Query 037025
Match_columns 366
No_of_seqs 121 out of 568
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 07:50:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037025.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037025hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1172 Na+-independent Cl/HCO 100.0 3E-106 5E-111 846.6 26.5 351 3-363 330-733 (876)
2 TIGR00834 ae anion exchange pr 100.0 4E-105 8E-110 854.9 25.2 348 3-362 339-756 (900)
3 PF00955 HCO3_cotransp: HCO3- 100.0 5E-107 1E-111 831.5 3.2 348 2-362 2-437 (510)
4 COG0659 SUL1 Sulfate permease 98.5 6.5E-06 1.4E-10 87.0 20.2 253 47-332 33-317 (554)
5 TIGR00815 sulP high affinity s 98.2 9E-05 1.9E-09 78.5 19.4 122 49-178 29-151 (563)
6 PRK11660 putative transporter; 97.7 0.0017 3.8E-08 68.9 18.3 110 52-177 47-156 (568)
7 TIGR00801 ncs2 uracil-xanthine 94.0 7.7 0.00017 39.8 19.6 183 41-249 15-206 (415)
8 TIGR03173 pbuX xanthine permea 93.1 5.5 0.00012 40.5 16.9 181 41-249 5-190 (406)
9 KOG0236 Sulfate/bicarbonate/ox 92.3 4.9 0.00011 43.9 16.0 123 50-178 95-220 (665)
10 PRK11412 putative uracil/xanth 90.7 23 0.00049 36.8 19.5 187 41-245 18-210 (433)
11 TIGR03616 RutG pyrimidine util 88.0 35 0.00077 35.2 20.2 169 39-247 38-212 (429)
12 PF00860 Xan_ur_permease: Perm 86.8 30 0.00064 35.0 15.7 188 41-248 11-201 (389)
13 COG2233 UraA Xanthine/uracil p 84.2 58 0.0013 34.1 16.5 231 41-307 26-262 (451)
14 PF00916 Sulfate_transp: Sulfa 80.6 7.3 0.00016 37.0 7.9 36 143-178 4-39 (280)
15 PRK10720 uracil transporter; P 62.4 2E+02 0.0042 29.8 19.0 112 41-173 24-140 (428)
16 PF13792 Sulfate_tra_GLY: Sulf 57.8 6.3 0.00014 31.6 1.6 49 49-103 30-79 (84)
17 TIGR00843 benE benzoate transp 35.3 74 0.0016 32.8 5.5 114 50-181 241-354 (395)
18 PF13172 PepSY_TM_1: PepSY-ass 30.1 85 0.0018 20.5 3.4 24 123-146 6-29 (34)
19 PF10660 MitoNEET_N: Iron-cont 29.5 18 0.00039 27.7 0.0 27 243-275 3-29 (64)
20 PF10337 DUF2422: Protein of u 26.1 3.8E+02 0.0083 27.7 9.1 17 124-140 19-35 (459)
21 PF00916 Sulfate_transp: Sulfa 23.5 79 0.0017 29.9 3.2 100 36-154 148-247 (280)
22 PF12841 YvrJ: YvrJ protein fa 22.1 59 0.0013 22.3 1.5 19 227-245 1-19 (38)
No 1
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-106 Score=846.60 Aligned_cols=351 Identities=38% Similarity=0.587 Sum_probs=315.3
Q ss_pred CcCCCCcccHHhhhhhhccccccchhhhhhcCCcccchhHHHHHhhhhhHHHhccCCcccCCCCcchhHHHHhhhhhhHH
Q 037025 3 RASKPPFRGIANDVRGRALYYKQDWISCIRSGFGMMAPTTYIFFASALPVIAFGEQPAKDTDGSLSTVETLSSTALCGIV 82 (366)
Q Consensus 3 ~~~~~~f~Gl~~DikrR~p~Y~SD~~Dg~~~~~~~las~~flyFa~l~PaItFG~ll~~~T~~~igv~E~lls~ai~Gii 82 (366)
++++|+|||+++|+|||+|||+|||+||+| .||+++++|+||||++|+||||++|+++|+|.+||+|+|+|||+||++
T Consensus 330 ~~tgrlFgGl~~DikrR~p~Y~SD~~Da~~--~~~la~~lfiYfa~l~P~ItFG~ll~~~Tdg~~~v~E~L~stal~Gii 407 (876)
T KOG1172|consen 330 QRTGRLFGGLVLDIKRRLPHYKSDFRDAFN--IQCLAATLFIYFACLLPAITFGGLLGEATDGLIGVVETLLSTALCGII 407 (876)
T ss_pred ccccccchhHHHHHHhhcCCChHHHHHHhc--cccchHHHHHHHHhhhhHhhHHHHhhhhccchHHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999 599999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCceeeeeccchhHHHHHHHHHHhhccccccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHhhhhhhhhHHHH
Q 037025 83 HSVLGGQPLLILGVAEPTVLMYTYLYNFAKDREDLGQKLYLAWAGWVCVWTSLVLFLLAIFNACDLINRFTRIAGELFGM 162 (366)
Q Consensus 83 fslf~gQPL~Ilg~TGP~~vf~~~ly~~~~~~~~~~~~~fl~~~~wvgiW~~~~~~i~a~~~~s~lv~y~TRFTeEiF~~ 162 (366)
||+||||||+|+|+|||++|||+++|+||++++. +||+||+|||+|++++|+++|++|+|.+|+|+||||||||++
T Consensus 408 fslfggQPLlIlg~TgP~lVfe~~lf~f~~~~~~----dyl~~r~wVglW~~~l~illaa~~as~lv~~~TRfteEiF~~ 483 (876)
T KOG1172|consen 408 FSLFGGQPLLILGVTGPLLVFEKALFKFCKDNGL----DYLAFRAWVGLWTAFLLILLAATNASSLVKYITRFTEEIFGL 483 (876)
T ss_pred HHHhcCCceEEEecCccHHHHHHHHHHHHhhCCC----chhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHH
Confidence 9999999999999999999999999999999985 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhccccccCCCC-----------------CCCchhhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccc
Q 037025 163 LIAVLFLQEATKGMDSEFKIPKAE-----------------DSSSEKYQFQWLYTNGLLGIIFTSGLVCTALKSRKARSW 225 (366)
Q Consensus 163 lIs~iFi~eai~~l~~~f~~~~~~-----------------~~~~~~~~~~~~~~~~llsliL~~gtf~~a~~~~~~~~~ 225 (366)
|||+||||||+++++++|+....+ +.....+...|.++++++|++|++||+++++++||+|+|
T Consensus 484 LIs~iFi~eai~kl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~llslil~~gt~~~a~~lr~fr~s 563 (876)
T KOG1172|consen 484 LISLIFIYEAIKKLIKIFKGLPIEFDSKPNPGADWSGPECESVSGTLLGSSCRPDTALLSLILMFGTLFLALTLRKFKSS 563 (876)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcccccccCCcccccccccccccCcccCCCcCCcchHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999988753221 112233455677999999999999999999999998775
Q ss_pred -------ccchhchhhHHHHHHHHHhhccCCCCCCCCCCccccCCCCCCCCCCCCceeecCCCCccHHHHHHHHHHHHHH
Q 037025 226 -------WSFIADYGVPLMVLVWSALSFSVPSKVPSGVPRRLFSPLPWESASLDHWSAIKDMGKVPVAYIFAAFIPAAMI 298 (366)
Q Consensus 226 -------R~~isDfgv~iaI~~~~~~~y~~~~~vp~~~~~~l~~p~~~~p~~~r~W~v~~~~~~~p~~~i~~A~iPAlll 298 (366)
|++|||||+|+||++|++++|+.+...+++++.+...|.++. .+|||++ ++++++|+|++++|++||+++
T Consensus 564 ~yf~~~~R~~isDfgvpisIl~~s~i~~~~~~~~~~kl~vp~~~~~t~~--~~rgw~v-~~~~~~P~~~~~~A~ipalll 640 (876)
T KOG1172|consen 564 RYFPRKVRSLISDFGVPLSILVFSLIDYFGGSVETPKLPVPSVFPPTWP--FDRGWFV-PPFGKNPWWYVFAALIPALLL 640 (876)
T ss_pred CccchHHHHHHHhhhhHHHHHHHHHHHhhccccCCCccccCcCCCCCCc--ccCCeee-CCCCCCCHHHHHHHHHHHHHH
Confidence 699999999999999999999885322223332222232221 1399996 677799999999999999999
Q ss_pred HHHHHhcCC-----------------------------ccccccccCCCCCCCCCCChhhhhhhHHhhhhhccccccccc
Q 037025 299 VGLYFFDHS-----------------------------TLACGLIGLPPSNGVLPQSPMHTKSLAVLKTQFMKKKMVESA 349 (366)
Q Consensus 299 ~iLiFmD~~-----------------------------~~v~sllGLPw~~aa~p~S~~H~~sL~~~~~~~~~~~~~~~~ 349 (366)
+|||||||| |++||+|||||+|||+||||+|++||+++++..++++ ++++
T Consensus 641 ~iLiFmDqqIts~iv~rke~kLKKgsgyH~DLlllgil~~icsllGLPw~~~a~p~S~~H~~SL~v~~~~~apge-~~~i 719 (876)
T KOG1172|consen 641 TILIFMDQQITAVIVNRKENKLKKGSGYHLDLLLLGILTLICSLLGLPWSNAATVQSPMHTKSLAVESETSAPGE-QPQI 719 (876)
T ss_pred HHHHHhcchHHHHHhhcccccCCCCcchhHHHHHHHHHHHHHHhcCCCccccccccCHHHHHHHHHhhcccCCCC-cccc
Confidence 999999999 8899999999999999999999999999999999988 5779
Q ss_pred eeeeeccccchhhh
Q 037025 350 TESIKQKATDSEIY 363 (366)
Q Consensus 350 ~~v~eqr~s~~~~~ 363 (366)
.+|+||||||..++
T Consensus 720 ~~V~EQRvtgll~~ 733 (876)
T KOG1172|consen 720 VGVREQRVTGLLQF 733 (876)
T ss_pred ccchhhhhHHHHHH
Confidence 99999999997654
No 2
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=100.00 E-value=3.7e-105 Score=854.95 Aligned_cols=348 Identities=24% Similarity=0.414 Sum_probs=314.0
Q ss_pred CcCCCCcccHHhhhhhhccccccchhhhhhcCCcccchhHHHHHhhhhhHHHhccCCcccCCCCcchhHHHHhhhhhhHH
Q 037025 3 RASKPPFRGIANDVRGRALYYKQDWISCIRSGFGMMAPTTYIFFASALPVIAFGEQPAKDTDGSLSTVETLSSTALCGIV 82 (366)
Q Consensus 3 ~~~~~~f~Gl~~DikrR~p~Y~SD~~Dg~~~~~~~las~~flyFa~l~PaItFG~ll~~~T~~~igv~E~lls~ai~Gii 82 (366)
+|++++|||+++|+|||+|||+|||+||+| +||++|++||||||++||||||++|+++|+|.|||+|+|+|||+||++
T Consensus 339 ~rtg~~f~Gli~DikRR~p~Y~SD~tDa~~--~q~laa~ifiyFA~L~PaIaFG~ll~~~T~g~~gv~E~Llstai~Gii 416 (900)
T TIGR00834 339 QRTGRPFGGLIRDIKRRYPHYLSDFTDALN--PQCLAAVIFIYFAALSPAITFGGLLGEKTRNMMGVSELLISTAVQGVL 416 (900)
T ss_pred hhcCCccchHHHHHHhhcccchHHHhhhhc--chhHHHHHHHHHHHhhHHhhHHHHHHHhhCCcchHHHHHHHHHHHHHH
Confidence 479999999999999999999999999999 699999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCceeeeeccchhHHHHHHHHHHhhccccccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHhhhhhhhhHHHH
Q 037025 83 HSVLGGQPLLILGVAEPTVLMYTYLYNFAKDREDLGQKLYLAWAGWVCVWTSLVLFLLAIFNACDLINRFTRIAGELFGM 162 (366)
Q Consensus 83 fslf~gQPL~Ilg~TGP~~vf~~~ly~~~~~~~~~~~~~fl~~~~wvgiW~~~~~~i~a~~~~s~lv~y~TRFTeEiF~~ 162 (366)
||+||||||+|+|+|||+++|++++|++|++++. ||++||+|||+|+++||+++|++|+|++|||+||||||||++
T Consensus 417 fslf~GQPL~IlG~TGPilvF~~~ly~~c~~~~~----~yl~~~~WigiW~~~~~~lla~~~~s~lvryiTRFTeEiFa~ 492 (900)
T TIGR00834 417 FALLAAQPLLVVGFSGPLLVFEEAFFSFCESNGL----EYLVGRVWIGLWLVLLVLLLVATEGSFLVRYISRFTQEIFSF 492 (900)
T ss_pred HhhhcCCceEEecCcccHHHHHHHHHHHHhhcCC----chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhHHHHHHH
Confidence 9999999999999999999999999999999984 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhccccccCCC--------------CCCCch---------------hhhhhhhhhhHHHHHHHHHHHH
Q 037025 163 LIAVLFLQEATKGMDSEFKIPKA--------------EDSSSE---------------KYQFQWLYTNGLLGIIFTSGLV 213 (366)
Q Consensus 163 lIs~iFi~eai~~l~~~f~~~~~--------------~~~~~~---------------~~~~~~~~~~~llsliL~~gtf 213 (366)
|||+||||||+++++++|+.++. .|++.. ..+.++.++++++|++|++|||
T Consensus 493 lIs~IFI~eai~~L~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~llsliL~lgTf 572 (900)
T TIGR00834 493 LISLIFIYETFSKLIKIFQEHPLQVFYNTLFCVPPKPQGPSVSALLEKDCSKLGGTLGGNNCRFQPNTALLSLVLMLGTF 572 (900)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHH
Confidence 99999999999999999875321 000000 0111234788999999999999
Q ss_pred HHHHhhccccc-------cccchhchhhHHHHHHHHHhhccCCCCCCCCCCccccCCCCCCCCCC--CCceeecCCCCc-
Q 037025 214 CTALKSRKARS-------WWSFIADYGVPLMVLVWSALSFSVPSKVPSGVPRRLFSPLPWESASL--DHWSAIKDMGKV- 283 (366)
Q Consensus 214 ~~a~~~~~~~~-------~R~~isDfgv~iaI~~~~~~~y~~~~~vp~~~~~~l~~p~~~~p~~~--r~W~v~~~~~~~- 283 (366)
++|++++++|+ .|++|||||+||||++|++++|.++ +++ .+++.+|+.|+|+++ |||++ ++++.+
T Consensus 573 ~~a~~L~~fk~s~yf~~~vR~~isDfgv~iaI~~~t~v~~~~~-~v~---~~kl~Vp~~f~pt~p~~R~W~i-~p~~~~~ 647 (900)
T TIGR00834 573 FLAMFLRKFKNSRYFPGKARRLIGDFGVPISILIMVLVDIFIG-DTY---TQKLSVPSGLKVTNPSARGWFI-PPLGENR 647 (900)
T ss_pred HHHHHHHHhCCCCcCCchhhhhhhhhhHHHHHHHHHHHHHHhc-cCc---ccccCCCCCcCCCCCCCCCeEE-ccccccc
Confidence 99999988765 4899999999999999999999764 332 235778888888865 99995 666655
Q ss_pred --cHHHHHHHHHHHHHHHHHHHhcCC-----------------------------ccccccccCCCCCCCCCCChhhhhh
Q 037025 284 --PVAYIFAAFIPAAMIVGLYFFDHS-----------------------------TLACGLIGLPPSNGVLPQSPMHTKS 332 (366)
Q Consensus 284 --p~~~i~~A~iPAlll~iLiFmD~~-----------------------------~~v~sllGLPw~~aa~p~S~~H~~s 332 (366)
|+|++++|++||++++|||||||| +++||+|||||+||||||||+|++|
T Consensus 648 ~~p~w~~~~A~iPAlll~ILiFmD~nIts~iv~~~e~kLkKgsgyH~Dllllg~~~~v~sllGLPw~~aatv~S~~Hv~s 727 (900)
T TIGR00834 648 PFPWWMMFAAALPALLVFILIFMEQQITTLIVSKKERKLKKGSGFHLDLLLVVGMGGVAALFGLPWLSAATVRSVTHANA 727 (900)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCccccCCCCcccchHHHHHHHHHHHHHhcCCCcccccCCcChhhHhH
Confidence 999999999999999999999999 8899999999999999999999999
Q ss_pred hHHhhhhhccccccccceeeeeccccchhh
Q 037025 333 LAVLKTQFMKKKMVESATESIKQKATDSEI 362 (366)
Q Consensus 333 L~~~~~~~~~~~~~~~~~~v~eqr~s~~~~ 362 (366)
|++++++.++|+ ++++++|+|||+||..+
T Consensus 728 L~v~~~~~~~Ge-~~~i~~V~EQRvT~ll~ 756 (900)
T TIGR00834 728 LTVMSKASAPGE-KAQIQEVREQRVTGLLV 756 (900)
T ss_pred HeeeeeccCCCC-CCccceeEeeehHHHHH
Confidence 999999999998 67799999999999754
No 3
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=100.00 E-value=5.4e-107 Score=831.48 Aligned_cols=348 Identities=33% Similarity=0.583 Sum_probs=53.6
Q ss_pred CCcCCCCcccHHhhhhhhccccccchhhhhhcCCcccchhHHHHHhhhhhHHHhccCCcccCCCCcchhHHHHhhhhhhH
Q 037025 2 WRASKPPFRGIANDVRGRALYYKQDWISCIRSGFGMMAPTTYIFFASALPVIAFGEQPAKDTDGSLSTVETLSSTALCGI 81 (366)
Q Consensus 2 ~~~~~~~f~Gl~~DikrR~p~Y~SD~~Dg~~~~~~~las~~flyFa~l~PaItFG~ll~~~T~~~igv~E~lls~ai~Gi 81 (366)
.+||+|+|||+++|+|||+|||+|||+||+| .||++|++||||||++||||||++|+++|+|.+|++|+|+||++||+
T Consensus 2 l~rtg~~fgGl~~Dikrr~p~Y~SD~~D~~~--~~~~~~~~flyfa~l~PaItFG~ll~~~T~~~~gv~e~l~~~~i~Gi 79 (510)
T PF00955_consen 2 LQRTGRLFGGLINDIKRRLPWYWSDFTDGLN--LQCLAATLFLYFACLSPAITFGGLLGEATDGAIGVMEVLLSTAICGI 79 (510)
T ss_dssp -------------------STTCHHHCCSS---SHHHHHHHHHHHHHHHHHHSSS-SS---------HHHHHHHHHHHHH
T ss_pred Ccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999999999999999999999 69999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCceeeeeccchhHHHHHHHHHHhhccccccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHhhhhhhhhHHH
Q 037025 82 VHSVLGGQPLLILGVAEPTVLMYTYLYNFAKDREDLGQKLYLAWAGWVCVWTSLVLFLLAIFNACDLINRFTRIAGELFG 161 (366)
Q Consensus 82 ifslf~gQPL~Ilg~TGP~~vf~~~ly~~~~~~~~~~~~~fl~~~~wvgiW~~~~~~i~a~~~~s~lv~y~TRFTeEiF~ 161 (366)
+||+||||||+|+|+|||+++||+++|++|+++++ ||+++|+|||+|++++|+++|++|+|.+|||+||||||||+
T Consensus 80 ~f~lf~gQPL~Ilg~TgP~~vf~~~l~~~~~~~~~----~fl~~~~wig~w~~~~~~~~~~~~~s~lv~~~TRfTeEiF~ 155 (510)
T PF00955_consen 80 IFSLFSGQPLTILGSTGPVLVFEKILYKFCKSYGL----DFLPFRAWIGIWTAIFLLVLAAFNASFLVRYITRFTEEIFA 155 (510)
T ss_dssp HHHHCC--------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999984 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhccccccCCC---------------CCCCc---------h----h---------------------
Q 037025 162 MLIAVLFLQEATKGMDSEFKIPKA---------------EDSSS---------E----K--------------------- 192 (366)
Q Consensus 162 ~lIs~iFi~eai~~l~~~f~~~~~---------------~~~~~---------~----~--------------------- 192 (366)
+|||+|||+||+|+++++|+.++- ++++. + +
T Consensus 156 ~lIs~iFi~ea~~~l~~~~~~~p~~~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~g~~~g~~c 235 (510)
T PF00955_consen 156 LLISIIFIYEAIKKLVKIFKKYPLNSDYVTQYSCQCTPPENSNNSTLNPWTNLNNGSINWSNLSNSECENINGELVGTSC 235 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999998864210 00000 0 0
Q ss_pred -hhhhhhhhhHHHHHHHHHHHHHHHHhhccccc-------cccchhchhhHHHHHHHHHhhccCCCCCCCCCCccccCCC
Q 037025 193 -YQFQWLYTNGLLGIIFTSGLVCTALKSRKARS-------WWSFIADYGVPLMVLVWSALSFSVPSKVPSGVPRRLFSPL 264 (366)
Q Consensus 193 -~~~~~~~~~~llsliL~~gtf~~a~~~~~~~~-------~R~~isDfgv~iaI~~~~~~~y~~~~~vp~~~~~~l~~p~ 264 (366)
.+..+.++++++|++|++|||++++.++++|+ .|+++||||+||||++|++++|+.+.++|+ +.+|+
T Consensus 236 ~~~~~~~p~taLlSliL~lgTf~la~~L~~fk~S~yf~~~vR~~isDf~v~iaI~~~~~~~~~~~~~~~k-----L~vp~ 310 (510)
T PF00955_consen 236 DDHVQYQPDTALLSLILALGTFWLAYTLRQFKNSPYFPRWVREIISDFGVPIAILIMTLVDYLFGVDTPK-----LNVPS 310 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCcCccHHHHHhHHhhHHHHHHHHHHHHHHHhcccccc-----cCCCC
Confidence 00123567799999999999999999887755 489999999999999999999887655443 66777
Q ss_pred CCCCCCC--CCceeecCCCCccHHHHHHHHHHHHHHHHHHHhcCC-----------------------------cccccc
Q 037025 265 PWESASL--DHWSAIKDMGKVPVAYIFAAFIPAAMIVGLYFFDHS-----------------------------TLACGL 313 (366)
Q Consensus 265 ~~~p~~~--r~W~v~~~~~~~p~~~i~~A~iPAlll~iLiFmD~~-----------------------------~~v~sl 313 (366)
.++|+.. |+|++ +|++++|+|++++|++||+++++||||||| +++||+
T Consensus 311 ~f~pt~~~~r~W~v-~p~~~~p~w~~~aA~~palll~iL~F~DqnIts~ivn~~e~kLkKg~gyH~DL~llgi~~~v~sl 389 (510)
T PF00955_consen 311 SFKPTSPGKRGWFV-NPFGSLPWWAIFAAIIPALLLTILFFMDQNITSLIVNRPENKLKKGSGYHLDLFLLGIITLVCSL 389 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCCCCeec-CcccCCCHHHHHHHHHHHHHHHHHHHHHHhHhHHHhCChhhccCCCCcccHHHHHHHHHHHHHHH
Confidence 7877654 99995 678899999999999999999999999999 889999
Q ss_pred ccCCCCCCCCCCChhhhhhhHHhhhhhccccccccceeeeeccccchhh
Q 037025 314 IGLPPSNGVLPQSPMHTKSLAVLKTQFMKKKMVESATESIKQKATDSEI 362 (366)
Q Consensus 314 lGLPw~~aa~p~S~~H~~sL~~~~~~~~~~~~~~~~~~v~eqr~s~~~~ 362 (366)
|||||+|||+||||+|++||++++|+.+||| ++++++|+|||+|+..+
T Consensus 390 lGLPw~~aa~~~S~~Hv~sL~~~~~~~~pGe-~~~i~~V~EqRvT~l~~ 437 (510)
T PF00955_consen 390 LGLPWMNAATPQSPMHVRSLAVESETSAPGE-KPKIVGVREQRVTGLLV 437 (510)
T ss_dssp -------------------------------------------------
T ss_pred cCCCCcccCccCCHHHhCcccEEeccccCCC-CCeeCeEEEecccHHHH
Confidence 9999999999999999999999999999998 57799999999998654
No 4
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=98.55 E-value=6.5e-06 Score=87.03 Aligned_cols=253 Identities=20% Similarity=0.227 Sum_probs=165.1
Q ss_pred hhhhh-HHHhccCCcccCCCCcchhHHHHhhhhhhHHHHHhcCCceeeeeccchhHHHHHH-HHHHhhccccccchhhhh
Q 037025 47 ASALP-VIAFGEQPAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTY-LYNFAKDREDLGQKLYLA 124 (366)
Q Consensus 47 a~l~P-aItFG~ll~~~T~~~igv~E~lls~ai~Giifslf~gQPL~Ilg~TGP~~vf~~~-ly~~~~~~~~~~~~~fl~ 124 (366)
+.++| |++|+..-+ ....--|.++.++|++|++|||-|-.|.|.||++.+.... +.+.. ++ ++.
T Consensus 33 ~valP~ama~a~~aG------v~p~~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~v~a~~i~~~~-~~-------g~~ 98 (554)
T COG0659 33 AVALPLAMAFAIAAG------VPPEAGLYASIVAGIIYALFGGSRGLISGPTGAFAVVLAAVIASLV-ET-------GLA 98 (554)
T ss_pred HHHhHHHHHHHHHcC------CCHHHHHHHHHHHHHHHHHHcCCccceeccchhhHHHHHHHHHHHH-HH-------HHH
Confidence 34568 999988544 6677788999999999999999999999999997774332 22222 33 444
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHhhhhhhhhHHHHHHHHHHHHHHhhhhccccccCCCCCCCchhhhhhhh--hhhH
Q 037025 125 WAGWVCVWTSLVLFLLAIFNACDLINRFTRIAGELFGMLIAVLFLQEATKGMDSEFKIPKAEDSSSEKYQFQWL--YTNG 202 (366)
Q Consensus 125 ~~~wvgiW~~~~~~i~a~~~~s~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~~~~~--~~~~ 202 (366)
..+-..+-++++++++..+-..++++|+.|--=--|-.=|+++-+..-++++... +...+..........+ ....
T Consensus 99 ~~~~~tllaGv~~i~~G~lRLG~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~---~~~~~~~~~~~~~l~~~~~~~~ 175 (554)
T COG0659 99 LAFLATLLAGVFQILLGLLRLGRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGL---ASKVSGFWAKVSALFTVLLTIN 175 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCC---CccccchHHHHHHHHHhccccc
Confidence 5567889999999999999999999999997666677778887777777776542 1111100000000000 0111
Q ss_pred HHHHHHHHHHHHHHHhhccccccccchhchhhHHHHHHHHHhhccCCCCCC-CC-CCccccCCCCCCCCCCCCceeecCC
Q 037025 203 LLGIIFTSGLVCTALKSRKARSWWSFIADYGVPLMVLVWSALSFSVPSKVP-SG-VPRRLFSPLPWESASLDHWSAIKDM 280 (366)
Q Consensus 203 llsliL~~gtf~~a~~~~~~~~~R~~isDfgv~iaI~~~~~~~y~~~~~vp-~~-~~~~l~~p~~~~p~~~r~W~v~~~~ 280 (366)
..++++...+..+-+.++|.+ +++= +..+++++.+.+++.++.+.+ .+ ++..++.+ ...|. .
T Consensus 176 ~~~~~lg~~~l~il~~~~~~~--~~~P---~~liaiv~~t~i~~~~~~~~~~~G~i~~~lp~~-------~~~~~----~ 239 (554)
T COG0659 176 LATLLLGLLTLAILLFLPRLT--PRIP---SPLIALVLGTLIVWIFPLDSLRYGEIPGSLPSG-------LPHFR----L 239 (554)
T ss_pred HHHHHHHHHHHHHHHHccchh--hhCC---cHHHHHHHHHHHHHHhcCCchhcccCcccCCcC-------CCccc----C
Confidence 334455555555444444432 1111 157899999999988776654 22 22222222 12222 2
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHhcCC--------------------------ccccccccCCCCCCCCCCChhhhhh
Q 037025 281 GKVPVAYIFAAFIPAAMIVGLYFFDHS--------------------------TLACGLIGLPPSNGVLPQSPMHTKS 332 (366)
Q Consensus 281 ~~~p~~~i~~A~iPAlll~iLiFmD~~--------------------------~~v~sllGLPw~~aa~p~S~~H~~s 332 (366)
.++++..+..-+.+|+.++++-++|+- |+++|+||==+.+|++.||...++|
T Consensus 240 P~~~~~~~~~l~~~al~la~lg~iesllta~~~~~~~~~~~d~nrELiaqGiaNi~sglfgg~p~~g~~srS~~nv~s 317 (554)
T COG0659 240 PNVSLSLLLALLPYALALALLGLLESLLTAVSFDGMTGTKHDSNRELIAQGIANIASGLFGGIPATGSISRSAINIKS 317 (554)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHhhHHHHHHHHhCCccccchhHHHHHHHHh
Confidence 235555566666668888888888876 9999999977789999998877665
No 5
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=98.22 E-value=9e-05 Score=78.49 Aligned_cols=122 Identities=12% Similarity=0.056 Sum_probs=94.1
Q ss_pred hhhHHHhccCCcccCCCCcchhHHHHhhhhhhHHHHHhcCCceeeeeccchhHHHHHH-HHHHhhccccccchhhhhHHH
Q 037025 49 ALPVIAFGEQPAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTY-LYNFAKDREDLGQKLYLAWAG 127 (366)
Q Consensus 49 l~PaItFG~ll~~~T~~~igv~E~lls~ai~Giifslf~gQPL~Ilg~TGP~~vf~~~-ly~~~~~~~~~~~~~fl~~~~ 127 (366)
+--+++|+.+-+ +...--|.++.+.+++|++||+-|..+.|+|+.+.+.... +-+...+... ..++...-.
T Consensus 29 iP~~~ayA~lag------lpp~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~~v~~~~~~~~~--~~~~~~~a~ 100 (563)
T TIGR00815 29 IPQAMAYAILAG------LSPIYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGSVIARVGLQYLF--DCDAIRLAF 100 (563)
T ss_pred HHHHHHHHHHcC------CCchhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHHHHHHhcCCCCc--ccHHHHHHH
Confidence 333888887653 3334448899999999999999999999999886665433 2233332210 125777888
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHhhhhhhhhHHHHHHHHHHHHHHhhhhcc
Q 037025 128 WVCVWTSLVLFLLAIFNACDLINRFTRIAGELFGMLIAVLFLQEATKGMDS 178 (366)
Q Consensus 128 wvgiW~~~~~~i~a~~~~s~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~ 178 (366)
.+.+-++++.+++..+....+++|+.+-.=.-|..=++++.+..-++++..
T Consensus 101 ~l~~l~Gi~~~~~g~lrlG~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G 151 (563)
T TIGR00815 101 TLTLLAGIFQVILGLLRLGFLIEFLSHAVISGFMTGAAITIGLSQLKGLLG 151 (563)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999888888888899888888888755
No 6
>PRK11660 putative transporter; Provisional
Probab=97.74 E-value=0.0017 Score=68.91 Aligned_cols=110 Identities=16% Similarity=0.179 Sum_probs=83.4
Q ss_pred HHHhccCCcccCCCCcchhHHHHhhhhhhHHHHHhcCCceeeeeccchhHHHHHHHHHHhhccccccchhhhhHHHHHHH
Q 037025 52 VIAFGEQPAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTYLYNFAKDREDLGQKLYLAWAGWVCV 131 (366)
Q Consensus 52 aItFG~ll~~~T~~~igv~E~lls~ai~Giifslf~gQPL~Ilg~TGP~~vf~~~ly~~~~~~~~~~~~~fl~~~~wvgi 131 (366)
+++|+.+-+ +..+--|.++.+++++|++||+-|..+.|+|+.+.+.. ....++.+. . .-....+
T Consensus 47 ~mayA~lag------~pp~~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~~---~~~~~~~~~----~---~~~~~~~ 110 (568)
T PRK11660 47 AMALAIASG------VPPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVIL---YPVSQQFGL----A---GLLVATL 110 (568)
T ss_pred HHHHHHHcC------CChHHHHHHHHHHHHHHHHhcCCCCcccChhHHHHHHH---HHHHHHhhH----H---HHHHHHH
Confidence 777774422 33333499999999999999999999999988876643 344444431 2 2346688
Q ss_pred HHHHHHHHHHHHhhhhHHHhhhhhhhhHHHHHHHHHHHHHHhhhhc
Q 037025 132 WTSLVLFLLAIFNACDLINRFTRIAGELFGMLIAVLFLQEATKGMD 177 (366)
Q Consensus 132 W~~~~~~i~a~~~~s~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~ 177 (366)
.++++.+++..+....+++|+.+-.=.-|..=++++.+..-++++.
T Consensus 111 l~Gii~~l~gllrlG~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~l 156 (568)
T PRK11660 111 MSGIILILMGLARLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDFF 156 (568)
T ss_pred HHHHHHHHHHHHhhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999877777877788877777777664
No 7
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=93.95 E-value=7.7 Score=39.77 Aligned_cols=183 Identities=15% Similarity=0.101 Sum_probs=101.6
Q ss_pred hHHHHHhhhhhHHHhccCCcccCCCCcchhHHHHhhhhhhHHHHHhcCCc---eeeeeccchhHHHHHHHHHHhhccccc
Q 037025 41 TTYIFFASALPVIAFGEQPAKDTDGSLSTVETLSSTALCGIVHSVLGGQP---LLILGVAEPTVLMYTYLYNFAKDREDL 117 (366)
Q Consensus 41 ~~flyFa~l~PaItFG~ll~~~T~~~igv~E~lls~ai~Giifslf~gQP---L~Ilg~TGP~~vf~~~ly~~~~~~~~~ 117 (366)
.+.||-++++|.+..|..+-+.-+-..=++-+++.++++-+++++..++| ..+.|++--. +-..+. .....++
T Consensus 15 ~l~~~~~~i~~p~iv~~~~l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~--i~~~~~-~~~~~~~- 90 (415)
T TIGR00801 15 LLAMFGGTVLVPLLVGLAPLSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAF--VSPMIA-IGSGLGI- 90 (415)
T ss_pred HHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHH--HHHHHH-HHhccCH-
Confidence 56788888999888887663333333445678889999999999999999 6666665211 111111 1122221
Q ss_pred cchhhhhHHHH-HHHHHHHHHHHHHHH---hh-hhHHHhhhhhhhhHHHHHHHHHHHHHHhhhhccccccCCCCCCCchh
Q 037025 118 GQKLYLAWAGW-VCVWTSLVLFLLAIF---NA-CDLINRFTRIAGELFGMLIAVLFLQEATKGMDSEFKIPKAEDSSSEK 192 (366)
Q Consensus 118 ~~~~fl~~~~w-vgiW~~~~~~i~a~~---~~-s~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~ 192 (366)
+ .+| ..++++++..+++.+ .. -.+.|++++-.--...++|.+....-+++.+.-....+. + .+
T Consensus 91 ---~----~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~~~~g~~~~~~--~---~~ 158 (415)
T TIGR00801 91 ---P----AIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVKMAAGGEAAMS--S---AT 158 (415)
T ss_pred ---H----HHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHHHhccCCCccc--c---cc
Confidence 1 122 344445555555443 11 123556666666777778888888888887632211100 0 00
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHH-hhccccccccchhchhhHHHHHHHHHhhccCC
Q 037025 193 YQFQWLYTNGLLGIIFTSGLVCTAL-KSRKARSWWSFIADYGVPLMVLVWSALSFSVP 249 (366)
Q Consensus 193 ~~~~~~~~~~llsliL~~gtf~~a~-~~~~~~~~R~~isDfgv~iaI~~~~~~~y~~~ 249 (366)
+. +.. ++.+.+.++.+.. ..|+. |+++.-+++.+++++.+.+++..+
T Consensus 159 ~~---~~~----~~~vg~~~l~~~vl~~~~~---~g~~~~~aiLigiv~g~i~a~~lg 206 (415)
T TIGR00801 159 YG---SLE----NLGVAFVVLALIILLNRFG---KGFLKSISILIGILVGYILALFMG 206 (415)
T ss_pred cC---chh----hHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHcC
Confidence 00 111 2233333333222 11222 346667799999999888886653
No 8
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=93.14 E-value=5.5 Score=40.53 Aligned_cols=181 Identities=13% Similarity=0.078 Sum_probs=94.5
Q ss_pred hHHHHHhhhhhHHHhccCCcccCC-CCcchhHHHHhhhhhhHHHH----HhcCCceeeeeccchhHHHHHHHHHHhhccc
Q 037025 41 TTYIFFASALPVIAFGEQPAKDTD-GSLSTVETLSSTALCGIVHS----VLGGQPLLILGVAEPTVLMYTYLYNFAKDRE 115 (366)
Q Consensus 41 ~~flyFa~l~PaItFG~ll~~~T~-~~igv~E~lls~ai~Giifs----lf~gQPL~Ilg~TGP~~vf~~~ly~~~~~~~ 115 (366)
.+++|-+++++.+-.+.-++-..+ -..-++-++++++++.++.+ .+++.--.+.|++++.... ++..+++.+
T Consensus 5 ~l~~~~~~i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~---~~~~~~~~~ 81 (406)
T TIGR03173 5 VLAMYAGAVAVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGP---MIAIGAGGG 81 (406)
T ss_pred hHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHH---HHHHhhhhh
Confidence 456777777776666543221111 11234678889999999997 5677888888888855443 444444432
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHhhhhhhhhHHHHHHHHHHHHHHhhhhccccccCCCCCCCchhhhh
Q 037025 116 DLGQKLYLAWAGWVCVWTSLVLFLLAIFNACDLINRFTRIAGELFGMLIAVLFLQEATKGMDSEFKIPKAEDSSSEKYQF 195 (366)
Q Consensus 116 ~~~~~~fl~~~~wvgiW~~~~~~i~a~~~~s~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~~ 195 (366)
++--.-..++++++.++++ .=...+.|+++.-.--.+.++|.+...--+++..... +. +. ++
T Consensus 82 -------~~~~~ga~~v~Gii~illg-~~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~---~~--~~---~~-- 143 (406)
T TIGR03173 82 -------LGAIFGAVIVAGLFVILLA-PFFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGG---AG--AP---DF-- 143 (406)
T ss_pred -------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccC---CC--cc---cc--
Confidence 2233456677777777766 2223344555433333344456665555566544211 00 00 00
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHhhccccccccchhchhhHHHHHHHHHhhccCC
Q 037025 196 QWLYTNGLLGIIFTSGLVCTALKSRKARSWWSFIADYGVPLMVLVWSALSFSVP 249 (366)
Q Consensus 196 ~~~~~~~llsliL~~gtf~~a~~~~~~~~~R~~isDfgv~iaI~~~~~~~y~~~ 249 (366)
.+..+..+++ .++.+.+-.++ ..|+++.-+++.+++++.+.+++..+
T Consensus 144 -~~~~~~~l~l----~~l~~~il~~~--~~~~~~~~~aiLi~ivvg~iva~~~g 190 (406)
T TIGR03173 144 -GSPQNLGLAL----LTLVIILLLNR--FGKGFLRSIAVLLGLVVGTIVAAALG 190 (406)
T ss_pred -cchHHHHHHH----HHHHHHHHHHH--HhhhHHHHhHHHHHHHHHHHHHHHhc
Confidence 0111112222 22211111111 12345566789999999888876553
No 9
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=92.31 E-value=4.9 Score=43.94 Aligned_cols=123 Identities=14% Similarity=0.118 Sum_probs=84.8
Q ss_pred hh-HHHhccCCcccCCCCcchhHHHHhhhhhhHHHHHhcCCceeeeeccchhHHHHHH-HHHHhhcccc-ccchhhhhHH
Q 037025 50 LP-VIAFGEQPAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTY-LYNFAKDRED-LGQKLYLAWA 126 (366)
Q Consensus 50 ~P-aItFG~ll~~~T~~~igv~E~lls~ai~Giifslf~gQPL~Ilg~TGP~~vf~~~-ly~~~~~~~~-~~~~~fl~~~ 126 (366)
.| +|+|+.+-+ .-..--|-|+.++.++|++||-++=.-+|+++=+.+.... +-+.+.+... .....++...
T Consensus 95 VPQ~iaYa~la~------lppiyGLYssf~~~~iY~~fGtsr~isiG~~av~sLmv~~~v~~~v~~~~~~~~~~~~i~va 168 (665)
T KOG0236|consen 95 VPQGLAYALLAG------LPPIYGLYSSFFPPLIYAIFGTSRHVSIGPFAVVSLMVGTVVSQVVLSEAPSNDIATTIQVA 168 (665)
T ss_pred cchHHHHHHHcC------CChHHHHHHHHHHHHHheeccCCCcccccHHHHHHHHHHHHHHHHHhccCCCcCcchhHHHH
Confidence 44 677776654 4455667899999999999999999888877765554432 2244443220 0012567777
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhhhhhhhHHHHHHHHHHHHHHhhhhcc
Q 037025 127 GWVCVWTSLVLFLLAIFNACDLINRFTRIAGELFGMLIAVLFLQEATKGMDS 178 (366)
Q Consensus 127 ~wvgiW~~~~~~i~a~~~~s~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~ 178 (366)
+-+.+-++++-+++..+..-.+++|+.+-.=--|..=.|+.-+..-+|.+..
T Consensus 169 ~~lt~l~Giiq~~mG~lrLGfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llG 220 (665)
T KOG0236|consen 169 TTLTFLTGIIQLILGLLRLGFLVRFLSEPALSGFTTGAALHIVTSQLKVLLG 220 (665)
T ss_pred HHHHHHHHHHHHHHHHHhcChHHHHccHHHHhHhhhhhhhhhhHHhhHhhcc
Confidence 8899999999999999999999999996444444444555555566666654
No 10
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=90.75 E-value=23 Score=36.80 Aligned_cols=187 Identities=16% Similarity=0.115 Sum_probs=104.6
Q ss_pred hHHHHHhhhhhHHHhccCCcccCCC-CcchhHHHHhhhhhhHHHHHhcCCceeeeeccchhHHHHHHHHHHhhccccccc
Q 037025 41 TTYIFFASALPVIAFGEQPAKDTDG-SLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTYLYNFAKDREDLGQ 119 (366)
Q Consensus 41 ~~flyFa~l~PaItFG~ll~~~T~~-~igv~E~lls~ai~Giifslf~gQPL~Ilg~TGP~~vf~~~ly~~~~~~~~~~~ 119 (366)
.++||-.+++|.+..+..++-..+. ..=++-+++.++++.++.++++..=.++.|+|+ .|...+..+|......|.
T Consensus 18 vl~m~~~~i~vPliva~a~gl~~~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~Sf---~~~~~~~~i~~~~~~~g~ 94 (433)
T PRK11412 18 FFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGG---LWWGTILTITLGEASRGT 94 (433)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCch---HHHHHHHHHHhcccccCc
Confidence 6788888999988888765533222 233567788999999999999777777777776 444455555642211110
Q ss_pred hhh-hhHH--HHHHHHHHHHHHHHHHHh-hhhHHHhhhhhhhhHHHHHHHHHHHHHHhhhhccc-cccCCCCCCCchhhh
Q 037025 120 KLY-LAWA--GWVCVWTSLVLFLLAIFN-ACDLINRFTRIAGELFGMLIAVLFLQEATKGMDSE-FKIPKAEDSSSEKYQ 194 (366)
Q Consensus 120 ~~f-l~~~--~wvgiW~~~~~~i~a~~~-~s~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~-f~~~~~~~~~~~~~~ 194 (366)
++ --+. .+--+=.+++.++++.++ ...+.|++|--.-=..=++|.+-.+--+++.+... +.. .++ +.
T Consensus 95 -~~~~~~g~l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~~~--~~~-----~~ 166 (433)
T PRK11412 95 -PINDIATSLAVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPFGI--ADP-----NG 166 (433)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCccC--ccc-----cc
Confidence 11 1111 223344455566666555 34455566655555666777777777888766431 110 000 00
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHhhccccccccchhchhhHHHHHHHHHhh
Q 037025 195 FQWLYTNGLLGIIFTSGLVCTALKSRKARSWWSFIADYGVPLMVLVWSALS 245 (366)
Q Consensus 195 ~~~~~~~~llsliL~~gtf~~a~~~~~~~~~R~~isDfgv~iaI~~~~~~~ 245 (366)
+++..+ +.+.+.|+.+.+.... ..|+++.-|++.+++++-..+.
T Consensus 167 -~~~~~~----~~~a~~~l~~il~~~~--~~~g~~~~~svLiGiv~G~v~a 210 (433)
T PRK11412 167 -KIQLPP----FGLSVAVMCLVLAMII--FLPQRIARYSLLVGTIVGWILW 210 (433)
T ss_pred -ccchHH----HHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHHH
Confidence 011112 2223333222221111 1266888899999998877663
No 11
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=88.01 E-value=35 Score=35.23 Aligned_cols=169 Identities=13% Similarity=0.091 Sum_probs=88.6
Q ss_pred chhHHHHHhhhhhHHHhccCCcccCCCCcchhHHHHhhhhhhHHHHHh--cCCceeeeeccchhHHHHHHHHHHhhcccc
Q 037025 39 APTTYIFFASALPVIAFGEQPAKDTDGSLSTVETLSSTALCGIVHSVL--GGQPLLILGVAEPTVLMYTYLYNFAKDRED 116 (366)
Q Consensus 39 as~~flyFa~l~PaItFG~ll~~~T~~~igv~E~lls~ai~Giifslf--~gQPL~Ilg~TGP~~vf~~~ly~~~~~~~~ 116 (366)
.-.+.||-..++|.+-.| ++..++++.++++-+++++. ++-|+.. |++ -.|...+-..+...+
T Consensus 38 Qh~lam~~~~v~~Plilg----------l~~~~tl~~sGi~TllQ~~~~G~rlP~v~-G~s---f~f~~~~~~~~~~~~- 102 (429)
T TIGR03616 38 QHAVAMFGATVLMPLLMG----------FDPNLTILMSGIGTLLFFLITGGRVPSYL-GSS---AAFVGAVIAATGYNG- 102 (429)
T ss_pred HHHHHHHHHHHHHHHHhC----------CCHhHHHHHHHHHHHHHHHHhCCCceeEE-cCc---HHHHHHHHHHHhhcc-
Confidence 346677777677766654 22237899999999999865 5666644 544 344444433321110
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHhhhh-hhhhH---HHHHHHHHHHHHHhhhhccccccCCCCCCCchh
Q 037025 117 LGQKLYLAWAGWVCVWTSLVLFLLAIFNACDLINRFTR-IAGEL---FGMLIAVLFLQEATKGMDSEFKIPKAEDSSSEK 192 (366)
Q Consensus 117 ~~~~~fl~~~~wvgiW~~~~~~i~a~~~~s~lv~y~TR-FTeEi---F~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~ 192 (366)
.+..++++...-..+-++++.++++.+......+++.| |+..+ ..++|.+-.+.-+++..... +
T Consensus 103 ~~~~~~~~~a~ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~vg~~~~~~~-------~----- 170 (429)
T TIGR03616 103 QGTNPNIALALGGIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSAS-------G----- 170 (429)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhcccc-------c-----
Confidence 01123556555666667777777776643323344433 23333 34455554455555532110 0
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHhhccccccccchhchhhHHHHHHHHHhhcc
Q 037025 193 YQFQWLYTNGLLGIIFTSGLVCTALKSRKARSWWSFIADYGVPLMVLVWSALSFS 247 (366)
Q Consensus 193 ~~~~~~~~~~llsliL~~gtf~~a~~~~~~~~~R~~isDfgv~iaI~~~~~~~y~ 247 (366)
+ +...++.+++.. .....+. |.++..+++.+++++.+.+++.
T Consensus 171 ~----~~~~al~tl~~i---~l~~l~~------~~~l~~~avLiGivvG~iva~~ 212 (429)
T TIGR03616 171 F----DSWMAVLTILCI---GAVAVFT------RGMLQRLLILVGLIAAYLAYFI 212 (429)
T ss_pred c----ccHHHHHHHHHH---HHHHHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 0 011233332221 1122222 4566777999999888877543
No 12
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=86.82 E-value=30 Score=35.03 Aligned_cols=188 Identities=11% Similarity=0.073 Sum_probs=94.5
Q ss_pred hHHHHHhhhhhHHHhccCCc--ccCCCCcchhHHHHhhhhhhHHHHHhcCCceeeeeccchhHHHHHHHHHHhhcccccc
Q 037025 41 TTYIFFASALPVIAFGEQPA--KDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTYLYNFAKDREDLG 118 (366)
Q Consensus 41 ~~flyFa~l~PaItFG~ll~--~~T~~~igv~E~lls~ai~Giifslf~gQPL~Ilg~TGP~~vf~~~ly~~~~~~~~~~ 118 (366)
++.++-..+.+.+..+..++ +.+. .=++-+++.++++-+++++..|-|+.+.-..+-..+. .+........ .
T Consensus 11 ~l~m~~~~iv~P~il~~~~g~~~~~~--~li~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~~~~---~~~~~~g~~~-~ 84 (389)
T PF00860_consen 11 FLAMFYIIIVVPLILAAAFGLDADTA--ALISATFLVSGIATLLQGLPAGHRLPLVPGPSFAFIF---AFMIVIGMAE-S 84 (389)
T ss_dssp HHHHHHHHHHHHHTTTS-------------HHHHHHHHHHHHHHHHHHTTT-----EEE-GGGHH---HHHGGG------
T ss_pred HHHHHHHHHHhHHHHhhcccccchhh--HHHHHHHHHHHHHHHHHHhcCCCceecccccchhhhh---hhhccccccc-c
Confidence 44455445555555554433 3333 3457888999999999999888888876544444443 2222222100 0
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHhhh-hHHHhhhhhhhhHHHHHHHHHHHHHHhhhhccccccCCCCCCCchhhhhhh
Q 037025 119 QKLYLAWAGWVCVWTSLVLFLLAIFNAC-DLINRFTRIAGELFGMLIAVLFLQEATKGMDSEFKIPKAEDSSSEKYQFQW 197 (366)
Q Consensus 119 ~~~fl~~~~wvgiW~~~~~~i~a~~~~s-~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~~~~ 197 (366)
...=++.-.=..+..+++.++++.++.- .+.|+++.-.-....++|.+-....+++.+...-..+ +.. .+ .
T Consensus 85 ~~~~~~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~~---~~~--~~---~ 156 (389)
T PF00860_consen 85 GGYGLQAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGNP---DGL--LV---G 156 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS---B---TT---B-----
T ss_pred hhhchhhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEeeehhhhhhhHhhccccccccc---ccc--cc---c
Confidence 0011122223557788888888888885 6778888877888888999988889988775432110 110 00 0
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhccccccccchhchhhHHHHHHHHHhhccC
Q 037025 198 LYTNGLLGIIFTSGLVCTALKSRKARSWWSFIADYGVPLMVLVWSALSFSV 248 (366)
Q Consensus 198 ~~~~~llsliL~~gtf~~a~~~~~~~~~R~~isDfgv~iaI~~~~~~~y~~ 248 (366)
...+...+++.+........+ .|+...-+++.+++++-+.+++..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ailigi~~g~i~~~~~ 201 (389)
T PF00860_consen 157 DGKNLGLAVLTLLFILLLSLF------LKGFLRKGAILIGIIAGWIVAAIL 201 (389)
T ss_dssp -HHHHHHHHHHHHHHHHHHHS------SSTTTTTHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccchhhhhhhhh------hhhhcccccchhhhhhhhhhhhcc
Confidence 111112222222211111112 244455788889998888777554
No 13
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=84.21 E-value=58 Score=34.12 Aligned_cols=231 Identities=12% Similarity=0.050 Sum_probs=125.6
Q ss_pred hHHHHHhhhhhHHHhccCCccc-CCCCcchhHHHHhhhhhhHHHHHhcC----CceeeeeccchhHHHHHHHHHHhhccc
Q 037025 41 TTYIFFASALPVIAFGEQPAKD-TDGSLSTVETLSSTALCGIVHSVLGG----QPLLILGVAEPTVLMYTYLYNFAKDRE 115 (366)
Q Consensus 41 ~~flyFa~l~PaItFG~ll~~~-T~~~igv~E~lls~ai~Giifslf~g----QPL~Ilg~TGP~~vf~~~ly~~~~~~~ 115 (366)
.+.||-+.+++.+.-|..++-. .+-.+=++-.++.++++-+++++-.+ |=..++|++- .|...+-...++.+
T Consensus 26 ~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sF---afi~p~i~~~~~~g 102 (451)
T COG2233 26 LLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSF---AFVAPMIAIGGTTG 102 (451)
T ss_pred HHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechH---HHHHHHHHHHhccC
Confidence 7899999999999999776543 22333456779999999999998433 6667777753 44444444444432
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHhhh-hHHHhhhhhhhhHHHHHHHHHHHHHHhhhhccccccCCCCCCCchhhh
Q 037025 116 DLGQKLYLAWAGWVCVWTSLVLFLLAIFNAC-DLINRFTRIAGELFGMLIAVLFLQEATKGMDSEFKIPKAEDSSSEKYQ 194 (366)
Q Consensus 116 ~~~~~~fl~~~~wvgiW~~~~~~i~a~~~~s-~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~ 194 (366)
. =+ --...|+-.+.++.++.+.=.. ++.|.++-----..-++|.+-.+.-|++........ .++. ++
T Consensus 103 ~-----~~-~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~G~~~~----~~~~-~~- 170 (451)
T COG2233 103 D-----GI-AALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVVLVIGLSLAPVAINMAGGGPGA----AGNP-DF- 170 (451)
T ss_pred C-----ch-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEeeeehhhhHHHHHHHhhCCCCC----CCCc-cc-
Confidence 0 01 1123455555555544444444 555665554444555566666666666655432210 0000 00
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHhhccccccccchhchhhHHHHHHHHHhhccCCCCCCCCCCccccCCCCCCCCCCCCc
Q 037025 195 FQWLYTNGLLGIIFTSGLVCTALKSRKARSWWSFIADYGVPLMVLVWSALSFSVPSKVPSGVPRRLFSPLPWESASLDHW 274 (366)
Q Consensus 195 ~~~~~~~~llsliL~~gtf~~a~~~~~~~~~R~~isDfgv~iaI~~~~~~~y~~~~~vp~~~~~~l~~p~~~~p~~~r~W 274 (366)
.+ .-.+.+++.|+.+.+-..++ .|.+++-+++.+++++-..+.++.+ .+.- ++-....|
T Consensus 171 --~~----~~~l~la~~tl~~il~~~~f--~~g~~~~i~ILiGlv~G~~la~~~G-~vdf------------~~v~~a~w 229 (451)
T COG2233 171 --GS----LENLGLALVTLLIILLINRF--GKGFLRRIPILIGLVVGYLLALFMG-MVDF------------SGVAEAPW 229 (451)
T ss_pred --Cc----hhHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHHHHhC-CcCc------------cccccCce
Confidence 01 22344445554433222111 1566777788888888888877664 2211 11112346
Q ss_pred eeecCCCCccHHHHHHHHHHHHHHHHHHHhcCC
Q 037025 275 SAIKDMGKVPVAYIFAAFIPAAMIVGLYFFDHS 307 (366)
Q Consensus 275 ~v~~~~~~~p~~~i~~A~iPAlll~iLiFmD~~ 307 (366)
+.++.....-...-+.|+++.+++++.-..||-
T Consensus 230 ~~~P~~~~fg~~F~~~ail~m~~v~iV~~~E~~ 262 (451)
T COG2233 230 FALPTPFYFGMAFDWGAILTMLPVAIVTIVEHT 262 (451)
T ss_pred eeCCcccCCCeeecHHHHHHHHHHHHHHHHHHh
Confidence 544432211011124567777777777788876
No 14
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=80.56 E-value=7.3 Score=37.02 Aligned_cols=36 Identities=17% Similarity=0.033 Sum_probs=27.2
Q ss_pred HhhhhHHHhhhhhhhhHHHHHHHHHHHHHHhhhhcc
Q 037025 143 FNACDLINRFTRIAGELFGMLIAVLFLQEATKGMDS 178 (366)
Q Consensus 143 ~~~s~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~ 178 (366)
+...++++|+.+-.=.-|..=++++.+...++.+..
T Consensus 4 lrlG~l~~~ip~pVi~Gf~~g~ai~I~~~Ql~~~~G 39 (280)
T PF00916_consen 4 LRLGFLVRFIPRPVISGFLAGIAILIIFSQLPNLLG 39 (280)
T ss_pred ccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345667788887777777777888888888887765
No 15
>PRK10720 uracil transporter; Provisional
Probab=62.37 E-value=2e+02 Score=29.76 Aligned_cols=112 Identities=13% Similarity=0.020 Sum_probs=63.3
Q ss_pred hHHHHHhhhhhHHHhccCCcccCCCCcchhHHHHhhhhhhHHHHHhcC-CceeeeeccchhHHHHHHHHHHhhccccccc
Q 037025 41 TTYIFFASALPVIAFGEQPAKDTDGSLSTVETLSSTALCGIVHSVLGG-QPLLILGVAEPTVLMYTYLYNFAKDREDLGQ 119 (366)
Q Consensus 41 ~~flyFa~l~PaItFG~ll~~~T~~~igv~E~lls~ai~Giifslf~g-QPL~Ilg~TGP~~vf~~~ly~~~~~~~~~~~ 119 (366)
.+.||-++++|.+-+| ++..+.++.++++-++++...| .=-.+.|+ .-.|...+-.... .++
T Consensus 24 vl~m~~~~i~~Pli~g----------l~~~~~l~~sGi~TliQ~~~~g~rlP~~~G~---sfa~i~~~~~~~~-~~~--- 86 (428)
T PRK10720 24 LFAMFGATVLVPILFH----------INPATVLLFNGIGTLLYLFICKGKIPAYLGS---SFAFISPVLLLLP-LGY--- 86 (428)
T ss_pred HHHHHHHHHHHHhhcC----------CCHHHHHHHHHHHHHHHHHhccCccceEEeC---cHHHHHHHHHHHH-ccH---
Confidence 6678889999988774 3345689999999999998775 32234443 3344333333332 121
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHh----hhhHHHhhhhhhhhHHHHHHHHHHHHHHh
Q 037025 120 KLYLAWAGWVCVWTSLVLFLLAIFN----ACDLINRFTRIAGELFGMLIAVLFLQEAT 173 (366)
Q Consensus 120 ~~fl~~~~wvgiW~~~~~~i~a~~~----~s~lv~y~TRFTeEiF~~lIs~iFi~eai 173 (366)
+.. .=.-++++++.++++.+- ...+.|+++.-.--.|-++|.+--.--++
T Consensus 87 -~~~---lgav~v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L~~~~~ 140 (428)
T PRK10720 87 -EVA---LGGFIMCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAA 140 (428)
T ss_pred -HHH---HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHhHHHHH
Confidence 221 124456666666666652 22345566654444444455544443333
No 16
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=57.77 E-value=6.3 Score=31.60 Aligned_cols=49 Identities=16% Similarity=0.352 Sum_probs=38.7
Q ss_pred hhh-HHHhccCCcccCCCCcchhHHHHhhhhhhHHHHHhcCCceeeeeccchhHHH
Q 037025 49 ALP-VIAFGEQPAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLM 103 (366)
Q Consensus 49 l~P-aItFG~ll~~~T~~~igv~E~lls~ai~Giifslf~gQPL~Ilg~TGP~~vf 103 (366)
..| +++|+.+-+ +...--|.++.+++++|++|++-|..++|+|+-+.+.
T Consensus 30 ~iPq~~a~A~lAg------~pp~~GLy~a~~~~liyalfG~s~~~~~Gp~a~~s~l 79 (84)
T PF13792_consen 30 AIPQGMAYALLAG------VPPIYGLYAAIIPPLIYALFGSSRHMIVGPTAAMSLL 79 (84)
T ss_pred HHHHHHHHHHHcC------CCCCeeeHHHHHHHHHHhhccCCCccccChHHHHHHH
Confidence 456 888886544 3334447889999999999999999999999887664
No 17
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=35.34 E-value=74 Score=32.77 Aligned_cols=114 Identities=12% Similarity=0.209 Sum_probs=79.2
Q ss_pred hhHHHhccCCcccCCCCcchhHHHHhhhhhhHHHHHhcCCceeeeeccchhHHHHHHHHHHhhccccccchhhhhHHHHH
Q 037025 50 LPVIAFGEQPAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTYLYNFAKDREDLGQKLYLAWAGWV 129 (366)
Q Consensus 50 ~PaItFG~ll~~~T~~~igv~E~lls~ai~Giifslf~gQPL~Ilg~TGP~~vf~~~ly~~~~~~~~~~~~~fl~~~~wv 129 (366)
+|.++=-...+++. -+.+.+..++++.++-+.|+|-+..+=+.|. .+|...+ ++.| ..=|-+-
T Consensus 241 lpgiavl~aaGy~~----p~~~~~~~tGl~sll~ApfGg~~~nlaaita----------Aic~G~~--ah~d-~~rR~~a 303 (395)
T TIGR00843 241 APGIAALKAAGYNA----PAKPIIAAAGLAALFAAFAGGISIGIAAITA----------AICMGKD--AHED-KDKRWIA 303 (395)
T ss_pred chHHHHHHHcCCCC----CchHHHHHHHHHHHHHhccCCchhhhhHHhH----------HHhcCcc--cccC-cCccchH
Confidence 34444444444444 4799999999999999999999987776553 3455542 2223 5566788
Q ss_pred HHHHHHHHHHHHHHhhhhHHHhhhhhhhhHHHHHHHHHHHHHHhhhhccccc
Q 037025 130 CVWTSLVLFLLAIFNACDLINRFTRIAGELFGMLIAVLFLQEATKGMDSEFK 181 (366)
Q Consensus 130 giW~~~~~~i~a~~~~s~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~ 181 (366)
+++++++.+++..+.+ .++.-+.-+..|+-+.+-.+..+--=...+..-++
T Consensus 304 ~i~~Gv~yll~glfag-~i~~l~~~~P~~li~~laGlAll~~~~~~l~~a~~ 354 (395)
T TIGR00843 304 AAAAGIFYLLAGLFAG-AITALFAALPKELIAALAGLALLGAIAGNIKIALH 354 (395)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999998877 77778888999988887776654333333433443
No 18
>PF13172 PepSY_TM_1: PepSY-associated TM helix
Probab=30.13 E-value=85 Score=20.47 Aligned_cols=24 Identities=25% Similarity=0.427 Sum_probs=19.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhh
Q 037025 123 LAWAGWVCVWTSLVLFLLAIFNAC 146 (366)
Q Consensus 123 l~~~~wvgiW~~~~~~i~a~~~~s 146 (366)
..+.-|+|+++++++++++++++-
T Consensus 6 ~~~H~~~g~~~~~~ll~~~lTG~~ 29 (34)
T PF13172_consen 6 RKIHRWLGLIAAIFLLLLALTGAL 29 (34)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345669999999999999998863
No 19
>PF10660 MitoNEET_N: Iron-containing outer mitochondrial membrane protein N-terminus ; InterPro: IPR019610 The CDGSH iron sulphur domain are a group of iron-sulphur (Fe-S) clusters and a unique 39 amino acid CDGSH domain [C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H]. The CDGSH iron sulphur domain protein (also referred to as mitoNEET) is an integral membrane protein located in the outer mitochondrial membrane and whose function may be to transport iron into the mitochondria []. Iron in turn is essential for the function of several mitochondrial enzymes. This entry represents the N-terminal of the mitoNEET and Miner-type proteins that carry a CDGSH-type cluster-binding domain (IPR018967 from INTERPRO) that coordinate a redox-active 2Fe-2S cluster. In the outer mitochondrian membrane (OMM), the CDGSH 2Fe-2S-containing domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by the N-terminal domain found in higher vertebrates [, , ]. The whole protein regulates oxidative capacity and may function in electron transfer, for instance in redox reactions with metabolic intermediates, cofactors and/or proteins localized at the OMM.; GO: 0051537 2 iron, 2 sulfur cluster binding, 0043231 intracellular membrane-bounded organelle; PDB: 2R13_A 3REE_A 2QD0_B.
Probab=29.46 E-value=18 Score=27.72 Aligned_cols=27 Identities=22% Similarity=0.208 Sum_probs=0.0
Q ss_pred HhhccCCCCCCCCCCccccCCCCCCCCCCCCce
Q 037025 243 ALSFSVPSKVPSGVPRRLFSPLPWESASLDHWS 275 (366)
Q Consensus 243 ~~~y~~~~~vp~~~~~~l~~p~~~~p~~~r~W~ 275 (366)
.++.+.+.++|+... .+++|+.+ .||+
T Consensus 3 ~is~~vk~~lP~YL~-~lPiP~s~-----gg~f 29 (64)
T PF10660_consen 3 AISKLVKVSLPNYLK-SLPIPDSF-----GGFF 29 (64)
T ss_dssp ---------------------------------
T ss_pred ccccccccccccccc-cccccccc-----cccc
Confidence 345566667776432 36777754 6776
No 20
>PF10337 DUF2422: Protein of unknown function (DUF2422); InterPro: IPR018823 This domain is found in proteins conserved in fungi. Their function is not known. This entry represents the N-terminal half of some member proteins which contain IPR018820 from INTERPRO at their C terminus.
Probab=26.11 E-value=3.8e+02 Score=27.68 Aligned_cols=17 Identities=24% Similarity=0.837 Sum_probs=13.9
Q ss_pred hHHHHHHHHHHHHHHHH
Q 037025 124 AWAGWVCVWTSLVLFLL 140 (366)
Q Consensus 124 ~~~~wvgiW~~~~~~i~ 140 (366)
-+|+|+..|.++++.+.
T Consensus 19 ~~k~~i~~~i~~~l~~i 35 (459)
T PF10337_consen 19 MFKCWIAPWIALILCQI 35 (459)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 48999999999888744
No 21
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=23.48 E-value=79 Score=29.90 Aligned_cols=100 Identities=18% Similarity=0.205 Sum_probs=64.2
Q ss_pred cccchhHHHHHhhhhhHHHhccCCcccCCCCcchhHHHHhhhhhhHHHHHhcCCceeeeeccchhHHHHHHHHHHhhccc
Q 037025 36 GMMAPTTYIFFASALPVIAFGEQPAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLILGVAEPTVLMYTYLYNFAKDRE 115 (366)
Q Consensus 36 ~~las~~flyFa~l~PaItFG~ll~~~T~~~igv~E~lls~ai~Giifslf~gQPL~Ilg~TGP~~vf~~~ly~~~~~~~ 115 (366)
+.+...+=+-+.+..=.+.-....+++++..+..++-+++++++.++-++|+|-|-+=--+ = +.+..-|-.+.
T Consensus 148 ~~~~~a~~ia~v~~~~s~~~~~~~~~~~~~~~d~n~El~a~G~aNi~s~~~gg~p~~~s~s--r-----s~~~~~~Ga~t 220 (280)
T PF00916_consen 148 DLLPTALAIAIVGFIESLLIAKSIAKKTGYRIDPNQELIALGLANIVSGLFGGMPGSGSFS--R-----SAVNYRAGART 220 (280)
T ss_pred ccchhHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHhhhccccchhhcccccccccc--c-----chHHHhcCcce
Confidence 3445555555555666666666677788888899999999999999999999998653211 0 11111122221
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHhhhh
Q 037025 116 DLGQKLYLAWAGWVCVWTSLVLFLLAIFNACDLINRFTR 154 (366)
Q Consensus 116 ~~~~~~fl~~~~wvgiW~~~~~~i~a~~~~s~lv~y~TR 154 (366)
-+.|+.+++++++...+.+ .+++|+=+
T Consensus 221 -----------~~s~~~~~~~~l~~l~~~~-~~l~~iP~ 247 (280)
T PF00916_consen 221 -----------RLSGLISALFVLLVLLFLA-PLLAYIPK 247 (280)
T ss_pred -----------eehhHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 1678888887766555554 35566553
No 22
>PF12841 YvrJ: YvrJ protein family; InterPro: IPR024419 This entry is represents a family of uncharacterised protein. The function of the Bacillus subtilis YvrJ protein is not known, but its expression is regulated by the cell envelope stress-inducible sigma factor YvrI [].
Probab=22.15 E-value=59 Score=22.31 Aligned_cols=19 Identities=21% Similarity=0.571 Sum_probs=15.1
Q ss_pred cchhchhhHHHHHHHHHhh
Q 037025 227 SFIADYGVPLMVLVWSALS 245 (366)
Q Consensus 227 ~~isDfgv~iaI~~~~~~~ 245 (366)
++|+|+|.||+|.+.-++-
T Consensus 1 ~~I~n~GFPi~va~yLL~R 19 (38)
T PF12841_consen 1 QLISNVGFPIAVAIYLLVR 19 (38)
T ss_pred CchhhcCcHHHHHHHHHHH
Confidence 4689999999998776553
Done!