Query 037024
Match_columns 238
No_of_seqs 300 out of 1867
Neff 7.2
Searched_HMMs 13730
Date Mon Mar 25 13:00:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037024.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037024hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1igna1 a.4.1.6 (A:360-445) DN 99.8 1.1E-21 7.7E-26 141.9 -3.8 72 14-86 1-76 (86)
2 d1igna1 a.4.1.6 (A:360-445) DN 99.8 3.7E-20 2.7E-24 133.7 2.5 71 68-138 1-77 (86)
3 d1gvda_ a.4.1.3 (A:) c-Myb, DN 99.8 9E-20 6.5E-24 119.7 3.8 52 12-65 1-52 (52)
4 d1gvda_ a.4.1.3 (A:) c-Myb, DN 99.7 7.4E-19 5.4E-23 115.2 6.0 51 66-116 1-52 (52)
5 d1gv2a2 a.4.1.3 (A:144-190) c- 99.7 1.5E-18 1.1E-22 111.4 6.0 47 68-114 1-47 (47)
6 d1guua_ a.4.1.3 (A:) c-Myb, DN 99.7 8.7E-19 6.3E-23 114.0 2.6 50 14-65 1-50 (50)
7 d1guua_ a.4.1.3 (A:) c-Myb, DN 99.7 1.4E-17 1.1E-21 108.1 5.6 49 68-116 1-50 (50)
8 d2ckxa1 a.4.1.3 (A:578-660) Te 99.6 3.4E-17 2.5E-21 117.3 2.2 74 15-92 1-82 (83)
9 d1w0ua_ a.4.1.4 (A:) Telomeric 99.6 1.4E-16 1E-20 105.3 2.0 54 13-67 1-55 (55)
10 d1w0ua_ a.4.1.4 (A:) Telomeric 99.6 7.6E-16 5.5E-20 101.8 5.3 51 67-117 1-54 (55)
11 d1w0ta_ a.4.1.4 (A:) DNA-bindi 99.6 1.9E-15 1.4E-19 98.7 5.4 48 67-114 1-51 (52)
12 d1gv2a2 a.4.1.3 (A:144-190) c- 99.5 6.8E-16 5E-20 98.7 2.8 47 14-63 1-47 (47)
13 d2cu7a1 a.4.1.3 (A:8-72) MYSM1 99.5 2.9E-15 2.1E-19 102.1 4.2 57 68-124 2-58 (65)
14 d1w0ta_ a.4.1.4 (A:) DNA-bindi 99.5 1.7E-15 1.3E-19 98.9 2.3 49 13-62 1-50 (52)
15 d2ckxa1 a.4.1.3 (A:578-660) Te 99.5 1E-14 7.5E-19 104.1 6.6 57 70-126 2-68 (83)
16 d1x41a1 a.4.1.1 (A:8-54) Trans 99.5 1.8E-15 1.3E-19 96.7 1.4 44 16-61 3-46 (47)
17 d1x41a1 a.4.1.1 (A:8-54) Trans 99.5 7.6E-15 5.5E-19 93.8 4.4 43 70-112 3-46 (47)
18 d2cqra1 a.4.1.3 (A:7-66) DnaJ 99.5 4.9E-14 3.6E-18 94.5 6.6 50 63-112 7-60 (60)
19 d2cqra1 a.4.1.3 (A:7-66) DnaJ 99.4 3.8E-14 2.8E-18 95.1 3.6 52 8-60 6-59 (60)
20 d2cu7a1 a.4.1.3 (A:8-72) MYSM1 99.4 2E-14 1.4E-18 97.9 -0.5 58 15-75 3-60 (65)
21 d1ug2a_ a.4.1.3 (A:) 2610100b2 99.4 3.3E-13 2.4E-17 97.4 5.9 68 48-115 13-83 (95)
22 d2cjja1 a.4.1.3 (A:8-70) Radia 99.3 3.4E-13 2.5E-17 91.2 5.0 46 69-114 2-51 (63)
23 d2cjja1 a.4.1.3 (A:8-70) Radia 99.3 5.4E-13 4E-17 90.1 1.6 45 15-60 2-48 (63)
24 d2iw5b1 a.4.1.3 (B:376-440) RE 99.2 3E-12 2.2E-16 86.9 4.5 47 68-114 5-51 (65)
25 d1xc5a1 a.4.1.3 (A:413-480) Nu 99.2 4.6E-12 3.3E-16 86.7 5.0 48 67-114 16-63 (68)
26 d2iw5b1 a.4.1.3 (B:376-440) RE 99.0 4E-11 2.9E-15 81.2 2.1 46 14-62 5-50 (65)
27 d1xc5a1 a.4.1.3 (A:413-480) Nu 99.0 3.8E-11 2.7E-15 82.0 1.8 50 9-61 12-61 (68)
28 d1ug2a_ a.4.1.3 (A:) 2610100b2 98.9 1.3E-10 9.5E-15 83.5 2.0 53 9-62 28-81 (95)
29 d2cqqa1 a.4.1.3 (A:8-66) DnaJ 98.3 2.9E-07 2.1E-11 60.4 4.0 45 69-114 2-50 (59)
30 d2crga1 a.4.1.3 (A:8-64) Metas 98.2 9.8E-07 7.1E-11 57.5 5.5 44 69-112 2-46 (57)
31 d2cqqa1 a.4.1.3 (A:8-66) DnaJ 98.1 2.4E-07 1.8E-11 60.8 0.8 45 15-61 2-48 (59)
32 d2crga1 a.4.1.3 (A:8-64) Metas 97.9 1.9E-06 1.4E-10 56.0 2.4 43 16-60 3-45 (57)
33 d1fexa_ a.4.1.3 (A:) Rap1 {Hum 97.7 2.8E-05 2.1E-09 50.6 5.3 47 68-114 2-58 (59)
34 d1x58a1 a.4.1.1 (A:8-56) Hypot 97.3 0.00024 1.7E-08 42.9 5.2 44 69-112 2-48 (49)
35 d1fexa_ a.4.1.3 (A:) Rap1 {Hum 97.0 0.0001 7.6E-09 47.8 1.6 49 14-63 2-58 (59)
36 d1irza_ a.4.1.11 (A:) Arr10-B 96.8 0.0009 6.5E-08 43.9 5.0 46 68-113 7-57 (64)
37 d1wgxa_ a.4.1.3 (A:) Hypotheti 96.4 0.0011 8.1E-08 43.7 3.4 52 12-64 6-59 (73)
38 d1wgxa_ a.4.1.3 (A:) Hypotheti 96.1 0.0076 5.5E-07 39.5 6.3 50 67-116 7-60 (73)
39 d1irza_ a.4.1.11 (A:) Arr10-B 95.4 0.0055 4E-07 40.0 3.3 48 13-61 6-56 (64)
40 d1x58a1 a.4.1.1 (A:8-56) Hypot 95.2 0.0041 3E-07 37.3 1.8 45 14-60 1-47 (49)
41 d1ofcx2 a.4.1.13 (X:851-978) S 91.8 0.12 8.9E-06 37.8 5.2 52 65-116 46-113 (128)
42 d1ofcx1 a.4.1.3 (X:799-850) SA 90.3 0.35 2.5E-05 29.7 5.5 41 70-110 1-42 (52)
43 d1ofcx1 a.4.1.3 (X:799-850) SA 83.7 0.47 3.5E-05 29.0 3.2 38 16-55 1-38 (52)
44 d1ofcx2 a.4.1.13 (X:851-978) S 79.7 0.63 4.6E-05 33.8 3.2 48 11-59 46-107 (128)
45 d1kkxa_ a.4.3.1 (A:) Transcrip 68.8 1.3 9.1E-05 30.6 2.3 39 78-116 38-84 (102)
46 d2cg4a1 a.4.5.32 (A:4-66) Regu 62.6 2.4 0.00017 26.3 2.6 44 74-118 5-49 (63)
47 d2cyya1 a.4.5.32 (A:5-64) Puta 61.4 3.8 0.00027 25.0 3.4 45 74-119 3-48 (60)
48 d2cfxa1 a.4.5.32 (A:1-63) Tran 58.1 3.2 0.00023 25.7 2.6 45 74-119 5-50 (63)
49 d1c20a_ a.4.3.1 (A:) DNA-bindi 55.1 5.3 0.00039 28.3 3.7 40 77-116 55-107 (128)
50 d1rp3a2 a.4.13.2 (A:164-234) S 51.9 7.8 0.00057 23.7 3.8 41 74-115 24-64 (71)
51 d1i1ga1 a.4.5.32 (A:2-61) LprA 49.8 7.5 0.00055 23.5 3.3 45 74-119 3-48 (60)
52 d1ryua_ a.4.3.1 (A:) SWI-SNF c 49.6 5.3 0.00039 28.0 2.9 40 77-116 53-104 (120)
53 d2bgxa1 a.20.1.1 (A:180-260) P 42.5 17 0.0013 23.5 4.4 68 69-139 14-81 (81)
54 d2bgxa1 a.20.1.1 (A:180-260) P 38.8 9.5 0.00069 24.9 2.6 66 16-87 15-80 (81)
55 d1ig6a_ a.4.3.1 (A:) MRF-2 DNA 37.2 6.7 0.00048 26.8 1.7 40 77-116 36-88 (107)
56 d1or7a1 a.4.13.2 (A:120-187) S 36.8 19 0.0014 21.7 3.9 40 74-114 21-60 (68)
57 d1nexa1 a.157.1.1 (A:116-185) 34.0 8.2 0.0006 24.4 1.6 33 91-130 37-69 (70)
58 d1dwka1 a.35.1.4 (A:1-86) Cyan 26.0 27 0.002 22.8 3.2 30 77-107 16-45 (86)
59 d1igna2 a.4.1.6 (A:446-594) DN 25.2 24 0.0018 25.4 3.0 26 90-115 81-106 (149)
60 d1vz0a1 a.4.14.1 (A:116-208) P 24.4 75 0.0054 20.6 5.4 54 73-128 5-64 (93)
No 1
>d1igna1 a.4.1.6 (A:360-445) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.78 E-value=1.1e-21 Score=141.85 Aligned_cols=72 Identities=14% Similarity=0.173 Sum_probs=64.9
Q ss_pred CCCCCHHHHHHHHHHHHHhCCC----CCceecccccCCCCCcchhhhhhccccCCCCCCCCCCHHHHHHHHHHHHhh
Q 037024 14 RGPWSAEEDSILKNYLEQFGNG----GNWIALPKKAGLNRCGKSCRLRWLNYLRPDIKHGGFTKEEDTIICNLYCTM 86 (238)
Q Consensus 14 kg~WT~eED~~L~~~v~~~g~~----~~W~~Ia~~~~~~Rt~~qcr~Rw~~~L~p~i~k~~WT~eED~~L~~~v~~~ 86 (238)
|++||+|||++|+++|.+||.. .+|..||+.|+ |||++||+.||.++|+|.+++++||.+||.+|+.....+
T Consensus 1 k~~WT~eED~~L~~~v~~~g~~~~~~~~W~~IA~~lp-gRt~~qcr~Rw~~~L~p~l~~~~~t~~ed~ll~d~~~~l 76 (86)
T d1igna1 1 KASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVP-NHTGNSIRHRFRVYLSKRLEYVYEVDKFGKLVRDDDGNL 76 (86)
T ss_dssp CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTST-TSCHHHHHHHHHHTTGGGCCCEECBCTTSCBCBCTTSCB
T ss_pred CCCCCHHHHHHHHHHHHHhCcCcCCccCHHHHHHHcC-CCCHHHHHHHHHHHcCccccCCCCCCchhHHHHHHhhcc
Confidence 6899999999999999999862 24999999998 999999999999999999999999999999887655443
No 2
>d1igna1 a.4.1.6 (A:360-445) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.77 E-value=3.7e-20 Score=133.68 Aligned_cols=71 Identities=21% Similarity=0.237 Sum_probs=65.7
Q ss_pred CCCCCHHHHHHHHHHHHhhCCc------hhhhcccCCCCCHHHHHHHHHHhhchhhhcCCCChHHhHHHHhhhHHhC
Q 037024 68 HGGFTKEEDTIICNLYCTMGSR------WSVIASQLPGRTDNDVKNYWNTKLKKNVLAGKLSDNTQVSVSTIPEEFG 138 (238)
Q Consensus 68 k~~WT~eED~~L~~~v~~~G~~------W~~Ia~~l~gRt~~~cr~Rw~~~l~~~~~~~~~t~~ed~~l~~~~~~~g 138 (238)
|++||+|||++|+++|.+||.+ |..||..|||||++|||+||+++|.|.++++.||++|+.+|+..+..+.
T Consensus 1 k~~WT~eED~~L~~~v~~~g~~~~~~~~W~~IA~~lpgRt~~qcr~Rw~~~L~p~l~~~~~t~~ed~ll~d~~~~li 77 (86)
T d1igna1 1 KASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYLSKRLEYVYEVDKFGKLVRDDDGNLI 77 (86)
T ss_dssp CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTSTTSCHHHHHHHHHHTTGGGCCCEECBCTTSCBCBCTTSCBC
T ss_pred CCCCCHHHHHHHHHHHHHhCcCcCCccCHHHHHHHcCCCCHHHHHHHHHHHcCccccCCCCCCchhHHHHHHhhccc
Confidence 5799999999999999999964 9999999999999999999999999999999999999998888765543
No 3
>d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=9e-20 Score=119.67 Aligned_cols=52 Identities=38% Similarity=0.878 Sum_probs=49.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCCceecccccCCCCCcchhhhhhccccCCC
Q 037024 12 VKRGPWSAEEDSILKNYLEQFGNGGNWIALPKKAGLNRCGKSCRLRWLNYLRPD 65 (238)
Q Consensus 12 ~~kg~WT~eED~~L~~~v~~~g~~~~W~~Ia~~~~~~Rt~~qcr~Rw~~~L~p~ 65 (238)
++||+||+|||++|+++|.+||. ++|..||+.|+ +||+.||++||.++|+|.
T Consensus 1 l~rg~WT~eED~~L~~~v~~~g~-~~W~~Ia~~l~-~Rt~~qc~~Rw~~~L~P~ 52 (52)
T d1gvda_ 1 LIKGPWTKEEDQRLIKLVQKYGP-KRWSVIAKHLK-GRIGKQCRERWHNHLNPE 52 (52)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCT-TCHHHHHTTST-TCCHHHHHHHHHHTTSCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHCC-CCHHHHHHHHC-CCCHHHHHHHHHhhCCCC
Confidence 57999999999999999999997 69999999998 999999999999999984
No 4
>d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=7.4e-19 Score=115.23 Aligned_cols=51 Identities=37% Similarity=0.694 Sum_probs=48.3
Q ss_pred CCCCCCCHHHHHHHHHHHHhhC-CchhhhcccCCCCCHHHHHHHHHHhhchh
Q 037024 66 IKHGGFTKEEDTIICNLYCTMG-SRWSVIASQLPGRTDNDVKNYWNTKLKKN 116 (238)
Q Consensus 66 i~k~~WT~eED~~L~~~v~~~G-~~W~~Ia~~l~gRt~~~cr~Rw~~~l~~~ 116 (238)
+.||+||++||++|+++|.+|| .+|..||+.|||||+.||++||+++|+|.
T Consensus 1 l~rg~WT~eED~~L~~~v~~~g~~~W~~Ia~~l~~Rt~~qc~~Rw~~~L~P~ 52 (52)
T d1gvda_ 1 LIKGPWTKEEDQRLIKLVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPE 52 (52)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCTTCHHHHHTTSTTCCHHHHHHHHHHTTSCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHhhCCCC
Confidence 5789999999999999999999 68999999999999999999999999873
No 5
>d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=1.5e-18 Score=111.39 Aligned_cols=47 Identities=47% Similarity=0.855 Sum_probs=45.2
Q ss_pred CCCCCHHHHHHHHHHHHhhCCchhhhcccCCCCCHHHHHHHHHHhhc
Q 037024 68 HGGFTKEEDTIICNLYCTMGSRWSVIASQLPGRTDNDVKNYWNTKLK 114 (238)
Q Consensus 68 k~~WT~eED~~L~~~v~~~G~~W~~Ia~~l~gRt~~~cr~Rw~~~l~ 114 (238)
|++||+|||++|+++|.+||++|+.||++|||||+++||+||+++++
T Consensus 1 K~~WT~eED~~L~~~v~~~G~~W~~Ia~~~~gRt~~~~knr~~~~lr 47 (47)
T d1gv2a2 1 KTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMR 47 (47)
T ss_dssp CCCCCHHHHHHHHHHHHHHSSCHHHHHTTCTTCCHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHHhhHHHHHHhHcCCCCHHHHHHHHHHHcC
Confidence 57999999999999999999999999999999999999999999875
No 6
>d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=8.7e-19 Score=114.02 Aligned_cols=50 Identities=34% Similarity=0.725 Sum_probs=47.6
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCCCceecccccCCCCCcchhhhhhccccCCC
Q 037024 14 RGPWSAEEDSILKNYLEQFGNGGNWIALPKKAGLNRCGKSCRLRWLNYLRPD 65 (238)
Q Consensus 14 kg~WT~eED~~L~~~v~~~g~~~~W~~Ia~~~~~~Rt~~qcr~Rw~~~L~p~ 65 (238)
|++||+|||++|+++|.+||. ++|..||..|+ +||+.||++||.++|+|.
T Consensus 1 k~~WT~eED~~L~~~v~~~g~-~~W~~Ia~~~~-~Rt~~qcr~Rw~~~L~P~ 50 (50)
T d1guua_ 1 KTRWTREEDEKLKKLVEQNGT-DDWKVIANYLP-NRTDVQCQHRWQKVLNPE 50 (50)
T ss_dssp CCCCCHHHHHHHHHHHHHHCS-SCHHHHHHTST-TCCHHHHHHHHHHHHSCC
T ss_pred CCCCCHHHHHHHHHHHHHHCC-CCHHHHHHHHC-CCCHHHHHHHHHhhCCCC
Confidence 678999999999999999998 69999999998 999999999999999984
No 7
>d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.68 E-value=1.4e-17 Score=108.12 Aligned_cols=49 Identities=35% Similarity=0.596 Sum_probs=46.4
Q ss_pred CCCCCHHHHHHHHHHHHhhC-CchhhhcccCCCCCHHHHHHHHHHhhchh
Q 037024 68 HGGFTKEEDTIICNLYCTMG-SRWSVIASQLPGRTDNDVKNYWNTKLKKN 116 (238)
Q Consensus 68 k~~WT~eED~~L~~~v~~~G-~~W~~Ia~~l~gRt~~~cr~Rw~~~l~~~ 116 (238)
|++||++||++|+++|.+|| ++|..||..|||||+.||++||+++|.|.
T Consensus 1 k~~WT~eED~~L~~~v~~~g~~~W~~Ia~~~~~Rt~~qcr~Rw~~~L~P~ 50 (50)
T d1guua_ 1 KTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPE 50 (50)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTSTTCCHHHHHHHHHHHHSCC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHhhCCCC
Confidence 57899999999999999999 68999999999999999999999999873
No 8
>d2ckxa1 a.4.1.3 (A:578-660) Telomere binding protein TBP1 {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=99.62 E-value=3.4e-17 Score=117.29 Aligned_cols=74 Identities=20% Similarity=0.407 Sum_probs=60.5
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCCceeccccc---CCCCCcchhhhhhcccc-----CCCCCCCCCCHHHHHHHHHHHHhh
Q 037024 15 GPWSAEEDSILKNYLEQFGNGGNWIALPKKA---GLNRCGKSCRLRWLNYL-----RPDIKHGGFTKEEDTIICNLYCTM 86 (238)
Q Consensus 15 g~WT~eED~~L~~~v~~~g~~~~W~~Ia~~~---~~~Rt~~qcr~Rw~~~L-----~p~i~k~~WT~eED~~L~~~v~~~ 86 (238)
.+||+|||++|+.+|.+||. ++|..|++.+ .++||+.||++||.++| .|..+++.|+++| |+..|..+
T Consensus 1 r~WT~eEd~~L~~~V~~~G~-~~W~~I~~~~~~~~~~Rt~~qck~RWrn~l~~~~~~~~~~~~~~~p~e---ll~~v~~~ 76 (83)
T d2ckxa1 1 RPFSVAEVEALVEAVEHLGT-GRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQRRGEPVPQD---LLDRVLAA 76 (83)
T ss_dssp CCCCHHHHHHHHHHHHHHCS-SCHHHHHHHHCTTCTTSCHHHHHHHHHHHHHHHHSCGGGCCSSCCCHH---HHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCc-ccHHHHHHHHHhhccCCCHHHHHHHHHHHhhhhccCcccccCCCCCHH---HHHHHHHH
Confidence 37999999999999999998 6999999753 34899999999999988 4678889999877 44455555
Q ss_pred CCchhh
Q 037024 87 GSRWSV 92 (238)
Q Consensus 87 G~~W~~ 92 (238)
+..|++
T Consensus 77 ~~~wsq 82 (83)
T d2ckxa1 77 HAYWSQ 82 (83)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 556754
No 9
>d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.4e-16 Score=105.35 Aligned_cols=54 Identities=30% Similarity=0.615 Sum_probs=48.3
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCCCceecccccC-CCCCcchhhhhhccccCCCCC
Q 037024 13 KRGPWSAEEDSILKNYLEQFGNGGNWIALPKKAG-LNRCGKSCRLRWLNYLRPDIK 67 (238)
Q Consensus 13 ~kg~WT~eED~~L~~~v~~~g~~~~W~~Ia~~~~-~~Rt~~qcr~Rw~~~L~p~i~ 67 (238)
++++||+|||++|+++|.+||. ++|..||+.++ .+||+.||++||.++++|.++
T Consensus 1 Kr~~WT~eEd~~L~~~V~~~G~-~~W~~I~~~~~~~~Rt~~q~k~Rwrn~~k~~~N 55 (55)
T d1w0ua_ 1 KKQKWTVEESEWVKAGVQKYGE-GNWAAISKNYPFVNRTAVMIKDRWRTMKRLGMN 55 (55)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCT-TCHHHHHHHSCCSSCCHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHHHHhCC-ChHHHHHhhcCCCCcCHHHHHHHHHHHhcCCCC
Confidence 5789999999999999999998 69999998732 389999999999999988764
No 10
>d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=7.6e-16 Score=101.77 Aligned_cols=51 Identities=24% Similarity=0.378 Sum_probs=46.7
Q ss_pred CCCCCCHHHHHHHHHHHHhhC-Cchhhhccc--CCCCCHHHHHHHHHHhhchhh
Q 037024 67 KHGGFTKEEDTIICNLYCTMG-SRWSVIASQ--LPGRTDNDVKNYWNTKLKKNV 117 (238)
Q Consensus 67 ~k~~WT~eED~~L~~~v~~~G-~~W~~Ia~~--l~gRt~~~cr~Rw~~~l~~~~ 117 (238)
++.+||+|||++|+++|.+|| .+|..||+. +++||+.||++||++++++.+
T Consensus 1 Kr~~WT~eEd~~L~~~V~~~G~~~W~~I~~~~~~~~Rt~~q~k~Rwrn~~k~~~ 54 (55)
T d1w0ua_ 1 KKQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMKRLGM 54 (55)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCChHHHHHhhcCCCCcCHHHHHHHHHHHhcCCC
Confidence 478999999999999999999 589999987 569999999999999998865
No 11
>d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=1.9e-15 Score=98.72 Aligned_cols=48 Identities=29% Similarity=0.369 Sum_probs=43.5
Q ss_pred CCCCCCHHHHHHHHHHHHhhC-CchhhhcccC--CCCCHHHHHHHHHHhhc
Q 037024 67 KHGGFTKEEDTIICNLYCTMG-SRWSVIASQL--PGRTDNDVKNYWNTKLK 114 (238)
Q Consensus 67 ~k~~WT~eED~~L~~~v~~~G-~~W~~Ia~~l--~gRt~~~cr~Rw~~~l~ 114 (238)
++++||+|||+.|+++|.+|| ++|..||..+ ++||+.||++||+++.+
T Consensus 1 kr~~WT~eED~~L~~~v~~~G~~~W~~I~~~~~~~~Rt~~q~r~Rw~nl~K 51 (52)
T d1w0ta_ 1 KRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKK 51 (52)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHHHhhcCCCCCCHHHHHHHHHHHHC
Confidence 478999999999999999999 5899999875 49999999999998764
No 12
>d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.55 E-value=6.8e-16 Score=98.72 Aligned_cols=47 Identities=26% Similarity=0.599 Sum_probs=44.2
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCCCceecccccCCCCCcchhhhhhccccC
Q 037024 14 RGPWSAEEDSILKNYLEQFGNGGNWIALPKKAGLNRCGKSCRLRWLNYLR 63 (238)
Q Consensus 14 kg~WT~eED~~L~~~v~~~g~~~~W~~Ia~~~~~~Rt~~qcr~Rw~~~L~ 63 (238)
|.+||+|||++|+++|.+||. +|..||..|+ +||+.||+.||.++|.
T Consensus 1 K~~WT~eED~~L~~~v~~~G~--~W~~Ia~~~~-gRt~~~~knr~~~~lr 47 (47)
T d1gv2a2 1 KTSWTEEEDRIIYQAHKRLGN--RWAEIAKLLP-GRTDNAIKNHWNSTMR 47 (47)
T ss_dssp CCCCCHHHHHHHHHHHHHHSS--CHHHHHTTCT-TCCHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHHhh--HHHHHHhHcC-CCCHHHHHHHHHHHcC
Confidence 579999999999999999997 8999999998 9999999999998763
No 13
>d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=2.9e-15 Score=102.10 Aligned_cols=57 Identities=26% Similarity=0.356 Sum_probs=52.0
Q ss_pred CCCCCHHHHHHHHHHHHhhCCchhhhcccCCCCCHHHHHHHHHHhhchhhhcCCCCh
Q 037024 68 HGGFTKEEDTIICNLYCTMGSRWSVIASQLPGRTDNDVKNYWNTKLKKNVLAGKLSD 124 (238)
Q Consensus 68 k~~WT~eED~~L~~~v~~~G~~W~~Ia~~l~gRt~~~cr~Rw~~~l~~~~~~~~~t~ 124 (238)
...||+|||.+|++++..||.+|..||..||+||+.||++||+.++++..+.+....
T Consensus 2 ~~~WT~eEd~~l~~~~~~~G~~W~~Ia~~~~~Rt~~q~k~ry~~~~~~~~k~~~~~~ 58 (65)
T d2cu7a1 2 SVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGLDKE 58 (65)
T ss_dssp CCCCCHHHHHHHHHHHHHTCSCHHHHHHHHSSSCHHHHHHHHHHHHHHHSCSCTTCC
T ss_pred CCCCCHHHHHHHHHHHHHhcchHHHHHHHcCCCCHHHHHHHHHHHHHHHHhcCCCCC
Confidence 357999999999999999999999999999999999999999999999877666543
No 14
>d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.7e-15 Score=98.87 Aligned_cols=49 Identities=31% Similarity=0.527 Sum_probs=44.0
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCCCceecccccC-CCCCcchhhhhhcccc
Q 037024 13 KRGPWSAEEDSILKNYLEQFGNGGNWIALPKKAG-LNRCGKSCRLRWLNYL 62 (238)
Q Consensus 13 ~kg~WT~eED~~L~~~v~~~g~~~~W~~Ia~~~~-~~Rt~~qcr~Rw~~~L 62 (238)
++++||+|||++|+++|.+||. ++|..||+.++ .+||+.||++||.++.
T Consensus 1 kr~~WT~eED~~L~~~v~~~G~-~~W~~I~~~~~~~~Rt~~q~r~Rw~nl~ 50 (52)
T d1w0ta_ 1 KRQAWLWEEDKNLRSGVRKYGE-GNWSKILLHYKFNNRTSVMLKDRWRTMK 50 (52)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCT-TCHHHHHHHSCCSSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCC-CCHHHHHhhcCCCCCCHHHHHHHHHHHH
Confidence 5789999999999999999998 69999998653 3899999999999864
No 15
>d2ckxa1 a.4.1.3 (A:578-660) Telomere binding protein TBP1 {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=99.51 E-value=1e-14 Score=104.14 Aligned_cols=57 Identities=21% Similarity=0.342 Sum_probs=49.9
Q ss_pred CCCHHHHHHHHHHHHhhC-Cchhhhccc----CCCCCHHHHHHHHHHhhc-----hhhhcCCCChHH
Q 037024 70 GFTKEEDTIICNLYCTMG-SRWSVIASQ----LPGRTDNDVKNYWNTKLK-----KNVLAGKLSDNT 126 (238)
Q Consensus 70 ~WT~eED~~L~~~v~~~G-~~W~~Ia~~----l~gRt~~~cr~Rw~~~l~-----~~~~~~~~t~~e 126 (238)
+||.|||+.|+++|.+|| ++|..|++. +++||+.||++||+++|+ +..+++.++++|
T Consensus 2 ~WT~eEd~~L~~~V~~~G~~~W~~I~~~~~~~~~~Rt~~qck~RWrn~l~~~~~~~~~~~~~~~p~e 68 (83)
T d2ckxa1 2 PFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQRRGEPVPQD 68 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCHHHHHHHHCTTCTTSCHHHHHHHHHHHHHHHHSCGGGCCSSCCCHH
T ss_pred CCCHHHHHHHHHHHHHHCcccHHHHHHHHHhhccCCCHHHHHHHHHHHhhhhccCcccccCCCCCHH
Confidence 799999999999999999 589999974 689999999999999996 455677787665
No 16
>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.8e-15 Score=96.70 Aligned_cols=44 Identities=23% Similarity=0.617 Sum_probs=41.9
Q ss_pred CCCHHHHHHHHHHHHHhCCCCCceecccccCCCCCcchhhhhhccc
Q 037024 16 PWSAEEDSILKNYLEQFGNGGNWIALPKKAGLNRCGKSCRLRWLNY 61 (238)
Q Consensus 16 ~WT~eED~~L~~~v~~~g~~~~W~~Ia~~~~~~Rt~~qcr~Rw~~~ 61 (238)
.||+|||++|+++|++||. ++|..||+.|+ +||+.||+.||.++
T Consensus 3 ~Wt~eEd~~L~~~v~~~G~-~nW~~Ia~~~~-~Rt~~Qcr~r~~~~ 46 (47)
T d1x41a1 3 SWTAQEEMALLEAVMDCGF-GNWQDVANQMC-TKTKEECEKHYMKY 46 (47)
T ss_dssp SSCHHHHHHHHHHHHHTCT-TCHHHHHHHHT-TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCC-ccHHHHHHHcC-CCCHHHHHHHHHHh
Confidence 4999999999999999998 69999999999 99999999999876
No 17
>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=7.6e-15 Score=93.77 Aligned_cols=43 Identities=16% Similarity=0.360 Sum_probs=41.0
Q ss_pred CCCHHHHHHHHHHHHhhC-CchhhhcccCCCCCHHHHHHHHHHh
Q 037024 70 GFTKEEDTIICNLYCTMG-SRWSVIASQLPGRTDNDVKNYWNTK 112 (238)
Q Consensus 70 ~WT~eED~~L~~~v~~~G-~~W~~Ia~~l~gRt~~~cr~Rw~~~ 112 (238)
.||.+||.+|+++|..|| ++|..||..|++||+.||++||.++
T Consensus 3 ~Wt~eEd~~L~~~v~~~G~~nW~~Ia~~~~~Rt~~Qcr~r~~~~ 46 (47)
T d1x41a1 3 SWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKY 46 (47)
T ss_dssp SSCHHHHHHHHHHHHHTCTTCHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCccHHHHHHHcCCCCHHHHHHHHHHh
Confidence 599999999999999999 5799999999999999999999876
No 18
>d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=4.9e-14 Score=94.49 Aligned_cols=50 Identities=14% Similarity=0.253 Sum_probs=45.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCC----chhhhcccCCCCCHHHHHHHHHHh
Q 037024 63 RPDIKHGGFTKEEDTIICNLYCTMGS----RWSVIASQLPGRTDNDVKNYWNTK 112 (238)
Q Consensus 63 ~p~i~k~~WT~eED~~L~~~v~~~G~----~W~~Ia~~l~gRt~~~cr~Rw~~~ 112 (238)
.+...+++||++||.+|+++|..||. +|..||..|||||+.||++||..+
T Consensus 7 ~~~~~~~~WT~eEd~~L~~~v~~~~~~~~~~W~~IA~~l~~Rt~~qc~~R~~~L 60 (60)
T d2cqra1 7 RARSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVPSKSKEDCIARYKLL 60 (60)
T ss_dssp TTTCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCSSSCHHHHHHHHHHH
T ss_pred cCCcCCCCcCHHHHHHHHHHHHHcCCccchHHHHHHHHcCCCCHHHHHHHHHHC
Confidence 45667889999999999999999994 599999999999999999999754
No 19
>d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=3.8e-14 Score=95.05 Aligned_cols=52 Identities=19% Similarity=0.518 Sum_probs=46.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhCCCC--CceecccccCCCCCcchhhhhhcc
Q 037024 8 DKANVKRGPWSAEEDSILKNYLEQFGNGG--NWIALPKKAGLNRCGKSCRLRWLN 60 (238)
Q Consensus 8 ~k~~~~kg~WT~eED~~L~~~v~~~g~~~--~W~~Ia~~~~~~Rt~~qcr~Rw~~ 60 (238)
.++...+++||+|||++|+++|..||... +|..||+.|+ +||+.||+.||..
T Consensus 6 ~~~~~~~~~WT~eEd~~L~~~v~~~~~~~~~~W~~IA~~l~-~Rt~~qc~~R~~~ 59 (60)
T d2cqra1 6 ERARSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVP-SKSKEDCIARYKL 59 (60)
T ss_dssp CTTTCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCS-SSCHHHHHHHHHH
T ss_pred ccCCcCCCCcCHHHHHHHHHHHHHcCCccchHHHHHHHHcC-CCCHHHHHHHHHH
Confidence 56778899999999999999999999731 5999999998 9999999999964
No 20
>d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=2e-14 Score=97.90 Aligned_cols=58 Identities=22% Similarity=0.425 Sum_probs=51.8
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCCceecccccCCCCCcchhhhhhccccCCCCCCCCCCHHH
Q 037024 15 GPWSAEEDSILKNYLEQFGNGGNWIALPKKAGLNRCGKSCRLRWLNYLRPDIKHGGFTKEE 75 (238)
Q Consensus 15 g~WT~eED~~L~~~v~~~g~~~~W~~Ia~~~~~~Rt~~qcr~Rw~~~L~p~i~k~~WT~eE 75 (238)
..||+|||++|+++|..||. +|..||..|+ +||+.||+.||.+++.+..+.+.+...+
T Consensus 3 ~~WT~eEd~~l~~~~~~~G~--~W~~Ia~~~~-~Rt~~q~k~ry~~~~~~~~k~~~~~~~~ 60 (65)
T d2cu7a1 3 VKWTIEEKELFEQGLAKFGR--RWTKISKLIG-SRTVLQVKSYARQYFKNKVKCGLDKETP 60 (65)
T ss_dssp CCCCHHHHHHHHHHHHHTCS--CHHHHHHHHS-SSCHHHHHHHHHHHHHHHSCSCTTCCCS
T ss_pred CCCCHHHHHHHHHHHHHhcc--hHHHHHHHcC-CCCHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 57999999999999999996 9999999998 9999999999999998877777665443
No 21
>d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.36 E-value=3.3e-13 Score=97.38 Aligned_cols=68 Identities=19% Similarity=0.213 Sum_probs=61.5
Q ss_pred CCCcchhhhhhccccCCCCCCCCCCHHHHHHHHHHHHhhCCc---hhhhcccCCCCCHHHHHHHHHHhhch
Q 037024 48 NRCGKSCRLRWLNYLRPDIKHGGFTKEEDTIICNLYCTMGSR---WSVIASQLPGRTDNDVKNYWNTKLKK 115 (238)
Q Consensus 48 ~Rt~~qcr~Rw~~~L~p~i~k~~WT~eED~~L~~~v~~~G~~---W~~Ia~~l~gRt~~~cr~Rw~~~l~~ 115 (238)
..+..++..++.+...+......||.|||.+|++.++++|.+ |..||+.|+|||++||++||..+++-
T Consensus 13 ~~t~~~v~A~n~~~~s~G~~~~~WTrEEDriIL~~~q~~G~~~~tw~~Ia~~L~~Rs~~qvr~Rf~~Lm~l 83 (95)
T d1ug2a_ 13 KASEATVCANNSKVSSTGEKVVLWTREADRVILTMCQEQGAQPHTFSVISQQLGNKTPVEVSHRFRELMQL 83 (95)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCSSSCHHHHHHHHHHHHHTTSCTTTHHHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred CCCccccccccCccCCCCCccCCcCHHHHHHHHHHHHHcCCcHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 677777888888888888888899999999999999999977 99999999999999999999877764
No 22
>d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}
Probab=99.35 E-value=3.4e-13 Score=91.16 Aligned_cols=46 Identities=20% Similarity=0.417 Sum_probs=41.7
Q ss_pred CCCCHHHHHHHHHHHHhhCC----chhhhcccCCCCCHHHHHHHHHHhhc
Q 037024 69 GGFTKEEDTIICNLYCTMGS----RWSVIASQLPGRTDNDVKNYWNTKLK 114 (238)
Q Consensus 69 ~~WT~eED~~L~~~v~~~G~----~W~~Ia~~l~gRt~~~cr~Rw~~~l~ 114 (238)
.+||+|||.+|++++..||. +|..||..|||||+.||++||+.++.
T Consensus 2 ~~WT~eEd~~L~~~v~~~~~~~~~~W~~Ia~~l~gRt~~qc~~r~~~L~~ 51 (63)
T d2cjja1 2 RPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVE 51 (63)
T ss_dssp CSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHSTTCCHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCCCCchHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 47999999999999999994 59999999999999999999975543
No 23
>d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}
Probab=99.25 E-value=5.4e-13 Score=90.13 Aligned_cols=45 Identities=18% Similarity=0.467 Sum_probs=40.5
Q ss_pred CCCCHHHHHHHHHHHHHhCCC--CCceecccccCCCCCcchhhhhhcc
Q 037024 15 GPWSAEEDSILKNYLEQFGNG--GNWIALPKKAGLNRCGKSCRLRWLN 60 (238)
Q Consensus 15 g~WT~eED~~L~~~v~~~g~~--~~W~~Ia~~~~~~Rt~~qcr~Rw~~ 60 (238)
.+||+|||++|+++|..||.. ..|..||..|+ +||+.||+.||..
T Consensus 2 ~~WT~eEd~~L~~~v~~~~~~~~~~W~~Ia~~l~-gRt~~qc~~r~~~ 48 (63)
T d2cjja1 2 RPWSAKENKAFERALAVYDKDTPDRWANVARAVE-GRTPEEVKKHYEI 48 (63)
T ss_dssp CSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHST-TCCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCCCCchHHHHHHHHcC-CCCHHHHHHHHHH
Confidence 479999999999999999972 14999999998 9999999999954
No 24
>d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=3e-12 Score=86.88 Aligned_cols=47 Identities=17% Similarity=0.311 Sum_probs=44.1
Q ss_pred CCCCCHHHHHHHHHHHHhhCCchhhhcccCCCCCHHHHHHHHHHhhc
Q 037024 68 HGGFTKEEDTIICNLYCTMGSRWSVIASQLPGRTDNDVKNYWNTKLK 114 (238)
Q Consensus 68 k~~WT~eED~~L~~~v~~~G~~W~~Ia~~l~gRt~~~cr~Rw~~~l~ 114 (238)
...||++||.+|++++..||.+|..||..|||||..||+++|+.+.+
T Consensus 5 ~~~WT~eE~~~f~~~~~~~G~~w~~Ia~~~~~kt~~q~~~~y~~~~k 51 (65)
T d2iw5b1 5 NARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRR 51 (65)
T ss_dssp CSSCCHHHHHHHHHHHHHHSSCHHHHHHHHSSCCHHHHHHHHHHTTT
T ss_pred CCCCCHHHHHHHHHHHHHhCchHHHHHHHcCCCCHHHHHHHHHHHHh
Confidence 35799999999999999999999999999999999999999998764
No 25
>d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=4.6e-12 Score=86.73 Aligned_cols=48 Identities=17% Similarity=0.205 Sum_probs=43.9
Q ss_pred CCCCCCHHHHHHHHHHHHhhCCchhhhcccCCCCCHHHHHHHHHHhhc
Q 037024 67 KHGGFTKEEDTIICNLYCTMGSRWSVIASQLPGRTDNDVKNYWNTKLK 114 (238)
Q Consensus 67 ~k~~WT~eED~~L~~~v~~~G~~W~~Ia~~l~gRt~~~cr~Rw~~~l~ 114 (238)
...+||+|||++|++++..||.+|..||..|||||..||+++|+...+
T Consensus 16 ~~~~WT~eE~~~f~~~~~~~G~~w~~Ia~~~~~rt~~q~~~~yy~~kk 63 (68)
T d1xc5a1 16 VMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKK 63 (68)
T ss_dssp TTTCCCTTTHHHHHHHHHHTTSCSSSHHHHTTTSCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHHCCcHHHHHHHcCCCCHHHHHHHHHHHHC
Confidence 446899999999999999999999999999999999999999986443
No 26
>d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.01 E-value=4e-11 Score=81.18 Aligned_cols=46 Identities=20% Similarity=0.468 Sum_probs=42.8
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCCCceecccccCCCCCcchhhhhhcccc
Q 037024 14 RGPWSAEEDSILKNYLEQFGNGGNWIALPKKAGLNRCGKSCRLRWLNYL 62 (238)
Q Consensus 14 kg~WT~eED~~L~~~v~~~g~~~~W~~Ia~~~~~~Rt~~qcr~Rw~~~L 62 (238)
..+||++||++|.+++..||. +|..||..|+ +||..||+.+|.++.
T Consensus 5 ~~~WT~eE~~~f~~~~~~~G~--~w~~Ia~~~~-~kt~~q~~~~y~~~~ 50 (65)
T d2iw5b1 5 NARWTTEEQLLAVQAIRKYGR--DFQAISDVIG-NKSVVQVKNFFVNYR 50 (65)
T ss_dssp CSSCCHHHHHHHHHHHHHHSS--CHHHHHHHHS-SCCHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHhCc--hHHHHHHHcC-CCCHHHHHHHHHHHH
Confidence 356999999999999999997 8999999998 999999999998765
No 27
>d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.00 E-value=3.8e-11 Score=82.04 Aligned_cols=50 Identities=16% Similarity=0.221 Sum_probs=44.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCCCCceecccccCCCCCcchhhhhhccc
Q 037024 9 KANVKRGPWSAEEDSILKNYLEQFGNGGNWIALPKKAGLNRCGKSCRLRWLNY 61 (238)
Q Consensus 9 k~~~~kg~WT~eED~~L~~~v~~~g~~~~W~~Ia~~~~~~Rt~~qcr~Rw~~~ 61 (238)
++.....+||+|||++|+++|..||. +|..||..|+ +||..||+.+|...
T Consensus 12 ~~~~~~~~WT~eE~~~f~~~~~~~G~--~w~~Ia~~~~-~rt~~q~~~~yy~~ 61 (68)
T d1xc5a1 12 KDRQVMNMWSEQEKETFREKFMQHPK--NFGLIASFLE-RKTVAECVLYYYLT 61 (68)
T ss_dssp TSTTTTTCCCTTTHHHHHHHHHHTTS--CSSSHHHHTT-TSCHHHHHHHHHHH
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHCC--cHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 44556678999999999999999997 9999999998 99999999999754
No 28
>d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.92 E-value=1.3e-10 Score=83.55 Aligned_cols=53 Identities=15% Similarity=0.315 Sum_probs=46.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCC-CCceecccccCCCCCcchhhhhhcccc
Q 037024 9 KANVKRGPWSAEEDSILKNYLEQFGNG-GNWIALPKKAGLNRCGKSCRLRWLNYL 62 (238)
Q Consensus 9 k~~~~kg~WT~eED~~L~~~v~~~g~~-~~W~~Ia~~~~~~Rt~~qcr~Rw~~~L 62 (238)
+++.+...||.|||++|++.++++|.. ..|..||+.|+ +|++.||+.||..++
T Consensus 28 s~G~~~~~WTrEEDriIL~~~q~~G~~~~tw~~Ia~~L~-~Rs~~qvr~Rf~~Lm 81 (95)
T d1ug2a_ 28 STGEKVVLWTREADRVILTMCQEQGAQPHTFSVISQQLG-NKTPVEVSHRFRELM 81 (95)
T ss_dssp CCCCCCSSSCHHHHHHHHHHHHHTTSCTTTHHHHHHHHS-SCCHHHHHHHHHHHH
T ss_pred CCCCccCCcCHHHHHHHHHHHHHcCCcHHHHHHHHHHcC-CCCHHHHHHHHHHHH
Confidence 456678899999999999999999962 24999999998 999999999997643
No 29
>d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.28 E-value=2.9e-07 Score=60.36 Aligned_cols=45 Identities=24% Similarity=0.353 Sum_probs=40.5
Q ss_pred CCCCHHHHHHHHHHHHhhC----CchhhhcccCCCCCHHHHHHHHHHhhc
Q 037024 69 GGFTKEEDTIICNLYCTMG----SRWSVIASQLPGRTDNDVKNYWNTKLK 114 (238)
Q Consensus 69 ~~WT~eED~~L~~~v~~~G----~~W~~Ia~~l~gRt~~~cr~Rw~~~l~ 114 (238)
..||.+|+.+|.+++.+|. .+|..||..+ |||..+|..||..+..
T Consensus 2 ~eWT~ee~~~le~Al~~~P~gt~~RW~~IA~~v-gkt~~ev~~~~k~l~e 50 (59)
T d2cqqa1 2 PEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL-GRSVTDVTTKAKQLKD 50 (59)
T ss_dssp CCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH-TSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCcHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 4799999999999999996 4799999999 9999999999975543
No 30
>d2crga1 a.4.1.3 (A:8-64) Metastasis associated protein MTA3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.22 E-value=9.8e-07 Score=57.47 Aligned_cols=44 Identities=14% Similarity=0.252 Sum_probs=40.2
Q ss_pred CCCCHHHHHHHHHHHHhhCCchhhhccc-CCCCCHHHHHHHHHHh
Q 037024 69 GGFTKEEDTIICNLYCTMGSRWSVIASQ-LPGRTDNDVKNYWNTK 112 (238)
Q Consensus 69 ~~WT~eED~~L~~~v~~~G~~W~~Ia~~-l~gRt~~~cr~Rw~~~ 112 (238)
..||+||-.++.+.+..||.+|..|++. +|+||..+|.+.|...
T Consensus 2 d~WT~eE~~~F~~~~~~yGKdf~~I~~~~v~~Ks~~~~v~fYY~~ 46 (57)
T d2crga1 2 EEWSASEACLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMW 46 (57)
T ss_dssp CCCCHHHHHHHHHHHHHTCSCHHHHHHTTCSSSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcccHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 3699999999999999999999999985 6999999999998743
No 31
>d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.11 E-value=2.4e-07 Score=60.78 Aligned_cols=45 Identities=18% Similarity=0.341 Sum_probs=39.4
Q ss_pred CCCCHHHHHHHHHHHHHhC--CCCCceecccccCCCCCcchhhhhhccc
Q 037024 15 GPWSAEEDSILKNYLEQFG--NGGNWIALPKKAGLNRCGKSCRLRWLNY 61 (238)
Q Consensus 15 g~WT~eED~~L~~~v~~~g--~~~~W~~Ia~~~~~~Rt~~qcr~Rw~~~ 61 (238)
..||.+|+.+|.+++.+|. ....|..||..+ |||..+|..||..+
T Consensus 2 ~eWT~ee~~~le~Al~~~P~gt~~RW~~IA~~v--gkt~~ev~~~~k~l 48 (59)
T d2cqqa1 2 PEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL--GRSVTDVTTKAKQL 48 (59)
T ss_dssp CCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH--TSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCcHHHHHHHHHH--CCCHHHHHHHHHHH
Confidence 4799999999999999994 335799999999 59999999999754
No 32
>d2crga1 a.4.1.3 (A:8-64) Metastasis associated protein MTA3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.92 E-value=1.9e-06 Score=56.03 Aligned_cols=43 Identities=19% Similarity=0.286 Sum_probs=38.2
Q ss_pred CCCHHHHHHHHHHHHHhCCCCCceecccccCCCCCcchhhhhhcc
Q 037024 16 PWSAEEDSILKNYLEQFGNGGNWIALPKKAGLNRCGKSCRLRWLN 60 (238)
Q Consensus 16 ~WT~eED~~L~~~v~~~g~~~~W~~Ia~~~~~~Rt~~qcr~Rw~~ 60 (238)
.||+||-.++.+++..||. +|..|++.+.++||..||...|..
T Consensus 3 ~WT~eE~~~F~~~~~~yGK--df~~I~~~~v~~Ks~~~~v~fYY~ 45 (57)
T d2crga1 3 EWSASEACLFEEALEKYGK--DFNDIRQDFLPWKSLTSIIEYYYM 45 (57)
T ss_dssp CCCHHHHHHHHHHHHHTCS--CHHHHHHTTCSSSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcc--cHHHHHHHHcCCCCHHHHHHHHHH
Confidence 6999999999999999997 999999864339999999987764
No 33
>d1fexa_ a.4.1.3 (A:) Rap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.70 E-value=2.8e-05 Score=50.58 Aligned_cols=47 Identities=17% Similarity=0.307 Sum_probs=40.5
Q ss_pred CCCCCHHHHHHHHHHHHhhC--------Cc-hhhhcc-cCCCCCHHHHHHHHHHhhc
Q 037024 68 HGGFTKEEDTIICNLYCTMG--------SR-WSVIAS-QLPGRTDNDVKNYWNTKLK 114 (238)
Q Consensus 68 k~~WT~eED~~L~~~v~~~G--------~~-W~~Ia~-~l~gRt~~~cr~Rw~~~l~ 114 (238)
+.+||.+||+.|++.|..+. +. |..+++ .+|.+|-.+.|+||...|+
T Consensus 2 R~~fT~eeD~~l~~yv~~~~~~~~~~~Gn~iwk~l~~~~~~~HtwQSwrdRY~K~L~ 58 (59)
T d1fexa_ 2 RIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLKHLR 58 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSSSCCSHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHhccCcCCccHHHHHHHHHHhcCCCCCHHHHHHHHHHHhc
Confidence 46899999999999998873 22 999985 6799999999999998775
No 34
>d1x58a1 a.4.1.1 (A:8-56) Hypothetical protein 4930532d21rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.30 E-value=0.00024 Score=42.85 Aligned_cols=44 Identities=30% Similarity=0.437 Sum_probs=38.8
Q ss_pred CCCCHHHHHHHHHHHHhhCCchhhhcccC---CCCCHHHHHHHHHHh
Q 037024 69 GGFTKEEDTIICNLYCTMGSRWSVIASQL---PGRTDNDVKNYWNTK 112 (238)
Q Consensus 69 ~~WT~eED~~L~~~v~~~G~~W~~Ia~~l---~gRt~~~cr~Rw~~~ 112 (238)
..||.||-.-|..-|+.+|+.|..|-=.+ |||+..++..+|+.+
T Consensus 2 knft~eEv~YL~~GVK~~G~~WNsILWs~PF~~GR~~vdLA~Ky~~l 48 (49)
T d1x58a1 2 KDFTKEEVNYLFHGVKTMGNHWNSILWSFPFQKGRRAVDLAHKYHRL 48 (49)
T ss_dssp SSCCHHHHHHHHHHHHHHCSCHHHHHHHSCCCTTCCHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHhcchhhhhhhccCCCCCchhhHHHHHHHhh
Confidence 47999999999999999999999996443 699999999988765
No 35
>d1fexa_ a.4.1.3 (A:) Rap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.01 E-value=0.0001 Score=47.80 Aligned_cols=49 Identities=22% Similarity=0.385 Sum_probs=39.5
Q ss_pred CCCCCHHHHHHHHHHHHHhCCC-------CCceeccc-ccCCCCCcchhhhhhccccC
Q 037024 14 RGPWSAEEDSILKNYLEQFGNG-------GNWIALPK-KAGLNRCGKSCRLRWLNYLR 63 (238)
Q Consensus 14 kg~WT~eED~~L~~~v~~~g~~-------~~W~~Ia~-~~~~~Rt~~qcr~Rw~~~L~ 63 (238)
+.+||.|||++|+++|..+... .=|..+++ .++ .+|-.+-|+||.++|.
T Consensus 2 R~~fT~eeD~~l~~yv~~~~~~~~~~~Gn~iwk~l~~~~~~-~HtwQSwrdRY~K~L~ 58 (59)
T d1fexa_ 2 RIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLT-QHSWQSLKDRYLKHLR 58 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSS-SCCSHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHhccCcCCccHHHHHHHHHHhcCC-CCCHHHHHHHHHHHhc
Confidence 4579999999999999998431 24888874 455 8999999999998874
No 36
>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=96.81 E-value=0.0009 Score=43.91 Aligned_cols=46 Identities=13% Similarity=0.005 Sum_probs=38.2
Q ss_pred CCCCCHHHHHHHHHHHHhhCCchh---hhccc--CCCCCHHHHHHHHHHhh
Q 037024 68 HGGFTKEEDTIICNLYCTMGSRWS---VIASQ--LPGRTDNDVKNYWNTKL 113 (238)
Q Consensus 68 k~~WT~eED~~L~~~v~~~G~~W~---~Ia~~--l~gRt~~~cr~Rw~~~l 113 (238)
+-.||+||.++.+.++..+|..|. .|... ++++|..+|+.+.+.|.
T Consensus 7 R~~WT~elH~~Fv~Av~~lG~~~atpk~I~~~m~v~~lT~~qV~SHlQKYr 57 (64)
T d1irza_ 7 RVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFR 57 (64)
T ss_dssp SCSSCHHHHHHHHHHHHHHCTTTCCHHHHHHHHCCTTCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCccccchHHHHHHcCCCCCCHHHHHHHHHHHH
Confidence 457999999999999999997763 55554 58999999999887664
No 37
>d1wgxa_ a.4.1.3 (A:) Hypothetical protein C14orf106 (KIAA1903) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.44 E-value=0.0011 Score=43.66 Aligned_cols=52 Identities=17% Similarity=0.402 Sum_probs=44.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCC--CCCceecccccCCCCCcchhhhhhccccCC
Q 037024 12 VKRGPWSAEEDSILKNYLEQFGN--GGNWIALPKKAGLNRCGKSCRLRWLNYLRP 64 (238)
Q Consensus 12 ~~kg~WT~eED~~L~~~v~~~g~--~~~W~~Ia~~~~~~Rt~~qcr~Rw~~~L~p 64 (238)
..-+.|+++|-++|-.++..... .+-|..||..+| .|++..|...|+..+..
T Consensus 6 t~d~~W~e~ELqkLh~A~~SlPkh~~gfW~~VA~~VG-tRSaeECQ~ky~~~~~~ 59 (73)
T d1wgxa_ 6 SGDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVG-SRSPEECQRKYMENPRG 59 (73)
T ss_dssp CSSSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTT-TSCHHHHHHHHHHSSSS
T ss_pred CcccccCHHHHHHHHHHHHhcCCCCCccHHHHHHHHc-cCCHHHHHHHHHhCccc
Confidence 34568999999999999998743 258999999999 99999999999877653
No 38
>d1wgxa_ a.4.1.3 (A:) Hypothetical protein C14orf106 (KIAA1903) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.14 E-value=0.0076 Score=39.54 Aligned_cols=50 Identities=10% Similarity=0.281 Sum_probs=43.2
Q ss_pred CCCCCCHHHHHHHHHHHHhhCCc----hhhhcccCCCCCHHHHHHHHHHhhchh
Q 037024 67 KHGGFTKEEDTIICNLYCTMGSR----WSVIASQLPGRTDNDVKNYWNTKLKKN 116 (238)
Q Consensus 67 ~k~~WT~eED~~L~~~v~~~G~~----W~~Ia~~l~gRt~~~cr~Rw~~~l~~~ 116 (238)
..+.|+++|=++|-.++..+... |..||..++.||+..|...|+..++..
T Consensus 7 ~d~~W~e~ELqkLh~A~~SlPkh~~gfW~~VA~~VGtRSaeECQ~ky~~~~~~~ 60 (73)
T d1wgxa_ 7 GDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRSPEECQRKYMENPRGK 60 (73)
T ss_dssp SSSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTTTSCHHHHHHHHHHSSSSS
T ss_pred cccccCHHHHHHHHHHHHhcCCCCCccHHHHHHHHccCCHHHHHHHHHhCcccc
Confidence 34689999999999999988732 999999999999999999998766543
No 39
>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=95.43 E-value=0.0055 Score=39.99 Aligned_cols=48 Identities=8% Similarity=0.083 Sum_probs=35.7
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCCCc--eecccccC-CCCCcchhhhhhccc
Q 037024 13 KRGPWSAEEDSILKNYLEQFGNGGNW--IALPKKAG-LNRCGKSCRLRWLNY 61 (238)
Q Consensus 13 ~kg~WT~eED~~L~~~v~~~g~~~~W--~~Ia~~~~-~~Rt~~qcr~Rw~~~ 61 (238)
.+-.||+||.++.+.+|..+|. ..| ..|.+.|+ +++|..|++.+.+.|
T Consensus 6 ~R~~WT~elH~~Fv~Av~~lG~-~~atpk~I~~~m~v~~lT~~qV~SHlQKY 56 (64)
T d1irza_ 6 PRVLWTHELHNKFLAAVDHLGV-ERAVPKKILDLMNVDKLTRENVASHLQKF 56 (64)
T ss_dssp SSCSSCHHHHHHHHHHHHHHCT-TTCCHHHHHHHHCCTTCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCc-cccchHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 4567999999999999999997 344 35655543 278889998765543
No 40
>d1x58a1 a.4.1.1 (A:8-56) Hypothetical protein 4930532d21rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.19 E-value=0.0041 Score=37.30 Aligned_cols=45 Identities=18% Similarity=0.248 Sum_probs=37.2
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCCCceecccccC--CCCCcchhhhhhcc
Q 037024 14 RGPWSAEEDSILKNYLEQFGNGGNWIALPKKAG--LNRCGKSCRLRWLN 60 (238)
Q Consensus 14 kg~WT~eED~~L~~~v~~~g~~~~W~~Ia~~~~--~~Rt~~qcr~Rw~~ 60 (238)
+..||.||-.-|...|+++|. .|+.|--.++ +||++.....+|..
T Consensus 1 Rknft~eEv~YL~~GVK~~G~--~WNsILWs~PF~~GR~~vdLA~Ky~~ 47 (49)
T d1x58a1 1 RKDFTKEEVNYLFHGVKTMGN--HWNSILWSFPFQKGRRAVDLAHKYHR 47 (49)
T ss_dssp SSSCCHHHHHHHHHHHHHHCS--CHHHHHHHSCCCTTCCHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHhcc--hhhhhhhccCCCCCchhhHHHHHHHh
Confidence 356999999999999999997 9998865443 58999888877764
No 41
>d1ofcx2 a.4.1.13 (X:851-978) SLIDE domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=91.83 E-value=0.12 Score=37.80 Aligned_cols=52 Identities=17% Similarity=0.313 Sum_probs=41.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhC-Cc---hhhhccc------------CCCCCHHHHHHHHHHhhchh
Q 037024 65 DIKHGGFTKEEDTIICNLYCTMG-SR---WSVIASQ------------LPGRTDNDVKNYWNTKLKKN 116 (238)
Q Consensus 65 ~i~k~~WT~eED~~L~~~v~~~G-~~---W~~Ia~~------------l~gRt~~~cr~Rw~~~l~~~ 116 (238)
..++..+|+|||..|+-++.+|| .+ |..|-.. +..||+..+..|..++++--
T Consensus 46 ~nk~k~yteeEDRfLl~~~~~~G~~~~~~~e~ir~~Ir~~p~FrFDwf~kSRt~~el~rR~~tLi~~i 113 (128)
T d1ofcx2 46 NNKGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRCNTLITLI 113 (128)
T ss_dssp TCCCSSCCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHCGGGTTCHHHHTCCHHHHHHHHHHHHHHH
T ss_pred ccCCCccCHHHHHHHHHHHHHhcCCCccHHHHHHHHHHhCcchhhhhHhccCCHHHHHHHHHHHHHHH
Confidence 44555799999999999999999 45 8887421 24699999999999888753
No 42
>d1ofcx1 a.4.1.3 (X:799-850) SANT domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=90.31 E-value=0.35 Score=29.68 Aligned_cols=41 Identities=22% Similarity=0.285 Sum_probs=36.7
Q ss_pred CCCHHHHHHHHHHHHhhC-CchhhhcccCCCCCHHHHHHHHH
Q 037024 70 GFTKEEDTIICNLYCTMG-SRWSVIASQLPGRTDNDVKNYWN 110 (238)
Q Consensus 70 ~WT~eED~~L~~~v~~~G-~~W~~Ia~~l~gRt~~~cr~Rw~ 110 (238)
.|+.-|=..++++..+|| .+-..||..|.|+|...|+....
T Consensus 1 ~WnrrdF~~Fi~a~ekyGR~d~~~Ia~e~~~Kt~eEV~~Y~~ 42 (52)
T d1ofcx1 1 AWTKRDFNQFIKANEKYGRDDIDNIAKDVEGKTPEEVIEYNA 42 (52)
T ss_dssp TCCHHHHHHHHHHHHHHCTTCHHHHTTSSTTCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCHHHHHHHHH
Confidence 499999999999999999 57999999999999999987543
No 43
>d1ofcx1 a.4.1.3 (X:799-850) SANT domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=83.75 E-value=0.47 Score=29.03 Aligned_cols=38 Identities=11% Similarity=0.250 Sum_probs=34.0
Q ss_pred CCCHHHHHHHHHHHHHhCCCCCceecccccCCCCCcchhh
Q 037024 16 PWSAEEDSILKNYLEQFGNGGNWIALPKKAGLNRCGKSCR 55 (238)
Q Consensus 16 ~WT~eED~~L~~~v~~~g~~~~W~~Ia~~~~~~Rt~~qcr 55 (238)
.|+.-|=+.++.+..+||. .+-..||..|. ++|...++
T Consensus 1 ~WnrrdF~~Fi~a~ekyGR-~d~~~Ia~e~~-~Kt~eEV~ 38 (52)
T d1ofcx1 1 AWTKRDFNQFIKANEKYGR-DDIDNIAKDVE-GKTPEEVI 38 (52)
T ss_dssp TCCHHHHHHHHHHHHHHCT-TCHHHHTTSST-TCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH-hhHHHHHHHhc-CCCHHHHH
Confidence 4999999999999999998 59999999997 88888764
No 44
>d1ofcx2 a.4.1.13 (X:851-978) SLIDE domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=79.67 E-value=0.63 Score=33.81 Aligned_cols=48 Identities=21% Similarity=0.199 Sum_probs=34.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCCC---ceecccccC-----------CCCCcchhhhhhc
Q 037024 11 NVKRGPWSAEEDSILKNYLEQFGNGGN---WIALPKKAG-----------LNRCGKSCRLRWL 59 (238)
Q Consensus 11 ~~~kg~WT~eED~~L~~~v~~~g~~~~---W~~Ia~~~~-----------~~Rt~~qcr~Rw~ 59 (238)
+-++..+|.|||.-|+-++.+||- ++ |..|-..+. ..||+..+..|-.
T Consensus 46 ~nk~k~yteeEDRfLl~~~~~~G~-~~~~~~e~ir~~Ir~~p~FrFDwf~kSRt~~el~rR~~ 107 (128)
T d1ofcx2 46 NNKGKNYTEIEDRFLVCMLHKLGF-DKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRCN 107 (128)
T ss_dssp TCCCSSCCHHHHHHHHHHHHHHCT-TSTTHHHHHHHHHHHCGGGTTCHHHHTCCHHHHHHHHH
T ss_pred ccCCCccCHHHHHHHHHHHHHhcC-CCccHHHHHHHHHHhCcchhhhhHhccCCHHHHHHHHH
Confidence 445567999999999999999998 57 777754332 1566666655543
No 45
>d1kkxa_ a.4.3.1 (A:) Transcription regulator Adr6 (Swi1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=68.82 E-value=1.3 Score=30.61 Aligned_cols=39 Identities=18% Similarity=0.301 Sum_probs=31.4
Q ss_pred HHHHHHHhhCC--------chhhhcccCCCCCHHHHHHHHHHhhchh
Q 037024 78 IICNLYCTMGS--------RWSVIASQLPGRTDNDVKNYWNTKLKKN 116 (238)
Q Consensus 78 ~L~~~v~~~G~--------~W~~Ia~~l~gRt~~~cr~Rw~~~l~~~ 116 (238)
.|..+|.++|+ .|..||..|.--.+.+++..|..+|.+-
T Consensus 38 ~Ly~~V~~~GG~~~V~~~~~W~~va~~lg~~~~~~lr~~Y~~~L~~y 84 (102)
T d1kkxa_ 38 YLYMLVQKFGGADQVTRTQQWSMVAQRLQISDYQQLESIYFRILLPY 84 (102)
T ss_dssp HHHHHHTTTSCHHHHTTSHHHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcChHHhcccCcHHHHHHHHCCChHHHHHHHHHHHHHHH
Confidence 46677777773 4999999997677889999999998875
No 46
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=62.62 E-value=2.4 Score=26.25 Aligned_cols=44 Identities=11% Similarity=0.147 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhhC-CchhhhcccCCCCCHHHHHHHHHHhhchhhh
Q 037024 74 EEDTIICNLYCTMG-SRWSVIASQLPGRTDNDVKNYWNTKLKKNVL 118 (238)
Q Consensus 74 eED~~L~~~v~~~G-~~W~~Ia~~l~gRt~~~cr~Rw~~~l~~~~~ 118 (238)
+=|.+|+.+...-+ -.+..||+.+ |-+...|+.|...+....+.
T Consensus 5 ~~D~~IL~~L~~~~r~s~~eiA~~l-~ls~~~v~~Ri~rL~~~GiI 49 (63)
T d2cg4a1 5 NLDRGILEALMGNARTAYAELAKQF-GVSPETIHVRVEKMKQAGII 49 (63)
T ss_dssp HHHHHHHHHHHHCTTSCHHHHHHHH-TSCHHHHHHHHHHHHHHTSE
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHH-CcCHHHHHHHHHHHHHCCCe
Confidence 34778888888877 5799999999 99999999999988777644
No 47
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=61.39 E-value=3.8 Score=24.96 Aligned_cols=45 Identities=16% Similarity=0.183 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhhC-CchhhhcccCCCCCHHHHHHHHHHhhchhhhc
Q 037024 74 EEDTIICNLYCTMG-SRWSVIASQLPGRTDNDVKNYWNTKLKKNVLA 119 (238)
Q Consensus 74 eED~~L~~~v~~~G-~~W~~Ia~~l~gRt~~~cr~Rw~~~l~~~~~~ 119 (238)
+-|.+|+.+...-+ -.+..||+.+ |-+...|..|...+....+..
T Consensus 3 ~~D~~Il~~L~~n~r~s~~eiA~~l-~ls~~~v~~Ri~~L~~~giI~ 48 (60)
T d2cyya1 3 EIDKKIIKILQNDGKAPLREISKIT-GLAESTIHERIRKLRESGVIK 48 (60)
T ss_dssp HHHHHHHHHHHHCTTCCHHHHHHHH-CSCHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHH-CcCHHHHHHHHHHHHHCCCeE
Confidence 45788888888877 4799999999 899999999999888877654
No 48
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=58.12 E-value=3.2 Score=25.66 Aligned_cols=45 Identities=7% Similarity=-0.053 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHhhC-CchhhhcccCCCCCHHHHHHHHHHhhchhhhc
Q 037024 74 EEDTIICNLYCTMG-SRWSVIASQLPGRTDNDVKNYWNTKLKKNVLA 119 (238)
Q Consensus 74 eED~~L~~~v~~~G-~~W~~Ia~~l~gRt~~~cr~Rw~~~l~~~~~~ 119 (238)
+=|.+|+.+....| -....||+.+ |-+...|..|...+....+..
T Consensus 5 ~~D~~IL~~L~~n~r~s~~~iA~~l-gis~~tv~~Ri~~L~~~giI~ 50 (63)
T d2cfxa1 5 QIDLNIIEELKKDSRLSMRELGRKI-KLSPPSVTERVRQLESFGIIK 50 (63)
T ss_dssp HHHHHHHHHHHHCSCCCHHHHHHHH-TCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHH-CcCHHHHHHHHHHHHHCCCee
Confidence 44778888888877 4699999999 999999999999887776543
No 49
>d1c20a_ a.4.3.1 (A:) DNA-binding domain from the dead ringer protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=55.09 E-value=5.3 Score=28.27 Aligned_cols=40 Identities=18% Similarity=0.219 Sum_probs=30.4
Q ss_pred HHHHHHHHhhCC--------chhhhcccCC--CC--C-HHHHHHHHHHhhchh
Q 037024 77 TIICNLYCTMGS--------RWSVIASQLP--GR--T-DNDVKNYWNTKLKKN 116 (238)
Q Consensus 77 ~~L~~~v~~~G~--------~W~~Ia~~l~--gR--t-~~~cr~Rw~~~l~~~ 116 (238)
-.|..+|.+.|+ .|..|++.|. .. + +.+++..|..+|.+-
T Consensus 55 ~~Ly~~V~~~GG~~~V~~~~~W~~va~~lg~~~~~~~~~~~L~~~Y~k~L~~f 107 (128)
T d1c20a_ 55 YELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPY 107 (128)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTHHHHHHHTCCCSSCCSHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHhcCHHHhcccccHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 457888888884 4999999983 22 2 557899999998864
No 50
>d1rp3a2 a.4.13.2 (A:164-234) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=51.87 E-value=7.8 Score=23.74 Aligned_cols=41 Identities=15% Similarity=0.129 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhhCCchhhhcccCCCCCHHHHHHHHHHhhch
Q 037024 74 EEDTIICNLYCTMGSRWSVIASQLPGRTDNDVKNYWNTKLKK 115 (238)
Q Consensus 74 eED~~L~~~v~~~G~~W~~Ia~~l~gRt~~~cr~Rw~~~l~~ 115 (238)
+.+..++.+.-..|-....||..| |-+...|+.+....++.
T Consensus 24 ~~~r~v~~l~~~~~~s~~eIA~~l-gis~~tv~~~~~ra~~~ 64 (71)
T d1rp3a2 24 EREKLVIQLIFYEELPAKEVAKIL-ETSVSRVSQLKAKALER 64 (71)
T ss_dssp HHHHHHHHHHHTSCCCHHHHHHHT-TSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHhCCHHHHHHHH-CCCHHHHHHHHHHHHHH
Confidence 345566666666778899999999 99999999998765543
No 51
>d1i1ga1 a.4.5.32 (A:2-61) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=49.76 E-value=7.5 Score=23.54 Aligned_cols=45 Identities=22% Similarity=0.355 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhhC-CchhhhcccCCCCCHHHHHHHHHHhhchhhhc
Q 037024 74 EEDTIICNLYCTMG-SRWSVIASQLPGRTDNDVKNYWNTKLKKNVLA 119 (238)
Q Consensus 74 eED~~L~~~v~~~G-~~W~~Ia~~l~gRt~~~cr~Rw~~~l~~~~~~ 119 (238)
+-|.+|+.+...-| -....||+.+ |-+...|..|...+....+..
T Consensus 3 ~~D~kIl~~L~~n~r~s~~~lA~~~-gls~~~v~~Ri~~L~~~giI~ 48 (60)
T d1i1ga1 3 ERDKIILEILEKDARTPFTEIAKKL-GISETAVRKRVKALEEKGIIE 48 (60)
T ss_dssp SHHHHHHHHHHHCTTCCHHHHHHHH-TSCHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHH-CcCHHHHHHHHHHHHHCCCeE
Confidence 35788888888877 4699999999 889999999999888877654
No 52
>d1ryua_ a.4.3.1 (A:) SWI-SNF complex protein p270, SMARCF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.62 E-value=5.3 Score=28.00 Aligned_cols=40 Identities=15% Similarity=0.225 Sum_probs=28.7
Q ss_pred HHHHHHHHhhCC--------chhhhcccCC--CCC--HHHHHHHHHHhhchh
Q 037024 77 TIICNLYCTMGS--------RWSVIASQLP--GRT--DNDVKNYWNTKLKKN 116 (238)
Q Consensus 77 ~~L~~~v~~~G~--------~W~~Ia~~l~--gRt--~~~cr~Rw~~~l~~~ 116 (238)
-.|..+|.++|+ .|..||..|. .-+ +.++++.|..+|.+-
T Consensus 53 ~~Ly~~V~~~GG~~~V~~~~~W~~Va~~l~~~~~~~~~~~Lk~~Y~r~L~~y 104 (120)
T d1ryua_ 53 YRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAF 104 (120)
T ss_dssp HHHHHHHHHHTCTTGGGTSSHHHHHHHHTTSCCSSHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHhcCHHhhcccchHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 357777888773 5999999883 222 237888999888875
No 53
>d2bgxa1 a.20.1.1 (A:180-260) Probable N-acetylmuramoyl-L-alanine amidase YbjR, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=42.52 E-value=17 Score=23.54 Aligned_cols=68 Identities=15% Similarity=0.290 Sum_probs=48.2
Q ss_pred CCCCHHHHHHHHHHHHhhCCchhhhcccCCCCCHHHHHHHHHHhhchhhhcCCCChHHhHHHHhhhHHhCC
Q 037024 69 GGFTKEEDTIICNLYCTMGSRWSVIASQLPGRTDNDVKNYWNTKLKKNVLAGKLSDNTQVSVSTIPEEFGN 139 (238)
Q Consensus 69 ~~WT~eED~~L~~~v~~~G~~W~~Ia~~l~gRt~~~cr~Rw~~~l~~~~~~~~~t~~ed~~l~~~~~~~g~ 139 (238)
...++-|...++....++|-. |......+..+.+-.-|+.+.+|....|..+.+.-..+..|+++||.
T Consensus 14 ~~~~~~~~~~~~~~L~k~GY~---i~~~~~~~~~k~vi~AFQrhFRp~~i~G~~D~Et~~Il~~L~~KY~~ 81 (81)
T d2bgxa1 14 APHTPVDTASLLELLARYGYD---VKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQ 81 (81)
T ss_dssp CTTCBCCHHHHHHHHHHHTCC---CCTTCCHHHHHHHHHHHHHHHCTTCCSSCCBHHHHHHHHHHHHHHCC
T ss_pred CCCCchhHHHHHHHHHHcCCC---CCCCCCcHHHHHHHHHHHHHccccccCCcCCHHHHHHHHHHHHHHcC
Confidence 345666777788888999963 22111112223334468899999999999999999999999999984
No 54
>d2bgxa1 a.20.1.1 (A:180-260) Probable N-acetylmuramoyl-L-alanine amidase YbjR, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=38.79 E-value=9.5 Score=24.91 Aligned_cols=66 Identities=18% Similarity=0.293 Sum_probs=47.9
Q ss_pred CCCHHHHHHHHHHHHHhCCCCCceecccccCCCCCcchhhhhhccccCCCCCCCCCCHHHHHHHHHHHHhhC
Q 037024 16 PWSAEEDSILKNYLEQFGNGGNWIALPKKAGLNRCGKSCRLRWLNYLRPDIKHGGFTKEEDTIICNLYCTMG 87 (238)
Q Consensus 16 ~WT~eED~~L~~~v~~~g~~~~W~~Ia~~~~~~Rt~~qcr~Rw~~~L~p~i~k~~WT~eED~~L~~~v~~~G 87 (238)
..++-|...++....+||- .|..... .+..+....-++.+.+|..-.|....|--.+|..|+++||
T Consensus 15 ~~~~~~~~~~~~~L~k~GY-----~i~~~~~-~~~~k~vi~AFQrhFRp~~i~G~~D~Et~~Il~~L~~KY~ 80 (81)
T d2bgxa1 15 PHTPVDTASLLELLARYGY-----DVKPDMT-PREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYG 80 (81)
T ss_dssp TTCBCCHHHHHHHHHHHTC-----CCCTTCC-HHHHHHHHHHHHHHHCTTCCSSCCBHHHHHHHHHHHHHHC
T ss_pred CCCchhHHHHHHHHHHcCC-----CCCCCCC-cHHHHHHHHHHHHHccccccCCcCCHHHHHHHHHHHHHHc
Confidence 3455567788888999997 2321111 1223345556788889999999999999999999999998
No 55
>d1ig6a_ a.4.3.1 (A:) MRF-2 DNA-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.18 E-value=6.7 Score=26.81 Aligned_cols=40 Identities=10% Similarity=0.167 Sum_probs=29.3
Q ss_pred HHHHHHHHhhCC--------chhhhcccCC--CC---CHHHHHHHHHHhhchh
Q 037024 77 TIICNLYCTMGS--------RWSVIASQLP--GR---TDNDVKNYWNTKLKKN 116 (238)
Q Consensus 77 ~~L~~~v~~~G~--------~W~~Ia~~l~--gR---t~~~cr~Rw~~~l~~~ 116 (238)
-.|..+|...|+ .|..||+.|. .. .+..++..|..+|.+-
T Consensus 36 ~~Ly~~V~~~GG~~~V~~~~~W~~ia~~lg~~~~~~~~~~~Lk~~Y~~~L~~y 88 (107)
T d1ig6a_ 36 WTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPY 88 (107)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTHHHHHHHHTCCTTCTTTTTTHHHHHHHHTTTT
T ss_pred HHHHHHHHHhCChhhccccccHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 457788888883 4999999873 11 2468899999888764
No 56
>d1or7a1 a.4.13.2 (A:120-187) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=36.79 E-value=19 Score=21.74 Aligned_cols=40 Identities=15% Similarity=0.064 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhhCCchhhhcccCCCCCHHHHHHHHHHhhc
Q 037024 74 EEDTIICNLYCTMGSRWSVIASQLPGRTDNDVKNYWNTKLK 114 (238)
Q Consensus 74 eED~~L~~~v~~~G~~W~~Ia~~l~gRt~~~cr~Rw~~~l~ 114 (238)
++...++.+....|-.-.+||..+ |-+...|+.+...-++
T Consensus 21 ~~~r~v~~l~~~~~~s~~eIA~~l-gis~~tv~~~l~ra~~ 60 (68)
T d1or7a1 21 EDLRMAITLRELDGLSYEEIAAIM-DCPVGTVRSRIFRARE 60 (68)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHT-TSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHH-CcCHHHHHHHHHHHHH
Confidence 455566666666777889999999 9999999999875543
No 57
>d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.99 E-value=8.2 Score=24.43 Aligned_cols=33 Identities=15% Similarity=0.514 Sum_probs=25.1
Q ss_pred hhhcccCCCCCHHHHHHHHHHhhchhhhcCCCChHHhHHH
Q 037024 91 SVIASQLPGRTDNDVKNYWNTKLKKNVLAGKLSDNTQVSV 130 (238)
Q Consensus 91 ~~Ia~~l~gRt~~~cr~Rw~~~l~~~~~~~~~t~~ed~~l 130 (238)
..||..+.|+|+.++|..+. ....+|++|+..+
T Consensus 37 ~~vA~~ikgkt~eeiR~~f~-------I~~D~t~eEe~~i 69 (70)
T d1nexa1 37 KVVAEMIRGRSPEEIRRTFN-------IVNDFTPEEEAAI 69 (70)
T ss_dssp HHHHHHHTTCCHHHHHHHHT-------CCCCCCHHHHHTC
T ss_pred HHHHHHHccCCHHHHHHHhC-------CCCCCCHHHHHhc
Confidence 56788889999999999884 2446788877543
No 58
>d1dwka1 a.35.1.4 (A:1-86) Cyanase N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.03 E-value=27 Score=22.83 Aligned_cols=30 Identities=17% Similarity=0.058 Sum_probs=23.7
Q ss_pred HHHHHHHHhhCCchhhhcccCCCCCHHHHHH
Q 037024 77 TIICNLYCTMGSRWSVIASQLPGRTDNDVKN 107 (238)
Q Consensus 77 ~~L~~~v~~~G~~W~~Ia~~l~gRt~~~cr~ 107 (238)
++|+.+-.+.|-.|..||..+ |++..-+-.
T Consensus 16 e~Il~AK~~kgltw~~IA~~i-G~s~vwvta 45 (86)
T d1dwka1 16 DAILLSKAKKDLSFAEIADGT-GLAEAFVTA 45 (86)
T ss_dssp HHHHHHHHHTTCCHHHHHTTS-SSCHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHh-CCCHHHHHH
Confidence 466666677889999999999 999875543
No 59
>d1igna2 a.4.1.6 (A:446-594) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.21 E-value=24 Score=25.44 Aligned_cols=26 Identities=15% Similarity=0.231 Sum_probs=22.5
Q ss_pred hhhhcccCCCCCHHHHHHHHHHhhch
Q 037024 90 WSVIASQLPGRTDNDVKNYWNTKLKK 115 (238)
Q Consensus 90 W~~Ia~~l~gRt~~~cr~Rw~~~l~~ 115 (238)
...+++..|..|.++-|+||+..+..
T Consensus 81 Fk~~a~~~P~HT~~sWRDRfRKfv~~ 106 (149)
T d1igna2 81 FKHFAEEHAAHTENAWRDRFRKFLLA 106 (149)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHTHHH
T ss_pred HHHHHHhCcccchhhHHHHHHHHHHh
Confidence 56788889999999999999987764
No 60
>d1vz0a1 a.4.14.1 (A:116-208) Putative partitioning protein ParB/Spo0J {Thermus thermophilus [TaxId: 274]}
Probab=24.41 E-value=75 Score=20.56 Aligned_cols=54 Identities=17% Similarity=0.188 Sum_probs=35.5
Q ss_pred HHHHH-HHHHHHHhhCCchhhhcccCCCCCHHHHHHHHHHh-----hchhhhcCCCChHHhH
Q 037024 73 KEEDT-IICNLYCTMGSRWSVIASQLPGRTDNDVKNYWNTK-----LKKNVLAGKLSDNTQV 128 (238)
Q Consensus 73 ~eED~-~L~~~v~~~G~~W~~Ia~~l~gRt~~~cr~Rw~~~-----l~~~~~~~~~t~~ed~ 128 (238)
+-|+. -+..++ .||..-..||+.+ |++...|.+|-.=+ ++..+..|..+.-.-.
T Consensus 5 piEeA~a~~~L~-e~g~t~~~iA~~~-Gks~~~V~~~LrLl~L~~~v~~~l~~g~Is~ghAr 64 (93)
T d1vz0a1 5 PVEEARGYQALL-EMGLTQEEVARRV-GKARSTVANALRLLQLPPEALEALERGEITAGHAR 64 (93)
T ss_dssp HHHHHHHHHHHH-HTTCCHHHHHHHH-TCCHHHHHHHHHGGGSCHHHHHHHHTTSSCHHHHH
T ss_pred HHHHHHHHHHHH-HcCCCHHHHHHHH-ccchHHHHHHHHHHHHHHHHHHHHHcCCccHHHHH
Confidence 33443 445555 7998999999999 99999998887622 2233456666644333
Done!