Query 037021
Match_columns 139
No_of_seqs 137 out of 1108
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 07:48:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037021.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037021hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0243 Kinesin-like protein [ 100.0 7.7E-38 1.7E-42 282.1 6.1 133 1-134 260-429 (1041)
2 KOG4280 Kinesin-like protein [ 100.0 4.8E-37 1E-41 265.9 7.3 116 1-116 205-347 (574)
3 KOG0240 Kinesin (SMY1 subfamil 100.0 1.8E-36 3.8E-41 259.5 8.0 124 1-124 203-350 (607)
4 KOG0245 Kinesin-like protein [ 100.0 2.7E-34 5.9E-39 257.5 5.5 118 1-118 210-361 (1221)
5 cd01373 KISc_KLP2_like Kinesin 100.0 1.4E-33 3E-38 232.4 8.6 110 1-110 204-336 (337)
6 cd01370 KISc_KIP3_like Kinesin 100.0 4E-33 8.8E-38 229.7 8.8 110 1-110 205-337 (338)
7 KOG0242 Kinesin-like protein [ 100.0 2.8E-33 6.1E-38 247.8 5.1 121 1-121 203-341 (675)
8 cd01368 KISc_KIF23_like Kinesi 100.0 1.9E-32 4.1E-37 226.4 8.6 107 1-107 206-343 (345)
9 cd01363 Motor_domain Myosin an 100.0 3.4E-32 7.3E-37 207.2 9.1 93 1-93 77-186 (186)
10 cd01367 KISc_KIF2_like Kinesin 100.0 2.4E-32 5.2E-37 223.7 8.2 108 1-108 199-321 (322)
11 cd01364 KISc_BimC_Eg5 Kinesin 100.0 4.7E-32 1E-36 223.9 8.3 116 2-117 214-349 (352)
12 cd01376 KISc_KID_like Kinesin 100.0 6.6E-32 1.4E-36 220.8 8.6 107 2-108 197-318 (319)
13 PLN03188 kinesin-12 family pro 100.0 3.5E-32 7.7E-37 248.3 7.2 114 1-114 298-437 (1320)
14 KOG0239 Kinesin (KAR3 subfamil 100.0 1.2E-31 2.6E-36 237.1 6.6 121 1-121 513-650 (670)
15 cd01369 KISc_KHC_KIF5 Kinesin 100.0 2.3E-31 5E-36 217.6 7.6 108 2-109 198-323 (325)
16 cd01375 KISc_KIF9_like Kinesin 100.0 3.9E-31 8.4E-36 217.5 8.6 107 2-108 207-333 (334)
17 cd01374 KISc_CENP_E Kinesin mo 100.0 5E-31 1.1E-35 215.4 8.9 108 2-109 191-319 (321)
18 cd01371 KISc_KIF3 Kinesin moto 100.0 4.6E-31 1E-35 216.9 8.5 108 2-109 203-331 (333)
19 cd01372 KISc_KIF4 Kinesin moto 100.0 6.4E-31 1.4E-35 216.0 8.2 111 1-111 200-340 (341)
20 cd01365 KISc_KIF1A_KIF1B Kines 100.0 6.5E-31 1.4E-35 217.7 8.1 113 2-114 211-352 (356)
21 cd01366 KISc_C_terminal Kinesi 100.0 1.1E-30 2.3E-35 213.9 8.3 110 2-111 200-326 (329)
22 PF00225 Kinesin: Kinesin moto 100.0 3.3E-30 7.1E-35 210.7 4.2 108 2-109 202-333 (335)
23 KOG0246 Kinesin-like protein [ 100.0 1.1E-29 2.4E-34 218.1 7.5 116 1-116 415-546 (676)
24 cd00106 KISc Kinesin motor dom 100.0 1.2E-28 2.6E-33 200.9 8.5 107 2-108 200-327 (328)
25 smart00129 KISc Kinesin motor, 100.0 2.2E-28 4.7E-33 200.3 8.8 114 2-115 198-332 (335)
26 KOG0241 Kinesin-like protein [ 99.9 2.4E-28 5.2E-33 218.4 8.3 117 2-118 215-364 (1714)
27 KOG0244 Kinesin-like protein [ 99.9 4.2E-30 9.2E-35 229.5 -3.2 117 1-117 187-329 (913)
28 KOG0247 Kinesin-like protein [ 99.9 1.7E-27 3.7E-32 208.9 6.8 105 1-105 302-430 (809)
29 COG5059 KIP1 Kinesin-like prot 99.9 3.8E-26 8.3E-31 199.6 7.8 106 2-107 208-332 (568)
30 COG5059 KIP1 Kinesin-like prot 50.4 1.4 3.1E-05 39.2 -3.5 57 2-58 500-566 (568)
31 COG5652 Predicted integral mem 29.9 38 0.00082 25.3 1.8 33 49-81 93-126 (148)
32 PF14695 LINES_C: Lines C-term 20.5 1.7E+02 0.0037 16.9 3.0 28 49-77 8-35 (39)
No 1
>KOG0243 consensus Kinesin-like protein [Cytoskeleton]
Probab=100.00 E-value=7.7e-38 Score=282.07 Aligned_cols=133 Identities=31% Similarity=0.438 Sum_probs=112.3
Q ss_pred CCCCCcceEEEEEEEEeee------CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcCCCc
Q 037021 1 MDLPRRSHKDLIVNVSHVS------DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNANESH 63 (139)
Q Consensus 1 ~~~SSRSH~if~i~v~~~~------~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~~~~ 63 (139)
+++|||||+||+|+|.... ...+.|||+||||||| |.+|+..||+||.+||+||+||.++..|
T Consensus 260 N~~SSRSHsIFsItvhike~t~~geelvK~GKLNLVDLAGSENI~RSGA~~~RArEAG~INqSLLTLGRVInALVe~s~H 339 (1041)
T KOG0243|consen 260 NDQSSRSHSIFSITVHIKENTPEGEELVKIGKLNLVDLAGSENISRSGARNGRAREAGEINQSLLTLGRVINALVEHSGH 339 (1041)
T ss_pred hhhccccceEEEEEEEEecCCCcchhhHhhcccceeeccccccccccccccchhHHhhhhhHHHHHHHHHHHHHHccCCC
Confidence 4789999999999997765 2578899999999999 8999999999999999999999999999
Q ss_pred cccCcchhhhhhhcccCCCccEEEEEEecCCCCcccee---eeh------hhccCCcccc-----------cccccchhh
Q 037021 64 VPYWESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSF------HKNQSPKSVS-----------TTKTQTESQ 123 (139)
Q Consensus 64 vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f------~~~~~~~~~~-----------~~~~~~~~~ 123 (139)
||||+|||||||||+|||..+|+|||||||+..+-+++ |.| |+|++.+|-+ .++.+++.|
T Consensus 340 IPYRESKLTRLLQDSLGGkTKT~iIATiSPa~~~lEETlSTLEYA~RAKnIkNKPevNQkl~K~~llKd~~~EIerLK~d 419 (1041)
T KOG0243|consen 340 IPYRESKLTRLLQDSLGGKTKTCIIATISPAKHNLEETLSTLEYAHRAKNIKNKPEVNQKLMKKTLLKDLYEEIERLKRD 419 (1041)
T ss_pred CCchHHHHHHHHHHHhCCCceeEEEEEeCCCcccHHHHHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999976554444 778 4555554411 255677777
Q ss_pred hhhhhhhhhcc
Q 037021 124 MHFSTKKATGV 134 (139)
Q Consensus 124 ~~~~~~~~~~~ 134 (139)
+ .+++++.||
T Consensus 420 l-~AaReKnGv 429 (1041)
T KOG0243|consen 420 L-AAAREKNGV 429 (1041)
T ss_pred H-HHhHhhCce
Confidence 7 677777765
No 2
>KOG4280 consensus Kinesin-like protein [Cytoskeleton]
Probab=100.00 E-value=4.8e-37 Score=265.93 Aligned_cols=116 Identities=33% Similarity=0.408 Sum_probs=102.5
Q ss_pred CCCCCcceEEEEEEEEeee------CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcCCC-
Q 037021 1 MDLPRRSHKDLIVNVSHVS------DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNANES- 62 (139)
Q Consensus 1 ~~~SSRSH~if~i~v~~~~------~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~~~- 62 (139)
++.|||||+||||+|++.. .....|||+||||||| +++|+.+||+||++||+||.+|.++.+
T Consensus 205 n~~SsRSH~ift~~i~~~~~~~~~~~~~~~~rlnlvDLagsEr~~~tga~G~rlkEa~~IN~SLs~LG~vI~aLvd~~~~ 284 (574)
T KOG4280|consen 205 NEESSRSHAIFTIHIESSEKSDGGLMSGRSSKLNLVDLAGSERQSKTGAEGERLKEATNINLSLSALGNVISALVDGSKT 284 (574)
T ss_pred CcccccceEEEEEEEEeecccCCCccccccceeeeeeccchhhhcccCccchhhhhhcccchhHHHHHHHHHHHhccccC
Confidence 4689999999999999932 2788999999999999 799999999999999999999999766
Q ss_pred ccccCcchhhhhhhcccCCCccEEEEEEecCCCCcccee---eeh------hhccCCcccccc
Q 037021 63 HVPYWESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSF------HKNQSPKSVSTT 116 (139)
Q Consensus 63 ~vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f------~~~~~~~~~~~~ 116 (139)
||||||||||+||||+|||||+|+|||||+|+..+..++ |+| |+|++.+|..++
T Consensus 285 HIPYRdSkLT~LLqdSLGGN~kT~mianvsp~~~~~~ETlsTLrfA~Rak~I~nk~~ined~~ 347 (574)
T KOG4280|consen 285 HIPYRDSKLTRLLQDSLGGNSKTTMIANVSPSSDNYEETLSTLRFAQRAKAIKNKPVINEDPK 347 (574)
T ss_pred CCCcchhHHHHHHHHHcCCCceEEEEEecCchhhhhHHHHHHHHHHHHHHHhhccccccCCcc
Confidence 999999999999999999999999999999977654444 888 666666666665
No 3
>KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton]
Probab=100.00 E-value=1.8e-36 Score=259.53 Aligned_cols=124 Identities=32% Similarity=0.471 Sum_probs=112.3
Q ss_pred CCCCCcceEEEEEEEEeee---CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcC-CCccc
Q 037021 1 MDLPRRSHKDLIVNVSHVS---DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNAN-ESHVP 65 (139)
Q Consensus 1 ~~~SSRSH~if~i~v~~~~---~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~-~~~vp 65 (139)
+++|||||+||+|+|.|.+ .....|+|.||||||| ...|+++||+||+|||+||+||+++ ..|||
T Consensus 203 n~~sSRSHsIF~i~VkQ~n~e~~~~~~gkLyLVDLaGSEkvsKtga~g~vleEaK~INkSLsaLgnvI~aLa~g~~ship 282 (607)
T KOG0240|consen 203 NEHSSRSHSIFLIHVKQENVEDKRKLSGKLYLVDLAGSEKVSKTGAEGAVLEEAKNINKSLSALGNVINALAEGPKSHIP 282 (607)
T ss_pred cccccccceEEEEEEEeccccchhhccccEEEEEcccccccCCCCccchhHHHHhhhhhhHHHHHHHHHHHhcCCCCCCc
Confidence 4789999999999999998 4788999999999999 5789999999999999999999997 88999
Q ss_pred cCcchhhhhhhcccCCCccEEEEEEecCCCCcccee---eeh------hhccCCcccccccccchhhh
Q 037021 66 YWESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSF------HKNQSPKSVSTTKTQTESQM 124 (139)
Q Consensus 66 yr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f------~~~~~~~~~~~~~~~~~~~~ 124 (139)
||||||||+|||+|||||+|.+|.|++|+..++.++ |.| ++|..++|.+.+...++.++
T Consensus 283 YRDSKLTRILqdSLGGNsRTtlIi~csPss~n~~ET~STl~fg~rak~ikN~v~~n~e~~~e~~~r~~ 350 (607)
T KOG0240|consen 283 YRDSKLTRILQDSLGGNSRTTLIICCSPSSLNEAETKSTLRFGNRAKTIKNTVWVNLELTAEEWKRKL 350 (607)
T ss_pred chhhHHHHHHHHHhCCCcceEEEEecCCccccccccccchhhccccccccchhhhhhHhhHHHHHHHH
Confidence 999999999999999999999999999988877777 777 67777777777777777666
No 4
>KOG0245 consensus Kinesin-like protein [Cytoskeleton]
Probab=100.00 E-value=2.7e-34 Score=257.52 Aligned_cols=118 Identities=28% Similarity=0.359 Sum_probs=106.2
Q ss_pred CCCCCcceEEEEEEEEeee-------CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcC--
Q 037021 1 MDLPRRSHKDLIVNVSHVS-------DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNAN-- 60 (139)
Q Consensus 1 ~~~SSRSH~if~i~v~~~~-------~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~-- 60 (139)
+++|||||+||||.++|.. +..+.|||+||||||| |++|+..|||||.+||.||.||++.
T Consensus 210 NdtSSRSHaVFtIvftQk~~~~~~~l~sek~SKIsLVDLAGSERasstGa~G~RLKEGa~INKSLtTLGkVISALAe~~~ 289 (1221)
T KOG0245|consen 210 NDTSSRSHAVFTIVFTQKKHDQDTGLDSEKVSKISLVDLAGSERASSTGANGDRLKEGANINKSLTTLGKVISALAESQK 289 (1221)
T ss_pred ccccccceeEEEEEEEeeeccccCCCcceeeeeeeEEeccCcccccccCCCccchhcccccchHHHHHHHHHHHHHHHhc
Confidence 5799999999999999987 3788999999999999 9999999999999999999999972
Q ss_pred -----CCccccCcchhhhhhhcccCCCccEEEEEEecCCCCcccee---eeh------hhccCCcccccccc
Q 037021 61 -----ESHVPYWESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSF------HKNQSPKSVSTTKT 118 (139)
Q Consensus 61 -----~~~vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f------~~~~~~~~~~~~~~ 118 (139)
..+||||||.||+||++.||||++|+|||.+||++.+++++ |+| |++..++|..+..+
T Consensus 290 ~k~~ks~fIPYRDSVLTWLLkEnLGGNSKTaMIAAlSPAdiNyeETLSTLRYAdRAK~Iv~~avVNEdpnaK 361 (1221)
T KOG0245|consen 290 GKKKKSDFIPYRDSVLTWLLKENLGGNSKTAMIAALSPADINYEETLSTLRYADRAKQIVNNAVVNEDPNAK 361 (1221)
T ss_pred cCCCCCccccchHHHHHHHHHHhcCCcchhhhhhccChhhcChHHHHHHHHHhhHhhhhhccceeCCCccHH
Confidence 34999999999999999999999999999999988766666 777 77888888877543
No 5
>cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup. Members of this subgroup seem to play a role in mitosis and meiosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second
Probab=100.00 E-value=1.4e-33 Score=232.40 Aligned_cols=110 Identities=29% Similarity=0.406 Sum_probs=95.3
Q ss_pred CCCCCcceEEEEEEEEeeeC-----CCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhc----C
Q 037021 1 MDLPRRSHKDLIVNVSHVSD-----VLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNA----N 60 (139)
Q Consensus 1 ~~~SSRSH~if~i~v~~~~~-----~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~----~ 60 (139)
+++|||||+||+|+|.+.+. ....|+|+||||||| +++|+..||+||++|++||.+|.+ +
T Consensus 204 n~~SSRSH~i~~i~v~~~~~~~~~~~~~~s~l~~VDLAGSEr~~~~~~~g~~~~E~~~IN~SL~~L~~vi~aL~~~~~~~ 283 (337)
T cd01373 204 NSESSRSHAVFTCTIESWEKKASSTNIRTSRLNLVDLAGSERQKDDGAEGVRLKEAKNINKSLSTLGHVIMALVDVAHGK 283 (337)
T ss_pred CCCCCCccEEEEEEEEEeecCCCCCcEEEEEEEEEECCCCCcccccCCccHhhhhhccccHHHHHHHHHHHHHHhhccCC
Confidence 36899999999999998762 245699999999999 678999999999999999999985 4
Q ss_pred CCccccCcchhhhhhhcccCCCccEEEEEEecCCCCcccee---eehhhccCC
Q 037021 61 ESHVPYWESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSFHKNQSP 110 (139)
Q Consensus 61 ~~~vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f~~~~~~ 110 (139)
..||||||||||+||+|+|||||+|+||+||+|+....+++ |+|+.+.+.
T Consensus 284 ~~~ipyR~SkLT~lL~dsLggns~t~~I~~vsP~~~~~~eTl~TL~fa~rak~ 336 (337)
T cd01373 284 QRHVPYRDSKLTFLLRDSLGGNAKTTIIANVSPSSKCFGETLSTLKFAQRAKL 336 (337)
T ss_pred CCccCCcccHHHHHHHHhcCCCceEEEEEEECCCcccHHHHHHHHHHHHHhhc
Confidence 68999999999999999999999999999999965444444 888776543
No 6
>cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup. The yeast kinesin KIP3 plays a role in positioning the mitotic spindle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a sec
Probab=100.00 E-value=4e-33 Score=229.71 Aligned_cols=110 Identities=30% Similarity=0.459 Sum_probs=96.9
Q ss_pred CCCCCcceEEEEEEEEeeeC------CCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcCC--
Q 037021 1 MDLPRRSHKDLIVNVSHVSD------VLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNANE-- 61 (139)
Q Consensus 1 ~~~SSRSH~if~i~v~~~~~------~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~~-- 61 (139)
+++|||||+||+|+|.+.+. ....|+|+||||||| +++|+..||+||.+|++||.+|++++
T Consensus 205 n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~l~~VDLAGsEr~~~~~~~g~~~~E~~~IN~SL~~L~~vi~~L~~~~~~ 284 (338)
T cd01370 205 NATSSRSHAVLQITVRQKDRTASINQQVRIGKLSLIDLAGSERASATNNRGQRLKEGANINRSLLALGNCINALVDGKKK 284 (338)
T ss_pred cCccCcceEEEEEEEEEEecCCCCCCcEEEEEEEEEECCCCccccccCCCCccccccchhhHHHHHHHHHHHHHHhccCC
Confidence 36799999999999999862 467899999999999 57899999999999999999999977
Q ss_pred -CccccCcchhhhhhhcccCCCccEEEEEEecCCCCcccee---eehhhccCC
Q 037021 62 -SHVPYWESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSFHKNQSP 110 (139)
Q Consensus 62 -~~vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f~~~~~~ 110 (139)
.||||||||||+||+|+|||||+|+||+||+|+..+.+++ |+|+.+.+.
T Consensus 285 ~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~ra~~ 337 (338)
T cd01370 285 NKHIPYRDSKLTRLLKDSLGGNCKTVMIANISPSSSHYEETHNTLKYANRAKN 337 (338)
T ss_pred CCcCCCcCCHHHHHHHHhcCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHhcc
Confidence 8999999999999999999999999999999965444444 888766543
No 7
>KOG0242 consensus Kinesin-like protein [Cytoskeleton]
Probab=99.97 E-value=2.8e-33 Score=247.81 Aligned_cols=121 Identities=26% Similarity=0.379 Sum_probs=102.6
Q ss_pred CCCCCcceEEEEEEEEeeeCCC--CCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcC--CCccc
Q 037021 1 MDLPRRSHKDLIVNVSHVSDVL--PPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNAN--ESHVP 65 (139)
Q Consensus 1 ~~~SSRSH~if~i~v~~~~~~~--~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~--~~~vp 65 (139)
++.|||||+||+|.|.+..... ..++|+||||||| +++|+.+||+||.+||+||++|+++ ..|||
T Consensus 203 N~~SSRSHaIl~i~i~s~~~~~~~~~s~L~lIDLAGSERas~T~~~G~RlkEG~~INrSLlaLgtVI~~Ls~~~~~~hip 282 (675)
T KOG0242|consen 203 NEQSSRSHAILRITVESRGREASSRVSKLNLIDLAGSERASRTGNEGVRLKEGAHINRSLLALGTVINKLSEGKRPRHIP 282 (675)
T ss_pred ccccchhhheeeEEEEeccccccchhheehhhhhhhhhhhhhhhccceeccccchhhHHHHHHHHHHHHHccccccCCCC
Confidence 4789999999999999986322 7789999999999 8999999999999999999999986 56899
Q ss_pred cCcchhhhhhhcccCCCccEEEEEEecCCCCcccee---eehhhccCCcccccccccch
Q 037021 66 YWESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSFHKNQSPKSVSTTKTQTE 121 (139)
Q Consensus 66 yr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f~~~~~~~~~~~~~~~~~ 121 (139)
||||||||+||++|||||+|+|||||+|+...+.++ |.|+.+.+.+..........
T Consensus 283 YRDSKLTRiLq~sLgGn~rt~~I~tisp~~~~~~eT~nTL~fAsrak~i~~~~~~n~~~ 341 (675)
T KOG0242|consen 283 YRDSKLTRLLQDSLGGNARTAIIATISPSSSHYEETKNTLKFASRAKEITTKAQVNVIL 341 (675)
T ss_pred ccccHHHHhchhhcCCCccEEEEEEeCchhhHHHHHHHHHHHHHHhhhcccccccceec
Confidence 999999999999999999999999999976444444 99966666555555444333
No 8
>cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup. Members of this group may play a role in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, a
Probab=99.97 E-value=1.9e-32 Score=226.38 Aligned_cols=107 Identities=23% Similarity=0.319 Sum_probs=93.8
Q ss_pred CCCCCcceEEEEEEEEeeeC-----------CCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHh
Q 037021 1 MDLPRRSHKDLIVNVSHVSD-----------VLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALN 58 (139)
Q Consensus 1 ~~~SSRSH~if~i~v~~~~~-----------~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~ 58 (139)
+++|||||+||+|+|.+.+. ....|+|+||||||| +++|+..||+||.+|++||.+|.
T Consensus 206 N~~SSRSH~i~~i~v~~~~~~~~~~~~~~~~~~~~s~l~~VDLAGsEr~~~~~~~g~~~~E~~~IN~SL~aL~~vi~aL~ 285 (345)
T cd01368 206 NRESSRSHSVFTIKLVQAPGDSDGDVDQDKDQITVSQLSLVDLAGSERTSRTQNTGERLKEAGNINTSLMTLGKCIEVLR 285 (345)
T ss_pred cCCCCCceEEEEEEEEEeccCcccccccCCCceEEEEEEEEecccccccccccccchhhhhhhhhhHHHHHHHHHHHHHH
Confidence 36899999999999998752 245689999999999 57999999999999999999999
Q ss_pred c------CCCccccCcchhhhhhhcccCCCccEEEEEEecCCCCcccee---eehhhc
Q 037021 59 A------NESHVPYWESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSFHKN 107 (139)
Q Consensus 59 ~------~~~~vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f~~~ 107 (139)
+ +..||||||||||+||+|+|||||+|+||+||+|+..+.+++ |+|+.+
T Consensus 286 ~~~~~~~~~~~iPyR~SkLT~lL~~~l~g~s~t~~I~~vsp~~~~~~eTl~tL~fa~~ 343 (345)
T cd01368 286 ENQLSGSTNKMVPYRDSKLTHLFQNYFDGEGKARMIVNVNPCASDYDETLHVMKFSAI 343 (345)
T ss_pred hhhcccCCCCcCCCcCCHHHHHHHHhcCCCCeEEEEEEeCCchhhHHHHHHHHHHHHh
Confidence 7 468999999999999999999999999999999976554444 888654
No 9
>cd01363 Motor_domain Myosin and Kinesin motor domain. These ATPases belong to the P-loop NTPase family and provide the driving force in myosin and kinesin mediated processes.
Probab=99.97 E-value=3.4e-32 Score=207.23 Aligned_cols=93 Identities=42% Similarity=0.619 Sum_probs=87.2
Q ss_pred CCCCCcceEEEEEEEEeee------CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcCCCc
Q 037021 1 MDLPRRSHKDLIVNVSHVS------DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNANESH 63 (139)
Q Consensus 1 ~~~SSRSH~if~i~v~~~~------~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~~~~ 63 (139)
++.|||||+||+|++.+.+ +....++|+||||||| +++|++.||+||.+|++||.+|.+++.|
T Consensus 77 N~~SSRsH~i~~i~v~~~~~~~~~~~~~~~s~l~lVDLAGsE~~~~~~~~~~~~~e~~~in~sl~~L~~~i~~l~~~~~~ 156 (186)
T cd01363 77 NEHSSRSHSVFRIHFGGKNALASATEQPKVGKINLVDLAGSERIDFSGAEGSRLTETANINKSLSTLGNVISALAERDSH 156 (186)
T ss_pred CCccCcccEEEEEEEEEeecCCCCccceeeeeEEEEEccccccccccCCchhhHHHHHHHhhHHHHHHHHHHHHhcCCCC
Confidence 3679999999999999886 2456789999999999 4789999999999999999999999999
Q ss_pred cccCcchhhhhhhcccCCCccEEEEEEecC
Q 037021 64 VPYWESKLTRMLQESVGCKSKILMLTCLKT 93 (139)
Q Consensus 64 vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp 93 (139)
|||||||||+||+|+|||||+|+||+||||
T Consensus 157 vpyr~SkLT~lL~~~L~g~~~t~~i~~vsP 186 (186)
T cd01363 157 VPYRESKLTRLLQDSLGGNSRTLMVACISP 186 (186)
T ss_pred CCCcccHHHHHHHHhcCCCCeEEEEEEeCc
Confidence 999999999999999999999999999998
No 10
>cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group. KIF2 is a protein expressed in neurons, which has been associated with axonal transport and neuron development; alternative splice forms have been implicated in lysosomal translocation. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found in the middle (M-type) of the protein chain. M-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second (KIF2 may be slower). To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and lo
Probab=99.97 E-value=2.4e-32 Score=223.75 Aligned_cols=108 Identities=31% Similarity=0.417 Sum_probs=97.1
Q ss_pred CCCCCcceEEEEEEEEeeeCCCCCeeEEEEeCCCC------------cccccccccccHHHHHHHHHHHhcCCCccccCc
Q 037021 1 MDLPRRSHKDLIVNVSHVSDVLPPGKMNFVDLTCS------------IFVENTEVNKSIYTLFNVVYALNANESHVPYWE 68 (139)
Q Consensus 1 ~~~SSRSH~if~i~v~~~~~~~~~s~L~lVDLAGS------------~~~E~~~in~SL~aL~~vi~aL~~~~~~vpyr~ 68 (139)
++.|||||+||+|+|.+.+.....|+|+||||||| +.+|+..||+||.+|++||.+|.+++.||||||
T Consensus 199 n~~SSRSH~i~~i~v~~~~~~~~~s~l~~vDLAGsE~~~~~~~~~~~~~~e~~~IN~SL~~L~~vi~al~~~~~~iPyRd 278 (322)
T cd01367 199 NDQSSRSHAILQIILKNKKLNKLLGKLSFIDLAGSERGADTSEHDRQTRKEGAEINKSLLALKECIRALASNKAHVPFRG 278 (322)
T ss_pred CCCcccceEEEEEEEEEecCCeeEEEEEEeecCCccccccccccchhhHHhHhHHhHHHHHHHHHHHHHhcCCCcCCCcc
Confidence 36899999999999999887778899999999999 578899999999999999999999999999999
Q ss_pred chhhhhhhcccCCCccEEEEEEecCCC--Ccccee-eehhhcc
Q 037021 69 SKLTRMLQESVGCKSKILMLTCLKTKS--SASSML-LSFHKNQ 108 (139)
Q Consensus 69 SkLT~lL~~sLgg~~~t~~I~~vsp~~--~~~~~~-L~f~~~~ 108 (139)
||||+||+|+|||||+|+||+||+|+. ..||+. |+|+.+.
T Consensus 279 SkLT~lL~~~L~g~~~t~~I~~vsp~~~~~~eTl~tL~fa~r~ 321 (322)
T cd01367 279 SKLTQVLRDSFIGNSKTVMIATISPSASSCEHTLNTLRYADRV 321 (322)
T ss_pred CHHHHHHHHhhCCCCeEEEEEEeCCchhhHHHHHHHHHHHHhh
Confidence 999999999999999999999999974 444444 8886553
No 11
>cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil d
Probab=99.97 E-value=4.7e-32 Score=223.94 Aligned_cols=116 Identities=30% Similarity=0.413 Sum_probs=100.6
Q ss_pred CCCCcceEEEEEEEEeeeC------CCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcCCCcc
Q 037021 2 DLPRRSHKDLIVNVSHVSD------VLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNANESHV 64 (139)
Q Consensus 2 ~~SSRSH~if~i~v~~~~~------~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~~~~v 64 (139)
++|||||+||+|+|.+... ....|+|+||||||+ +.+|+..||+||.+|++||.+|.+++.||
T Consensus 214 ~~sSRSH~i~~i~i~~~~~~~~~~~~~~~s~l~~VDLAGsE~~~~~~~~~~~~~e~~~iN~SL~~L~~vi~al~~~~~~v 293 (352)
T cd01364 214 DQSSRSHSIFSITIHIKETTISGEELVKIGKLNLVDLAGSENIGRSGAENKRAREAGNINQSLLTLGRVINALVEKSPHI 293 (352)
T ss_pred CCCCCCceEEEEEEEEeccCCCCCccEEEEEEEEEECCCccccccccCcchhhHHHhhhhHHHHHHHHHHHHHHcCCCCC
Confidence 5799999999999998762 235689999999999 67899999999999999999999999999
Q ss_pred ccCcchhhhhhhcccCCCccEEEEEEecCCCCcccee---eehhhccCCccccccc
Q 037021 65 PYWESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSFHKNQSPKSVSTTK 117 (139)
Q Consensus 65 pyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f~~~~~~~~~~~~~ 117 (139)
|||+|+||+||+|+|||||+|+||+||+|+....+++ |+|+.+.+.+...|..
T Consensus 294 pyR~S~LT~lL~~~Lgg~s~t~~I~~vsp~~~~~~eTl~TL~~a~~~~~i~n~P~~ 349 (352)
T cd01364 294 PYRESKLTRLLQDSLGGRTKTSIIATISPASINLEETLSTLEYAHRAKNIKNKPEV 349 (352)
T ss_pred CCcccHHHHHHHHhcCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccCcccc
Confidence 9999999999999999999999999999965444444 9997777666655543
No 12
>cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup. Members of this group might play a role in regulating chromosomal movement along microtubules in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through
Probab=99.97 E-value=6.6e-32 Score=220.75 Aligned_cols=107 Identities=36% Similarity=0.552 Sum_probs=95.8
Q ss_pred CCCCcceEEEEEEEEeee-CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcCCCccccCcc
Q 037021 2 DLPRRSHKDLIVNVSHVS-DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNANESHVPYWES 69 (139)
Q Consensus 2 ~~SSRSH~if~i~v~~~~-~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~~~~vpyr~S 69 (139)
++|||||+||+|+|.+.+ +....|+|+||||||| +++|+..||+||.+|++||.+|..+..|||||+|
T Consensus 197 ~~SSRSH~i~~i~v~~~~~~~~~~s~l~~VDLAGsE~~~~~~~~g~~~~e~~~iN~Sl~~L~~vi~aL~~~~~~ipyr~S 276 (319)
T cd01376 197 DNSSRSHAVLRIKVTQPASNIQLEGKLNLIDLAGSEDNRRTGNEGIRLKESAAINSSLFVLSKVVDALNKGLPRIPYRES 276 (319)
T ss_pred CccCCCeEEEEEEEEEECCCceEEEEEEEEECCCCCcccccCCccchhhhhhhhhhhHHHHHHHHHHHhcCCCcCCCccC
Confidence 679999999999999986 3567899999999999 5789999999999999999999999999999999
Q ss_pred hhhhhhhcccCCCccEEEEEEecCCCC--cccee-eehhhcc
Q 037021 70 KLTRMLQESVGCKSKILMLTCLKTKSS--ASSML-LSFHKNQ 108 (139)
Q Consensus 70 kLT~lL~~sLgg~~~t~~I~~vsp~~~--~~~~~-L~f~~~~ 108 (139)
+||+||+|+|||+|+|+||+||+|+.. .||+. |+|+.+.
T Consensus 277 ~LT~lL~~~L~g~s~t~~i~~vsp~~~~~~eTl~TL~fa~r~ 318 (319)
T cd01376 277 KLTRLLQDSLGGGSRCIMVANIAPERSFYQDTLSTLNFASRS 318 (319)
T ss_pred HHHHHHHHhcCCCccEEEEEEeCCchhhHHHHHHHHHHHHhh
Confidence 999999999999999999999999754 44444 8886553
No 13
>PLN03188 kinesin-12 family protein; Provisional
Probab=99.97 E-value=3.5e-32 Score=248.35 Aligned_cols=114 Identities=27% Similarity=0.409 Sum_probs=95.0
Q ss_pred CCCCCcceEEEEEEEEeee-------CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhc---
Q 037021 1 MDLPRRSHKDLIVNVSHVS-------DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNA--- 59 (139)
Q Consensus 1 ~~~SSRSH~if~i~v~~~~-------~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~--- 59 (139)
+..|||||+||+|+|++.. .....|+|+||||||| +++|+..||+||++||+||.+|+.
T Consensus 298 N~~SSRSHaIFtI~Ves~~k~~~dg~ss~r~SkLnLVDLAGSER~kkTga~G~RLkEA~~INKSLsaLGnVI~ALae~Sq 377 (1320)
T PLN03188 298 NAESSRSHSVFTCVVESRCKSVADGLSSFKTSRINLVDLAGSERQKLTGAAGDRLKEAGNINRSLSQLGNLINILAEISQ 377 (1320)
T ss_pred CCccCCCceeEEEEEEEeecccCCCCcceEEEEEEEEECCCchhccccCcccHHHHHHHHHhHHHHHHHHHHHHHHHhhc
Confidence 4689999999999998764 1235799999999999 678999999999999999999985
Q ss_pred --CCCccccCcchhhhhhhcccCCCccEEEEEEecCCCCc--ccee-eehhhccCCcccc
Q 037021 60 --NESHVPYWESKLTRMLQESVGCKSKILMLTCLKTKSSA--SSML-LSFHKNQSPKSVS 114 (139)
Q Consensus 60 --~~~~vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~--~~~~-L~f~~~~~~~~~~ 114 (139)
+..||||||||||+||||+|||||+|+||+||+|+..+ +|+. |+|+.+.+.+...
T Consensus 378 ~gk~~HIPYRDSKLTrLLQDSLGGNSKTvMIa~VSPs~~~~eETLSTLrFAsRAK~IKNk 437 (1320)
T PLN03188 378 TGKQRHIPYRDSRLTFLLQESLGGNAKLAMVCAISPSQSCKSETFSTLRFAQRAKAIKNK 437 (1320)
T ss_pred cCCCCcCCCCcchHHHHHHHhcCCCceEEEEEecCCchhhHHHHHHHHHHHHHHhhcCcc
Confidence 45799999999999999999999999999999996544 4444 8894444433333
No 14
>KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton]
Probab=99.97 E-value=1.2e-31 Score=237.08 Aligned_cols=121 Identities=31% Similarity=0.455 Sum_probs=110.4
Q ss_pred CCCCCcceEEEEEEEEeee---CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcCCCcccc
Q 037021 1 MDLPRRSHKDLIVNVSHVS---DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNANESHVPY 66 (139)
Q Consensus 1 ~~~SSRSH~if~i~v~~~~---~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~~~~vpy 66 (139)
|++|||||+||+|+|...+ +....+.|+||||||| |++|+..||+||++||+||.||+.++.||||
T Consensus 513 Ne~SSRSH~v~~v~v~g~~~~t~~~~~g~l~LVDLAGSER~~~s~~tG~RlkE~Q~INkSLS~LgdVi~AL~~k~~HiPy 592 (670)
T KOG0239|consen 513 NERSSRSHLVFRVRIRGINELTGIRVTGVLNLVDLAGSERVSKSGVTGERLKEAQNINKSLSALGDVISALASKRSHIPY 592 (670)
T ss_pred chhhhccceEEEEEEeccccCcccccccceeEeecccCcccCcCCCchhhhHHHHHhchhhhhhHHHHHHHhhcCCCCcc
Confidence 6899999999999999887 6889999999999999 8999999999999999999999999999999
Q ss_pred CcchhhhhhhcccCCCccEEEEEEecCC--CCcccee-eehhhccCCcccccccccch
Q 037021 67 WESKLTRMLQESVGCKSKILMLTCLKTK--SSASSML-LSFHKNQSPKSVSTTKTQTE 121 (139)
Q Consensus 67 r~SkLT~lL~~sLgg~~~t~~I~~vsp~--~~~~~~~-L~f~~~~~~~~~~~~~~~~~ 121 (139)
||||||+||||+|||+++|+|+++++|. +..|+++ |+|+.+.+.+.+.+..++..
T Consensus 593 RNSKLT~lLq~sLGG~sKTLmfv~isP~~~~~~Etl~sL~FA~rv~~~~lG~a~~~~~ 650 (670)
T KOG0239|consen 593 RNSKLTQLLQDSLGGDSKTLMFVNISPAAAALFETLCSLRFATRVRSVELGSARKQVS 650 (670)
T ss_pred cccchHHHhHhhhCCccceeeEEEeCccHHHHhhhhhccchHHHhhceeccccccccc
Confidence 9999999999999999999999999994 4566666 99988888888877665543
No 15
>cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup. Members of this group have been associated with organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-c
Probab=99.97 E-value=2.3e-31 Score=217.63 Aligned_cols=108 Identities=33% Similarity=0.510 Sum_probs=96.4
Q ss_pred CCCCcceEEEEEEEEeee---CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcCC-Ccccc
Q 037021 2 DLPRRSHKDLIVNVSHVS---DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNANE-SHVPY 66 (139)
Q Consensus 2 ~~SSRSH~if~i~v~~~~---~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~~-~~vpy 66 (139)
..|||||+||+|+|.+.+ +....|+|+||||||+ +++|+..||+||.+|++||.+|.+++ .||||
T Consensus 198 ~~ssRSH~i~~i~v~~~~~~~~~~~~s~l~~VDLAGsE~~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~~~~vpy 277 (325)
T cd01369 198 EESSRSHSIFLITLKQENVETGSKKRGKLFLVDLAGSEKVSKTGAEGQTLEEAKKINKSLSALGNVINALTDGKSTHIPY 277 (325)
T ss_pred CccccccEEEEEEEEEEecCCCCEEEEEEEEEECCCCCcccccCCcchhHHHHHHHhHHHHHHHHHHHHHHcCCCCcCCC
Confidence 579999999999999887 3567899999999999 46799999999999999999999987 99999
Q ss_pred CcchhhhhhhcccCCCccEEEEEEecCCCCcccee---eehhhccC
Q 037021 67 WESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSFHKNQS 109 (139)
Q Consensus 67 r~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f~~~~~ 109 (139)
|||+||+||+|+|||+|+|+||+||+|+..+.+++ |+|+.+.+
T Consensus 278 R~S~LT~lL~~~L~g~s~t~~I~~vsp~~~~~~eTl~TL~~a~r~~ 323 (325)
T cd01369 278 RDSKLTRILQDSLGGNSRTTLIICCSPSSYNESETLSTLRFGARAK 323 (325)
T ss_pred ccCHHHHHHHHhcCCCCeEEEEEEeCCccccHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999976555555 88866654
No 16
>cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80
Probab=99.97 E-value=3.9e-31 Score=217.54 Aligned_cols=107 Identities=34% Similarity=0.472 Sum_probs=95.0
Q ss_pred CCCCcceEEEEEEEEeee-----CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcCC-Ccc
Q 037021 2 DLPRRSHKDLIVNVSHVS-----DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNANE-SHV 64 (139)
Q Consensus 2 ~~SSRSH~if~i~v~~~~-----~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~~-~~v 64 (139)
.+|||||+||+|+|.+.+ .....|+|+||||||| .++|+..||+||.+|++||.+|.+++ .||
T Consensus 207 ~~sSRSH~i~~l~v~~~~~~~~~~~~~~s~l~~VDLAGsEr~~~~~~~~~~~~e~~~iN~SL~~L~~vi~~l~~~~~~~i 286 (334)
T cd01375 207 QASSRSHCIFTIHLESRSREAGSEVVRLSKLNLVDLAGSERVSKTGVSGQVLKEAKYINKSLSFLEQVINALSEKARTHV 286 (334)
T ss_pred CCcCcCeEEEEEEEEEEecCCCCCceEEEEEEEEECCCCCccccccCchhhhhhhhhhhhhHHHHHHHHHHHHhCCCCCC
Confidence 579999999999999974 3567799999999999 47899999999999999999999988 999
Q ss_pred ccCcchhhhhhhcccCCCccEEEEEEecCCCCcccee---eehhhcc
Q 037021 65 PYWESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSFHKNQ 108 (139)
Q Consensus 65 pyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f~~~~ 108 (139)
|||||+||+||+|+|||+|+|+||+||+|+..+.+++ |+|+.+.
T Consensus 287 pyRdSkLT~lL~d~Lgg~~~t~~I~~vsp~~~~~~eTl~TL~fa~r~ 333 (334)
T cd01375 287 PYRNSKLTHVLRDSLGGNCKTVMLATIWVEPSNLDETLSTLRFAQRV 333 (334)
T ss_pred CCcccHHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999965544444 8886553
No 17
>cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to
Probab=99.97 E-value=5e-31 Score=215.44 Aligned_cols=108 Identities=27% Similarity=0.412 Sum_probs=95.5
Q ss_pred CCCCcceEEEEEEEEeee------CCCCCeeEEEEeCCCC----------cccccccccccHHHHHHHHHHHhcCC--Cc
Q 037021 2 DLPRRSHKDLIVNVSHVS------DVLPPGKMNFVDLTCS----------IFVENTEVNKSIYTLFNVVYALNANE--SH 63 (139)
Q Consensus 2 ~~SSRSH~if~i~v~~~~------~~~~~s~L~lVDLAGS----------~~~E~~~in~SL~aL~~vi~aL~~~~--~~ 63 (139)
++|||||+||+|+|.+.+ +....|+|+||||||+ +++|+..||+||.+|++||.+|.+++ .|
T Consensus 191 ~~ssRSH~i~~i~v~~~~~~~~~~~~~~~s~l~~vDLAGsE~~~~~~~~~~~~e~~~iN~Sl~~L~~vi~al~~~~~~~~ 270 (321)
T cd01374 191 ERSSRSHTIFQLTIESRERGDSESGTVRVSTLNLIDLAGSERASQTGAGERRKEGSFINKSLLTLGTVISKLSEGKNSGH 270 (321)
T ss_pred CccccccEEEEEEEEEEecCCCCCCcEEEEEEEEEECCCCCccccCCCCccccccchhhhHHHHHHHHHHHHHhcCCCCc
Confidence 689999999999999987 3456799999999999 56899999999999999999999985 99
Q ss_pred cccCcchhhhhhhcccCCCccEEEEEEecCCC--Ccccee-eehhhccC
Q 037021 64 VPYWESKLTRMLQESVGCKSKILMLTCLKTKS--SASSML-LSFHKNQS 109 (139)
Q Consensus 64 vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~--~~~~~~-L~f~~~~~ 109 (139)
||||||+||+||+|+|||+|+|+||+||+|.. ..+++. |+|+.+.+
T Consensus 271 vpyR~SkLT~lL~~~L~g~s~t~~i~~vsp~~~~~~eTl~TL~~a~r~~ 319 (321)
T cd01374 271 IPYRDSKLTRILQPSLSGNARTAIICTISPASSHVEETLNTLKFASRAK 319 (321)
T ss_pred CCCcCCHHHHHHHHhcCCCceEEEEEEeCCccccHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999974 444444 88866554
No 18
>cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins. Subgroup of kinesins, which form heterotrimers composed of 2 kinesins and one non-motor accessory subunit. Kinesins II play important roles in ciliary transport, and have been implicated in neuronal transport, melanosome transport, the secretory pathway, and mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this group the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain
Probab=99.97 E-value=4.6e-31 Score=216.89 Aligned_cols=108 Identities=33% Similarity=0.481 Sum_probs=94.6
Q ss_pred CCCCcceEEEEEEEEeeeC------CCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcCCC-c
Q 037021 2 DLPRRSHKDLIVNVSHVSD------VLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNANES-H 63 (139)
Q Consensus 2 ~~SSRSH~if~i~v~~~~~------~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~~~-~ 63 (139)
++|||||+||+|+|++.+. ....|+|+||||||| +++|+..||+||.+|++||.+|.+++. |
T Consensus 203 ~~ssRSH~i~~i~v~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~iN~sL~~L~~vi~al~~~~~~~ 282 (333)
T cd01371 203 EDSSRSHSIFTITIECSEKGEDGENHIRVGKLNLVDLAGSERQSKTGATGDRLKEATKINLSLSALGNVISALVDGKSTH 282 (333)
T ss_pred CCCCCCcEEEEEEEEEEeccCCCCCcEEEEEEEEEECCCCCcccccCCchhhhHhHhhhhhHHHHHHHHHHHHHhCCCCc
Confidence 6899999999999998862 345789999999999 567999999999999999999999775 9
Q ss_pred cccCcchhhhhhhcccCCCccEEEEEEecCCCC--cccee-eehhhccC
Q 037021 64 VPYWESKLTRMLQESVGCKSKILMLTCLKTKSS--ASSML-LSFHKNQS 109 (139)
Q Consensus 64 vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~--~~~~~-L~f~~~~~ 109 (139)
||||+|+||+||+|+|||+|+|+||+|++|... .+|+. |+|+.+.+
T Consensus 283 ipyR~SkLT~lL~~~l~g~s~t~~I~~vsP~~~~~~eTl~TL~fa~r~r 331 (333)
T cd01371 283 IPYRDSKLTRLLQDSLGGNSKTVMCANIGPADYNYDETLSTLRYANRAK 331 (333)
T ss_pred CCCccCHHHHHHHHhcCCCceEEEEEEeCCccccHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999654 44444 88876654
No 19
>cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily. Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain,
Probab=99.97 E-value=6.4e-31 Score=216.05 Aligned_cols=111 Identities=32% Similarity=0.478 Sum_probs=96.6
Q ss_pred CCCCCcceEEEEEEEEeeeC-------------CCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHH
Q 037021 1 MDLPRRSHKDLIVNVSHVSD-------------VLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYA 56 (139)
Q Consensus 1 ~~~SSRSH~if~i~v~~~~~-------------~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~a 56 (139)
+++|||||+||+|+|.+.+. ....|+|+||||||+ +.+|+..||+||.+|++||.+
T Consensus 200 n~~sSRsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~s~l~~VDLAGsE~~~~~~~~~~~~~e~~~in~sl~aL~~vi~a 279 (341)
T cd01372 200 NSQSSRSHAIFTITLEQTRKNGPIAPMSGDDKNSTLTSKFHFVDLAGSERLKKTGATGDRLKEGISINSGLLALGNVISA 279 (341)
T ss_pred CCccCcCcEEEEEEEEEEecCCccccccccCCCceeeEEEEEEECCCCcccccccCchhHhHHHHHHhHHHHHHHHHHHH
Confidence 36899999999999999863 357799999999999 568999999999999999999
Q ss_pred HhcCC---CccccCcchhhhhhhcccCCCccEEEEEEecCCCCcccee---eehhhccCCc
Q 037021 57 LNANE---SHVPYWESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSFHKNQSPK 111 (139)
Q Consensus 57 L~~~~---~~vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f~~~~~~~ 111 (139)
|..++ .|||||+|+||+||+|+|||+++|+||+|++|......++ |+|+.+.+.+
T Consensus 280 l~~~~~~~~~ipyR~S~LT~lL~~~Lgg~s~t~~I~~vsp~~~~~~eTl~tL~~a~~~~~i 340 (341)
T cd01372 280 LGDESKKGSHVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNFEETLNTLKYANRARNI 340 (341)
T ss_pred HHhcCCCCCCCCCcccHHHHHHHHhcCCCceEEEEEEeCCChhhHHHHHHHHHHHHHhccC
Confidence 99876 7999999999999999999999999999999965444444 8887665543
No 20
>cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins. KIF1A (Unc104) transports synaptic vesicles to the nerve terminal, KIF1B has been implicated in transport of mitochondria. Both proteins are expressed in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. In contrast to the majority of dimeric kinesins, most KIF1A/Unc104 kinesins are monomeric motors. A lysine-rich loop in KIF1A binds to the negatively charged C-terminus of tubulin and compensates for the lack of a second motor domain, allowing KIF1A to move processively.
Probab=99.97 E-value=6.5e-31 Score=217.70 Aligned_cols=113 Identities=28% Similarity=0.392 Sum_probs=96.9
Q ss_pred CCCCcceEEEEEEEEeee-------CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcC---
Q 037021 2 DLPRRSHKDLIVNVSHVS-------DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNAN--- 60 (139)
Q Consensus 2 ~~SSRSH~if~i~v~~~~-------~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~--- 60 (139)
++|||||+||+|+|.+.. .....|+|+||||||| +++|+..||+||++|++||.+|.++
T Consensus 211 ~~SSRSH~i~~l~v~~~~~~~~~~~~~~~~s~l~~VDLAGsEr~~~~~~~~~~~~E~~~IN~SL~aL~~vi~~l~~~~~~ 290 (356)
T cd01365 211 DTSSRSHAVFTIVLTQKKLDKETDLTTEKVSKISLVDLAGSERASSTGAEGDRLKEGSNINKSLTTLGKVISALADNSSA 290 (356)
T ss_pred CCcCCceEEEEEEEEEEecccCCCCCceEEEEEEeeecccccccccccccchhhHHHHHHhHHHHHHHHHHHHHHhcccc
Confidence 579999999999999875 2467899999999999 6789999999999999999999873
Q ss_pred -----CCccccCcchhhhhhhcccCCCccEEEEEEecCCC--Ccccee-eehhhccCCcccc
Q 037021 61 -----ESHVPYWESKLTRMLQESVGCKSKILMLTCLKTKS--SASSML-LSFHKNQSPKSVS 114 (139)
Q Consensus 61 -----~~~vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~--~~~~~~-L~f~~~~~~~~~~ 114 (139)
+.||||||||||+||+|+|||+++|+||+||+|+. ..+|+. |+|+.+.+.+...
T Consensus 291 ~~~~~~~~ipyR~SkLT~lL~~~lgg~s~t~~I~~vsp~~~~~~eTl~tL~fa~~~~~i~~~ 352 (356)
T cd01365 291 KSKKKSSFIPYRDSVLTWLLKENLGGNSKTAMIATISPADINYEETLSTLRYADRAKKIVNV 352 (356)
T ss_pred cccCCCCcCCCcCcHHHHHHHHhcCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccCc
Confidence 58999999999999999999999999999999974 444444 8886665554443
No 21
>cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins. Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for mi
Probab=99.97 E-value=1.1e-30 Score=213.87 Aligned_cols=110 Identities=35% Similarity=0.465 Sum_probs=98.0
Q ss_pred CCCCcceEEEEEEEEeee---CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcCCCccccC
Q 037021 2 DLPRRSHKDLIVNVSHVS---DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNANESHVPYW 67 (139)
Q Consensus 2 ~~SSRSH~if~i~v~~~~---~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~~~~vpyr 67 (139)
++|||||+||+|+|.+.+ +....|+|+||||||+ +++|+..||+||.+|++||.+|..+..|||||
T Consensus 200 ~~sSRsH~i~~i~v~~~~~~~~~~~~s~l~~VDLaGsE~~~~~~~~~~~~~e~~~in~Sl~~L~~vl~~l~~~~~~ipyr 279 (329)
T cd01366 200 EHSSRSHAVFQLKIRGTNLQTGEQTRGKLNLVDLAGSERLKKSGATGDRLKEAQAINKSLSALGDVISALRSKDSHVPYR 279 (329)
T ss_pred CCCCCccEEEEEEEEEEcCCCCcEEEEEEEEEECCCCcccccccccchhhHhHhhhhhHHHHHHHHHHHHhcCCCcCCCc
Confidence 579999999999999886 3577899999999999 56899999999999999999999999999999
Q ss_pred cchhhhhhhcccCCCccEEEEEEecCCCCcccee---eehhhccCCc
Q 037021 68 ESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSFHKNQSPK 111 (139)
Q Consensus 68 ~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f~~~~~~~ 111 (139)
+|+||+||+|+|||+++|+||+||+|.....+++ |+|+.+...+
T Consensus 280 ~S~LT~lL~~~l~g~~~t~~i~~vsp~~~~~~etl~tL~~a~~~~~i 326 (329)
T cd01366 280 NSKLTYLLQDSLGGNSKTLMFVNISPLESNLSETLCSLRFASRVRSV 326 (329)
T ss_pred ccHhHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999965444444 8887666554
No 22
>PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport. The kinesin motor activity is directed toward the microtubule's plus end. Kinesin is an oligomeric complex composed of two heavy chains and two light chains. The maintenance of the quaternary structure does not require interchain disulphide bonds. The heavy chain is composed of three structural domains: a large globular N-terminal domain which is responsible for the motor activity of kinesin (it is known to hydrolyse ATP, to bind and move on microtubules), a central alpha-helical coiled coil domain that mediates the heavy chain dimerisation; and a small globular C-terminal domain which interacts with other proteins (such as the kinesin light chains), vesicles and membranous organelles. A number of proteins have been recently found that contain a domain similar to that of the kinesin 'motor' domain [, ]: Drosophila melanogaster claret segregational protein (ncd). Ncd is required for normal chromosomal segregation in meiosis, in females, and in early mitotic divisions of the embryo. The ncd motor activity is directed toward the microtubule's minus end. Homo sapiens CENP-E []. CENP-E is a protein that associates with kinetochores during chromosome congression, relocates to the spindle midzone at anaphase, and is quantitatively discarded at the end of the cell division. CENP-E is probably an important motor molecule in chromosome movement and/or spindle elongation. H. sapiens mitotic kinesin-like protein-1 (MKLP-1), a motor protein whose activity is directed toward the microtubule's plus end. Saccharomyces cerevisiae KAR3 protein, which is essential for nuclear fusion during mating. KAR3 may mediate microtubule sliding during nuclear fusion and possibly mitosis. S. cerevisiae CIN8 and KIP1 proteins which are required for the assembly of the mitotic spindle. Both proteins seem to interact with spindle microtubules to produce an outwardly directed force acting upon the poles. Emericella nidulans (Aspergillus nidulans) bimC, which plays an important role in nuclear division. A. nidulans klpA. Caenorhabditis elegans unc-104, which may be required for the transport of substances needed for neuronal cell differentiation. C. elegans osm-3. Xenopus laevis Eg5, which may be involved in mitosis. Arabidopsis thaliana KatA, KatB and katC. Chlamydomonas reinhardtii FLA10/KHP1 and KLP1. Both proteins seem to play a role in the rotation or twisting of the microtubules of the flagella. C. elegans hypothetical protein T09A5.2. The kinesin motor domain is located in the N-terminal part of most of the above proteins, with the exception of KAR3, klpA, and ncd where it is located in the C-terminal section. The kinesin motor domain contains about 330 amino acids. An ATP-binding motif of type A is found near position 80 to 90, the C-terminal half of the domain is involved in microtubule-binding.; GO: 0003777 microtubule motor activity, 0005524 ATP binding, 0007018 microtubule-based movement; PDB: 3NWN_A 2Y5W_A 2Y65_C 3BFN_A 2WBE_C 2ZFL_A 2ZFI_A 1I6I_A 2ZFM_A 1IA0_K ....
Probab=99.96 E-value=3.3e-30 Score=210.70 Aligned_cols=108 Identities=34% Similarity=0.531 Sum_probs=93.6
Q ss_pred CCCCcceEEEEEEEEeeeCC-------CCCeeEEEEeCCCC------------cccccccccccHHHHHHHHHHHhcC--
Q 037021 2 DLPRRSHKDLIVNVSHVSDV-------LPPGKMNFVDLTCS------------IFVENTEVNKSIYTLFNVVYALNAN-- 60 (139)
Q Consensus 2 ~~SSRSH~if~i~v~~~~~~-------~~~s~L~lVDLAGS------------~~~E~~~in~SL~aL~~vi~aL~~~-- 60 (139)
..|||||+||+|+|.+.+.. ...|+|+||||||+ +.+|+..||+||.+|++||.+|.++
T Consensus 202 ~~sSRSH~i~~i~v~~~~~~~~~~~~~~~~s~l~~vDLaGsE~~~~~~~~~~~~~~e~~~in~Sl~~L~~vi~~L~~~~~ 281 (335)
T PF00225_consen 202 ARSSRSHAIFTIHVEQKDRDPSDDEESVKHSRLTFVDLAGSERLKKSGASDGQRLKESSNINKSLSALGNVIRALAQGSK 281 (335)
T ss_dssp HHGGGSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEEEEESTGGCGCSSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred ccccccccccccccccccccccccccceeecceeeeecccccccccccccccccccccceecchhhhhhhhHhhhhcccc
Confidence 35899999999999999832 36789999999999 2568899999999999999999998
Q ss_pred CCccccCcchhhhhhhcccCCCccEEEEEEecCCCCcccee---eehhhccC
Q 037021 61 ESHVPYWESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSFHKNQS 109 (139)
Q Consensus 61 ~~~vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f~~~~~ 109 (139)
..|+|||+|+||+||+|+|||+|+|+||+||+|.....+++ |+|+.+.+
T Consensus 282 ~~~vpyr~SkLT~lL~d~l~g~s~t~~I~~vsp~~~~~~eTl~tL~fa~~~~ 333 (335)
T PF00225_consen 282 QSHVPYRDSKLTRLLKDSLGGNSKTILIVCVSPSSEDYEETLSTLRFASRAR 333 (335)
T ss_dssp TSSSCGGGSHHHHHTGGGTSSSSEEEEEEEE-SBGGGHHHHHHHHHHHHHHT
T ss_pred chhhhhhcccccceecccccccccceeEEEcCCccccHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999976444444 88866544
No 23
>KOG0246 consensus Kinesin-like protein [Cytoskeleton]
Probab=99.96 E-value=1.1e-29 Score=218.11 Aligned_cols=116 Identities=27% Similarity=0.361 Sum_probs=102.2
Q ss_pred CCCCCcceEEEEEEEEeeeCCCCCeeEEEEeCCCC------------cccccccccccHHHHHHHHHHHhcCCCccccCc
Q 037021 1 MDLPRRSHKDLIVNVSHVSDVLPPGKMNFVDLTCS------------IFVENTEVNKSIYTLFNVVYALNANESHVPYWE 68 (139)
Q Consensus 1 ~~~SSRSH~if~i~v~~~~~~~~~s~L~lVDLAGS------------~~~E~~~in~SL~aL~~vi~aL~~~~~~vpyr~ 68 (139)
+..|||||+||+|.+...-.....|+++||||||+ ...|++.|||||.||..||.||.+++.|+|||.
T Consensus 415 Ns~SSRSHAvfQIilr~~~~~k~hGKfSlIDLAGnERGaDts~adRqtRlEGAEINKSLLALKECIRaLg~nk~H~PFR~ 494 (676)
T KOG0246|consen 415 NSNSSRSHAVFQIILRKHGEFKLHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKSHLPFRG 494 (676)
T ss_pred cccccccceeEeeeeecCCcceeEeEEEEEEccCCccCCcccccchhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCchh
Confidence 46899999999999998766788999999999999 678999999999999999999999999999999
Q ss_pred chhhhhhhcccCC-CccEEEEEEecCCCCcccee---eehhhccCCcccccc
Q 037021 69 SKLTRMLQESVGC-KSKILMLTCLKTKSSASSML---LSFHKNQSPKSVSTT 116 (139)
Q Consensus 69 SkLT~lL~~sLgg-~~~t~~I~~vsp~~~~~~~~---L~f~~~~~~~~~~~~ 116 (139)
||||.+|+|+|-| |++|+||+||||.....+.+ |+|+.+.+...+...
T Consensus 495 SKLTqVLRDSFIGenSrTcMIA~ISPg~~ScEhTLNTLRYAdRVKeLsv~~~ 546 (676)
T KOG0246|consen 495 SKLTQVLRDSFIGENSRTCMIATISPGISSCEHTLNTLRYADRVKELSVDGG 546 (676)
T ss_pred hhHHHHHHHhhcCCCCceEEEEEeCCCcchhhhhHHHHHHHHHHHhhcCCCC
Confidence 9999999999998 99999999999965444444 899766665555544
No 24
>cd00106 KISc Kinesin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), in some its is found in the middle (M-type), or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors, while C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coil
Probab=99.95 E-value=1.2e-28 Score=200.94 Aligned_cols=107 Identities=36% Similarity=0.544 Sum_probs=94.8
Q ss_pred CCCCcceEEEEEEEEeeeCC-----CCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcCC--Cc
Q 037021 2 DLPRRSHKDLIVNVSHVSDV-----LPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNANE--SH 63 (139)
Q Consensus 2 ~~SSRSH~if~i~v~~~~~~-----~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~~--~~ 63 (139)
..|||||+||+|+|.+.+.. ...|+|+||||||+ +.+|+..||+||.+|++||.+|..++ .|
T Consensus 200 ~~ssRSH~i~~i~v~~~~~~~~~~~~~~s~l~~VDLaGse~~~~~~~~~~~~~e~~~in~sl~~L~~vl~~l~~~~~~~~ 279 (328)
T cd00106 200 ERSSRSHAIFTIHVEQRNTTNDGRSIKSSKLNLVDLAGSERAKKTGAEGDRLKEAKNINKSLSALGNVISALSSGQKKKH 279 (328)
T ss_pred CCcCcCcEEEEEEEEEEecCCCCccEEEEEEEEEECCCCCcccccCCchhhhHhHHhhhhhHHHHHHHHHHHHhcCCCCc
Confidence 57899999999999999842 56899999999999 45799999999999999999999988 99
Q ss_pred cccCcchhhhhhhcccCCCccEEEEEEecCCC--Ccccee-eehhhcc
Q 037021 64 VPYWESKLTRMLQESVGCKSKILMLTCLKTKS--SASSML-LSFHKNQ 108 (139)
Q Consensus 64 vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~--~~~~~~-L~f~~~~ 108 (139)
||||+|+||+||+|+|+|+++|+||+||+|.. ..++.. |+|+.+.
T Consensus 280 ip~r~SkLT~lL~~~l~g~~~t~~I~~vsp~~~~~~eTl~tL~~a~r~ 327 (328)
T cd00106 280 IPYRDSKLTRLLQDSLGGNSKTLMIANISPSSENYDETLSTLRFASRA 327 (328)
T ss_pred CCCcCcHHHHHHHHhcCCCCeEEEEEEeCCchhhHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999974 444444 8886553
No 25
>smart00129 KISc Kinesin motor, catalytic domain. ATPase. Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division.
Probab=99.95 E-value=2.2e-28 Score=200.34 Aligned_cols=114 Identities=33% Similarity=0.449 Sum_probs=97.9
Q ss_pred CCCCcceEEEEEEEEeee-----CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhc--CCCc
Q 037021 2 DLPRRSHKDLIVNVSHVS-----DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNA--NESH 63 (139)
Q Consensus 2 ~~SSRSH~if~i~v~~~~-----~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~--~~~~ 63 (139)
+.|||||+||+|+|.+.. .....|+|+||||||+ +++|+..||+||.+|++|+.+|.+ +..|
T Consensus 198 ~~ssRsH~i~~l~v~~~~~~~~~~~~~~s~l~~VDLaGse~~~~~~~~~~~~~e~~~in~sl~~L~~~l~~l~~~~~~~~ 277 (335)
T smart00129 198 EESSRSHAVFTITVESKIKNSSSGSGKASKLNLVDLAGSERASKTGAEGDRLKEAGNINKSLSALGNVINALADGQKSRH 277 (335)
T ss_pred CCCCcceEEEEEEEEEEecCCCCCCEEEEEEEEEECCCCCccccccChhHHHHhhchhhhHHHHHHHHHHHHHhcCCCCC
Confidence 679999999999999773 3678899999999999 678999999999999999999999 5779
Q ss_pred cccCcchhhhhhhcccCCCccEEEEEEecCCCCc--ccee-eehhhccCCccccc
Q 037021 64 VPYWESKLTRMLQESVGCKSKILMLTCLKTKSSA--SSML-LSFHKNQSPKSVST 115 (139)
Q Consensus 64 vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~--~~~~-L~f~~~~~~~~~~~ 115 (139)
+|||+|+||+||+++|+|+++++||+|++|.... +++. |+|+.+...+...|
T Consensus 278 ip~r~S~LT~lL~~~L~g~~~~~~i~~vsp~~~~~~eTl~tL~~a~~~~~i~~~p 332 (335)
T smart00129 278 IPYRDSKLTRLLQDSLGGNSKTLMIANISPSLSNLEETLSTLRFASRAKEIKNKA 332 (335)
T ss_pred CCCcCcHhHHHHHHHcCCCCeEEEEEEcCCCccchHHHHHHHHHHHHHhhcccCC
Confidence 9999999999999999999999999999996544 4444 88865555544433
No 26
>KOG0241 consensus Kinesin-like protein [Cytoskeleton]
Probab=99.95 E-value=2.4e-28 Score=218.36 Aligned_cols=117 Identities=26% Similarity=0.359 Sum_probs=102.1
Q ss_pred CCCCcceEEEEEEEEeee-------CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhc----
Q 037021 2 DLPRRSHKDLIVNVSHVS-------DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNA---- 59 (139)
Q Consensus 2 ~~SSRSH~if~i~v~~~~-------~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~---- 59 (139)
++|||||++|.|.|+|.- ...+.|||++|||||| +++|+.+||+||.+||.||.+|+.
T Consensus 215 ~EssrsHaVFslvvtQ~l~D~ktg~SgeKvsklslVDLAgserasktga~g~rlkegsNinkSLttLglVIsaLadq~n~ 294 (1714)
T KOG0241|consen 215 EESSRSHAVFSLVVTQTLYDLKTGHSGEKVSKLSLVDLAGSERASKTGAAGSRLKEGSNINKSLTTLGLVISALADQKNG 294 (1714)
T ss_pred ccccccceeEEEEEeeEEeccccCcchhheeeeeEEEeccccccccccchhhhhhhcCCcchhhHHHHHHHHHHHHhhcC
Confidence 569999999999999985 2678899999999999 899999999999999999999997
Q ss_pred --CCCccccCcchhhhhhhcccCCCccEEEEEEecCCC--Ccccee-eeh------hhccCCcccccccc
Q 037021 60 --NESHVPYWESKLTRMLQESVGCKSKILMLTCLKTKS--SASSML-LSF------HKNQSPKSVSTTKT 118 (139)
Q Consensus 60 --~~~~vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~--~~~~~~-L~f------~~~~~~~~~~~~~~ 118 (139)
+.++||||||.||+||+|+|||||+|+||+||||+. +.+|++ |+| |.|...+|.++..+
T Consensus 295 kgkdKfvPYrDSVLTwLLkD~LGGNsrTvMiatvSPaAdnyeeTlStLRYadrAkrIvN~avvNedpnar 364 (1714)
T KOG0241|consen 295 KGKDKFVPYRDSVLTWLLKDNLGGNSRTVMIATVSPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAR 364 (1714)
T ss_pred CCccccccchhHHHHHHHHhhcCCCceeEEEEEecccccchHHHHHHHHHHHHHHHhhccccccCCchHH
Confidence 356999999999999999999999999999999944 444444 888 77777787777443
No 27
>KOG0244 consensus Kinesin-like protein [Cytoskeleton]
Probab=99.95 E-value=4.2e-30 Score=229.46 Aligned_cols=117 Identities=30% Similarity=0.426 Sum_probs=102.7
Q ss_pred CCCCCcceEEEEEEEEeee----CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcCCC--c
Q 037021 1 MDLPRRSHKDLIVNVSHVS----DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNANES--H 63 (139)
Q Consensus 1 ~~~SSRSH~if~i~v~~~~----~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~~~--~ 63 (139)
+..|||||+|||+.+++.. ....++||+||||||| +++|+.+||.+|++||+||.||...+. |
T Consensus 187 N~qssRshAifti~lkq~kk~~~~s~~~sKlhlVDLAGSER~kkT~a~gdrlKEgInIN~gLL~LgnVIsaLg~~kk~~~ 266 (913)
T KOG0244|consen 187 NAQSSRSHAIFTITLKQRKKLSKRSSFCSKLHLVDLAGSERVKKTKAEGDRLKEGININGGLLALGNVISALGEAKKGGE 266 (913)
T ss_pred chhhhhhhHHHHHHHHHHHHhhccchhhhhhheeeccccccccccccchhhhhhccCcchHHHHHHHHHHHHHhhhcCCc
Confidence 3579999999999999865 3566799999999999 999999999999999999999998665 9
Q ss_pred cccCcchhhhhhhcccCCCccEEEEEEecCCCCcccee---eeh------hhccCCccccccc
Q 037021 64 VPYWESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSF------HKNQSPKSVSTTK 117 (139)
Q Consensus 64 vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f------~~~~~~~~~~~~~ 117 (139)
||||+|+|||||||+||||+.|+||+||||++.+-.++ |.| ++|++.+|..+..
T Consensus 267 vpyRdSkltrlLQdslgGns~tlmiaCiSpadsn~~EtlnTl~ya~Rak~iknk~vvN~d~~~ 329 (913)
T KOG0244|consen 267 VPYRDSKLTRLLQDSLGGNSDTLMIACISPADSNAQETLNTLRYADRAKQIKNKPVVNQDPKS 329 (913)
T ss_pred ccchHHHHHHHHHHHhcCCcceeeeeecChhhhhhhhHHHHHHHhhHHHHhcccccccccHHH
Confidence 99999999999999999999999999999988655555 555 8888888875533
No 28
>KOG0247 consensus Kinesin-like protein [Cytoskeleton]
Probab=99.94 E-value=1.7e-27 Score=208.86 Aligned_cols=105 Identities=28% Similarity=0.423 Sum_probs=94.0
Q ss_pred CCCCCcceEEEEEEEEeee-----CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhcC----
Q 037021 1 MDLPRRSHKDLIVNVSHVS-----DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNAN---- 60 (139)
Q Consensus 1 ~~~SSRSH~if~i~v~~~~-----~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~~---- 60 (139)
+..|||||+||+|.|-+.+ .....|.|.||||||| |++|+.+||.||++||+||++|.++
T Consensus 302 N~~SSRSHsVFtIkl~q~~~~~~s~~i~vSqlsLvDLAGSERt~rtq~sG~RLrEagNINtSLmTLg~Cie~LR~nqk~k 381 (809)
T KOG0247|consen 302 NANSSRSHSVFTIKLVQAPRSQDSNQITVSQLSLVDLAGSERTNRTQNSGERLREAGNINTSLMTLRRCIDVLRENQKSK 381 (809)
T ss_pred cccccccceeEEEEeeecccccccCceeEEeeeeeecccchhcccccchhHHHHhhccccHHHHHHHHHHHHHHHHhhhh
Confidence 3579999999999998887 3688999999999999 8999999999999999999999973
Q ss_pred -CCccccCcchhhhhhhcccCCCccEEEEEEecCCCCcccee---eehh
Q 037021 61 -ESHVPYWESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSFH 105 (139)
Q Consensus 61 -~~~vpyr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f~ 105 (139)
+.+|||||||||++++.+|.|+.+.+||+||+|.+..+.+. +.|+
T Consensus 382 s~~~VPyRdSKLThlfq~~f~G~gki~MIV~vnp~~e~YdEnl~vlkFa 430 (809)
T KOG0247|consen 382 SQKIVPYRDSKLTHLFKNYFDGKGKIRMIVCVNPKAEDYDENLNVLKFA 430 (809)
T ss_pred ccccCcchHHHHHHHHHHhcCCCCcEEEEEecCCchhhHHHHHHHHHHH
Confidence 47999999999999999999999999999999965444444 8883
No 29
>COG5059 KIP1 Kinesin-like protein [Cytoskeleton]
Probab=99.93 E-value=3.8e-26 Score=199.55 Aligned_cols=106 Identities=33% Similarity=0.477 Sum_probs=94.3
Q ss_pred CCCCcceEEEEEEEEeee---CCCCCeeEEEEeCCCC-----------cccccccccccHHHHHHHHHHHhc--CCCccc
Q 037021 2 DLPRRSHKDLIVNVSHVS---DVLPPGKMNFVDLTCS-----------IFVENTEVNKSIYTLFNVVYALNA--NESHVP 65 (139)
Q Consensus 2 ~~SSRSH~if~i~v~~~~---~~~~~s~L~lVDLAGS-----------~~~E~~~in~SL~aL~~vi~aL~~--~~~~vp 65 (139)
+.|||||++|++++.+.+ +....++|++|||||| ++.|+..||+||.+||+||++|.. +..|||
T Consensus 208 ~~ssRshsi~~i~~~~~~~~~~~~~~~~l~lvDLagSE~~~~~~~~~~r~~E~~~iN~sLl~Lg~vI~~L~~~~~~~~ip 287 (568)
T COG5059 208 DESSRSHSIFQIELASKNKVSGTSETSKLSLVDLAGSERAARTGNRGTRLKEGASINKSLLTLGNVINALGDKKKSGHIP 287 (568)
T ss_pred cccccceEEEEEEEEEeccCccceecceEEEEeeccccccchhhcccchhhhhhhhHhhHHHHHHHHHHHhccccCCccc
Confidence 479999999999999997 3444479999999999 789999999999999999999998 788999
Q ss_pred cCcchhhhhhhcccCCCccEEEEEEecCCCCcccee---eehhhc
Q 037021 66 YWESKLTRMLQESVGCKSKILMLTCLKTKSSASSML---LSFHKN 107 (139)
Q Consensus 66 yr~SkLT~lL~~sLgg~~~t~~I~~vsp~~~~~~~~---L~f~~~ 107 (139)
||+|+|||+|+++|||+|+|++||||+|+....+++ |.|+-+
T Consensus 288 yReskLTRlLq~sLgG~~~~~~i~~Isp~~~~~~et~~tL~~a~r 332 (568)
T COG5059 288 YRESKLTRLLQDSLGGNCNTRVICTISPSSNSFEETINTLKFASR 332 (568)
T ss_pred hhhhHHHHHHHHhcCCCccEEEEEEEcCCCCchHHHHHHHHHHHH
Confidence 999999999999999999999999999977555555 888333
No 30
>COG5059 KIP1 Kinesin-like protein [Cytoskeleton]
Probab=50.40 E-value=1.4 Score=39.24 Aligned_cols=57 Identities=28% Similarity=0.287 Sum_probs=42.7
Q ss_pred CCCCcceEEEEEEEEeeeCCCCCeeEEEEeCCCC----------cccccccccccHHHHHHHHHHHh
Q 037021 2 DLPRRSHKDLIVNVSHVSDVLPPGKMNFVDLTCS----------IFVENTEVNKSIYTLFNVVYALN 58 (139)
Q Consensus 2 ~~SSRSH~if~i~v~~~~~~~~~s~L~lVDLAGS----------~~~E~~~in~SL~aL~~vi~aL~ 58 (139)
.+++|+|.+|..+..........-.++.|||||+ ++++...+|++|..++.++.++.
T Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~e~~~s~~~~~~l~~~~~~~k~l~~~~d~~~~~~ 566 (568)
T COG5059 500 LRSSRSHSKFRDHLNGSNSSTKELSLNQVDLAGSERKVSQSVGELLRETQSLNKSLSSLGDVIHALG 566 (568)
T ss_pred hhhcccchhhhhcccchhhhhHHHHhhhhhccccccchhhhhHHHHHhhHhhhhccccchhhhhhcc
Confidence 3678999999888877653211112899999996 67888899999998888887653
No 31
>COG5652 Predicted integral membrane protein [Function unknown]
Probab=29.87 E-value=38 Score=25.30 Aligned_cols=33 Identities=12% Similarity=0.300 Sum_probs=25.7
Q ss_pred HHHHHHHHHhc-CCCccccCcchhhhhhhcccCC
Q 037021 49 TLFNVVYALNA-NESHVPYWESKLTRMLQESVGC 81 (139)
Q Consensus 49 aL~~vi~aL~~-~~~~vpyr~SkLT~lL~~sLgg 81 (139)
.++.+...|.+ .|.++|+|.+.+--++-|.+|-
T Consensus 93 ~i~~~~~~ldE~~Q~f~PGR~~sl~Dvi~d~iGA 126 (148)
T COG5652 93 FIGTLYGILDEVHQTFLPGRAASLVDVIADTIGA 126 (148)
T ss_pred HHHHHHHHHHHHHHhhcCCcchHHHHHHHHHhhh
Confidence 34445555555 5889999999999999999885
No 32
>PF14695 LINES_C: Lines C-terminus
Probab=20.54 E-value=1.7e+02 Score=16.90 Aligned_cols=28 Identities=29% Similarity=0.352 Sum_probs=19.2
Q ss_pred HHHHHHHHHhcCCCccccCcchhhhhhhc
Q 037021 49 TLFNVVYALNANESHVPYWESKLTRMLQE 77 (139)
Q Consensus 49 aL~~vi~aL~~~~~~vpyr~SkLT~lL~~ 77 (139)
.|..-|+.|.. ..-.||.-++|.++|..
T Consensus 8 ~L~~aI~rL~~-k~LFPYN~~pLLrlL~~ 35 (39)
T PF14695_consen 8 RLRLAIERLVR-KNLFPYNPSPLLRLLEQ 35 (39)
T ss_pred HHHHHHHHHHH-CCCCCCChHHHHHHHHH
Confidence 34444555543 45679999999999864
Done!