Query 037025
Match_columns 366
No_of_seqs 121 out of 568
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 13:01:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037025.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037025hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1bzk_A Protein (BAND 3 anion t 99.8 3.6E-21 1.2E-25 133.7 0.3 43 18-62 1-43 (43)
2 1bnx_A Protein (BAND 3); human 99.6 8.8E-17 3E-21 105.9 2.5 34 18-62 1-34 (34)
3 1btq_A BAND 3 anion transport 99.1 1.9E-11 6.6E-16 75.6 1.3 26 36-61 1-26 (26)
4 1bts_A BAND 3 anion transport 99.0 1.4E-10 4.8E-15 71.9 2.6 26 67-92 1-26 (26)
5 3qe7_A Uracil permease; uracil 67.2 1E+02 0.0034 30.4 17.3 170 40-248 24-199 (429)
6 2l8s_A Integrin alpha-1; trans 35.5 40 0.0014 23.9 3.7 21 282-302 6-26 (54)
7 2knc_A Integrin alpha-IIB; tra 34.0 43 0.0015 23.7 3.7 21 282-302 9-29 (54)
8 2k1a_A Integrin alpha-IIB; sin 33.8 48 0.0017 22.2 3.7 21 282-302 7-27 (42)
9 4b19_A PEPA1; toxin, toxin apo 14.1 51 0.0018 20.6 0.6 15 73-87 7-21 (30)
10 2lcn_A WALP19-P10 peptide; pro 12.3 1.6E+02 0.0055 17.2 2.4 16 286-301 3-18 (26)
No 1
>1bzk_A Protein (BAND 3 anion transport protein); human erythrocyte anion transporter, transmembrane, synthetic peptide; NMR {Synthetic} SCOP: j.35.1.1
Probab=99.80 E-value=3.6e-21 Score=133.69 Aligned_cols=43 Identities=28% Similarity=0.495 Sum_probs=40.7
Q ss_pred hhccccccchhhhhhcCCcccchhHHHHHhhhhhHHHhccCCccc
Q 037025 18 GRALYYKQDWISCIRSGFGMMAPTTYIFFASALPVIAFGEQPAKD 62 (366)
Q Consensus 18 rR~p~Y~SD~~Dg~~~~~~~las~~flyFa~l~PaItFG~ll~~~ 62 (366)
||+|+|+|||+||+| .||+++++||||||++|+||||++|+++
T Consensus 1 rR~p~Y~SD~~dg~~--~~~laa~~fiyFa~l~PaIaFG~ll~~~ 43 (43)
T 1bzk_A 1 XRYPYYLSDITDAFS--PQVLAAVIFIYFAALSPAITFGGLLGEK 43 (43)
T ss_dssp -CCSTTHHHHTTSSC--SHHHHHHHHHHHHTSTTTTTSSCCCCCC
T ss_pred CCCcccHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 799999999999999 7999999999999999999999999875
No 2
>1bnx_A Protein (BAND 3); human erythrocyte anion transporter, transmembrane, synthetic peptide, electron transport; NMR {Synthetic} SCOP: j.35.1.1
Probab=99.62 E-value=8.8e-17 Score=105.89 Aligned_cols=34 Identities=32% Similarity=0.590 Sum_probs=31.7
Q ss_pred hhccccccchhhhhhcCCcccchhHHHHHhhhhhHHHhccCCccc
Q 037025 18 GRALYYKQDWISCIRSGFGMMAPTTYIFFASALPVIAFGEQPAKD 62 (366)
Q Consensus 18 rR~p~Y~SD~~Dg~~~~~~~las~~flyFa~l~PaItFG~ll~~~ 62 (366)
||+|+|+|||+| ++||||||++|+||||++|+++
T Consensus 1 rR~p~Y~SD~~d-----------~~fiyFa~l~PaIaFg~ll~~~ 34 (34)
T 1bnx_A 1 XRYPYYLSDITD-----------VIFIYFAALSPAITFGGLLGEK 34 (34)
T ss_dssp -CCSTTTHHHHH-----------HHHHHHHHHHHHHHSSCSSCCC
T ss_pred CCCcccHHHHHH-----------HHHHHHHHHHHHHHHHHHHccC
Confidence 799999999999 8999999999999999999875
No 3
>1btq_A BAND 3 anion transport protein; NMR {} SCOP: j.35.1.1 PDB: 1btr_A
Probab=99.09 E-value=1.9e-11 Score=75.58 Aligned_cols=26 Identities=31% Similarity=0.683 Sum_probs=24.7
Q ss_pred cccchhHHHHHhhhhhHHHhccCCcc
Q 037025 36 GMMAPTTYIFFASALPVIAFGEQPAK 61 (366)
Q Consensus 36 ~~las~~flyFa~l~PaItFG~ll~~ 61 (366)
||+++++||||||++|+||||++|++
T Consensus 1 q~laa~~FlyFa~l~paIaFGgLl~~ 26 (26)
T 1btq_A 1 XVLAAVIFIYFAALSPAITFGXXXXX 26 (26)
T ss_pred ChHHHHHHHHHHHHcchhccccccCC
Confidence 69999999999999999999999985
No 4
>1bts_A BAND 3 anion transport protein; transmembrane protein; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 1btt_A
Probab=99.00 E-value=1.4e-10 Score=71.86 Aligned_cols=26 Identities=35% Similarity=0.470 Sum_probs=20.8
Q ss_pred cchhHHHHhhhhhhHHHHHhcCCcee
Q 037025 67 LSTVETLSSTALCGIVHSVLGGQPLL 92 (366)
Q Consensus 67 igv~E~lls~ai~Giifslf~gQPL~ 92 (366)
+||+|+|+|++++|++|++||||||+
T Consensus 1 ~gv~E~i~s~ai~Gi~f~lf~gQPL~ 26 (26)
T 1bts_A 1 XGVSELLISTAVQGILFALLGAXXXX 26 (26)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTC----
T ss_pred CchhHHHHHHHHHHHHHHHHhcccCC
Confidence 68999999999999999999999985
No 5
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli}
Probab=67.18 E-value=1e+02 Score=30.42 Aligned_cols=170 Identities=15% Similarity=0.044 Sum_probs=91.8
Q ss_pred hhHHHHHhhhhhHHHhccCCcccCCCCcchhHHHHhhhhhhHHHHHhcCCceee-eeccchhHHHHHHHHHHhhcccccc
Q 037025 40 PTTYIFFASALPVIAFGEQPAKDTDGSLSTVETLSSTALCGIVHSVLGGQPLLI-LGVAEPTVLMYTYLYNFAKDREDLG 118 (366)
Q Consensus 40 s~~flyFa~l~PaItFG~ll~~~T~~~igv~E~lls~ai~Giifslf~gQPL~I-lg~TGP~~vf~~~ly~~~~~~~~~~ 118 (366)
..+-||-+.+++.+..| +.....++.++++.+++++++|-|+-+ +|++.- |...+....+ +++
T Consensus 24 h~lam~~~~v~~PlilG----------l~~~~~l~~agi~Tllq~~~~~~~lP~~~G~sfa---fi~~~~~i~~-~g~-- 87 (429)
T 3qe7_A 24 HLFAMFGATVLVPVLFH----------INPATVLLFNGIGTLLYLFICKGKIPAYLGSSFA---FISPVLLLLP-LGY-- 87 (429)
T ss_dssp HHHHHHHHHHHHHHTTT----------SCHHHHHHHHHHHHHHHHHHTTTCCCCCEEECGG---GHHHHHHHGG-GCH--
T ss_pred HHHHHHHHHHHhHHHhC----------CCHHHHHHHHHHHHHHHHHHcCCCCCeEecChHH---HHHHHHHHHh-cCH--
Confidence 45566666666655543 234579999999999999999989876 787743 3333333333 331
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHH--hh--hhHHHhhhhhhhhHHHHHHHHHHHHHHhhhhccccccCCCCCCCchhhh
Q 037025 119 QKLYLAWAGWVCVWTSLVLFLLAIF--NA--CDLINRFTRIAGELFGMLIAVLFLQEATKGMDSEFKIPKAEDSSSEKYQ 194 (366)
Q Consensus 119 ~~~fl~~~~wvgiW~~~~~~i~a~~--~~--s~lv~y~TRFTeEiF~~lIs~iFi~eai~~l~~~f~~~~~~~~~~~~~~ 194 (366)
+.. .=..+.++++.++++.+ .. ..+.|++..-.--.|-++|.+.-+--+++..- ...... + +
T Consensus 88 --~~~---~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl~l~~~~~~~~~--~~~~~~-~-----~- 153 (429)
T 3qe7_A 88 --EVA---LGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAG--LLPAEG-Q-----T- 153 (429)
T ss_dssp --HHH---HHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHT--SSCBTT-B-----C-
T ss_pred --HHH---HHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHHHHHHHHHHhcc--ccCCCC-c-----c-
Confidence 222 12345556666666665 32 35778887644444555555555555554321 000000 0 0
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHH-hhccccccccchhchhhHHHHHHHHHhhccC
Q 037025 195 FQWLYTNGLLGIIFTSGLVCTAL-KSRKARSWWSFIADYGVPLMVLVWSALSFSV 248 (366)
Q Consensus 195 ~~~~~~~~llsliL~~gtf~~a~-~~~~~~~~R~~isDfgv~iaI~~~~~~~y~~ 248 (366)
.+.. .+.+.+.++.+.. ..++. |+++.-+++.+++++-+.+.+..
T Consensus 154 --~~~~----~~~la~~tl~iii~~~~~~---kg~~~~~aiLigivvg~~~a~~~ 199 (429)
T 3qe7_A 154 --PDSK----TIIISITTLAVTVLGSVLF---RGFLAIIPILIGVLVGYALSFAM 199 (429)
T ss_dssp --CCHH----HHHHHHHHHHHHHHHHHSS---STTTTTHHHHHHHHHHHHHHHHH
T ss_pred --ccHH----HHHHHHHHHHHHHHHHHHh---cccchhhHHHHHHHHHHHHHHHh
Confidence 0111 2233333333222 22222 34455567899998888877654
No 6
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=35.49 E-value=40 Score=23.93 Aligned_cols=21 Identities=19% Similarity=0.365 Sum_probs=16.4
Q ss_pred CccHHHHHHHHHHHHHHHHHH
Q 037025 282 KVPVAYIFAAFIPAAMIVGLY 302 (366)
Q Consensus 282 ~~p~~~i~~A~iPAlll~iLi 302 (366)
.+|+|.+..|.+-|+++..|+
T Consensus 6 ~vp~WiIi~svl~GLLLL~Li 26 (54)
T 2l8s_A 6 RVPLWVILLSAFAGLLLLMLL 26 (54)
T ss_dssp CCCTHHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHHH
Confidence 578999988888888776554
No 7
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=33.95 E-value=43 Score=23.75 Aligned_cols=21 Identities=5% Similarity=0.466 Sum_probs=16.4
Q ss_pred CccHHHHHHHHHHHHHHHHHH
Q 037025 282 KVPVAYIFAAFIPAAMIVGLY 302 (366)
Q Consensus 282 ~~p~~~i~~A~iPAlll~iLi 302 (366)
.+|+|.+..|.+-|+++..|+
T Consensus 9 ~vp~wiIi~svl~GLllL~li 29 (54)
T 2knc_A 9 AIPIWWVLVGVLGGLLLLTIL 29 (54)
T ss_dssp TCCHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHH
Confidence 589999998888888776544
No 8
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=33.80 E-value=48 Score=22.25 Aligned_cols=21 Identities=5% Similarity=0.466 Sum_probs=16.4
Q ss_pred CccHHHHHHHHHHHHHHHHHH
Q 037025 282 KVPVAYIFAAFIPAAMIVGLY 302 (366)
Q Consensus 282 ~~p~~~i~~A~iPAlll~iLi 302 (366)
.+|+|.+..|.+-|+++..|+
T Consensus 7 ~vp~wiIi~s~l~GLllL~li 27 (42)
T 2k1a_A 7 AIPIWWVLVGVLGGLLLLTIL 27 (42)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHH
Confidence 589999998888888776554
No 9
>4b19_A PEPA1; toxin, toxin apoptotic peptide, apoptosis; NMR {Staphylococcus aureus}
Probab=14.05 E-value=51 Score=20.60 Aligned_cols=15 Identities=7% Similarity=0.273 Sum_probs=12.1
Q ss_pred HHhhhhhhHHHHHhc
Q 037025 73 LSSTALCGIVHSVLG 87 (366)
Q Consensus 73 lls~ai~Giifslf~ 87 (366)
++++.++|++-++|+
T Consensus 7 iia~visGcivalF~ 21 (30)
T 4b19_A 7 IIAPVISGCAIAFFS 21 (30)
T ss_dssp STTTTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 567899999988874
No 10
>2lcn_A WALP19-P10 peptide; proline distortion, transmembrane, membrane protein; HET: ETA; NMR {Synthetic}
Probab=12.31 E-value=1.6e+02 Score=17.21 Aligned_cols=16 Identities=19% Similarity=0.196 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHH
Q 037025 286 AYIFAAFIPAAMIVGL 301 (366)
Q Consensus 286 ~~i~~A~iPAlll~iL 301 (366)
|+...|+.||+.+.+-
T Consensus 3 wwlalalapalalalw 18 (26)
T 2lcn_A 3 WWLALALAPALALALW 18 (26)
T ss_pred HHHHHHHhHHHHHHHH
Confidence 5677788899877653
Done!