Your job contains 1 sequence.
>037028
MAPDFQWRHGLCLDDKDNEAMGLDLNYSATACYRCFNLSTLANHSCTWSTSDETRNHKRI
KKTSMIDESSGSSSRLCNSLNSLPRLQFRDHVWVYTQRYLAIEAMEEAALAMMIDKDTEV
KEEGNGDGMKLVQQLIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLS
DRLALVQPLGAVGVVGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASILEAFEGE
SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRY
ADGLKLNFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLH
QLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAE
EIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPIKMLMQAKQWLRKVQTCEGYTIIE
EKGCLVLGWKSKPIIAASCWKCS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037028
(503 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 618 2.4e-60 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 610 1.7e-59 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 363 2.0e-59 2
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 605 5.7e-59 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 601 1.5e-58 1
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 585 7.5e-57 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 557 7.0e-54 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 553 1.9e-53 1
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 543 2.1e-52 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 531 4.0e-51 1
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 507 1.4e-48 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 458 4.2e-47 2
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 483 4.8e-46 1
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 474 9.8e-45 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 468 1.9e-44 1
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 471 3.5e-44 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 452 9.3e-43 1
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 448 2.5e-42 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 440 5.1e-41 1
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 427 4.2e-40 1
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 386 9.2e-36 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 361 5.0e-33 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 335 2.9e-29 1
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 318 1.7e-28 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 190 1.6e-25 2
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 305 1.3e-24 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 271 5.1e-21 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 272 6.3e-21 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 263 3.5e-20 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 254 9.3e-19 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 244 1.3e-17 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 206 1.4e-13 1
UNIPROTKB|Q1AHE4 - symbol:SCL "SCARECROW-like protein" sp... 146 2.0e-09 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 133 1.1e-06 1
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 144/387 (37%), Positives = 223/387 (57%)
Query: 127 DGMKLVQQLIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSDRLALV 186
+G++LV L+ACAEAV + A AL+ ++ A+ + ++VA+ F + L+ R+ +
Sbjct: 165 NGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEALARRIYRL 224
Query: 187 QPLGAVGVVGSAAKSMAITSERDESLSL-VYEICPQIQFGHFVANASILEAFEGESLVHV 245
P ++S I ++L + YE CP ++F HF AN +ILEAF+G+ VHV
Sbjct: 225 SP----------SQS-PIDHSLSDTLQMHFYETCPYLKFAHFTANQAILEAFQGKKRVHV 273
Query: 246 VDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCS----ERLGEIGDELKRYA 301
+D M+ GL QW +LMQ+L R G P ++TG+G + + L E+G +L A
Sbjct: 274 IDFSMSQGL----QWPALMQALALRPGGPPV-FRLTGIGPPAPDNFDYLHEVGCKLAHLA 328
Query: 302 DGLKLNFEFLA-VEKSLETLQAKDINVEDGEV--LVMNSILELHCVVKESRGALNSVLQR 358
+ + + FE+ V +L L A + + E+ + +NS+ ELH ++ GA++ VL
Sbjct: 329 EAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRP-GAIDKVLGV 387
Query: 359 LHQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYF 418
++Q+ P++ +VEQ+S+HN P FL RF E+LHYYS +FDSL+ + P K + + Y
Sbjct: 388 VNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGV-PSGQDK--VMSEVYL 444
Query: 419 AEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPI--KMLMQAKQWLRKVQTCEGY 476
++I N+V+C+GP RVERHE + QWR R AGF + I QA L EGY
Sbjct: 445 GKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGY 504
Query: 477 TIIEEKGCLVLGWKSKPIIAASCWKCS 503
+ E GCL+LGW ++P+IA S WK S
Sbjct: 505 RVEESDGCLMLGWHTRPLIATSAWKLS 531
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 141/387 (36%), Positives = 215/387 (55%)
Query: 127 DGMKLVQQLIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSDRLALV 186
+G++LV L+ACAEA+ + A AL+ ++ A+ + ++VA+ F + L+ R+ +
Sbjct: 217 NGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRIYRL 276
Query: 187 QPLGAVGVVGSAAKSMAITSERDESLSL-VYEICPQIQFGHFVANASILEAFEGESLVHV 245
P I ++L + YE CP ++F HF AN +ILEAFEG+ VHV
Sbjct: 277 SP-----------PQNQIDHCLSDTLQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHV 325
Query: 246 VDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVG----NCSERLGEIGDELKRYA 301
+D M GL QW +LMQ+L R G P ++TG+G + S+ L E+G +L + A
Sbjct: 326 IDFSMNQGL----QWPALMQALALREGG-PPTFRLTGIGPPAPDNSDHLHEVGCKLAQLA 380
Query: 302 DGLKLNFEFLA-VEKSLETLQAK--DINVEDGEVLVMNSILELHCVVKESRGALNSVLQR 358
+ + + FE+ V SL L A ++ D E + +NS+ ELH ++ G + VL
Sbjct: 381 EAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRP-GGIEKVLGV 439
Query: 359 LHQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYF 418
+ Q+ P + +VEQ+S+HNGP FL RF E+LHYYS +FDSL+ + P K + + Y
Sbjct: 440 VKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGV-PNSQDK--VMSEVYL 496
Query: 419 AEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPI--KMLMQAKQWLRKVQTCEGY 476
++I N+V+CEGP RVERHE + QW R +G + QA L + +GY
Sbjct: 497 GKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGY 556
Query: 477 TIIEEKGCLVLGWKSKPIIAASCWKCS 503
+ E GCL+LGW ++P+I S WK S
Sbjct: 557 RVEESNGCLMLGWHTRPLITTSAWKLS 583
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 363 (132.8 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 69/159 (43%), Positives = 105/159 (66%)
Query: 348 SRGALNSVLQRLHQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYD 407
S G +S L + LSPKV+++ EQDS HNG + R +E+L+ Y+A+FD L+ +P+
Sbjct: 325 SSGRTDSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTS 384
Query: 408 TKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPIKM--LMQAKQ 465
R K+E+ F EEIKNI+SCEG R ERHE++++W +R+ AGF +VP+ ++QA+
Sbjct: 385 QDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQAR- 443
Query: 466 WLRKVQTC--EGYTIIEEKGCLVLGWKSKPIIAASCWKC 502
R +Q C +GY I EE GC V+ W+ +P+ + S W+C
Sbjct: 444 --RLLQGCGFDGYRIKEESGCAVICWQDRPLYSVSAWRC 480
Score = 264 (98.0 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 68/215 (31%), Positives = 113/215 (52%)
Query: 128 GMKLVQQLIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSDRLALVQ 187
G+ L+ L+ CA VA +A+A L +L A G + QR+A+ F + L++R+
Sbjct: 51 GLYLIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSW 110
Query: 188 PLGAVGVVGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASILEAFEGESLVHVVD 247
P G + + SE L +E+ P ++ + + N +ILEA EGE +VHV+D
Sbjct: 111 P-GLYKALNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVID 169
Query: 248 LGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN 307
L + QW +L+Q+ +R + P L+ITGV + E L ++ L A+ L +
Sbjct: 170 LDAS----EPAQWLALLQAFNSRP-EGPPHLRITGVHHQKEVLEQMAHRLIEEAEKLDIP 224
Query: 308 FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELH 342
F+F V L+ L + + V+ GE L ++S+L+LH
Sbjct: 225 FQFNPVVSRLDCLNVEQLRVKTGEALAVSSVLQLH 259
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 148/384 (38%), Positives = 221/384 (57%)
Query: 128 GMKLVQQLIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSDRLALVQ 187
G++LVQ L+ACAEAV + + A AL+ + + A + +VA+ F + L+ R+ +
Sbjct: 154 GVRLVQALVACAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRIYRIH 213
Query: 188 PLGAVGVVGSAAKSMAITSERDESLSL-VYEICPQIQFGHFVANASILEAFEGESLVHVV 246
P SAA AI +E L + Y+ CP ++F HF AN +ILEA +VHV+
Sbjct: 214 P--------SAA---AIDPSFEEILQMNFYDSCPYLKFAHFTANQAILEAVTTSRVVHVI 262
Query: 247 DLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLG--EIGDELKRYADGL 304
DLG+ G+ QW +LMQ+L R G P ++TGVGN S R G E+G +L + A +
Sbjct: 263 DLGLNQGM----QWPALMQALALRPGGPPS-FRLTGVGNPSNREGIQELGWKLAQLAQAI 317
Query: 305 KLNFEF--LAVEKSLETLQAKDINVE-DGEVLVMNSILELHCVVKESRGALNSVLQRLHQ 361
+ F+F L E+ L L+ + E LV+NS+ ELH V+ + G++ +L +
Sbjct: 318 GVEFKFNGLTTER-LSDLEPDMFETRTESETLVVNSVFELHPVLSQP-GSIEKLLATVKA 375
Query: 362 LSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLD--AMLPKYDTKRAKIEQFYFA 419
+ P +V +VEQ+++HNG FL RF EALHYYS++FDSL+ ++P D +++ Y
Sbjct: 376 VKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEV---YLG 432
Query: 420 EEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPI--KMLMQAKQWLRKVQTCEGYT 477
+I N+V+ EG R+ERHE + QWR+RM AGF V + QA L +GY
Sbjct: 433 RQILNLVATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYR 492
Query: 478 IIEEKGCLVLGWKSKPIIAASCWK 501
+ E G L+L W++KP+IAAS WK
Sbjct: 493 VEENDGSLMLAWQTKPLIAASAWK 516
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 138/378 (36%), Positives = 215/378 (56%)
Query: 128 GMKLVQQLIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSDRLALVQ 187
G++LV L+ACAEAV + A AL+ + + A + ++VA+ F +GL+ R+ +
Sbjct: 149 GVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRIYRIY 208
Query: 188 PLGAVGVVGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASILEAFEGESLVHVVD 247
P V A++S D YE CP ++F HF AN +ILE F VHV+D
Sbjct: 209 PRDDV----------ALSSFSDTLQIHFYESCPYLKFAHFTANQAILEVFATAEKVHVID 258
Query: 248 LGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN 307
LG+ HG QW +L+Q+L R P ++TG+G + E+G +L + A + +N
Sbjct: 259 LGLN----HGLQWPALIQALALRPNGPPD-FRLTGIGYSLTDIQEVGWKLGQLASTIGVN 313
Query: 308 FEFLAVE-KSLETLQAKDINVEDG-EVLVMNSILELHCVVKESRGALNSVLQRLHQLSPK 365
FEF ++ +L L+ + +++ G E + +NS+ ELH ++ G+++ L + + P
Sbjct: 314 FEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHP-GSIDKFLSTIKSIRPD 372
Query: 366 VVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNI 425
++ +VEQ+++HNG FL RF E+LHYYS++FDSL+ P D R E F +I N+
Sbjct: 373 IMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGP-PSQD--RVMSELF-LGRQILNL 428
Query: 426 VSCEGPARVERHERVDQWRRRMSRAGFQSVPI--KMLMQAKQWLRKVQTCEGYTIIEEKG 483
V+CEG RVERHE ++QWR R GF+ V I QA L +GY + E +G
Sbjct: 429 VACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEG 488
Query: 484 CLVLGWKSKPIIAASCWK 501
CL+LGW+++P+IA S W+
Sbjct: 489 CLLLGWQTRPLIATSAWR 506
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 142/386 (36%), Positives = 212/386 (54%)
Query: 128 GMKLVQQLIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSDRLALVQ 187
G++LV L+ACAEA+ + A AL+ + A + +VA+ F Q L+ R+
Sbjct: 177 GVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYR-- 234
Query: 188 PLGAVGVVGSAAKSMAITSERDESLSL-VYEICPQIQFGHFVANASILEAFEGESLVHVV 246
A+ +E L + YE CP ++F HF AN +ILEA VHV+
Sbjct: 235 -----DYTAETDVCAAVNPSFEEVLEMHFYESCPYLKFAHFTANQAILEAVTTARRVHVI 289
Query: 247 DLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVG----NCSERLGEIGDELKRYAD 302
DLG+ G+ QW +LMQ+L R G P ++TG+G S+ L ++G +L ++A
Sbjct: 290 DLGLNQGM----QWPALMQALALRPGGPPS-FRLTGIGPPQTENSDSLQQLGWKLAQFAQ 344
Query: 303 GLKLNFEF--LAVEKSLETLQAKDINVE-DGEVLVMNSILELHCVVKESRGALNSVLQRL 359
+ + FEF LA E SL L+ + + E LV+NS+ ELH ++ S G++ +L +
Sbjct: 345 NMGVEFEFKGLAAE-SLSDLEPEMFETRPESETLVVNSVFELHRLLARS-GSIEKLLNTV 402
Query: 360 HQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAM--LPKYDTKRAKIEQFY 417
+ P +V +VEQ+++HNG FL RF EALHYYS++FDSL+ LP D +++ Y
Sbjct: 403 KAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEV---Y 459
Query: 418 FAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPI--KMLMQAKQWLRKVQTCEG 475
+I N+V+ EG RVERHE QWR RM AGF + + QA L T +G
Sbjct: 460 LGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDG 519
Query: 476 YTIIEEKGCLVLGWKSKPIIAASCWK 501
Y + E GCL++GW+++P+I S WK
Sbjct: 520 YRVEENDGCLMIGWQTRPLITTSAWK 545
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 144/391 (36%), Positives = 215/391 (54%)
Query: 120 VKEEGNGDGMKLVQQLIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGL 179
V+ GD +KLV L+ACA+AV+ + A + ELR + G QR+ + ++GL
Sbjct: 42 VEAISRGD-LKLV--LVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGL 98
Query: 180 SDRLALVQPLGAVGVVGSAAKSMAITS-ERDESLSLVY---EICPQIQFGHFVANASILE 235
RLA A G S KS+ E E LS VY E+CP +FG+ AN +I E
Sbjct: 99 VARLA------ASG--SSIYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAE 150
Query: 236 AFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGD 295
A + E +H++D +G G QW +L+Q+ R G P ++ITGVG+ S L +
Sbjct: 151 AMKDEERIHIIDF--QIG--QGSQWIALIQAFAARPGGAPN-IRITGVGDGSV-LVTVKK 204
Query: 296 ELKRYADGLKLNFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNS- 354
L++ A + F F AV + ++ ++++V DGE L +N LH + ES N
Sbjct: 205 RLEKLAKKFDVPFRFNAVSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHR 264
Query: 355 --VLQRLHQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAK 412
+L+ + LSPKVV LVEQ+ + N FL RF+E L YY+A+F+S+D MLP+ +R
Sbjct: 265 DRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERIN 324
Query: 413 IEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPIKMLMQA--KQWLRKV 470
IEQ A ++ NI++CEG R+ERHE + +W+ R S AGF+ P+ ++ A + LR
Sbjct: 325 IEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDY 384
Query: 471 QTCEGYTIIEEKGCLVLGWKSKPIIAASCWK 501
GY I E G L LGW + ++++ WK
Sbjct: 385 SN--GYAIEERDGALYLGWMDRILVSSCAWK 413
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 135/389 (34%), Positives = 214/389 (55%)
Query: 115 DKDTEVK-EEGNGDGMKLVQQLIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVAS 173
++ E+K ++ + +G+ L+ L+ CAEAV+ + A+ LL E+ + +GTS QRVA+
Sbjct: 273 ERKEEIKRQKQDEEGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAA 332
Query: 174 CFVQGLSDRLALVQPLGAVGVVGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASI 233
F + +S RL L LG + S + + + + I P ++F HF AN +I
Sbjct: 333 YFSEAMSARL-LNSCLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAI 391
Query: 234 LEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEI 293
EAFE E VH++DL + GL QW L L +R G P +++TG+G E L
Sbjct: 392 QEAFEKEDSVHIIDLDIMQGL----QWPGLFHILASRPGG-PPHVRLTGLGTSMEALQAT 446
Query: 294 GDELKRYADGLKLNFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALN 353
G L +AD L L FEF + + + L + +NV E + ++ + H + + G+
Sbjct: 447 GKRLSDFADKLGLPFEFCPLAEKVGNLDTERLNVRKREAVAVHWLQ--HSLY-DVTGSDA 503
Query: 354 SVLQRLHQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKI 413
L L +L+PKVV +VEQD SH G F LGRF+EA+HYYSA+FDSL A + +R +
Sbjct: 504 HTLWLLQRLAPKVVTVVEQDLSHAGSF-LGRFVEAIHYYSALFDSLGASYGEESEERHVV 562
Query: 414 EQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPI--KMLMQAKQWLRKVQ 471
EQ ++EI+N+++ GP+R + + WR +M + GF+ + + QA L
Sbjct: 563 EQQLLSKEIRNVLAVGGPSR-SGEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFP 621
Query: 472 TCEGYTIIEEKGCLVLGWKSKPIIAASCW 500
+ +GYT++++ G L LGWK ++ AS W
Sbjct: 622 S-DGYTLVDDNGTLKLGWKDLSLLTASAW 649
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 129/378 (34%), Positives = 207/378 (54%)
Query: 135 LIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSDRLALVQPLGAVGV 194
L++CA+A++ D A +++ +LR V G QR+ + ++GL +LA ++
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLA--SSGSSIYK 180
Query: 195 VGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASILEAFEGESLVHVVDLGMTLGL 254
+ A T E + ++YE+CP +FG+ AN +I EA + E+ VH++D +G
Sbjct: 181 ALNRCPEPAST-ELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDF--QIG- 236
Query: 255 PHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSER------LGEIGDELKRYADGLKLNF 308
G QW +L+Q+ R G P R++ITG+ + + L +G+ L + A + F
Sbjct: 237 -QGSQWVTLIQAFAARPGG-PPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPF 294
Query: 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNS---VLQRLHQLSPK 365
EF +V S+ ++ K++ V GE L +N LH + ES N +L+ + LSPK
Sbjct: 295 EFNSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPK 354
Query: 366 VVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNI 425
VV LVEQ+S+ N F RFME ++YY+A+F+S+D LP+ +R +EQ A ++ NI
Sbjct: 355 VVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNI 414
Query: 426 VSCEGPARVERHERVDQWRRRMSRAGFQSVPIKMLMQA--KQWLRKVQTCEGYTIIEEKG 483
++CEG RVERHE + +WR R AGF P+ L+ + K LR + Y + E G
Sbjct: 415 IACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYS--DKYRLEERDG 472
Query: 484 CLVLGWKSKPIIAASCWK 501
L LGW + ++A+ WK
Sbjct: 473 ALYLGWMHRDLVASCAWK 490
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 136/382 (35%), Positives = 210/382 (54%)
Query: 133 QQLIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSDRLALVQPLGAV 192
Q LI+CA A++ A ++++ELR + G QR+A+ V+GL+ R+A A
Sbjct: 224 QILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMA------AS 277
Query: 193 G-VVGSAAKSMAITS-ERDESLSLVYEICPQIQFGHFVANASILEAFEGESLVHVVDLGM 250
G + A K S ER ++ +++E+CP +FG AN +ILEA +GE VH++D +
Sbjct: 278 GKFIYRALKCKEPPSDERLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDI 337
Query: 251 TLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGN---CSERLGE---IGDELKRYADGL 304
G Q+ +L++S+ GK P RL++TG+ + +G IG L++ A+
Sbjct: 338 N----QGNQYMTLIRSIAELPGKRP-RLRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDN 392
Query: 305 KLNFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQ--- 361
++F+F A+ + + + GE L++N +LH + ES +N + LH
Sbjct: 393 GVSFKFKAMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKS 452
Query: 362 LSPKVVMLVEQDSSHN-GPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAE 420
L+PK+V +VEQD + N PFF RF+EA YYSA+F+SLD LP+ +R +E+ A
Sbjct: 453 LNPKLVTVVEQDVNTNTSPFF-PRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLAR 511
Query: 421 EIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPIKMLMQAK-QWLRKVQTCEGYTII 479
+I NIV+CEG R+ER+E +WR RM AGF P+ + Q L K Q C Y +
Sbjct: 512 DIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLK 571
Query: 480 EEKGCLVLGWKSKPIIAASCWK 501
EE G L W+ K +I AS W+
Sbjct: 572 EEMGELHFCWEEKSLIVASAWR 593
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 133/387 (34%), Positives = 203/387 (52%)
Query: 119 EVKEEGNGDGMKLVQQLIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQG 178
E E +KL+ L+ CAE VA AS LLSE+ FG+S +RV + F Q
Sbjct: 28 ETLENDGAAAIKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQA 87
Query: 179 LSDRLALVQPLGAVGVVGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASILEAFE 238
L R+ GA + ++ + + +L + P I+F HF AN +I +A +
Sbjct: 88 LQTRVISSYLSGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALD 147
Query: 239 GESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELK 298
GE VH++DL + GL QW +L L +R K+ + ++ITG G+ S+ L G L
Sbjct: 148 GEDSVHIIDLDVMQGL----QWPALFHILASRPRKL-RSIRITGFGSSSDLLASTGRRLA 202
Query: 299 RYADGLKLNFEFLAVEKSLETL-QAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQ 357
+A L L FEF +E + L + GE +V++ + H + + L + L+
Sbjct: 203 DFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQ--HRLYDVTGNNLET-LE 259
Query: 358 RLHQLSPKVVMLVEQDSSHN-GPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQF 416
L +L P ++ +VEQ+ S++ G FLGRF+EALHYYSA+FD+L L + +R +EQ
Sbjct: 260 ILRRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQI 319
Query: 417 YFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPIK--MLMQAKQWLRKVQTCE 474
EI+NIV+ G R +R+ +W+ +SR GF+ V ++ QA L +
Sbjct: 320 VLGTEIRNIVAHGGG----RRKRM-KWKEELSRVGFRPVSLRGNPATQAGLLLGMLPW-N 373
Query: 475 GYTIIEEKGCLVLGWKSKPIIAASCWK 501
GYT++EE G L LGWK ++ AS WK
Sbjct: 374 GYTLVEENGTLRLGWKDLSLLTASAWK 400
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 458 (166.3 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 109/299 (36%), Positives = 162/299 (54%)
Query: 217 EICPQIQFGHFVANASILEAFE--GESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKV 274
++ P I+FGH AN +IL+A E +H++DL ++ GL QW LMQ+L RS
Sbjct: 151 QLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGL----QWPPLMQALAERSSNP 206
Query: 275 ---PKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEF---LAVEKSLE--TLQAK--D 324
P L+ITG G L GD L R+AD L L F+F + VE+ L LQ +
Sbjct: 207 SSPPPSLRITGCGRDVTGLNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLA 266
Query: 325 INVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLVEQDSSHNGPFFLGR 384
++ GE + +N + LH + + + L + L+ ++V + E++++H FL R
Sbjct: 267 LSAVQGETIAVNCVHFLHKIFNDDGDMIGHFLSAIKSLNSRIVTMAEREANHGDHSFLNR 326
Query: 385 FMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWR 444
F EA+ +Y AIFDSL+A LP +R +EQ +F +EI ++V+ E R +RH R + W
Sbjct: 327 FSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWE 386
Query: 445 RRMSRAGFQSVPIKM--LMQAKQWLRKVQTCEGYTIIEEKGCLVLGWKSKPIIAASCWK 501
M R GF +VPI L QAK LR EGY + L LGW+++P+ + S WK
Sbjct: 387 EMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNNSLFLGWQNRPLFSVSSWK 445
Score = 52 (23.4 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 135 LIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSDRL 183
L A V+ + A LLS L +N+ G S +R+ F + LS R+
Sbjct: 45 LFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRI 93
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 127/379 (33%), Positives = 198/379 (52%)
Query: 135 LIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSDRLALVQPLGAVGV 194
L CA+AV D L+S+L+ V G QR+ + ++GL RLA +
Sbjct: 231 LYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLA-----SSGSS 285
Query: 195 VGSAAKSMAITS-ERDESLSLVYEICPQIQFGHFVANASILEAFEGESLVHVVDLGMTLG 253
+ A + T E + ++YE CP +FG+ AN +I EA + ES VH++D ++
Sbjct: 286 IYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQIS-- 343
Query: 254 LPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSE---RLGE---IGDELKRYADGLKLN 307
G QW SL+++L R G P ++ITG+ + R G +G L + A+ +
Sbjct: 344 --QGGQWVSLIRALGARPGG-PPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVP 400
Query: 308 FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNS---VLQRLHQLSP 364
FEF ++ + + V +GE L +N L LH + ES N +L+ + LSP
Sbjct: 401 FEFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSP 460
Query: 365 KVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKN 424
VV LVEQ+++ N FL RF+E +++Y A+F+S+D L + +R +EQ A E+ N
Sbjct: 461 NVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVN 520
Query: 425 IVSCEGPARVERHERVDQWRRRMSRAGFQSVPIKMLMQA--KQWLRKVQTCEGYTIIEEK 482
+++CEG R ERHE + +WR R AGF+ P+ + A K L E YT+ E
Sbjct: 521 LIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYS--EKYTLEERD 578
Query: 483 GCLVLGWKSKPIIAASCWK 501
G L LGWK++P+I + W+
Sbjct: 579 GALYLGWKNQPLITSCAWR 597
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 474 (171.9 bits), Expect = 9.8e-45, P = 9.8e-45
Identities = 121/391 (30%), Positives = 199/391 (50%)
Query: 122 EEGNGDGMKLVQQLIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSD 181
+ G + + L LI CA+AVA D+ A LL ++R+++ FG QR+A CF GL
Sbjct: 335 QNGKKEVVDLRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEA 394
Query: 182 RLALVQPLGAVGVVGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASILEAFEGES 241
RLA G+V + A+ L CP + +F+ N +I +
Sbjct: 395 RLAGTGSQIYKGIVSKPRSAAAVLKAHQ----LFLACCPFRKLSYFITNKTIRDLVGNSQ 450
Query: 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGV-----G-NCSERLGEIGD 295
VHV+D G+ G QW +L+ + G PK ++ITG+ G ++R+ E G
Sbjct: 451 RVHVIDFGILYGF----QWPTLIHRF-SMYGS-PK-VRITGIEFPQPGFRPAQRVEETGQ 503
Query: 296 ELKRYADGLKLNFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKES---RGAL 352
L YA + FE+ A+ K + +Q +D++++ E+ V+N + + ES
Sbjct: 504 RLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDRDEITVVNCLYRAENLHDESVKVESCR 563
Query: 353 NSVLQRLHQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAK 412
++VL + +++P + + + ++N PFF+ RF EAL ++S+IFD L+ ++P+ D +R
Sbjct: 564 DTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMF 623
Query: 413 IEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPIKMLMQAKQWLRKVQT 472
+E F E N+++CEG RVER E QW R R+G VP + K L KV T
Sbjct: 624 LEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIM-KTSLHKVHT 682
Query: 473 C--EGYTIIEEKGCLVLGWKSKPIIAASCWK 501
+ + I ++ L+ GWK + ++A S WK
Sbjct: 683 FYHKDFVIDQDNRWLLQGWKGRTVMALSVWK 713
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 116/387 (29%), Positives = 194/387 (50%)
Query: 130 KLVQQLIACAEAVACRDKAHASALLSELRVNALVFG-TSFQRVASCFVQGLSDRLALVQP 188
+LV L C +A+ R+ A + ++ A G T R+ + +++ L+ R+A + P
Sbjct: 273 ELVNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRVARMWP 332
Query: 189 LGAVGVVGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASILEAFEGESLVHVVDL 248
+ + E +L + ++ P +F HF AN +L AFEG+ VH++D
Sbjct: 333 -HIFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDF 391
Query: 249 GMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNF 308
+ GL QW S QSL +R P ++ITG+G L E GD L +A+ + L F
Sbjct: 392 DIKQGL----QWPSFFQSLASRINP-PHHVRITGIGESKLELNETGDRLHGFAEAMNLQF 446
Query: 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGA-LNSVLQRLHQLSPKVV 367
EF V LE ++ ++V++GE + +N ++++H + + GA + L + +P +
Sbjct: 447 EFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAIRDFLGLIRSTNPIAL 506
Query: 368 MLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVS 427
+L EQ++ HN R +L YYSA+FD++ L R K+E+ F EI+NIV+
Sbjct: 507 VLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVA 566
Query: 428 CEGPARVERHERVDQWRRRMSRAGFQSVPI--KMLMQAKQWLRKVQTC-EGYTIIEEK-- 482
CEG R ERH WRR + + GF+S+ + + ++Q+K LR + EG+ +E
Sbjct: 567 CEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSDNEGFFNVERSDE 626
Query: 483 ---------GCLVLGWKSKPIIAASCW 500
G + L W +P+ S W
Sbjct: 627 DNGGEGGRGGGVTLRWSEQPLYTISAW 653
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 471 (170.9 bits), Expect = 3.5e-44, P = 3.5e-44
Identities = 118/379 (31%), Positives = 199/379 (52%)
Query: 135 LIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSDRLALVQPLGAVGV 194
L+ CA+AV+ D+ A+ +L ++R ++ G +R+A F L RLA G
Sbjct: 397 LVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLA------GTGT 450
Query: 195 VGSAAKSMAITSERD--ESLSLVYEICPQIQFGHFVANASILEAFEGESLVHVVDLGMTL 252
A S TS D ++ +CP + AN S++ + +H++D G++
Sbjct: 451 QIYTALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISY 510
Query: 253 GLPHGRQWHSLMQSL-VNRSGKVPKRLKITGV-----G-NCSERLGEIGDELKRYADGLK 305
G QW +L+ L ++R G PK L+ITG+ G +E + E G L RY
Sbjct: 511 GF----QWPALIHRLSLSRPGGSPK-LRITGIELPQRGFRPAEGVQETGHRLARYCQRHN 565
Query: 306 LNFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKES---RGALNSVLQRLHQL 362
+ FE+ A+ + ET+Q +D+ + GE +V+NS+ ++ E+ ++VL+ + ++
Sbjct: 566 VPFEYNAIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKI 625
Query: 363 SPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEI 422
+P V + ++N PFF+ RF EAL +YSA+FD D+ L + D R E+ ++ EI
Sbjct: 626 NPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREI 685
Query: 423 KNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPI-KMLMQAKQWLRKVQTCEGYTIIEE 481
N+V+CEG RVER E QW+ R+ RAGF+ +P+ K LMQ + + + + + +
Sbjct: 686 VNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDVDQN 745
Query: 482 KGCLVLGWKSKPIIAASCW 500
L+ GWK + + A+S W
Sbjct: 746 GNWLLQGWKGRIVYASSLW 764
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 122/399 (30%), Positives = 203/399 (50%)
Query: 115 DKDTEVKEEGNGD-GMKLVQQLIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVAS 173
D +T E+ + D L++ + CA ++ D AS L ++R + G +RVA
Sbjct: 200 DPETNDSEDDDFDLEPPLLKAIYDCAR-ISDSDPNEASKTLLQIRESVSELGDPTERVAF 258
Query: 174 CFVQGLSDRLALVQPLGAVGVVGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASI 233
F + LS+RL+ P + + S + T + S + + CP +F H AN +I
Sbjct: 259 YFTEALSNRLSPNSP--------ATSSSSSSTEDLILSYKTLNDACPYSKFAHLTANQAI 310
Query: 234 LEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGV-----GNCSE 288
LEA E + +H+VD G+ G+ QW +L+Q+L R+ P +++++G+ G E
Sbjct: 311 LEATEKSNKIHIVDFGIVQGI----QWPALLQALATRTSGKPTQIRVSGIPAPSLGESPE 366
Query: 289 -RLGEIGDELKRYADGLKLNFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKE 347
L G+ L+ +A L LNF+F+ + + L V+ EVL +N +L+L+ ++ E
Sbjct: 367 PSLIATGNRLRDFAKVLDLNFDFIPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDE 426
Query: 348 SRGALNSVLQRLHQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYD 407
+ +++ L+ L+P+VV L E + S N F R AL +YSA+F+SL+ L +
Sbjct: 427 TPTIVDTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDS 486
Query: 408 TKRAKIEQFYFAEEIKNIVSCE--GPARVERHERVDQWRRRMSRAGFQSVPIK--MLMQA 463
+R ++E+ F I ++ E G R ER E +QWR M AGF+SV + + QA
Sbjct: 487 EERVRVERELFGRRISGLIGPEKTGIHR-ERMEEKEQWRVLMENAGFESVKLSNYAVSQA 545
Query: 464 KQWLRKVQTCEGYTIIEEK-GCLVLGWKSKPIIAASCWK 501
K L Y+I+E K G + L W P++ S W+
Sbjct: 546 KILLWNYNYSNLYSIVESKPGFISLAWNDLPLLTLSSWR 584
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 122/382 (31%), Positives = 190/382 (49%)
Query: 135 LIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSDRLALVQPLGAVGV 194
L CA+AVA D+ A+ L E+R ++ G QR+A F + L R+ G +
Sbjct: 228 LTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARIT-----GNISP 282
Query: 195 VGSAAKSMAITSERD--ESLSLVYEICPQIQFGHFVANASILEAFEGESLVHVVDLGMTL 252
S + TS D ++ L CP +F AN SI E + +H+VD G+
Sbjct: 283 PVSNPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELAMKATKLHIVDFGVLY 342
Query: 253 GLPHGRQWHSLMQSLVNRSGKVPKRLKITGV-----G-NCSERLGEIGDELKRYADGLKL 306
G QW L+++L R G P L++TG+ G S+R+ E G LKR+ D +
Sbjct: 343 GF----QWPCLLRALSKRPGG-PPMLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNV 397
Query: 307 NFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKES---RGALNSVLQRLHQLS 363
FEF + K ET+ ++ + GE V+N I L E+ ++VL+ ++
Sbjct: 398 PFEFNFIAKKWETITLDELMINPGETTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDIN 457
Query: 364 PKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDT--KRAKIEQFYFAEE 421
P + + E + +N PFF+ RF EAL +YS++FD D + D R+ +E+ +
Sbjct: 458 PDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRD 517
Query: 422 IKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPI-KMLM-QAKQWLRKVQTCEGYTII 479
+++SCEG R R E QWR R+ RAGF+ I K +M +AK+ +RK + + I
Sbjct: 518 AMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRK-RYHRDFVID 576
Query: 480 EEKGCLVLGWKSKPIIAASCWK 501
+ ++ GWK + I A SCWK
Sbjct: 577 SDNNWMLQGWKGRVIYAFSCWK 598
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 440 (159.9 bits), Expect = 5.1e-41, P = 5.1e-41
Identities = 114/379 (30%), Positives = 193/379 (50%)
Query: 135 LIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSDRLALVQPLGAVGV 194
L CA++V+ DK A LL ++R G + QR+A F L RL
Sbjct: 319 LTLCAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGTMIQSY 378
Query: 195 VGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASILEAFEGESLVHVVDLGMTLGL 254
S + ++ +S S+ P + +F +N IL+A + S++H+VD G+ G
Sbjct: 379 YDSISSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIVDFGILYGF 438
Query: 255 PHGRQWHSLMQSLVNRSGKVPKRLKITGV-----G-NCSERLGEIGDELKRYADGLKLNF 308
QW +Q L ++S ++L+ITG+ G +ER+ + G L Y + F
Sbjct: 439 ----QWPMFIQHL-SKSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPF 493
Query: 309 EFLAV-EKSLETLQAKDINVEDGEVLVMNSILE---LHCVVK-ESRGALNSVLQRLHQLS 363
E+ A+ K+ ET++ ++ + EVL +N++L L V+ E + L+ + ++
Sbjct: 494 EYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMN 553
Query: 364 PKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIK 423
P V + + S N PFF RF EAL +YSA+FD A L K + +R E ++ E+
Sbjct: 554 PNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVM 613
Query: 424 NIVSCEGPARVERHERVDQWRRRMSRAGFQSVPIKM-LMQA-KQWLRKVQTCEGYTIIEE 481
N+++CEG RVER E QW+ RM RAGF+ P++ L+Q ++ ++K + + + E+
Sbjct: 614 NVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVLDED 673
Query: 482 KGCLVLGWKSKPIIAASCW 500
+ GWK + + ++SCW
Sbjct: 674 SNWFLQGWKGRILFSSSCW 692
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 114/393 (29%), Positives = 195/393 (49%)
Query: 121 KEEGNGDGMKLVQQLIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLS 180
K++ + + + L+ CA+AVA D+ A L E+R ++ G + QR+ F + L
Sbjct: 199 KQQKSDQPVDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQRLGYHFAEALE 258
Query: 181 DRLALVQPLGAVGVVGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASILEAFEGE 240
R+ G + SA S + ++ + CP + +F AN +I E
Sbjct: 259 ARIT-----GTMTTPISATSSRTSMVDILKAYKGFVQACPTLIMCYFTANRTINELASKA 313
Query: 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRS-GKVPKRLKITGV-----G-NCSERLGEI 293
+ +H++D G+ G QW L+Q+L R G P L++TG+ G SER+ E
Sbjct: 314 TTLHIIDFGILYGF----QWPCLIQALSKRDIG--PPLLRVTGIELPQSGFRPSERVEET 367
Query: 294 GDELKRYADGLKLNFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALN 353
G LKR+ D + FE+ + K+ E + D+ + GE V+N IL L E+ +LN
Sbjct: 368 GRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCILRLQYTPDETV-SLN 426
Query: 354 S----VLQRLHQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTK 409
S L+ ++P + + E + ++N PFFL RF EAL + S++FD + L + D
Sbjct: 427 SPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNC 486
Query: 410 RAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPI-KMLMQAKQWLR 468
R +E+ + ++++CEG R R E QW+ R+ RAGF+ + K +++ + +
Sbjct: 487 RTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIV 546
Query: 469 KVQTCEGYTIIEEKGCLVLGWKSKPIIAASCWK 501
K + + + I + + GWK + + A SCWK
Sbjct: 547 KERYHKDFVIDNDNHWMFQGWKGRVLYAVSCWK 579
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 98/305 (32%), Positives = 159/305 (52%)
Query: 211 SLSLVYEICPQIQFGHFVANASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNR 270
S + + CP +F H AN +ILEA + +H+VD G+ G+ QW +L+Q+L R
Sbjct: 242 SYKTLNDACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGI----QWSALLQALATR 297
Query: 271 SGKVPKRLKITGV-----GNC-SERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQAKD 324
S P R++I+G+ G+ L G+ L+ +A L LNFEF V ++ L
Sbjct: 298 SSGKPTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSS 357
Query: 325 INVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLVEQDSSHNGPFFLGR 384
V+ EVLV+N +LEL+ ++ E+ + + L+ L+P++V L E + S N F R
Sbjct: 358 FRVDPDEVLVVNFMLELYKLLDETATTVGTALRLARSLNPRIVTLGEYEVSLNRVEFANR 417
Query: 385 FMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEG----PA-RVERHER 439
+L +YSA+F+SL+ L + +R ++E+ F I ++V + P R E
Sbjct: 418 VKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEE 477
Query: 440 VDQWRRRMSRAGFQSV-PIKMLM-QAKQWLRKVQTCEGYTIIE-EKGCLVLGWKSKPIIA 496
+QWR M +AGF+ V P + QAK L Y+++E E G + L W + P++
Sbjct: 478 KEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLT 537
Query: 497 ASCWK 501
S W+
Sbjct: 538 VSSWR 542
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 361 (132.1 bits), Expect = 5.0e-33, P = 5.0e-33
Identities = 109/392 (27%), Positives = 196/392 (50%)
Query: 135 LIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSDRLALVQPLGAVGV 194
L+ A A + +D A A +L L + +G + Q++AS F+Q L +R+ +
Sbjct: 147 LLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTM 206
Query: 195 VGSAAKSMAITSERDESLSLVY-EICPQIQFGHFVANASILEAFEGESLVHVVDLGMTLG 253
V +AA + E L + E+ P FGH AN +ILEA +GE+ +H+VD+ T
Sbjct: 207 VTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFC 266
Query: 254 LPHGRQWHSLMQSLVNRSGKVPK-RLKITGVGN-------CSERL-GEIGDELKRYADGL 304
QW +L+++L RS P RL V N S R+ EIG+ ++++A +
Sbjct: 267 T----QWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLM 322
Query: 305 KLNFEFLAVEK--SLETLQAKDINVEDGEVLVMNSILELHCVVKESRGA-LNSVLQRLHQ 361
+ F+F + L +++V+ EVL +N + +H + SRG+ ++V+ +
Sbjct: 323 GVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIA--SRGSPRDAVISSFRR 380
Query: 362 LSPKVVMLVEQDSS----HNGPF---FLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIE 414
L P++V +VE+++ G F FL F E L ++ F+S + P+ +R +E
Sbjct: 381 LRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLE 440
Query: 415 QFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPI--KMLMQAKQWLRKVQT 472
+ I ++V+CE ER E +W RRM +GF +V ++ + LR+ +
Sbjct: 441 RAA-GRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYK- 498
Query: 473 CEG-YTIIE--EKGCLVLGWKSKPIIAASCWK 501
EG +++++ + + L W+ +P++ AS W+
Sbjct: 499 -EGVWSMVQCPDAAGIFLCWRDQPVVWASAWR 529
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 335 (123.0 bits), Expect = 2.9e-29, P = 2.9e-29
Identities = 111/388 (28%), Positives = 183/388 (47%)
Query: 128 GMKLVQQLIACAEAVACRDKAHASALLSELRVNALVF-G--TSFQRVASCFVQGLSDRLA 184
G++LV L+A A+A +K+ + R+ LV G T+ +R+A+ F GLS L
Sbjct: 101 GLRLVHLLVAAADASTGANKSRELTRVILARLKDLVSPGDRTNMERLAAHFTNGLSKLLE 160
Query: 185 LVQPLGAVGVVGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASILEAFEGESLVH 244
L + S + L+ + P + FG+ A +ILEA + E +H
Sbjct: 161 RDSVLCPQQHRDDVYDQADVIS----AFELLQNMSPYVNFGYLTATQAILEAVKYERRIH 216
Query: 245 VVDLGMTLGLPHGRQWHSLMQSLVNRS-GKVPKRLKITGVGNCSE------RLGEIGDEL 297
+VD + G+ QW SLMQ+LV+R+ G + L+IT + + + E G L
Sbjct: 217 IVDYDINEGV----QWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRL 272
Query: 298 KRYADGLKLNFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQ 357
+AD + F + + + + GE +V+N +L L ++ ++ S L
Sbjct: 273 TAFADSIGQPFSYQHCKLDTNAFSTSSLKLVRGEAVVINCMLHLPRFSHQTPSSVISFLS 332
Query: 358 RLHQLSPKVVMLVEQDSSHNG-PFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQF 416
L+PK+V LV ++ G FL RFM+ LH +SAIFDSL+A L + R +E+
Sbjct: 333 EAKTLNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVERV 392
Query: 417 YFAEEIKNIVS--CEGPARVERHERVDQWRRRMSRAGFQSVPIKMLMQAKQWLRKVQTCE 474
+ + N ++ A VE QW + GF+ + + + + L +
Sbjct: 393 FIGPWVANWLTRITANDAEVESFASWPQW---LETNGFKPLEVSFTNRCQAKLLLSLFND 449
Query: 475 GYTIIEEKGC--LVLGWKSKPIIAASCW 500
G+ + EE G LVLGWKS+ +++AS W
Sbjct: 450 GFRV-EELGQNGLVLGWKSRRLVSASFW 476
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 318 (117.0 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 114/400 (28%), Positives = 179/400 (44%)
Query: 124 GNGDGMKLVQQLIACAEAVACRDKAHASALLSELRVNALVFGTSFQRVASCFVQGLSDRL 183
G GD + Q L+ CA A+ D A +L L A G S QR+ S F++ L R
Sbjct: 20 GCGDANFMEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRA 79
Query: 184 ALVQPLGAVGVVGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASILEAFEGESLV 243
P + + ++ + L+ ++ P +FG ANA+IL A EG S V
Sbjct: 80 VSKTPTLS-STISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTV 138
Query: 244 HVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSE-------RLGEIGDE 296
H+VDL +T H Q +L+ ++ +R K P LK+T V + E+G +
Sbjct: 139 HIVDLSLT----HCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSK 194
Query: 297 LKRYADGLKLNFEFLAVEKSLET-----LQAKDINVED-GEVLVMNSILELHCVVKE--- 347
L +A + EF V + LQ I E LV+N + L + +E
Sbjct: 195 LVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLT 254
Query: 348 -SRGALNSV-LQRLHQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPK 405
S +L +V L++L L+P++V L+E+D + R A +Y+ FD+ D + +
Sbjct: 255 SSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTFMSE 314
Query: 406 YDTKRAKIEQFYFAE---EIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPIK--ML 460
++Y AE +I+N+V+ EG RVER E +W RM A F V +K +
Sbjct: 315 Q-------RRWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAV 367
Query: 461 MQAKQWLRKVQTCEGYTIIEEKGCLVLGWKSKPIIAASCW 500
K L + G ++ LVL WK ++ A+ W
Sbjct: 368 ADVKAMLEEHAVGWGMKKEDDDESLVLTWKGHSVVFATVW 407
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 190 (71.9 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 52/190 (27%), Positives = 92/190 (48%)
Query: 322 AKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLVEQDSSHNG--- 378
A + E L +N ++ LH + L + L+ + +SP VV + E+++ G
Sbjct: 255 ATGLEFHPDETLAVNCVMFLHNLAGHDE--LAAFLKWVKAMSPAVVTIAEREAGGGGGGG 312
Query: 379 ---PFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVE 435
R A+ +YSA+F++L+A +P +R +EQ EI+ V GP+
Sbjct: 313 DHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAV---GPSGGR 369
Query: 436 RHERVDQWRRRMSRAGFQSVPIKM--LMQAKQWLRKVQTCEGYTIIEEKGCLVLGWKSKP 493
+++W AGF + P+ + QA+ LR EGY + E +G LGW+++P
Sbjct: 370 WWRGIERWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFLGWQTRP 429
Query: 494 IIAASCWKCS 503
+++ S W+ S
Sbjct: 430 LLSVSAWQPS 439
Score = 172 (65.6 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 56/190 (29%), Positives = 91/190 (47%)
Query: 135 LIACAEAVACRDKAHASALLSELRVNALVF--GTSFQRVASCFVQGLSDRLALVQPLGAV 192
L+ACA+ + R A+ +E+ + A G + R+A F + L+ R+ G V
Sbjct: 54 LLACADLLQ-RGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRVDAKAGHGHV 112
Query: 193 GVVGSAAKSMAITSERDESLSLVY-EICPQIQFGHFVANASILEAFEGESLVHVVDLGMT 251
V G AA+ + L + +I P ++F H AN +ILEA +G VH++DL
Sbjct: 113 VVGGGAARPAS------SGAYLAFNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAV 166
Query: 252 LGLPHGRQWHSLMQSLVNRSGKV--PKRLKITGVGNCSERLGEIGDELKRYADGLKLNFE 309
HG QW L+Q++ R+ P +++TG G + L G+ L+ +A + L F
Sbjct: 167 ----HGVQWPPLLQAIAERADPALGPPEVRVTGAGADRDTLLRTGNRLRAFARSIHLPFH 222
Query: 310 FLAVEKSLET 319
F + S T
Sbjct: 223 FTPLLLSCAT 232
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 305 (112.4 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 84/278 (30%), Positives = 137/278 (49%)
Query: 239 GESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRS-GKVPKRLKITGVGN----C------S 287
G + HV+D + G + +L +S + +KIT V N C
Sbjct: 364 GMMIPHVIDFDIGEGGQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGE 423
Query: 288 ERLGEIGDELKRYADGLKLNFEFLAVEK-SLETLQAKDINVEDGEVLVMNSILELHCVVK 346
ERL +GD L + D L ++ F V L L + + + E L +N +L+ V
Sbjct: 424 ERLKAVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPD 483
Query: 347 ES---RGALNSVLQRLHQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAML 403
ES + +L+R+ L P+VV LVEQ+ + N FLGR E+ Y A+ +S+++ +
Sbjct: 484 ESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVESTV 543
Query: 404 PKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPIKMLMQA 463
P ++ RAK+E+ ++ N V+CEG R+ER E +WR RMS AGF+ +P+ +
Sbjct: 544 PSTNSDRAKVEEG-IGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAE 602
Query: 464 KQWLRKVQTCEGYTIIEEKGCLVLGWKSKPIIAASCWK 501
R + G+T+ E+ G + GW + + AS W+
Sbjct: 603 SMKSRGNRVHPGFTVKEDNGGVCFGWMGRALTVASAWR 640
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 48/158 (30%), Positives = 75/158 (47%)
Query: 211 SLSLVYEICPQIQFGHFVANASILEAFE----GESLVHVVDLGMTLGLPHGRQWHSLMQS 266
S L+YE+ P + G AN +IL+A + G + HV+D +G G Q+ +L+++
Sbjct: 332 STQLLYELSPCFKLGFEAANLAILDAADNNDGGMMIPHVIDFD--IG--EGGQYVNLLRT 387
Query: 267 L-VNRSGKVPKR----LKITGVGN----C------SERLGEIGDELKRYADGLKLNFEFL 311
L R+GK + +KIT V N C ERL +GD L + D L ++ F
Sbjct: 388 LSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLSQLGDRLGISVSFN 447
Query: 312 AVEK-SLETLQAKDINVEDGEVLVMNSILELHCVVKES 348
V L L + + + E L +N +L+ V ES
Sbjct: 448 VVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPDES 485
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 271 (100.5 bits), Expect = 5.1e-21, P = 5.1e-21
Identities = 107/396 (27%), Positives = 175/396 (44%)
Query: 125 NGDGMKLVQQLIACAEAVACRDKAHASALLSEL--RVNALVFGTSFQRVASCFVQGLSDR 182
NG G ++ LI + V + A +LS L R+ + G QR A F + L
Sbjct: 117 NG-GFDFIEDLIRVVDCVESDELQLAQVVLSRLNQRLRSPA-GRPLQRAAFYFKEALGSF 174
Query: 183 LALVQPLGAVGVVGSAAKSMAITS--ERDESLSLVYE---ICPQIQFGHFVANASILEAF 237
L GS + ++S E + + + E I P F HF AN +IL++
Sbjct: 175 LT-----------GSNRNPIRLSSWSEIVQRIRAIKEYSGISPIPLFSHFTANQAILDSL 223
Query: 238 EGES---LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGV--GNCSERLGE 292
+S VHVVD +G G Q+ SLM+ + +S L++T V C+
Sbjct: 224 SSQSSSPFVHVVDF--EIGF--GGQYASLMREITEKSVS-GGFLRVTAVVAEECAVETRL 278
Query: 293 IGDELKRYADGLKLNFEF-LAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGA 351
+ + L ++A +K+ F+ + K+ E L K I +GE V +L + + G
Sbjct: 279 VKENLTQFAAEMKIRFQIEFVLMKTFEMLSFKAIRFVEGERTV---VLISPAIFRRLSG- 334
Query: 352 LNSVLQRLHQLSPKVVMLVEQDS----SHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYD 407
+ + L ++SPKVV+ V+ + + +G F F+ AL +Y+ + +SLDA P D
Sbjct: 335 ITDFVNNLRRVSPKVVVFVDSEGWTEIAGSGSF-RREFVSALEFYTMVLESLDAAAPPGD 393
Query: 408 TKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPIKML--MQAKQ 465
+ +E F +I V A RH WR AG + + + QA+
Sbjct: 394 LVKKIVEAFVLRPKISAAVET---AADRRHTGEMTWREAFCAAGMRPIQLSQFADFQAEC 450
Query: 466 WLRKVQTCEGYTIIEEKGCLVLGWKSKPIIAASCWK 501
L K Q G+ + + +G LVL W + ++A S W+
Sbjct: 451 LLEKAQV-RGFHVAKRQGELVLCWHGRALVATSAWR 485
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 272 (100.8 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 100/380 (26%), Positives = 174/380 (45%)
Query: 131 LVQQLIACAEAVACRDKAHASALLSELRVN-ALVFGTSFQRVASCFVQGLSDRLALV-QP 188
+ +QL+ AE + D A +L+ L + G +R A F + L++ L V Q
Sbjct: 205 ITEQLVKAAEVIES-DTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALNNLLHNVSQT 263
Query: 189 LGAVGVVGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASILEAFEGESLVHVVDL 248
L ++ A +S S EI P +QF +F +N ++LE+F G +H++D
Sbjct: 264 LNPYSLIFKIAAY--------KSFS---EISPVLQFANFTSNQALLESFHGFHRLHIIDF 312
Query: 249 GMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKIT---GVGNCSE-RLGEIGDELKRYADGL 304
+G +G QW SLMQ LV R P LKIT N + LG D LK +A +
Sbjct: 313 D--IG--YGGQWASLMQELVLRDNAAPLSLKITVFASPANHDQLELGFTQDNLKHFASEI 368
Query: 305 KLNFEFLAVEKSLETLQAKDI-NVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLS 363
++ + + SL+ L + N + E + +N + S L VL+ + LS
Sbjct: 369 NISLDIQVL--SLDLLGSISWPNSSEKEAVAVN-------ISAASFSHLPLVLRFVKHLS 419
Query: 364 PKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIK 423
P +++ ++ F + +LH ++A+F+SLDA+ D + KIE+F EI+
Sbjct: 420 PTIIVCSDRGCERTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQ-KIERFLIQPEIE 478
Query: 424 NIVSCEGPARVERHERVDQWRRRMSRAGFQSVPIKMLMQAK-QWLRKVQTCEGYTIIEEK 482
+V + +ER W+ + GF V +++ + L + G+ + ++
Sbjct: 479 KLV-LDRSRPIERPMMT--WQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKH 535
Query: 483 GCLVLGWKSKPIIAASCWKC 502
L+L W+ ++ S W+C
Sbjct: 536 NSLLLCWQRTELVGVSAWRC 555
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 263 (97.6 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 103/390 (26%), Positives = 168/390 (43%)
Query: 125 NGDGMKLVQQLIACAEAVACRDKAH-ASALLSELRVNALVF-GTSFQRVASCFVQGLSDR 182
NG G ++ LI + + D+ H A +LS+L G QR A F + L
Sbjct: 94 NG-GFDYIEDLIRVVDCIES-DELHLAHVVLSQLNQRLQTSAGRPLQRAAFYFKEALGSL 151
Query: 183 LALVQPLGAVGVVGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASILEAFEGES- 241
L G + S + ++ ++ I P F HF AN +IL++ +S
Sbjct: 152 LT--------GTNRNQLFSWSDIVQKIRAIKEFSGISPIPLFSHFTANQAILDSLSSQSS 203
Query: 242 --LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGV--GNCSERLGEIGDEL 297
VHVVD +G G Q+ SLM+ + +S L++T V +C+ + + L
Sbjct: 204 SPFVHVVDF--EIGF--GGQYASLMREIAEKSAN-GGFLRVTAVVAEDCAVETRLVKENL 258
Query: 298 KRYADGLKLNFEF-LAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVL 356
++A +K+ F+ + K+ E L K I DGE V +L + + G V
Sbjct: 259 TQFAAEMKIRFQIEFVLMKTFEILSFKAIRFVDGERTV---VLISPAIFRRVIGIAEFV- 314
Query: 357 QRLHQLSPKVVMLVEQDS---SHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKI 413
L ++SP VV+ V+ + + F F+ A +Y+ + +SLDA P D + +
Sbjct: 315 NNLGRVSPNVVVFVDSEGCTETAGSGSFRREFVSAFEFYTMVLESLDAAAPPGDLVKKIV 374
Query: 414 EQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPIKML--MQAKQWLRKVQ 471
E F +I V A R WR + AG + V + QA+ L K Q
Sbjct: 375 ETFLLRPKISAAVET---AANRRSAGQMTWREMLCAAGMRPVQLSQFADFQAECLLEKAQ 431
Query: 472 TCEGYTIIEEKGCLVLGWKSKPIIAASCWK 501
G+ + + +G LVL W + ++A S W+
Sbjct: 432 V-RGFHVAKRQGELVLCWHGRALVATSAWR 460
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 254 (94.5 bits), Expect = 9.3e-19, P = 9.3e-19
Identities = 89/304 (29%), Positives = 144/304 (47%)
Query: 217 EICPQIQFGHFVANASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLV---NRSGK 273
E P +QF +F AN +ILE+FEG +H+VD +G +G QW SL+Q L NRS
Sbjct: 335 ETSPFLQFVNFTANQTILESFEGFDRIHIVDFD--IG--YGGQWASLIQELAGKRNRSSS 390
Query: 274 VPKRLKITGVGNCSERLGEIG-----DELKRYAD--GLKLNFEFLAVEKSLE-TLQAKDI 325
P LKIT + S E + L+ +A G+ E L +E L T +
Sbjct: 391 APS-LKITAFASPSTVSDEFELRFTEENLRSFAGETGVSFEIELLNMEILLNPTYWPLSL 449
Query: 326 -NVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLVEQ--DSSHNGPFFL 382
+ E + +N L + +V G L +L+ L Q+SP VV+ ++ D +++ PF
Sbjct: 450 FRSSEKEAIAVN--LPISSMVS---GYLPLILRFLKQISPNVVVCSDRSCDRNNDAPFPN 504
Query: 383 GRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQ 442
G + AL YY+++ +SLD+ IE+F I+ +++ R ER
Sbjct: 505 G-VINALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKLLT----NRYRWMERSPP 559
Query: 443 WRRRMSRAGFQSVPIKMLMQAK-QWLRKVQTCEGYTIIEEKGC---LVLGWKSKPIIAAS 498
WR + GF V + + + ++L + G+ + + + LVL W+ K ++ S
Sbjct: 560 WRSLFGQCGFTPVTLSQTAETQAEYLLQRNPMRGFHLEKRQSSSPSLVLCWQRKELVTVS 619
Query: 499 CWKC 502
WKC
Sbjct: 620 AWKC 623
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 244 (91.0 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 108/406 (26%), Positives = 185/406 (45%)
Query: 126 GDGMK-LVQQLIACAEAVAC---RDKAH---ASALLSELR--VNALVFGTS-FQRVASCF 175
GD +++QL AE + + H A +L+ L +N S FQR AS
Sbjct: 262 GDDQSVIIEQLFNAAELIGTTGNNNGDHTVLAQGILARLNHHLNTSSNHKSPFQRAASHI 321
Query: 176 VQGLSDRLALVQPLGAVGVVGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASILE 235
+ L L+L+ + ++ + I + R S E P +QF +F AN SILE
Sbjct: 322 AEAL---LSLIHNESSPPLITPENLILRIAAYRSFS-----ETSPFLQFVNFTANQSILE 373
Query: 236 AFE--GESLVHVVDLGMTLGLPHGRQWHSLMQSLVNR-SGKVPKR---LKITGVG----N 285
+ G +H++D + G +G QW SLMQ L + G+ R LK+T
Sbjct: 374 SCNESGFDRIHIIDFDV--G--YGGQWSSLMQELASGVGGRRRNRASSLKLTVFAPPPST 429
Query: 286 CSER--LGEIGDELKRYADGLKLNFEF--LAVEKSLETLQ-AKDINVEDGEVLVMNSILE 340
S+ L + LK +A +K+ FE L+VE L + + E + +N L
Sbjct: 430 VSDEFELRFTEENLKTFAGEVKIPFEIELLSVELLLNPAYWPLSLRSSEKEAIAVN--LP 487
Query: 341 LHCVVKESRGALNSVLQRLHQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLD 400
++ V G L +L+ L QLSP +V+ ++ N F + +L Y++++ +SLD
Sbjct: 488 VNSVAS---GYLPLILRFLKQLSPNIVVCSDRGCDRNDAPFPNAVIHSLQYHTSLLESLD 544
Query: 401 AMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERH---ERVDQWRRRMSRAGFQSVPI 457
A + D+ IE+F+ I+ ++ ++RH ER WR ++ GF +
Sbjct: 545 ANQNQDDSS---IERFWVQPSIEKLL-------MKRHRWIERSPPWRILFTQCGFSPASL 594
Query: 458 KMLMQAK-QWLRKVQTCEGYTIIEEKGCLVLGWKSKPIIAASCWKC 502
+ +A+ + L + G+ + + + LV+ W+ K ++ S WKC
Sbjct: 595 SQMAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQRKELVTVSAWKC 640
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 206 (77.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 96/401 (23%), Positives = 180/401 (44%)
Query: 122 EEGNGDGMKLVQQLIACAEAVACRDKA---HASALLSELRVNALVFGTSFQRVASCFVQG 178
++GN +G + L CA A+ + + H +LSEL ++ G + +R+A+ ++
Sbjct: 136 KDGNKEGRWAEKLLNPCALAITASNSSRVQHYLCVLSELASSS---GDANRRLAAFGLRA 192
Query: 179 LSDRLALVQPLGAVGVVGSAAKSMAITSERDESLSLVYEICPQIQFGHFVANASILEAF- 237
L L+ + V + A + ++ +L YE+ P + +AN++IL+
Sbjct: 193 LQHHLSSSSVSSSFWPVFTFASAEVKMFQK--TLLKFYEVSPWFALPNNMANSAILQILA 250
Query: 238 ---EGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERL---- 290
+ + +H++D+G++ HG QW +L+++L R P R++IT + + + +
Sbjct: 251 QDPKDKKDLHIIDIGVS----HGMQWPTLLEALSCRLEGPPPRVRITVISDLTADIPFSV 306
Query: 291 ---G-EIGDELKRYADGLKLNFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVK 346
G G +L +A LK+N + ++K LQ I+ E L++ + LH +
Sbjct: 307 GPPGYNYGSQLLGFARSLKINLQISVLDK----LQL--IDTSPHENLIVCAQFRLHHLKH 360
Query: 347 ESRGALNSVLQRLHQLSPKVVMLVEQDS--SHNGPFFLGRFMEALHYYSAIFDSLDAMLP 404
L+ + L PK V+L E + S + F G F + L Y DS +
Sbjct: 361 SINDERGETLKAVRSLRPKGVVLCENNGECSSSADFAAG-FSKKLEYVWKFLDSTSSGFK 419
Query: 405 KYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGF--QSVPIKMLMQ 462
+ +++ K+ + E K +++ G + +E ++W RM AGF ++ +
Sbjct: 420 EENSEERKLME---GEATKVLMNA-G----DMNEGKEKWYERMREAGFFVEAFEEDAVDG 471
Query: 463 AKQWLRKVQTCEGYTIIEEKGCLVLG--WKSKPIIAASCWK 501
AK LRK + I E G G WK + + S WK
Sbjct: 472 AKSLLRKYDN--NWEIRMEDGDTFAGLMWKGEAVSFCSLWK 510
>UNIPROTKB|Q1AHE4 [details] [associations]
symbol:SCL "SCARECROW-like protein" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF03514 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:DQ087265 UniGene:Les.23827 Uniprot:Q1AHE4
Length = 71
Score = 146 (56.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 26/70 (37%), Positives = 44/70 (62%)
Query: 433 RVERHERVDQWRRRMSRAGFQSVPIKMLMQAKQWLRKVQTC--EGYTIIEEKGCLVLGWK 490
RVERHE + +W+ R + AGF P+ + + ++ + C E YT++E+ G ++LGWK
Sbjct: 3 RVERHELLGKWKLRFTMAGFHQYPLSSYVNSV--IKSLMRCYSEHYTLVEKDGAMLLGWK 60
Query: 491 SKPIIAASCW 500
+ +I+AS W
Sbjct: 61 KRNLISASAW 70
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 133 (51.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 45/158 (28%), Positives = 79/158 (50%)
Query: 292 EIGDELKRYADGLKLNFEFLAVEKSL-ETLQA--KDINVED---GEVLVMNSILELHCVV 345
E+G +L +A + EF + S + L + + + ++ E LV+N + LH +
Sbjct: 45 ELGSKLVNFATTRNVAMEFRIISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHYIP 104
Query: 346 KESRGA-LNSV-LQRLHQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAML 403
E + L SV L+ L L+P +V L+++DS F+ R +Y +D+ + L
Sbjct: 105 DEILTSNLRSVFLKELRDLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEMFL 164
Query: 404 PKYDTKRAKIEQFYFAE---EIKNIVSCEGPARVERHE 438
T+ ++ Q+Y A+ +I N+V+ EG RVER E
Sbjct: 165 ----TRGSEQRQWYEADISWKIDNVVAKEGAERVERLE 198
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 503 470 0.00098 118 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 620 (66 KB)
Total size of DFA: 300 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.09u 0.10s 37.19t Elapsed: 00:00:02
Total cpu time: 37.10u 0.10s 37.20t Elapsed: 00:00:02
Start: Mon May 20 20:24:58 2013 End: Mon May 20 20:25:00 2013