Query 037028
Match_columns 503
No_of_seqs 162 out of 695
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 13:05:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037028.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037028hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 97.5 0.0068 2.3E-07 59.2 18.8 168 242-457 71-242 (261)
2 3dtn_A Putative methyltransfer 96.3 0.022 7.6E-07 53.1 10.9 176 231-457 33-211 (234)
3 3bkx_A SAM-dependent methyltra 95.1 0.94 3.2E-05 42.9 16.9 122 232-379 34-167 (275)
4 3dp7_A SAM-dependent methyltra 94.7 0.42 1.4E-05 48.3 14.0 117 232-374 170-290 (363)
5 3ujc_A Phosphoethanolamine N-m 94.4 0.24 8.3E-06 46.5 10.8 125 220-372 34-160 (266)
6 1vl5_A Unknown conserved prote 94.4 0.59 2E-05 44.1 13.4 111 232-372 28-141 (260)
7 2r3s_A Uncharacterized protein 94.2 1.2 4.2E-05 43.6 15.8 117 231-375 153-275 (335)
8 2ip2_A Probable phenazine-spec 94.0 0.74 2.5E-05 45.4 13.9 115 231-373 158-274 (334)
9 3dh0_A SAM dependent methyltra 94.0 1.9 6.5E-05 39.2 15.8 113 231-370 27-141 (219)
10 3htx_A HEN1; HEN1, small RNA m 94.0 0.29 1E-05 55.9 11.9 124 231-375 711-838 (950)
11 1x19_A CRTF-related protein; m 93.9 1.1 3.9E-05 44.7 15.1 117 229-374 178-298 (359)
12 2aot_A HMT, histamine N-methyl 93.8 1.5 5.3E-05 42.3 15.5 117 240-369 51-169 (292)
13 4a6d_A Hydroxyindole O-methylt 93.7 1 3.4E-05 45.5 14.4 160 230-457 168-331 (353)
14 3mcz_A O-methyltransferase; ad 93.3 2.5 8.5E-05 41.9 16.4 117 232-374 169-290 (352)
15 3sm3_A SAM-dependent methyltra 93.0 0.53 1.8E-05 43.1 10.2 106 242-374 31-144 (235)
16 1xxl_A YCGJ protein; structura 92.9 4.2 0.00014 37.8 16.5 113 231-373 11-126 (239)
17 3f4k_A Putative methyltransfer 92.5 1.8 6.3E-05 40.3 13.3 128 215-372 19-151 (257)
18 3gwz_A MMCR; methyltransferase 92.5 2 7E-05 43.3 14.5 117 230-375 191-311 (369)
19 3mgg_A Methyltransferase; NYSG 92.2 1.7 5.9E-05 41.1 12.9 105 241-373 37-144 (276)
20 3jwh_A HEN1; methyltransferase 92.0 1.5 5E-05 40.2 11.7 115 233-373 21-142 (217)
21 1qzz_A RDMB, aclacinomycin-10- 91.9 2.2 7.4E-05 42.6 13.9 113 231-372 172-288 (374)
22 3i53_A O-methyltransferase; CO 91.8 2.6 9E-05 41.5 14.2 114 232-374 160-277 (332)
23 1tw3_A COMT, carminomycin 4-O- 91.4 3.1 0.00011 41.3 14.3 114 231-373 173-290 (360)
24 1xtp_A LMAJ004091AAA; SGPP, st 91.3 1.5 5.2E-05 40.7 11.2 113 231-371 83-196 (254)
25 3lcv_B Sisomicin-gentamicin re 91.3 1.5 5.1E-05 43.7 11.4 132 232-399 125-258 (281)
26 3dlc_A Putative S-adenosyl-L-m 91.1 1.9 6.5E-05 38.7 11.3 112 230-371 33-147 (219)
27 3hem_A Cyclopropane-fatty-acyl 91.0 1.5 5.1E-05 42.5 11.2 113 231-370 62-181 (302)
28 3h2b_A SAM-dependent methyltra 90.7 1.6 5.5E-05 39.3 10.4 97 242-370 42-139 (203)
29 3jwg_A HEN1, methyltransferase 90.4 1.2 4.2E-05 40.6 9.5 119 232-376 20-145 (219)
30 3vc1_A Geranyl diphosphate 2-C 90.2 2.3 7.8E-05 41.5 11.8 109 231-369 106-218 (312)
31 3lst_A CALO1 methyltransferase 89.2 3.8 0.00013 40.8 12.7 112 230-373 173-288 (348)
32 3e23_A Uncharacterized protein 89.0 4.3 0.00015 36.6 12.0 96 242-371 44-140 (211)
33 3lcc_A Putative methyl chlorid 89.0 11 0.00037 34.7 14.9 101 243-370 68-169 (235)
34 3reo_A (ISO)eugenol O-methyltr 88.7 2.5 8.5E-05 42.7 11.1 109 231-374 192-303 (368)
35 3m70_A Tellurite resistance pr 88.0 4.9 0.00017 38.3 12.1 111 231-370 110-221 (286)
36 4fsd_A Arsenic methyltransfera 87.8 5.9 0.0002 40.1 13.2 116 241-374 83-206 (383)
37 3l8d_A Methyltransferase; stru 87.3 8.6 0.00029 35.2 13.0 98 242-371 54-152 (242)
38 1kpg_A CFA synthase;, cyclopro 86.4 4.6 0.00016 38.4 11.0 111 232-372 55-169 (287)
39 3ocj_A Putative exported prote 86.1 8.6 0.0003 37.2 12.9 105 241-370 118-225 (305)
40 3kkz_A Uncharacterized protein 85.5 8.5 0.00029 36.2 12.2 129 214-372 18-151 (267)
41 3hnr_A Probable methyltransfer 85.2 2.7 9.4E-05 38.1 8.3 109 230-370 34-143 (220)
42 3fzg_A 16S rRNA methylase; met 84.8 2.6 8.8E-05 40.0 8.0 101 244-372 52-152 (200)
43 3p9c_A Caffeic acid O-methyltr 84.2 3.1 0.00011 42.0 8.9 108 231-373 190-300 (364)
44 3ccf_A Cyclopropane-fatty-acyl 83.8 11 0.00037 35.8 12.2 106 231-371 47-153 (279)
45 3frh_A 16S rRNA methylase; met 83.6 5.9 0.0002 38.9 10.2 101 242-372 106-206 (253)
46 2qe6_A Uncharacterized protein 82.9 33 0.0011 33.0 15.4 140 213-374 45-199 (274)
47 3dli_A Methyltransferase; PSI- 82.8 2.5 8.4E-05 39.3 7.0 94 242-370 42-138 (240)
48 3g5l_A Putative S-adenosylmeth 82.3 12 0.00039 34.8 11.5 112 229-371 32-144 (253)
49 2o57_A Putative sarcosine dime 82.0 7.7 0.00026 37.1 10.4 115 231-374 68-190 (297)
50 2xvm_A Tellurite resistance pr 81.8 25 0.00085 30.8 13.1 110 230-368 21-132 (199)
51 3mq2_A 16S rRNA methyltransfer 81.1 5.2 0.00018 36.4 8.4 115 234-371 20-139 (218)
52 3ofk_A Nodulation protein S; N 81.0 8.6 0.00029 34.7 9.9 109 233-370 43-152 (216)
53 4dcm_A Ribosomal RNA large sub 80.6 7.7 0.00026 39.5 10.3 124 228-371 209-333 (375)
54 2fk8_A Methoxy mycolic acid sy 80.5 11 0.00039 36.4 11.1 113 231-373 80-196 (318)
55 4htf_A S-adenosylmethionine-de 80.2 14 0.00047 35.1 11.5 109 233-371 61-172 (285)
56 3thr_A Glycine N-methyltransfe 80.1 4.1 0.00014 38.8 7.7 123 231-371 47-174 (293)
57 3uwp_A Histone-lysine N-methyl 79.9 6.4 0.00022 41.5 9.5 120 231-370 163-286 (438)
58 3g5t_A Trans-aconitate 3-methy 79.7 13 0.00044 35.7 11.1 111 240-370 35-147 (299)
59 3giw_A Protein of unknown func 79.6 12 0.00042 37.0 11.0 146 209-373 42-202 (277)
60 1nkv_A Hypothetical protein YJ 79.3 12 0.0004 34.7 10.4 112 231-372 26-141 (256)
61 3bgv_A MRNA CAP guanine-N7 met 79.3 23 0.00078 34.2 12.9 114 241-370 34-153 (313)
62 1fp1_D Isoliquiritigenin 2'-O- 79.2 7.9 0.00027 38.8 9.8 108 231-373 198-308 (372)
63 3bus_A REBM, methyltransferase 78.4 13 0.00043 34.9 10.4 114 231-373 51-168 (273)
64 3p9n_A Possible methyltransfer 76.9 13 0.00044 33.0 9.6 110 242-377 45-158 (189)
65 2yqz_A Hypothetical protein TT 76.4 28 0.00095 32.0 12.1 101 241-371 39-140 (263)
66 2p7i_A Hypothetical protein; p 75.9 11 0.00038 34.2 9.0 94 243-370 44-139 (250)
67 3cgg_A SAM-dependent methyltra 75.4 24 0.00082 30.6 10.8 107 231-371 37-146 (195)
68 3p2e_A 16S rRNA methylase; met 74.6 9.1 0.00031 35.8 8.2 112 241-370 24-137 (225)
69 3r0q_C Probable protein argini 74.4 17 0.00059 36.7 10.8 113 231-371 53-168 (376)
70 3g2m_A PCZA361.24; SAM-depende 74.3 9.7 0.00033 36.6 8.5 115 231-371 73-189 (299)
71 1ri5_A MRNA capping enzyme; me 74.2 23 0.00077 33.4 11.0 109 241-371 64-173 (298)
72 3ou2_A SAM-dependent methyltra 74.2 22 0.00075 31.6 10.5 111 230-373 34-148 (218)
73 1y8c_A S-adenosylmethionine-de 74.2 38 0.0013 30.6 12.2 103 241-371 37-141 (246)
74 2vdw_A Vaccinia virus capping 73.9 19 0.00066 35.3 10.7 111 242-370 49-167 (302)
75 1ve3_A Hypothetical protein PH 73.7 25 0.00086 31.5 10.8 101 242-370 39-140 (227)
76 3i9f_A Putative type 11 methyl 73.6 20 0.00069 30.8 9.7 102 232-370 8-110 (170)
77 2ex4_A Adrenal gland protein A 73.2 32 0.0011 31.6 11.6 119 229-373 62-187 (241)
78 2yxd_A Probable cobalt-precorr 72.6 14 0.00049 31.8 8.5 102 233-370 27-129 (183)
79 1dus_A MJ0882; hypothetical pr 72.2 30 0.001 29.9 10.5 114 229-372 40-157 (194)
80 1wzn_A SAM-dependent methyltra 72.0 41 0.0014 30.9 12.0 111 233-372 33-145 (252)
81 2pjd_A Ribosomal RNA small sub 71.7 9.5 0.00033 37.9 7.9 118 229-371 184-302 (343)
82 1fp2_A Isoflavone O-methyltran 69.5 22 0.00076 35.1 10.1 98 241-373 188-290 (352)
83 3pfg_A N-methyltransferase; N, 67.9 14 0.00049 34.4 7.9 98 242-371 51-150 (263)
84 2y1w_A Histone-arginine methyl 67.0 28 0.00097 34.6 10.3 114 230-371 39-154 (348)
85 3u81_A Catechol O-methyltransf 66.6 49 0.0017 30.0 11.2 110 242-374 59-172 (221)
86 1vlm_A SAM-dependent methyltra 65.9 76 0.0026 28.5 12.6 22 437-458 165-186 (219)
87 3iv6_A Putative Zn-dependent a 64.6 15 0.00051 35.8 7.4 53 231-297 35-87 (261)
88 2p8j_A S-adenosylmethionine-de 64.3 38 0.0013 29.9 9.8 102 242-370 24-126 (209)
89 3bkw_A MLL3908 protein, S-aden 64.1 46 0.0016 30.1 10.5 109 231-370 33-142 (243)
90 3dxy_A TRNA (guanine-N(7)-)-me 63.9 23 0.00078 32.9 8.4 115 241-373 34-151 (218)
91 3eey_A Putative rRNA methylase 63.5 36 0.0012 30.0 9.4 108 243-370 24-137 (197)
92 2esr_A Methyltransferase; stru 62.8 35 0.0012 29.5 9.0 107 242-377 32-143 (177)
93 1zg3_A Isoflavanone 4'-O-methy 60.8 29 0.001 34.3 9.0 107 232-373 182-295 (358)
94 3e05_A Precorrin-6Y C5,15-meth 59.7 85 0.0029 27.8 11.3 56 232-299 31-86 (204)
95 2zfu_A Nucleomethylin, cerebra 59.5 44 0.0015 29.9 9.3 19 439-457 158-176 (215)
96 3njr_A Precorrin-6Y methylase; 59.4 69 0.0024 29.0 10.7 62 232-311 46-109 (204)
97 3e8s_A Putative SAM dependent 59.4 37 0.0013 30.1 8.8 55 228-296 39-93 (227)
98 3fut_A Dimethyladenosine trans 58.8 22 0.00075 34.7 7.5 101 216-341 17-122 (271)
99 3d2l_A SAM-dependent methyltra 58.8 1E+02 0.0034 27.8 11.7 101 243-372 35-137 (243)
100 3hm2_A Precorrin-6Y C5,15-meth 58.7 74 0.0025 27.1 10.3 60 232-307 16-75 (178)
101 4e2x_A TCAB9; kijanose, tetron 58.1 13 0.00046 37.6 6.1 109 232-371 98-207 (416)
102 3lbf_A Protein-L-isoaspartate 57.9 68 0.0023 28.5 10.3 104 232-370 68-172 (210)
103 2fpo_A Methylase YHHF; structu 57.6 31 0.001 31.2 7.9 103 243-374 56-162 (202)
104 3q7e_A Protein arginine N-meth 57.6 37 0.0013 33.8 9.2 104 242-372 67-173 (349)
105 1uwv_A 23S rRNA (uracil-5-)-me 57.2 64 0.0022 33.2 11.1 109 233-371 278-388 (433)
106 3cc8_A Putative methyltransfer 57.1 42 0.0014 29.8 8.7 106 230-370 22-128 (230)
107 3g07_A 7SK snRNA methylphospha 56.7 19 0.00065 34.7 6.6 56 233-300 36-93 (292)
108 2fyt_A Protein arginine N-meth 56.3 48 0.0016 32.9 9.7 111 231-369 54-168 (340)
109 2g72_A Phenylethanolamine N-me 55.9 50 0.0017 31.3 9.4 45 241-298 71-115 (289)
110 1zq9_A Probable dimethyladenos 55.0 39 0.0013 32.6 8.6 85 231-340 18-104 (285)
111 3ege_A Putative methyltransfer 54.7 17 0.00057 34.2 5.8 112 231-378 24-137 (261)
112 3b3j_A Histone-arginine methyl 54.4 29 0.001 36.5 8.1 114 231-372 148-263 (480)
113 2avn_A Ubiquinone/menaquinone 53.6 71 0.0024 29.7 10.0 97 241-371 54-151 (260)
114 2gs9_A Hypothetical protein TT 53.4 53 0.0018 29.2 8.7 104 233-373 29-134 (211)
115 1g6q_1 HnRNP arginine N-methyl 51.8 63 0.0022 31.7 9.7 102 242-370 39-143 (328)
116 1nv8_A HEMK protein; class I a 51.8 50 0.0017 31.9 8.8 111 243-374 125-251 (284)
117 2qn6_B Translation initiation 51.0 19 0.00066 29.9 4.8 38 273-311 50-91 (93)
118 2p35_A Trans-aconitate 2-methy 50.8 69 0.0023 29.3 9.3 106 232-370 24-130 (259)
119 1ws6_A Methyltransferase; stru 49.4 42 0.0014 28.5 7.0 106 243-375 43-150 (171)
120 3mti_A RRNA methylase; SAM-dep 49.2 90 0.0031 27.0 9.4 43 243-299 24-66 (185)
121 3gru_A Dimethyladenosine trans 49.1 61 0.0021 31.9 9.0 100 217-340 21-125 (295)
122 2pxx_A Uncharacterized protein 48.3 76 0.0026 27.8 8.9 45 241-298 42-86 (215)
123 2fhp_A Methylase, putative; al 48.2 76 0.0026 27.3 8.7 108 242-376 45-158 (187)
124 1pjz_A Thiopurine S-methyltran 48.0 95 0.0033 27.8 9.6 103 241-366 22-134 (203)
125 3gu3_A Methyltransferase; alph 47.1 1.9E+02 0.0064 27.2 17.7 106 240-373 21-128 (284)
126 4azs_A Methyltransferase WBDD; 46.8 20 0.00068 38.4 5.4 84 241-347 66-150 (569)
127 3tqs_A Ribosomal RNA small sub 46.4 40 0.0014 32.3 7.1 88 232-340 20-107 (255)
128 3tm4_A TRNA (guanine N2-)-meth 46.3 67 0.0023 32.3 9.0 110 240-370 216-329 (373)
129 2pt6_A Spermidine synthase; tr 46.3 51 0.0017 32.6 8.0 112 242-374 117-232 (321)
130 3ftd_A Dimethyladenosine trans 45.7 1.4E+02 0.0047 28.3 10.7 109 232-373 22-132 (249)
131 1xj5_A Spermidine synthase 1; 45.5 99 0.0034 30.8 10.0 135 242-397 121-257 (334)
132 1wy7_A Hypothetical protein PH 45.4 1.6E+02 0.0054 25.9 11.9 93 241-363 49-141 (207)
133 1zx0_A Guanidinoacetate N-meth 44.9 1.1E+02 0.0038 27.9 9.7 106 241-370 60-168 (236)
134 1iy9_A Spermidine synthase; ro 44.8 81 0.0028 30.2 9.0 134 242-399 76-213 (275)
135 4hc4_A Protein arginine N-meth 44.8 56 0.0019 33.5 8.2 100 244-369 86-186 (376)
136 2h1r_A Dimethyladenosine trans 44.5 95 0.0032 30.1 9.5 86 230-340 31-117 (299)
137 3dmg_A Probable ribosomal RNA 44.5 1.5E+02 0.0052 30.0 11.4 107 241-372 233-340 (381)
138 2fca_A TRNA (guanine-N(7)-)-me 43.1 1.7E+02 0.0057 26.5 10.5 111 241-372 38-153 (213)
139 2kw5_A SLR1183 protein; struct 42.2 1.7E+02 0.0059 25.4 12.8 98 244-371 32-130 (202)
140 2b3t_A Protein methyltransfera 42.1 1.6E+02 0.0056 27.5 10.6 54 241-310 109-163 (276)
141 2gb4_A Thiopurine S-methyltran 41.7 1.9E+02 0.0065 27.2 11.0 105 241-368 68-187 (252)
142 2a14_A Indolethylamine N-methy 41.7 1.6E+02 0.0054 27.5 10.4 47 239-298 53-99 (263)
143 3ggd_A SAM-dependent methyltra 41.6 32 0.0011 31.6 5.3 105 242-373 57-165 (245)
144 2ift_A Putative methylase HI07 41.5 1.5E+02 0.0051 26.4 9.9 106 243-376 55-167 (201)
145 3q87_B N6 adenine specific DNA 41.4 90 0.0031 27.1 8.1 34 244-292 26-59 (170)
146 2ozv_A Hypothetical protein AT 40.5 73 0.0025 30.0 7.8 117 241-372 36-170 (260)
147 2i62_A Nicotinamide N-methyltr 40.3 1.9E+02 0.0065 26.2 10.5 46 239-297 54-99 (265)
148 1yzh_A TRNA (guanine-N(7)-)-me 40.1 2E+02 0.0069 25.6 12.0 113 242-373 42-157 (214)
149 2jjq_A Uncharacterized RNA met 39.6 2.1E+02 0.007 29.5 11.6 95 243-371 292-386 (425)
150 4hg2_A Methyltransferase type 39.0 2.2E+02 0.0075 26.9 11.0 100 244-379 42-143 (257)
151 2o07_A Spermidine synthase; st 38.6 1.4E+02 0.0049 29.0 9.9 135 243-400 97-234 (304)
152 2vdv_E TRNA (guanine-N(7)-)-me 37.3 1.7E+02 0.0059 26.9 9.8 48 241-300 49-96 (246)
153 1dl5_A Protein-L-isoaspartate 35.7 1.9E+02 0.0064 27.9 10.1 109 230-370 64-173 (317)
154 1vbf_A 231AA long hypothetical 34.5 1.3E+02 0.0044 27.0 8.2 104 232-371 61-164 (231)
155 1inl_A Spermidine synthase; be 34.4 1.7E+02 0.0058 28.2 9.5 135 243-400 92-230 (296)
156 3uzu_A Ribosomal RNA small sub 34.2 74 0.0025 30.9 6.8 90 232-340 33-125 (279)
157 3tfw_A Putative O-methyltransf 34.1 1.9E+02 0.0067 26.7 9.6 102 243-371 65-169 (248)
158 3g89_A Ribosomal RNA small sub 33.5 1E+02 0.0034 29.0 7.5 102 240-370 79-182 (249)
159 2i7c_A Spermidine synthase; tr 33.4 1E+02 0.0035 29.6 7.7 111 242-373 79-193 (283)
160 1ne2_A Hypothetical protein TA 33.4 61 0.0021 28.7 5.7 44 241-297 51-94 (200)
161 3tma_A Methyltransferase; thum 33.1 1.5E+02 0.0053 29.0 9.1 113 233-365 195-310 (354)
162 2qm3_A Predicted methyltransfe 32.2 3.4E+02 0.012 26.9 11.6 95 242-365 173-270 (373)
163 3bxo_A N,N-dimethyltransferase 32.1 2.7E+02 0.0092 24.7 10.6 99 241-371 40-140 (239)
164 1l3i_A Precorrin-6Y methyltran 32.1 88 0.003 26.7 6.4 52 233-298 25-76 (192)
165 3adn_A Spermidine synthase; am 30.0 3.4E+02 0.011 26.2 10.9 134 242-400 84-223 (294)
166 4dzr_A Protein-(glutamine-N5) 29.9 61 0.0021 28.4 5.0 53 233-297 21-74 (215)
167 3bwc_A Spermidine synthase; SA 29.8 2.3E+02 0.0078 27.4 9.6 112 242-373 96-211 (304)
168 4a69_A Histone deacetylase 3,; 29.8 19 0.00064 37.2 1.7 26 234-261 155-180 (376)
169 3grz_A L11 mtase, ribosomal pr 28.8 1.1E+02 0.0036 27.1 6.5 67 228-311 45-114 (205)
170 2gpy_A O-methyltransferase; st 28.4 1.9E+02 0.0064 26.1 8.3 101 243-371 56-159 (233)
171 1qam_A ERMC' methyltransferase 26.6 70 0.0024 30.0 5.0 52 232-297 21-72 (244)
172 3ew8_A HD8, histone deacetylas 26.3 23 0.0008 36.7 1.7 26 234-261 163-188 (388)
173 3m33_A Uncharacterized protein 25.5 3.6E+02 0.012 24.1 11.2 41 242-296 49-89 (226)
174 3max_A HD2, histone deacetylas 25.5 25 0.00085 36.2 1.7 26 234-261 155-180 (367)
175 1mjf_A Spermidine synthase; sp 25.3 1.2E+02 0.0043 28.9 6.7 131 243-399 77-217 (281)
176 2ipx_A RRNA 2'-O-methyltransfe 25.2 1.6E+02 0.0054 26.7 7.1 101 242-371 78-181 (233)
177 1u2z_A Histone-lysine N-methyl 24.9 1.9E+02 0.0065 30.1 8.4 118 231-370 232-357 (433)
178 2ksn_A Ubiquitin domain-contai 24.8 86 0.0029 27.9 4.8 37 130-167 57-93 (137)
179 3ntv_A MW1564 protein; rossman 24.4 2.4E+02 0.0083 25.6 8.3 101 242-371 72-175 (232)
180 1o54_A SAM-dependent O-methylt 23.7 3.2E+02 0.011 25.4 9.2 57 232-299 103-159 (277)
181 3a27_A TYW2, uncharacterized p 22.9 2.9E+02 0.01 26.0 8.8 95 244-370 122-217 (272)
182 2yxe_A Protein-L-isoaspartate 22.8 3.9E+02 0.013 23.4 9.9 57 232-299 68-124 (215)
183 2kl8_A OR15; structural genomi 22.6 1.2E+02 0.0039 23.8 4.6 35 276-312 42-76 (85)
184 2frn_A Hypothetical protein PH 22.5 3.1E+02 0.011 25.9 8.9 51 244-311 128-180 (278)
185 3tva_A Xylose isomerase domain 21.8 84 0.0029 29.5 4.6 52 351-402 239-290 (290)
186 3ckk_A TRNA (guanine-N(7)-)-me 21.6 1.3E+02 0.0046 27.9 5.9 50 239-300 44-93 (235)
187 1r18_A Protein-L-isoaspartate( 21.2 1.9E+02 0.0066 26.0 6.8 53 242-300 85-137 (227)
188 2yvl_A TRMI protein, hypotheti 21.1 3.8E+02 0.013 23.9 8.9 54 232-299 82-135 (248)
189 4hhu_A OR280; engineered prote 21.0 95 0.0032 27.1 4.2 40 277-318 125-164 (170)
190 3men_A Acetylpolyamine aminohy 20.6 35 0.0012 35.0 1.7 24 236-261 200-223 (362)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.47 E-value=0.0068 Score=59.25 Aligned_cols=168 Identities=18% Similarity=0.295 Sum_probs=90.6
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccC
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQ 321 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~ 321 (503)
.-+|+|+|.|. | .+...|+.+-+ +| ..+||||+.+...++.+.+++.++- ...+++|. ..++.++.
T Consensus 71 ~~~vLDlGcGt----G----~~~~~la~~~~-~~-~~~v~gvD~s~~ml~~A~~~~~~~~--~~~~v~~~--~~D~~~~~ 136 (261)
T 4gek_A 71 GTQVYDLGCSL----G----AATLSVRRNIH-HD-NCKIIAIDNSPAMIERCRRHIDAYK--APTPVDVI--EGDIRDIA 136 (261)
T ss_dssp TCEEEEETCTT----T----HHHHHHHHTCC-SS-SCEEEEEESCHHHHHHHHHHHHTSC--CSSCEEEE--ESCTTTCC
T ss_pred CCEEEEEeCCC----C----HHHHHHHHhcC-CC-CCEEEEEECCHHHHHHHHHHHHhhc--cCceEEEe--eccccccc
Confidence 34799999643 3 34455666543 34 5899999999888888877765432 22345553 23444433
Q ss_pred cccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCc-EEEEEeecCCCCCCchHHHHHHHHHHHHHHHhhh
Q 037028 322 AKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPK-VVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSL 399 (503)
Q Consensus 322 ~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pk-vvvlvE~ea~~ns~~F~~RF~eAL~yYsAlFDSL 399 (503)
. .+-.+++ +.+.||++..+ ....+|+.| +.|+|. ++++.|.-... .+.+...+.+....|. ...
T Consensus 137 ~-----~~~d~v~--~~~~l~~~~~~---~~~~~l~~i~~~LkpGG~lii~e~~~~~-~~~~~~~~~~~~~~~~-~~~-- 202 (261)
T 4gek_A 137 I-----ENASMVV--LNFTLQFLEPS---ERQALLDKIYQGLNPGGALVLSEKFSFE-DAKVGELLFNMHHDFK-RAN-- 202 (261)
T ss_dssp C-----CSEEEEE--EESCGGGSCHH---HHHHHHHHHHHHEEEEEEEEEEEEBCCS-SHHHHHHHHHHHHHHH-HHT--
T ss_pred c-----cccccce--eeeeeeecCch---hHhHHHHHHHHHcCCCcEEEEEeccCCC-CHHHHHHHHHHHHHHH-HHc--
Confidence 2 2223444 44567888642 235677776 669997 45555654332 2222222222111111 100
Q ss_pred hccCCCC--CHHHHHHHHHHHHHHHhHhhhcCCCCccccccchhhHHHHHhcCCceeecC
Q 037028 400 DAMLPKY--DTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPI 457 (503)
Q Consensus 400 da~lp~~--~~eR~~iE~~~lg~eI~NiVAcEG~~RvERhE~~~~Wr~rm~~aGF~~~~l 457 (503)
.++.. ...|..+| ++ .+..+.+.++.+|+.|||+.+.+
T Consensus 203 --g~s~~ei~~~~~~l~---------~~---------~~~~s~~~~~~~L~~AGF~~ve~ 242 (261)
T 4gek_A 203 --GYSELEISQKRSMLE---------NV---------MLTDSVETHKARLHKAGFEHSEL 242 (261)
T ss_dssp --TGGGSTTHHHHHHHH---------HH---------CCCBCHHHHHHHHHHHTCSEEEE
T ss_pred --CCCHHHHHHHHhhhc---------cc---------ccCCCHHHHHHHHHHcCCCeEEE
Confidence 01110 11222222 22 23467788999999999988754
No 2
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.35 E-value=0.022 Score=53.09 Aligned_cols=176 Identities=15% Similarity=0.200 Sum_probs=91.9
Q ss_pred HHHHhhhc-CCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEE
Q 037028 231 ASILEAFE-GESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFE 309 (503)
Q Consensus 231 qAILEA~~-g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFe 309 (503)
+.+++.+. ..+.-.|+|+|.+. | .+...|+.+- | ..++|||+.+...++.+.+++ +..+ .++
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~----G----~~~~~l~~~~---~-~~~v~~vD~s~~~~~~a~~~~----~~~~-~~~ 95 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGT----G----LLSAFLMEKY---P-EATFTLVDMSEKMLEIAKNRF----RGNL-KVK 95 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTT----S----HHHHHHHHHC---T-TCEEEEEESCHHHHHHHHHHT----CSCT-TEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCC----C----HHHHHHHHhC---C-CCeEEEEECCHHHHHHHHHhh----ccCC-CEE
Confidence 56666665 44568999999753 3 2344455442 3 479999998877776665554 3333 444
Q ss_pred EeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEE-EeecCCCCCCchHHHHHH
Q 037028 310 FLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVML-VEQDSSHNGPFFLGRFME 387 (503)
Q Consensus 310 F~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvl-vE~ea~~ns~~F~~RF~e 387 (503)
|.. .+++++... +..=+|-|...|||+.+. ....+|+.+ +.|+|.-.++ ++.... +.+.+...+..
T Consensus 96 ~~~--~d~~~~~~~------~~fD~v~~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~~~ 163 (234)
T 3dtn_A 96 YIE--ADYSKYDFE------EKYDMVVSALSIHHLEDE---DKKELYKRSYSILKESGIFINADLVHG-ETAFIENLNKT 163 (234)
T ss_dssp EEE--SCTTTCCCC------SCEEEEEEESCGGGSCHH---HHHHHHHHHHHHEEEEEEEEEEEECBC-SSHHHHHHHHH
T ss_pred EEe--CchhccCCC------CCceEEEEeCccccCCHH---HHHHHHHHHHHhcCCCcEEEEEEecCC-CChhhhhHHHH
Confidence 432 334433321 333344455677988542 223466665 5689974444 444332 23222222222
Q ss_pred HHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHhHhhhcCCCCccccccchhhHHHHHhcCCceeecC
Q 037028 388 ALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPI 457 (503)
Q Consensus 388 AL~yYsAlFDSLda~lp~~~~eR~~iE~~~lg~eI~NiVAcEG~~RvERhE~~~~Wr~rm~~aGF~~~~l 457 (503)
++...+.. ..+ ... ++.+..... ...+.-+.+.|+..|+.|||+.+.+
T Consensus 164 ---~~~~~~~~--~~~---~~~-----------~~~~~~~~~---~~~~~~~~~~~~~ll~~aGF~~v~~ 211 (234)
T 3dtn_A 164 ---IWRQYVEN--SGL---TEE-----------EIAAGYERS---KLDKDIEMNQQLNWLKEAGFRDVSC 211 (234)
T ss_dssp ---HHHHHHHT--SSC---CHH-----------HHHTTC-------CCCCCBHHHHHHHHHHTTCEEEEE
T ss_pred ---HHHHHHHh--cCC---CHH-----------HHHHHHHhc---ccccccCHHHHHHHHHHcCCCceee
Confidence 11111111 111 111 111111111 2345567889999999999998766
No 3
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=95.06 E-value=0.94 Score=42.90 Aligned_cols=122 Identities=17% Similarity=0.192 Sum_probs=67.8
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCch------hHHHHHHHHHHHHhhCC
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSE------RLGEIGDELKRYADGLK 305 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~------~l~~tg~rL~~fA~~lg 305 (503)
.|++.+.-...-+|+|+|.+.| .+...|+.+- | | ..++|||+.+.. .++.+.+++. ..|
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G--------~~~~~l~~~~-g-~-~~~v~gvD~s~~~~~~~~~~~~a~~~~~----~~~ 98 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQG--------DLSAVLADQV-G-S-SGHVTGIDIASPDYGAPLTLGQAWNHLL----AGP 98 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTS--------HHHHHHHHHH-C-T-TCEEEEECSSCTTCCSSSCHHHHHHHHH----TST
T ss_pred HHHHHcCCCCCCEEEEeCCCCC--------HHHHHHHHHh-C-C-CCEEEEEECCccccccHHHHHHHHHHHH----hcC
Confidence 4555554445568999996432 3444555542 2 3 479999998765 6766666553 344
Q ss_pred C--cEEEeeecccccccCcccccccCC--cEEEEEeccccccccccccchHHHHHHHHHhcCC--cEEEEEeecCCCCCC
Q 037028 306 L--NFEFLAVEKSLETLQAKDINVEDG--EVLVMNSILELHCVVKESRGALNSVLQRLHQLSP--KVVMLVEQDSSHNGP 379 (503)
Q Consensus 306 i--pFeF~~v~~~le~l~~~~l~~~~~--EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~P--kvvvlvE~ea~~ns~ 379 (503)
+ ..+|... + ++....+...++ ++|+ |...|||+.+. ..+++.++.|.| ..+++.+.....+.+
T Consensus 99 ~~~~v~~~~~--d--~~~~~~~~~~~~~fD~v~--~~~~l~~~~~~-----~~~~~~~~~l~~~gG~l~~~~~~~~~~~~ 167 (275)
T 3bkx_A 99 LGDRLTVHFN--T--NLSDDLGPIADQHFDRVV--LAHSLWYFASA-----NALALLFKNMAAVCDHVDVAEWSMQPTAL 167 (275)
T ss_dssp TGGGEEEECS--C--CTTTCCGGGTTCCCSEEE--EESCGGGSSCH-----HHHHHHHHHHTTTCSEEEEEEECSSCSSG
T ss_pred CCCceEEEEC--C--hhhhccCCCCCCCEEEEE--EccchhhCCCH-----HHHHHHHHHHhCCCCEEEEEEecCCCCch
Confidence 4 3555432 1 111111222222 4444 44455887542 348888888877 467777766554433
No 4
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=94.71 E-value=0.42 Score=48.30 Aligned_cols=117 Identities=18% Similarity=0.207 Sum_probs=63.3
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC--cEE
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL--NFE 309 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi--pFe 309 (503)
.+++.+.....-+|+|+|.+ .| .+...|+.+- | .+++|+++. ...++.+.++ ++..|+ .++
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G----~G----~~~~~l~~~~---p-~~~~~~~D~-~~~~~~a~~~----~~~~~~~~~v~ 232 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGN----TG----KWATQCVQYN---K-EVEVTIVDL-PQQLEMMRKQ----TAGLSGSERIH 232 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCT----TC----HHHHHHHHHS---T-TCEEEEEEC-HHHHHHHHHH----HTTCTTGGGEE
T ss_pred HHHHHhcccCCCEEEEeCCC----cC----HHHHHHHHhC---C-CCEEEEEeC-HHHHHHHHHH----HHhcCcccceE
Confidence 45555444456799999964 33 2445555542 3 489999997 4455555444 344555 366
Q ss_pred EeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcE-EEEEeecC
Q 037028 310 FLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKV-VMLVEQDS 374 (503)
Q Consensus 310 F~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkv-vvlvE~ea 374 (503)
|..- ++.+.+. .+. ..-++++. ..-||++.++ ....+|+.+ +.|+|.- ++++|.-.
T Consensus 233 ~~~~--d~~~~~~-~~p-~~~D~v~~--~~vlh~~~~~---~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (363)
T 3dp7_A 233 GHGA--NLLDRDV-PFP-TGFDAVWM--SQFLDCFSEE---EVISILTRVAQSIGKDSKVYIMETLW 290 (363)
T ss_dssp EEEC--CCCSSSC-CCC-CCCSEEEE--ESCSTTSCHH---HHHHHHHHHHHHCCTTCEEEEEECCT
T ss_pred EEEc--cccccCC-CCC-CCcCEEEE--echhhhCCHH---HHHHHHHHHHHhcCCCcEEEEEeecc
Confidence 6432 2222110 011 12244444 3456887653 234677766 5689964 55556443
No 5
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=94.41 E-value=0.24 Score=46.46 Aligned_cols=125 Identities=19% Similarity=0.248 Sum_probs=69.3
Q ss_pred cchhhhhHhhhHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHH
Q 037028 220 PQIQFGHFVANASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKR 299 (503)
Q Consensus 220 P~~kfahftANqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~ 299 (503)
.++.-+.....+.+++.+.-...-+|+|+|.+.| .+...|+.+.+ .++|||+.+...++.+.+++..
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G--------~~~~~l~~~~~-----~~v~~vD~s~~~~~~a~~~~~~ 100 (266)
T 3ujc_A 34 NYISSGGLEATKKILSDIELNENSKVLDIGSGLG--------GGCMYINEKYG-----AHTHGIDICSNIVNMANERVSG 100 (266)
T ss_dssp TCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTS--------HHHHHHHHHHC-----CEEEEEESCHHHHHHHHHTCCS
T ss_pred CccccchHHHHHHHHHhcCCCCCCEEEEECCCCC--------HHHHHHHHHcC-----CEEEEEeCCHHHHHHHHHHhhc
Confidence 3444444555677788876666779999996532 34444555432 5899999887666555443322
Q ss_pred HHhhCCCcEEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcE-EEEEee
Q 037028 300 YADGLKLNFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKV-VMLVEQ 372 (503)
Q Consensus 300 fA~~lgipFeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkv-vvlvE~ 372 (503)
. -..+|.. .+++++ ...++..=+|-+...|||+..+ ....+|+.+ +-|+|.- +++++.
T Consensus 101 ~-----~~~~~~~--~d~~~~-----~~~~~~fD~v~~~~~l~~~~~~---~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 101 N-----NKIIFEA--NDILTK-----EFPENNFDLIYSRDAILALSLE---NKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp C-----TTEEEEE--CCTTTC-----CCCTTCEEEEEEESCGGGSCHH---HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-----CCeEEEE--CccccC-----CCCCCcEEEEeHHHHHHhcChH---HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 1 2344432 233332 1223333344455667888431 234566555 5689974 444444
No 6
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=94.37 E-value=0.59 Score=44.15 Aligned_cols=111 Identities=12% Similarity=0.154 Sum_probs=62.7
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc-EEE
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN-FEF 310 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip-FeF 310 (503)
.|++.+.-...-+|+|+|.+. | .+...|+.+. + ++|||+.+...++.+.+++ +..|++ ++|
T Consensus 28 ~l~~~l~~~~~~~vLDiGcG~----G----~~~~~l~~~~--~----~v~gvD~s~~~l~~a~~~~----~~~~~~~v~~ 89 (260)
T 1vl5_A 28 KLMQIAALKGNEEVLDVATGG----G----HVANAFAPFV--K----KVVAFDLTEDILKVARAFI----EGNGHQQVEY 89 (260)
T ss_dssp HHHHHHTCCSCCEEEEETCTT----C----HHHHHHGGGS--S----EEEEEESCHHHHHHHHHHH----HHTTCCSEEE
T ss_pred HHHHHhCCCCCCEEEEEeCCC----C----HHHHHHHHhC--C----EEEEEeCCHHHHHHHHHHH----HhcCCCceEE
Confidence 344444444556899999643 3 2455666652 1 8999998877776666554 334544 555
Q ss_pred eeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE-ee
Q 037028 311 LAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV-EQ 372 (503)
Q Consensus 311 ~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv-E~ 372 (503)
.. .+++++. ..++..=+|-|.+.|||+.+. ..+|+.+ +-|+|.-.+++ +.
T Consensus 90 ~~--~d~~~l~-----~~~~~fD~V~~~~~l~~~~d~-----~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 90 VQ--GDAEQMP-----FTDERFHIVTCRIAAHHFPNP-----ASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp EE--CCC-CCC-----SCTTCEEEEEEESCGGGCSCH-----HHHHHHHHHHEEEEEEEEEEEE
T ss_pred EE--ecHHhCC-----CCCCCEEEEEEhhhhHhcCCH-----HHHHHHHHHHcCCCCEEEEEEc
Confidence 33 2343332 223333344456677888542 3455544 67899754444 44
No 7
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=94.18 E-value=1.2 Score=43.57 Aligned_cols=117 Identities=15% Similarity=0.153 Sum_probs=69.0
Q ss_pred HHHHhhhcC--CceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc-
Q 037028 231 ASILEAFEG--ESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN- 307 (503)
Q Consensus 231 qAILEA~~g--~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip- 307 (503)
+.|++.+.. .+..+|+|+|.+ .| .+...|+.+. | ..++|+++.+ ..++.+.+++.+. |++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G----~G----~~~~~l~~~~---p-~~~~~~~D~~-~~~~~a~~~~~~~----~~~~ 215 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISAS----HG----LFGIAVAQHN---P-NAEIFGVDWA-SVLEVAKENARIQ----GVAS 215 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCT----TC----HHHHHHHHHC---T-TCEEEEEECH-HHHHHHHHHHHHH----TCGG
T ss_pred HHHHHhcccccCCCCEEEEECCC----cC----HHHHHHHHHC---C-CCeEEEEecH-HHHHHHHHHHHhc----CCCc
Confidence 467777765 667899999964 44 2444555543 3 4799999988 7777776666433 443
Q ss_pred -EEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcE-EEEEeecCC
Q 037028 308 -FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKV-VMLVEQDSS 375 (503)
Q Consensus 308 -FeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkv-vvlvE~ea~ 375 (503)
++|... ++.+.. +..+ .=+|-|...||++.++ ....+|+.+ +.|+|.- ++++|....
T Consensus 216 ~v~~~~~--d~~~~~-----~~~~-~D~v~~~~~l~~~~~~---~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 216 RYHTIAG--SAFEVD-----YGND-YDLVLLPNFLHHFDVA---TCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp GEEEEES--CTTTSC-----CCSC-EEEEEEESCGGGSCHH---HHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred ceEEEec--ccccCC-----CCCC-CcEEEEcchhccCCHH---HHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 555432 232221 1122 3344455567887543 234566665 5689975 666665543
No 8
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=94.04 E-value=0.74 Score=45.41 Aligned_cols=115 Identities=14% Similarity=0.197 Sum_probs=63.6
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEE
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEF 310 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF 310 (503)
+.|++.+.-.. .+|+|+|-+ .| .+...|+.+. | .+++|+++. ...++.+.+++.+.- +.-.++|
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G----~G----~~~~~l~~~~---p-~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~ 221 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGG----SG----ELTKAILQAE---P-SARGVMLDR-EGSLGVARDNLSSLL--AGERVSL 221 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCT----TC----HHHHHHHHHC---T-TCEEEEEEC-TTCTHHHHHHTHHHH--HTTSEEE
T ss_pred HHHHHhCCCCC-CEEEEeCCC----ch----HHHHHHHHHC---C-CCEEEEeCc-HHHHHHHHHHHhhcC--CCCcEEE
Confidence 56777764344 899999964 44 2444555542 3 479999998 666766666654432 1112455
Q ss_pred eeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCc-EEEEEeec
Q 037028 311 LAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPK-VVMLVEQD 373 (503)
Q Consensus 311 ~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pk-vvvlvE~e 373 (503)
..- ++.+ + +. ..-++++ +...||+..++ ....+|+.+ +.|+|. .++++|.-
T Consensus 222 ~~~--d~~~--~--~~-~~~D~v~--~~~vl~~~~~~---~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 222 VGG--DMLQ--E--VP-SNGDIYL--LSRIIGDLDEA---ASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp EES--CTTT--C--CC-SSCSEEE--EESCGGGCCHH---HHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred ecC--CCCC--C--CC-CCCCEEE--EchhccCCCHH---HHHHHHHHHHHhcCCCCEEEEEEec
Confidence 432 2222 1 11 1124444 44456877543 234666666 568996 45555644
No 9
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=94.02 E-value=1.9 Score=39.19 Aligned_cols=113 Identities=17% Similarity=0.215 Sum_probs=64.4
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc-EE
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN-FE 309 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip-Fe 309 (503)
+.|++.+.-...-.|+|+|.+. |. +...|+.+. +| ..++|||+.+...++.+.+++.+ .|++ ++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~----G~----~~~~l~~~~--~~-~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~ 91 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGA----GF----YLPYLSKMV--GE-KGKVYAIDVQEEMVNYAWEKVNK----LGLKNVE 91 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTT----CT----THHHHHHHH--TT-TCEEEEEESCHHHHHHHHHHHHH----HTCTTEE
T ss_pred HHHHHHhCCCCCCEEEEEecCC----CH----HHHHHHHHh--CC-CcEEEEEECCHHHHHHHHHHHHH----cCCCcEE
Confidence 5566666555566899999753 32 333444432 23 47999999988777777666543 3443 45
Q ss_pred EeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 310 FLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 310 F~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
|.. .+++++. ..++..=+|-+...|||+.+ ...+|+.+ +.|+|.-.+++
T Consensus 92 ~~~--~d~~~~~-----~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 92 VLK--SEENKIP-----LPDNTVDFIFMAFTFHELSE-----PLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp EEE--CBTTBCS-----SCSSCEEEEEEESCGGGCSS-----HHHHHHHHHHHEEEEEEEEE
T ss_pred EEe--cccccCC-----CCCCCeeEEEeehhhhhcCC-----HHHHHHHHHHHhCCCeEEEE
Confidence 533 2333332 22333334445566788743 23555555 66899744443
No 10
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=94.00 E-value=0.29 Score=55.86 Aligned_cols=124 Identities=16% Similarity=0.229 Sum_probs=75.7
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHH--HhhCCCc-
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRY--ADGLKLN- 307 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~f--A~~lgip- 307 (503)
+.|++.+.....-.|+|+|.|. | .+...|+.+. +| .-+||||+.+...++.+.++|... ++..|++
T Consensus 711 e~LLelL~~~~g~rVLDVGCGT----G----~lai~LAr~g--~p-~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~n 779 (950)
T 3htx_A 711 EYALKHIRESSASTLVDFGCGS----G----SLLDSLLDYP--TS-LQTIIGVDISPKGLARAAKMLHVKLNKEACNVKS 779 (950)
T ss_dssp HHHHHHHHHSCCSEEEEETCSS----S----HHHHHHTSSC--CC-CCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSE
T ss_pred HHHHHHhcccCCCEEEEECCCC----C----HHHHHHHHhC--CC-CCeEEEEECCHHHHHHHHHHhhhccchhhcCCCc
Confidence 3455555544556799999753 3 4556676652 34 479999999988888888888765 2344554
Q ss_pred EEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEEeecCC
Q 037028 308 FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQR-LHQLSPKVVMLVEQDSS 375 (503)
Q Consensus 308 FeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~-Ir~L~PkvvvlvE~ea~ 375 (503)
.+| +..+++++.. ..+..=+|-|...|||+.+. ....+|+. .+-|+|.++++...+.+
T Consensus 780 Vef--iqGDa~dLp~-----~d~sFDlVV~~eVLeHL~dp---~l~~~L~eI~RvLKPG~LIISTPN~e 838 (950)
T 3htx_A 780 ATL--YDGSILEFDS-----RLHDVDIGTCLEVIEHMEED---QACEFGEKVLSLFHPKLLIVSTPNYE 838 (950)
T ss_dssp EEE--EESCTTSCCT-----TSCSCCEEEEESCGGGSCHH---HHHHHHHHHHHTTCCSEEEEEECBGG
T ss_pred eEE--EECchHhCCc-----ccCCeeEEEEeCchhhCChH---HHHHHHHHHHHHcCCCEEEEEecCch
Confidence 344 3344554433 22222233345567998752 23456655 57889997777766643
No 11
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=93.90 E-value=1.1 Score=44.73 Aligned_cols=117 Identities=10% Similarity=0.158 Sum_probs=69.1
Q ss_pred hhHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc-
Q 037028 229 ANASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN- 307 (503)
Q Consensus 229 ANqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip- 307 (503)
..+.|++.+.-.+.-+|+|+|.+ .|. +...|+.+. | .+++|+++. ...++.+.+++.+ .|++
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G----~G~----~~~~l~~~~---p-~~~~~~~D~-~~~~~~a~~~~~~----~~~~~ 240 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGG----IGD----ISAAMLKHF---P-ELDSTILNL-PGAIDLVNENAAE----KGVAD 240 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCT----TCH----HHHHHHHHC---T-TCEEEEEEC-GGGHHHHHHHHHH----TTCTT
T ss_pred hHHHHHHhcCCCCCCEEEEECCc----ccH----HHHHHHHHC---C-CCeEEEEec-HHHHHHHHHHHHh----cCCCC
Confidence 34678888765667799999965 332 444455542 3 589999998 7777777666543 3442
Q ss_pred -EEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCc-EEEEEeecC
Q 037028 308 -FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPK-VVMLVEQDS 374 (503)
Q Consensus 308 -FeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pk-vvvlvE~ea 374 (503)
++|..- ++.+.. +..+++++. ...||++.++ ....+|+.+ +.|+|. .++++|...
T Consensus 241 ~v~~~~~--d~~~~~-----~~~~D~v~~--~~vlh~~~d~---~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 241 RMRGIAV--DIYKES-----YPEADAVLF--CRILYSANEQ---LSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp TEEEEEC--CTTTSC-----CCCCSEEEE--ESCGGGSCHH---HHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred CEEEEeC--ccccCC-----CCCCCEEEE--echhccCCHH---HHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 555432 332221 223355554 3456887653 235667766 467996 445666543
No 12
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=93.80 E-value=1.5 Score=42.33 Aligned_cols=117 Identities=13% Similarity=0.124 Sum_probs=63.2
Q ss_pred CceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccc
Q 037028 240 ESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLET 319 (503)
Q Consensus 240 ~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~ 319 (503)
....+|+|+|.| .|.--..+++.|+.+. |...+.+|||+++.+.++...+++.+...--++.|+|... ..++
T Consensus 51 ~~~~~VLDiG~G----tG~~~~~~l~~l~~~~--~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~--~~~~ 122 (292)
T 2aot_A 51 KSEIKILSIGGG----AGEIDLQILSKVQAQY--PGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKE--TSSE 122 (292)
T ss_dssp CSEEEEEEETCT----TSHHHHHHHHHHHHHS--TTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECS--CHHH
T ss_pred CCCCeEEEEcCC----CCHHHHHHHHHHHhhC--CCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEec--chhh
Confidence 456799999964 4432224677776552 2212345999999887877766653211111345555432 2332
Q ss_pred cCccc-ccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEE
Q 037028 320 LQAKD-INVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVML 369 (503)
Q Consensus 320 l~~~~-l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvl 369 (503)
+.... ....++..=+|-|...|||+.+ ...+|+.+ |-|+|.-.++
T Consensus 123 ~~~~~~~~~~~~~fD~V~~~~~l~~~~d-----~~~~l~~~~r~LkpgG~l~ 169 (292)
T 2aot_A 123 YQSRMLEKKELQKWDFIHMIQMLYYVKD-----IPATLKFFHSLLGTNAKML 169 (292)
T ss_dssp HHHHHHTTTCCCCEEEEEEESCGGGCSC-----HHHHHHHHHHTEEEEEEEE
T ss_pred hhhhhccccCCCceeEEEEeeeeeecCC-----HHHHHHHHHHHcCCCcEEE
Confidence 22100 0012333445667778899864 24566666 4579974333
No 13
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=93.72 E-value=1 Score=45.49 Aligned_cols=160 Identities=20% Similarity=0.328 Sum_probs=87.2
Q ss_pred hHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEE
Q 037028 230 NASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFE 309 (503)
Q Consensus 230 NqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFe 309 (503)
.+.|++++.-...-+|||+|-+ .| .++.+|+.+. | .+|+|..+.| ..++.+.+++. ....=..+
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG----~G----~~~~~l~~~~---p-~~~~~~~dlp-~v~~~a~~~~~---~~~~~rv~ 231 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGG----AG----ALAKECMSLY---P-GCKITVFDIP-EVVWTAKQHFS---FQEEEQID 231 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCT----TS----HHHHHHHHHC---S-SCEEEEEECH-HHHHHHHHHSC---C--CCSEE
T ss_pred HHHHHHhcCcccCCeEEeeCCC----CC----HHHHHHHHhC---C-CceeEeccCH-HHHHHHHHhhh---hcccCcee
Confidence 4678888765556689999964 34 2555666653 4 6899988864 23443333321 11111245
Q ss_pred EeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCc-EEEEEeecCCC--CCCchHHHH
Q 037028 310 FLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPK-VVMLVEQDSSH--NGPFFLGRF 385 (503)
Q Consensus 310 F~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pk-vvvlvE~ea~~--ns~~F~~RF 385 (503)
|..- ++- ++ .....+++.. ..-||+..++. ...+|+.+ +.|+|. .++++|.-.+. +.|.+
T Consensus 232 ~~~g--D~~--~~---~~~~~D~~~~--~~vlh~~~d~~---~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~---- 295 (353)
T 4a6d_A 232 FQEG--DFF--KD---PLPEADLYIL--ARVLHDWADGK---CSHLLERIYHTCKPGGGILVIESLLDEDRRGPLL---- 295 (353)
T ss_dssp EEES--CTT--TS---CCCCCSEEEE--ESSGGGSCHHH---HHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHH----
T ss_pred eecC--ccc--cC---CCCCceEEEe--eeecccCCHHH---HHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHH----
Confidence 5432 211 11 1122344444 44568876642 34677776 569996 46666654332 22211
Q ss_pred HHHHHHHHHHHhhhhccCCCCCHHHHHHHHHHHHHHHhHhhhcCCCCccccccchhhHHHHHhcCCceeecC
Q 037028 386 MEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPI 457 (503)
Q Consensus 386 ~eAL~yYsAlFDSLda~lp~~~~eR~~iE~~~lg~eI~NiVAcEG~~RvERhE~~~~Wr~rm~~aGF~~~~l 457 (503)
.++|| |.=.+.+.|.+| +.++|++.+++|||+.+.+
T Consensus 296 -------~~~~d------------------------l~ml~~~~g~er-----t~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 296 -------TQLYS------------------------LNMLVQTEGQER-----TPTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp -------HHHHH------------------------HHHHHSSSCCCC-----CHHHHHHHHHHHTCEEEEE
T ss_pred -------HHHHH------------------------HHHHHhCCCcCC-----CHHHHHHHHHHCCCceEEE
Confidence 11111 101223456655 4579999999999998776
No 14
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=93.34 E-value=2.5 Score=41.86 Aligned_cols=117 Identities=16% Similarity=0.187 Sum_probs=66.6
Q ss_pred HHHhhhcCCc-eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--E
Q 037028 232 SILEAFEGES-LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--F 308 (503)
Q Consensus 232 AILEA~~g~~-~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--F 308 (503)
.|++.+.-.+ ..+|+|+|-+ .|. +...|+.+- | .+++|+++. ...++.+.+++. ..++. +
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G----~G~----~~~~l~~~~---p-~~~~~~~D~-~~~~~~a~~~~~----~~~~~~~v 231 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGG----HGT----YLAQVLRRH---P-QLTGQIWDL-PTTRDAARKTIH----AHDLGGRV 231 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCT----TCH----HHHHHHHHC---T-TCEEEEEEC-GGGHHHHHHHHH----HTTCGGGE
T ss_pred HHHHhCCCcCCCCEEEEeCCC----cCH----HHHHHHHhC---C-CCeEEEEEC-HHHHHHHHHHHH----hcCCCCce
Confidence 6777776555 7899999964 332 455555542 3 489999988 456665555443 34442 5
Q ss_pred EEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcE-EEEEeecC
Q 037028 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKV-VMLVEQDS 374 (503)
Q Consensus 309 eF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkv-vvlvE~ea 374 (503)
+|..- ++.+..+ + .++.+=+|-+...||++.++ ....+|+.+ +.|+|.- ++++|.-.
T Consensus 232 ~~~~~--d~~~~~~--~--~~~~~D~v~~~~vlh~~~~~---~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (352)
T 3mcz_A 232 EFFEK--NLLDARN--F--EGGAADVVMLNDCLHYFDAR---EAREVIGHAAGLVKPGGALLILTMTM 290 (352)
T ss_dssp EEEEC--CTTCGGG--G--TTCCEEEEEEESCGGGSCHH---HHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred EEEeC--CcccCcc--c--CCCCccEEEEecccccCCHH---HHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 55432 2222210 0 12223344455667887653 235677766 5689964 44556443
No 15
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=93.02 E-value=0.53 Score=43.07 Aligned_cols=106 Identities=21% Similarity=0.263 Sum_probs=58.1
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC------cEEEeeecc
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL------NFEFLAVEK 315 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi------pFeF~~v~~ 315 (503)
.-.|+|+|.+. | .+...|+.+ + .++|||+.+...++.+.++ ++..++ .++|.. .
T Consensus 31 ~~~vLdiG~G~----G----~~~~~l~~~-~-----~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~--~ 90 (235)
T 3sm3_A 31 DDEILDIGCGS----G----KISLELASK-G-----YSVTGIDINSEAIRLAETA----ARSPGLNQKTGGKAEFKV--E 90 (235)
T ss_dssp TCEEEEETCTT----S----HHHHHHHHT-T-----CEEEEEESCHHHHHHHHHH----TTCCSCCSSSSCEEEEEE--C
T ss_pred CCeEEEECCCC----C----HHHHHHHhC-C-----CeEEEEECCHHHHHHHHHH----HHhcCCccccCcceEEEE--e
Confidence 34799999653 3 244455655 1 4899999886666555443 345555 344433 2
Q ss_pred cccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcE-EEEEeecC
Q 037028 316 SLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKV-VMLVEQDS 374 (503)
Q Consensus 316 ~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkv-vvlvE~ea 374 (503)
+++.+. ..++..=+|-+...|||+.+. .....+|+.+ +.|+|.- +++++...
T Consensus 91 d~~~~~-----~~~~~~D~v~~~~~l~~~~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 91 NASSLS-----FHDSSFDFAVMQAFLTSVPDP--KERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp CTTSCC-----SCTTCEEEEEEESCGGGCCCH--HHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred cccccC-----CCCCceeEEEEcchhhcCCCH--HHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 333322 223333344455667887642 1233566665 5689974 44445443
No 16
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=92.94 E-value=4.2 Score=37.83 Aligned_cols=113 Identities=14% Similarity=0.187 Sum_probs=63.6
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc-EE
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN-FE 309 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip-Fe 309 (503)
.-+++.+.-...-+|+|+|.+. |. +...|+.+. + ++|||+.+...++.+.+++.+ .|++ ++
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~----G~----~~~~l~~~~--~----~v~~vD~s~~~~~~a~~~~~~----~~~~~v~ 72 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGA----GH----TALAFSPYV--Q----ECIGVDATKEMVEVASSFAQE----KGVENVR 72 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTT----SH----HHHHHGGGS--S----EEEEEESCHHHHHHHHHHHHH----HTCCSEE
T ss_pred chHHHHhCcCCCCEEEEEccCc----CH----HHHHHHHhC--C----EEEEEECCHHHHHHHHHHHHH----cCCCCeE
Confidence 3445555556667899999753 32 444566542 1 899999887777666655533 3433 44
Q ss_pred EeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEE-Eeec
Q 037028 310 FLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVML-VEQD 373 (503)
Q Consensus 310 F~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvl-vE~e 373 (503)
|.. .+++++. ..++..=+|-|...+||+.+ ...+|+.+ +-|+|.-.++ ++..
T Consensus 73 ~~~--~d~~~~~-----~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 73 FQQ--GTAESLP-----FPDDSFDIITCRYAAHHFSD-----VRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp EEE--CBTTBCC-----SCTTCEEEEEEESCGGGCSC-----HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEe--cccccCC-----CCCCcEEEEEECCchhhccC-----HHHHHHHHHHHcCCCcEEEEEEcC
Confidence 432 2344332 23343334445566788753 23455554 6789975444 4543
No 17
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=92.46 E-value=1.8 Score=40.32 Aligned_cols=128 Identities=12% Similarity=0.125 Sum_probs=71.1
Q ss_pred HHHhccchhhhhHhhhHHHHhhhcC-CceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHH
Q 037028 215 VYEICPQIQFGHFVANASILEAFEG-ESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEI 293 (503)
Q Consensus 215 ~~e~~P~~kfahftANqAILEA~~g-~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~t 293 (503)
+|+..+-..-.+......+++.+.+ ...-+|+|+|.|. | .+...|+.+. | . ++|||+.+...++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~----G----~~~~~l~~~~---~-~-~v~~vD~s~~~~~~a 85 (257)
T 3f4k_A 19 YFKLLKRQGPGSPEATRKAVSFINELTDDAKIADIGCGT----G----GQTLFLADYV---K-G-QITGIDLFPDFIEIF 85 (257)
T ss_dssp HHTTSSCSSSCCHHHHHHHHTTSCCCCTTCEEEEETCTT----S----HHHHHHHHHC---C-S-EEEEEESCHHHHHHH
T ss_pred HHcCccccCCCCHHHHHHHHHHHhcCCCCCeEEEeCCCC----C----HHHHHHHHhC---C-C-eEEEEECCHHHHHHH
Confidence 4444444444444555556666643 3345899999653 3 2344455543 2 2 999999887777666
Q ss_pred HHHHHHHHhhCCCc--EEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE-E
Q 037028 294 GDELKRYADGLKLN--FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVM-L 369 (503)
Q Consensus 294 g~rL~~fA~~lgip--FeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvv-l 369 (503)
.+++ +..|++ .+|.. .+++++. ..++..=+|-|...+||+ + ...+|+.+ +-|+|.-.+ +
T Consensus 86 ~~~~----~~~~~~~~~~~~~--~d~~~~~-----~~~~~fD~v~~~~~l~~~-~-----~~~~l~~~~~~L~pgG~l~~ 148 (257)
T 3f4k_A 86 NENA----VKANCADRVKGIT--GSMDNLP-----FQNEELDLIWSEGAIYNI-G-----FERGMNEWSKYLKKGGFIAV 148 (257)
T ss_dssp HHHH----HHTTCTTTEEEEE--CCTTSCS-----SCTTCEEEEEEESCSCCC-C-----HHHHHHHHHTTEEEEEEEEE
T ss_pred HHHH----HHcCCCCceEEEE--CChhhCC-----CCCCCEEEEEecChHhhc-C-----HHHHHHHHHHHcCCCcEEEE
Confidence 5554 455665 55543 2333332 223333344445567887 2 24566665 558997444 4
Q ss_pred Eee
Q 037028 370 VEQ 372 (503)
Q Consensus 370 vE~ 372 (503)
++.
T Consensus 149 ~~~ 151 (257)
T 3f4k_A 149 SEA 151 (257)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 18
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=92.46 E-value=2 Score=43.26 Aligned_cols=117 Identities=19% Similarity=0.265 Sum_probs=66.8
Q ss_pred hHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC--c
Q 037028 230 NASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL--N 307 (503)
Q Consensus 230 NqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi--p 307 (503)
...|++.+.-.+..+|+|+|-+ .|. +...|+.+. | .+++|+++. ...++.+.+++.+ .|+ .
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G----~G~----~~~~l~~~~---p-~~~~~~~D~-~~~~~~a~~~~~~----~~l~~~ 253 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGG----RGS----LMAAVLDAF---P-GLRGTLLER-PPVAEEARELLTG----RGLADR 253 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCT----TSH----HHHHHHHHC---T-TCEEEEEEC-HHHHHHHHHHHHH----TTCTTT
T ss_pred HHHHHHhCCCccCcEEEEeCCC----ccH----HHHHHHHHC---C-CCeEEEEcC-HHHHHHHHHhhhh----cCcCCc
Confidence 3567777766677899999964 443 445565542 3 589999998 5566666655543 343 3
Q ss_pred EEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHHH-hcCCc-EEEEEeecCC
Q 037028 308 FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLH-QLSPK-VVMLVEQDSS 375 (503)
Q Consensus 308 FeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir-~L~Pk-vvvlvE~ea~ 375 (503)
.+|..- ++.+ + +.. .-++++. ..-||+..++ ....+|+.++ .|+|. .++++|.-..
T Consensus 254 v~~~~~--d~~~--~--~p~-~~D~v~~--~~vlh~~~d~---~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 254 CEILPG--DFFE--T--IPD-GADVYLI--KHVLHDWDDD---DVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp EEEEEC--CTTT--C--CCS-SCSEEEE--ESCGGGSCHH---HHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred eEEecc--CCCC--C--CCC-CceEEEh--hhhhccCCHH---HHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 566543 2211 1 111 2234433 3445877653 2235777774 68996 4555565443
No 19
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=92.17 E-value=1.7 Score=41.14 Aligned_cols=105 Identities=20% Similarity=0.295 Sum_probs=60.1
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc-EEEeeecccccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN-FEFLAVEKSLET 319 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip-FeF~~v~~~le~ 319 (503)
..-+|+|+|.+. | .+...|+.+. | ..++|||+.+...++.+.+++ +..|++ .+|.. .++++
T Consensus 37 ~~~~vLDiG~G~----G----~~~~~l~~~~---~-~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~~~--~d~~~ 98 (276)
T 3mgg_A 37 PGAKVLEAGCGI----G----AQTVILAKNN---P-DAEITSIDISPESLEKARENT----EKNGIKNVKFLQ--ANIFS 98 (276)
T ss_dssp TTCEEEETTCTT----S----HHHHHHHHHC---T-TSEEEEEESCHHHHHHHHHHH----HHTTCCSEEEEE--CCGGG
T ss_pred CCCeEEEecCCC----C----HHHHHHHHhC---C-CCEEEEEECCHHHHHHHHHHH----HHcCCCCcEEEE--ccccc
Confidence 456899999753 3 3344555542 3 379999998877776665554 344543 44432 23333
Q ss_pred cCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEE-EEEeec
Q 037028 320 LQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVV-MLVEQD 373 (503)
Q Consensus 320 l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvv-vlvE~e 373 (503)
+. ..++..=+|-+...|||+.+. ..+|+.+ +-|+|.-+ ++++.+
T Consensus 99 ~~-----~~~~~fD~v~~~~~l~~~~~~-----~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 99 LP-----FEDSSFDHIFVCFVLEHLQSP-----EEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp CC-----SCTTCEEEEEEESCGGGCSCH-----HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CC-----CCCCCeeEEEEechhhhcCCH-----HHHHHHHHHHcCCCcEEEEEEcC
Confidence 32 223444445556667887542 3566655 56899744 444544
No 20
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=91.98 E-value=1.5 Score=40.16 Aligned_cols=115 Identities=22% Similarity=0.312 Sum_probs=64.6
Q ss_pred HHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC------
Q 037028 233 ILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL------ 306 (503)
Q Consensus 233 ILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi------ 306 (503)
|++.+.....-.|+|+|.+.| .+...|+.+. | ..++|||+.+...++.+.+++ +..|+
T Consensus 21 l~~~l~~~~~~~vLDiGcG~G--------~~~~~l~~~~---~-~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~~~~ 84 (217)
T 3jwh_A 21 VVAALKQSNARRVIDLGCGQG--------NLLKILLKDS---F-FEQITGVDVSYRSLEIAQERL----DRLRLPRNQWE 84 (217)
T ss_dssp HHHHHHHTTCCEEEEETCTTC--------HHHHHHHHCT---T-CSEEEEEESCHHHHHHHHHHH----TTCCCCHHHHT
T ss_pred HHHHHHhcCCCEEEEeCCCCC--------HHHHHHHhhC---C-CCEEEEEECCHHHHHHHHHHH----HHhcCCcccCc
Confidence 333333334458999997533 2445566642 2 369999999877777666654 33444
Q ss_pred cEEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEeec
Q 037028 307 NFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVEQD 373 (503)
Q Consensus 307 pFeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE~e 373 (503)
.++|.. .+++.+... ...=++|+ |...|||+.+. ....+|+.+ +.|+|..++++...
T Consensus 85 ~v~~~~--~d~~~~~~~---~~~fD~v~--~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 85 RLQLIQ--GALTYQDKR---FHGYDAAT--VIEVIEHLDLS---RLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp TEEEEE--CCTTSCCGG---GCSCSEEE--EESCGGGCCHH---HHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred ceEEEe--CCccccccc---CCCcCEEe--eHHHHHcCCHH---HHHHHHHHHHHHcCCCEEEEEccC
Confidence 355543 233222211 11223444 44556888532 345677766 45899987776554
No 21
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=91.94 E-value=2.2 Score=42.62 Aligned_cols=113 Identities=16% Similarity=0.195 Sum_probs=65.5
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--E
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--F 308 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--F 308 (503)
..|++.+.-.+..+|+|+|.+ .| .+...|+.+. | .+++|+++. ...++.+.+++. ..|++ +
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G----~G----~~~~~l~~~~---~-~~~~~~~D~-~~~~~~a~~~~~----~~~~~~~v 234 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGG----NG----GMLAAIALRA---P-HLRGTLVEL-AGPAERARRRFA----DAGLADRV 234 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCT----TS----HHHHHHHHHC---T-TCEEEEEEC-HHHHHHHHHHHH----HTTCTTTE
T ss_pred HHHHHhCCCCCCCEEEEECCC----cC----HHHHHHHHHC---C-CCEEEEEeC-HHHHHHHHHHHH----hcCCCCce
Confidence 567777765567799999964 44 3445555542 3 589999998 666666666553 34543 5
Q ss_pred EEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcE-EEEEee
Q 037028 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKV-VMLVEQ 372 (503)
Q Consensus 309 eF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkv-vvlvE~ 372 (503)
+|... ++.+ .+ +...=+|-+...||++.++ ....+|+.+ +.|+|.- ++++|.
T Consensus 235 ~~~~~--d~~~----~~---~~~~D~v~~~~vl~~~~~~---~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 235 TVAEG--DFFK----PL---PVTADVVLLSFVLLNWSDE---DALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEC--CTTS----CC---SCCEEEEEEESCGGGSCHH---HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEeC--CCCC----cC---CCCCCEEEEeccccCCCHH---HHHHHHHHHHHhcCCCcEEEEEec
Confidence 66432 2211 01 1113334455567887653 123566665 5689975 555666
No 22
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=91.82 E-value=2.6 Score=41.47 Aligned_cols=114 Identities=19% Similarity=0.187 Sum_probs=63.3
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC--cEE
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL--NFE 309 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi--pFe 309 (503)
.|++.+.-.+..+|+|+|-+ .| .+...|+.+- | .+++|+++. ...++.+.+++. ..|+ ..+
T Consensus 160 ~~~~~~~~~~~~~vlDvG~G----~G----~~~~~l~~~~---p-~~~~~~~D~-~~~~~~a~~~~~----~~~~~~~v~ 222 (332)
T 3i53_A 160 GIAAKYDWAALGHVVDVGGG----SG----GLLSALLTAH---E-DLSGTVLDL-QGPASAAHRRFL----DTGLSGRAQ 222 (332)
T ss_dssp TGGGSSCCGGGSEEEEETCT----TS----HHHHHHHHHC---T-TCEEEEEEC-HHHHHHHHHHHH----HTTCTTTEE
T ss_pred HHHHhCCCCCCCEEEEeCCC----hh----HHHHHHHHHC---C-CCeEEEecC-HHHHHHHHHhhh----hcCcCcCeE
Confidence 34455544456799999964 44 3444555542 3 589999987 566666665554 3343 366
Q ss_pred EeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCc-EEEEEeecC
Q 037028 310 FLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPK-VVMLVEQDS 374 (503)
Q Consensus 310 F~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pk-vvvlvE~ea 374 (503)
|..- ++. ++ +.. .-++++ |...||+..++ ....+|+.+ +.|+|. .++++|.-.
T Consensus 223 ~~~~--d~~--~~--~p~-~~D~v~--~~~vlh~~~~~---~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 223 VVVG--SFF--DP--LPA-GAGGYV--LSAVLHDWDDL---SAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp EEEC--CTT--SC--CCC-SCSEEE--EESCGGGSCHH---HHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred EecC--CCC--CC--CCC-CCcEEE--EehhhccCCHH---HHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 6543 221 11 111 223333 44556887653 234677766 568996 445555443
No 23
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=91.41 E-value=3.1 Score=41.29 Aligned_cols=114 Identities=17% Similarity=0.220 Sum_probs=64.5
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC--cE
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL--NF 308 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi--pF 308 (503)
+.|++.+.-.+..+|+|+|.+ .| .+...|+.+. | .+++|+++. ...++.+.+++. ..|+ .+
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G----~G----~~~~~l~~~~---~-~~~~~~~D~-~~~~~~a~~~~~----~~~~~~~v 235 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGG----KG----GFAAAIARRA---P-HVSATVLEM-AGTVDTARSYLK----DEGLSDRV 235 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCT----TS----HHHHHHHHHC---T-TCEEEEEEC-TTHHHHHHHHHH----HTTCTTTE
T ss_pred HHHHHhCCCccCcEEEEeCCc----Cc----HHHHHHHHhC---C-CCEEEEecC-HHHHHHHHHHHH----hcCCCCce
Confidence 567777765566799999965 33 2334455442 3 589999997 556666655543 3454 36
Q ss_pred EEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcE-EEEEeec
Q 037028 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKV-VMLVEQD 373 (503)
Q Consensus 309 eF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkv-vvlvE~e 373 (503)
+|..- ++.+- + ++..=+|-+...||++.++ ....+|+.+ +.|+|.- ++++|..
T Consensus 236 ~~~~~--d~~~~----~---~~~~D~v~~~~vl~~~~~~---~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 236 DVVEG--DFFEP----L---PRKADAIILSFVLLNWPDH---DAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEC--CTTSC----C---SSCEEEEEEESCGGGSCHH---HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEeC--CCCCC----C---CCCccEEEEcccccCCCHH---HHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 66432 22110 1 1113334445567887543 123566666 5679975 5555654
No 24
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=91.32 E-value=1.5 Score=40.75 Aligned_cols=113 Identities=14% Similarity=0.207 Sum_probs=62.8
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEE
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEF 310 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF 310 (503)
..+++.+.....-+|+|+|.+. |. +...|+.+. ..++|+|+.+...++.+.+++.+. -..+|
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~----G~----~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~ 144 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGI----GR----ITKNLLTKL-----YATTDLLEPVKHMLEEAKRELAGM-----PVGKF 144 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTT----TH----HHHHTHHHH-----CSEEEEEESCHHHHHHHHHHTTTS-----SEEEE
T ss_pred HHHHHhhcccCCCEEEEECCCc----CH----HHHHHHHhh-----cCEEEEEeCCHHHHHHHHHHhccC-----CceEE
Confidence 5666666655677999999753 32 333444432 248999998876666665554321 23444
Q ss_pred eeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 311 LAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 311 ~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
.. .+++++. ..++..=+|-|...|||+.++ ....+|+.+ +.|+|.-++++.
T Consensus 145 ~~--~d~~~~~-----~~~~~fD~v~~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~i~ 196 (254)
T 1xtp_A 145 IL--ASMETAT-----LPPNTYDLIVIQWTAIYLTDA---DFVKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp EE--SCGGGCC-----CCSSCEEEEEEESCGGGSCHH---HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EE--ccHHHCC-----CCCCCeEEEEEcchhhhCCHH---HHHHHHHHHHHhcCCCeEEEEE
Confidence 32 2343332 223333333455567888642 234555555 678997554443
No 25
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=91.28 E-value=1.5 Score=43.71 Aligned_cols=132 Identities=13% Similarity=0.151 Sum_probs=76.6
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEe
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFL 311 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~ 311 (503)
.|++.+.. --.|+|+|.|+| .|--.++.. +| ..++++++-+...++-+.++ +..+|+++.|.
T Consensus 125 ~i~~~i~~--p~~VLDLGCG~G--------pLAl~~~~~---~p-~a~y~a~DId~~~le~a~~~----l~~~g~~~~~~ 186 (281)
T 3lcv_B 125 ELFRHLPR--PNTLRDLACGLN--------PLAAPWMGL---PA-ETVYIASDIDARLVGFVDEA----LTRLNVPHRTN 186 (281)
T ss_dssp HHGGGSCC--CSEEEETTCTTG--------GGCCTTTTC---CT-TCEEEEEESBHHHHHHHHHH----HHHTTCCEEEE
T ss_pred HHHhccCC--CceeeeeccCcc--------HHHHHHHhh---CC-CCEEEEEeCCHHHHHHHHHH----HHhcCCCceEE
Confidence 45555533 337899996544 444344332 24 59999999887777666555 46779998886
Q ss_pred eecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEeec--CCCCCCchHHHHHHHH
Q 037028 312 AVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLVEQD--SSHNGPFFLGRFMEAL 389 (503)
Q Consensus 312 ~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~PkvvvlvE~e--a~~ns~~F~~RF~eAL 389 (503)
...-..+ . -..+.+++.+|- .+|||-++..+ ..++.+..|+|..|++.=+- .+--++.+.
T Consensus 187 v~D~~~~-----~-p~~~~DvaL~lk--ti~~Le~q~kg---~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~------- 248 (281)
T 3lcv_B 187 VADLLED-----R-LDEPADVTLLLK--TLPCLETQQRG---SGWEVIDIVNSPNIVVTFPTKSLGQRSKGMF------- 248 (281)
T ss_dssp ECCTTTS-----C-CCSCCSEEEETT--CHHHHHHHSTT---HHHHHHHHSSCSEEEEEEECC-------CHH-------
T ss_pred Eeeeccc-----C-CCCCcchHHHHH--HHHHhhhhhhH---HHHHHHHHhCCCCEEEeccchhhcCCCcchh-------
Confidence 5421111 1 113345555544 45888765443 45599999999888776433 222233332
Q ss_pred HHHHHHHhhh
Q 037028 390 HYYSAIFDSL 399 (503)
Q Consensus 390 ~yYsAlFDSL 399 (503)
..|+..|+..
T Consensus 249 ~~Y~~~~e~~ 258 (281)
T 3lcv_B 249 QNYSQSFESQ 258 (281)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 4577777764
No 26
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=91.07 E-value=1.9 Score=38.72 Aligned_cols=112 Identities=13% Similarity=0.169 Sum_probs=65.7
Q ss_pred hHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--
Q 037028 230 NASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN-- 307 (503)
Q Consensus 230 NqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip-- 307 (503)
.+.|++.+..... +|+|+|.+. | .+...|+.+ | ..++|||+.+...++.+.+++. ..|+.
T Consensus 33 ~~~~~~~~~~~~~-~vLdiG~G~----G----~~~~~l~~~----~-~~~v~~~D~s~~~~~~a~~~~~----~~~~~~~ 94 (219)
T 3dlc_A 33 AENIINRFGITAG-TCIDIGSGP----G----ALSIALAKQ----S-DFSIRALDFSKHMNEIALKNIA----DANLNDR 94 (219)
T ss_dssp HHHHHHHHCCCEE-EEEEETCTT----S----HHHHHHHHH----S-EEEEEEEESCHHHHHHHHHHHH----HTTCTTT
T ss_pred HHHHHHhcCCCCC-EEEEECCCC----C----HHHHHHHHc----C-CCeEEEEECCHHHHHHHHHHHH----hccccCc
Confidence 3566666665556 999999753 3 245556665 2 4899999988777777666654 34442
Q ss_pred EEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 308 FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 308 FeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
++|.. .+++++. ..++..=+|-|...|||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 95 ~~~~~--~d~~~~~-----~~~~~~D~v~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 95 IQIVQ--GDVHNIP-----IEDNYADLIVSRGSVFFWED-----VATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp EEEEE--CBTTBCS-----SCTTCEEEEEEESCGGGCSC-----HHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEE--cCHHHCC-----CCcccccEEEECchHhhccC-----HHHHHHHHHHhCCCCCEEEEE
Confidence 45533 2333332 22333334445556788732 23455555 568997655553
No 27
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=91.02 E-value=1.5 Score=42.53 Aligned_cols=113 Identities=14% Similarity=0.181 Sum_probs=66.6
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--E
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--F 308 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--F 308 (503)
..|++.+.-...-+|+|+|.| |-.+...|+.+.+ .++|||+.+...++.+.+++ +..|++ .
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG--------~G~~~~~la~~~~-----~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v 124 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCG--------WGSTMRHAVAEYD-----VNVIGLTLSENQYAHDKAMF----DEVDSPRRK 124 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCT--------TSHHHHHHHHHHC-----CEEEEEECCHHHHHHHHHHH----HHSCCSSCE
T ss_pred HHHHHHcCCCCcCEEEEeecc--------CcHHHHHHHHhCC-----CEEEEEECCHHHHHHHHHHH----HhcCCCCce
Confidence 345666655566789999954 3345556666532 57999999877777666654 445655 4
Q ss_pred EEeeecccccccCcccccccCCcEEEEEecccccccccc----ccchHHHHHHHH-HhcCCcEEEEE
Q 037028 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKE----SRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 309 eF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~e----s~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
+|. ..+++++ . ..=++|+.+ ..+||+.+. .......+|+.+ +-|+|.-.+++
T Consensus 125 ~~~--~~d~~~~-~-----~~fD~v~~~--~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 125 EVR--IQGWEEF-D-----EPVDRIVSL--GAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp EEE--ECCGGGC-C-----CCCSEEEEE--SCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred EEE--ECCHHHc-C-----CCccEEEEc--chHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 443 2344433 1 122444444 556888653 223445667666 56899744444
No 28
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=90.69 E-value=1.6 Score=39.28 Aligned_cols=97 Identities=15% Similarity=0.134 Sum_probs=54.7
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccC
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQ 321 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~ 321 (503)
.-.|+|+|.+. |. +...|+.+ + .++|||+.+...++.+.++ .-..+|. ..+++++.
T Consensus 42 ~~~vLDiGcG~----G~----~~~~l~~~-~-----~~v~gvD~s~~~~~~a~~~--------~~~~~~~--~~d~~~~~ 97 (203)
T 3h2b_A 42 DGVILDVGSGT----GR----WTGHLASL-G-----HQIEGLEPATRLVELARQT--------HPSVTFH--HGTITDLS 97 (203)
T ss_dssp CSCEEEETCTT----CH----HHHHHHHT-T-----CCEEEECCCHHHHHHHHHH--------CTTSEEE--CCCGGGGG
T ss_pred CCeEEEecCCC----CH----HHHHHHhc-C-----CeEEEEeCCHHHHHHHHHh--------CCCCeEE--eCcccccc
Confidence 56799999753 32 45566665 2 3899999887666555544 1123332 22333332
Q ss_pred cccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 322 AKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 322 ~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
..++..=+|-|...|||+..+ ....+|+.+ +.|+|.-.+++
T Consensus 98 -----~~~~~fD~v~~~~~l~~~~~~---~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 98 -----DSPKRWAGLLAWYSLIHMGPG---ELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp -----GSCCCEEEEEEESSSTTCCTT---THHHHHHHHHHTEEEEEEEEE
T ss_pred -----cCCCCeEEEEehhhHhcCCHH---HHHHHHHHHHHHcCCCcEEEE
Confidence 223433344455677888632 234566655 56899754444
No 29
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=90.38 E-value=1.2 Score=40.63 Aligned_cols=119 Identities=19% Similarity=0.247 Sum_probs=66.4
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC-----
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL----- 306 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi----- 306 (503)
.|++.+...+.-.|+|+|.+.| .+...|+.+. | ..++|||+.+...++.+.+++. ..++
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G--------~~~~~l~~~~---~-~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~ 83 (219)
T 3jwg_A 20 TVVAVLKSVNAKKVIDLGCGEG--------NLLSLLLKDK---S-FEQITGVDVSYSVLERAKDRLK----IDRLPEMQR 83 (219)
T ss_dssp HHHHHHHHTTCCEEEEETCTTC--------HHHHHHHTST---T-CCEEEEEESCHHHHHHHHHHHT----GGGSCHHHH
T ss_pred HHHHHHhhcCCCEEEEecCCCC--------HHHHHHHhcC---C-CCEEEEEECCHHHHHHHHHHHH----hhccccccC
Confidence 3444444344558999997533 2455566542 2 3799999998777777666653 2222
Q ss_pred -cEEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEeecCCC
Q 037028 307 -NFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVEQDSSH 376 (503)
Q Consensus 307 -pFeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE~ea~~ 376 (503)
.++|.. .+++.+... ...=++|+ |...|||+.++ .+..+|+.+ +.|+|..++++..+..+
T Consensus 84 ~~v~~~~--~d~~~~~~~---~~~fD~V~--~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~~i~~~~~~~ 145 (219)
T 3jwg_A 84 KRISLFQ--SSLVYRDKR---FSGYDAAT--VIEVIEHLDEN---RLQAFEKVLFEFTRPQTVIVSTPNKEY 145 (219)
T ss_dssp TTEEEEE--CCSSSCCGG---GTTCSEEE--EESCGGGCCHH---HHHHHHHHHHTTTCCSEEEEEEEBGGG
T ss_pred cceEEEe--Ccccccccc---cCCCCEEE--EHHHHHhCCHH---HHHHHHHHHHHhhCCCEEEEEccchhh
Confidence 344433 233222211 11123333 55567888542 234666666 56899987777665433
No 30
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=90.19 E-value=2.3 Score=41.53 Aligned_cols=109 Identities=14% Similarity=0.105 Sum_probs=62.2
Q ss_pred HHHHhhhc-CCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--
Q 037028 231 ASILEAFE-GESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN-- 307 (503)
Q Consensus 231 qAILEA~~-g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip-- 307 (503)
+.|++.+. -...-+|+|+|.+. | .+...|+.+.+ .++|||+.+...++.+.+++ +..|++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~----G----~~~~~la~~~~-----~~v~gvD~s~~~~~~a~~~~----~~~~~~~~ 168 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGR----G----GSMVMAHRRFG-----SRVEGVTLSAAQADFGNRRA----RELRIDDH 168 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTT----S----HHHHHHHHHHC-----CEEEEEESCHHHHHHHHHHH----HHTTCTTT
T ss_pred HHHHHHhccCCCCCEEEEecCCC----C----HHHHHHHHHcC-----CEEEEEeCCHHHHHHHHHHH----HHcCCCCc
Confidence 35666665 34456899999643 2 34445665532 58999998877776665554 445654
Q ss_pred EEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEE
Q 037028 308 FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVML 369 (503)
Q Consensus 308 FeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvl 369 (503)
.+|.. .+++++. ..++..=+|-+...|||+ + ...+|+.+ +-|+|.-.++
T Consensus 169 v~~~~--~d~~~~~-----~~~~~fD~V~~~~~l~~~-~-----~~~~l~~~~~~LkpgG~l~ 218 (312)
T 3vc1_A 169 VRSRV--CNMLDTP-----FDKGAVTASWNNESTMYV-D-----LHDLFSEHSRFLKVGGRYV 218 (312)
T ss_dssp EEEEE--CCTTSCC-----CCTTCEEEEEEESCGGGS-C-----HHHHHHHHHHHEEEEEEEE
T ss_pred eEEEE--CChhcCC-----CCCCCEeEEEECCchhhC-C-----HHHHHHHHHHHcCCCcEEE
Confidence 56643 2333332 223333333345566877 3 34555555 6789974443
No 31
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=89.16 E-value=3.8 Score=40.81 Aligned_cols=112 Identities=13% Similarity=0.194 Sum_probs=59.9
Q ss_pred hHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC--c
Q 037028 230 NASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL--N 307 (503)
Q Consensus 230 NqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi--p 307 (503)
...|++.+.-.+.-+|+|+|-+ .| .+...|+.+- | .+++|+++.+. .+. .+.++..++ .
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G----~G----~~~~~l~~~~---p-~~~~~~~D~~~-~~~------~~~~~~~~~~~~ 233 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGG----RG----GFLLTVLREH---P-GLQGVLLDRAE-VVA------RHRLDAPDVAGR 233 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCT----TS----HHHHHHHHHC---T-TEEEEEEECHH-HHT------TCCCCCGGGTTS
T ss_pred HHHHHHhCCccCCceEEEECCc----cC----HHHHHHHHHC---C-CCEEEEecCHH-Hhh------cccccccCCCCC
Confidence 3467787766677899999964 33 2444555542 3 58999998742 111 111222232 2
Q ss_pred EEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCc-EEEEEeec
Q 037028 308 FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPK-VVMLVEQD 373 (503)
Q Consensus 308 FeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pk-vvvlvE~e 373 (503)
.+|..- ++. + .+. .-++++. ...||++.++ ....+|+.+ +.|+|. .++++|.-
T Consensus 234 v~~~~~--d~~--~--~~p--~~D~v~~--~~vlh~~~d~---~~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 234 WKVVEG--DFL--R--EVP--HADVHVL--KRILHNWGDE---DSVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp EEEEEC--CTT--T--CCC--CCSEEEE--ESCGGGSCHH---HHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred eEEEec--CCC--C--CCC--CCcEEEE--ehhccCCCHH---HHHHHHHHHHHhcCCCCEEEEEEec
Confidence 555432 221 1 111 2234443 4456887653 224677766 568996 44555643
No 32
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=88.99 E-value=4.3 Score=36.65 Aligned_cols=96 Identities=16% Similarity=0.199 Sum_probs=55.8
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccC
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQ 321 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~ 321 (503)
.-.|+|+|.+.| .+...|+.+ + .++|||+.+...++.+.+++ ++.+.- .+++++.
T Consensus 44 ~~~vLDiGcG~G--------~~~~~l~~~-~-----~~v~~vD~s~~~~~~a~~~~-------~~~~~~----~d~~~~~ 98 (211)
T 3e23_A 44 GAKILELGCGAG--------YQAEAMLAA-G-----FDVDATDGSPELAAEASRRL-------GRPVRT----MLFHQLD 98 (211)
T ss_dssp TCEEEESSCTTS--------HHHHHHHHT-T-----CEEEEEESCHHHHHHHHHHH-------TSCCEE----CCGGGCC
T ss_pred CCcEEEECCCCC--------HHHHHHHHc-C-----CeEEEECCCHHHHHHHHHhc-------CCceEE----eeeccCC
Confidence 447999996533 245556655 2 48999998877776666654 443321 2333332
Q ss_pred cccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 322 AKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 322 ~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
.++..=+|-|...|||+..+ ....+|+.+ +.|+|.-++++.
T Consensus 99 ------~~~~fD~v~~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 99 ------AIDAYDAVWAHACLLHVPRD---ELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp ------CCSCEEEEEECSCGGGSCHH---HHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------CCCcEEEEEecCchhhcCHH---HHHHHHHHHHHhcCCCcEEEEE
Confidence 22333344456677887632 234566665 568997555553
No 33
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=88.98 E-value=11 Score=34.65 Aligned_cols=101 Identities=11% Similarity=0.112 Sum_probs=55.9
Q ss_pred eEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccCc
Q 037028 243 VHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQA 322 (503)
Q Consensus 243 VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~~ 322 (503)
-.|+|+|.|.| .+...|+. + ..++|||+.+...++.+.+++.+.- ..-.++|.. .++.++.+
T Consensus 68 ~~vLDiGcG~G--------~~~~~l~~-----~-~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~--~d~~~~~~ 129 (235)
T 3lcc_A 68 GRALVPGCGGG--------HDVVAMAS-----P-ERFVVGLDISESALAKANETYGSSP--KAEYFSFVK--EDVFTWRP 129 (235)
T ss_dssp EEEEEETCTTC--------HHHHHHCB-----T-TEEEEEECSCHHHHHHHHHHHTTSG--GGGGEEEEC--CCTTTCCC
T ss_pred CCEEEeCCCCC--------HHHHHHHh-----C-CCeEEEEECCHHHHHHHHHHhhccC--CCcceEEEE--CchhcCCC
Confidence 49999996533 23335554 2 4789999988777776666553211 112345533 33433332
Q ss_pred ccccccCCcEEEEEeccccccccccccchHHHHHHHHH-hcCCcEEEEE
Q 037028 323 KDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLH-QLSPKVVMLV 370 (503)
Q Consensus 323 ~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir-~L~Pkvvvlv 370 (503)
. +..=+|-+...||++..+ ....+|+.++ .|+|.-.+++
T Consensus 130 ~------~~fD~v~~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 130 T------ELFDLIFDYVFFCAIEPE---MRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp S------SCEEEEEEESSTTTSCGG---GHHHHHHHHHHHEEEEEEEEE
T ss_pred C------CCeeEEEEChhhhcCCHH---HHHHHHHHHHHHCCCCcEEEE
Confidence 2 122233344566887532 3456776665 5899755554
No 34
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=88.69 E-value=2.5 Score=42.73 Aligned_cols=109 Identities=19% Similarity=0.255 Sum_probs=59.1
Q ss_pred HHHHhhhc-CCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEE
Q 037028 231 ASILEAFE-GESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFE 309 (503)
Q Consensus 231 qAILEA~~-g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFe 309 (503)
+.|++.+. -...-+|+|+|-+ .| .+...|+.+- | .+++|+++.+ ..+ +.|+.. -..+
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G----~G----~~~~~l~~~~---p-~~~~~~~D~~-~~~--------~~a~~~-~~v~ 249 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGG----TG----AVASMIVAKY---P-SINAINFDLP-HVI--------QDAPAF-SGVE 249 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCT----TS----HHHHHHHHHC---T-TCEEEEEECH-HHH--------TTCCCC-TTEE
T ss_pred HHHHHhcccccCCCEEEEeCCC----cC----HHHHHHHHhC---C-CCEEEEEehH-HHH--------Hhhhhc-CCCE
Confidence 45677765 3456799999964 33 2444555543 3 5899999862 222 222322 1345
Q ss_pred EeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCc-EEEEEeecC
Q 037028 310 FLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPK-VVMLVEQDS 374 (503)
Q Consensus 310 F~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pk-vvvlvE~ea 374 (503)
|..- ++.+ + + .++++++.+ ..||++.++ ....+|+.+ +.|+|. .++++|.-.
T Consensus 250 ~~~~--d~~~--~--~--p~~D~v~~~--~vlh~~~~~---~~~~~l~~~~~~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 250 HLGG--DMFD--G--V--PKGDAIFIK--WICHDWSDE---HCLKLLKNCYAALPDHGKVIVAEYIL 303 (368)
T ss_dssp EEEC--CTTT--C--C--CCCSEEEEE--SCGGGBCHH---HHHHHHHHHHHHSCTTCEEEEEECCC
T ss_pred EEec--CCCC--C--C--CCCCEEEEe--chhhcCCHH---HHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 5432 2221 1 1 123555444 456887653 234677766 568996 455666543
No 35
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=87.98 E-value=4.9 Score=38.33 Aligned_cols=111 Identities=15% Similarity=0.170 Sum_probs=65.2
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEE
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEF 310 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF 310 (503)
+.+++.+...+.-+|+|+|.|. |. +...|+.+ | .++|||+.+...++.+.+++ +..|+..+|
T Consensus 110 ~~~~~~~~~~~~~~vLD~GcG~----G~----~~~~l~~~-g-----~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~ 171 (286)
T 3m70_A 110 GDVVDAAKIISPCKVLDLGCGQ----GR----NSLYLSLL-G-----YDVTSWDHNENSIAFLNETK----EKENLNIST 171 (286)
T ss_dssp HHHHHHHHHSCSCEEEEESCTT----CH----HHHHHHHT-T-----CEEEEEESCHHHHHHHHHHH----HHTTCCEEE
T ss_pred HHHHHHhhccCCCcEEEECCCC----CH----HHHHHHHC-C-----CeEEEEECCHHHHHHHHHHH----HHcCCceEE
Confidence 4566666555677899999753 32 44456665 2 48999998877776665554 445666555
Q ss_pred eeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 311 LAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 311 ~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
.. .++.++.. ++..=+|-|...+||+.++ ....+|+.+ +.|+|.-++++
T Consensus 172 ~~--~d~~~~~~------~~~fD~i~~~~~~~~~~~~---~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 172 AL--YDINAANI------QENYDFIVSTVVFMFLNRE---RVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp EE--CCGGGCCC------CSCEEEEEECSSGGGSCGG---GHHHHHHHHHHTEEEEEEEEE
T ss_pred EE--eccccccc------cCCccEEEEccchhhCCHH---HHHHHHHHHHHhcCCCcEEEE
Confidence 43 33433322 2322233344456887542 345677666 56899765433
No 36
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=87.75 E-value=5.9 Score=40.11 Aligned_cols=116 Identities=18% Similarity=0.133 Sum_probs=63.4
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhC-C----CcEEEeeecc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGL-K----LNFEFLAVEK 315 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~l-g----ipFeF~~v~~ 315 (503)
..-+|+|+|.+. | .|. ..|+.+-+ | ..++|||+.+...++.+.+++.+.+... | -..+|..-
T Consensus 83 ~~~~VLDlGcG~----G-~~~---~~la~~~~--~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~-- 149 (383)
T 4fsd_A 83 EGATVLDLGCGT----G-RDV---YLASKLVG--E-HGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKG-- 149 (383)
T ss_dssp TTCEEEEESCTT----S-HHH---HHHHHHHT--T-TCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEES--
T ss_pred CCCEEEEecCcc----C-HHH---HHHHHHhC--C-CCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEc--
Confidence 345899999753 3 233 33333311 2 3699999999888888888887776554 3 34555432
Q ss_pred cccccCcc-cccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE-EEeecC
Q 037028 316 SLETLQAK-DINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVM-LVEQDS 374 (503)
Q Consensus 316 ~le~l~~~-~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvv-lvE~ea 374 (503)
+++++... .....++..=+|-+...||++.+ ...+|+.+ +-|+|.-.+ +.+...
T Consensus 150 d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d-----~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 150 FIENLATAEPEGVPDSSVDIVISNCVCNLSTN-----KLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CTTCGGGCBSCCCCTTCEEEEEEESCGGGCSC-----HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred cHHHhhhcccCCCCCCCEEEEEEccchhcCCC-----HHHHHHHHHHHcCCCCEEEEEEecc
Confidence 33333110 01222332323334445677653 23555555 678997444 445443
No 37
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=87.28 E-value=8.6 Score=35.20 Aligned_cols=98 Identities=17% Similarity=0.170 Sum_probs=53.8
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccC
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQ 321 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~ 321 (503)
.-+|+|+|.+. | .+...|+.+ + .++|||+.+...++.+.++. .+..++|.. .+++++.
T Consensus 54 ~~~vLDiG~G~----G----~~~~~l~~~-~-----~~v~~vD~s~~~~~~a~~~~------~~~~~~~~~--~d~~~~~ 111 (242)
T 3l8d_A 54 EAEVLDVGCGD----G----YGTYKLSRT-G-----YKAVGVDISEVMIQKGKERG------EGPDLSFIK--GDLSSLP 111 (242)
T ss_dssp TCEEEEETCTT----S----HHHHHHHHT-T-----CEEEEEESCHHHHHHHHTTT------CBTTEEEEE--CBTTBCS
T ss_pred CCeEEEEcCCC----C----HHHHHHHHc-C-----CeEEEEECCHHHHHHHHhhc------ccCCceEEE--cchhcCC
Confidence 44899999653 3 245566665 2 48999998766555544331 123344433 2333332
Q ss_pred cccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 322 AKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 322 ~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
..++..=+|-|...|||+.+ ...+|+.+ +.|+|.-++++.
T Consensus 112 -----~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 112 -----FENEQFEAIMAINSLEWTEE-----PLRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp -----SCTTCEEEEEEESCTTSSSC-----HHHHHHHHHHHEEEEEEEEEE
T ss_pred -----CCCCCccEEEEcChHhhccC-----HHHHHHHHHHHhCCCeEEEEE
Confidence 22343444455667788743 23455544 678997554443
No 38
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=86.41 E-value=4.6 Score=38.43 Aligned_cols=111 Identities=14% Similarity=0.146 Sum_probs=61.3
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC--cEE
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL--NFE 309 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi--pFe 309 (503)
.|++.+.-...-+|+|+|.|. -.+...|+.+.+ .++|||+.+...++.+.+++ +..|+ ..+
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~--------G~~~~~l~~~~~-----~~v~gvd~s~~~~~~a~~~~----~~~~~~~~~~ 117 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGW--------GATMMRAVEKYD-----VNVVGLTLSKNQANHVQQLV----ANSENLRSKR 117 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTT--------SHHHHHHHHHHC-----CEEEEEESCHHHHHHHHHHH----HTCCCCSCEE
T ss_pred HHHHHcCCCCcCEEEEECCcc--------cHHHHHHHHHcC-----CEEEEEECCHHHHHHHHHHH----HhcCCCCCeE
Confidence 355555445556899999643 235556664432 28999998877776666554 33444 344
Q ss_pred EeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcE-EEEEee
Q 037028 310 FLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKV-VMLVEQ 372 (503)
Q Consensus 310 F~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkv-vvlvE~ 372 (503)
|. ..+++++. ..=+.|+ +...|||+.++ ....+|+.+ +-|+|.- +++.+.
T Consensus 118 ~~--~~d~~~~~------~~fD~v~--~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 118 VL--LAGWEQFD------EPVDRIV--SIGAFEHFGHE---RYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp EE--ESCGGGCC------CCCSEEE--EESCGGGTCTT---THHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EE--ECChhhCC------CCeeEEE--EeCchhhcChH---HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 43 23344332 1123333 33456887542 234556555 5689974 444443
No 39
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=86.09 E-value=8.6 Score=37.20 Aligned_cols=105 Identities=13% Similarity=0.107 Sum_probs=59.4
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--EEEeeeccccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--FEFLAVEKSLE 318 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--FeF~~v~~~le 318 (503)
..-+|+|+|.+.| .+...|+.+. .| ..++|||+.+...++.+.+++ +..|++ .+|.. .++.
T Consensus 118 ~~~~vLDiGcG~G--------~~~~~la~~~--~~-~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v~~~~--~d~~ 180 (305)
T 3ocj_A 118 PGCVVASVPCGWM--------SELLALDYSA--CP-GVQLVGIDYDPEALDGATRLA----AGHALAGQITLHR--QDAW 180 (305)
T ss_dssp TTCEEEETTCTTC--------HHHHTSCCTT--CT-TCEEEEEESCHHHHHHHHHHH----TTSTTGGGEEEEE--CCGG
T ss_pred CCCEEEEecCCCC--------HHHHHHHHhc--CC-CCeEEEEECCHHHHHHHHHHH----HhcCCCCceEEEE--Cchh
Confidence 3457999996533 2344454221 23 489999998877776665554 556665 55543 3343
Q ss_pred ccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 319 TLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 319 ~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
++.. . +..=+|-|..-+||+.+. .....+|+.+ +.|+|.-.+++
T Consensus 181 ~~~~-----~-~~fD~v~~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 181 KLDT-----R-EGYDLLTSNGLNIYEPDD--ARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp GCCC-----C-SCEEEEECCSSGGGCCCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCc-----c-CCeEEEEECChhhhcCCH--HHHHHHHHHHHHhcCCCeEEEE
Confidence 3321 1 333334445566887653 1223466666 56899866665
No 40
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=85.50 E-value=8.5 Score=36.18 Aligned_cols=129 Identities=12% Similarity=0.052 Sum_probs=73.9
Q ss_pred HHHHhccchhhhhHhhhHHHHhhhc-CCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHH
Q 037028 214 LVYEICPQIQFGHFVANASILEAFE-GESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGE 292 (503)
Q Consensus 214 ~~~e~~P~~kfahftANqAILEA~~-g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~ 292 (503)
-.|+..+...-.+......+++.+. -...-+|+|+|.|. -.+...|+.+ | ..++|||+.+...++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~--------G~~~~~la~~----~-~~~v~gvD~s~~~~~~ 84 (267)
T 3kkz_A 18 DFFSNMERQGPGSPEVTLKALSFIDNLTEKSLIADIGCGT--------GGQTMVLAGH----V-TGQVTGLDFLSGFIDI 84 (267)
T ss_dssp HHHHTSSCSSSCCHHHHHHHHTTCCCCCTTCEEEEETCTT--------CHHHHHHHTT----C-SSEEEEEESCHHHHHH
T ss_pred HHHhhccccCCCCHHHHHHHHHhcccCCCCCEEEEeCCCC--------CHHHHHHHhc----c-CCEEEEEeCCHHHHHH
Confidence 3445554444444444555666665 23456899999643 2455667765 2 3699999988777766
Q ss_pred HHHHHHHHHhhCCCc--EEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE-
Q 037028 293 IGDELKRYADGLKLN--FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVM- 368 (503)
Q Consensus 293 tg~rL~~fA~~lgip--FeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvv- 368 (503)
+.+++ +..|++ .+|.. .+++++. ..++..=+|-|...+||+ + ...+|+.+ +-|+|.-++
T Consensus 85 a~~~~----~~~~~~~~v~~~~--~d~~~~~-----~~~~~fD~i~~~~~~~~~-~-----~~~~l~~~~~~LkpgG~l~ 147 (267)
T 3kkz_A 85 FNRNA----RQSGLQNRVTGIV--GSMDDLP-----FRNEELDLIWSEGAIYNI-G-----FERGLNEWRKYLKKGGYLA 147 (267)
T ss_dssp HHHHH----HHTTCTTTEEEEE--CCTTSCC-----CCTTCEEEEEESSCGGGT-C-----HHHHHHHHGGGEEEEEEEE
T ss_pred HHHHH----HHcCCCcCcEEEE--cChhhCC-----CCCCCEEEEEEcCCceec-C-----HHHHHHHHHHHcCCCCEEE
Confidence 66554 445664 55543 2343332 223434445555667887 2 23555555 568997444
Q ss_pred EEee
Q 037028 369 LVEQ 372 (503)
Q Consensus 369 lvE~ 372 (503)
+.+.
T Consensus 148 ~~~~ 151 (267)
T 3kkz_A 148 VSEC 151 (267)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4443
No 41
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=85.25 E-value=2.7 Score=38.13 Aligned_cols=109 Identities=17% Similarity=0.258 Sum_probs=60.3
Q ss_pred hHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEE
Q 037028 230 NASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFE 309 (503)
Q Consensus 230 NqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFe 309 (503)
-+.+++.+.....-.|+|+|.|. | .+...|+.+ ..++|||+.+...++.+.+++. -+ .+
T Consensus 34 ~~~~l~~~~~~~~~~vLDiGcG~----G----~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~-----~~--~~ 92 (220)
T 3hnr_A 34 YEDILEDVVNKSFGNVLEFGVGT----G----NLTNKLLLA------GRTVYGIEPSREMRMIAKEKLP-----KE--FS 92 (220)
T ss_dssp HHHHHHHHHHTCCSEEEEECCTT----S----HHHHHHHHT------TCEEEEECSCHHHHHHHHHHSC-----TT--CC
T ss_pred HHHHHHHhhccCCCeEEEeCCCC----C----HHHHHHHhC------CCeEEEEeCCHHHHHHHHHhCC-----Cc--eE
Confidence 34666666655677899999753 3 345556665 2589999988766665554432 12 23
Q ss_pred EeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 310 FLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 310 F~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
|. ..+++++... ..=+.|+.+ ..|||+.+.. ...+|+.+ +.|+|.-.+++
T Consensus 93 ~~--~~d~~~~~~~----~~fD~v~~~--~~l~~~~~~~---~~~~l~~~~~~LkpgG~l~i 143 (220)
T 3hnr_A 93 IT--EGDFLSFEVP----TSIDTIVST--YAFHHLTDDE---KNVAIAKYSQLLNKGGKIVF 143 (220)
T ss_dssp EE--SCCSSSCCCC----SCCSEEEEE--SCGGGSCHHH---HHHHHHHHHHHSCTTCEEEE
T ss_pred EE--eCChhhcCCC----CCeEEEEEC--cchhcCChHH---HHHHHHHHHHhcCCCCEEEE
Confidence 32 2233333221 222444444 5568876531 12355555 67899744443
No 42
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=84.83 E-value=2.6 Score=40.04 Aligned_cols=101 Identities=14% Similarity=0.138 Sum_probs=61.3
Q ss_pred EEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccCcc
Q 037028 244 HVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQAK 323 (503)
Q Consensus 244 HIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~~~ 323 (503)
+|+|+|. .|-+|--.++.+ .| ..+++|++-+...++-+.++ |+..|+...+... +....
T Consensus 52 ~VLDlGC--------G~GplAl~l~~~---~p-~a~~~A~Di~~~~leiar~~----~~~~g~~~~v~~~--d~~~~--- 110 (200)
T 3fzg_A 52 SILDFGC--------GFNPLALYQWNE---NE-KIIYHAYDIDRAEIAFLSSI----IGKLKTTIKYRFL--NKESD--- 110 (200)
T ss_dssp EEEEETC--------TTHHHHHHHHCS---SC-CCEEEEECSCHHHHHHHHHH----HHHSCCSSEEEEE--CCHHH---
T ss_pred eEEEecC--------CCCHHHHHHHhc---CC-CCEEEEEeCCHHHHHHHHHH----HHhcCCCccEEEe--ccccc---
Confidence 7899995 455666666654 34 46999999887777766665 4667776444332 11110
Q ss_pred cccccCCcEEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEee
Q 037028 324 DINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLVEQ 372 (503)
Q Consensus 324 ~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~PkvvvlvE~ 372 (503)
..++..=+|=...-||+| ++..+ .+.+.++.|+|..+++.=+
T Consensus 111 ---~~~~~~DvVLa~k~LHlL-~~~~~---al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 111 ---VYKGTYDVVFLLKMLPVL-KQQDV---NILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp ---HTTSEEEEEEEETCHHHH-HHTTC---CHHHHHHTCEEEEEEEEEE
T ss_pred ---CCCCCcChhhHhhHHHhh-hhhHH---HHHHHHHHhCCCCEEEEeC
Confidence 122222222233346888 65433 4558889999998887744
No 43
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=84.16 E-value=3.1 Score=41.96 Aligned_cols=108 Identities=18% Similarity=0.208 Sum_probs=58.9
Q ss_pred HHHHhhhc-CCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEE
Q 037028 231 ASILEAFE-GESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFE 309 (503)
Q Consensus 231 qAILEA~~-g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFe 309 (503)
..|++.+. -...-+|+|+|-+ .|. +...|+.+- | .+++|+++.+ ..+ +.|+.. -..+
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G----~G~----~~~~l~~~~---p-~~~~~~~D~~-~~~--------~~a~~~-~~v~ 247 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGG----VGA----TVAAIAAHY---P-TIKGVNFDLP-HVI--------SEAPQF-PGVT 247 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCT----TSH----HHHHHHHHC---T-TCEEEEEECH-HHH--------TTCCCC-TTEE
T ss_pred HHHHHhcccccCCCEEEEeCCC----CCH----HHHHHHHHC---C-CCeEEEecCH-HHH--------Hhhhhc-CCeE
Confidence 45777776 3456799999964 342 344555442 3 5899999873 222 223322 1345
Q ss_pred EeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCc-EEEEEeec
Q 037028 310 FLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPK-VVMLVEQD 373 (503)
Q Consensus 310 F~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pk-vvvlvE~e 373 (503)
|..- ++.+ + + ..+++++ +...||+..++ ....+|+.+ +.|+|. .++++|.-
T Consensus 248 ~~~~--D~~~--~--~--p~~D~v~--~~~vlh~~~d~---~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 248 HVGG--DMFK--E--V--PSGDTIL--MKWILHDWSDQ---HCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp EEEC--CTTT--C--C--CCCSEEE--EESCGGGSCHH---HHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEeC--CcCC--C--C--CCCCEEE--ehHHhccCCHH---HHHHHHHHHHHHcCCCCEEEEEEec
Confidence 5432 2222 1 1 1235544 34457887653 234677777 568996 45555644
No 44
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=83.79 E-value=11 Score=35.76 Aligned_cols=106 Identities=17% Similarity=0.265 Sum_probs=58.1
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEE
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEF 310 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF 310 (503)
+.+++.+.-...-.|+|+|.+. |. +...|+. + ..++|||+.+...++...+++ -++. |
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~----G~----~~~~l~~-~-----~~~v~gvD~s~~~~~~a~~~~------~~~~--~ 104 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGT----GQ----LTEKIAQ-S-----GAEVLGTDNAATMIEKARQNY------PHLH--F 104 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTT----SH----HHHHHHH-T-----TCEEEEEESCHHHHHHHHHHC------TTSC--E
T ss_pred HHHHHHhCCCCCCEEEEecCCC----CH----HHHHHHh-C-----CCeEEEEECCHHHHHHHHhhC------CCCE--E
Confidence 3455666555556899999753 32 3334444 2 358999998876666555443 1333 3
Q ss_pred eeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 311 LAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 311 ~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
.. .+++++.. ++..=+|-+...|||+.+ ...+|+.+ +-|+|.-.+++.
T Consensus 105 ~~--~d~~~~~~------~~~fD~v~~~~~l~~~~d-----~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 105 DV--ADARNFRV------DKPLDAVFSNAMLHWVKE-----PEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp EE--CCTTTCCC------SSCEEEEEEESCGGGCSC-----HHHHHHHHHHHEEEEEEEEEE
T ss_pred EE--CChhhCCc------CCCcCEEEEcchhhhCcC-----HHHHHHHHHHhcCCCcEEEEE
Confidence 22 23333321 232323334556788753 23455554 678997555553
No 45
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=83.64 E-value=5.9 Score=38.90 Aligned_cols=101 Identities=18% Similarity=0.192 Sum_probs=62.2
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccC
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQ 321 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~ 321 (503)
--.|+|+|.|+|+ |--.+ + | ..+++|++-+...++-. .+++...|+++.|.... + .
T Consensus 106 p~~VLDlGCG~gp--------Lal~~--~----~-~~~y~a~DId~~~i~~a----r~~~~~~g~~~~~~v~D--~---~ 161 (253)
T 3frh_A 106 PRRVLDIACGLNP--------LALYE--R----G-IASVWGCDIHQGLGDVI----TPFAREKDWDFTFALQD--V---L 161 (253)
T ss_dssp CSEEEEETCTTTH--------HHHHH--T----T-CSEEEEEESBHHHHHHH----HHHHHHTTCEEEEEECC--T---T
T ss_pred CCeEEEecCCccH--------HHHHh--c----c-CCeEEEEeCCHHHHHHH----HHHHHhcCCCceEEEee--c---c
Confidence 3489999986551 22122 2 3 48999999776655444 44567779999887542 1 1
Q ss_pred cccccccCCcEEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEee
Q 037028 322 AKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLVEQ 372 (503)
Q Consensus 322 ~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~PkvvvlvE~ 372 (503)
...+. .+.+++.++-. +|||-++..+ ..++.+..|+|..|++.=+
T Consensus 162 ~~~~~-~~~DvvLllk~--lh~LE~q~~~---~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 162 CAPPA-EAGDLALIFKL--LPLLEREQAG---SAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp TSCCC-CBCSEEEEESC--HHHHHHHSTT---HHHHHHHHCBCSEEEEEEE
T ss_pred cCCCC-CCcchHHHHHH--HHHhhhhchh---hHHHHHHHhcCCCEEEEcC
Confidence 11111 24556656544 4888665544 4557778999988777654
No 46
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=82.92 E-value=33 Score=33.02 Aligned_cols=140 Identities=13% Similarity=0.144 Sum_probs=73.6
Q ss_pred HHHHHhccchhhhhHhhhHHHHhh----hc-CCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCc
Q 037028 213 SLVYEICPQIQFGHFVANASILEA----FE-GESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCS 287 (503)
Q Consensus 213 ~~~~e~~P~~kfahftANqAILEA----~~-g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~ 287 (503)
+.+.++.|-+. ....+|+..++. +. ....-+|+|+|.|.- ..| .+ .+.++.+ -| ..|+|+|+.+.
T Consensus 45 ~~~~~~~p~~~-~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~p-t~G-~~---~~~~~~~---~p-~~~v~~vD~sp 114 (274)
T 2qe6_A 45 DYACKHIPGLK-ESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLP-TVQ-NT---HEVAQSV---NP-DARVVYVDIDP 114 (274)
T ss_dssp HHHHHHSTTHH-HHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSC-CSS-CH---HHHHHHH---CT-TCEEEEEESSH
T ss_pred HHHHHhcchhH-HHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCC-CCC-hH---HHHHHHh---CC-CCEEEEEECCh
Confidence 34445555443 223445554443 33 222348999996420 003 22 2333332 13 47999999987
Q ss_pred hhHHHHHHHHHHHHhhCCCcEEEeeecccccccCc--------ccccccCCcEEEEEeccccccccccccchHHHHHHHH
Q 037028 288 ERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQA--------KDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL 359 (503)
Q Consensus 288 ~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~~--------~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I 359 (503)
..++...+++.. .-..+|.. .++.+... +.+ ..+...+|-+..-|||+.++ ....+|+.+
T Consensus 115 ~~l~~Ar~~~~~-----~~~v~~~~--~D~~~~~~~~~~~~~~~~~--d~~~~d~v~~~~vlh~~~d~---~~~~~l~~~ 182 (274)
T 2qe6_A 115 MVLTHGRALLAK-----DPNTAVFT--ADVRDPEYILNHPDVRRMI--DFSRPAAIMLVGMLHYLSPD---VVDRVVGAY 182 (274)
T ss_dssp HHHHHHHHHHTT-----CTTEEEEE--CCTTCHHHHHHSHHHHHHC--CTTSCCEEEETTTGGGSCTT---THHHHHHHH
T ss_pred HHHHHHHHhcCC-----CCCeEEEE--eeCCCchhhhccchhhccC--CCCCCEEEEEechhhhCCcH---HHHHHHHHH
Confidence 777776666621 11345543 23332210 111 12345666677788999864 245677777
Q ss_pred Hh-cCCc-EEEEEeecC
Q 037028 360 HQ-LSPK-VVMLVEQDS 374 (503)
Q Consensus 360 r~-L~Pk-vvvlvE~ea 374 (503)
++ |+|. .+++.+...
T Consensus 183 ~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 183 RDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHSCTTCEEEEEEEBC
T ss_pred HHhCCCCcEEEEEEecC
Confidence 65 9996 455555443
No 47
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=82.82 E-value=2.5 Score=39.33 Aligned_cols=94 Identities=13% Similarity=0.175 Sum_probs=49.5
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccC
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQ 321 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~ 321 (503)
.-+|+|+|.+.| .+...|+.+ + .++|||+.+...++.+.++ ++|.. .+.+++.
T Consensus 42 ~~~vLDiGcG~G--------~~~~~l~~~-~-----~~v~gvD~s~~~~~~a~~~-----------~~~~~--~d~~~~~ 94 (240)
T 3dli_A 42 CRRVLDIGCGRG--------EFLELCKEE-G-----IESIGVDINEDMIKFCEGK-----------FNVVK--SDAIEYL 94 (240)
T ss_dssp CSCEEEETCTTT--------HHHHHHHHH-T-----CCEEEECSCHHHHHHHHTT-----------SEEEC--SCHHHHH
T ss_pred CCeEEEEeCCCC--------HHHHHHHhC-C-----CcEEEEECCHHHHHHHHhh-----------cceee--ccHHHHh
Confidence 357999996432 345566665 2 3689999876555444333 33332 2222210
Q ss_pred cccccccCC--cEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 322 AKDINVEDG--EVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 322 ~~~l~~~~~--EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
. ...++ +.|+ |...|||+.++ ....+|+.+ +.|+|.-.+++
T Consensus 95 ~---~~~~~~fD~i~--~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~~ 138 (240)
T 3dli_A 95 K---SLPDKYLDGVM--ISHFVEHLDPE---RLFELLSLCYSKMKYSSYIVI 138 (240)
T ss_dssp H---TSCTTCBSEEE--EESCGGGSCGG---GHHHHHHHHHHHBCTTCCEEE
T ss_pred h---hcCCCCeeEEE--ECCchhhCCcH---HHHHHHHHHHHHcCCCcEEEE
Confidence 0 11122 3333 44566888642 245666665 67899744433
No 48
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=82.32 E-value=12 Score=34.81 Aligned_cols=112 Identities=16% Similarity=0.209 Sum_probs=64.6
Q ss_pred hhHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcE
Q 037028 229 ANASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNF 308 (503)
Q Consensus 229 ANqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipF 308 (503)
.-+.|++.+...+.-.|+|+|.+ .| .+...|+.+ + + . ++|||+.+...++.+.+++. +-..
T Consensus 32 ~~~~l~~~~~~~~~~~vLD~GcG----~G----~~~~~l~~~--~-~-~-~v~~vD~s~~~~~~a~~~~~------~~~~ 92 (253)
T 3g5l_A 32 EWHELKKMLPDFNQKTVLDLGCG----FG----WHCIYAAEH--G-A-K-KVLGIDLSERMLTEAKRKTT------SPVV 92 (253)
T ss_dssp HHHHHHTTCCCCTTCEEEEETCT----TC----HHHHHHHHT--T-C-S-EEEEEESCHHHHHHHHHHCC------CTTE
T ss_pred hHHHHHHhhhccCCCEEEEECCC----CC----HHHHHHHHc--C-C-C-EEEEEECCHHHHHHHHHhhc------cCCe
Confidence 34556666665567789999964 33 345556655 2 2 2 89999988766665555432 2344
Q ss_pred EEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 309 eF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
+|.. .+++++. ..++..=+|-|...|||+.+ ...+|+.+ +-|+|.-.+++.
T Consensus 93 ~~~~--~d~~~~~-----~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 93 CYEQ--KAIEDIA-----IEPDAYNVVLSSLALHYIAS-----FDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEE--CCGGGCC-----CCTTCEEEEEEESCGGGCSC-----HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEE--cchhhCC-----CCCCCeEEEEEchhhhhhhh-----HHHHHHHHHHHcCCCcEEEEE
Confidence 4433 2333332 22343334445557788732 34666666 558997655553
No 49
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=81.98 E-value=7.7 Score=37.05 Aligned_cols=115 Identities=16% Similarity=0.112 Sum_probs=64.2
Q ss_pred HHHHhhh----cCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC
Q 037028 231 ASILEAF----EGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL 306 (503)
Q Consensus 231 qAILEA~----~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi 306 (503)
+.|++.+ .-...-+|+|+|.+. |. +...|+.+.+ .++|||+.+...++.+.+++.+ .|+
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~----G~----~~~~l~~~~~-----~~v~gvD~s~~~~~~a~~~~~~----~~~ 130 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGY----GG----AARFLVRKFG-----VSIDCLNIAPVQNKRNEEYNNQ----AGL 130 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTT----SH----HHHHHHHHHC-----CEEEEEESCHHHHHHHHHHHHH----HTC
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCC----CH----HHHHHHHHhC-----CEEEEEeCCHHHHHHHHHHHHh----cCC
Confidence 3455555 334556899999643 32 3344554422 3899999887777666665433 343
Q ss_pred c--EEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCc-EEEEEeecC
Q 037028 307 N--FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPK-VVMLVEQDS 374 (503)
Q Consensus 307 p--FeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pk-vvvlvE~ea 374 (503)
+ ++|.. .+++++. ..++..=+|-+...|||+.+ ...+|+.+ +-|+|. .+++++...
T Consensus 131 ~~~~~~~~--~d~~~~~-----~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 131 ADNITVKY--GSFLEIP-----CEDNSYDFIWSQDAFLHSPD-----KLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp TTTEEEEE--CCTTSCS-----SCTTCEEEEEEESCGGGCSC-----HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CcceEEEE--cCcccCC-----CCCCCEeEEEecchhhhcCC-----HHHHHHHHHHHcCCCeEEEEEEecc
Confidence 2 55543 2333332 23344445556667788764 24555555 568996 444455443
No 50
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=81.83 E-value=25 Score=30.78 Aligned_cols=110 Identities=16% Similarity=0.169 Sum_probs=61.1
Q ss_pred hHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC-cE
Q 037028 230 NASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL-NF 308 (503)
Q Consensus 230 NqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi-pF 308 (503)
++.|++.+...+.-+|+|+|.+. |. +...|+.+ + .++|||+.+...++.+.+++.+ .++ ..
T Consensus 21 ~~~l~~~~~~~~~~~vLdiG~G~----G~----~~~~l~~~-~-----~~v~~vD~s~~~~~~a~~~~~~----~~~~~~ 82 (199)
T 2xvm_A 21 HSEVLEAVKVVKPGKTLDLGCGN----GR----NSLYLAAN-G-----YDVDAWDKNAMSIANVERIKSI----ENLDNL 82 (199)
T ss_dssp CHHHHHHTTTSCSCEEEEETCTT----SH----HHHHHHHT-T-----CEEEEEESCHHHHHHHHHHHHH----HTCTTE
T ss_pred cHHHHHHhhccCCCeEEEEcCCC----CH----HHHHHHHC-C-----CeEEEEECCHHHHHHHHHHHHh----CCCCCc
Confidence 34566666544455999999653 32 34456655 2 4899999887777666655433 344 34
Q ss_pred EEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE
Q 037028 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVM 368 (503)
Q Consensus 309 eF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvv 368 (503)
+|.. .++.++. . ++..=+|-+...+||+..+ ....+|+.+ +.|+|.-.+
T Consensus 83 ~~~~--~d~~~~~-----~-~~~~D~v~~~~~l~~~~~~---~~~~~l~~~~~~L~~gG~l 132 (199)
T 2xvm_A 83 HTRV--VDLNNLT-----F-DRQYDFILSTVVLMFLEAK---TIPGLIANMQRCTKPGGYN 132 (199)
T ss_dssp EEEE--CCGGGCC-----C-CCCEEEEEEESCGGGSCGG---GHHHHHHHHHHTEEEEEEE
T ss_pred EEEE--cchhhCC-----C-CCCceEEEEcchhhhCCHH---HHHHHHHHHHHhcCCCeEE
Confidence 5533 2333332 1 2222222344456877532 235566665 568997553
No 51
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=81.10 E-value=5.2 Score=36.39 Aligned_cols=115 Identities=17% Similarity=0.161 Sum_probs=63.4
Q ss_pred HhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC-cEEEee
Q 037028 234 LEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL-NFEFLA 312 (503)
Q Consensus 234 LEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi-pFeF~~ 312 (503)
++.+.....-+|+|+|.|.| .+...|+.+. | ..++|||+.+...++.+.++..+-++..++ .++|..
T Consensus 20 ~~~l~~~~~~~vLDiGcG~G--------~~~~~la~~~---p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~ 87 (218)
T 3mq2_A 20 FEQLRSQYDDVVLDVGTGDG--------KHPYKVARQN---P-SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLW 87 (218)
T ss_dssp HHHHHTTSSEEEEEESCTTC--------HHHHHHHHHC---T-TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEE
T ss_pred HHHhhccCCCEEEEecCCCC--------HHHHHHHHHC---C-CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEe
Confidence 34444456678999996533 3444455542 3 489999999887777666655555555666 355543
Q ss_pred ecccccccCcccccccCCcEEEEEecc-cc--ccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 313 VEKSLETLQAKDINVEDGEVLVMNSIL-EL--HCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 313 v~~~le~l~~~~l~~~~~EaLaVN~~~-~L--h~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
.+++++.... .. +.+.++..+ .+ ||+.+ . ..+|+.+ +-|+|.-.+++.
T Consensus 88 --~d~~~l~~~~---~~-d~v~~~~~~~~~~~~~~~~-~----~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 88 --ATAERLPPLS---GV-GELHVLMPWGSLLRGVLGS-S----PEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp --CCSTTCCSCC---CE-EEEEEESCCHHHHHHHHTS-S----SHHHHHHHHTEEEEEEEEEE
T ss_pred --cchhhCCCCC---CC-CEEEEEccchhhhhhhhcc-H----HHHHHHHHHHcCCCcEEEEE
Confidence 3444443211 12 333333322 22 24333 2 2455555 678998666663
No 52
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=81.05 E-value=8.6 Score=34.69 Aligned_cols=109 Identities=10% Similarity=0.190 Sum_probs=62.9
Q ss_pred HHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEee
Q 037028 233 ILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLA 312 (503)
Q Consensus 233 ILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~ 312 (503)
|.+.+.....-+|+|+|.+. | .+...|+.+ .-++|||+.+...++.+.+++.+ .+ .++|..
T Consensus 43 l~~~~~~~~~~~vLDiGcG~----G----~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~----~~-~~~~~~ 103 (216)
T 3ofk_A 43 LRLSLSSGAVSNGLEIGCAA----G----AFTEKLAPH------CKRLTVIDVMPRAIGRACQRTKR----WS-HISWAA 103 (216)
T ss_dssp HHHHTTTSSEEEEEEECCTT----S----HHHHHHGGG------EEEEEEEESCHHHHHHHHHHTTT----CS-SEEEEE
T ss_pred HHHHcccCCCCcEEEEcCCC----C----HHHHHHHHc------CCEEEEEECCHHHHHHHHHhccc----CC-CeEEEE
Confidence 44445556778999999753 3 344556654 25899999887777666655432 22 444433
Q ss_pred ecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 313 VEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 313 v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
.+++++.+ ++..=+|-|...|||+.+. ..+..+|+.+ +.|+|.-++++
T Consensus 104 --~d~~~~~~------~~~fD~v~~~~~l~~~~~~--~~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 104 --TDILQFST------AELFDLIVVAEVLYYLEDM--TQMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp --CCTTTCCC------SCCEEEEEEESCGGGSSSH--HHHHHHHHHHHHTEEEEEEEEE
T ss_pred --cchhhCCC------CCCccEEEEccHHHhCCCH--HHHHHHHHHHHHHcCCCCEEEE
Confidence 23443331 2323344445667888742 2234555555 67899865555
No 53
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=80.62 E-value=7.7 Score=39.55 Aligned_cols=124 Identities=11% Similarity=0.103 Sum_probs=66.8
Q ss_pred hhhHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc
Q 037028 228 VANASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN 307 (503)
Q Consensus 228 tANqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip 307 (503)
...+.+++.+.....-+|+|+|.|.| .+...|+.+. | ..++|+|+.+...++.+.+++...--.-.+.
T Consensus 209 ~~~~~ll~~l~~~~~~~VLDlGcG~G--------~~s~~la~~~---p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~ 276 (375)
T 4dcm_A 209 IGARFFMQHLPENLEGEIVDLGCGNG--------VIGLTLLDKN---P-QAKVVFVDESPMAVASSRLNVETNMPEALDR 276 (375)
T ss_dssp HHHHHHHHTCCCSCCSEEEEETCTTC--------HHHHHHHHHC---T-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGG
T ss_pred HHHHHHHHhCcccCCCeEEEEeCcch--------HHHHHHHHHC---C-CCEEEEEECcHHHHHHHHHHHHHcCCCcCce
Confidence 34456788887666678999997543 3444455542 3 4799999988777777766654322111134
Q ss_pred EEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 308 FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 308 FeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
++|..- ++.+ .+.-..=+.|+.|-.| |+...........+++.+ +.|+|.-.+++.
T Consensus 277 v~~~~~--D~~~----~~~~~~fD~Ii~nppf--h~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 277 CEFMIN--NALS----GVEPFRFNAVLCNPPF--HQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp EEEEEC--STTT----TCCTTCEEEEEECCCC---------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEec--hhhc----cCCCCCeeEEEECCCc--ccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 566432 2221 1111112467777665 442221112234566666 458997555553
No 54
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=80.53 E-value=11 Score=36.39 Aligned_cols=113 Identities=15% Similarity=0.218 Sum_probs=62.9
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--E
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--F 308 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--F 308 (503)
+.|++.+.-...-+|+|+|.|. | .+...|+.+.+ .++|||+.+...++.+.+++ +..|++ .
T Consensus 80 ~~~~~~~~~~~~~~vLDiGcG~----G----~~~~~la~~~~-----~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v 142 (318)
T 2fk8_A 80 DLNLDKLDLKPGMTLLDIGCGW----G----TTMRRAVERFD-----VNVIGLTLSKNQHARCEQVL----ASIDTNRSR 142 (318)
T ss_dssp HHHHTTSCCCTTCEEEEESCTT----S----HHHHHHHHHHC-----CEEEEEESCHHHHHHHHHHH----HTSCCSSCE
T ss_pred HHHHHhcCCCCcCEEEEEcccc----h----HHHHHHHHHCC-----CEEEEEECCHHHHHHHHHHH----HhcCCCCce
Confidence 3456655545566899999643 2 34445555432 38999998877776665554 344543 4
Q ss_pred EEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcE-EEEEeec
Q 037028 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKV-VMLVEQD 373 (503)
Q Consensus 309 eF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkv-vvlvE~e 373 (503)
+|. ..+++++. ..=++|+. ...|||+..+ ....+|+.+ +-|+|.- +++.+..
T Consensus 143 ~~~--~~d~~~~~------~~fD~v~~--~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 143 QVL--LQGWEDFA------EPVDRIVS--IEAFEHFGHE---NYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp EEE--ESCGGGCC------CCCSEEEE--ESCGGGTCGG---GHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred EEE--ECChHHCC------CCcCEEEE--eChHHhcCHH---HHHHHHHHHHHhcCCCcEEEEEEec
Confidence 443 23344432 11234443 3456887542 234566555 6689974 4444443
No 55
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=80.24 E-value=14 Score=35.05 Aligned_cols=109 Identities=17% Similarity=0.214 Sum_probs=61.4
Q ss_pred HHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--EEE
Q 037028 233 ILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--FEF 310 (503)
Q Consensus 233 ILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--FeF 310 (503)
+++.+... .-+|+|+|.|. | .+...|+.+ + .++|||+.+...++.+.+++ +..|++ .+|
T Consensus 61 ~l~~~~~~-~~~vLDiGcG~----G----~~~~~l~~~-~-----~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v~~ 121 (285)
T 4htf_A 61 VLAEMGPQ-KLRVLDAGGGE----G----QTAIKMAER-G-----HQVILCDLSAQMIDRAKQAA----EAKGVSDNMQF 121 (285)
T ss_dssp HHHHTCSS-CCEEEEETCTT----C----HHHHHHHHT-T-----CEEEEEESCHHHHHHHHHHH----HC-CCGGGEEE
T ss_pred HHHhcCCC-CCEEEEeCCcc----h----HHHHHHHHC-C-----CEEEEEECCHHHHHHHHHHH----HhcCCCcceEE
Confidence 44444433 56899999653 3 345556665 2 58999998877776665554 445653 444
Q ss_pred eeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 311 LAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 311 ~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
.. .+++++.+ ..++..=+|-|...|||+.+. ..+|+.+ +-|+|.-++++.
T Consensus 122 ~~--~d~~~~~~----~~~~~fD~v~~~~~l~~~~~~-----~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 122 IH--CAAQDVAS----HLETPVDLILFHAVLEWVADP-----RSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp EE--SCGGGTGG----GCSSCEEEEEEESCGGGCSCH-----HHHHHHHHHTEEEEEEEEEE
T ss_pred EE--cCHHHhhh----hcCCCceEEEECchhhcccCH-----HHHHHHHHHHcCCCeEEEEE
Confidence 33 33443321 122333344455667887532 3555555 568997555543
No 56
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=80.12 E-value=4.1 Score=38.82 Aligned_cols=123 Identities=13% Similarity=0.113 Sum_probs=64.5
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCC-CcEE
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLK-LNFE 309 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lg-ipFe 309 (503)
+.|++.+.....-+|+|+|.|.| . +...|+.+ | .++|||+.+...++.+.+++.+.....+ ..++
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G-----~---~~~~l~~~--~----~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~ 112 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTG-----V---DSIMLVEE--G----FSVTSVDASDKMLKYALKERWNRRKEPAFDKWV 112 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTS-----H---HHHHHHHT--T----CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCE
T ss_pred HHHHHHhcccCCCEEEEecCCCC-----H---HHHHHHHC--C----CeEEEEECCHHHHHHHHHhhhhcccccccceee
Confidence 33444444445678999997543 2 33445554 2 2899999988777777666533222111 1233
Q ss_pred EeeecccccccCcccccccCCcEEEEEec-ccccccccc--ccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 310 FLAVEKSLETLQAKDINVEDGEVLVMNSI-LELHCVVKE--SRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 310 F~~v~~~le~l~~~~l~~~~~EaLaVN~~-~~Lh~l~~e--s~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
|.. .++.++.. ++ ..++..=+|-|. ..|||+.+- .......+|+.+ +.|+|.-.+++.
T Consensus 113 ~~~--~d~~~~~~-~~-~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 113 IEE--ANWLTLDK-DV-PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp EEE--CCGGGHHH-HS-CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred Eee--cChhhCcc-cc-ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 322 23333221 11 223334344454 577888751 112345666666 568997555543
No 57
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=79.91 E-value=6.4 Score=41.54 Aligned_cols=120 Identities=10% Similarity=0.112 Sum_probs=64.3
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHH---HHhhCCCc
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKR---YADGLKLN 307 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~---fA~~lgip 307 (503)
+.|++.+.-...=+|+|+|-|.| .+.-.+|.+.+ .-+++||+.+...++.+.+.+.+ .++..|+.
T Consensus 163 ~~il~~l~l~~gd~VLDLGCGtG--------~l~l~lA~~~g----~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~ 230 (438)
T 3uwp_A 163 AQMIDEIKMTDDDLFVDLGSGVG--------QVVLQVAAATN----CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK 230 (438)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTS--------HHHHHHHHHCC----CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC
T ss_pred HHHHHhcCCCCCCEEEEeCCCCC--------HHHHHHHHHCC----CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 44666665455557999996543 23333444432 24899999886555554444433 35566652
Q ss_pred -EEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEE
Q 037028 308 -FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLV 370 (503)
Q Consensus 308 -FeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~Pkvvvlv 370 (503)
-.+..+..++.++...+ .+..=.+|++|..+ +. +.....+....+.|+|.-.+++
T Consensus 231 ~~rVefi~GD~~~lp~~d-~~~~aDVVf~Nn~~--F~-----pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 231 HAEYTLERGDFLSEEWRE-RIANTSVIFVNNFA--FG-----PEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp CCEEEEEECCTTSHHHHH-HHHTCSEEEECCTT--CC-----HHHHHHHHHHHTTSCTTCEEEE
T ss_pred CCCeEEEECcccCCcccc-ccCCccEEEEcccc--cC-----chHHHHHHHHHHcCCCCcEEEE
Confidence 23333444444433211 11233577777654 21 1223456666788999754444
No 58
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=79.66 E-value=13 Score=35.69 Aligned_cols=111 Identities=12% Similarity=0.101 Sum_probs=61.5
Q ss_pred CceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccc
Q 037028 240 ESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLET 319 (503)
Q Consensus 240 ~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~ 319 (503)
...-+|+|+|.|. | .+...|+.+- +| ..++|||+.+...++.+.+++.+. ....-..+|.. .++++
T Consensus 35 ~~~~~vLDiGcG~----G----~~~~~la~~~--~~-~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~v~~~~--~d~~~ 100 (299)
T 3g5t_A 35 GERKLLVDVGCGP----G----TATLQMAQEL--KP-FEQIIGSDLSATMIKTAEVIKEGS-PDTYKNVSFKI--SSSDD 100 (299)
T ss_dssp SCCSEEEEETCTT----T----HHHHHHHHHS--SC-CSEEEEEESCHHHHHHHHHHHHHC-C-CCTTEEEEE--CCTTC
T ss_pred CCCCEEEEECCCC----C----HHHHHHHHhC--CC-CCEEEEEeCCHHHHHHHHHHHHhc-cCCCCceEEEE--cCHHh
Confidence 3567899999653 3 3444455421 12 479999999877777776665443 11233455543 23444
Q ss_pred cCccc-ccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 320 LQAKD-INVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 320 l~~~~-l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
+.... ..+..+..=+|-|...|||+ + ...+|+.+ +.|+|.-.+++
T Consensus 101 ~~~~~~~~~~~~~fD~V~~~~~l~~~-~-----~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 101 FKFLGADSVDKQKIDMITAVECAHWF-D-----FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CGGGCTTTTTSSCEEEEEEESCGGGS-C-----HHHHHHHHHHHEEEEEEEEE
T ss_pred CCccccccccCCCeeEEeHhhHHHHh-C-----HHHHHHHHHHhcCCCcEEEE
Confidence 33211 11122445555566678998 3 23555555 56899755444
No 59
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=79.63 E-value=12 Score=36.97 Aligned_cols=146 Identities=13% Similarity=0.154 Sum_probs=81.3
Q ss_pred HHHHHHHHHhccchhhhhHhhhHHHHhhh----cCC-ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeee
Q 037028 209 DESLSLVYEICPQIQFGHFVANASILEAF----EGE-SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGV 283 (503)
Q Consensus 209 ~~A~~~~~e~~P~~kfahftANqAILEA~----~g~-~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI 283 (503)
.++-..+.+..|.++ ...-+|.+.|.-+ .++ ..=+|+|+|.+.| . ...+..++.+. -| ..|||+|
T Consensus 42 r~~~~~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~p----T--~~~~~~la~~~--~P-~arVv~V 111 (277)
T 3giw_A 42 KEAGDAMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIP----T--SPNLHEIAQSV--AP-ESRVVYV 111 (277)
T ss_dssp HHHHHHHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSC----C--SSCHHHHHHHH--CT-TCEEEEE
T ss_pred HHHHHHHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCC----c--ccHHHHHHHHH--CC-CCEEEEE
Confidence 345556678889874 3345788777653 233 2337999996431 1 22334444432 23 4799999
Q ss_pred cCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccC-----c---ccccccCCcEEEEEeccccccccccccchHHHH
Q 037028 284 GNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQ-----A---KDINVEDGEVLVMNSILELHCVVKESRGALNSV 355 (503)
Q Consensus 284 ~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~-----~---~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~ 355 (503)
+.+...|+....+|.+. -.-..+|.. .++.++. + ..+ +.++.++|-+..-|||+.++.. ...+
T Consensus 112 D~sp~mLa~Ar~~l~~~---~~~~~~~v~--aD~~~~~~~l~~~~~~~~~--D~~~p~av~~~avLH~l~d~~~--p~~~ 182 (277)
T 3giw_A 112 DNDPIVLTLSQGLLAST---PEGRTAYVE--ADMLDPASILDAPELRDTL--DLTRPVALTVIAIVHFVLDEDD--AVGI 182 (277)
T ss_dssp ECCHHHHHTTHHHHCCC---SSSEEEEEE--CCTTCHHHHHTCHHHHTTC--CTTSCCEEEEESCGGGSCGGGC--HHHH
T ss_pred eCChHHHHHHHHHhccC---CCCcEEEEE--ecccChhhhhccccccccc--CcCCcchHHhhhhHhcCCchhh--HHHH
Confidence 99887777776666421 112355543 3333321 1 112 2345445556667899987531 2355
Q ss_pred HH-HHHhcCCc-EEEEEeec
Q 037028 356 LQ-RLHQLSPK-VVMLVEQD 373 (503)
Q Consensus 356 L~-~Ir~L~Pk-vvvlvE~e 373 (503)
|+ ..+.|.|. .+++.+--
T Consensus 183 l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 183 VRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp HHHHHTTSCTTCEEEEEEEC
T ss_pred HHHHHHhCCCCcEEEEEecc
Confidence 64 44678996 55555543
No 60
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=79.32 E-value=12 Score=34.66 Aligned_cols=112 Identities=16% Similarity=0.200 Sum_probs=62.0
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--E
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--F 308 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--F 308 (503)
..|++.+.-...-+|+|+|.+. |. +...|+.+.+ .++|||+.+...++.+.+++ +..|++ .
T Consensus 26 ~~l~~~~~~~~~~~VLDiGcG~----G~----~~~~la~~~~-----~~v~gvD~s~~~l~~a~~~~----~~~~~~~~v 88 (256)
T 1nkv_A 26 ATLGRVLRMKPGTRILDLGSGS----GE----MLCTWARDHG-----ITGTGIDMSSLFTAQAKRRA----EELGVSERV 88 (256)
T ss_dssp HHHHHHTCCCTTCEEEEETCTT----CH----HHHHHHHHTC-----CEEEEEESCHHHHHHHHHHH----HHTTCTTTE
T ss_pred HHHHHhcCCCCCCEEEEECCCC----CH----HHHHHHHhcC-----CeEEEEeCCHHHHHHHHHHH----HhcCCCcce
Confidence 4455555444455899999653 33 3344555432 37899998877776665554 445654 6
Q ss_pred EEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE-EEee
Q 037028 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVM-LVEQ 372 (503)
Q Consensus 309 eF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvv-lvE~ 372 (503)
+|.. .+++++.. ++..=+|-|...+||+.+ ...+|+.+ +-|+|.-.+ +++.
T Consensus 89 ~~~~--~d~~~~~~------~~~fD~V~~~~~~~~~~~-----~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 89 HFIH--NDAAGYVA------NEKCDVAACVGATWIAGG-----FAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp EEEE--SCCTTCCC------SSCEEEEEEESCGGGTSS-----SHHHHHHHTTSEEEEEEEEEEEE
T ss_pred EEEE--CChHhCCc------CCCCCEEEECCChHhcCC-----HHHHHHHHHHHcCCCeEEEEecC
Confidence 6643 23433321 232323344556687653 23555555 568997444 4444
No 61
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=79.31 E-value=23 Score=34.22 Aligned_cols=114 Identities=11% Similarity=0.074 Sum_probs=60.6
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhh----CCCcEEEeeeccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADG----LKLNFEFLAVEKS 316 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~----lgipFeF~~v~~~ 316 (503)
+.-+|+|+|.+-| . +...|+.++ .-++|||+.+...++...+++...... ....++|. ..+
T Consensus 34 ~~~~VLDlGcG~G----~----~~~~l~~~~-----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~--~~D 98 (313)
T 3bgv_A 34 RDITVLDLGCGKG----G----DLLKWKKGR-----INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFI--TAD 98 (313)
T ss_dssp -CCEEEEETCTTT----T----THHHHHHTT-----CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEE--ECC
T ss_pred CCCEEEEECCCCc----H----HHHHHHhcC-----CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEE--Eec
Confidence 4568999996533 2 344455432 258999999888887777776544211 11234443 333
Q ss_pred ccccCcc-cccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 317 LETLQAK-DINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 317 le~l~~~-~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
++++... .+.-.++..=+|-|.+.||++..+ ......+|+.+ +.|+|.-++++
T Consensus 99 ~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~-~~~~~~~l~~~~~~LkpgG~li~ 153 (313)
T 3bgv_A 99 SSKELLIDKFRDPQMCFDICSCQFVCHYSFES-YEQADMMLRNACERLSPGGYFIG 153 (313)
T ss_dssp TTTSCSTTTCSSTTCCEEEEEEETCGGGGGGS-HHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccccchhhhcccCCCCEEEEEEecchhhccCC-HHHHHHHHHHHHHHhCCCcEEEE
Confidence 4433210 111112233344455677887321 12234667666 56899855554
No 62
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=79.18 E-value=7.9 Score=38.80 Aligned_cols=108 Identities=20% Similarity=0.203 Sum_probs=57.5
Q ss_pred HHHHhhhc-CCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEE
Q 037028 231 ASILEAFE-GESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFE 309 (503)
Q Consensus 231 qAILEA~~-g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFe 309 (503)
+.|++.+. -.+.-+|+|+|.+. | .+...|+.+- | .+++|+++. ...+ +.|+... ..+
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~----G----~~~~~l~~~~---~-~~~~~~~D~-~~~~--------~~a~~~~-~v~ 255 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGS----G----RNLELIISKY---P-LIKGINFDL-PQVI--------ENAPPLS-GIE 255 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTT----S----HHHHHHHHHC---T-TCEEEEEEC-HHHH--------TTCCCCT-TEE
T ss_pred HHHHHHhhccCCCCEEEEeCCCC----c----HHHHHHHHHC---C-CCeEEEeCh-HHHH--------HhhhhcC-CCE
Confidence 56777765 24567899999653 3 3445566553 3 589999986 3323 2233321 244
Q ss_pred EeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcE-EEEEeec
Q 037028 310 FLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKV-VMLVEQD 373 (503)
Q Consensus 310 F~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkv-vvlvE~e 373 (503)
|..- ++.+ + + ++ +=+|-+...|||+.++ ....+|+.+ +.|+|.- ++++|..
T Consensus 256 ~~~~--d~~~--~--~---~~-~D~v~~~~~lh~~~d~---~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 256 HVGG--DMFA--S--V---PQ-GDAMILKAVCHNWSDE---KCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp EEEC--CTTT--C--C---CC-EEEEEEESSGGGSCHH---HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEeC--Cccc--C--C---CC-CCEEEEecccccCCHH---HHHHHHHHHHHhcCCCCEEEEEEec
Confidence 4332 2221 1 1 11 3334455667987653 223566666 5689964 4455543
No 63
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=78.36 E-value=13 Score=34.91 Aligned_cols=114 Identities=16% Similarity=0.230 Sum_probs=63.7
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--E
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--F 308 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--F 308 (503)
..|++.+.-...-+|+|+|.+. | .+...|+.+.+ .++|||+.+...++.+.+++ +..|++ +
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~----G----~~~~~l~~~~~-----~~v~gvD~s~~~~~~a~~~~----~~~~~~~~~ 113 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGI----G----KPAVRLATARD-----VRVTGISISRPQVNQANARA----TAAGLANRV 113 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTT----S----HHHHHHHHHSC-----CEEEEEESCHHHHHHHHHHH----HHTTCTTTE
T ss_pred HHHHHhcCCCCCCEEEEeCCCC----C----HHHHHHHHhcC-----CEEEEEeCCHHHHHHHHHHH----HhcCCCcce
Confidence 3455555444556999999643 2 34445665432 58999998877776655554 344553 5
Q ss_pred EEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEE-EEEeec
Q 037028 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVV-MLVEQD 373 (503)
Q Consensus 309 eF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvv-vlvE~e 373 (503)
+|.. .+++++. ..++..=+|-+...|||+.+ ...+|+.+ +-|+|.-. ++.+..
T Consensus 114 ~~~~--~d~~~~~-----~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 114 TFSY--ADAMDLP-----FEDASFDAVWALESLHHMPD-----RGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp EEEE--CCTTSCC-----SCTTCEEEEEEESCTTTSSC-----HHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred EEEE--CccccCC-----CCCCCccEEEEechhhhCCC-----HHHHHHHHHHHcCCCeEEEEEEee
Confidence 5543 2333332 22333334445556788753 24666666 55799744 444443
No 64
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=76.92 E-value=13 Score=33.01 Aligned_cols=110 Identities=15% Similarity=0.153 Sum_probs=60.5
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC-cEEEeeeccccccc
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL-NFEFLAVEKSLETL 320 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi-pFeF~~v~~~le~l 320 (503)
.-+|+|+|.+.| ..++ . ++.+. .-++|||+.+...++.+.+++.. .|+ ..+|. ..++.++
T Consensus 45 ~~~vLDlgcG~G------~~~~-~-~~~~~-----~~~v~~vD~~~~~~~~a~~~~~~----~~~~~v~~~--~~d~~~~ 105 (189)
T 3p9n_A 45 GLAVLDLYAGSG------ALGL-E-ALSRG-----AASVLFVESDQRSAAVIARNIEA----LGLSGATLR--RGAVAAV 105 (189)
T ss_dssp TCEEEEETCTTC------HHHH-H-HHHTT-----CSEEEEEECCHHHHHHHHHHHHH----HTCSCEEEE--ESCHHHH
T ss_pred CCEEEEeCCCcC------HHHH-H-HHHCC-----CCeEEEEECCHHHHHHHHHHHHH----cCCCceEEE--EccHHHH
Confidence 347999996432 2222 2 33331 25899999887777766666543 344 34443 2333332
Q ss_pred CcccccccCCcEEEEEeccccccccccccchHHHHHHHHHh---cCCcEEEEEeecCCCC
Q 037028 321 QAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQ---LSPKVVMLVEQDSSHN 377 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~---L~PkvvvlvE~ea~~n 377 (503)
... +.-..=+.++.|..+ |+.. .....+|..+++ |+|.-+++++.+....
T Consensus 106 ~~~-~~~~~fD~i~~~~p~--~~~~----~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 106 VAA-GTTSPVDLVLADPPY--NVDS----ADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp HHH-CCSSCCSEEEECCCT--TSCH----HHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred Hhh-ccCCCccEEEECCCC--Ccch----hhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 111 111222567777664 4321 124567777764 9999888887765433
No 65
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=76.42 E-value=28 Score=32.04 Aligned_cols=101 Identities=17% Similarity=0.251 Sum_probs=55.7
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeeccccccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETL 320 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l 320 (503)
..-+|+|+|.|.| . +...|+.+ + .++|||+.+...++.+.+++ +...-.++|.. .+++++
T Consensus 39 ~~~~vLDiG~G~G-----~---~~~~l~~~-~-----~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~~--~d~~~~ 98 (263)
T 2yqz_A 39 EEPVFLELGVGTG-----R---IALPLIAR-G-----YRYIALDADAAMLEVFRQKI----AGVDRKVQVVQ--ADARAI 98 (263)
T ss_dssp SCCEEEEETCTTS-----T---THHHHHTT-T-----CEEEEEESCHHHHHHHHHHT----TTSCTTEEEEE--SCTTSC
T ss_pred CCCEEEEeCCcCC-----H---HHHHHHHC-C-----CEEEEEECCHHHHHHHHHHh----hccCCceEEEE--cccccC
Confidence 4568999997533 2 23345554 2 48999998877776666554 22233455543 233333
Q ss_pred CcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 321 QAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
. ..++..=+|-+...|||+.+ ...+|+.+ +-|+|.-.+++.
T Consensus 99 ~-----~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 99 P-----LPDESVHGVIVVHLWHLVPD-----WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp C-----SCTTCEEEEEEESCGGGCTT-----HHHHHHHHHHHEEEEEEEEEE
T ss_pred C-----CCCCCeeEEEECCchhhcCC-----HHHHHHHHHHHCCCCcEEEEE
Confidence 2 22333323344556788753 23455554 668997554443
No 66
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=75.92 E-value=11 Score=34.23 Aligned_cols=94 Identities=17% Similarity=0.187 Sum_probs=52.8
Q ss_pred eEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccCc
Q 037028 243 VHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQA 322 (503)
Q Consensus 243 VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~~ 322 (503)
-+|+|+|.+. | .+...|+.+ ++ ++|||+.+...++.+.+++.. .++|.. .+++++.
T Consensus 44 ~~vLDiGcG~----G----~~~~~l~~~--~~----~v~gvD~s~~~~~~a~~~~~~-------~v~~~~--~d~~~~~- 99 (250)
T 2p7i_A 44 GNLLELGSFK----G----DFTSRLQEH--FN----DITCVEASEEAISHAQGRLKD-------GITYIH--SRFEDAQ- 99 (250)
T ss_dssp SCEEEESCTT----S----HHHHHHTTT--CS----CEEEEESCHHHHHHHHHHSCS-------CEEEEE--SCGGGCC-
T ss_pred CcEEEECCCC----C----HHHHHHHHh--CC----cEEEEeCCHHHHHHHHHhhhC-------CeEEEE--ccHHHcC-
Confidence 3699999653 3 244556654 22 699999887666655554321 344432 3344331
Q ss_pred ccccccCCcEEEEEeccccccccccccchHHHHHHHHH--hcCCcEEEEE
Q 037028 323 KDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLH--QLSPKVVMLV 370 (503)
Q Consensus 323 ~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir--~L~Pkvvvlv 370 (503)
.++..=+|-|...|||+.+ ...+|+.++ -|+|.-.+++
T Consensus 100 -----~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 100 -----LPRRYDNIVLTHVLEHIDD-----PVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp -----CSSCEEEEEEESCGGGCSS-----HHHHHHHHHHTTEEEEEEEEE
T ss_pred -----cCCcccEEEEhhHHHhhcC-----HHHHHHHHHHHhcCCCCEEEE
Confidence 2233334445567788854 246777765 6799744443
No 67
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=75.40 E-value=24 Score=30.55 Aligned_cols=107 Identities=12% Similarity=0.198 Sum_probs=55.0
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEE
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEF 310 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF 310 (503)
..+++.+-. +.-+|+|+|.+.| .+...|+.+ + .++|+|+.+...++.+.+++. + .+|
T Consensus 37 ~~~l~~~~~-~~~~vLdiG~G~G--------~~~~~l~~~-~-----~~v~~~D~~~~~~~~a~~~~~------~--~~~ 93 (195)
T 3cgg_A 37 ARLIDAMAP-RGAKILDAGCGQG--------RIGGYLSKQ-G-----HDVLGTDLDPILIDYAKQDFP------E--ARW 93 (195)
T ss_dssp HHHHHHHSC-TTCEEEEETCTTT--------HHHHHHHHT-T-----CEEEEEESCHHHHHHHHHHCT------T--SEE
T ss_pred HHHHHHhcc-CCCeEEEECCCCC--------HHHHHHHHC-C-----CcEEEEcCCHHHHHHHHHhCC------C--CcE
Confidence 345555532 4458999996532 234455554 2 389999988766666555431 2 333
Q ss_pred eeecccccccCcccccccCC--cEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 311 LAVEKSLETLQAKDINVEDG--EVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 311 ~~v~~~le~l~~~~l~~~~~--EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
.. .++.++. ..++ +.++.+ ...+|++..+ ....+|+.+ +.|+|.-.+++.
T Consensus 94 ~~--~d~~~~~-----~~~~~~D~i~~~-~~~~~~~~~~---~~~~~l~~~~~~l~~~G~l~~~ 146 (195)
T 3cgg_A 94 VV--GDLSVDQ-----ISETDFDLIVSA-GNVMGFLAED---GREPALANIHRALGADGRAVIG 146 (195)
T ss_dssp EE--CCTTTSC-----CCCCCEEEEEEC-CCCGGGSCHH---HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EE--cccccCC-----CCCCceeEEEEC-CcHHhhcChH---HHHHHHHHHHHHhCCCCEEEEE
Confidence 22 2333221 1222 333332 1335665322 234555555 568997666554
No 68
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=74.55 E-value=9.1 Score=35.83 Aligned_cols=112 Identities=12% Similarity=0.057 Sum_probs=58.0
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc-EEEeeecccccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN-FEFLAVEKSLET 319 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip-FeF~~v~~~le~ 319 (503)
..=+|+|+|.| |=.+...||.+. | ..++|||+.+...+-+...+..+-++..|++ .+|. ..+.++
T Consensus 24 ~~~~vLDiGCG--------~G~~~~~la~~~---~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~--~~d~~~ 89 (225)
T 3p2e_A 24 FDRVHIDLGTG--------DGRNIYKLAIND---Q-NTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFV--IAAAES 89 (225)
T ss_dssp CSEEEEEETCT--------TSHHHHHHHHTC---T-TEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEE--CCBTTB
T ss_pred CCCEEEEEecc--------CcHHHHHHHHhC---C-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEE--EcCHHH
Confidence 34479999954 224566677642 3 4899999988555433333333334556664 5663 334555
Q ss_pred cCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 320 LQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 320 l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
+. .. ..+-+..|.+.+..+++..........+|+.+ |-|+|.-.++.
T Consensus 90 l~-~~---~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 90 LP-FE---LKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp CC-GG---GTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred hh-hh---ccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 52 21 12445555555433332110000012455555 56899865555
No 69
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=74.43 E-value=17 Score=36.72 Aligned_cols=113 Identities=19% Similarity=0.218 Sum_probs=63.3
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--E
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--F 308 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--F 308 (503)
++|++...-.+.-.|+|+|.|. | .+...++.+ | . -++|||+.+ ..++.+.++ ++..|++ .
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGt----G----~ls~~la~~-g--~--~~V~gvD~s-~~~~~a~~~----~~~~~~~~~v 114 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGS----G----ILAIWSAQA-G--A--RKVYAVEAT-KMADHARAL----VKANNLDHIV 114 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTT----T----HHHHHHHHT-T--C--SEEEEEESS-TTHHHHHHH----HHHTTCTTTE
T ss_pred HHHHhccccCCCCEEEEeccCc----C----HHHHHHHhc-C--C--CEEEEEccH-HHHHHHHHH----HHHcCCCCeE
Confidence 4454444444556899999753 3 233445554 2 1 399999988 666555443 4455655 4
Q ss_pred EEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 309 eF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
+| +..+++++... ..=+.|+.|.+ .|.+..+ .....+|+.+ +-|+|.-+++..
T Consensus 115 ~~--~~~d~~~~~~~----~~~D~Iv~~~~--~~~l~~e--~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 115 EV--IEGSVEDISLP----EKVDVIISEWM--GYFLLRE--SMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EE--EESCGGGCCCS----SCEEEEEECCC--BTTBTTT--CTHHHHHHHHHHHEEEEEEEESS
T ss_pred EE--EECchhhcCcC----CcceEEEEcCh--hhcccch--HHHHHHHHHHHhhCCCCeEEEEe
Confidence 44 33445544321 11134444432 3444433 2357788887 789998776654
No 70
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=74.29 E-value=9.7 Score=36.59 Aligned_cols=115 Identities=14% Similarity=0.185 Sum_probs=61.8
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEE
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEF 310 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF 310 (503)
..+++.+..... .|+|+|.+. |. +...|+.+ + .++|||+.+...++.+.+++.+....+.-.++|
T Consensus 73 ~~~~~~~~~~~~-~vLDlGcG~----G~----~~~~l~~~-~-----~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~ 137 (299)
T 3g2m_A 73 REFATRTGPVSG-PVLELAAGM----GR----LTFPFLDL-G-----WEVTALELSTSVLAAFRKRLAEAPADVRDRCTL 137 (299)
T ss_dssp HHHHHHHCCCCS-CEEEETCTT----TT----THHHHHTT-T-----CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEE
T ss_pred HHHHHhhCCCCC-cEEEEeccC----CH----HHHHHHHc-C-----CeEEEEECCHHHHHHHHHHHhhcccccccceEE
Confidence 445555554444 899999753 32 45556655 2 479999988777777666654321111133555
Q ss_pred eeecccccccCcccccccCCcE-EEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 311 LAVEKSLETLQAKDINVEDGEV-LVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 311 ~~v~~~le~l~~~~l~~~~~Ea-LaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
.. .+++++.. ++.. +||.+...+|++.. .....+|+.+ +.|+|.-.++++
T Consensus 138 ~~--~d~~~~~~------~~~fD~v~~~~~~~~~~~~---~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 138 VQ--GDMSAFAL------DKRFGTVVISSGSINELDE---ADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp EE--CBTTBCCC------SCCEEEEEECHHHHTTSCH---HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred Ee--CchhcCCc------CCCcCEEEECCcccccCCH---HHHHHHHHHHHHHcCCCcEEEEE
Confidence 43 23433321 2322 33333334565432 2245666666 568997555554
No 71
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=74.25 E-value=23 Score=33.37 Aligned_cols=109 Identities=15% Similarity=0.151 Sum_probs=56.3
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeeccccccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETL 320 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l 320 (503)
+.-+|+|+|.|. |. +...|+.++ ..++|||+.+...++.+.+++ +..|+.-....+..++.++
T Consensus 64 ~~~~vLDiGcG~----G~----~~~~l~~~~-----~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v~~~~~d~~~~ 126 (298)
T 1ri5_A 64 RGDSVLDLGCGK----GG----DLLKYERAG-----IGEYYGVDIAEVSINDARVRA----RNMKRRFKVFFRAQDSYGR 126 (298)
T ss_dssp TTCEEEEETCTT----TT----THHHHHHHT-----CSEEEEEESCHHHHHHHHHHH----HTSCCSSEEEEEESCTTTS
T ss_pred CCCeEEEECCCC----CH----HHHHHHHCC-----CCEEEEEECCHHHHHHHHHHH----HhcCCCccEEEEECCcccc
Confidence 345899999753 32 222355442 258999998877776666654 3445432222233333333
Q ss_pred CcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 321 QAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
.. . .++..=+|-|.+.||++... ......+|+.+ +-|+|.-.+++.
T Consensus 127 ~~---~-~~~~fD~v~~~~~l~~~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 127 HM---D-LGKEFDVISSQFSFHYAFST-SESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp CC---C-CSSCEEEEEEESCGGGGGSS-HHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cc---C-CCCCcCEEEECchhhhhcCC-HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 21 0 12322233344556775321 12334566665 568997555543
No 72
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=74.25 E-value=22 Score=31.64 Aligned_cols=111 Identities=17% Similarity=0.166 Sum_probs=60.5
Q ss_pred hHHHHhhhcC-CceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCC-Cc
Q 037028 230 NASILEAFEG-ESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLK-LN 307 (503)
Q Consensus 230 NqAILEA~~g-~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lg-ip 307 (503)
.+.|++.+.. ...-+|+|+|.+. | .+...|+.+ + .++|||+.+...++.+ +..| -.
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~----G----~~~~~l~~~-~-----~~v~~~D~s~~~~~~a--------~~~~~~~ 91 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGT----G----YWTRHLSGL-A-----DRVTALDGSAEMIAEA--------GRHGLDN 91 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTT----S----HHHHHHHHH-S-----SEEEEEESCHHHHHHH--------GGGCCTT
T ss_pred HHHHHHHHhcCCCCCeEEEECCCC----C----HHHHHHHhc-C-----CeEEEEeCCHHHHHHH--------HhcCCCC
Confidence 4556666652 2334999999653 3 244455554 1 4899999876544433 3344 23
Q ss_pred EEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcE-EEEEeec
Q 037028 308 FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKV-VMLVEQD 373 (503)
Q Consensus 308 FeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkv-vvlvE~e 373 (503)
.+|.. .+++++ ..++..=+|-|...|||+.++ ....+|+.+ +.|+|.- +++++..
T Consensus 92 ~~~~~--~d~~~~------~~~~~~D~v~~~~~l~~~~~~---~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 92 VEFRQ--QDLFDW------TPDRQWDAVFFAHWLAHVPDD---RFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp EEEEE--CCTTSC------CCSSCEEEEEEESCGGGSCHH---HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eEEEe--cccccC------CCCCceeEEEEechhhcCCHH---HHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 44433 233332 123333344455677988652 234566655 5789964 4444443
No 73
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=74.20 E-value=38 Score=30.61 Aligned_cols=103 Identities=15% Similarity=0.235 Sum_probs=58.9
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeeccccccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETL 320 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l 320 (503)
+.-+|+|+|.+.| . +...|+.+ + .++|||+.+...++.+.+++.+ .++.++|.. .+++++
T Consensus 37 ~~~~vLdiG~G~G----~----~~~~l~~~-~-----~~~~~~D~s~~~~~~a~~~~~~----~~~~~~~~~--~d~~~~ 96 (246)
T 1y8c_A 37 VFDDYLDLACGTG----N----LTENLCPK-F-----KNTWAVDLSQEMLSEAENKFRS----QGLKPRLAC--QDISNL 96 (246)
T ss_dssp CTTEEEEETCTTS----T----THHHHGGG-S-----SEEEEECSCHHHHHHHHHHHHH----TTCCCEEEC--CCGGGC
T ss_pred CCCeEEEeCCCCC----H----HHHHHHHC-C-----CcEEEEECCHHHHHHHHHHHhh----cCCCeEEEe--cccccC
Confidence 4568999997533 2 34455554 1 4799999887777777666533 344444432 234333
Q ss_pred CcccccccCCcEEEEEecc-ccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 321 QAKDINVEDGEVLVMNSIL-ELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~-~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
.. . +..=+|-|.. .|||+.+. .....+|+.+ +.|+|.-+++++
T Consensus 97 ~~-----~-~~fD~v~~~~~~l~~~~~~--~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 97 NI-----N-RKFDLITCCLDSTNYIIDS--DDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp CC-----S-CCEEEEEECTTGGGGCCSH--HHHHHHHHHHHTTEEEEEEEEEE
T ss_pred Cc-----c-CCceEEEEcCccccccCCH--HHHHHHHHHHHHhcCCCcEEEEE
Confidence 21 1 2222333445 67888532 1245666666 457998666664
No 74
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=73.94 E-value=19 Score=35.28 Aligned_cols=111 Identities=8% Similarity=0.189 Sum_probs=60.2
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhC---CCcEEEeeec--cc
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGL---KLNFEFLAVE--KS 316 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~l---gipFeF~~v~--~~ 316 (503)
.-+|+|+|.| .|. ++..++.+. .-++|||+.+...++.+.++..+..... -..++|.... .+
T Consensus 49 ~~~VLDlGCG----~G~----~l~~~~~~~-----~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d 115 (302)
T 2vdw_A 49 KRKVLAIDFG----NGA----DLEKYFYGE-----IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSD 115 (302)
T ss_dssp CCEEEETTCT----TTT----THHHHHHTT-----CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSS
T ss_pred CCeEEEEecC----CcH----hHHHHHhcC-----CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccc
Confidence 4589999975 332 222333322 1479999999888888877654321100 0125564321 11
Q ss_pred c--cccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 317 L--ETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 317 l--e~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
. +++.. ...++..=+|.|++.||++.+.. ....+|+.+ +.|+|.-++++
T Consensus 116 ~~~~~l~~---~~~~~~FD~V~~~~~lhy~~~~~--~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 116 TFVSSVRE---VFYFGKFNIIDWQFAIHYSFHPR--HYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp SHHHHHHT---TCCSSCEEEEEEESCGGGTCSTT--THHHHHHHHHHHEEEEEEEEE
T ss_pred hhhhhhhc---cccCCCeeEEEECchHHHhCCHH--HHHHHHHHHHHHcCCCCEEEE
Confidence 0 11110 01234444677888999875422 235666666 66999755444
No 75
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=73.72 E-value=25 Score=31.53 Aligned_cols=101 Identities=17% Similarity=0.239 Sum_probs=54.6
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccC
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQ 321 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~ 321 (503)
.-+|+|+|.|. | .+...|+.+ ++ ++|+|+.+...++.+.+++.. .+...+|.. .++.++.
T Consensus 39 ~~~vLDlG~G~----G----~~~~~l~~~--~~----~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~--~d~~~~~ 98 (227)
T 1ve3_A 39 RGKVLDLACGV----G----GFSFLLEDY--GF----EVVGVDISEDMIRKAREYAKS----RESNVEFIV--GDARKLS 98 (227)
T ss_dssp CCEEEEETCTT----S----HHHHHHHHT--TC----EEEEEESCHHHHHHHHHHHHH----TTCCCEEEE--CCTTSCC
T ss_pred CCeEEEEeccC----C----HHHHHHHHc--CC----EEEEEECCHHHHHHHHHHHHh----cCCCceEEE--CchhcCC
Confidence 45799999653 3 233455554 22 899999887777666655432 333445533 2333322
Q ss_pred cccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 322 AKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 322 ~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
+.-..=+.|+.|..+.+++..+ ...+|+.+ +.|+|.-.+++
T Consensus 99 ---~~~~~~D~v~~~~~~~~~~~~~-----~~~~l~~~~~~L~~gG~l~~ 140 (227)
T 1ve3_A 99 ---FEDKTFDYVIFIDSIVHFEPLE-----LNQVFKEVRRVLKPSGKFIM 140 (227)
T ss_dssp ---SCTTCEEEEEEESCGGGCCHHH-----HHHHHHHHHHHEEEEEEEEE
T ss_pred ---CCCCcEEEEEEcCchHhCCHHH-----HHHHHHHHHHHcCCCcEEEE
Confidence 1111224566665544555422 24555555 56899754444
No 76
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=73.57 E-value=20 Score=30.82 Aligned_cols=102 Identities=15% Similarity=0.087 Sum_probs=56.4
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEe
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFL 311 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~ 311 (503)
.+++.+.-.+.-.|+|+|.+.| .+...|+.+. . ++|||+.+...++.+.++ .-..+|.
T Consensus 8 ~~~~~~~~~~~~~vLDiG~G~G--------~~~~~l~~~~-----~-~v~~vD~s~~~~~~a~~~--------~~~v~~~ 65 (170)
T 3i9f_A 8 EYLPNIFEGKKGVIVDYGCGNG--------FYCKYLLEFA-----T-KLYCIDINVIALKEVKEK--------FDSVITL 65 (170)
T ss_dssp TTHHHHHSSCCEEEEEETCTTC--------TTHHHHHTTE-----E-EEEEECSCHHHHHHHHHH--------CTTSEEE
T ss_pred HHHHhcCcCCCCeEEEECCCCC--------HHHHHHHhhc-----C-eEEEEeCCHHHHHHHHHh--------CCCcEEE
Confidence 3455555566778999997543 2445555542 3 899999887666665554 1123332
Q ss_pred eecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 312 AVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 312 ~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
.- + +...++..=+|-+...+||+.+ ...+|+.+ +.|+|.-.+++
T Consensus 66 ~~--d--------~~~~~~~~D~v~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 66 SD--P--------KEIPDNSVDFILFANSFHDMDD-----KQHVISEVKRILKDDGRVII 110 (170)
T ss_dssp SS--G--------GGSCTTCEEEEEEESCSTTCSC-----HHHHHHHHHHHEEEEEEEEE
T ss_pred eC--C--------CCCCCCceEEEEEccchhcccC-----HHHHHHHHHHhcCCCCEEEE
Confidence 21 1 2223333333445556688743 23555554 67899644443
No 77
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=73.18 E-value=32 Score=31.57 Aligned_cols=119 Identities=16% Similarity=0.174 Sum_probs=63.1
Q ss_pred hhHHHHhhhcCC-----ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhh
Q 037028 229 ANASILEAFEGE-----SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADG 303 (503)
Q Consensus 229 ANqAILEA~~g~-----~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~ 303 (503)
....+++.+... +.-.|+|+|.+.| .+...|+.+. ..++|+|+.+...++.+.+++...-
T Consensus 62 ~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G--------~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~-- 126 (241)
T 2ex4_A 62 SSRKFLQRFLREGPNKTGTSCALDCGAGIG--------RITKRLLLPL-----FREVDMVDITEDFLVQAKTYLGEEG-- 126 (241)
T ss_dssp HHHHHHHGGGC----CCCCSEEEEETCTTT--------HHHHHTTTTT-----CSEEEEEESCHHHHHHHHHHTGGGG--
T ss_pred hHHHHHHHHHHhcccCCCCCEEEEECCCCC--------HHHHHHHHhc-----CCEEEEEeCCHHHHHHHHHHhhhcC--
Confidence 344555554332 3568999996533 2344555542 2489999988777766665543321
Q ss_pred CCCcEEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEE-Eeec
Q 037028 304 LKLNFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVML-VEQD 373 (503)
Q Consensus 304 lgipFeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvl-vE~e 373 (503)
+...+|.. .+++++.. .++..=+|-|...|||+.+. ....+|+.+ +.|+|.-+++ ++..
T Consensus 127 -~~~~~~~~--~d~~~~~~-----~~~~fD~v~~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 127 -KRVRNYFC--CGLQDFTP-----EPDSYDVIWIQWVIGHLTDQ---HLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp -GGEEEEEE--CCGGGCCC-----CSSCEEEEEEESCGGGSCHH---HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -CceEEEEE--cChhhcCC-----CCCCEEEEEEcchhhhCCHH---HHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 22344432 23443332 22322233344567887652 234566655 5689975444 4543
No 78
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=72.57 E-value=14 Score=31.75 Aligned_cols=102 Identities=10% Similarity=0.114 Sum_probs=55.8
Q ss_pred HHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC-cEEEe
Q 037028 233 ILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL-NFEFL 311 (503)
Q Consensus 233 ILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi-pFeF~ 311 (503)
|++.+.-.+.-+|+|+|.+.| . +...|+. + ..++|||+.+...++.+.+++ +..|+ ..+|.
T Consensus 27 ~~~~~~~~~~~~vLdiG~G~G----~----~~~~l~~-----~-~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~~~~ 88 (183)
T 2yxd_A 27 SIGKLNLNKDDVVVDVGCGSG----G----MTVEIAK-----R-CKFVYAIDYLDGAIEVTKQNL----AKFNIKNCQII 88 (183)
T ss_dssp HHHHHCCCTTCEEEEESCCCS----H----HHHHHHT-----T-SSEEEEEECSHHHHHHHHHHH----HHTTCCSEEEE
T ss_pred HHHHcCCCCCCEEEEeCCCCC----H----HHHHHHh-----c-CCeEEEEeCCHHHHHHHHHHH----HHcCCCcEEEE
Confidence 344444344558999997533 2 3344554 2 479999998877776666554 34454 34443
Q ss_pred eecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEE
Q 037028 312 AVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLV 370 (503)
Q Consensus 312 ~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~Pkvvvlv 370 (503)
. .++.+.-++ ..=+.++.+.. .....+|+.++++ |.-.+++
T Consensus 89 ~--~d~~~~~~~----~~~D~i~~~~~-----------~~~~~~l~~~~~~-~gG~l~~ 129 (183)
T 2yxd_A 89 K--GRAEDVLDK----LEFNKAFIGGT-----------KNIEKIIEILDKK-KINHIVA 129 (183)
T ss_dssp E--SCHHHHGGG----CCCSEEEECSC-----------SCHHHHHHHHHHT-TCCEEEE
T ss_pred E--CCccccccC----CCCcEEEECCc-----------ccHHHHHHHHhhC-CCCEEEE
Confidence 2 233221111 12244544433 1235788888888 8644444
No 79
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=72.16 E-value=30 Score=29.91 Aligned_cols=114 Identities=11% Similarity=0.070 Sum_probs=62.5
Q ss_pred hhHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc-
Q 037028 229 ANASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN- 307 (503)
Q Consensus 229 ANqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip- 307 (503)
..+.+++.+.-...-+|+|+|.+. | .+...++.+ + .++|+|+.+...++.+.+++ +..|++
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~----G----~~~~~~~~~-~-----~~v~~~D~~~~~~~~a~~~~----~~~~~~~ 101 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGY----G----VIGIALADE-V-----KSTTMADINRRAIKLAKENI----KLNNLDN 101 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTT----S----HHHHHHGGG-S-----SEEEEEESCHHHHHHHHHHH----HHTTCTT
T ss_pred HHHHHHHHcccCCCCeEEEeCCCC----C----HHHHHHHHc-C-----CeEEEEECCHHHHHHHHHHH----HHcCCCc
Confidence 345566666655667899999653 3 334456655 2 48999998877776665554 344554
Q ss_pred --EEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEee
Q 037028 308 --FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVEQ 372 (503)
Q Consensus 308 --FeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE~ 372 (503)
++|... ++.+..+ -..=+.|+.|.. +|+-. .....+|+.+ +.|+|.-.+++..
T Consensus 102 ~~~~~~~~--d~~~~~~----~~~~D~v~~~~~--~~~~~----~~~~~~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 102 YDIRVVHS--DLYENVK----DRKYNKIITNPP--IRAGK----EVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp SCEEEEEC--STTTTCT----TSCEEEEEECCC--STTCH----HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cceEEEEC--chhcccc----cCCceEEEECCC--cccch----hHHHHHHHHHHHHcCCCCEEEEEE
Confidence 555432 2222111 011145555544 34311 1234555555 5689976555543
No 80
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=72.00 E-value=41 Score=30.88 Aligned_cols=111 Identities=19% Similarity=0.276 Sum_probs=59.9
Q ss_pred HHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEee
Q 037028 233 ILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLA 312 (503)
Q Consensus 233 ILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~ 312 (503)
+++.......-+|+|+|.|. | .+...|+.+ | .++|||+.+...++.+.+++. ..|+.++|..
T Consensus 33 ~~~~~~~~~~~~vLDlGcG~----G----~~~~~l~~~-~-----~~v~gvD~s~~~l~~a~~~~~----~~~~~v~~~~ 94 (252)
T 1wzn_A 33 IFKEDAKREVRRVLDLACGT----G----IPTLELAER-G-----YEVVGLDLHEEMLRVARRKAK----ERNLKIEFLQ 94 (252)
T ss_dssp HHHHTCSSCCCEEEEETCTT----C----HHHHHHHHT-T-----CEEEEEESCHHHHHHHHHHHH----HTTCCCEEEE
T ss_pred HHHHhcccCCCEEEEeCCCC----C----HHHHHHHHC-C-----CeEEEEECCHHHHHHHHHHHH----hcCCceEEEE
Confidence 34444334456899999753 3 234455554 2 489999998877777666653 3455555543
Q ss_pred ecccccccCcccccccCCcEEEEEecc-ccccccccccchHHHHHHHH-HhcCCcEEEEEee
Q 037028 313 VEKSLETLQAKDINVEDGEVLVMNSIL-ELHCVVKESRGALNSVLQRL-HQLSPKVVMLVEQ 372 (503)
Q Consensus 313 v~~~le~l~~~~l~~~~~EaLaVN~~~-~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE~ 372 (503)
.++.++.. . +..=+|-|.+ .+|++.. .....+|+.+ +.|+|.-+++++-
T Consensus 95 --~d~~~~~~-----~-~~fD~v~~~~~~~~~~~~---~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 95 --GDVLEIAF-----K-NEFDAVTMFFSTIMYFDE---EDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp --SCGGGCCC-----C-SCEEEEEECSSGGGGSCH---HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CChhhccc-----C-CCccEEEEcCCchhcCCH---HHHHHHHHHHHHHcCCCeEEEEec
Confidence 23333321 1 2221222322 2333321 2345666665 5689987777654
No 81
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=71.67 E-value=9.5 Score=37.93 Aligned_cols=118 Identities=13% Similarity=0.172 Sum_probs=64.8
Q ss_pred hhHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcE
Q 037028 229 ANASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNF 308 (503)
Q Consensus 229 ANqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipF 308 (503)
..+.|++.+.....-+|+|+|.|.| .+...|+.+ + | ..++|+|+.+...++.+.+++. ..|+..
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G--------~~~~~la~~--~-~-~~~v~~vD~s~~~l~~a~~~~~----~~~~~~ 247 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAG--------VLSVAFARH--S-P-KIRLTLCDVSAPAVEASRATLA----ANGVEG 247 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTS--------HHHHHHHHH--C-T-TCBCEEEESBHHHHHHHHHHHH----HTTCCC
T ss_pred HHHHHHHhcCcCCCCeEEEecCccC--------HHHHHHHHH--C-C-CCEEEEEECCHHHHHHHHHHHH----HhCCCC
Confidence 3577888875433447999996533 233445544 2 3 4699999988777776666653 356655
Q ss_pred EEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 309 eF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
+|. ..+..+... ..=+.|+.|..| |+...........+|+.+ +-|+|.-.+++.
T Consensus 248 ~~~--~~d~~~~~~-----~~fD~Iv~~~~~--~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 248 EVF--ASNVFSEVK-----GRFDMIISNPPF--HDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp EEE--ECSTTTTCC-----SCEEEEEECCCC--CSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEE--Ecccccccc-----CCeeEEEECCCc--ccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 552 222211110 111456666554 543221122345666666 568997555543
No 82
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=69.47 E-value=22 Score=35.09 Aligned_cols=98 Identities=16% Similarity=0.281 Sum_probs=51.7
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeeccccccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETL 320 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l 320 (503)
+.-+|+|+|-+ .| .+...|+.+- | .+++|+++. ...++ .|+... ..+|..- ++.+
T Consensus 188 ~~~~vlDvG~G----~G----~~~~~l~~~~---p-~~~~~~~D~-~~~~~--------~a~~~~-~v~~~~~--d~~~- 242 (352)
T 1fp2_A 188 GLESIVDVGGG----TG----TTAKIICETF---P-KLKCIVFDR-PQVVE--------NLSGSN-NLTYVGG--DMFT- 242 (352)
T ss_dssp TCSEEEEETCT----TS----HHHHHHHHHC---T-TCEEEEEEC-HHHHT--------TCCCBT-TEEEEEC--CTTT-
T ss_pred cCceEEEeCCC----cc----HHHHHHHHHC---C-CCeEEEeeC-HHHHh--------hcccCC-CcEEEec--cccC-
Confidence 44689999964 34 3455566543 3 479999997 33332 233321 1444432 2211
Q ss_pred CcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCC---c-EEEEEeec
Q 037028 321 QAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSP---K-VVMLVEQD 373 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~P---k-vvvlvE~e 373 (503)
+ +. .-++++ +...|||+.++ ....+|+.+ +.|+| . .++++|..
T Consensus 243 -~--~p--~~D~v~--~~~~lh~~~d~---~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 243 -S--IP--NADAVL--LKYILHNWTDK---DCLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp -C--CC--CCSEEE--EESCGGGSCHH---HHHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred -C--CC--CccEEE--eehhhccCCHH---HHHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 1 11 123444 44556887653 223566666 55788 4 56666654
No 83
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=67.93 E-value=14 Score=34.42 Aligned_cols=98 Identities=12% Similarity=0.222 Sum_probs=56.6
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccC
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQ 321 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~ 321 (503)
.-.|+|+|.|.| .+...|+.+ + .++|||+.+...++.+.+++. + .+|. ..+++++.
T Consensus 51 ~~~vLDiGcG~G--------~~~~~l~~~--~----~~v~gvD~s~~~~~~a~~~~~------~--~~~~--~~d~~~~~ 106 (263)
T 3pfg_A 51 AASLLDVACGTG--------MHLRHLADS--F----GTVEGLELSADMLAIARRRNP------D--AVLH--HGDMRDFS 106 (263)
T ss_dssp CCEEEEETCTTS--------HHHHHHTTT--S----SEEEEEESCHHHHHHHHHHCT------T--SEEE--ECCTTTCC
T ss_pred CCcEEEeCCcCC--------HHHHHHHHc--C----CeEEEEECCHHHHHHHHhhCC------C--CEEE--ECChHHCC
Confidence 357999997533 345566655 2 279999988766666555432 2 3333 22333332
Q ss_pred cccccccCCcEEEEEecc-ccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 322 AKDINVEDGEVLVMNSIL-ELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 322 ~~~l~~~~~EaLaVN~~~-~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
. ++..=+|-|.+ .|||+.+. .....+|+.+ +.|+|.-+++++
T Consensus 107 ~------~~~fD~v~~~~~~l~~~~~~--~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 107 L------GRRFSAVTCMFSSIGHLAGQ--AELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp C------SCCEEEEEECTTGGGGSCHH--HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred c------cCCcCEEEEcCchhhhcCCH--HHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 33333444555 77888642 2244566665 568998777775
No 84
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=66.99 E-value=28 Score=34.59 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=61.8
Q ss_pred hHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--
Q 037028 230 NASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN-- 307 (503)
Q Consensus 230 NqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip-- 307 (503)
.++|++.+...+.-+|+|+|.|.| .|...++.+ + .-++|||+.+. .++.+.+ .++..|+.
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG--------~ls~~la~~-g----~~~V~~vD~s~-~~~~a~~----~~~~~~l~~~ 100 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSG--------ILSFFAAQA-G----ARKIYAVEAST-MAQHAEV----LVKSNNLTDR 100 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTS--------HHHHHHHHT-T----CSEEEEEECST-HHHHHHH----HHHHTTCTTT
T ss_pred HHHHHhccccCCcCEEEEcCCCcc--------HHHHHHHhC-C----CCEEEEECCHH-HHHHHHH----HHHHcCCCCc
Confidence 367777776556669999996432 355556654 1 25999999873 4433322 33444543
Q ss_pred EEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEe
Q 037028 308 FEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLVE 371 (503)
Q Consensus 308 FeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~PkvvvlvE 371 (503)
.+| +..+++++... ..=+.|+.+.+ ++|+..+. ..+.+...-+-|+|.-+++..
T Consensus 101 v~~--~~~d~~~~~~~----~~~D~Ivs~~~--~~~~~~~~--~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 101 IVV--IPGKVEEVSLP----EQVDIIISEPM--GYMLFNER--MLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEE--EESCTTTCCCS----SCEEEEEECCC--BTTBTTTS--HHHHHHHGGGGEEEEEEEESC
T ss_pred EEE--EEcchhhCCCC----CceeEEEEeCc--hhcCChHH--HHHHHHHHHhhcCCCeEEEEe
Confidence 444 33344444211 11133443333 46665432 234555556778998777643
No 85
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=66.56 E-value=49 Score=30.01 Aligned_cols=110 Identities=13% Similarity=0.137 Sum_probs=56.2
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--EEEeeec--ccc
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--FEFLAVE--KSL 317 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--FeF~~v~--~~l 317 (503)
.-+|+|+|.+.| .. ...|+..- +| .-++|+|+.+...++.+.+++. ..|+. ++|..-. ..+
T Consensus 59 ~~~vLdiG~G~G------~~--~~~la~~~--~~-~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~v~~~~~d~~~~l 123 (221)
T 3u81_A 59 PSLVLELGAYCG------YS--AVRMARLL--QP-GARLLTMEINPDCAAITQQMLN----FAGLQDKVTILNGASQDLI 123 (221)
T ss_dssp CSEEEEECCTTS------HH--HHHHHTTS--CT-TCEEEEEESCHHHHHHHHHHHH----HHTCGGGEEEEESCHHHHG
T ss_pred CCEEEEECCCCC------HH--HHHHHHhC--CC-CCEEEEEeCChHHHHHHHHHHH----HcCCCCceEEEECCHHHHH
Confidence 347999996533 22 22244321 23 4799999988777766665554 34543 5554321 112
Q ss_pred cccCcccccccCCcEEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEeecC
Q 037028 318 ETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLVEQDS 374 (503)
Q Consensus 318 e~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~PkvvvlvE~ea 374 (503)
..+.. ......=+.|+++... |+.. ....++..++-|+|.-+++++.-.
T Consensus 124 ~~~~~-~~~~~~fD~V~~d~~~--~~~~-----~~~~~~~~~~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 124 PQLKK-KYDVDTLDMVFLDHWK--DRYL-----PDTLLLEKCGLLRKGTVLLADNVI 172 (221)
T ss_dssp GGTTT-TSCCCCCSEEEECSCG--GGHH-----HHHHHHHHTTCCCTTCEEEESCCC
T ss_pred HHHHH-hcCCCceEEEEEcCCc--ccch-----HHHHHHHhccccCCCeEEEEeCCC
Confidence 22211 0001122455554322 3221 122466666889999888776433
No 86
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=65.93 E-value=76 Score=28.54 Aligned_cols=22 Identities=18% Similarity=0.318 Sum_probs=18.2
Q ss_pred ccchhhHHHHHhcCCceeecCC
Q 037028 437 HERVDQWRRRMSRAGFQSVPIK 458 (503)
Q Consensus 437 hE~~~~Wr~rm~~aGF~~~~ls 458 (503)
.-..+.|+..++++||+.+.+.
T Consensus 165 ~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 165 FFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEE
T ss_pred cCCHHHHHHHHHHCCCeEEEEe
Confidence 3467889999999999988764
No 87
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=64.59 E-value=15 Score=35.75 Aligned_cols=53 Identities=13% Similarity=0.106 Sum_probs=35.4
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHH
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDEL 297 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL 297 (503)
..|++.+.-...-+|+|+|.| .| .+-..|+.+ + -++|||+.+...++.+.+++
T Consensus 35 ~~il~~l~l~~g~~VLDlGcG----tG----~~a~~La~~-g-----~~V~gvD~S~~ml~~Ar~~~ 87 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGAS----TR----FLIEKALER-G-----ASVTVFDFSQRMCDDLAEAL 87 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTT----CH----HHHHHHHHT-T-----CEEEEEESCHHHHHHHHHHT
T ss_pred HHHHHhcCCCCcCEEEEEeCc----ch----HHHHHHHhc-C-----CEEEEEECCHHHHHHHHHHH
Confidence 446666655556689999964 23 245566665 2 37999998877776666554
No 88
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=64.33 E-value=38 Score=29.92 Aligned_cols=102 Identities=14% Similarity=0.172 Sum_probs=53.7
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccC
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQ 321 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~ 321 (503)
.-+|+|+|.+. |.-. +..++. ++ .++|||+.+...++.+.+++.+ .+..++|.. .+++++.
T Consensus 24 ~~~vLDiGcG~----G~~~---~~~~~~-~~-----~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~--~d~~~~~ 84 (209)
T 2p8j_A 24 DKTVLDCGAGG----DLPP---LSIFVE-DG-----YKTYGIEISDLQLKKAENFSRE----NNFKLNISK--GDIRKLP 84 (209)
T ss_dssp CSEEEEESCCS----SSCT---HHHHHH-TT-----CEEEEEECCHHHHHHHHHHHHH----HTCCCCEEE--CCTTSCC
T ss_pred CCEEEEECCCC----CHHH---HHHHHh-CC-----CEEEEEECCHHHHHHHHHHHHh----cCCceEEEE--CchhhCC
Confidence 34799999642 3221 222332 22 5899999988777776666543 233333432 2333322
Q ss_pred cccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 322 AKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 322 ~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
..++..=+|-+...+||+.. .....+|+.+ +.|+|.-++++
T Consensus 85 -----~~~~~fD~v~~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~l~~ 126 (209)
T 2p8j_A 85 -----FKDESMSFVYSYGTIFHMRK---NDVKEAIDEIKRVLKPGGLACI 126 (209)
T ss_dssp -----SCTTCEEEEEECSCGGGSCH---HHHHHHHHHHHHHEEEEEEEEE
T ss_pred -----CCCCceeEEEEcChHHhCCH---HHHHHHHHHHHHHcCCCcEEEE
Confidence 22332223334456788742 2234556555 67899755544
No 89
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=64.12 E-value=46 Score=30.09 Aligned_cols=109 Identities=16% Similarity=0.212 Sum_probs=58.1
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEE
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEF 310 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF 310 (503)
..|++.+.....-+|+|+|.+. | .+...|+.+ + + -++|||+.+...++.+.+++.. . .++|
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~----G----~~~~~l~~~--~-~--~~v~~vD~s~~~~~~a~~~~~~----~--~~~~ 93 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGF----G----WFCRWAHEH--G-A--SYVLGLDLSEKMLARARAAGPD----T--GITY 93 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTT----C----HHHHHHHHT--T-C--SEEEEEESCHHHHHHHHHTSCS----S--SEEE
T ss_pred HHHHHhccccCCCEEEEEcCcC----C----HHHHHHHHC--C-C--CeEEEEcCCHHHHHHHHHhccc----C--CceE
Confidence 4566666655566899999653 3 234455655 1 1 2899999886666555443311 1 2344
Q ss_pred eeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 311 LAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 311 ~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
.. .+++++. ..++..=+|-+...|||+.+ ...+|+.+ +.|+|.-.+++
T Consensus 94 ~~--~d~~~~~-----~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 94 ER--ADLDKLH-----LPQDSFDLAYSSLALHYVED-----VARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp EE--CCGGGCC-----CCTTCEEEEEEESCGGGCSC-----HHHHHHHHHHHEEEEEEEEE
T ss_pred EE--cChhhcc-----CCCCCceEEEEeccccccch-----HHHHHHHHHHhcCcCcEEEE
Confidence 32 2333322 22232223334456788742 24555555 56899754444
No 90
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=63.94 E-value=23 Score=32.86 Aligned_cols=115 Identities=12% Similarity=0.104 Sum_probs=59.9
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc-EEEeeecccccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN-FEFLAVEKSLET 319 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip-FeF~~v~~~le~ 319 (503)
+.-.|+|+|.|. | .+...||.+. | ..+++||+.+...++.+.+++ +..|++ ++|. ..+..+
T Consensus 34 ~~~~vLDiGcG~----G----~~~~~lA~~~---p-~~~v~giD~s~~~l~~a~~~~----~~~~l~nv~~~--~~Da~~ 95 (218)
T 3dxy_A 34 EAPVTLEIGFGM----G----ASLVAMAKDR---P-EQDFLGIEVHSPGVGACLASA----HEEGLSNLRVM--CHDAVE 95 (218)
T ss_dssp CCCEEEEESCTT----C----HHHHHHHHHC---T-TSEEEEECSCHHHHHHHHHHH----HHTTCSSEEEE--CSCHHH
T ss_pred CCCeEEEEeeeC----h----HHHHHHHHHC---C-CCeEEEEEecHHHHHHHHHHH----HHhCCCcEEEE--ECCHHH
Confidence 445799999643 3 2344455542 3 479999998877776665543 445553 5553 233333
Q ss_pred cCcccccccCCcEEEEEecccccccccccc-chHHHHHHHH-HhcCCcEEEEEeec
Q 037028 320 LQAKDINVEDGEVLVMNSILELHCVVKESR-GALNSVLQRL-HQLSPKVVMLVEQD 373 (503)
Q Consensus 320 l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~-~~~~~~L~~I-r~L~PkvvvlvE~e 373 (503)
+-+..+.-..=+.|.+|+....++.....+ -....+|+.+ +.|+|.-++++.-|
T Consensus 96 ~l~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 96 VLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp HHHHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 211111111113566664443333221110 0013577777 55999877776654
No 91
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=63.52 E-value=36 Score=29.99 Aligned_cols=108 Identities=15% Similarity=0.178 Sum_probs=54.4
Q ss_pred eEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC--cEEEeeeccccccc
Q 037028 243 VHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL--NFEFLAVEKSLETL 320 (503)
Q Consensus 243 VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi--pFeF~~v~~~le~l 320 (503)
-.|+|+|.| .| .+...|+.+-+ | .-++|||+.+...++.+.+++ +..|+ .++|. ..+.+++
T Consensus 24 ~~vLDlGcG----~G----~~~~~l~~~~~--~-~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~v~~~--~~d~~~~ 86 (197)
T 3eey_A 24 DTVVDATCG----NG----NDTAFLASLVG--E-NGRVFGFDIQDKAIANTTKKL----TDLNLIDRVTLI--KDGHQNM 86 (197)
T ss_dssp CEEEESCCT----TS----HHHHHHHHHHC--T-TCEEEEECSCHHHHHHHHHHH----HHTTCGGGEEEE--CSCGGGG
T ss_pred CEEEEcCCC----CC----HHHHHHHHHhC--C-CCEEEEEECCHHHHHHHHHHH----HHcCCCCCeEEE--ECCHHHH
Confidence 379999964 33 23334554421 2 249999998877777766665 34455 35553 3344333
Q ss_pred CcccccccCCcEEEEEeccc---cccccccccchHHHHHHH-HHhcCCcEEEEE
Q 037028 321 QAKDINVEDGEVLVMNSILE---LHCVVKESRGALNSVLQR-LHQLSPKVVMLV 370 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~---Lh~l~~es~~~~~~~L~~-Ir~L~Pkvvvlv 370 (503)
... +. ..=+.++.|..+. -|+..... .....+|+. .+-|+|.-.+++
T Consensus 87 ~~~-~~-~~fD~v~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 87 DKY-ID-CPVKAVMFNLGYLPSGDHSISTRP-ETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp GGT-CC-SCEEEEEEEESBCTTSCTTCBCCH-HHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhh-cc-CCceEEEEcCCcccCcccccccCc-ccHHHHHHHHHHhCcCCCEEEE
Confidence 210 00 1224666666541 11121111 112234444 466899754443
No 92
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=62.85 E-value=35 Score=29.54 Aligned_cols=107 Identities=19% Similarity=0.158 Sum_probs=58.3
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--EEEeeecccccc
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--FEFLAVEKSLET 319 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--FeF~~v~~~le~ 319 (503)
.-.|+|+|.|.| .+...|+.++ .-++|||+.+...++.+.+++ +..|++ .+|. ..++.+
T Consensus 32 ~~~vLDlGcG~G--------~~~~~l~~~~-----~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~~~~~--~~d~~~ 92 (177)
T 2esr_A 32 GGRVLDLFAGSG--------GLAIEAVSRG-----MSAAVLVEKNRKAQAIIQDNI----IMTKAENRFTLL--KMEAER 92 (177)
T ss_dssp SCEEEEETCTTC--------HHHHHHHHTT-----CCEEEEECCCHHHHHHHHHHH----HTTTCGGGEEEE--CSCHHH
T ss_pred CCeEEEeCCCCC--------HHHHHHHHcC-----CCEEEEEECCHHHHHHHHHHH----HHcCCCCceEEE--ECcHHH
Confidence 347999997543 2333455551 268999998877776665554 455664 5553 233332
Q ss_pred cCcccccccCCcEEEEEeccccccccccccchHHHHHHHH---HhcCCcEEEEEeecCCCC
Q 037028 320 LQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL---HQLSPKVVMLVEQDSSHN 377 (503)
Q Consensus 320 l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I---r~L~PkvvvlvE~ea~~n 377 (503)
..+. +. ..=+.++.|..+ |. .....+++.+ +-|+|.-+++++......
T Consensus 93 ~~~~-~~-~~fD~i~~~~~~--~~------~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 93 AIDC-LT-GRFDLVFLDPPY--AK------ETIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp HHHH-BC-SCEEEEEECCSS--HH------HHHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred hHHh-hc-CCCCEEEECCCC--Cc------chHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 1110 00 111456666554 21 1123455555 678999777776655433
No 93
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=60.76 E-value=29 Score=34.30 Aligned_cols=107 Identities=20% Similarity=0.258 Sum_probs=56.1
Q ss_pred HHHhhh--cCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEE
Q 037028 232 SILEAF--EGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFE 309 (503)
Q Consensus 232 AILEA~--~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFe 309 (503)
.|++.+ .-...-+|+|+|-+ .| .+...|+.+- | .+++|+++.+ ..+ +.|+.+. .++
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G----~G----~~~~~l~~~~---p-~~~~~~~D~~-~~~--------~~a~~~~-~v~ 239 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGG----TG----GVTKLIHEIF---P-HLKCTVFDQP-QVV--------GNLTGNE-NLN 239 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCT----TS----HHHHHHHHHC---T-TSEEEEEECH-HHH--------SSCCCCS-SEE
T ss_pred HHHHhcchhccCCCEEEEECCC----cC----HHHHHHHHHC---C-CCeEEEeccH-HHH--------hhcccCC-CcE
Confidence 566666 11234589999964 33 3455566553 3 5899999863 222 2233221 144
Q ss_pred EeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCC---c-EEEEEeec
Q 037028 310 FLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSP---K-VVMLVEQD 373 (503)
Q Consensus 310 F~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~P---k-vvvlvE~e 373 (503)
|..- ++.+ + +. .-++++.+ ..||++.++ ....+|+.+ +.|+| . .++++|.-
T Consensus 240 ~~~~--d~~~--~--~~--~~D~v~~~--~vlh~~~d~---~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 240 FVGG--DMFK--S--IP--SADAVLLK--WVLHDWNDE---QSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp EEEC--CTTT--C--CC--CCSEEEEE--SCGGGSCHH---HHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred EEeC--ccCC--C--CC--CceEEEEc--ccccCCCHH---HHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 4332 2221 1 11 23455544 456887653 223666666 56888 4 45666654
No 94
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=59.69 E-value=85 Score=27.79 Aligned_cols=56 Identities=21% Similarity=0.227 Sum_probs=36.0
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHH
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKR 299 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~ 299 (503)
.+++.+.-...-.|+|+|.|. |. +...|+.+ + | ..++|+|+.+...++.+.+++.+
T Consensus 31 ~~l~~l~~~~~~~vLDiG~G~----G~----~~~~la~~--~-~-~~~v~~vD~s~~~~~~a~~~~~~ 86 (204)
T 3e05_A 31 VTLSKLRLQDDLVMWDIGAGS----AS----VSIEASNL--M-P-NGRIFALERNPQYLGFIRDNLKK 86 (204)
T ss_dssp HHHHHTTCCTTCEEEEETCTT----CH----HHHHHHHH--C-T-TSEEEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCC----CH----HHHHHHHH--C-C-CCEEEEEeCCHHHHHHHHHHHHH
Confidence 355555555566899999643 32 33445554 2 2 47999999988777777666543
No 95
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=59.45 E-value=44 Score=29.90 Aligned_cols=19 Identities=26% Similarity=0.490 Sum_probs=15.2
Q ss_pred chhhHHHHHhcCCceeecC
Q 037028 439 RVDQWRRRMSRAGFQSVPI 457 (503)
Q Consensus 439 ~~~~Wr~rm~~aGF~~~~l 457 (503)
..+.|...+..+||+.+..
T Consensus 158 ~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 158 DVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp CHHHHHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEE
Confidence 5568888899999988664
No 96
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=59.45 E-value=69 Score=28.96 Aligned_cols=62 Identities=18% Similarity=0.173 Sum_probs=39.4
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--EE
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--FE 309 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--Fe 309 (503)
.+++.+.-...-.|+|+|.+. | .+...|+.+ + -++|||+.+...++.+.++ ++..|++ ++
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~----G----~~~~~la~~-~-----~~v~~vD~s~~~~~~a~~~----~~~~g~~~~v~ 107 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGS----G----SVSVEWCLA-G-----GRAITIEPRADRIENIQKN----IDTYGLSPRMR 107 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTT----C----HHHHHHHHT-T-----CEEEEEESCHHHHHHHHHH----HHHTTCTTTEE
T ss_pred HHHHhcCCCCCCEEEEecCCC----C----HHHHHHHHc-C-----CEEEEEeCCHHHHHHHHHH----HHHcCCCCCEE
Confidence 355555545556799999643 2 234456665 2 5899999887777666555 4556765 66
Q ss_pred Ee
Q 037028 310 FL 311 (503)
Q Consensus 310 F~ 311 (503)
|.
T Consensus 108 ~~ 109 (204)
T 3njr_A 108 AV 109 (204)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 97
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=59.42 E-value=37 Score=30.14 Aligned_cols=55 Identities=29% Similarity=0.427 Sum_probs=36.8
Q ss_pred hhhHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHH
Q 037028 228 VANASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDE 296 (503)
Q Consensus 228 tANqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~r 296 (503)
...+.|++.+.....-+|+|+|.+. | .+...|+.+ + .++|||+.+...++.+.++
T Consensus 39 ~~~~~~~~~~~~~~~~~vLdiG~G~----G----~~~~~l~~~-~-----~~v~~vD~s~~~~~~a~~~ 93 (227)
T 3e8s_A 39 VTDQAILLAILGRQPERVLDLGCGE----G----WLLRALADR-G-----IEAVGVDGDRTLVDAARAA 93 (227)
T ss_dssp THHHHHHHHHHHTCCSEEEEETCTT----C----HHHHHHHTT-T-----CEEEEEESCHHHHHHHHHT
T ss_pred cccHHHHHHhhcCCCCEEEEeCCCC----C----HHHHHHHHC-C-----CEEEEEcCCHHHHHHHHHh
Confidence 3556777777766668999999653 3 345666665 2 4899999886555544443
No 98
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=58.83 E-value=22 Score=34.69 Aligned_cols=101 Identities=20% Similarity=0.292 Sum_probs=59.7
Q ss_pred HHhccchhhhh-HhhhHH----HHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhH
Q 037028 216 YEICPQIQFGH-FVANAS----ILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERL 290 (503)
Q Consensus 216 ~e~~P~~kfah-ftANqA----ILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l 290 (503)
|.+.|=-++++ |..|+. |++++.-... +|+|+|-|.| .|-..|+.+. -++|||+.+.+.+
T Consensus 17 ~~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G--------~lt~~L~~~~------~~V~avEid~~~~ 81 (271)
T 3fut_A 17 HGLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLG--------ALTRALLEAG------AEVTAIEKDLRLR 81 (271)
T ss_dssp TTCCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTS--------HHHHHHHHTT------CCEEEEESCGGGH
T ss_pred cCCCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchH--------HHHHHHHHcC------CEEEEEECCHHHH
Confidence 44556666664 554544 5555555556 9999996533 4677788762 3699999887777
Q ss_pred HHHHHHHHHHHhhCCCcEEEeeecccccccCcccccccCCcEEEEEecccc
Q 037028 291 GEIGDELKRYADGLKLNFEFLAVEKSLETLQAKDINVEDGEVLVMNSILEL 341 (503)
Q Consensus 291 ~~tg~rL~~fA~~lgipFeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~L 341 (503)
+...+++. +-.+++ +..+..+++...+ .....|+-|..+..
T Consensus 82 ~~l~~~~~------~~~v~v--i~~D~l~~~~~~~--~~~~~iv~NlPy~i 122 (271)
T 3fut_A 82 PVLEETLS------GLPVRL--VFQDALLYPWEEV--PQGSLLVANLPYHI 122 (271)
T ss_dssp HHHHHHTT------TSSEEE--EESCGGGSCGGGS--CTTEEEEEEECSSC
T ss_pred HHHHHhcC------CCCEEE--EECChhhCChhhc--cCccEEEecCcccc
Confidence 66666543 123333 4444444443322 13456777887653
No 99
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=58.79 E-value=1e+02 Score=27.77 Aligned_cols=101 Identities=16% Similarity=0.241 Sum_probs=56.0
Q ss_pred eEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccCc
Q 037028 243 VHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQA 322 (503)
Q Consensus 243 VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~~ 322 (503)
-.|+|+|.+. | .+...|+.+ .++|||+.+...++.+.+++.+ .+...+|... ++.++..
T Consensus 35 ~~vLdiG~G~----G----~~~~~l~~~-------~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~--d~~~~~~ 93 (243)
T 3d2l_A 35 KRIADIGCGT----G----TATLLLADH-------YEVTGVDLSEEMLEIAQEKAME----TNRHVDFWVQ--DMRELEL 93 (243)
T ss_dssp CEEEEESCTT----C----HHHHHHTTT-------SEEEEEESCHHHHHHHHHHHHH----TTCCCEEEEC--CGGGCCC
T ss_pred CeEEEecCCC----C----HHHHHHhhC-------CeEEEEECCHHHHHHHHHhhhh----cCCceEEEEc--ChhhcCC
Confidence 4799999653 3 234456553 4899999887777766665533 3444555432 3333321
Q ss_pred ccccccCCcEEEEEecc-ccccccccccchHHHHHHHH-HhcCCcEEEEEee
Q 037028 323 KDINVEDGEVLVMNSIL-ELHCVVKESRGALNSVLQRL-HQLSPKVVMLVEQ 372 (503)
Q Consensus 323 ~~l~~~~~EaLaVN~~~-~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE~ 372 (503)
. +..=+|-|.. .+||+.+. .....+|+.+ +.|+|.-.++++-
T Consensus 94 -----~-~~fD~v~~~~~~~~~~~~~--~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 94 -----P-EPVDAITILCDSLNYLQTE--ADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp -----S-SCEEEEEECTTGGGGCCSH--HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----C-CCcCEEEEeCCchhhcCCH--HHHHHHHHHHHHhcCCCeEEEEEc
Confidence 1 2222222333 56777432 2234566665 5689987666643
No 100
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=58.75 E-value=74 Score=27.13 Aligned_cols=60 Identities=17% Similarity=0.160 Sum_probs=38.8
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN 307 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip 307 (503)
.+++.+.-...-+|+|+|.+. | .+...|+.+. | ..++|+|+.+...++.+.+++ +..|++
T Consensus 16 ~~~~~~~~~~~~~vldiG~G~----G----~~~~~l~~~~---~-~~~v~~vD~~~~~~~~a~~~~----~~~~~~ 75 (178)
T 3hm2_A 16 LAISALAPKPHETLWDIGGGS----G----SIAIEWLRST---P-QTTAVCFEISEERRERILSNA----INLGVS 75 (178)
T ss_dssp HHHHHHCCCTTEEEEEESTTT----T----HHHHHHHTTS---S-SEEEEEECSCHHHHHHHHHHH----HTTTCT
T ss_pred HHHHHhcccCCCeEEEeCCCC----C----HHHHHHHHHC---C-CCeEEEEeCCHHHHHHHHHHH----HHhCCC
Confidence 345555555667899999643 2 3445556553 3 489999998877776666655 345655
No 101
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=58.13 E-value=13 Score=37.55 Aligned_cols=109 Identities=19% Similarity=0.229 Sum_probs=61.5
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEe
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFL 311 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~ 311 (503)
.|++.+.-...-.|+|+|-+. |. ++..|+.+ + .++|||+.+...+ +.|+..|++..-.
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~----G~----~~~~l~~~-g-----~~v~gvD~s~~~~--------~~a~~~~~~~~~~ 155 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCND----GI----MLRTIQEA-G-----VRHLGFEPSSGVA--------AKAREKGIRVRTD 155 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTT----TT----THHHHHHT-T-----CEEEEECCCHHHH--------HHHHTTTCCEECS
T ss_pred HHHHHhCCCCCCEEEEecCCC----CH----HHHHHHHc-C-----CcEEEECCCHHHH--------HHHHHcCCCccee
Confidence 455555545566899999653 33 66667764 2 3899999875444 3455556664322
Q ss_pred eecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 312 AVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 312 ~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
... .-..+.+...++..=+|-+...|||+.+ ...+|+.+ +-|+|.-+++++
T Consensus 156 ~~~----~~~~~~l~~~~~~fD~I~~~~vl~h~~d-----~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 156 FFE----KATADDVRRTEGPANVIYAANTLCHIPY-----VQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp CCS----HHHHHHHHHHHCCEEEEEEESCGGGCTT-----HHHHHHHHHHHEEEEEEEEEE
T ss_pred eec----hhhHhhcccCCCCEEEEEECChHHhcCC-----HHHHHHHHHHHcCCCeEEEEE
Confidence 111 1111112222343444555566799853 34666666 568998666664
No 102
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=57.91 E-value=68 Score=28.49 Aligned_cols=104 Identities=13% Similarity=0.059 Sum_probs=56.4
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc-EEE
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN-FEF 310 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip-FeF 310 (503)
.+++.+.-...-+|+|+|.+. |. +...|+.+ + -++|+|+.+...++.+.+++.+ .|++ .+|
T Consensus 68 ~~~~~l~~~~~~~vLdiG~G~----G~----~~~~la~~-~-----~~v~~vD~~~~~~~~a~~~~~~----~~~~~v~~ 129 (210)
T 3lbf_A 68 RMTELLELTPQSRVLEIGTGS----GY----QTAILAHL-V-----QHVCSVERIKGLQWQARRRLKN----LDLHNVST 129 (210)
T ss_dssp HHHHHTTCCTTCEEEEECCTT----SH----HHHHHHHH-S-----SEEEEEESCHHHHHHHHHHHHH----TTCCSEEE
T ss_pred HHHHhcCCCCCCEEEEEcCCC----CH----HHHHHHHh-C-----CEEEEEecCHHHHHHHHHHHHH----cCCCceEE
Confidence 345555555666899999653 32 22335544 2 4899999887777777666543 4543 444
Q ss_pred eeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEE
Q 037028 311 LAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLV 370 (503)
Q Consensus 311 ~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~Pkvvvlv 370 (503)
.. .+..+..+.. ..=+.++++ ..+|++.+ ...+.|+|.-.+++
T Consensus 130 ~~--~d~~~~~~~~---~~~D~i~~~--~~~~~~~~----------~~~~~L~pgG~lv~ 172 (210)
T 3lbf_A 130 RH--GDGWQGWQAR---APFDAIIVT--AAPPEIPT----------ALMTQLDEGGILVL 172 (210)
T ss_dssp EE--SCGGGCCGGG---CCEEEEEES--SBCSSCCT----------HHHHTEEEEEEEEE
T ss_pred EE--CCcccCCccC---CCccEEEEc--cchhhhhH----------HHHHhcccCcEEEE
Confidence 32 2222211110 111344444 34577654 24577889744444
No 103
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=57.64 E-value=31 Score=31.21 Aligned_cols=103 Identities=15% Similarity=0.172 Sum_probs=55.0
Q ss_pred eEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC-cEEEeeecccccccC
Q 037028 243 VHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL-NFEFLAVEKSLETLQ 321 (503)
Q Consensus 243 VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi-pFeF~~v~~~le~l~ 321 (503)
-+|+|+|.+.| . .+ +. ++.+ + . -+||+|+.+...++.+.+++ +..|+ ..+|. ..++.++.
T Consensus 56 ~~vLDlgcG~G----~--~~-~~-l~~~-~-~---~~V~~vD~s~~~l~~a~~~~----~~~~~~~v~~~--~~D~~~~~ 116 (202)
T 2fpo_A 56 AQCLDCFAGSG----A--LG-LE-ALSR-Y-A---AGATLIEMDRAVSQQLIKNL----ATLKAGNARVV--NSNAMSFL 116 (202)
T ss_dssp CEEEETTCTTC----H--HH-HH-HHHT-T-C---SEEEEECSCHHHHHHHHHHH----HHTTCCSEEEE--CSCHHHHH
T ss_pred CeEEEeCCCcC----H--HH-HH-HHhc-C-C---CEEEEEECCHHHHHHHHHHH----HHcCCCcEEEE--ECCHHHHH
Confidence 47999996533 2 21 22 2333 2 1 28999998877777666655 34455 34443 23333211
Q ss_pred cccccccCCcEEEEEeccccccccccccchHHHHHHHHHh---cCCcEEEEEeecC
Q 037028 322 AKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQ---LSPKVVMLVEQDS 374 (503)
Q Consensus 322 ~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~---L~PkvvvlvE~ea 374 (503)
+. .-..=+.|++|..| |. +....+++.++. |+|.-+++++...
T Consensus 117 ~~--~~~~fD~V~~~~p~--~~------~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 117 AQ--KGTPHNIVFVDPPF--RR------GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp SS--CCCCEEEEEECCSS--ST------TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred hh--cCCCCCEEEECCCC--CC------CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 11 00111456666553 21 123467777766 9998776666543
No 104
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=57.60 E-value=37 Score=33.80 Aligned_cols=104 Identities=19% Similarity=0.252 Sum_probs=57.3
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--EEEeeecccccc
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--FEFLAVEKSLET 319 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--FeF~~v~~~le~ 319 (503)
.-.|+|+|.|- | .+...|+.+ + .-+++||+.+ ..++.+.++ ++..|++ .+|. ..++++
T Consensus 67 ~~~VLDvGcG~----G----~~~~~la~~----g-~~~v~gvD~s-~~l~~a~~~----~~~~~~~~~v~~~--~~d~~~ 126 (349)
T 3q7e_A 67 DKVVLDVGSGT----G----ILCMFAAKA----G-ARKVIGIECS-SISDYAVKI----VKANKLDHVVTII--KGKVEE 126 (349)
T ss_dssp TCEEEEESCTT----S----HHHHHHHHT----T-CSEEEEEECS-THHHHHHHH----HHHTTCTTTEEEE--ESCTTT
T ss_pred CCEEEEEeccc----h----HHHHHHHHC----C-CCEEEEECcH-HHHHHHHHH----HHHcCCCCcEEEE--ECcHHH
Confidence 34699999653 3 245556665 1 3699999987 455444433 4455655 5554 334444
Q ss_pred cCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEee
Q 037028 320 LQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVEQ 372 (503)
Q Consensus 320 l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE~ 372 (503)
+... ...=++|+.|.+. +++..+ ...+.+|+.+ |-|+|.-+++.+.
T Consensus 127 ~~~~---~~~fD~Iis~~~~--~~l~~~--~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 127 VELP---VEKVDIIISEWMG--YCLFYE--SMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp CCCS---SSCEEEEEECCCB--BTBTBT--CCHHHHHHHHHHHEEEEEEEESCE
T ss_pred ccCC---CCceEEEEEcccc--ccccCc--hhHHHHHHHHHHhCCCCCEEcccc
Confidence 4211 0111344444432 333332 2356788877 7799987776443
No 105
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=57.16 E-value=64 Score=33.16 Aligned_cols=109 Identities=17% Similarity=0.210 Sum_probs=60.9
Q ss_pred HHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc-EEEe
Q 037028 233 ILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN-FEFL 311 (503)
Q Consensus 233 ILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip-FeF~ 311 (503)
+++.+.....-.|+|+|.|.| .+...||.+ .-+++||+.+.+.++.+.+++ +..|++ .+|.
T Consensus 278 ~~~~l~~~~~~~VLDlgcG~G--------~~~~~la~~------~~~V~gvD~s~~al~~A~~n~----~~~~~~~v~f~ 339 (433)
T 1uwv_A 278 ALEWLDVQPEDRVLDLFCGMG--------NFTLPLATQ------AASVVGVEGVPALVEKGQQNA----RLNGLQNVTFY 339 (433)
T ss_dssp HHHHHTCCTTCEEEEESCTTT--------TTHHHHHTT------SSEEEEEESCHHHHHHHHHHH----HHTTCCSEEEE
T ss_pred HHHhhcCCCCCEEEECCCCCC--------HHHHHHHhh------CCEEEEEeCCHHHHHHHHHHH----HHcCCCceEEE
Confidence 334443333447999996533 233446655 158999998887777766654 445653 5554
Q ss_pred eecccccccCcc-cccccCCcEEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEe
Q 037028 312 AVEKSLETLQAK-DINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLVE 371 (503)
Q Consensus 312 ~v~~~le~l~~~-~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~PkvvvlvE 371 (503)
. .++++.-+. .+.-..=++|++|-.. .....+++.+..++|+.++.+.
T Consensus 340 ~--~d~~~~l~~~~~~~~~fD~Vv~dPPr----------~g~~~~~~~l~~~~p~~ivyvs 388 (433)
T 1uwv_A 340 H--ENLEEDVTKQPWAKNGFDKVLLDPAR----------AGAAGVMQQIIKLEPIRIVYVS 388 (433)
T ss_dssp E--CCTTSCCSSSGGGTTCCSEEEECCCT----------TCCHHHHHHHHHHCCSEEEEEE
T ss_pred E--CCHHHHhhhhhhhcCCCCEEEECCCC----------ccHHHHHHHHHhcCCCeEEEEE
Confidence 3 233321111 0111122566664332 1124688888899998877763
No 106
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=57.13 E-value=42 Score=29.85 Aligned_cols=106 Identities=15% Similarity=0.218 Sum_probs=56.2
Q ss_pred hHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEE
Q 037028 230 NASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFE 309 (503)
Q Consensus 230 NqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFe 309 (503)
.+.|++.+. ...-+|+|+|.+.| .+...|+.+ + .++|+|+.+...++.+. .... +
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G--------~~~~~l~~~----~--~~~~~~D~~~~~~~~~~--------~~~~--~ 76 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSG--------ALGAAIKEN----G--TRVSGIEAFPEAAEQAK--------EKLD--H 76 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTS--------HHHHHHHTT----T--CEEEEEESSHHHHHHHH--------TTSS--E
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCC--------HHHHHHHhc----C--CeEEEEeCCHHHHHHHH--------HhCC--c
Confidence 345666665 55678999996533 344556665 2 58999998765544333 2222 2
Q ss_pred EeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 310 FLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 310 F~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
|. ..+++++. +...++..=+|-+...|||+.+ ...+|+.+ +.|+|.-.+++
T Consensus 77 ~~--~~d~~~~~---~~~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~L~~gG~l~~ 128 (230)
T 3cc8_A 77 VV--LGDIETMD---MPYEEEQFDCVIFGDVLEHLFD-----PWAVIEKVKPYIKQNGVILA 128 (230)
T ss_dssp EE--ESCTTTCC---CCSCTTCEEEEEEESCGGGSSC-----HHHHHHHTGGGEEEEEEEEE
T ss_pred EE--EcchhhcC---CCCCCCccCEEEECChhhhcCC-----HHHHHHHHHHHcCCCCEEEE
Confidence 32 22333221 1122232222334456688753 24666666 55789744444
No 107
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=56.67 E-value=19 Score=34.74 Aligned_cols=56 Identities=23% Similarity=0.334 Sum_probs=33.1
Q ss_pred HHhhhcCC--ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHH
Q 037028 233 ILEAFEGE--SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRY 300 (503)
Q Consensus 233 ILEA~~g~--~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~f 300 (503)
+++.+... ..-.|+|+|.+ .| .+...|+.+- ++ .+||||+.+...++.+.+++...
T Consensus 36 ~l~~l~~~~~~~~~VLDiGCG----~G----~~~~~la~~~--~~--~~v~gvDis~~~i~~A~~~~~~~ 93 (292)
T 3g07_A 36 RLRVLKPEWFRGRDVLDLGCN----VG----HLTLSIACKW--GP--SRMVGLDIDSRLIHSARQNIRHY 93 (292)
T ss_dssp GGGTSCGGGTTTSEEEEESCT----TC----HHHHHHHHHT--CC--SEEEEEESCHHHHHHHHHTC---
T ss_pred HHHhhhhhhcCCCcEEEeCCC----CC----HHHHHHHHHc--CC--CEEEEECCCHHHHHHHHHHHHhh
Confidence 44444333 34579999964 33 2344455543 22 59999999877777776665543
No 108
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=56.29 E-value=48 Score=32.88 Aligned_cols=111 Identities=23% Similarity=0.184 Sum_probs=58.4
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC--cE
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL--NF 308 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi--pF 308 (503)
++|++.+.-.+.-.|+|+|-|. | .|...++.+ | .-+++||+.+. .++.+.+++ +..|+ ..
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGt----G----~ls~~la~~-g----~~~v~gvD~s~-~~~~a~~~~----~~~~~~~~i 115 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGT----G----ILSMFAAKA-G----AKKVLGVDQSE-ILYQAMDII----RLNKLEDTI 115 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTT----S----HHHHHHHHT-T----CSEEEEEESST-HHHHHHHHH----HHTTCTTTE
T ss_pred HHHHhhhhhcCCCEEEEeeccC----c----HHHHHHHHc-C----CCEEEEEChHH-HHHHHHHHH----HHcCCCCcE
Confidence 4565555444455899999653 3 234455554 2 25899999873 554444433 34444 34
Q ss_pred EEeeecccccccCcccccccCCcEEEEEec-cccccccccccchHHHHHHHH-HhcCCcEEEE
Q 037028 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSI-LELHCVVKESRGALNSVLQRL-HQLSPKVVML 369 (503)
Q Consensus 309 eF~~v~~~le~l~~~~l~~~~~EaLaVN~~-~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvl 369 (503)
+| +..+++++... ...=++|+.|.+ +.|++ + ..+..+|+.+ +-|+|.-+++
T Consensus 116 ~~--~~~d~~~~~~~---~~~~D~Ivs~~~~~~l~~---~--~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 116 TL--IKGKIEEVHLP---VEKVDVIISEWMGYFLLF---E--SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EE--EESCTTTSCCS---CSCEEEEEECCCBTTBTT---T--CHHHHHHHHHHHHEEEEEEEE
T ss_pred EE--EEeeHHHhcCC---CCcEEEEEEcCchhhccC---H--HHHHHHHHHHHhhcCCCcEEE
Confidence 44 33344443211 011145555542 23332 1 2355677776 6789987666
No 109
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=55.90 E-value=50 Score=31.30 Aligned_cols=45 Identities=22% Similarity=0.102 Sum_probs=28.5
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHH
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELK 298 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~ 298 (503)
+.-.|+|+|.| .|. +..| +.+. +. -+||||+.+...++.+.+++.
T Consensus 71 ~~~~vLDiGcG----~G~-~~~l----~~~~--~~--~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 71 SGRTLIDIGSG----PTV-YQLL----SACS--HF--EDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp CCSEEEEETCT----TCC-GGGT----TGGG--GC--SEEEEECSCHHHHHHHHHHHT
T ss_pred CCCeEEEECCC----cCh-HHHH----hhcc--CC--CeEEEeCCCHHHHHHHHHHHh
Confidence 45689999974 444 3332 2221 11 489999998877777666553
No 110
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=55.05 E-value=39 Score=32.63 Aligned_cols=85 Identities=14% Similarity=0.158 Sum_probs=46.6
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC--cE
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL--NF 308 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi--pF 308 (503)
+.|++++.-...-+|+|+|-|. |. +...|+.+ + -++|||+.+...++.+.+++ +..|+ .+
T Consensus 18 ~~i~~~~~~~~~~~VLDiG~G~----G~----lt~~L~~~-~-----~~v~~vD~~~~~~~~a~~~~----~~~~~~~~v 79 (285)
T 1zq9_A 18 NSIIDKAALRPTDVVLEVGPGT----GN----MTVKLLEK-A-----KKVVACELDPRLVAELHKRV----QGTPVASKL 79 (285)
T ss_dssp HHHHHHTCCCTTCEEEEECCTT----ST----THHHHHHH-S-----SEEEEEESCHHHHHHHHHHH----TTSTTGGGE
T ss_pred HHHHHhcCCCCCCEEEEEcCcc----cH----HHHHHHhh-C-----CEEEEEECCHHHHHHHHHHH----HhcCCCCce
Confidence 3455555444556899999753 33 33445554 2 28999998876665555543 33443 34
Q ss_pred EEeeecccccccCcccccccCCcEEEEEeccc
Q 037028 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILE 340 (503)
Q Consensus 309 eF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~ 340 (503)
+|. ..+..++... .=+.|+.|..++
T Consensus 80 ~~~--~~D~~~~~~~-----~fD~vv~nlpy~ 104 (285)
T 1zq9_A 80 QVL--VGDVLKTDLP-----FFDTCVANLPYQ 104 (285)
T ss_dssp EEE--ESCTTTSCCC-----CCSEEEEECCGG
T ss_pred EEE--Ecceecccch-----hhcEEEEecCcc
Confidence 443 3333333221 124677777654
No 111
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=54.74 E-value=17 Score=34.18 Aligned_cols=112 Identities=20% Similarity=0.202 Sum_probs=57.1
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEE
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEF 310 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF 310 (503)
+.|++.+.-...-+|+|+|.+.| .| ...|+. | ..++|||+.+...++ .|+... ..+|
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G-----~~---~~~l~~-----~-~~~v~gvD~s~~~~~--------~a~~~~-~~~~ 80 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTG-----GY---SVALAN-----Q-GLFVYAVEPSIVMRQ--------QAVVHP-QVEW 80 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTS-----HH---HHHHHT-----T-TCEEEEECSCHHHHH--------SSCCCT-TEEE
T ss_pred HHHHHHhCCCCCCEEEEEcCccc-----HH---HHHHHh-----C-CCEEEEEeCCHHHHH--------HHHhcc-CCEE
Confidence 34555555455668999997533 23 344443 2 369999998753332 333332 4455
Q ss_pred eeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCc-EEEEEeecCCCCC
Q 037028 311 LAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPK-VVMLVEQDSSHNG 378 (503)
Q Consensus 311 ~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pk-vvvlvE~ea~~ns 378 (503)
.. .+++++. ..++..=+|-|...|||+.+ ...+|+.+ +.|+ . .+++++.+.....
T Consensus 81 ~~--~d~~~~~-----~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~ 137 (261)
T 3ege_A 81 FT--GYAENLA-----LPDKSVDGVISILAIHHFSH-----LEKSFQEMQRIIR-DGTIVLLTFDIRLAQ 137 (261)
T ss_dssp EC--CCTTSCC-----SCTTCBSEEEEESCGGGCSS-----HHHHHHHHHHHBC-SSCEEEEEECGGGCC
T ss_pred EE--CchhhCC-----CCCCCEeEEEEcchHhhccC-----HHHHHHHHHHHhC-CcEEEEEEcCCchhH
Confidence 32 3344332 22232223334445688743 23444444 5567 5 3666666544333
No 112
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=54.38 E-value=29 Score=36.52 Aligned_cols=114 Identities=18% Similarity=0.152 Sum_probs=61.6
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--E
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--F 308 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--F 308 (503)
++|++.+...+.-+|+|+|.|. | .+...|+.+ | ..++|||+.+. .++.+ .+.++..|+. .
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGt----G----~la~~la~~----~-~~~V~gvD~s~-~l~~A----~~~~~~~gl~~~v 209 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGS----G----ILSFFAAQA----G-ARKIYAVEAST-MAQHA----EVLVKSNNLTDRI 209 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCST----T----HHHHHHHHT----T-CSEEEEEECHH-HHHHH----HHHHHHTTCTTTE
T ss_pred HHHHHhhhhcCCCEEEEecCcc----c----HHHHHHHHc----C-CCEEEEEEcHH-HHHHH----HHHHHHcCCCCcE
Confidence 4666766555556999999643 2 244456654 2 36999999764 44333 3334555653 4
Q ss_pred EEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEee
Q 037028 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLVEQ 372 (503)
Q Consensus 309 eF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~PkvvvlvE~ 372 (503)
+|. ..+++++... ..=+.|+.|.+ ++++..+ ...+.+....+-|+|.-+++.+.
T Consensus 210 ~~~--~~d~~~~~~~----~~fD~Ivs~~~--~~~~~~e--~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 210 VVI--PGKVEEVSLP----EQVDIIISEPM--GYMLFNE--RMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp EEE--ESCTTTCCCS----SCEEEEECCCC--HHHHTCH--HHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEE--ECchhhCccC----CCeEEEEEeCc--hHhcCcH--HHHHHHHHHHHhcCCCCEEEEEe
Confidence 553 3344443211 11134444333 3555433 22344555557899987777543
No 113
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=53.59 E-value=71 Score=29.67 Aligned_cols=97 Identities=21% Similarity=0.260 Sum_probs=51.2
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeeccccccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETL 320 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l 320 (503)
..-.|+|+|.+.| .+...|+.+ + .++|||+.+...++...++.. +. | +..+++++
T Consensus 54 ~~~~vLDiGcG~G--------~~~~~l~~~-~-----~~v~gvD~s~~~l~~a~~~~~------~~---~--~~~d~~~~ 108 (260)
T 2avn_A 54 NPCRVLDLGGGTG--------KWSLFLQER-G-----FEVVLVDPSKEMLEVAREKGV------KN---V--VEAKAEDL 108 (260)
T ss_dssp SCCEEEEETCTTC--------HHHHHHHTT-T-----CEEEEEESCHHHHHHHHHHTC------SC---E--EECCTTSC
T ss_pred CCCeEEEeCCCcC--------HHHHHHHHc-C-----CeEEEEeCCHHHHHHHHhhcC------CC---E--EECcHHHC
Confidence 4558999996533 244456654 2 489999988766665554432 11 2 22233333
Q ss_pred CcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 321 QAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
. ..++..=+|-+...++|+..+ ...+|+.+ +-|+|.-.+++.
T Consensus 109 ~-----~~~~~fD~v~~~~~~~~~~~~----~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 109 P-----FPSGAFEAVLALGDVLSYVEN----KDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp C-----SCTTCEEEEEECSSHHHHCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred C-----CCCCCEEEEEEcchhhhcccc----HHHHHHHHHHHcCCCeEEEEE
Confidence 2 223322223334444555432 34556555 568998555543
No 114
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=53.36 E-value=53 Score=29.19 Aligned_cols=104 Identities=15% Similarity=0.109 Sum_probs=53.4
Q ss_pred HHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEee
Q 037028 233 ILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLA 312 (503)
Q Consensus 233 ILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~ 312 (503)
+++.+.. ..-.|+|+|.+. |. +...| + .-++|||+.+...++.+.+++ -++ +|.
T Consensus 29 ~l~~~~~-~~~~vLdiG~G~----G~----~~~~l----~----~~~v~~vD~s~~~~~~a~~~~------~~~--~~~- 82 (211)
T 2gs9_A 29 ALKGLLP-PGESLLEVGAGT----GY----WLRRL----P----YPQKVGVEPSEAMLAVGRRRA------PEA--TWV- 82 (211)
T ss_dssp HHHTTCC-CCSEEEEETCTT----CH----HHHHC----C----CSEEEEECCCHHHHHHHHHHC------TTS--EEE-
T ss_pred HHHHhcC-CCCeEEEECCCC----CH----hHHhC----C----CCeEEEEeCCHHHHHHHHHhC------CCc--EEE-
Confidence 4444433 455899999653 32 22233 1 128999998876666655544 122 332
Q ss_pred ecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEE-EEEeec
Q 037028 313 VEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVV-MLVEQD 373 (503)
Q Consensus 313 v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvv-vlvE~e 373 (503)
..+++++. ..++..=+|-+...|||+.+ ...+|+.+ +-|+|.-. ++++.+
T Consensus 83 -~~d~~~~~-----~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 83 -RAWGEALP-----FPGESFDVVLLFTTLEFVED-----VERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp -CCCTTSCC-----SCSSCEEEEEEESCTTTCSC-----HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -EcccccCC-----CCCCcEEEEEEcChhhhcCC-----HHHHHHHHHHHcCCCCEEEEEecC
Confidence 22333332 22332222334456788753 23555554 66899744 444443
No 115
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=51.84 E-value=63 Score=31.73 Aligned_cols=102 Identities=15% Similarity=0.176 Sum_probs=52.7
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--EEEeeecccccc
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--FEFLAVEKSLET 319 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--FeF~~v~~~le~ 319 (503)
.-+|+|+|-| .|. |...++.+ | .-+++||+.+ ..++.+.++ ++..|+. .+| +..++++
T Consensus 39 ~~~VLDiGcG----tG~----ls~~la~~-g----~~~v~~vD~s-~~~~~a~~~----~~~~~~~~~i~~--~~~d~~~ 98 (328)
T 1g6q_1 39 DKIVLDVGCG----TGI----LSMFAAKH-G----AKHVIGVDMS-SIIEMAKEL----VELNGFSDKITL--LRGKLED 98 (328)
T ss_dssp TCEEEEETCT----TSH----HHHHHHHT-C----CSEEEEEESS-THHHHHHHH----HHHTTCTTTEEE--EESCTTT
T ss_pred CCEEEEecCc----cHH----HHHHHHHC-C----CCEEEEEChH-HHHHHHHHH----HHHcCCCCCEEE--EECchhh
Confidence 3489999964 332 33345554 2 2589999987 444444333 3444543 444 3334444
Q ss_pred cCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 320 LQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 320 l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
+... ...=++|+.+.+ .+++..+ .....+|..+ +-|+|.-+++.
T Consensus 99 ~~~~---~~~~D~Ivs~~~--~~~l~~~--~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 99 VHLP---FPKVDIIISEWM--GYFLLYE--SMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp SCCS---SSCEEEEEECCC--BTTBSTT--CCHHHHHHHHHHHEEEEEEEES
T ss_pred ccCC---CCcccEEEEeCc--hhhcccH--HHHHHHHHHHHhhcCCCeEEEE
Confidence 3211 011134444433 2333333 2355677766 67899877663
No 116
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=51.76 E-value=50 Score=31.91 Aligned_cols=111 Identities=12% Similarity=0.077 Sum_probs=58.6
Q ss_pred eEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--EEEeeeccccccc
Q 037028 243 VHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--FEFLAVEKSLETL 320 (503)
Q Consensus 243 VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--FeF~~v~~~le~l 320 (503)
-.|+|+|.|- | .+.-.|+.+ | ..++|||+.+...++.+.+++ +..|+. ++|.. .++.+.
T Consensus 125 ~~vLDlG~Gs----G----~~~~~la~~----~-~~~v~~vDis~~al~~A~~n~----~~~~l~~~v~~~~--~D~~~~ 185 (284)
T 1nv8_A 125 KTVADIGTGS----G----AIGVSVAKF----S-DAIVFATDVSSKAVEIARKNA----ERHGVSDRFFVRK--GEFLEP 185 (284)
T ss_dssp CEEEEESCTT----S----HHHHHHHHH----S-SCEEEEEESCHHHHHHHHHHH----HHTTCTTSEEEEE--SSTTGG
T ss_pred CEEEEEeCch----h----HHHHHHHHC----C-CCEEEEEECCHHHHHHHHHHH----HHcCCCCceEEEE--Ccchhh
Confidence 4799999753 3 334445554 2 479999999887777666654 445664 66643 233221
Q ss_pred CcccccccCCcEEEEEeccccc--cc----cccc-------cchHHHHHHHH-HhcCCcEEEEEeecC
Q 037028 321 QAKDINVEDGEVLVMNSILELH--CV----VKES-------RGALNSVLQRL-HQLSPKVVMLVEQDS 374 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~Lh--~l----~~es-------~~~~~~~L~~I-r~L~PkvvvlvE~ea 374 (503)
-+..+ .+-+.|+.|-.+.-. ++ ..+. ...++-+-+.+ +.++|.-++++|...
T Consensus 186 ~~~~f--~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 186 FKEKF--ASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp GGGGT--TTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred ccccc--CCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 11111 111677777443210 00 0111 01122333445 678898777777543
No 117
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=50.98 E-value=19 Score=29.87 Aligned_cols=38 Identities=21% Similarity=0.371 Sum_probs=32.5
Q ss_pred CCCCcEEEeeecCCc----hhHHHHHHHHHHHHhhCCCcEEEe
Q 037028 273 KVPKRLKITGVGNCS----ERLGEIGDELKRYADGLKLNFEFL 311 (503)
Q Consensus 273 gpP~~LRITgI~~~~----~~l~~tg~rL~~fA~~lgipFeF~ 311 (503)
||| .-|||...++. ..|+++.+.+.+..+..|..|+|+
T Consensus 50 gaP-~Y~i~~~~~D~k~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 50 GAP-RYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp STT-EEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred cCC-eEEEEEEecCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 577 79999888773 578899999999999999999985
No 118
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=50.81 E-value=69 Score=29.29 Aligned_cols=106 Identities=24% Similarity=0.239 Sum_probs=56.2
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEe
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFL 311 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~ 311 (503)
.+++.+.....-+|+|+|.+. |.- ...|+.+- | ..++|||+.+...++.+.++ .-.++|.
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~----G~~----~~~l~~~~---~-~~~v~~~D~s~~~~~~a~~~--------~~~~~~~ 83 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGP----GNS----TELLTDRY---G-VNVITGIDSDDDMLEKAADR--------LPNTNFG 83 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTT----THH----HHHHHHHH---C-TTSEEEEESCHHHHHHHHHH--------STTSEEE
T ss_pred HHHHhcCCCCCCEEEEecCcC----CHH----HHHHHHhC---C-CCEEEEEECCHHHHHHHHHh--------CCCcEEE
Confidence 345555444556899999753 332 22333331 2 25799999887666655544 1123443
Q ss_pred eecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 312 AVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 312 ~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
. .+++++. .++..=+|-|...|||+.+ ...+|+.+ +.|+|.-.+++
T Consensus 84 ~--~d~~~~~------~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~~ 130 (259)
T 2p35_A 84 K--ADLATWK------PAQKADLLYANAVFQWVPD-----HLAVLSQLMDQLESGGVLAV 130 (259)
T ss_dssp E--CCTTTCC------CSSCEEEEEEESCGGGSTT-----HHHHHHHHGGGEEEEEEEEE
T ss_pred E--CChhhcC------ccCCcCEEEEeCchhhCCC-----HHHHHHHHHHhcCCCeEEEE
Confidence 2 2333332 1222223334556788743 34566665 67899754444
No 119
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=49.40 E-value=42 Score=28.47 Aligned_cols=106 Identities=9% Similarity=0.057 Sum_probs=53.5
Q ss_pred eEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccCc
Q 037028 243 VHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQA 322 (503)
Q Consensus 243 VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~~ 322 (503)
-+|+|+|.+. | .+...|+.+ + + . +|||+.+...++.+.+++.. .++..+|. ..++.+..+
T Consensus 43 ~~vLD~GcG~----G----~~~~~l~~~--~-~-~--v~~vD~~~~~~~~a~~~~~~----~~~~~~~~--~~d~~~~~~ 102 (171)
T 1ws6_A 43 GRFLDPFAGS----G----AVGLEAASE--G-W-E--AVLVEKDPEAVRLLKENVRR----TGLGARVV--ALPVEVFLP 102 (171)
T ss_dssp CEEEEETCSS----C----HHHHHHHHT--T-C-E--EEEECCCHHHHHHHHHHHHH----HTCCCEEE--CSCHHHHHH
T ss_pred CeEEEeCCCc----C----HHHHHHHHC--C-C-e--EEEEeCCHHHHHHHHHHHHH----cCCceEEE--eccHHHHHH
Confidence 4799999753 3 234445554 2 2 3 99999887777666665543 34444443 223322111
Q ss_pred cccccc--CCcEEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEeecCC
Q 037028 323 KDINVE--DGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLVEQDSS 375 (503)
Q Consensus 323 ~~l~~~--~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~PkvvvlvE~ea~ 375 (503)
. +.-. .=+.|+.|..+. + .....+..+.+ .+-|+|.-+++++....
T Consensus 103 ~-~~~~~~~~D~i~~~~~~~-~----~~~~~~~~~~~-~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 103 E-AKAQGERFTVAFMAPPYA-M----DLAALFGELLA-SGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp H-HHHTTCCEEEEEECCCTT-S----CTTHHHHHHHH-HTCEEEEEEEEEEEETT
T ss_pred h-hhccCCceEEEEECCCCc-h----hHHHHHHHHHh-hcccCCCcEEEEEeCCc
Confidence 0 0000 114566665543 1 11112222332 35689987777665543
No 120
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=49.17 E-value=90 Score=27.01 Aligned_cols=43 Identities=23% Similarity=0.193 Sum_probs=29.4
Q ss_pred eEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHH
Q 037028 243 VHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKR 299 (503)
Q Consensus 243 VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~ 299 (503)
-+|+|+|.|. | .+...|+.+ .-++|||+.+...++.+.+++.+
T Consensus 24 ~~vLDiGcG~----G----~~~~~la~~------~~~v~~vD~s~~~l~~a~~~~~~ 66 (185)
T 3mti_A 24 SIVVDATMGN----G----NDTAFLAGL------SKKVYAFDVQEQALGKTSQRLSD 66 (185)
T ss_dssp CEEEESCCTT----S----HHHHHHHTT------SSEEEEEESCHHHHHHHHHHHHH
T ss_pred CEEEEEcCCC----C----HHHHHHHHh------CCEEEEEECCHHHHHHHHHHHHH
Confidence 3699999643 2 233446665 25899999988778777766654
No 121
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=49.09 E-value=61 Score=31.91 Aligned_cols=100 Identities=15% Similarity=0.130 Sum_probs=52.5
Q ss_pred Hhccchhhhh-HhhhHH----HHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHH
Q 037028 217 EICPQIQFGH-FVANAS----ILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLG 291 (503)
Q Consensus 217 e~~P~~kfah-ftANqA----ILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~ 291 (503)
.+.|=-+++. |..++. |++++.-...-+|+|+|-|. | .|-..|+.+. -++|||+.+.+.++
T Consensus 21 ~~~~~k~~GQnfL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~----G----~lT~~La~~~------~~V~aVEid~~li~ 86 (295)
T 3gru_A 21 MFKPKKKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGK----G----ILTEELAKNA------KKVYVIEIDKSLEP 86 (295)
T ss_dssp ---------CCEECCHHHHHHHHHHTTCCTTCEEEEECCTT----S----HHHHHHHHHS------SEEEEEESCGGGHH
T ss_pred CCCCccccCccccCCHHHHHHHHHhcCCCCcCEEEEECCCc----h----HHHHHHHhcC------CEEEEEECCHHHHH
Confidence 3455555664 555554 44455444556899999653 3 3455566551 47999998887777
Q ss_pred HHHHHHHHHHhhCCCcEEEeeecccccccCcccccccCCcEEEEEeccc
Q 037028 292 EIGDELKRYADGLKLNFEFLAVEKSLETLQAKDINVEDGEVLVMNSILE 340 (503)
Q Consensus 292 ~tg~rL~~fA~~lgipFeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~ 340 (503)
...+++.. .+ .++| +..+..++.... .+-++|+.|..+.
T Consensus 87 ~a~~~~~~----~~-~v~v--i~gD~l~~~~~~---~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 87 YANKLKEL----YN-NIEI--IWGDALKVDLNK---LDFNKVVANLPYQ 125 (295)
T ss_dssp HHHHHHHH----CS-SEEE--EESCTTTSCGGG---SCCSEEEEECCGG
T ss_pred HHHHHhcc----CC-CeEE--EECchhhCCccc---CCccEEEEeCccc
Confidence 77666541 11 2333 333444433322 1235788887764
No 122
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=48.32 E-value=76 Score=27.84 Aligned_cols=45 Identities=16% Similarity=0.084 Sum_probs=28.6
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHH
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELK 298 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~ 298 (503)
..-.|+|+|.+. | .+...|+.+ ++ . ++|||+.+...++.+.+++.
T Consensus 42 ~~~~vLdiGcG~----G----~~~~~l~~~--~~--~-~v~~~D~s~~~~~~a~~~~~ 86 (215)
T 2pxx_A 42 PEDRILVLGCGN----S----ALSYELFLG--GF--P-NVTSVDYSSVVVAAMQACYA 86 (215)
T ss_dssp TTCCEEEETCTT----C----SHHHHHHHT--TC--C-CEEEEESCHHHHHHHHHHTT
T ss_pred CCCeEEEECCCC----c----HHHHHHHHc--CC--C-cEEEEeCCHHHHHHHHHhcc
Confidence 445799999643 3 233445554 22 2 89999988777766666543
No 123
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=48.16 E-value=76 Score=27.30 Aligned_cols=108 Identities=17% Similarity=0.107 Sum_probs=55.1
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--EEEeeecccccc
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--FEFLAVEKSLET 319 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--FeF~~v~~~le~ 319 (503)
.-+|+|+|.+.| . +...++.++ .-++|||+.+...++.+.+++.. .|++ .+|.. .++.+
T Consensus 45 ~~~vLD~GcG~G----~----~~~~~~~~~-----~~~v~~vD~~~~~~~~a~~~~~~----~~~~~~~~~~~--~d~~~ 105 (187)
T 2fhp_A 45 GGMALDLYSGSG----G----LAIEAVSRG-----MDKSICIEKNFAALKVIKENIAI----TKEPEKFEVRK--MDANR 105 (187)
T ss_dssp SCEEEETTCTTC----H----HHHHHHHTT-----CSEEEEEESCHHHHHHHHHHHHH----HTCGGGEEEEE--SCHHH
T ss_pred CCCEEEeCCccC----H----HHHHHHHcC-----CCEEEEEECCHHHHHHHHHHHHH----hCCCcceEEEE--CcHHH
Confidence 348999997533 2 222244432 25899999887777766665543 3442 55543 23322
Q ss_pred cCccc-ccccCCcEEEEEeccccccccccccchHHHHHHH---HHhcCCcEEEEEeecCCC
Q 037028 320 LQAKD-INVEDGEVLVMNSILELHCVVKESRGALNSVLQR---LHQLSPKVVMLVEQDSSH 376 (503)
Q Consensus 320 l~~~~-l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~---Ir~L~PkvvvlvE~ea~~ 376 (503)
..+.. ..-..=+.|+.|..+..+ ....+++. .+-|+|.-+++++.....
T Consensus 106 ~~~~~~~~~~~fD~i~~~~~~~~~--------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 106 ALEQFYEEKLQFDLVLLDPPYAKQ--------EIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHHHHHHTTCCEEEEEECCCGGGC--------CHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHHHHHhcCCCCCEEEECCCCCch--------hHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 21100 000111456666554211 11234444 456899877777655443
No 124
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=47.95 E-value=95 Score=27.85 Aligned_cols=103 Identities=13% Similarity=0.059 Sum_probs=53.6
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHh---------hCCCcEEEe
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYAD---------GLKLNFEFL 311 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~---------~lgipFeF~ 311 (503)
..-+|+|+|.|- | .+...|+.+ | .++|||+.+...++.+.++...-.. -.+-..+|.
T Consensus 22 ~~~~vLD~GCG~----G----~~~~~la~~-g-----~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~ 87 (203)
T 1pjz_A 22 PGARVLVPLCGK----S----QDMSWLSGQ-G-----YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIW 87 (203)
T ss_dssp TTCEEEETTTCC----S----HHHHHHHHH-C-----CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEE
T ss_pred CCCEEEEeCCCC----c----HhHHHHHHC-C-----CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEE
Confidence 445799999643 2 233457765 2 4899999988777766554321000 001223333
Q ss_pred eecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcE
Q 037028 312 AVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKV 366 (503)
Q Consensus 312 ~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkv 366 (503)
. .++.++...+ .+..=+|.+...||++..+ ....+++.+ |-|+|.-
T Consensus 88 ~--~d~~~l~~~~----~~~fD~v~~~~~l~~l~~~---~~~~~l~~~~r~LkpgG 134 (203)
T 1pjz_A 88 C--GDFFALTARD----IGHCAAFYDRAAMIALPAD---MRERYVQHLEALMPQAC 134 (203)
T ss_dssp E--ECCSSSTHHH----HHSEEEEEEESCGGGSCHH---HHHHHHHHHHHHSCSEE
T ss_pred E--CccccCCccc----CCCEEEEEECcchhhCCHH---HHHHHHHHHHHHcCCCc
Confidence 2 2333333211 0222233344567887532 244567666 5699975
No 125
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=47.15 E-value=1.9e+02 Score=27.20 Aligned_cols=106 Identities=21% Similarity=0.236 Sum_probs=59.3
Q ss_pred CceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccc
Q 037028 240 ESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLET 319 (503)
Q Consensus 240 ~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~ 319 (503)
.+...|+|+|.+.| . +...|+.+- |+ ..++|||+.+...++.+.+++ +..+..++|.. .++++
T Consensus 21 ~~~~~vLDiGcG~G-----~---~~~~l~~~~--~~-~~~v~gvD~s~~~~~~a~~~~----~~~~~~v~~~~--~d~~~ 83 (284)
T 3gu3_A 21 TKPVHIVDYGCGYG-----Y---LGLVLMPLL--PE-GSKYTGIDSGETLLAEARELF----RLLPYDSEFLE--GDATE 83 (284)
T ss_dssp CSCCEEEEETCTTT-----H---HHHHHTTTS--CT-TCEEEEEESCHHHHHHHHHHH----HSSSSEEEEEE--SCTTT
T ss_pred CCCCeEEEecCCCC-----H---HHHHHHHhC--CC-CCEEEEEECCHHHHHHHHHHH----HhcCCceEEEE--cchhh
Confidence 35678999997533 2 334455542 22 379999998876666555543 44555566643 33333
Q ss_pred cCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcE-EEEEeec
Q 037028 320 LQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKV-VMLVEQD 373 (503)
Q Consensus 320 l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkv-vvlvE~e 373 (503)
+.. ++..=+|-+...|||+.+. ..+|+.+ +.|+|.- ++++|.+
T Consensus 84 ~~~------~~~fD~v~~~~~l~~~~~~-----~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 84 IEL------NDKYDIAICHAFLLHMTTP-----ETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CCC------SSCEEEEEEESCGGGCSSH-----HHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCc------CCCeeEEEECChhhcCCCH-----HHHHHHHHHHcCCCCEEEEEecc
Confidence 322 2223334444556887542 3555554 6789974 4445554
No 126
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=46.78 E-value=20 Score=38.42 Aligned_cols=84 Identities=25% Similarity=0.337 Sum_probs=51.7
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCC-CcEEEeeecccccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLK-LNFEFLAVEKSLET 319 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lg-ipFeF~~v~~~le~ 319 (503)
+.+.|+|+|.|- | .|-..||.+ | -++|||+.....++.+. ..|+.-| ++.+|... +.|+
T Consensus 66 ~~~~vLDvGCG~----G----~~~~~la~~-g-----a~V~giD~~~~~i~~a~----~~a~~~~~~~~~~~~~--~~~~ 125 (569)
T 4azs_A 66 RPLNVLDLGCAQ----G----FFSLSLASK-G-----ATIVGIDFQQENINVCR----ALAEENPDFAAEFRVG--RIEE 125 (569)
T ss_dssp SCCEEEEETCTT----S----HHHHHHHHT-T-----CEEEEEESCHHHHHHHH----HHHHTSTTSEEEEEEC--CHHH
T ss_pred CCCeEEEECCCC----c----HHHHHHHhC-C-----CEEEEECCCHHHHHHHH----HHHHhcCCCceEEEEC--CHHH
Confidence 457899999642 3 377788875 3 47999998876665543 3455555 67777653 3444
Q ss_pred cCcccccccCCcEEEEEecccccccccc
Q 037028 320 LQAKDINVEDGEVLVMNSILELHCVVKE 347 (503)
Q Consensus 320 l~~~~l~~~~~EaLaVN~~~~Lh~l~~e 347 (503)
+... ..++..=||-|+--|||+.+.
T Consensus 126 ~~~~---~~~~~fD~v~~~e~~ehv~~~ 150 (569)
T 4azs_A 126 VIAA---LEEGEFDLAIGLSVFHHIVHL 150 (569)
T ss_dssp HHHH---CCTTSCSEEEEESCHHHHHHH
T ss_pred Hhhh---ccCCCccEEEECcchhcCCCH
Confidence 3211 123333356667778999864
No 127
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=46.41 E-value=40 Score=32.34 Aligned_cols=88 Identities=13% Similarity=0.144 Sum_probs=50.1
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEe
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFL 311 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~ 311 (503)
.|++++.-...-+|+|+|-|.| .|-..|+.+. -++|||+.+.+.++...+++.. .-.+++
T Consensus 20 ~iv~~~~~~~~~~VLEIG~G~G--------~lt~~La~~~------~~V~avEid~~~~~~~~~~~~~-----~~~v~~- 79 (255)
T 3tqs_A 20 KIVSAIHPQKTDTLVEIGPGRG--------ALTDYLLTEC------DNLALVEIDRDLVAFLQKKYNQ-----QKNITI- 79 (255)
T ss_dssp HHHHHHCCCTTCEEEEECCTTT--------TTHHHHTTTS------SEEEEEECCHHHHHHHHHHHTT-----CTTEEE-
T ss_pred HHHHhcCCCCcCEEEEEccccc--------HHHHHHHHhC------CEEEEEECCHHHHHHHHHHHhh-----CCCcEE-
Confidence 3566665555668999996543 4667777762 3799999887777666665532 123444
Q ss_pred eecccccccCcccccccCCcEEEEEeccc
Q 037028 312 AVEKSLETLQAKDINVEDGEVLVMNSILE 340 (503)
Q Consensus 312 ~v~~~le~l~~~~l~~~~~EaLaVN~~~~ 340 (503)
+..+..+++...+.-...-.|+-|..+.
T Consensus 80 -i~~D~~~~~~~~~~~~~~~~vv~NlPY~ 107 (255)
T 3tqs_A 80 -YQNDALQFDFSSVKTDKPLRVVGNLPYN 107 (255)
T ss_dssp -EESCTTTCCGGGSCCSSCEEEEEECCHH
T ss_pred -EEcchHhCCHHHhccCCCeEEEecCCcc
Confidence 3344444443332101111366676654
No 128
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=46.31 E-value=67 Score=32.26 Aligned_cols=110 Identities=15% Similarity=0.096 Sum_probs=59.0
Q ss_pred CceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC--cEEEeeecccc
Q 037028 240 ESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL--NFEFLAVEKSL 317 (503)
Q Consensus 240 ~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi--pFeF~~v~~~l 317 (503)
...-.|+|+|.|- | .+.-.++.+. + .-+|+|++.+...++.+.+++ +..|+ ..+|.. .+.
T Consensus 216 ~~~~~vLD~gCGs----G----~~~i~~a~~~--~--~~~v~g~Dis~~~l~~A~~n~----~~~gl~~~i~~~~--~D~ 277 (373)
T 3tm4_A 216 LDGGSVLDPMCGS----G----TILIELALRR--Y--SGEIIGIEKYRKHLIGAEMNA----LAAGVLDKIKFIQ--GDA 277 (373)
T ss_dssp CCSCCEEETTCTT----C----HHHHHHHHTT--C--CSCEEEEESCHHHHHHHHHHH----HHTTCGGGCEEEE--CCG
T ss_pred CCCCEEEEccCcC----c----HHHHHHHHhC--C--CCeEEEEeCCHHHHHHHHHHH----HHcCCCCceEEEE--CCh
Confidence 3445799999653 3 2444455542 1 248999999887787776665 44566 455543 233
Q ss_pred cccCcccccccCCcEEEEEeccccccccccccch-HHHHHHHHHh-cCCcEEEEE
Q 037028 318 ETLQAKDINVEDGEVLVMNSILELHCVVKESRGA-LNSVLQRLHQ-LSPKVVMLV 370 (503)
Q Consensus 318 e~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~-~~~~L~~Ir~-L~Pkvvvlv 370 (503)
.++.... ..=++|+.|-.+..+--..+.... ...+++.++. |++.+++++
T Consensus 278 ~~~~~~~---~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~ 329 (373)
T 3tm4_A 278 TQLSQYV---DSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVLEKRGVFIT 329 (373)
T ss_dssp GGGGGTC---SCEEEEEEECCCC------CCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhCCccc---CCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 3332211 223578888777542111111111 2467777766 655666654
No 129
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=46.25 E-value=51 Score=32.59 Aligned_cols=112 Identities=12% Similarity=0.131 Sum_probs=60.0
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhC-CCcEEEeeeccccccc
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGL-KLNFEFLAVEKSLETL 320 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~l-gipFeF~~v~~~le~l 320 (503)
.-+|+|+|.|-| .+...++.++ | ..++|+|+.+...++.+.+++..++..+ +-.++|.. .+..+.
T Consensus 117 ~~~VLdiG~G~G--------~~~~~l~~~~---~-~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~--~D~~~~ 182 (321)
T 2pt6_A 117 PKNVLVVGGGDG--------GIIRELCKYK---S-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI--EDASKF 182 (321)
T ss_dssp CCEEEEEECTTC--------HHHHHHTTCT---T-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE--SCHHHH
T ss_pred CCEEEEEcCCcc--------HHHHHHHHcC---C-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE--ccHHHH
Confidence 357999997543 2455566542 3 4799999988877777766654432222 12344432 222111
Q ss_pred CcccccccCCcEEEEEeccccccccccccchH--HHHHHHH-HhcCCcEEEEEeecC
Q 037028 321 QAKDINVEDGEVLVMNSILELHCVVKESRGAL--NSVLQRL-HQLSPKVVMLVEQDS 374 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~--~~~L~~I-r~L~PkvvvlvE~ea 374 (503)
-+. . -..=++|++|....++. . ..+ ..+++.+ +.|+|.-+++++...
T Consensus 183 l~~-~-~~~fDvIi~d~~~p~~~--~---~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 183 LEN-V-TNTYDVIIVDSSDPIGP--A---ETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp HHH-C-CSCEEEEEEECCCSSSG--G---GGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred Hhh-c-CCCceEEEECCcCCCCc--c---hhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 000 0 01125677776432221 0 111 4566666 568999888887543
No 130
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=45.68 E-value=1.4e+02 Score=28.28 Aligned_cols=109 Identities=15% Similarity=0.128 Sum_probs=58.1
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEe
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFL 311 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~ 311 (503)
.|++++.-...-+|+|+|-|. -.|-..|+.++ .-++|||+.+...++...++ . +-.++|
T Consensus 22 ~iv~~~~~~~~~~VLDiG~G~--------G~lt~~L~~~~-----~~~v~avEid~~~~~~~~~~-----~--~~~v~~- 80 (249)
T 3ftd_A 22 KIAEELNIEEGNTVVEVGGGT--------GNLTKVLLQHP-----LKKLYVIELDREMVENLKSI-----G--DERLEV- 80 (249)
T ss_dssp HHHHHTTCCTTCEEEEEESCH--------HHHHHHHTTSC-----CSEEEEECCCHHHHHHHTTS-----C--CTTEEE-
T ss_pred HHHHhcCCCCcCEEEEEcCch--------HHHHHHHHHcC-----CCeEEEEECCHHHHHHHHhc-----c--CCCeEE-
Confidence 355555544556899999643 35777888762 25899999875444433322 0 122333
Q ss_pred eecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHHHhc--CCcEEEEEeec
Q 037028 312 AVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQL--SPKVVMLVEQD 373 (503)
Q Consensus 312 ~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L--~PkvvvlvE~e 373 (503)
+..+..+++...+. +.-.++-|..+... ..-+++.+... -+..++++..|
T Consensus 81 -i~~D~~~~~~~~~~--~~~~vv~NlPy~i~---------~~il~~ll~~~~~~~~~~~m~Qke 132 (249)
T 3ftd_A 81 -INEDASKFPFCSLG--KELKVVGNLPYNVA---------SLIIENTVYNKDCVPLAVFMVQKE 132 (249)
T ss_dssp -ECSCTTTCCGGGSC--SSEEEEEECCTTTH---------HHHHHHHHHTGGGCSEEEEEEEHH
T ss_pred -EEcchhhCChhHcc--CCcEEEEECchhcc---------HHHHHHHHhcCCCCceEEEEEeHH
Confidence 44444444443321 12256666665321 12344444432 45677777665
No 131
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=45.48 E-value=99 Score=30.81 Aligned_cols=135 Identities=12% Similarity=0.051 Sum_probs=71.1
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhC-CCcEEEeeeccccccc
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGL-KLNFEFLAVEKSLETL 320 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~l-gipFeF~~v~~~le~l 320 (503)
.-+|+|+|.|.| .+...|+.+ +| .-+||+|+.+...++.+.+++.+++..+ +-.++|.. .+..+.
T Consensus 121 ~~~VLdIG~G~G--------~~a~~la~~---~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~--~D~~~~ 186 (334)
T 1xj5_A 121 PKKVLVIGGGDG--------GVLREVARH---AS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI--GDGVAF 186 (334)
T ss_dssp CCEEEEETCSSS--------HHHHHHTTC---TT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE--SCHHHH
T ss_pred CCEEEEECCCcc--------HHHHHHHHc---CC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE--CCHHHH
Confidence 358999997543 245556655 23 4799999998888888877776654333 12355532 222111
Q ss_pred CcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEeecCCCCCCchHHHHHHHHHHHHHHHh
Q 037028 321 QAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFD 397 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE~ea~~ns~~F~~RF~eAL~yYsAlFD 397 (503)
-+ .+.-..=++|++|+....+.. .. -....+++.+ +.|+|.-++++..+.-...+.. +.+.+.-...+|.
T Consensus 187 l~-~~~~~~fDlIi~d~~~p~~~~-~~--l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~---~~~~~~~l~~~F~ 257 (334)
T 1xj5_A 187 LK-NAAEGSYDAVIVDSSDPIGPA-KE--LFEKPFFQSVARALRPGGVVCTQAESLWLHMDI---IEDIVSNCREIFK 257 (334)
T ss_dssp HH-TSCTTCEEEEEECCCCTTSGG-GG--GGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHH---HHHHHHHHHHHCS
T ss_pred HH-hccCCCccEEEECCCCccCcc-hh--hhHHHHHHHHHHhcCCCcEEEEecCCccccHHH---HHHHHHHHHHhCc
Confidence 00 000011156676664333221 10 0013566655 6789998888765544333322 3333444445555
No 132
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=45.44 E-value=1.6e+02 Score=25.89 Aligned_cols=93 Identities=19% Similarity=0.198 Sum_probs=51.4
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeeccccccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETL 320 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l 320 (503)
+.-+|+|+|.|. |. +...|+.+ + + -++|||+.+...++.+.+++ +..|+..+|. ..+..++
T Consensus 49 ~~~~vlD~g~G~----G~----~~~~l~~~-~--~--~~v~~vD~~~~~~~~a~~~~----~~~~~~~~~~--~~d~~~~ 109 (207)
T 1wy7_A 49 EGKVVADLGAGT----GV----LSYGALLL-G--A--KEVICVEVDKEAVDVLIENL----GEFKGKFKVF--IGDVSEF 109 (207)
T ss_dssp TTCEEEEETCTT----CH----HHHHHHHT-T--C--SEEEEEESCHHHHHHHHHHT----GGGTTSEEEE--ESCGGGC
T ss_pred CcCEEEEeeCCC----CH----HHHHHHHc-C--C--CEEEEEECCHHHHHHHHHHH----HHcCCCEEEE--ECchHHc
Confidence 345899999753 32 44456655 1 2 38999998877776655544 4456655543 3344443
Q ss_pred CcccccccCCcEEEEEeccccccccccccchHHHHHHHHHhcC
Q 037028 321 QAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLS 363 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~ 363 (503)
. ..=++|+.|..+.. ... +....+|+.+.++-
T Consensus 110 ~------~~~D~v~~~~p~~~--~~~---~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 110 N------SRVDIVIMNPPFGS--QRK---HADRPFLLKAFEIS 141 (207)
T ss_dssp C------CCCSEEEECCCCSS--SST---TTTHHHHHHHHHHC
T ss_pred C------CCCCEEEEcCCCcc--ccC---CchHHHHHHHHHhc
Confidence 2 12357888877633 221 12234565554444
No 133
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=44.94 E-value=1.1e+02 Score=27.85 Aligned_cols=106 Identities=12% Similarity=0.084 Sum_probs=53.6
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeeccccccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETL 320 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l 320 (503)
..-+|+|+|.|- | .+...|+.+ ++ -++|||+.+...++.+.+ .++..+...+|. ..+++++
T Consensus 60 ~~~~vLDiGcGt----G----~~~~~l~~~---~~--~~v~gvD~s~~~l~~a~~----~~~~~~~~v~~~--~~d~~~~ 120 (236)
T 1zx0_A 60 KGGRVLEVGFGM----A----IAASKVQEA---PI--DEHWIIECNDGVFQRLRD----WAPRQTHKVIPL--KGLWEDV 120 (236)
T ss_dssp TCEEEEEECCTT----S----HHHHHHHTS---CE--EEEEEEECCHHHHHHHHH----HGGGCSSEEEEE--ESCHHHH
T ss_pred CCCeEEEEeccC----C----HHHHHHHhc---CC--CeEEEEcCCHHHHHHHHH----HHHhcCCCeEEE--ecCHHHh
Confidence 456899999653 3 233444443 12 389999988776665555 344556555553 3344433
Q ss_pred CcccccccCC--cEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 321 QAKDINVEDG--EVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 321 ~~~~l~~~~~--EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
.. ...++ ++|+.+ .+.+ +.........+.+|+.+ |-|+|.-+++.
T Consensus 121 ~~---~~~~~~fD~V~~d-~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 121 AP---TLPDGHFDGILYD-TYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp GG---GSCTTCEEEEEEC-CCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred hc---ccCCCceEEEEEC-Cccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEE
Confidence 11 11222 344431 2322 11111112234555555 67899866553
No 134
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=44.76 E-value=81 Score=30.21 Aligned_cols=134 Identities=13% Similarity=0.108 Sum_probs=70.0
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCC-CcEEEeeecccccc-
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLK-LNFEFLAVEKSLET- 319 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lg-ipFeF~~v~~~le~- 319 (503)
.-+|+|+|.|.| .+...++.++ | .-+||+|+.+...++.+.+++.+.+..++ =.+++.. .+..+
T Consensus 76 ~~~VLdiG~G~G--------~~~~~l~~~~---~-~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~--~D~~~~ 141 (275)
T 1iy9_A 76 PEHVLVVGGGDG--------GVIREILKHP---S-VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV--DDGFMH 141 (275)
T ss_dssp CCEEEEESCTTC--------HHHHHHTTCT---T-CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE--SCSHHH
T ss_pred CCEEEEECCchH--------HHHHHHHhCC---C-CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE--CcHHHH
Confidence 457999997543 3445566553 3 47999999988888877777766644442 2244432 22111
Q ss_pred cCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEeecCCCCCCch-HHHHHHHHHHHHHHHh
Q 037028 320 LQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVEQDSSHNGPFF-LGRFMEALHYYSAIFD 397 (503)
Q Consensus 320 l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE~ea~~ns~~F-~~RF~eAL~yYsAlFD 397 (503)
+... -..=++|+++... +....+.- ....|++.+ +.|+|.-++++.... +.+ ...+.+.+.....+|.
T Consensus 142 l~~~---~~~fD~Ii~d~~~--~~~~~~~l-~~~~~~~~~~~~L~pgG~lv~~~~~----~~~~~~~~~~~~~~l~~~F~ 211 (275)
T 1iy9_A 142 IAKS---ENQYDVIMVDSTE--PVGPAVNL-FTKGFYAGIAKALKEDGIFVAQTDN----PWFTPELITNVQRDVKEIFP 211 (275)
T ss_dssp HHTC---CSCEEEEEESCSS--CCSCCCCC-STTHHHHHHHHHEEEEEEEEEECCC----TTTCHHHHHHHHHHHHTTCS
T ss_pred HhhC---CCCeeEEEECCCC--CCCcchhh-hHHHHHHHHHHhcCCCcEEEEEcCC----ccccHHHHHHHHHHHHHhCC
Confidence 1110 0112566666543 21111000 013556555 679999888776432 222 3445555555555554
Q ss_pred hh
Q 037028 398 SL 399 (503)
Q Consensus 398 SL 399 (503)
..
T Consensus 212 ~v 213 (275)
T 1iy9_A 212 IT 213 (275)
T ss_dssp EE
T ss_pred Ce
Confidence 43
No 135
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=44.75 E-value=56 Score=33.46 Aligned_cols=100 Identities=18% Similarity=0.147 Sum_probs=53.4
Q ss_pred EEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccCcc
Q 037028 244 HVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQAK 323 (503)
Q Consensus 244 HIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~~~ 323 (503)
+|+|+|-| ..+-++ +|.|.|. -|++||+.+. .+ +..+ +.++..|+.=....+..+++++...
T Consensus 86 ~VLDvG~G------tGiLs~---~Aa~aGA----~~V~ave~s~-~~-~~a~---~~~~~n~~~~~i~~i~~~~~~~~lp 147 (376)
T 4hc4_A 86 TVLDVGAG------TGILSI---FCAQAGA----RRVYAVEASA-IW-QQAR---EVVRFNGLEDRVHVLPGPVETVELP 147 (376)
T ss_dssp EEEEETCT------TSHHHH---HHHHTTC----SEEEEEECST-TH-HHHH---HHHHHTTCTTTEEEEESCTTTCCCS
T ss_pred EEEEeCCC------ccHHHH---HHHHhCC----CEEEEEeChH-HH-HHHH---HHHHHcCCCceEEEEeeeeeeecCC
Confidence 59999953 333444 4556653 3899999652 22 3333 3345556543344455556655421
Q ss_pred cccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEE
Q 037028 324 DINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVML 369 (503)
Q Consensus 324 ~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvl 369 (503)
+.+=+|-|..--+.|+.| +.++.+|... |-|+|.-+++
T Consensus 148 ------e~~DvivsE~~~~~l~~e--~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 148 ------EQVDAIVSEWMGYGLLHE--SMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp ------SCEEEEECCCCBTTBTTT--CSHHHHHHHHHHHEEEEEEEE
T ss_pred ------ccccEEEeeccccccccc--chhhhHHHHHHhhCCCCceEC
Confidence 112222222222445555 3467888877 5678886554
No 136
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=44.51 E-value=95 Score=30.13 Aligned_cols=86 Identities=19% Similarity=0.084 Sum_probs=47.3
Q ss_pred hHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC-cE
Q 037028 230 NASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL-NF 308 (503)
Q Consensus 230 NqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi-pF 308 (503)
.+.|++++.-...-.|+|+|-|.| .+...|+.+ + -++|||+.+...++.+.+++. ..|+ .+
T Consensus 31 ~~~i~~~~~~~~~~~VLDiG~G~G--------~lt~~La~~-~-----~~v~~vDi~~~~~~~a~~~~~----~~~~~~v 92 (299)
T 2h1r_A 31 LDKIIYAAKIKSSDIVLEIGCGTG--------NLTVKLLPL-A-----KKVITIDIDSRMISEVKKRCL----YEGYNNL 92 (299)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTS--------TTHHHHTTT-S-----SEEEEECSCHHHHHHHHHHHH----HTTCCCE
T ss_pred HHHHHHhcCCCCcCEEEEEcCcCc--------HHHHHHHhc-C-----CEEEEEECCHHHHHHHHHHHH----HcCCCce
Confidence 345556655445558999997533 244566665 2 389999988777766665543 2343 23
Q ss_pred EEeeecccccccCcccccccCCcEEEEEeccc
Q 037028 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILE 340 (503)
Q Consensus 309 eF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~ 340 (503)
+| +..+..++... .=+.|+.|..+.
T Consensus 93 ~~--~~~D~~~~~~~-----~~D~Vv~n~py~ 117 (299)
T 2h1r_A 93 EV--YEGDAIKTVFP-----KFDVCTANIPYK 117 (299)
T ss_dssp EC------CCSSCCC-----CCSEEEEECCGG
T ss_pred EE--EECchhhCCcc-----cCCEEEEcCCcc
Confidence 33 33333333221 224777776653
No 137
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=44.50 E-value=1.5e+02 Score=29.97 Aligned_cols=107 Identities=18% Similarity=0.217 Sum_probs=60.3
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeeccccccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETL 320 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l 320 (503)
+.-+|+|+|.+.| .+...|+.+ + .++|+|+.+...++.+.+++ +..|+..+|.. .++.+.
T Consensus 233 ~~~~VLDlGcG~G--------~~~~~la~~-g-----~~V~gvDis~~al~~A~~n~----~~~~~~v~~~~--~D~~~~ 292 (381)
T 3dmg_A 233 RGRQVLDLGAGYG--------ALTLPLARM-G-----AEVVGVEDDLASVLSLQKGL----EANALKAQALH--SDVDEA 292 (381)
T ss_dssp TTCEEEEETCTTS--------TTHHHHHHT-T-----CEEEEEESBHHHHHHHHHHH----HHTTCCCEEEE--CSTTTT
T ss_pred CCCEEEEEeeeCC--------HHHHHHHHc-C-----CEEEEEECCHHHHHHHHHHH----HHcCCCeEEEE--cchhhc
Confidence 4458999997543 234445554 2 48999998877777666655 44566656543 233332
Q ss_pred CcccccccCCcEEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEEee
Q 037028 321 QAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQR-LHQLSPKVVMLVEQ 372 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~-Ir~L~PkvvvlvE~ 372 (503)
... -..=+.|+.|..| |+...........+++. .+.|+|.-.+++..
T Consensus 293 ~~~---~~~fD~Ii~npp~--~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 293 LTE---EARFDIIVTNPPF--HVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp SCT---TCCEEEEEECCCC--CTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccc---CCCeEEEEECCch--hhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 221 0112466666665 55322222234456654 46789986666553
No 138
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=43.06 E-value=1.7e+02 Score=26.46 Aligned_cols=111 Identities=12% Similarity=0.173 Sum_probs=56.1
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc-EEEeeecccccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN-FEFLAVEKSLET 319 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip-FeF~~v~~~le~ 319 (503)
+.-.|+|+|.|.| .+...||.+. | ..++|||+.+...++.+.+++ +..|++ ++|. ..++.+
T Consensus 38 ~~~~vLDiGcG~G--------~~~~~la~~~---p-~~~v~giD~s~~~l~~a~~~~----~~~~~~nv~~~--~~d~~~ 99 (213)
T 2fca_A 38 DNPIHIEVGTGKG--------QFISGMAKQN---P-DINYIGIELFKSVIVTAVQKV----KDSEAQNVKLL--NIDADT 99 (213)
T ss_dssp CCCEEEEECCTTS--------HHHHHHHHHC---T-TSEEEEECSCHHHHHHHHHHH----HHSCCSSEEEE--CCCGGG
T ss_pred CCceEEEEecCCC--------HHHHHHHHHC---C-CCCEEEEEechHHHHHHHHHH----HHcCCCCEEEE--eCCHHH
Confidence 3446999997533 2334455542 3 479999998877777666654 344553 5553 233333
Q ss_pred cCcccccccCC--cEEEEEeccccccccccccc-hHHHHHHHH-HhcCCcEEEEEee
Q 037028 320 LQAKDINVEDG--EVLVMNSILELHCVVKESRG-ALNSVLQRL-HQLSPKVVMLVEQ 372 (503)
Q Consensus 320 l~~~~l~~~~~--EaLaVN~~~~Lh~l~~es~~-~~~~~L~~I-r~L~PkvvvlvE~ 372 (503)
+.. . +.++ +.|.+|+....+.-..+... ....+|+.+ +-|+|.-.+++.-
T Consensus 100 l~~-~--~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 100 LTD-V--FEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp HHH-H--CCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred HHh-h--cCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 210 0 1122 34555543211110000000 014566666 4589986666554
No 139
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=42.19 E-value=1.7e+02 Score=25.44 Aligned_cols=98 Identities=16% Similarity=0.191 Sum_probs=52.3
Q ss_pred EEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccCcc
Q 037028 244 HVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQAK 323 (503)
Q Consensus 244 HIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~~~ 323 (503)
.|+|+|.+.| .+...|+.+ + .++|||+.+...++.+.+++.+ .|+.++|.. .+++++.
T Consensus 32 ~vLdiGcG~G--------~~~~~l~~~-~-----~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~--~d~~~~~-- 89 (202)
T 2kw5_A 32 KILCLAEGEG--------RNACFLASL-G-----YEVTAVDQSSVGLAKAKQLAQE----KGVKITTVQ--SNLADFD-- 89 (202)
T ss_dssp EEEECCCSCT--------HHHHHHHTT-T-----CEEEEECSSHHHHHHHHHHHHH----HTCCEEEEC--CBTTTBS--
T ss_pred CEEEECCCCC--------HhHHHHHhC-C-----CeEEEEECCHHHHHHHHHHHHh----cCCceEEEE--cChhhcC--
Confidence 8999996532 234556654 2 4899999887777666665543 344555543 2333332
Q ss_pred cccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 324 DINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 324 ~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
+.-..=+.|+.+ + .|+.. .....+|+.+ +.|+|.-.+++.
T Consensus 90 -~~~~~fD~v~~~--~--~~~~~---~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 90 -IVADAWEGIVSI--F--CHLPS---SLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp -CCTTTCSEEEEE--C--CCCCH---HHHHHHHHHHHTTCCSSEEEEEE
T ss_pred -CCcCCccEEEEE--h--hcCCH---HHHHHHHHHHHHhcCCCcEEEEE
Confidence 111112444432 2 23321 2234566665 568997555543
No 140
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=42.06 E-value=1.6e+02 Score=27.53 Aligned_cols=54 Identities=17% Similarity=0.332 Sum_probs=33.3
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc-EEE
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN-FEF 310 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip-FeF 310 (503)
...+|+|+|.|- |. +...|+.+. | ..++|||+.+...++.+.++... .|++ .+|
T Consensus 109 ~~~~vLDlG~Gs----G~----~~~~la~~~---~-~~~v~~vD~s~~~l~~a~~n~~~----~~~~~v~~ 163 (276)
T 2b3t_A 109 QPCRILDLGTGT----GA----IALALASER---P-DCEIIAVDRMPDAVSLAQRNAQH----LAIKNIHI 163 (276)
T ss_dssp SCCEEEEETCTT----SH----HHHHHHHHC---T-TSEEEEECSSHHHHHHHHHHHHH----HTCCSEEE
T ss_pred CCCEEEEecCCc----cH----HHHHHHHhC---C-CCEEEEEECCHHHHHHHHHHHHH----cCCCceEE
Confidence 445899999653 32 233444332 2 37999999887777776666543 4554 444
No 141
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=41.68 E-value=1.9e+02 Score=27.22 Aligned_cols=105 Identities=14% Similarity=0.034 Sum_probs=56.8
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHH-H------H-h------hCCC
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKR-Y------A-D------GLKL 306 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~-f------A-~------~lgi 306 (503)
..-.|+|+|.|-| .++..||.+ | .++|||+.+...++.+.++... + + . ..+.
T Consensus 68 ~~~~vLD~GCG~G--------~~~~~La~~-G-----~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (252)
T 2gb4_A 68 SGLRVFFPLCGKA--------IEMKWFADR-G-----HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSG 133 (252)
T ss_dssp CSCEEEETTCTTC--------THHHHHHHT-T-----CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTS
T ss_pred CCCeEEEeCCCCc--------HHHHHHHHC-C-----CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCC
Confidence 4568999996533 234557765 2 4899999987777655433210 0 0 0 0123
Q ss_pred cEEEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE
Q 037028 307 NFEFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVM 368 (503)
Q Consensus 307 pFeF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvv 368 (503)
..+|.. .++.++.+.. .+..=+|-+...||++..+ ....+++.+ +-|+|.-.+
T Consensus 134 ~i~~~~--~D~~~l~~~~----~~~FD~V~~~~~l~~l~~~---~~~~~l~~~~~~LkpGG~l 187 (252)
T 2gb4_A 134 SISLYC--CSIFDLPRAN----IGKFDRIWDRGALVAINPG---DHDRYADIILSLLRKEFQY 187 (252)
T ss_dssp SEEEEE--SCTTTGGGGC----CCCEEEEEESSSTTTSCGG---GHHHHHHHHHHTEEEEEEE
T ss_pred ceEEEE--CccccCCccc----CCCEEEEEEhhhhhhCCHH---HHHHHHHHHHHHcCCCeEE
Confidence 344432 3344443321 1334344455567887542 345677666 568997444
No 142
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=41.67 E-value=1.6e+02 Score=27.49 Aligned_cols=47 Identities=17% Similarity=0.062 Sum_probs=29.7
Q ss_pred CCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHH
Q 037028 239 GESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELK 298 (503)
Q Consensus 239 g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~ 298 (503)
..+.-+|+|+|.|. | |-+++ ++ ..+ --+||||+.+...++.+.+++.
T Consensus 53 ~~~g~~vLDiGCG~----G--~~~~~--~~-~~~----~~~v~g~D~s~~~l~~a~~~~~ 99 (263)
T 2a14_A 53 GLQGDTLIDIGSGP----T--IYQVL--AA-CDS----FQDITLSDFTDRNREELEKWLK 99 (263)
T ss_dssp SCCEEEEEESSCTT----C--CGGGT--TG-GGT----EEEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCceEEEeCCCc----c--HHHHH--HH-Hhh----hcceeeccccHHHHHHHHHHHh
Confidence 34667899999642 2 32222 22 221 2379999999888887777653
No 143
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=41.64 E-value=32 Score=31.56 Aligned_cols=105 Identities=14% Similarity=0.087 Sum_probs=54.7
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccC
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQ 321 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~ 321 (503)
.-.|+|+|.+. | .+...|+.+ ++ ++|||+.+...++.+.+++ .. -..+|.. .++.++.
T Consensus 57 ~~~vLD~GcG~----G----~~~~~la~~--~~----~v~gvD~s~~~~~~a~~~~----~~--~~~~~~~--~d~~~~~ 114 (245)
T 3ggd_A 57 ELPLIDFACGN----G----TQTKFLSQF--FP----RVIGLDVSKSALEIAAKEN----TA--ANISYRL--LDGLVPE 114 (245)
T ss_dssp TSCEEEETCTT----S----HHHHHHHHH--SS----CEEEEESCHHHHHHHHHHS----CC--TTEEEEE--CCTTCHH
T ss_pred CCeEEEEcCCC----C----HHHHHHHHh--CC----CEEEEECCHHHHHHHHHhC----cc--cCceEEE--Ccccccc
Confidence 34699999643 2 244445554 22 7999998876676665544 11 1344433 2333322
Q ss_pred ccc-ccc-cCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcE-EEEEeec
Q 037028 322 AKD-INV-EDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKV-VMLVEQD 373 (503)
Q Consensus 322 ~~~-l~~-~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkv-vvlvE~e 373 (503)
... +.. ..-.+ |.+...+||+..+ ....+|+.+ +.|+|.- ++++|..
T Consensus 115 ~~~~~~~~~~~d~--v~~~~~~~~~~~~---~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 115 QAAQIHSEIGDAN--IYMRTGFHHIPVE---KRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp HHHHHHHHHCSCE--EEEESSSTTSCGG---GHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cccccccccCccE--EEEcchhhcCCHH---HHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 110 100 01223 4444556887542 234566655 5689964 5666654
No 144
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=41.52 E-value=1.5e+02 Score=26.44 Aligned_cols=106 Identities=16% Similarity=0.183 Sum_probs=57.2
Q ss_pred eEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC---cEEEeeecccccc
Q 037028 243 VHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL---NFEFLAVEKSLET 319 (503)
Q Consensus 243 VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi---pFeF~~v~~~le~ 319 (503)
-.|+|+|.|.| ..+ +. ++.+ + .-++|||+.+...++.+.+++ +..|+ ..+|.. .+..+
T Consensus 55 ~~vLDlGcGtG------~~~-~~-~~~~-~----~~~v~gvD~s~~~l~~a~~~~----~~~~~~~~~v~~~~--~d~~~ 115 (201)
T 2ift_A 55 SECLDGFAGSG------SLG-FE-ALSR-Q----AKKVTFLELDKTVANQLKKNL----QTLKCSSEQAEVIN--QSSLD 115 (201)
T ss_dssp CEEEETTCTTC------HHH-HH-HHHT-T----CSEEEEECSCHHHHHHHHHHH----HHTTCCTTTEEEEC--SCHHH
T ss_pred CeEEEcCCccC------HHH-HH-HHHc-c----CCEEEEEECCHHHHHHHHHHH----HHhCCCccceEEEE--CCHHH
Confidence 37999996533 222 22 3333 2 148999999887777776665 34555 355542 23322
Q ss_pred cCcccccccC-CcEEEEEeccccccccccccchHHHHHHHHHh---cCCcEEEEEeecCCC
Q 037028 320 LQAKDINVED-GEVLVMNSILELHCVVKESRGALNSVLQRLHQ---LSPKVVMLVEQDSSH 376 (503)
Q Consensus 320 l~~~~l~~~~-~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~---L~PkvvvlvE~ea~~ 376 (503)
+.+. +.-.. =++|+.|..+ | . +....+|+.+.. |+|.-+++++.....
T Consensus 116 ~~~~-~~~~~~fD~I~~~~~~--~--~----~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 116 FLKQ-PQNQPHFDVVFLDPPF--H--F----NLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp HTTS-CCSSCCEEEEEECCCS--S--S----CHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred HHHh-hccCCCCCEEEECCCC--C--C----ccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 2111 00011 1355655553 3 1 234567877755 999877776655443
No 145
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=41.36 E-value=90 Score=27.14 Aligned_cols=34 Identities=24% Similarity=0.357 Sum_probs=23.3
Q ss_pred EEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHH
Q 037028 244 HVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGE 292 (503)
Q Consensus 244 HIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~ 292 (503)
.|+|+|.|- | .+...|+.+. ++|||+.+...++.
T Consensus 26 ~vLD~GcG~----G----~~~~~l~~~~-------~v~gvD~s~~~~~~ 59 (170)
T 3q87_B 26 IVLDLGTST----G----VITEQLRKRN-------TVVSTDLNIRALES 59 (170)
T ss_dssp EEEEETCTT----C----HHHHHHTTTS-------EEEEEESCHHHHHT
T ss_pred eEEEeccCc----c----HHHHHHHhcC-------cEEEEECCHHHHhc
Confidence 899999753 3 3455566542 99999988655544
No 146
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=40.47 E-value=73 Score=30.02 Aligned_cols=117 Identities=13% Similarity=0.084 Sum_probs=58.5
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--EEEeeeccccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--FEFLAVEKSLE 318 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--FeF~~v~~~le 318 (503)
..-+|+|+|.+- |. +...|+.+. | ..+||||+.....++.+.+++...+. .|+. ++|. ..++.
T Consensus 36 ~~~~VLDlG~G~----G~----~~l~la~~~---~-~~~v~gvDi~~~~~~~a~~n~~~~~~-~~l~~~v~~~--~~D~~ 100 (260)
T 2ozv_A 36 RACRIADLGAGA----GA----AGMAVAARL---E-KAEVTLYERSQEMAEFARRSLELPDN-AAFSARIEVL--EADVT 100 (260)
T ss_dssp SCEEEEECCSSS----SH----HHHHHHHHC---T-TEEEEEEESSHHHHHHHHHHTTSGGG-TTTGGGEEEE--ECCTT
T ss_pred CCCEEEEeCChH----hH----HHHHHHHhC---C-CCeEEEEECCHHHHHHHHHHHHhhhh-CCCcceEEEE--eCCHH
Confidence 456899999753 32 233455542 3 48999999887777666655432111 4554 4443 33443
Q ss_pred ccCcc----cccccCCcEEEEEecccccc-cc----------ccccchHHHHHHHH-HhcCCcEEEEEee
Q 037028 319 TLQAK----DINVEDGEVLVMNSILELHC-VV----------KESRGALNSVLQRL-HQLSPKVVMLVEQ 372 (503)
Q Consensus 319 ~l~~~----~l~~~~~EaLaVN~~~~Lh~-l~----------~es~~~~~~~L~~I-r~L~PkvvvlvE~ 372 (503)
++.+. .+.-..=+.|+.|-.+.... .. .+.......+++.+ +-|+|.-.+++..
T Consensus 101 ~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 101 LRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp CCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 33110 11111225677775553220 00 00111245677665 5689986665544
No 147
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=40.26 E-value=1.9e+02 Score=26.24 Aligned_cols=46 Identities=15% Similarity=0.006 Sum_probs=29.1
Q ss_pred CCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHH
Q 037028 239 GESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDEL 297 (503)
Q Consensus 239 g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL 297 (503)
..+.-.|+|+|.|. | +.++ .|+.+ + ..++|||+.+...++.+.+++
T Consensus 54 ~~~~~~vLDlGcG~----G--~~~~--~l~~~--~---~~~v~gvD~s~~~l~~a~~~~ 99 (265)
T 2i62_A 54 AVKGELLIDIGSGP----T--IYQL--LSACE--S---FTEIIVSDYTDQNLWELQKWL 99 (265)
T ss_dssp SCCEEEEEEESCTT----C--CGGG--TTGGG--T---EEEEEEEESCHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCc----c--HHHH--HHhhc--c---cCeEEEecCCHHHHHHHHHHH
Confidence 35567899999653 2 2221 23332 1 158999999877777776665
No 148
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=40.13 E-value=2e+02 Score=25.58 Aligned_cols=113 Identities=15% Similarity=0.145 Sum_probs=58.2
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC-cEEEeeeccccccc
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL-NFEFLAVEKSLETL 320 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi-pFeF~~v~~~le~l 320 (503)
.-.|+|+|.|. | .+...|+.+. | ..++|||+.+...++.+.+++.. .|+ .++|.. .++.++
T Consensus 42 ~~~vLDiGcG~----G----~~~~~la~~~---p-~~~v~gvD~s~~~l~~a~~~~~~----~~~~~v~~~~--~d~~~~ 103 (214)
T 1yzh_A 42 NPIHVEVGSGK----G----AFVSGMAKQN---P-DINYIGIDIQKSVLSYALDKVLE----VGVPNIKLLW--VDGSDL 103 (214)
T ss_dssp CCEEEEESCTT----S----HHHHHHHHHC---T-TSEEEEEESCHHHHHHHHHHHHH----HCCSSEEEEE--CCSSCG
T ss_pred CCeEEEEccCc----C----HHHHHHHHHC---C-CCCEEEEEcCHHHHHHHHHHHHH----cCCCCEEEEe--CCHHHH
Confidence 34699999753 3 2333455542 3 47999999887777766665533 344 344432 233332
Q ss_pred CcccccccCCcEEEEEecccccccccccc-chHHHHHHHHH-hcCCcEEEEEeec
Q 037028 321 QAKDINVEDGEVLVMNSILELHCVVKESR-GALNSVLQRLH-QLSPKVVMLVEQD 373 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~Lh~l~~es~-~~~~~~L~~Ir-~L~PkvvvlvE~e 373 (503)
.. .+.-..=+.|++|..........+.+ .....+|+.+. .|+|.-+++++.+
T Consensus 104 ~~-~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 104 TD-YFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp GG-TSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred Hh-hcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 21 11111225677775432111000000 01246777765 5899877776554
No 149
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=39.59 E-value=2.1e+02 Score=29.46 Aligned_cols=95 Identities=17% Similarity=0.276 Sum_probs=56.7
Q ss_pred eEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccCc
Q 037028 243 VHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQA 322 (503)
Q Consensus 243 VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~~ 322 (503)
-.|+|+|-+.| .+...||.+ + -+++||+.+.+.++.+.+++ +..|++.+|.. .+.+++.+
T Consensus 292 ~~VLDlgcG~G--------~~sl~la~~-~-----~~V~gvD~s~~ai~~A~~n~----~~ngl~v~~~~--~d~~~~~~ 351 (425)
T 2jjq_A 292 EKILDMYSGVG--------TFGIYLAKR-G-----FNVKGFDSNEFAIEMARRNV----EINNVDAEFEV--ASDREVSV 351 (425)
T ss_dssp SEEEEETCTTT--------HHHHHHHHT-T-----CEEEEEESCHHHHHHHHHHH----HHHTCCEEEEE--CCTTTCCC
T ss_pred CEEEEeeccch--------HHHHHHHHc-C-----CEEEEEECCHHHHHHHHHHH----HHcCCcEEEEE--CChHHcCc
Confidence 37899996432 233345654 1 38999998887777766654 34466555543 34443322
Q ss_pred ccccccCCcEEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEe
Q 037028 323 KDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLVE 371 (503)
Q Consensus 323 ~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~PkvvvlvE 371 (503)
. .=++|++|-.. .+....+++.++.|+|+-++.+.
T Consensus 352 ~-----~fD~Vv~dPPr---------~g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 352 K-----GFDTVIVDPPR---------AGLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp T-----TCSEEEECCCT---------TCSCHHHHHHHHHHCCSEEEEEE
T ss_pred c-----CCCEEEEcCCc---------cchHHHHHHHHHhcCCCcEEEEE
Confidence 2 22466665431 01224688889999998777764
No 150
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=39.02 E-value=2.2e+02 Score=26.94 Aligned_cols=100 Identities=16% Similarity=0.120 Sum_probs=53.1
Q ss_pred EEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccCcc
Q 037028 244 HVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQAK 323 (503)
Q Consensus 244 HIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~~~ 323 (503)
.|+|+|.|- | + +...|+.+ + -++|||+.+...++ .|+.. -.++|.. .+.+++
T Consensus 42 ~vLDvGcGt----G-~---~~~~l~~~-~-----~~v~gvD~s~~ml~--------~a~~~-~~v~~~~--~~~e~~--- 93 (257)
T 4hg2_A 42 DALDCGCGS----G-Q---ASLGLAEF-F-----ERVHAVDPGEAQIR--------QALRH-PRVTYAV--APAEDT--- 93 (257)
T ss_dssp EEEEESCTT----T-T---THHHHHTT-C-----SEEEEEESCHHHHH--------TCCCC-TTEEEEE--CCTTCC---
T ss_pred CEEEEcCCC----C-H---HHHHHHHh-C-----CEEEEEeCcHHhhh--------hhhhc-CCceeeh--hhhhhh---
Confidence 589999753 3 3 34456654 2 37999998764443 33332 1234432 234433
Q ss_pred cccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEE-EEEeecCCCCCC
Q 037028 324 DINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVV-MLVEQDSSHNGP 379 (503)
Q Consensus 324 ~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvv-vlvE~ea~~ns~ 379 (503)
.+.++.+=+|-|...||++-. +.+|+.+ |-|+|.-+ +++........|
T Consensus 94 --~~~~~sfD~v~~~~~~h~~~~------~~~~~e~~rvLkpgG~l~~~~~~~~~~~~ 143 (257)
T 4hg2_A 94 --GLPPASVDVAIAAQAMHWFDL------DRFWAELRRVARPGAVFAAVTYGLTRVDP 143 (257)
T ss_dssp --CCCSSCEEEEEECSCCTTCCH------HHHHHHHHHHEEEEEEEEEEEECCCBCCH
T ss_pred --cccCCcccEEEEeeehhHhhH------HHHHHHHHHHcCCCCEEEEEECCCCCCCH
Confidence 334454445555667787632 2455444 66899754 444544333333
No 151
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=38.56 E-value=1.4e+02 Score=28.99 Aligned_cols=135 Identities=13% Similarity=0.085 Sum_probs=69.9
Q ss_pred eEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhC-CCcEEEeeecccccc-c
Q 037028 243 VHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGL-KLNFEFLAVEKSLET-L 320 (503)
Q Consensus 243 VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~l-gipFeF~~v~~~le~-l 320 (503)
-+|+|+|.+.| .+...|+.+. | .-+||+|+.+...++.+.+++...+..+ +-.+++.. .+..+ +
T Consensus 97 ~~VLdiG~G~G--------~~~~~l~~~~---~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~--~Da~~~l 162 (304)
T 2o07_A 97 RKVLIIGGGDG--------GVLREVVKHP---S-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV--GDGFEFM 162 (304)
T ss_dssp CEEEEEECTTS--------HHHHHHTTCT---T-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE--SCHHHHH
T ss_pred CEEEEECCCch--------HHHHHHHHcC---C-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE--CcHHHHH
Confidence 47999997533 2445566552 3 4799999998888877777776654443 22344432 22111 1
Q ss_pred CcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEeecCCCCCCchHHHHHHHHHHHHHHHhhh
Q 037028 321 QAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSL 399 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE~ea~~ns~~F~~RF~eAL~yYsAlFDSL 399 (503)
... -..=++|++++..... .... -....+++.+ +.|+|.-+++++.......+ +.+.+...+...+|...
T Consensus 163 ~~~---~~~fD~Ii~d~~~~~~--~~~~-l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~---~~~~~~~~~l~~~f~~v 233 (304)
T 2o07_A 163 KQN---QDAFDVIITDSSDPMG--PAES-LFKESYYQLMKTALKEDGVLCCQGECQWLHL---DLIKEMRQFCQSLFPVV 233 (304)
T ss_dssp HTC---SSCEEEEEEECC--------------CHHHHHHHHHEEEEEEEEEEEECTTTCH---HHHHHHHHHHHHHCSEE
T ss_pred hhC---CCCceEEEECCCCCCC--cchh-hhHHHHHHHHHhccCCCeEEEEecCCcccch---HHHHHHHHHHHHhCCCc
Confidence 110 0112567776653221 1100 0013466665 67899988888765433222 22333444555666544
Q ss_pred h
Q 037028 400 D 400 (503)
Q Consensus 400 d 400 (503)
.
T Consensus 234 ~ 234 (304)
T 2o07_A 234 A 234 (304)
T ss_dssp E
T ss_pred e
Confidence 3
No 152
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=37.26 E-value=1.7e+02 Score=26.86 Aligned_cols=48 Identities=23% Similarity=0.284 Sum_probs=32.4
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHH
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRY 300 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~f 300 (503)
+.-.|+|+|.|.| .+...|+.+. | ..++|||+.+...++.+.+++...
T Consensus 49 ~~~~vLDiGcG~G--------~~~~~la~~~---~-~~~v~gvD~s~~~l~~a~~~~~~~ 96 (246)
T 2vdv_E 49 KKVTIADIGCGFG--------GLMIDLSPAF---P-EDLILGMEIRVQVTNYVEDRIIAL 96 (246)
T ss_dssp CCEEEEEETCTTS--------HHHHHHHHHS---T-TSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCC--------HHHHHHHHhC---C-CCCEEEEEcCHHHHHHHHHHHHHH
Confidence 4568999997543 2333455442 3 479999999887787777766554
No 153
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=35.70 E-value=1.9e+02 Score=27.94 Aligned_cols=109 Identities=12% Similarity=0.020 Sum_probs=58.5
Q ss_pred hHHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc-E
Q 037028 230 NASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN-F 308 (503)
Q Consensus 230 NqAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip-F 308 (503)
-..+++.+.-...-+|+|+|.|. | .+...|+.+ +++ ..++|||+.+.+.++.+.+++ +..|++ .
T Consensus 64 ~~~l~~~l~~~~~~~VLDiGcG~----G----~~~~~la~~--~~~-~~~v~gvD~s~~~~~~a~~~~----~~~g~~~v 128 (317)
T 1dl5_A 64 MALFMEWVGLDKGMRVLEIGGGT----G----YNAAVMSRV--VGE-KGLVVSVEYSRKICEIAKRNV----ERLGIENV 128 (317)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTT----S----HHHHHHHHH--HCT-TCEEEEEESCHHHHHHHHHHH----HHTTCCSE
T ss_pred HHHHHHhcCCCCcCEEEEecCCc----h----HHHHHHHHh--cCC-CCEEEEEECCHHHHHHHHHHH----HHcCCCCe
Confidence 34555666545556899999642 2 344555554 222 368999998877776666554 344543 4
Q ss_pred EEeeecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEE
Q 037028 309 EFLAVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLV 370 (503)
Q Consensus 309 eF~~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~Pkvvvlv 370 (503)
+|.. .+..+..+.. .+=++|+++.+ +|++.+ ...+.|+|.-++++
T Consensus 129 ~~~~--~d~~~~~~~~---~~fD~Iv~~~~--~~~~~~----------~~~~~LkpgG~lvi 173 (317)
T 1dl5_A 129 IFVC--GDGYYGVPEF---SPYDVIFVTVG--VDEVPE----------TWFTQLKEGGRVIV 173 (317)
T ss_dssp EEEE--SCGGGCCGGG---CCEEEEEECSB--BSCCCH----------HHHHHEEEEEEEEE
T ss_pred EEEE--CChhhccccC---CCeEEEEEcCC--HHHHHH----------HHHHhcCCCcEEEE
Confidence 4432 2333221110 11134554443 466642 23457888755444
No 154
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=34.48 E-value=1.3e+02 Score=27.02 Aligned_cols=104 Identities=12% Similarity=0.089 Sum_probs=54.1
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEe
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFL 311 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~ 311 (503)
.|++.+.-...-+|+|+|.|. |. +...|+.+. -++|+|+.+...++.+.+++ +..| ..+|.
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~----G~----~~~~l~~~~------~~v~~vD~~~~~~~~a~~~~----~~~~-~v~~~ 121 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGI----GY----YTALIAEIV------DKVVSVEINEKMYNYASKLL----SYYN-NIKLI 121 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTT----SH----HHHHHHHHS------SEEEEEESCHHHHHHHHHHH----TTCS-SEEEE
T ss_pred HHHHhcCCCCCCEEEEEcCCC----CH----HHHHHHHHc------CEEEEEeCCHHHHHHHHHHH----hhcC-CeEEE
Confidence 444555444455899999653 32 333444431 48999998876676665554 3344 44443
Q ss_pred eecccccccCcccccccCCcEEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEe
Q 037028 312 AVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLVE 371 (503)
Q Consensus 312 ~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~PkvvvlvE 371 (503)
. .+..+.-+. -..=+.|+++ ..+|++.+ ...+.|+|.-.+++.
T Consensus 122 ~--~d~~~~~~~---~~~fD~v~~~--~~~~~~~~----------~~~~~L~pgG~l~~~ 164 (231)
T 1vbf_A 122 L--GDGTLGYEE---EKPYDRVVVW--ATAPTLLC----------KPYEQLKEGGIMILP 164 (231)
T ss_dssp E--SCGGGCCGG---GCCEEEEEES--SBBSSCCH----------HHHHTEEEEEEEEEE
T ss_pred E--CCccccccc---CCCccEEEEC--CcHHHHHH----------HHHHHcCCCcEEEEE
Confidence 2 233221110 0111344443 44577653 245678897544443
No 155
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=34.43 E-value=1.7e+02 Score=28.23 Aligned_cols=135 Identities=16% Similarity=0.132 Sum_probs=69.8
Q ss_pred eEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCC-CcEEEeeecccccccC
Q 037028 243 VHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLK-LNFEFLAVEKSLETLQ 321 (503)
Q Consensus 243 VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lg-ipFeF~~v~~~le~l~ 321 (503)
-+|+|+|.|.| .+...|+.+. | .-+||+|+.+...++.+.+++.+++..++ -.+++.. .+..+.-
T Consensus 92 ~~VLdiG~G~G--------~~~~~l~~~~---~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~--~D~~~~l 157 (296)
T 1inl_A 92 KKVLIIGGGDG--------GTLREVLKHD---S-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI--ANGAEYV 157 (296)
T ss_dssp CEEEEEECTTC--------HHHHHHTTST---T-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE--SCHHHHG
T ss_pred CEEEEEcCCcC--------HHHHHHHhcC---C-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE--CcHHHHH
Confidence 57999997543 2455566553 3 47999999988888877777766554442 2344432 2221110
Q ss_pred cccccccCCcEEEEEeccc-cccccccccchHHHHHHHH-HhcCCcEEEEEeecCCCCCCch-HHHHHHHHHHHHHHHhh
Q 037028 322 AKDINVEDGEVLVMNSILE-LHCVVKESRGALNSVLQRL-HQLSPKVVMLVEQDSSHNGPFF-LGRFMEALHYYSAIFDS 398 (503)
Q Consensus 322 ~~~l~~~~~EaLaVN~~~~-Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE~ea~~ns~~F-~~RF~eAL~yYsAlFDS 398 (503)
+. .-..=++|++|.... .+. ... -....+++.+ +.|+|.-+++++.. ++.+ ...+.+.+......|..
T Consensus 158 ~~--~~~~fD~Ii~d~~~~~~~~--~~~-l~~~~~l~~~~~~LkpgG~lv~~~~----~~~~~~~~~~~~~~~l~~~F~~ 228 (296)
T 1inl_A 158 RK--FKNEFDVIIIDSTDPTAGQ--GGH-LFTEEFYQACYDALKEDGVFSAETE----DPFYDIGWFKLAYRRISKVFPI 228 (296)
T ss_dssp GG--CSSCEEEEEEEC-------------CCSHHHHHHHHHHEEEEEEEEEECC----CTTTTHHHHHHHHHHHHHHCSE
T ss_pred hh--CCCCceEEEEcCCCcccCc--hhh-hhHHHHHHHHHHhcCCCcEEEEEcc----CcccCHHHHHHHHHHHHHHCCc
Confidence 00 001125666665421 110 000 0013566665 67899987777633 2222 34555555555566654
Q ss_pred hh
Q 037028 399 LD 400 (503)
Q Consensus 399 Ld 400 (503)
..
T Consensus 229 v~ 230 (296)
T 1inl_A 229 TR 230 (296)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 156
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=34.16 E-value=74 Score=30.94 Aligned_cols=90 Identities=17% Similarity=0.183 Sum_probs=48.9
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEe
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFL 311 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~ 311 (503)
.|++++.-...-+|+|+|-|.| . |-..|+.+. ++...++|||+.+.+.++...++ + .-.++|
T Consensus 33 ~iv~~~~~~~~~~VLEIG~G~G----~----lt~~La~~~--~~~~~~V~avDid~~~l~~a~~~---~----~~~v~~- 94 (279)
T 3uzu_A 33 AIVAAIRPERGERMVEIGPGLG----A----LTGPVIARL--ATPGSPLHAVELDRDLIGRLEQR---F----GELLEL- 94 (279)
T ss_dssp HHHHHHCCCTTCEEEEECCTTS----T----THHHHHHHH--CBTTBCEEEEECCHHHHHHHHHH---H----GGGEEE-
T ss_pred HHHHhcCCCCcCEEEEEccccH----H----HHHHHHHhC--CCcCCeEEEEECCHHHHHHHHHh---c----CCCcEE-
Confidence 3566665555668999997543 3 445555542 11026799999887666666555 1 223444
Q ss_pred eecccccccCcccccc-c--CCcEEEEEeccc
Q 037028 312 AVEKSLETLQAKDINV-E--DGEVLVMNSILE 340 (503)
Q Consensus 312 ~v~~~le~l~~~~l~~-~--~~EaLaVN~~~~ 340 (503)
+..+..+++...+.- . ..-.|+-|..+.
T Consensus 95 -i~~D~~~~~~~~~~~~~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 95 -HAGDALTFDFGSIARPGDEPSLRIIGNLPYN 125 (279)
T ss_dssp -EESCGGGCCGGGGSCSSSSCCEEEEEECCHH
T ss_pred -EECChhcCChhHhcccccCCceEEEEccCcc
Confidence 334455554443311 0 122466676654
No 157
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=34.14 E-value=1.9e+02 Score=26.67 Aligned_cols=102 Identities=6% Similarity=0.015 Sum_probs=52.7
Q ss_pred eEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--EEEeeeccccccc
Q 037028 243 VHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--FEFLAVEKSLETL 320 (503)
Q Consensus 243 VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--FeF~~v~~~le~l 320 (503)
-.|+|+|.+.| .- ...|+.+- || ..+||+|+.+...++.+.+++ +..|++ .+|..- +..+.
T Consensus 65 ~~VLdiG~G~G----~~----~~~la~~~--~~-~~~v~~vD~s~~~~~~a~~~~----~~~g~~~~v~~~~~--d~~~~ 127 (248)
T 3tfw_A 65 KRILEIGTLGG----YS----TIWMAREL--PA-DGQLLTLEADAHHAQVARENL----QLAGVDQRVTLREG--PALQS 127 (248)
T ss_dssp SEEEEECCTTS----HH----HHHHHTTS--CT-TCEEEEEECCHHHHHHHHHHH----HHTTCTTTEEEEES--CHHHH
T ss_pred CEEEEecCCch----HH----HHHHHHhC--CC-CCEEEEEECCHHHHHHHHHHH----HHcCCCCcEEEEEc--CHHHH
Confidence 47999997533 22 22344432 33 479999998877776665554 445654 555432 22111
Q ss_pred CcccccccCCcEEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEEe
Q 037028 321 QAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQR-LHQLSPKVVMLVE 371 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~-Ir~L~PkvvvlvE 371 (503)
-+..-....=+.|+++.. ......+|+. .+-|+|.-+++++
T Consensus 128 l~~~~~~~~fD~V~~d~~----------~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 128 LESLGECPAFDLIFIDAD----------KPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp HHTCCSCCCCSEEEECSC----------GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred HHhcCCCCCeEEEEECCc----------hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 110000012245555332 1122345544 4678998877774
No 158
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=33.53 E-value=1e+02 Score=29.02 Aligned_cols=102 Identities=17% Similarity=0.137 Sum_probs=53.8
Q ss_pred CceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc-EEEeeeccccc
Q 037028 240 ESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN-FEFLAVEKSLE 318 (503)
Q Consensus 240 ~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip-FeF~~v~~~le 318 (503)
...-+|+|+|.| ...+++.= |.+. | ..+||+|+.+...++.+.++. +.+|+. .+| +..+++
T Consensus 79 ~~~~~vLDiG~G------~G~~~i~l--a~~~---~-~~~v~~vD~s~~~~~~a~~~~----~~~~l~~v~~--~~~d~~ 140 (249)
T 3g89_A 79 QGPLRVLDLGTG------AGFPGLPL--KIVR---P-ELELVLVDATRKKVAFVERAI----EVLGLKGARA--LWGRAE 140 (249)
T ss_dssp CSSCEEEEETCT------TTTTHHHH--HHHC---T-TCEEEEEESCHHHHHHHHHHH----HHHTCSSEEE--EECCHH
T ss_pred CCCCEEEEEcCC------CCHHHHHH--HHHC---C-CCEEEEEECCHHHHHHHHHHH----HHhCCCceEE--EECcHH
Confidence 345589999964 33344432 2221 3 479999998877776555543 445664 444 334555
Q ss_pred ccCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 037028 319 TLQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLV 370 (503)
Q Consensus 319 ~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pkvvvlv 370 (503)
++......-..=++|+.+.. ...+.++..+ +-|+|.-.+++
T Consensus 141 ~~~~~~~~~~~fD~I~s~a~-----------~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 141 VLAREAGHREAYARAVARAV-----------APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp HHTTSTTTTTCEEEEEEESS-----------CCHHHHHHHHGGGEEEEEEEEE
T ss_pred HhhcccccCCCceEEEECCc-----------CCHHHHHHHHHHHcCCCeEEEE
Confidence 54432100011134443321 1235666655 56789765544
No 159
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=33.44 E-value=1e+02 Score=29.58 Aligned_cols=111 Identities=11% Similarity=0.106 Sum_probs=58.4
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhC-CCcEEEeeeccccccc
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGL-KLNFEFLAVEKSLETL 320 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~l-gipFeF~~v~~~le~l 320 (503)
.-+|+|+|.|.| .+...++.+ +| ..++|+|+.+...++...+++...+..+ +-.+++.. .+..+.
T Consensus 79 ~~~VLdiG~G~G--------~~~~~l~~~---~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~--~D~~~~ 144 (283)
T 2i7c_A 79 PKNVLVVGGGDG--------GIIRELCKY---KS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI--EDASKF 144 (283)
T ss_dssp CCEEEEEECTTS--------HHHHHHTTC---TT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE--SCHHHH
T ss_pred CCeEEEEeCCcC--------HHHHHHHHc---CC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEE--CChHHH
Confidence 358999997543 345556554 23 4799999988777776666554332222 12244432 222111
Q ss_pred CcccccccCCcEEEEEeccccccccccccchH--HHHHHHH-HhcCCcEEEEEeec
Q 037028 321 QAKDINVEDGEVLVMNSILELHCVVKESRGAL--NSVLQRL-HQLSPKVVMLVEQD 373 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~--~~~L~~I-r~L~PkvvvlvE~e 373 (503)
-+.. -..=++|++++....+ .. ..+ ..+++.+ +.|+|.-++++...
T Consensus 145 l~~~--~~~fD~Ii~d~~~~~~--~~---~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 145 LENV--TNTYDVIIVDSSDPIG--PA---ETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp HHHC--CSCEEEEEEECCCTTT--GG---GGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHhC--CCCceEEEEcCCCCCC--cc---hhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 0000 0112567776543221 11 111 4677766 56899877776544
No 160
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=33.42 E-value=61 Score=28.67 Aligned_cols=44 Identities=16% Similarity=0.063 Sum_probs=28.4
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHH
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDEL 297 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL 297 (503)
..-+|+|+|.|. |. +...|+.+ + .-++|||+.+...++.+.+++
T Consensus 51 ~~~~vlD~gcG~----G~----~~~~l~~~-~----~~~v~~vD~~~~~~~~a~~~~ 94 (200)
T 1ne2_A 51 GGRSVIDAGTGN----GI----LACGSYLL-G----AESVTAFDIDPDAIETAKRNC 94 (200)
T ss_dssp BTSEEEEETCTT----CH----HHHHHHHT-T----BSEEEEEESCHHHHHHHHHHC
T ss_pred CCCEEEEEeCCc----cH----HHHHHHHc-C----CCEEEEEECCHHHHHHHHHhc
Confidence 344799999653 32 44456654 1 248999998877776665554
No 161
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=33.11 E-value=1.5e+02 Score=29.01 Aligned_cols=113 Identities=18% Similarity=0.130 Sum_probs=58.3
Q ss_pred HHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc-EEEe
Q 037028 233 ILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN-FEFL 311 (503)
Q Consensus 233 ILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip-FeF~ 311 (503)
+++...-...-.|+|.|.|- | .+.-.++.+.+ | ..+|+|++.+...++.+.+++ +..|++ .+|.
T Consensus 195 l~~~~~~~~~~~vLD~gcGs----G----~~~ie~a~~~~--~-~~~v~g~Di~~~~i~~a~~n~----~~~g~~~i~~~ 259 (354)
T 3tma_A 195 LLRLADARPGMRVLDPFTGS----G----TIALEAASTLG--P-TSPVYAGDLDEKRLGLAREAA----LASGLSWIRFL 259 (354)
T ss_dssp HHHHTTCCTTCCEEESSCTT----S----HHHHHHHHHHC--T-TSCEEEEESCHHHHHHHHHHH----HHTTCTTCEEE
T ss_pred HHHHhCCCCCCEEEeCCCCc----C----HHHHHHHHhhC--C-CceEEEEECCHHHHHHHHHHH----HHcCCCceEEE
Confidence 33333334455799999753 3 23333343321 2 478999998887777666654 445654 4443
Q ss_pred eecccccccCcccccccCCcEEEEEecccccccccccc-chHHHHHHHHH-hcCCc
Q 037028 312 AVEKSLETLQAKDINVEDGEVLVMNSILELHCVVKESR-GALNSVLQRLH-QLSPK 365 (503)
Q Consensus 312 ~v~~~le~l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~-~~~~~~L~~Ir-~L~Pk 365 (503)
..+..++.... ..-++++.|-.+..+....... .....+++.++ .|+|.
T Consensus 260 --~~D~~~~~~~~---~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~Lkpg 310 (354)
T 3tma_A 260 --RADARHLPRFF---PEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPG 310 (354)
T ss_dssp --ECCGGGGGGTC---CCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTT
T ss_pred --eCChhhCcccc---CCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCC
Confidence 23344433211 1126888888875432111110 11145666664 56784
No 162
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=32.23 E-value=3.4e+02 Score=26.88 Aligned_cols=95 Identities=12% Similarity=0.048 Sum_probs=53.8
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC-cEEEeeecccccc-
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL-NFEFLAVEKSLET- 319 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi-pFeF~~v~~~le~- 319 (503)
.-.|+|+| +-| . +...|+.+ +| ..++|+|+.+...++.+.+++.+ .|+ ..+| +..++.+
T Consensus 173 ~~~VLDlG-G~G----~----~~~~la~~--~~--~~~v~~vDi~~~~l~~a~~~~~~----~g~~~v~~--~~~D~~~~ 233 (373)
T 2qm3_A 173 NKDIFVLG-DDD----L----TSIALMLS--GL--PKRIAVLDIDERLTKFIEKAANE----IGYEDIEI--FTFDLRKP 233 (373)
T ss_dssp TCEEEEES-CTT----C----HHHHHHHH--TC--CSEEEEECSCHHHHHHHHHHHHH----HTCCCEEE--ECCCTTSC
T ss_pred CCEEEEEC-CCC----H----HHHHHHHh--CC--CCEEEEEECCHHHHHHHHHHHHH----cCCCCEEE--EEChhhhh
Confidence 35799999 854 1 22334443 23 36999999887777777666544 355 3444 3334433
Q ss_pred cCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCc
Q 037028 320 LQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPK 365 (503)
Q Consensus 320 l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~Pk 365 (503)
+... +. ..=++|++|..+.... ...+|+.+ +.|+|.
T Consensus 234 l~~~-~~-~~fD~Vi~~~p~~~~~--------~~~~l~~~~~~Lkpg 270 (373)
T 2qm3_A 234 LPDY-AL-HKFDTFITDPPETLEA--------IRAFVGRGIATLKGP 270 (373)
T ss_dssp CCTT-TS-SCBSEEEECCCSSHHH--------HHHHHHHHHHTBCST
T ss_pred chhh-cc-CCccEEEECCCCchHH--------HHHHHHHHHHHcccC
Confidence 3210 00 1226888887664321 24566665 678994
No 163
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=32.11 E-value=2.7e+02 Score=24.70 Aligned_cols=99 Identities=12% Similarity=0.206 Sum_probs=53.5
Q ss_pred ceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeeccccccc
Q 037028 241 SLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETL 320 (503)
Q Consensus 241 ~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l 320 (503)
+.-.|+|+|.+. |. +...|+.+ ++ ++|||+.+...++.+.+++ -+ .+|.. .++.++
T Consensus 40 ~~~~vLdiG~G~----G~----~~~~l~~~--~~----~v~~~D~s~~~~~~a~~~~------~~--~~~~~--~d~~~~ 95 (239)
T 3bxo_A 40 EASSLLDVACGT----GT----HLEHFTKE--FG----DTAGLELSEDMLTHARKRL------PD--ATLHQ--GDMRDF 95 (239)
T ss_dssp TCCEEEEETCTT----SH----HHHHHHHH--HS----EEEEEESCHHHHHHHHHHC------TT--CEEEE--CCTTTC
T ss_pred CCCeEEEecccC----CH----HHHHHHHh--CC----cEEEEeCCHHHHHHHHHhC------CC--CEEEE--CCHHHc
Confidence 445899999753 32 33345544 11 8999998876666555442 12 33432 233332
Q ss_pred CcccccccCCcE-EEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 321 QAKDINVEDGEV-LVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 321 ~~~~l~~~~~Ea-LaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
. . ++.. +|+.+.-.+||+.+. .....+|+.+ +.|+|.-.++++
T Consensus 96 ~-----~-~~~~D~v~~~~~~~~~~~~~--~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 96 R-----L-GRKFSAVVSMFSSVGYLKTT--EELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp C-----C-SSCEEEEEECTTGGGGCCSH--HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred c-----c-CCCCcEEEEcCchHhhcCCH--HHHHHHHHHHHHhcCCCeEEEEE
Confidence 2 1 2222 334333367887532 2345666666 568998776665
No 164
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=32.06 E-value=88 Score=26.71 Aligned_cols=52 Identities=19% Similarity=0.222 Sum_probs=31.8
Q ss_pred HHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHH
Q 037028 233 ILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELK 298 (503)
Q Consensus 233 ILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~ 298 (503)
+++.+.-...-+|+|+|.+. | .+...|+.+. .++|+|+.+...++.+.+++.
T Consensus 25 ~~~~~~~~~~~~vldiG~G~----G----~~~~~l~~~~------~~v~~~D~~~~~~~~a~~~~~ 76 (192)
T 1l3i_A 25 IMCLAEPGKNDVAVDVGCGT----G----GVTLELAGRV------RRVYAIDRNPEAISTTEMNLQ 76 (192)
T ss_dssp HHHHHCCCTTCEEEEESCTT----S----HHHHHHHTTS------SEEEEEESCHHHHHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCC----C----HHHHHHHHhc------CEEEEEECCHHHHHHHHHHHH
Confidence 33334434455899999643 2 2333455432 589999988777766666554
No 165
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=29.96 E-value=3.4e+02 Score=26.24 Aligned_cols=134 Identities=12% Similarity=0.125 Sum_probs=68.5
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhh-CC-CcEEEeeecccccc
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADG-LK-LNFEFLAVEKSLET 319 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~-lg-ipFeF~~v~~~le~ 319 (503)
.-+|+|+|.|.| .+...|+.+ +| .-+||+|+.+...++...+++...... ++ -.++|.. .+..+
T Consensus 84 ~~~VLdiG~G~G--------~~~~~l~~~---~~-~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~--~D~~~ 149 (294)
T 3adn_A 84 AKHVLIIGGGDG--------AMLREVTRH---KN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVI--DDGVN 149 (294)
T ss_dssp CCEEEEESCTTC--------HHHHHHHTC---TT-CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEEC--SCSCC
T ss_pred CCEEEEEeCChh--------HHHHHHHhC---CC-CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEE--ChHHH
Confidence 348999997543 244556654 23 479999999888888887777665421 21 1233321 12111
Q ss_pred -cCcccccccCCcEEEEEeccccccccccccchH--HHHHHHH-HhcCCcEEEEEeecCCCCCCchHHHHHHHHHHHHHH
Q 037028 320 -LQAKDINVEDGEVLVMNSILELHCVVKESRGAL--NSVLQRL-HQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAI 395 (503)
Q Consensus 320 -l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~--~~~L~~I-r~L~PkvvvlvE~ea~~ns~~F~~RF~eAL~yYsAl 395 (503)
+... -..=++|++++.... ... ..+ ..|++.+ +.|+|.-++++..++-...+ +.+.+.+......
T Consensus 150 ~l~~~---~~~fDvIi~D~~~p~--~~~---~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~---~~~~~~~~~l~~~ 218 (294)
T 3adn_A 150 FVNQT---SQTFDVIISDCTDPI--GPG---ESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQ---EEAIDSHRKLSHY 218 (294)
T ss_dssp ---CC---CCCEEEEEECC---------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCC---HHHHHHHHHHHHH
T ss_pred HHhhc---CCCccEEEECCCCcc--Ccc---hhccHHHHHHHHHHhcCCCCEEEEecCCcccch---HHHHHHHHHHHHH
Confidence 1100 011246666654311 111 111 4567665 67899977777654322222 3455555555666
Q ss_pred Hhhhh
Q 037028 396 FDSLD 400 (503)
Q Consensus 396 FDSLd 400 (503)
|....
T Consensus 219 F~~v~ 223 (294)
T 3adn_A 219 FSDVG 223 (294)
T ss_dssp CSEEE
T ss_pred CCCeE
Confidence 76554
No 166
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=29.91 E-value=61 Score=28.42 Aligned_cols=53 Identities=19% Similarity=0.245 Sum_probs=26.1
Q ss_pred HHhhhcC-CceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHH
Q 037028 233 ILEAFEG-ESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDEL 297 (503)
Q Consensus 233 ILEA~~g-~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL 297 (503)
+++.+.. .+.-+|+|+|.|- |. +...|+.+. | ..++|||+.+...++.+.+++
T Consensus 21 ~~~~l~~~~~~~~vLDiG~G~----G~----~~~~l~~~~---~-~~~v~~vD~~~~~~~~a~~~~ 74 (215)
T 4dzr_A 21 AIRFLKRMPSGTRVIDVGTGS----GC----IAVSIALAC---P-GVSVTAVDLSMDALAVARRNA 74 (215)
T ss_dssp HHHHHTTCCTTEEEEEEESSB----CH----HHHHHHHHC---T-TEEEEEEECC-----------
T ss_pred HHHHhhhcCCCCEEEEecCCH----hH----HHHHHHHhC---C-CCeEEEEECCHHHHHHHHHHH
Confidence 3334443 5667999999753 32 333444442 3 489999998876666555544
No 167
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=29.85 E-value=2.3e+02 Score=27.37 Aligned_cols=112 Identities=9% Similarity=0.054 Sum_probs=58.9
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCC-CcEEEeeeccccccc
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLK-LNFEFLAVEKSLETL 320 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lg-ipFeF~~v~~~le~l 320 (503)
.-.|+|+|.|.| .+...|+.+ +| ..+||+|+.+...++...+++...++.++ -.++|.. .+..++
T Consensus 96 ~~~VLdiG~G~G--------~~~~~l~~~---~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~--~D~~~~ 161 (304)
T 3bwc_A 96 PERVLIIGGGDG--------GVLREVLRH---GT-VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV--GDGLAF 161 (304)
T ss_dssp CCEEEEEECTTS--------HHHHHHHTC---TT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE--SCHHHH
T ss_pred CCeEEEEcCCCC--------HHHHHHHhC---CC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE--CcHHHH
Confidence 357999997543 345556654 23 47999999988888777777765554432 2344432 222221
Q ss_pred CcccccccCCcEEEEEeccccccccccccchH--HHHHHHH-HhcCCcEEEEEeec
Q 037028 321 QAKDINVEDGEVLVMNSILELHCVVKESRGAL--NSVLQRL-HQLSPKVVMLVEQD 373 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~--~~~L~~I-r~L~PkvvvlvE~e 373 (503)
... ..-..=++|++|... +.... ..+ ..+++.+ +.|+|.-++++..+
T Consensus 162 ~~~-~~~~~fDvIi~d~~~--~~~~~---~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 162 VRQ-TPDNTYDVVIIDTTD--PAGPA---SKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp HHS-SCTTCEEEEEEECC--------------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHh-ccCCceeEEEECCCC--ccccc---hhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 100 000112567766544 22111 111 3566665 67899877666543
No 168
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=29.81 E-value=19 Score=37.22 Aligned_cols=26 Identities=27% Similarity=0.320 Sum_probs=20.1
Q ss_pred HhhhcCCceeEEeeeccccCCCCccchh
Q 037028 234 LEAFEGESLVHVVDLGMTLGLPHGRQWH 261 (503)
Q Consensus 234 LEA~~g~~~VHIVDfgi~~G~~~G~QWp 261 (503)
..+.+..+||=|||+|+..| .|+|+.
T Consensus 155 ~~l~~~~~RV~ivD~DvHHG--nGtq~i 180 (376)
T 4a69_A 155 LELLKYHPRVLYIDIDIHHG--DGVQEA 180 (376)
T ss_dssp HHHTTTCSCEEEEECSSSCC--HHHHHH
T ss_pred HHHHHhCCcEEEEeccCCCC--cchhhH
Confidence 34444468999999999876 899974
No 169
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=28.79 E-value=1.1e+02 Score=27.11 Aligned_cols=67 Identities=10% Similarity=0.046 Sum_probs=39.3
Q ss_pred hhhHHHHhhhc--CCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCC
Q 037028 228 VANASILEAFE--GESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLK 305 (503)
Q Consensus 228 tANqAILEA~~--g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lg 305 (503)
-..+.+++.+. -...-.|+|+|.+ .| .+...|+.+ | ..++|||+.+...++.+.+++ +..|
T Consensus 45 ~~~~~~~~~l~~~~~~~~~vLDiG~G----~G----~~~~~l~~~----~-~~~v~~vD~s~~~~~~a~~~~----~~~~ 107 (205)
T 3grz_A 45 QTTQLAMLGIERAMVKPLTVADVGTG----SG----ILAIAAHKL----G-AKSVLATDISDESMTAAEENA----ALNG 107 (205)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEEETCT----TS----HHHHHHHHT----T-CSEEEEEESCHHHHHHHHHHH----HHTT
T ss_pred ccHHHHHHHHHHhccCCCEEEEECCC----CC----HHHHHHHHC----C-CCEEEEEECCHHHHHHHHHHH----HHcC
Confidence 33444555554 2345689999964 33 233346654 2 359999998877776665554 3445
Q ss_pred Cc-EEEe
Q 037028 306 LN-FEFL 311 (503)
Q Consensus 306 ip-FeF~ 311 (503)
++ ++|.
T Consensus 108 ~~~v~~~ 114 (205)
T 3grz_A 108 IYDIALQ 114 (205)
T ss_dssp CCCCEEE
T ss_pred CCceEEE
Confidence 54 5554
No 170
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=28.43 E-value=1.9e+02 Score=26.12 Aligned_cols=101 Identities=17% Similarity=0.216 Sum_probs=51.7
Q ss_pred eEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--EEEeeeccccccc
Q 037028 243 VHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--FEFLAVEKSLETL 320 (503)
Q Consensus 243 VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--FeF~~v~~~le~l 320 (503)
-+|+|+|.+. |. +...|+.+- | ..++|+|+.+...++.+.+++. ..|+. ++|.. .+..+.
T Consensus 56 ~~vLdiG~G~----G~----~~~~la~~~---~-~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~v~~~~--~d~~~~ 117 (233)
T 2gpy_A 56 ARILEIGTAI----GY----SAIRMAQAL---P-EATIVSIERDERRYEEAHKHVK----ALGLESRIELLF--GDALQL 117 (233)
T ss_dssp SEEEEECCTT----SH----HHHHHHHHC---T-TCEEEEECCCHHHHHHHHHHHH----HTTCTTTEEEEC--SCGGGS
T ss_pred CEEEEecCCC----cH----HHHHHHHHC---C-CCEEEEEECCHHHHHHHHHHHH----HcCCCCcEEEEE--CCHHHH
Confidence 3799999653 32 223344432 2 3799999988777766666553 34542 45532 222221
Q ss_pred CcccccccCCcEEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEEe
Q 037028 321 QAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQR-LHQLSPKVVMLVE 371 (503)
Q Consensus 321 ~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~-Ir~L~PkvvvlvE 371 (503)
-+....-..=+.|+++... + ....+|+. .+.|+|.-+++++
T Consensus 118 ~~~~~~~~~fD~I~~~~~~--~--------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 118 GEKLELYPLFDVLFIDAAK--G--------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp HHHHTTSCCEEEEEEEGGG--S--------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHhcccCCCccEEEECCCH--H--------HHHHHHHHHHHHcCCCeEEEEE
Confidence 1100000111455554432 1 12344544 4678998777775
No 171
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=26.62 E-value=70 Score=30.00 Aligned_cols=52 Identities=15% Similarity=0.189 Sum_probs=32.8
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHH
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDEL 297 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL 297 (503)
.|++++.-...-+|+|+|-|.| .+...|+.+. -++|||+.+...++.+.+++
T Consensus 21 ~i~~~~~~~~~~~VLDiG~G~G--------~lt~~l~~~~------~~v~~vD~~~~~~~~a~~~~ 72 (244)
T 1qam_A 21 KIMTNIRLNEHDNIFEIGSGKG--------HFTLELVQRC------NFVTAIEIDHKLCKTTENKL 72 (244)
T ss_dssp HHHTTCCCCTTCEEEEECCTTS--------HHHHHHHHHS------SEEEEECSCHHHHHHHHHHT
T ss_pred HHHHhCCCCCCCEEEEEeCCch--------HHHHHHHHcC------CeEEEEECCHHHHHHHHHhh
Confidence 3444444344558999997543 3455666652 47999998876666555544
No 172
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A*
Probab=26.34 E-value=23 Score=36.69 Aligned_cols=26 Identities=23% Similarity=0.176 Sum_probs=20.4
Q ss_pred HhhhcCCceeEEeeeccccCCCCccchh
Q 037028 234 LEAFEGESLVHVVDLGMTLGLPHGRQWH 261 (503)
Q Consensus 234 LEA~~g~~~VHIVDfgi~~G~~~G~QWp 261 (503)
..+.++.+||=|||+|+..| .|+|+.
T Consensus 163 ~~l~~~~~RV~ivD~DvHHG--nGtq~i 188 (388)
T 3ew8_A 163 LRLRRKFERILYVDLDLHHG--DGVEDA 188 (388)
T ss_dssp HHHTTTCSCEEEEECSSSCC--HHHHHH
T ss_pred HHHHhcCCeEEEEecCCCCC--hhHHHH
Confidence 34445678999999999875 898875
No 173
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=25.49 E-value=3.6e+02 Score=24.07 Aligned_cols=41 Identities=12% Similarity=0.054 Sum_probs=28.0
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHH
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDE 296 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~r 296 (503)
.-+|+|+|.+. |. +...|+.+ + .++|||+.+...++.+.++
T Consensus 49 ~~~vLDiGcG~----G~----~~~~l~~~-~-----~~v~~vD~s~~~~~~a~~~ 89 (226)
T 3m33_A 49 QTRVLEAGCGH----GP----DAARFGPQ-A-----ARWAAYDFSPELLKLARAN 89 (226)
T ss_dssp TCEEEEESCTT----SH----HHHHHGGG-S-----SEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEeCCCC----CH----HHHHHHHc-C-----CEEEEEECCHHHHHHHHHh
Confidence 34799999753 32 55566665 2 4899999887666665554
No 174
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens}
Probab=25.45 E-value=25 Score=36.19 Aligned_cols=26 Identities=23% Similarity=0.304 Sum_probs=19.8
Q ss_pred HhhhcCCceeEEeeeccccCCCCccchh
Q 037028 234 LEAFEGESLVHVVDLGMTLGLPHGRQWH 261 (503)
Q Consensus 234 LEA~~g~~~VHIVDfgi~~G~~~G~QWp 261 (503)
..+.+..+||=|||+|+..| .|+|+.
T Consensus 155 ~~l~~~~~RV~ivD~DvHHG--nGtq~i 180 (367)
T 3max_A 155 LELLKYHQRVLYIDIDIHHG--DGVEEA 180 (367)
T ss_dssp HHHTTTCSCEEEEECSSSCC--HHHHHH
T ss_pred HHHHHcCCcEEEEecCCCCC--chhhHH
Confidence 33444568999999999875 888864
No 175
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=25.31 E-value=1.2e+02 Score=28.87 Aligned_cols=131 Identities=11% Similarity=0.075 Sum_probs=64.7
Q ss_pred eEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhC--------CCcEEEeeec
Q 037028 243 VHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGL--------KLNFEFLAVE 314 (503)
Q Consensus 243 VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~l--------gipFeF~~v~ 314 (503)
-+|+|+|.|.| .+...++.+ | .-+||+|+.+...++.+.+++ +.+..+ +-.++|..
T Consensus 77 ~~VLdiG~G~G--------~~~~~l~~~----~-~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~-- 140 (281)
T 1mjf_A 77 KRVLVIGGGDG--------GTVREVLQH----D-VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTI-- 140 (281)
T ss_dssp CEEEEEECTTS--------HHHHHHTTS----C-CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEE--
T ss_pred CeEEEEcCCcC--------HHHHHHHhC----C-CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEE--
Confidence 47999997533 345556655 2 369999998887777776665 332111 12244432
Q ss_pred ccccc-cCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEeecCCCCCCchHHHHHHHHHHH
Q 037028 315 KSLET-LQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYY 392 (503)
Q Consensus 315 ~~le~-l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE~ea~~ns~~F~~RF~eAL~yY 392 (503)
.+..+ +.. -..=++|+++...... ..+.- ....+++.+ +.|+|.-++++....-... ...+.+.....
T Consensus 141 ~D~~~~l~~----~~~fD~Ii~d~~~~~~--~~~~l-~~~~~l~~~~~~L~pgG~lv~~~~~~~~~---~~~~~~~~~~l 210 (281)
T 1mjf_A 141 GDGFEFIKN----NRGFDVIIADSTDPVG--PAKVL-FSEEFYRYVYDALNNPGIYVTQAGSVYLF---TDELISAYKEM 210 (281)
T ss_dssp SCHHHHHHH----CCCEEEEEEECCCCC-------T-TSHHHHHHHHHHEEEEEEEEEEEEETTTS---HHHHHHHHHHH
T ss_pred CchHHHhcc----cCCeeEEEECCCCCCC--cchhh-hHHHHHHHHHHhcCCCcEEEEEcCCcccC---HHHHHHHHHHH
Confidence 22111 110 0112566666553211 10000 014566665 6689997777764432211 23333334444
Q ss_pred HHHHhhh
Q 037028 393 SAIFDSL 399 (503)
Q Consensus 393 sAlFDSL 399 (503)
..+|...
T Consensus 211 ~~~f~~v 217 (281)
T 1mjf_A 211 KKVFDRV 217 (281)
T ss_dssp HHHCSEE
T ss_pred HHHCCce
Confidence 4455543
No 176
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=25.17 E-value=1.6e+02 Score=26.70 Aligned_cols=101 Identities=12% Similarity=0.063 Sum_probs=49.4
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeecccccccC
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLETLQ 321 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le~l~ 321 (503)
.-+|+|+|.+. | .+...|+.+-+ | .-+++||+.+...++.. .+.|+.. -..+|.. .++++..
T Consensus 78 ~~~vLDlG~G~----G----~~~~~la~~~g--~-~~~v~gvD~s~~~i~~~----~~~a~~~-~~v~~~~--~d~~~~~ 139 (233)
T 2ipx_A 78 GAKVLYLGAAS----G----TTVSHVSDIVG--P-DGLVYAVEFSHRSGRDL----INLAKKR-TNIIPVI--EDARHPH 139 (233)
T ss_dssp TCEEEEECCTT----S----HHHHHHHHHHC--T-TCEEEEECCCHHHHHHH----HHHHHHC-TTEEEEC--SCTTCGG
T ss_pred CCEEEEEcccC----C----HHHHHHHHHhC--C-CcEEEEEECCHHHHHHH----HHHhhcc-CCeEEEE--cccCChh
Confidence 44799999753 3 23444555422 2 35899999876544333 3334432 2344432 2232211
Q ss_pred cccccccCC--cEEEEEeccccccccccccchHHHHHH-HHHhcCCcEEEEEe
Q 037028 322 AKDINVEDG--EVLVMNSILELHCVVKESRGALNSVLQ-RLHQLSPKVVMLVE 371 (503)
Q Consensus 322 ~~~l~~~~~--EaLaVN~~~~Lh~l~~es~~~~~~~L~-~Ir~L~PkvvvlvE 371 (503)
.+...++ ++|+.|.. .+.....++. ..+.|+|.-.++++
T Consensus 140 --~~~~~~~~~D~V~~~~~---------~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 140 --KYRMLIAMVDVIFADVA---------QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp --GGGGGCCCEEEEEECCC---------CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --hhcccCCcEEEEEEcCC---------CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 0111122 34444322 1122344554 77899998666664
No 177
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=24.89 E-value=1.9e+02 Score=30.06 Aligned_cols=118 Identities=16% Similarity=0.168 Sum_probs=60.0
Q ss_pred HHHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHH---HHHHHHHHhhCCC-
Q 037028 231 ASILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEI---GDELKRYADGLKL- 306 (503)
Q Consensus 231 qAILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~t---g~rL~~fA~~lgi- 306 (503)
..|++.+.-...-.|+|+|.| .|. +.-.||.+.+ ..+++||+.....++.+ -+.+.+-++.+|+
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCG----sG~----la~~LA~~~g----~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~ 299 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSG----VGN----CVVQAALECG----CALSFGCEIMDDASDLTILQYEELKKRCKLYGMR 299 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCT----TSH----HHHHHHHHHC----CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHhcCCCCCCEEEEeCCC----cCH----HHHHHHHHCC----CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC
Confidence 456666655555679999964 333 3333444322 25899999886655544 2333444556674
Q ss_pred --cEEEeeecccccccCcccc--cccCCcEEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEE
Q 037028 307 --NFEFLAVEKSLETLQAKDI--NVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLV 370 (503)
Q Consensus 307 --pFeF~~v~~~le~l~~~~l--~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~Pkvvvlv 370 (503)
.++|..- ..+.. ...+ ...+=++|++|..+ +. . .....+-...+.|+|.-.+++
T Consensus 300 ~~nV~~i~g-D~~~~--~~~~~~~~~~FDvIvvn~~l-~~---~---d~~~~L~el~r~LKpGG~lVi 357 (433)
T 1u2z_A 300 LNNVEFSLK-KSFVD--NNRVAELIPQCDVILVNNFL-FD---E---DLNKKVEKILQTAKVGCKIIS 357 (433)
T ss_dssp CCCEEEEES-SCSTT--CHHHHHHGGGCSEEEECCTT-CC---H---HHHHHHHHHHTTCCTTCEEEE
T ss_pred CCceEEEEc-Ccccc--ccccccccCCCCEEEEeCcc-cc---c---cHHHHHHHHHHhCCCCeEEEE
Confidence 3555321 11211 0001 01223577776544 11 1 111234455578999755555
No 178
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=24.78 E-value=86 Score=27.87 Aligned_cols=37 Identities=24% Similarity=0.275 Sum_probs=30.6
Q ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHhhccCCCCCc
Q 037028 130 KLVQQLIACAEAVACRDKAHASALLSELRVNALVFGTS 167 (503)
Q Consensus 130 ~L~~LLl~CAeAV~~gd~~~A~~lL~~L~~~as~~Gd~ 167 (503)
++=+-|-+|+++++.||.+.|+.||..-. ...|+||-
T Consensus 57 EIW~ALraA~~~~e~~Dl~tAQ~IldaAg-Itvp~gdL 93 (137)
T 2ksn_A 57 EIWDALKAAAHAFESNDHELAQAIIDGAN-ITLPHGAL 93 (137)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHS-CBCSSCCS
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHcC-CcccCCcH
Confidence 46688999999999999999999997655 45677873
No 179
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=24.41 E-value=2.4e+02 Score=25.59 Aligned_cols=101 Identities=5% Similarity=0.152 Sum_probs=52.9
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--EEEeeecccccc
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--FEFLAVEKSLET 319 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--FeF~~v~~~le~ 319 (503)
.-.|+|+|.+.| .. ...|+.. .| ..++|+|+.+...++.+.+++ +..|++ .+|.. .+..+
T Consensus 72 ~~~vLDiG~G~G------~~--~~~la~~---~~-~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~v~~~~--~d~~~ 133 (232)
T 3ntv_A 72 VKNILEIGTAIG------YS--SMQFASI---SD-DIHVTTIERNETMIQYAKQNL----ATYHFENQVRIIE--GNALE 133 (232)
T ss_dssp CCEEEEECCSSS------HH--HHHHHTT---CT-TCEEEEEECCHHHHHHHHHHH----HHTTCTTTEEEEE--SCGGG
T ss_pred CCEEEEEeCchh------HH--HHHHHHh---CC-CCEEEEEECCHHHHHHHHHHH----HHcCCCCcEEEEE--CCHHH
Confidence 347999997533 22 2234442 12 479999998877776666554 445553 55543 22222
Q ss_pred cCcccccccCCcEEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 037028 320 LQAKDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRL-HQLSPKVVMLVE 371 (503)
Q Consensus 320 l~~~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~I-r~L~PkvvvlvE 371 (503)
.-++.+ -..=+.|+++.. ......+|+.+ +.|+|.-+++++
T Consensus 134 ~~~~~~-~~~fD~V~~~~~----------~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 134 QFENVN-DKVYDMIFIDAA----------KAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp CHHHHT-TSCEEEEEEETT----------SSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHhhc-cCCccEEEEcCc----------HHHHHHHHHHHHHhcCCCeEEEEe
Confidence 111000 011134444321 12234566555 678999888774
No 180
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=23.71 E-value=3.2e+02 Score=25.40 Aligned_cols=57 Identities=16% Similarity=0.148 Sum_probs=34.5
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHH
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKR 299 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~ 299 (503)
.|++.+.-...-.|+|+|.+. | .+...|+.+-+ | ..++|+|+.+...++.+.+++..
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~----G----~~~~~la~~~~--~-~~~v~~vD~s~~~~~~a~~~~~~ 159 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGS----G----AMCAVLARAVG--S-SGKVFAYEKREEFAKLAESNLTK 159 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTT----S----HHHHHHHHHTT--T-TCEEEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCEEEEECCcC----C----HHHHHHHHHhC--C-CcEEEEEECCHHHHHHHHHHHHH
Confidence 455555444445899999753 3 23334554422 2 36999999887777766665543
No 181
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=22.93 E-value=2.9e+02 Score=25.98 Aligned_cols=95 Identities=13% Similarity=0.076 Sum_probs=50.4
Q ss_pred EEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCC-cEEEeeecccccccCc
Q 037028 244 HVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKL-NFEFLAVEKSLETLQA 322 (503)
Q Consensus 244 HIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgi-pFeF~~v~~~le~l~~ 322 (503)
.|+|+|-+.| . +-..||.+. + .-++|||+.....++.+.+++ +..|+ +.+| +..+.+++ +
T Consensus 122 ~VLDlgcG~G----~----~s~~la~~~--~--~~~V~~vD~s~~av~~a~~n~----~~n~l~~~~~--~~~d~~~~-~ 182 (272)
T 3a27_A 122 VVVDMFAGIG----Y----FTIPLAKYS--K--PKLVYAIEKNPTAYHYLCENI----KLNKLNNVIP--ILADNRDV-E 182 (272)
T ss_dssp EEEETTCTTT----T----THHHHHHHT--C--CSEEEEEECCHHHHHHHHHHH----HHTTCSSEEE--EESCGGGC-C
T ss_pred EEEEecCcCC----H----HHHHHHHhC--C--CCEEEEEeCCHHHHHHHHHHH----HHcCCCCEEE--EECChHHc-C
Confidence 6899996533 2 223344442 1 268999998877776665554 44555 3444 33344444 2
Q ss_pred ccccccCCcEEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEE
Q 037028 323 KDINVEDGEVLVMNSILELHCVVKESRGALNSVLQRLHQLSPKVVMLV 370 (503)
Q Consensus 323 ~~l~~~~~EaLaVN~~~~Lh~l~~es~~~~~~~L~~Ir~L~Pkvvvlv 370 (503)
. ...=+.+++|....+ ...+...++.|+|.-++++
T Consensus 183 ~---~~~~D~Vi~d~p~~~----------~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 183 L---KDVADRVIMGYVHKT----------HKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp C---TTCEEEEEECCCSSG----------GGGHHHHHHHEEEEEEEEE
T ss_pred c---cCCceEEEECCcccH----------HHHHHHHHHHcCCCCEEEE
Confidence 1 111246666544311 1233444678889755444
No 182
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=22.78 E-value=3.9e+02 Score=23.40 Aligned_cols=57 Identities=11% Similarity=0.107 Sum_probs=34.1
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHH
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKR 299 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~ 299 (503)
.+++.+.-...-+|+|+|.+ .|..-. .|+.+. + | .-++|+|+.+...++.+.+++.+
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G----~G~~~~----~l~~~~-~-~-~~~v~~vD~~~~~~~~a~~~~~~ 124 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTG----CGYHAA----VTAEIV-G-E-DGLVVSIERIPELAEKAERTLRK 124 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCT----TSHHHH----HHHHHH-C-T-TSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEECCC----ccHHHH----HHHHHh-C-C-CCEEEEEeCCHHHHHHHHHHHHH
Confidence 44555544455689999964 333222 233322 2 3 36999999887777776666544
No 183
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=22.62 E-value=1.2e+02 Score=23.81 Aligned_cols=35 Identities=23% Similarity=0.403 Sum_probs=22.6
Q ss_pred CcEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEee
Q 037028 276 KRLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLA 312 (503)
Q Consensus 276 ~~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~ 312 (503)
-.+|||||. ...-.+..+.-...|+.++|...|..
T Consensus 42 leiritgvp--eqvrkelakeaerlakefnitvtyti 76 (85)
T 2kl8_A 42 LEIRITGVP--EQVRKELAKEAERLAKEFNITVTYTI 76 (85)
T ss_dssp EEEEEESCC--HHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred eEEEEecCh--HHHHHHHHHHHHHHHHhcCeEEEEEE
Confidence 369999985 33334444555556788888877754
No 184
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=22.51 E-value=3.1e+02 Score=25.86 Aligned_cols=51 Identities=14% Similarity=0.091 Sum_probs=30.4
Q ss_pred EEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHHHhhCCCc--EEEe
Q 037028 244 HVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRYADGLKLN--FEFL 311 (503)
Q Consensus 244 HIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~fA~~lgip--FeF~ 311 (503)
.|+|+|.+- |. +-..+|.+ ++ . ++|||+.+...++.+.++ ++..|+. .+|.
T Consensus 128 ~VLDlgcG~----G~----~~~~la~~--~~--~-~V~~vD~s~~~~~~a~~n----~~~n~~~~~v~~~ 180 (278)
T 2frn_A 128 LVVDMFAGI----GH----LSLPIAVY--GK--A-KVIAIEKDPYTFKFLVEN----IHLNKVEDRMSAY 180 (278)
T ss_dssp EEEETTCTT----TT----THHHHHHH--TC--C-EEEEECCCHHHHHHHHHH----HHHTTCTTTEEEE
T ss_pred EEEEecccC----CH----HHHHHHHh--CC--C-EEEEEECCHHHHHHHHHH----HHHcCCCceEEEE
Confidence 689999653 31 22234433 22 3 899999887777666554 3445654 4453
No 185
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=21.80 E-value=84 Score=29.50 Aligned_cols=52 Identities=12% Similarity=0.191 Sum_probs=41.5
Q ss_pred hHHHHHHHHHhcCCcEEEEEeecCCCCCCchHHHHHHHHHHHHHHHhhhhcc
Q 037028 351 ALNSVLQRLHQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAM 402 (503)
Q Consensus 351 ~~~~~L~~Ir~L~PkvvvlvE~ea~~ns~~F~~RF~eAL~yYsAlFDSLda~ 402 (503)
....+++.+++.+.+..+.+|.+..........-+.+++.|...+++.|..|
T Consensus 239 d~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~~~s~~~l~~l~~~~~~~ 290 (290)
T 3tva_A 239 GMEAYLTTLWEIGYRGPLTIEREIPHDPVQQKKDLASALELLTGLRKKIANC 290 (290)
T ss_dssp CHHHHHHHHHHTTCCSCEEECCCCTTSHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHcCCCCcEEEEEecCCChhhHHHHHHHHHHHHHHHHHHhcCC
Confidence 4678999999999999899998865422246788999999999998887543
No 186
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=21.57 E-value=1.3e+02 Score=27.87 Aligned_cols=50 Identities=20% Similarity=0.283 Sum_probs=33.8
Q ss_pred CCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHH
Q 037028 239 GESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRY 300 (503)
Q Consensus 239 g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~f 300 (503)
..+...|+|+|.|.| .++..||.+. | ...++||+.+...++.+.+++.+.
T Consensus 44 ~~~~~~vLDiGcG~G--------~~~~~la~~~---p-~~~v~GiDis~~~l~~A~~~~~~l 93 (235)
T 3ckk_A 44 AQAQVEFADIGCGYG--------GLLVELSPLF---P-DTLILGLEIRVKVSDYVQDRIRAL 93 (235)
T ss_dssp --CCEEEEEETCTTC--------HHHHHHGGGS---T-TSEEEEEESCHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEccCCc--------HHHHHHHHHC---C-CCeEEEEECCHHHHHHHHHHHHHH
Confidence 445678999996533 2445567653 3 478999999888887777766543
No 187
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=21.20 E-value=1.9e+02 Score=25.97 Aligned_cols=53 Identities=15% Similarity=0.198 Sum_probs=31.6
Q ss_pred eeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHHH
Q 037028 242 LVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKRY 300 (503)
Q Consensus 242 ~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~f 300 (503)
.-+|+|+|.+ .|..=..|.+.+.. .+..| .-++|+|+.....++.+.+++.+.
T Consensus 85 ~~~VLdiG~G----~G~~~~~la~~~~~-~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~ 137 (227)
T 1r18_A 85 GARILDVGSG----SGYLTACFYRYIKA-KGVDA-DTRIVGIEHQAELVRRSKANLNTD 137 (227)
T ss_dssp TCEEEEESCT----TSHHHHHHHHHHHH-SCCCT-TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC----ccHHHHHHHHhccc-ccCCc-cCEEEEEEcCHHHHHHHHHHHHhc
Confidence 4489999964 33332223332221 12223 469999998887777777776553
No 188
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=21.08 E-value=3.8e+02 Score=23.91 Aligned_cols=54 Identities=17% Similarity=0.156 Sum_probs=33.6
Q ss_pred HHHhhhcCCceeEEeeeccccCCCCccchhhhHHHHhcCCCCCCCcEEEeeecCCchhHHHHHHHHHH
Q 037028 232 SILEAFEGESLVHVVDLGMTLGLPHGRQWHSLMQSLVNRSGKVPKRLKITGVGNCSERLGEIGDELKR 299 (503)
Q Consensus 232 AILEA~~g~~~VHIVDfgi~~G~~~G~QWpsLiqaLA~R~ggpP~~LRITgI~~~~~~l~~tg~rL~~ 299 (503)
.|++.+.-...-+|+|+|.+. | .+...|+.+ + .++++|+.+...++.+.+++.+
T Consensus 82 ~~~~~~~~~~~~~vldiG~G~----G----~~~~~l~~~-~-----~~v~~vD~~~~~~~~a~~~~~~ 135 (248)
T 2yvl_A 82 YIALKLNLNKEKRVLEFGTGS----G----ALLAVLSEV-A-----GEVWTFEAVEEFYKTAQKNLKK 135 (248)
T ss_dssp HHHHHTTCCTTCEEEEECCTT----S----HHHHHHHHH-S-----SEEEEECSCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEeCCCc----c----HHHHHHHHh-C-----CEEEEEecCHHHHHHHHHHHHH
Confidence 455555434445899999643 2 233445554 2 4899999887777766666543
No 189
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=20.96 E-value=95 Score=27.12 Aligned_cols=40 Identities=28% Similarity=0.409 Sum_probs=26.0
Q ss_pred cEEEeeecCCchhHHHHHHHHHHHHhhCCCcEEEeeeccccc
Q 037028 277 RLKITGVGNCSERLGEIGDELKRYADGLKLNFEFLAVEKSLE 318 (503)
Q Consensus 277 ~LRITgI~~~~~~l~~tg~rL~~fA~~lgipFeF~~v~~~le 318 (503)
.+|||||. ...-.+..+.-...++.++|..+|..+..++|
T Consensus 125 ~i~itgvp--eqvrkelakeaerl~~efni~v~y~imtgsle 164 (170)
T 4hhu_A 125 VIVITGVP--EQVRKELAKEAERLKAEFNINVQYQIMTGSLE 164 (170)
T ss_dssp EEEEESCC--HHHHHHHHHHHHHHHHHHTCEEEEEEEETTEE
T ss_pred EEEEeCCc--HHHHHHHHHHHHHHHHhcceEEEEEEEeccee
Confidence 68888884 23333444444445677899999988766665
No 190
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B}
Probab=20.65 E-value=35 Score=35.00 Aligned_cols=24 Identities=29% Similarity=0.217 Sum_probs=19.2
Q ss_pred hhcCCceeEEeeeccccCCCCccchh
Q 037028 236 AFEGESLVHVVDLGMTLGLPHGRQWH 261 (503)
Q Consensus 236 A~~g~~~VHIVDfgi~~G~~~G~QWp 261 (503)
+.+..+||=|||+|+..| .|+|+.
T Consensus 200 l~~~~~RV~ivD~DvHHG--nGtq~i 223 (362)
T 3men_A 200 LRARHARVAVLDTDMHHG--QGIQEI 223 (362)
T ss_dssp HTTTCSCEEEEECSSSCC--HHHHHH
T ss_pred HHHcCCeEEEEeCcCCCc--hhHhHH
Confidence 333469999999999876 899876
Done!