>sp|Q8RU31|MAD21_ORYSJ MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica
GN=MADS21 PE=2 SV=1
Length = 265
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/59 (69%), Positives = 49/59 (83%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFAN 59
MGRGKI I++I N TSRQVTF KRR GL+KKA EL+ILCDAE+ L +FSS +LYEF+N
Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSN 59
>sp|P17839|AG_ARATH Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG
PE=1 SV=2
Length = 252
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 49/59 (83%)
Query: 2 GRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
GRGKI I++I N+T+RQVTF KRR GL+KKA ELS+LCDAEV L +FSS +LYE++N
Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 76
>sp|Q38837|AGL13_ARATH Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana
GN=AGL13 PE=2 SV=2
Length = 244
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 49/59 (83%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFAN 59
MGRGK+ +++I N +RQVTFSKR+ GL+KKA ELS+LCDAEV L IFS+ KLYEF+N
Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSN 59
>sp|Q84NC2|MAD31_ORYSJ MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica
GN=MADS31 PE=2 SV=1
Length = 178
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 51/59 (86%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFAN 59
MGRG++ ++KI N T+RQVTFSKRR GL+KKA EL+ILCDA++G+ +FS T K+YE+++
Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSS 59
>sp|Q9ATE5|FBP24_PETHY MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1
Length = 268
Score = 86.3 bits (212), Expect = 5e-17, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 49/59 (83%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFAN 59
MGRGKI +++I N TSRQVTFSKRR GL+KK ELS+LCDA++GL IFSS KL+E+ +
Sbjct: 4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCS 62
>sp|Q42429|AGL8_SOLTU Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 250
Score = 85.9 bits (211), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 50/59 (84%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFAN 59
MGRG++ +++I N +RQVTFSKRR GL+KKA E+S+LCDAEVGL +FS+ KL+E+AN
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYAN 59
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
M RGK +++I N+TSRQVTFSKRR GL+KKA ELS+LCDAEV L IFS KLYEFA++
Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60
Query: 61 RL 62
+
Sbjct: 61 NM 62
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana
GN=AGL6 PE=1 SV=2
Length = 252
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 47/58 (81%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFA 58
MGRG++ +++I N +RQVTFSKRR GL+KKA ELS+LCDAEV L IFSS KLYEF
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 58
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 85.5 bits (210), Expect = 8e-17, Method: Composition-based stats.
Identities = 41/59 (69%), Positives = 50/59 (84%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFAN 59
MGRGKI I++I N+T+RQVTF KRR GL+KKA ELS+LCDAEV L +FSS +LYE+AN
Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 59
>sp|Q40703|MADS4_ORYSJ MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica
GN=MADS4 PE=1 SV=3
Length = 215
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/61 (62%), Positives = 50/61 (81%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGKI I++I NST+RQVTFSKRR G++KKA+E+ +LCDAEVG+ IFSS KL ++
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTP 60
Query: 61 R 61
+
Sbjct: 61 K 61
>sp|Q03378|GLOB_ANTMA Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1
SV=1
Length = 215
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 51/59 (86%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFAN 59
MGRGKI I++I NS++RQVT+SKRR G++KKAKE+S+LCDA V + IF+S+ K++EF +
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCS 59
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 53/66 (80%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
M RGK +++I N+TSRQVTFSKRR GL+KKA ELS+LCDAEV L IFS +KLYEF+++
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60
Query: 61 RLLCSL 66
+ ++
Sbjct: 61 SIAATI 66
>sp|P0C5B1|MAD14_ORYSI MADS-box transcription factor 14 OS=Oryza sativa subsp. indica
GN=MADS14 PE=2 SV=1
Length = 246
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 49/58 (84%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFA 58
MGRGK+ +++I N+ +RQVTFSKRR GL+KKA E+S+LCDAEV L IFS+ KLY++A
Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYA 58
>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica
GN=MADS1 PE=1 SV=1
Length = 257
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 49/60 (81%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGK+ +++I N SRQVTF+KRR GL+KKA ELS+LCDAEV L IFS +L+EF+++
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
>sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza sativa subsp. indica
GN=MADS1 PE=2 SV=2
Length = 257
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 49/60 (81%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRGK+ +++I N SRQVTF+KRR GL+KKA ELS+LCDAEV L IFS +L+EF+++
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
>sp|Q40168|AG_SOLLC Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1
PE=2 SV=1
Length = 248
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/66 (59%), Positives = 53/66 (80%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
+GRGKI I++I N+T+RQVTF KRR GL+KKA ELS+LCDAEV L +FS+ +LYE+AN
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANN 76
Query: 61 RLLCSL 66
+ ++
Sbjct: 77 SVKATI 82
>sp|Q38838|AGL14_ARATH Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana
GN=AGL14 PE=1 SV=2
Length = 221
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 49/60 (81%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
M RGK +++I N+TSRQVTFSKRR GL+KKA ELS+LCDAEV L IFS KLYEF+++
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60
>sp|O04067|AGL9_SINAL Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba
GN=AGL9 PE=2 SV=1
Length = 254
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 49/60 (81%)
Query: 1 MGRGKIVIQKINNSTSRQVTFSKRRKGLIKKAKELSILCDAEVGLAIFSSTAKLYEFANT 60
MGRG++ +++I N +RQVTF+KRR GL+KKA ELS+LCDAEV L IFS+ KLYEF ++
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,565,479
Number of Sequences: 539616
Number of extensions: 509309
Number of successful extensions: 1604
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1437
Number of HSP's gapped (non-prelim): 172
length of query: 70
length of database: 191,569,459
effective HSP length: 42
effective length of query: 28
effective length of database: 168,905,587
effective search space: 4729356436
effective search space used: 4729356436
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)