BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037040
(198 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q2L|A Chain A, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
pdb|2Q2L|B Chain B, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
Length = 152
Score = 174 bits (441), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 102/152 (67%), Gaps = 2/152 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGD 105
K VA + S G G + F QEGDGPTT+ G + L G HGFH+H GD + C STG
Sbjct: 2 AKGVAVLSSSEGVAGTILFTQEGDGPTTVTGNISGLKPGLHGFHVHALGDTTNGCMSTGP 61
Query: 106 HFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 165
HFNP K HG PED RHAGDLGNI VG DG A IVDK IPL GP+SIIGR+VV+H
Sbjct: 62 HFNPAGKEHGSPEDETRHAGDLGNITVGDDGTACFTIVDKQ--IPLTGPHSIIGRAVVVH 119
Query: 166 DKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQ 197
DDLGK G+ SK GNAG +IACG+IGLQ
Sbjct: 120 ADPDDLGKGGHELSKSTGNAGGRIACGIIGLQ 151
>pdb|1SRD|A Chain A, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|B Chain B, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|C Chain C, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|D Chain D, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
Length = 154
Score = 162 bits (410), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 102/152 (67%), Gaps = 2/152 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTG 104
T KAVA + +G++ QE DGPTT+ + L+ G HGFH+H +GD + C STG
Sbjct: 2 TKKAVAVLKGTSNVEGVVTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTG 61
Query: 105 DHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVI 164
HFNP +K HG PED +RHAGDLGNI DG A+ IVD IPL GPNS++GR++V+
Sbjct: 62 PHFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQ--IPLTGPNSVVGRALVV 119
Query: 165 HDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
H+ DDLGK G+ S GNAG ++ACGV+GL
Sbjct: 120 HELEDDLGKGGHELSPTTGNAGGRLACGVVGL 151
>pdb|3KM1|A Chain A, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM1|B Chain B, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|A Chain A, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|B Chain B, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|C Chain C, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|D Chain D, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|E Chain E, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|F Chain F, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|G Chain G, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|H Chain H, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|I Chain I, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|J Chain J, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|K Chain K, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|L Chain L, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|M Chain M, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|N Chain N, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|O Chain O, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|P Chain P, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|Q Chain Q, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|R Chain R, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|S Chain S, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|T Chain T, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|U Chain U, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|V Chain V, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|W Chain W, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|X Chain X, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|A Chain A, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|B Chain B, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|A Chain A, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|B Chain B, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3HOG|A Chain A, Metal-Free Tomato Chloroplast Superoxide Dismutase
pdb|3S0P|A Chain A, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|B Chain B, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|C Chain C, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|D Chain D, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|E Chain E, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|F Chain F, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|G Chain G, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|H Chain H, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
Length = 154
Score = 157 bits (396), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 101/152 (66%), Gaps = 2/152 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTG 104
T KAVA + +G++ Q+ DGPTT+ + L+ G HGFH+H YGD + C STG
Sbjct: 2 TKKAVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTG 61
Query: 105 DHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVI 164
HFNP + HG P D IRHAGDLGNI DG A++ +VD IPL GPNS++GR++V+
Sbjct: 62 AHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQ--IPLTGPNSVVGRALVV 119
Query: 165 HDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
H+ DDLGK G+ S GNAG ++ACGV+GL
Sbjct: 120 HELEDDLGKGGHELSLTTGNAGGRLACGVVGL 151
>pdb|3GTT|A Chain A, Mouse Sod1
pdb|3GTT|B Chain B, Mouse Sod1
pdb|3GTT|C Chain C, Mouse Sod1
pdb|3GTT|D Chain D, Mouse Sod1
pdb|3GTT|E Chain E, Mouse Sod1
pdb|3GTT|F Chain F, Mouse Sod1
Length = 153
Score = 151 bits (382), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 100/152 (65%), Gaps = 3/152 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTG 104
+KAV + +G +HF+Q+ G P + G + L++G HGFH+H YGD C S G
Sbjct: 2 MKAVCVLKGDGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAG 61
Query: 105 DHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVI 164
HFNP K HGGP D RH GDLGN+ G DG A ++I D ++I L G +SIIGR++V+
Sbjct: 62 PHFNPHSKKHGGPADEERHVGDLGNVTAGKDGVANVSIED--RVISLSGEHSIIGRTMVV 119
Query: 165 HDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 HEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1TO4|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
Length = 156
Score = 151 bits (382), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGD-GPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTG 104
+KAV + G KG++ F QE D GP + L G HGFH+H +GD + C S G
Sbjct: 4 MKAVCVMTGTAGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAG 63
Query: 105 DHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVI 164
HFNP ++ HG PED IRH GDLGN+ G DG A N D KLI L G +SIIGRS+VI
Sbjct: 64 AHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATD--KLISLNGSHSIIGRSMVI 121
Query: 165 HDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQA 198
H+ DDLG+ G+ SK GNAG ++ACGV+GL A
Sbjct: 122 HENEDDLGRGGHELSKVTGNAGGRLACGVVGLAA 155
>pdb|3GTV|A Chain A, Human-Mouse Sod1 Chimera
pdb|3GTV|B Chain B, Human-Mouse Sod1 Chimera
pdb|3GTV|C Chain C, Human-Mouse Sod1 Chimera
pdb|3GTV|D Chain D, Human-Mouse Sod1 Chimera
pdb|3GTV|E Chain E, Human-Mouse Sod1 Chimera
pdb|3GTV|F Chain F, Human-Mouse Sod1 Chimera
pdb|3GTV|G Chain G, Human-Mouse Sod1 Chimera
pdb|3GTV|H Chain H, Human-Mouse Sod1 Chimera
pdb|3GTV|I Chain I, Human-Mouse Sod1 Chimera
pdb|3GTV|J Chain J, Human-Mouse Sod1 Chimera
pdb|3GTV|K Chain K, Human-Mouse Sod1 Chimera
pdb|3GTV|L Chain L, Human-Mouse Sod1 Chimera
Length = 153
Score = 150 bits (378), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 103/153 (67%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 1 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ G DG A ++I D ++I L G +SIIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTAGKDGVANVSIED--RVISLSGEHSIIGRTMV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1XSO|A Chain A, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
pdb|1XSO|B Chain B, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
Length = 150
Score = 149 bits (377), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 99/150 (66%), Gaps = 3/150 (2%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGD 105
VKAV + KG++HF+Q+ +G +++G + L+ G HGFHIHV+GD + C S G
Sbjct: 1 VKAVCVLAGSGDVKGVVHFEQQDEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSAGS 60
Query: 106 HFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 165
HFNP K+HG P D RH GDLGN+ G A+ I D LI L GPNSIIGR+ V+H
Sbjct: 61 HFNPENKNHGAPGDTDRHVGDLGNVTA-EGGVAQFKITD--SLISLKGPNSIIGRTAVVH 117
Query: 166 DKHDDLGKVGNYHSKKNGNAGDKIACGVIG 195
+K DDLGK GN S K GNAG ++ACGVIG
Sbjct: 118 EKADDLGKGGNDESLKTGNAGGRLACGVIG 147
>pdb|3F7K|A Chain A, X-Ray Crystal Structure Of An Alvinella Pompejana Cu,Zn
Superoxide Dismutase- Hydrogen Peroxide Complex
pdb|3F7L|A Chain A, X-Ray Crystal Structure Of Alvinella Pompejana Cu,Zn
Superoxide Dismutase
Length = 152
Score = 147 bits (371), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 99/151 (65%), Gaps = 3/151 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGD 105
+ AV + G +H K+EGD T+ G + L+ G HGFH+H +GD + C S G
Sbjct: 2 IHAVCVLKGDSPVTGTIHLKEEGD-MVTVTGEITGLTPGKHGFHVHEFGDNTNGCTSAGG 60
Query: 106 HFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 165
HFNP K HG PED RHAGDLGN+ G DGKA IN+ D KL+ L GP+S+IGR++V+H
Sbjct: 61 HFNPHGKEHGAPEDENRHAGDLGNVVAGEDGKAVINMKD--KLVKLTGPDSVIGRTLVVH 118
Query: 166 DKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
DDLG+ G+ SK GNAG ++ACGVIG+
Sbjct: 119 VDEDDLGRGGHEQSKITGNAGGRLACGVIGI 149
>pdb|1N18|A Chain A, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|B Chain B, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|C Chain C, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|D Chain D, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|E Chain E, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|F Chain F, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|G Chain G, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|H Chain H, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|I Chain I, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|J Chain J, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
Length = 154
Score = 146 bits (369), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 102/153 (66%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAVA + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 2 ATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G +SIIGR++V
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHSIIGRTLV 119
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|1SOS|A Chain A, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|F Chain F, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|B Chain B, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|G Chain G, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|C Chain C, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|H Chain H, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|D Chain D, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|I Chain I, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|E Chain E, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|J Chain J, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
Length = 154
Score = 146 bits (369), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 102/153 (66%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAVA + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 2 ATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G +SIIGR++V
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHSIIGRTLV 119
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|1L3N|A Chain A, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|1L3N|B Chain B, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|2AF2|A Chain A, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2AF2|B Chain B, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2LU5|A Chain A, Structure And Chemical Shifts Of Cu(I),Zn(Ii) Superoxide
Dismutase By Solid-State Nmr
Length = 153
Score = 146 bits (369), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 102/153 (66%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAVA + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 1 ATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G +SIIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHSIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1N19|A Chain A, Structure Of The Hsod A4v Mutant
pdb|1N19|B Chain B, Structure Of The Hsod A4v Mutant
Length = 154
Score = 145 bits (366), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 102/150 (68%), Gaps = 4/150 (2%)
Query: 49 VAYVISKWGP-KGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDH 106
V V+ GP +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S G H
Sbjct: 5 VVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 64
Query: 107 FNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHD 166
FNP + HGGP+D RH GDLGN+ DG A ++I D +I L G +SIIGR++V+H+
Sbjct: 65 FNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHSIIGRTLVVHE 122
Query: 167 KHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|2GBT|A Chain A, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|B Chain B, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|C Chain C, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|D Chain D, C6aC111A CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 145 bits (366), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 102/153 (66%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAVA + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 1 ATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G ++IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHAIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1FUN|A Chain A, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|F Chain F, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|B Chain B, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|G Chain G, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|C Chain C, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|H Chain H, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|D Chain D, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|I Chain I, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|E Chain E, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|J Chain J, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
Length = 153
Score = 145 bits (366), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 102/153 (66%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAVA + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 1 ATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G +SIIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHSIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S + GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTETGNAGSRLACGVIGI 151
>pdb|1E9P|A Chain A, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 100/152 (65%), Gaps = 4/152 (2%)
Query: 48 AVAYVISKWGP-KGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDH 106
+ V+S GP +G +HF+ +GD + G++ L++G HGFH+H +GD C S G H
Sbjct: 3 SAVCVLSGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPH 61
Query: 107 FNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHD 166
FNP K HGGP D RH GDLGN+ +G A ++IVD LI L G SIIGR++V+H+
Sbjct: 62 FNPLSKKHGGPSDEERHVGDLGNVTADSNGVAIVDIVD--PLISLSGEYSIIGRTMVVHE 119
Query: 167 KHDDLGKVGNYHSKKNGNAGDKIACGVIGLQA 198
K DDLG+ GN S K GNAG ++ACGVIG+ +
Sbjct: 120 KPDDLGRGGNEESTKTGNAGSRLACGVIGIAS 151
>pdb|3LTV|A Chain A, Mouse-Human Sod1 Chimera
pdb|3LTV|B Chain B, Mouse-Human Sod1 Chimera
pdb|3LTV|C Chain C, Mouse-Human Sod1 Chimera
pdb|3LTV|D Chain D, Mouse-Human Sod1 Chimera
pdb|3LTV|E Chain E, Mouse-Human Sod1 Chimera
pdb|3LTV|F Chain F, Mouse-Human Sod1 Chimera
Length = 153
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 97/153 (63%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
+KAV + +G +HF+Q+ G P + G + L++G HGFH+H YGD C S
Sbjct: 1 AMKAVCVLKGDGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP K HGGP D RH GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 61 GPHFNPHSKKHGGPADEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHCIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1E9O|A Chain A, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 100/150 (66%), Gaps = 4/150 (2%)
Query: 48 AVAYVISKWGP-KGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDH 106
+ V+S GP +G +HF+ +GD + G++ L++G HGFH+H +GD C S G H
Sbjct: 4 SAVCVLSGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPH 62
Query: 107 FNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHD 166
FNP K HGGP+D RH GDLGN+ +G A ++IVD LI L G SIIGR++V+H+
Sbjct: 63 FNPLSKKHGGPKDEERHVGDLGNVTADSNGVAIVDIVD--PLISLSGEYSIIGRTMVVHE 120
Query: 167 KHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
K DDLG+ GN S K GNAG ++ACGVIG+
Sbjct: 121 KPDDLGRGGNEESTKTGNAGSRLACGVIGI 150
>pdb|1E9Q|A Chain A, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 144 bits (363), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 100/150 (66%), Gaps = 4/150 (2%)
Query: 48 AVAYVISKWGP-KGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDH 106
+ V+S GP +G +HF+ +GD + G++ L++G HGFH+H +GD C S G H
Sbjct: 3 SAVCVLSGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPH 61
Query: 107 FNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHD 166
FNP K HGGP+D RH GDLGN+ +G A ++IVD LI L G SIIGR++V+H+
Sbjct: 62 FNPLSKKHGGPKDEERHVGDLGNVTADSNGVAIVDIVD--PLISLSGEYSIIGRTMVVHE 119
Query: 167 KHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
K DDLG+ GN S K GNAG ++ACGVIG+
Sbjct: 120 KPDDLGRGGNEESTKTGNAGSRLACGVIGI 149
>pdb|1PTZ|A Chain A, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
pdb|1PTZ|B Chain B, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
Length = 153
Score = 144 bits (363), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 101/153 (66%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAVA + +GI++F+Q E +GP + G++ L++G GFH+H +GD C S
Sbjct: 1 ATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLRGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G +SIIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHSIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3SOD|O Chain O, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|Y Chain Y, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|G Chain G, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|B Chain B, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
Length = 152
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 99/151 (65%), Gaps = 3/151 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGD 105
KAVA + +G +HF+ +GD + G++ L++G HGFH+H +GD C S G
Sbjct: 3 TKAVAVLKGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGP 61
Query: 106 HFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 165
HFNP K HGGP+D RH GDLGN+ +G A ++IVD LI L G SIIGR++V+H
Sbjct: 62 HFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVD--PLISLSGEYSIIGRTMVVH 119
Query: 166 DKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+K DDLG+ GN S K GNAG ++ACGVIG+
Sbjct: 120 EKPDDLGRGGNEESTKTGNAGSRLACGVIGI 150
>pdb|1AZV|A Chain A, Familial Als Mutant G37r Cuznsod (Human)
pdb|1AZV|B Chain B, Familial Als Mutant G37r Cuznsod (Human)
Length = 153
Score = 143 bits (361), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 1 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKRLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHCIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1SDA|O Chain O, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|Y Chain Y, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|B Chain B, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|G Chain G, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
Length = 152
Score = 143 bits (361), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 98/151 (64%), Gaps = 3/151 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGD 105
KAV + +G +HF+ +GD + G++ L++G HGFH+H +GD C S G
Sbjct: 3 TKAVCVLKGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGP 61
Query: 106 HFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 165
HFNP K HGGP+D RH GDLGN+ +G A ++IVD LI L G SIIGR++V+H
Sbjct: 62 HFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVD--PLISLSGEXSIIGRTMVVH 119
Query: 166 DKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+K DDLG+ GN S K GNAG ++ACGVIG+
Sbjct: 120 EKPDDLGRGGNEESTKTGNAGSRLACGVIGI 150
>pdb|1UXM|A Chain A, A4v Mutant Of Human Sod1
pdb|1UXM|B Chain B, A4v Mutant Of Human Sod1
pdb|1UXM|C Chain C, A4v Mutant Of Human Sod1
pdb|1UXM|D Chain D, A4v Mutant Of Human Sod1
pdb|1UXM|E Chain E, A4v Mutant Of Human Sod1
pdb|1UXM|F Chain F, A4v Mutant Of Human Sod1
pdb|1UXM|G Chain G, A4v Mutant Of Human Sod1
pdb|1UXM|H Chain H, A4v Mutant Of Human Sod1
pdb|1UXM|I Chain I, A4v Mutant Of Human Sod1
pdb|1UXM|J Chain J, A4v Mutant Of Human Sod1
pdb|1UXM|K Chain K, A4v Mutant Of Human Sod1
pdb|1UXM|L Chain L, A4v Mutant Of Human Sod1
Length = 153
Score = 143 bits (360), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 101/150 (67%), Gaps = 4/150 (2%)
Query: 49 VAYVISKWGP-KGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDH 106
V V+ GP +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S G H
Sbjct: 4 VVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 63
Query: 107 FNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHD 166
FNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + IIGR++V+H+
Sbjct: 64 FNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHCIIGRTLVVHE 121
Query: 167 KHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 122 KADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3GZQ|A Chain A, Human Sod1 A4v Metal-Free Variant
pdb|3GZQ|B Chain B, Human Sod1 A4v Metal-Free Variant
Length = 154
Score = 143 bits (360), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 101/150 (67%), Gaps = 4/150 (2%)
Query: 49 VAYVISKWGP-KGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDH 106
V V+ GP +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S G H
Sbjct: 5 VVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPH 64
Query: 107 FNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHD 166
FNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + IIGR++V+H+
Sbjct: 65 FNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHCIIGRTLVVHE 122
Query: 167 KHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 123 KADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|4B3E|A Chain A, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|B Chain B, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|C Chain C, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|D Chain D, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|E Chain E, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|F Chain F, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|G Chain G, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|H Chain H, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|I Chain I, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|J Chain J, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate
Length = 154
Score = 143 bits (360), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 2 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHCIIGRTLV 119
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|1HL4|A Chain A, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|B Chain B, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|C Chain C, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|D Chain D, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1SPD|A Chain A, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
pdb|1SPD|B Chain B, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
Length = 154
Score = 142 bits (359), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 2 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHCIIGRTLV 119
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|1HL5|A Chain A, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|B Chain B, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|C Chain C, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|D Chain D, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|E Chain E, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|F Chain F, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|G Chain G, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|H Chain H, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|I Chain I, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|J Chain J, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|K Chain K, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|L Chain L, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|M Chain M, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|N Chain N, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|O Chain O, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|P Chain P, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|Q Chain Q, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|S Chain S, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1PU0|A Chain A, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|B Chain B, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|C Chain C, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|D Chain D, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|E Chain E, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|F Chain F, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|G Chain G, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|H Chain H, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|I Chain I, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|J Chain J, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|2C9U|A Chain A, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9U|F Chain F, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9V|A Chain A, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2C9V|F Chain F, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2V0A|A Chain A, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|2V0A|F Chain F, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|3ECU|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3KH3|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|G Chain G, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|H Chain H, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|I Chain I, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|J Chain J, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|K Chain K, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|L Chain L, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH4|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3RE0|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
Length = 153
Score = 142 bits (359), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 1 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHCIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|2C9S|A Chain A, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|2C9S|F Chain F, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|3T5W|A Chain A, 2me Modified Human Sod1
pdb|3T5W|B Chain B, 2me Modified Human Sod1
pdb|3T5W|D Chain D, 2me Modified Human Sod1
pdb|3T5W|E Chain E, 2me Modified Human Sod1
pdb|3T5W|F Chain F, 2me Modified Human Sod1
pdb|3T5W|G Chain G, 2me Modified Human Sod1
pdb|3T5W|H Chain H, 2me Modified Human Sod1
pdb|3T5W|I Chain I, 2me Modified Human Sod1
pdb|3T5W|J Chain J, 2me Modified Human Sod1
pdb|3T5W|K Chain K, 2me Modified Human Sod1
pdb|3T5W|L Chain L, 2me Modified Human Sod1
pdb|3T5W|M Chain M, 2me Modified Human Sod1
Length = 153
Score = 142 bits (359), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 1 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHXIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1MFM|A Chain A, Monomeric Human Sod Mutant F50eG51EE133Q AT ATOMIC
Resolution
pdb|1KMG|A Chain A, The Solution Structure Of Monomeric Copper-Free Superoxide
Dismutase
pdb|1RK7|A Chain A, Solution Structure Of Apo Cu,Zn Superoxide Dismutase: Role
Of Metal Ions In Protein Folding
Length = 153
Score = 142 bits (359), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAVA + +GI++F+Q E +GP + G++ L++G HGFH+H D C S
Sbjct: 1 ATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G +SIIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHSIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEQSTKTGNAGSRLACGVIGI 151
>pdb|1BA9|A Chain A, The Solution Structure Of Reduced Monomeric Superoxide
Dismutase, Nmr, 36 Structures
Length = 153
Score = 142 bits (359), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 100/152 (65%), Gaps = 3/152 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTG 104
KAVA + +GI++F+Q E +GP + G++ L++G HGFH+H D C S G
Sbjct: 2 TKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAG 61
Query: 105 DHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVI 164
HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G +SIIGR++V+
Sbjct: 62 PHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHSIIGRTLVV 119
Query: 165 HDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 HEKADDLGKGGNEQSTKTGNAGSRLACGVIGI 151
>pdb|1Q0E|A Chain A, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|1Q0E|B Chain B, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|2SOD|O Chain O, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|Y Chain Y, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|B Chain B, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|G Chain G, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
Length = 152
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 98/151 (64%), Gaps = 3/151 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGD 105
KAV + +G +HF+ +GD + G++ L++G HGFH+H +GD C S G
Sbjct: 3 TKAVCVLKGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGP 61
Query: 106 HFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 165
HFNP K HGGP+D RH GDLGN+ +G A ++IVD LI L G SIIGR++V+H
Sbjct: 62 HFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVD--PLISLSGEYSIIGRTMVVH 119
Query: 166 DKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+K DDLG+ GN S K GNAG ++ACGVIG+
Sbjct: 120 EKPDDLGRGGNEESTKTGNAGSRLACGVIGI 150
>pdb|1COB|A Chain A, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1COB|B Chain B, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1SXA|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXA|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXN|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXN|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXS|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXS|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXZ|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1SXZ|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1CBJ|A Chain A, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|1CBJ|B Chain B, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|2AEO|A Chain A, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2AEO|B Chain B, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2Z7U|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7U|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|3HW7|A Chain A, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
pdb|3HW7|B Chain B, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
Length = 151
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 98/151 (64%), Gaps = 3/151 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGD 105
KAV + +G +HF+ +GD + G++ L++G HGFH+H +GD C S G
Sbjct: 2 TKAVCVLKGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGP 60
Query: 106 HFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 165
HFNP K HGGP+D RH GDLGN+ +G A ++IVD LI L G SIIGR++V+H
Sbjct: 61 HFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVD--PLISLSGEYSIIGRTMVVH 118
Query: 166 DKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+K DDLG+ GN S K GNAG ++ACGVIG+
Sbjct: 119 EKPDDLGRGGNEESTKTGNAGSRLACGVIGI 149
>pdb|3ECW|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
Length = 153
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 1 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNRAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHCIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|2R27|A Chain A, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
pdb|2R27|B Chain B, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
Length = 154
Score = 142 bits (357), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAVA + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 2 ATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D R G LGN+ DG A ++I D +I L G +SIIGR++V
Sbjct: 62 GPHFNPLSRKHGGPKDEERSVGSLGNVTADKDGVADVSIED--SVISLSGDHSIIGRTLV 119
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|1E9P|B Chain B, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 142 bits (357), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 98/154 (63%), Gaps = 4/154 (2%)
Query: 46 VKAVAYVISKWGP-KGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTG 104
+ V+S GP +G +HF+ GD + G++ L++G HGFH+H +GD C S G
Sbjct: 1 ATSAVCVLSGDGPVQGTIHFEASGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAG 59
Query: 105 DHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVI 164
HFNP K HGGP D RH GDLGN+ +G A ++IVD LI L G SIIGR++V+
Sbjct: 60 PHFNPLSKKHGGPSDDERHVGDLGNVTADKNGVAIVDIVD--PLISLSGEYSIIGRTMVV 117
Query: 165 HDKHDDLGKVGNYHSKKNGNAGDKIACGVIGLQA 198
H+K DDLG+ GN S GNAG ++ACGVIG+ +
Sbjct: 118 HEKPDDLGRGGNEESTSTGNAGSRLACGVIGIAS 151
>pdb|2XJK|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase
Length = 153
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAVA + +GI++F+Q E +GP + G++ L++G HGFH+H D C S
Sbjct: 1 ATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G ++IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHAIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1CB4|A Chain A, Crystal Structure Of Copper, Zinc Superoxide Dismutase
pdb|1CB4|B Chain B, Crystal Structure Of Copper, Zinc Superoxide Dismutase
Length = 151
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 98/151 (64%), Gaps = 3/151 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGD 105
KAV + +G +HF+ +GD + G++ L++G HGFH+H +GD C S G
Sbjct: 2 TKAVCVLKGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGP 60
Query: 106 HFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 165
HFNP K HGGP+D RH GDLGN+ +G A ++IVD LI L G SIIGR++V+H
Sbjct: 61 HFNPLSKKHGGPKDDERHVGDLGNVTADKNGVAIVDIVD--PLISLSGEYSIIGRTMVVH 118
Query: 166 DKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+K DDLG+ GN S K GNAG ++ACGVIG+
Sbjct: 119 EKPDDLGRGGNEESTKTGNAGSRLACGVIGI 149
>pdb|2WYT|A Chain A, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WYT|F Chain F, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WZ0|A Chain A, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ0|F Chain F, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ5|A Chain A, L38v Sod1 Mutant Complexed With L-Methionine.
pdb|2WZ5|F Chain F, L38v Sod1 Mutant Complexed With L-Methionine
Length = 153
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ +++G HGFH+H +GD C S
Sbjct: 1 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHCIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|2WYZ|A Chain A, L38v Sod1 Mutant Complexed With Ump
pdb|2WYZ|F Chain F, L38v Sod1 Mutant Complexed With Ump
Length = 153
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ +++G HGFH+H +GD C S
Sbjct: 1 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHXIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1OZU|A Chain A, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
pdb|1OZU|B Chain B, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
Length = 153
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 1 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHXIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN + K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEENTKTGNAGSRLACGVIGI 151
>pdb|2ZKY|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|E Chain E, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|F Chain F, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|G Chain G, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|H Chain H, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|I Chain I, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|J Chain J, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
Length = 159
Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 100/156 (64%), Gaps = 3/156 (1%)
Query: 42 GVPTVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFC 100
G KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C
Sbjct: 4 GSMATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGC 63
Query: 101 QSTGDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGR 160
S G HFNP + HGGP+D RH GDLGN+ D A ++I D +I L G + IIGR
Sbjct: 64 TSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVSIED--SVISLSGDHCIIGR 121
Query: 161 SVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
++V+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 122 TLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 157
>pdb|1UXL|A Chain A, I113t Mutant Of Human Sod1
pdb|1UXL|B Chain B, I113t Mutant Of Human Sod1
pdb|1UXL|C Chain C, I113t Mutant Of Human Sod1
pdb|1UXL|D Chain D, I113t Mutant Of Human Sod1
pdb|1UXL|E Chain E, I113t Mutant Of Human Sod1
pdb|1UXL|F Chain F, I113t Mutant Of Human Sod1
pdb|1UXL|G Chain G, I113t Mutant Of Human Sod1
pdb|1UXL|H Chain H, I113t Mutant Of Human Sod1
pdb|1UXL|I Chain I, I113t Mutant Of Human Sod1
pdb|1UXL|J Chain J, I113t Mutant Of Human Sod1
pdb|3ECV|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|4A7G|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group.
pdb|4A7Q|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7Q|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7S|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7S|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7T|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7T|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7U|A Chain A, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7U|F Chain F, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7V|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
pdb|4A7V|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
Length = 153
Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 99/152 (65%), Gaps = 3/152 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTG 104
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S G
Sbjct: 2 TKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAG 61
Query: 105 DHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVI 164
HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + I GR++V+
Sbjct: 62 PHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHCITGRTLVV 119
Query: 165 HDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|2WKO|F Chain F, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 140 bits (354), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 2 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ D A ++I D +I L G + IIGR++V
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVSIED--SVISLSGDHXIIGRTLV 119
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|3GZP|A Chain A, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|B Chain B, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|C Chain C, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|D Chain D, Human Sod1 G93a Metal-Free Variant
pdb|2WZ6|A Chain A, G93a Sod1 Mutant Complexed With Quinazoline.
pdb|2WZ6|F Chain F, G93a Sod1 Mutant Complexed With Quinazoline
Length = 153
Score = 140 bits (354), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 1 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ D A ++I D +I L G + IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVSIED--SVISLSGDHCIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3GZO|A Chain A, Human Sod1 G93a Variant
pdb|3GZO|B Chain B, Human Sod1 G93a Variant
pdb|3GZO|C Chain C, Human Sod1 G93a Variant
pdb|3GZO|D Chain D, Human Sod1 G93a Variant
pdb|3GZO|E Chain E, Human Sod1 G93a Variant
pdb|3GZO|F Chain F, Human Sod1 G93a Variant
pdb|3GZO|G Chain G, Human Sod1 G93a Variant
pdb|3GZO|H Chain H, Human Sod1 G93a Variant
pdb|3GZO|I Chain I, Human Sod1 G93a Variant
pdb|3GZO|J Chain J, Human Sod1 G93a Variant
pdb|2WKO|A Chain A, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 140 bits (354), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 2 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ D A ++I D +I L G + IIGR++V
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDAVADVSIED--SVISLSGDHCIIGRTLV 119
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|1OEZ|W Chain W, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|X Chain X, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Y Chain Y, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Z Chain Z, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OZT|M Chain M, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|N Chain N, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|G Chain G, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|H Chain H, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|K Chain K, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|L Chain L, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|I Chain I, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|J Chain J, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
Length = 153
Score = 140 bits (354), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGF +H +GD C S
Sbjct: 1 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHCIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3H2Q|A Chain A, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|B Chain B, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|C Chain C, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|D Chain D, Human Sod1 H80r Variant, P21 Crystal Form
Length = 153
Score = 140 bits (354), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 1 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D R GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERRVGDLGNVTADKDGVADVSIED--SVISLSGDHCIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3QQD|A Chain A, Human Sod1 H80r Variant, P212121 Crystal Form
pdb|3QQD|B Chain B, Human Sod1 H80r Variant, P212121 Crystal Form
Length = 154
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 2 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D R GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 62 GPHFNPLSRKHGGPKDEERRVGDLGNVTADKDGVADVSIED--SVISLSGDHXIIGRTLV 119
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|2ZKW|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKW|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKX|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
Length = 159
Score = 140 bits (353), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 100/156 (64%), Gaps = 3/156 (1%)
Query: 42 GVPTVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFC 100
G KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C
Sbjct: 4 GSMATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGC 63
Query: 101 QSTGDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGR 160
S G HFNP + HGGP+D RH GDL N+ DG A ++I D +I L G + IIGR
Sbjct: 64 TSAGPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIED--SVISLSGDHCIIGR 121
Query: 161 SVVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
++V+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 122 TLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 157
>pdb|1E9O|B Chain B, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 140 bits (352), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 97/151 (64%), Gaps = 3/151 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGD 105
KAV + +G +HF+ +GD + G++ L++G HGFH+H +GD C S G
Sbjct: 3 TKAVCVLKGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGP 61
Query: 106 HFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 165
HFNP K HGGP+D RH GDLGN+ +G A ++IVD LI L G SIIGR++V+H
Sbjct: 62 HFNPLSKKHGGPKDDERHVGDLGNVTADKNGVAIVDIVD--PLISLSGEYSIIGRTMVVH 119
Query: 166 DKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+K DDLG+ GN S GNAG ++ACGVIG+
Sbjct: 120 EKPDDLGRGGNEESTSTGNAGSRLACGVIGI 150
>pdb|1E9Q|B Chain B, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 140 bits (352), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 97/151 (64%), Gaps = 3/151 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGD 105
KAV + +G +HF+ +GD + G++ L++G HGFH+H +GD C S G
Sbjct: 2 TKAVCVLKGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGP 60
Query: 106 HFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 165
HFNP K HGGP+D RH GDLGN+ +G A ++IVD LI L G SIIGR++V+H
Sbjct: 61 HFNPLSKKHGGPKDDERHVGDLGNVTADKNGVAIVDIVD--PLISLSGEYSIIGRTMVVH 118
Query: 166 DKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+K DDLG+ GN S GNAG ++ACGVIG+
Sbjct: 119 EKPDDLGRGGNEESTSTGNAGSRLACGVIGI 149
>pdb|2VR8|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
pdb|2VR8|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
Length = 154
Score = 140 bits (352), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 2 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDL N+ DG A ++I D +I L G + IIGR++V
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIED--SVISLSGDHXIIGRTLV 119
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|3CQQ|A Chain A, Human Sod1 G85r Variant, Structure Ii
pdb|3CQQ|B Chain B, Human Sod1 G85r Variant, Structure Ii
Length = 153
Score = 140 bits (352), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 1 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDL N+ DG A ++I D +I L G + IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIED--SVISLSGDHXIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|2VR7|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
pdb|2VR7|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
Length = 154
Score = 140 bits (352), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 2 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 61
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDL N+ DG A ++I D +I L G + IIGR++V
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIED--SVISLSGDHCIIGRTLV 119
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|2VR6|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|2VR6|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|3CQP|A Chain A, Human Sod1 G85r Variant, Structure I
pdb|3CQP|B Chain B, Human Sod1 G85r Variant, Structure I
pdb|3CQP|C Chain C, Human Sod1 G85r Variant, Structure I
pdb|3CQP|D Chain D, Human Sod1 G85r Variant, Structure I
Length = 153
Score = 140 bits (352), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 1 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDL N+ DG A ++I D +I L G + IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIED--SVISLSGDHCIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|4A7G|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group
Length = 153
Score = 139 bits (351), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 98/152 (64%), Gaps = 3/152 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTG 104
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S G
Sbjct: 2 TKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAG 61
Query: 105 DHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVI 164
HFNP + HGGP+D RH GDLGN+ DG A ++ D +I L G + I GR++V+
Sbjct: 62 PHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSTED--SVISLSGDHCITGRTLVV 119
Query: 165 HDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|1DSW|A Chain A, The Solution Structure Of A Monomeric, Reduced Form Of
Human Copper, Zinc Superoxide Dismutase Bearing The Same
Charge As The Native Protein
Length = 153
Score = 139 bits (351), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 98/151 (64%), Gaps = 3/151 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTG 104
KAVA + +GI++F+Q E +GP + G++ L++G HGFH+H D C S G
Sbjct: 2 TKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAG 61
Query: 105 DHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVI 164
HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G +SIIGR++V+
Sbjct: 62 PHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHSIIGRTLVV 119
Query: 165 HDKHDDLGKVGNYHSKKNGNAGDKIACGVIG 195
H+K DDLGK GN S K GNAG ++ACG IG
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGKIG 150
>pdb|1P1V|A Chain A, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|B Chain B, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|C Chain C, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
Length = 153
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 1 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHXIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K D LGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADHLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3H2P|A Chain A, Human Sod1 D124v Variant
pdb|3H2P|B Chain B, Human Sod1 D124v Variant
Length = 153
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGFH+H +GD C S
Sbjct: 1 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHCIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKAVDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|2GBU|A Chain A, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|B Chain B, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|C Chain C, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|D Chain D, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBV|A Chain A, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|B Chain B, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|C Chain C, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|D Chain D, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|E Chain E, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|F Chain F, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|G Chain G, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|H Chain H, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|I Chain I, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|J Chain J, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAVA + +GI++F+Q E +GP + G++ L++G HGFH+H +GD S
Sbjct: 1 ATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGATSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G ++IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHAIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++A GVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLAAGVIGI 151
>pdb|3GQF|A Chain A, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|B Chain B, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|C Chain C, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|D Chain D, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|E Chain E, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|F Chain F, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3K91|A Chain A, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
pdb|3K91|B Chain B, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
Length = 153
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 98/153 (64%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGF + +GD C S
Sbjct: 1 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHCIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|2NNX|A Chain A, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|B Chain B, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|C Chain C, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|D Chain D, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
Length = 154
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 98/153 (64%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAV + +GI++F+Q E +GP + G++ L++G HGF + +GD C S
Sbjct: 2 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSA 61
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G + IIGR++V
Sbjct: 62 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHCIIGRTLV 119
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
>pdb|4BCY|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Mutation H43f
Length = 153
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAVA + +GI++F+Q E +GP + G++ L++G GFH+H D C S
Sbjct: 1 ATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLFGFHVHEEEDNTAGCTSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G ++IIGR++V
Sbjct: 61 GPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHAIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 119 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3KBE|A Chain A, Metal-Free C. Elegans Cu,Zn Superoxide Dismutase
pdb|3KBF|A Chain A, C. Elegans Cu,Zn Superoxide Dismutase
Length = 157
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 90/137 (65%), Gaps = 6/137 (4%)
Query: 65 KQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKHHGGPEDWIRHA 124
K E D I+G + L+ G HGFH+H YGD + C S G HFNPF K HGGP+ IRH
Sbjct: 22 KSEND-QAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHV 80
Query: 125 GDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGK-VGN--YHSKK 181
GDLGN+ G DG AKI + D L+ L GPN+++GRS+V+H DDLG+ VG+ SKK
Sbjct: 81 GDLGNVEAGADGVAKIKLTD--TLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKK 138
Query: 182 NGNAGDKIACGVIGLQA 198
GNAG + ACGVI L A
Sbjct: 139 TGNAGARAACGVIALAA 155
>pdb|2XJL|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Cu
Ligands
Length = 153
Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 97/152 (63%), Gaps = 3/152 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTG 104
KAVA + +GI++F+Q E +GP + G++ L++G HGF + D C S G
Sbjct: 2 TKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFSVSEEEDNTAGCTSAG 61
Query: 105 DHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVI 164
HFNP + HGGP+D RH GDLGN+ DG A ++I D +I L G ++IIGR++V+
Sbjct: 62 PHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIED--SVISLSGDHAIIGRTLVV 119
Query: 165 HDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 SEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3MND|A Chain A, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
pdb|3MND|B Chain B, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
Length = 152
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 94/151 (62%), Gaps = 3/151 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGD 105
+KAV + + G KG++HF Q GD + L G HGFH+H +GD C S G
Sbjct: 1 MKAVCVMRGEEGVKGVVHFTQAGD-AVKVHAEFEGLKPGKHGFHVHEFGDTTQGCTSAGA 59
Query: 106 HFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH 165
HFNP K+HG P+ RH GDLGN+ G DGKA +++ D K+I L G +S+IGRS+VIH
Sbjct: 60 HFNPHGKNHGAPDAAERHVGDLGNVTAGADGKATLDLTD--KMISLTGEHSVIGRSLVIH 117
Query: 166 DKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
DDLG G+ S GNAG ++ACG+IG+
Sbjct: 118 VDPDDLGLGGHELSLITGNAGGRVACGIIGI 148
>pdb|1F1G|A Chain A, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|B Chain B, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|C Chain C, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|D Chain D, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|E Chain E, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|F Chain F, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
Length = 154
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 94/153 (61%), Gaps = 4/153 (2%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAH-GFHIHVYGDMAHFCQST 103
V+AVA + G G++ F+Q + PTT+ + S A GFHIH +GD + C S
Sbjct: 2 VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSA 61
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNPF+K HG P D +RH GD+GN+ +G AK + K LI L+GP S++GRSVV
Sbjct: 62 GPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSF--KDSLIKLIGPTSVVGRSVV 119
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
IH DDLGK S K GNAG + ACGVIGL
Sbjct: 120 IHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 152
>pdb|1SDY|A Chain A, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|B Chain B, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|C Chain C, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|D Chain D, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1B4L|A Chain A, 15 Atmosphere Oxygen Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1YAZ|A Chain A, Azide-Bound Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1JCV|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE LOW
TEMPERATURE (-180c) Structure
pdb|1YSO|A Chain A, Yeast Cu, Zn Superoxide Dismutase With The Reduced Bridge
Broken
pdb|2JCW|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
Length = 153
Score = 134 bits (337), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 94/153 (61%), Gaps = 4/153 (2%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAH-GFHIHVYGDMAHFCQST 103
V+AVA + G G++ F+Q + PTT+ + S A GFHIH +GD + C S
Sbjct: 1 VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNPF+K HG P D +RH GD+GN+ +G AK + K LI L+GP S++GRSVV
Sbjct: 61 GPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSF--KDSLIKLIGPTSVVGRSVV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
IH DDLGK S K GNAG + ACGVIGL
Sbjct: 119 IHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 151
>pdb|1F1A|A Chain A, Crystal Structure Of Yeast H48q Cuznsod Fals Mutant Analog
Length = 154
Score = 132 bits (332), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAH-GFHIHVYGDMAHFCQST 103
V+AVA + G G++ F+Q + PTT+ + S A GFHI +GD + C S
Sbjct: 2 VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIQEFGDATNGCVSA 61
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNPF+K HG P D +RH GD+GN+ +G AK + K LI L+GP S++GRSVV
Sbjct: 62 GPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSF--KDSLIKLIGPTSVVGRSVV 119
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
IH DDLGK S K GNAG + ACGVIGL
Sbjct: 120 IHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 152
>pdb|3HFF|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Zn
Ligands
Length = 153
Score = 132 bits (332), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 96/152 (63%), Gaps = 3/152 (1%)
Query: 46 VKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTG 104
KAVA + +GI++F+Q E +GP + G++ L++G HGFH+H D C S G
Sbjct: 2 TKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAG 61
Query: 105 DHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVI 164
FNP + GGP+D R G LGN+ DG A ++I D +I L G ++IIGR++V+
Sbjct: 62 PSFNPLSRKSGGPKDEERSVGSLGNVTADKDGVADVSIED--SVISLSGDHAIIGRTLVV 119
Query: 165 HDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
H+K DDLGK GN S K GNAG ++ACGVIG+
Sbjct: 120 HEKADDLGKGGNEESTKTGNAGSRLACGVIGI 151
>pdb|3L9Y|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9Y|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 94/153 (61%), Gaps = 4/153 (2%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGD-GPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTG 104
+ A A + + G + F Q+ + P + G + L++G HGFH+H +GD + C S G
Sbjct: 1 MPAKAVCVLRGDVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAG 60
Query: 105 DHFNPFRKHHGGPEDWIRHAGDLGNIYVGFD-GKAKINIVDKHKLIPLVGPNSIIGRSVV 163
HFNP ++ HGGP +RH GDLGNI D G K++I D I L GPNSIIGR++V
Sbjct: 61 AHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQ--ISLHGPNSIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H DDLG GN SK GNAG +IACGVIGL
Sbjct: 119 VHADPDDLGLGGNELSKTTGNAGGRIACGVIGL 151
>pdb|1F18|A Chain A, Crystal Structure Of Yeast Copper-Zinc Superoxide
Dismutase Mutant Gly85arg
Length = 154
Score = 131 bits (329), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAH-GFHIHVYGDMAHFCQST 103
V+AVA + G G++ F+Q + PTT+ + S A GFHIH +GD + C S
Sbjct: 2 VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSA 61
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNPF+K HG P D +RH GD+ N+ +G AK + K LI L+GP S++GRSVV
Sbjct: 62 GPHFNPFKKTHGAPTDEVRHVGDMRNVKTDENGVAKGSF--KDSLIKLIGPTSVVGRSVV 119
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
IH DDLGK S K GNAG + ACGVIGL
Sbjct: 120 IHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 152
>pdb|1JK9|A Chain A, Heterodimer Between H48f-Ysod1 And Yccs
pdb|1JK9|C Chain C, Heterodimer Between H48f-Ysod1 And Yccs
Length = 153
Score = 131 bits (329), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAH-GFHIHVYGDMAHFCQST 103
V+AVA + G G++ F+Q + PTT+ + S A GFHI +GD + C S
Sbjct: 1 VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIFEFGDATNGCVSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNPF+K HG P D +RH GD+GN+ +G AK + K LI L+GP S++GRSVV
Sbjct: 61 GPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSF--KDSLIKLIGPTSVVGRSVV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
IH DDLGK S K GNAG + ACGVIGL
Sbjct: 119 IHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 151
>pdb|1F1D|A Chain A, Crystal Structure Of Yeast H46c Cuznsod Mutant
Length = 154
Score = 131 bits (329), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAH-GFHIHVYGDMAHFCQST 103
V+AVA + G G++ F+Q + PTT+ + S A GF IH +GD + C S
Sbjct: 2 VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFCIHEFGDATNGCVSA 61
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNPF+K HG P D +RH GD+GN+ +G AK + K LI L+GP S++GRSVV
Sbjct: 62 GPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSF--KDSLIKLIGPTSVVGRSVV 119
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
IH DDLGK S K GNAG + ACGVIGL
Sbjct: 120 IHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 152
>pdb|1B4T|A Chain A, H48c Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM TEMPERATURE
(298k) Structure
Length = 153
Score = 130 bits (328), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAH-GFHIHVYGDMAHFCQST 103
V+AVA + G G++ F+Q + PTT+ + S A GFHI +GD + C S
Sbjct: 1 VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHICEFGDATNGCVSA 60
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
G HFNPF+K HG P D +RH GD+GN+ +G AK + K LI L+GP S++GRSVV
Sbjct: 61 GPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSF--KDSLIKLIGPTSVVGRSVV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
IH DDLGK S K GNAG + ACGVIGL
Sbjct: 119 IHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 151
>pdb|3L9E|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|C Chain C, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|D Chain D, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 94/153 (61%), Gaps = 4/153 (2%)
Query: 46 VKAVAYVISKWGPKGILHFKQEGD-GPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTG 104
+ A A + + G + F Q+ + P + G + L++G HGFH+H +GD + C S G
Sbjct: 1 MPAKAVCVLRGDVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAG 60
Query: 105 DHFNPFRKHHGGPEDWIRHAGDLGNIYVGFD-GKAKINIVDKHKLIPLVGPNSIIGRSVV 163
HFNP ++ HGGP +RH GDLGNI D G K++I D I L GPNSIIGR++V
Sbjct: 61 AHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQ--ISLHGPNSIIGRTLV 118
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H DDLG G+ SK GNAG +IACGVIGL
Sbjct: 119 VHADPDDLGLGGHELSKTTGNAGGRIACGVIGL 151
>pdb|3CE1|A Chain A, Crystal Structure Of The CuZN SUPEROXIDE DISMUTASE FROM
Cryptococcus Liquefaciens Strain N6
Length = 168
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 93/154 (60%), Gaps = 4/154 (2%)
Query: 45 TVKAVAYVISKWGPKGILHFKQEGDG-PTTIKGTLYYLSQGAH-GFHIHVYGDMAHFCQS 102
T+KA+A + +G++ F QE G P T+ G + + A GFH+H +GD ++ C S
Sbjct: 4 TIKAIAVLKGDSPVQGVITFTQESSGGPVTVSGEIKNMDANAQRGFHVHQFGDNSNGCTS 63
Query: 103 TGDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSV 162
G HFNP +HG +RH GDLGN+ G AK+ I D + LVGP+SIIGR++
Sbjct: 64 AGPHFNPTGTNHGDRTAEVRHVGDLGNVKTDASGVAKVQISDSQ--LSLVGPHSIIGRTI 121
Query: 163 VIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
VIH DDLGK + S K GNAG + ACGVIG+
Sbjct: 122 VIHAGEDDLGKTDHPESLKTGNAGARSACGVIGI 155
>pdb|2E47|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
pdb|2E47|B Chain B, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
Length = 156
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 94/155 (60%), Gaps = 2/155 (1%)
Query: 42 GVPTVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQ 101
G T V+S +G + F Q DG ++G + L G +GFH+H GD++ C
Sbjct: 3 GFTTPSRAIAVLSTETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCL 62
Query: 102 STGDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRS 161
STG HFNP K HG P D RH GDLGN+ + ++I++VD I L GP+ IIGR+
Sbjct: 63 STGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQ--ISLSGPHGIIGRA 120
Query: 162 VVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
VV+H+K DD GK + S+K GNAG ++ACGVIG+
Sbjct: 121 VVLHEKADDYGKSDHPDSRKTGNAGGRVACGVIGI 155
>pdb|2E46|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
Length = 157
Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 94/155 (60%), Gaps = 2/155 (1%)
Query: 42 GVPTVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQ 101
G T V+S +G + F Q DG ++G + L G +GFH+H GD++ C
Sbjct: 4 GFTTPSRAIAVLSTETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCL 63
Query: 102 STGDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRS 161
STG HFNP K HG P D RH GDLGN+ + ++I++VD I L GP+ IIGR+
Sbjct: 64 STGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQ--ISLSGPHGIIGRA 121
Query: 162 VVIHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
VV+H+K DD GK + S+K GNAG ++ACGVIG+
Sbjct: 122 VVLHEKADDYGKSDHPDSRKTGNAGGRVACGVIGI 156
>pdb|1DO5|A Chain A, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|B Chain B, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|C Chain C, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|D Chain D, Human Copper Chaperone For Superoxide Dismutase Domain Ii
Length = 154
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 88/151 (58%), Gaps = 5/151 (3%)
Query: 48 AVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHF 107
AVA + +G++ F Q I+GT+ L G HG H+H YGD+ + C S G+HF
Sbjct: 6 AVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHF 65
Query: 108 NPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDK 167
NP HGGP+D RH GDLGN+ DG+A + D+ + +IGRS++I +
Sbjct: 66 NPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVW-----DVIGRSLIIDEG 120
Query: 168 HDDLGKVGNYHSKKNGNAGDKIACGVIGLQA 198
DDLG+ G+ SK GN+G+++ACG+I A
Sbjct: 121 EDDLGRGGHPLSKITGNSGERLACGIIARSA 151
>pdb|2JLP|A Chain A, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|B Chain B, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|C Chain C, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|D Chain D, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase
Length = 222
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 14/142 (9%)
Query: 60 GILHFKQEG-----DGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQSTGDHFNPFRKHH 114
G++ F+Q D ++G + + H+H +GD++ C+STG H+NP H
Sbjct: 62 GVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCESTGPHYNPLAVPH 121
Query: 115 GGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKV 174
+H GD GN V DG + L GP+SI+GR+VV+H DDLG+
Sbjct: 122 ------PQHPGDFGNFAV-RDGS--LWRYRAGLAASLAGPHSIVGRAVVVHAGEDDLGRG 172
Query: 175 GNYHSKKNGNAGDKIACGVIGL 196
GN S +NGNAG ++AC V+G+
Sbjct: 173 GNQASVENGNAGRRLACCVVGV 194
>pdb|4BCZ|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form.
pdb|4BCZ|B Chain B, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form
Length = 110
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 46/153 (30%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAVA + +GI++F+Q E +GP + G++ L++G HGFH+H G
Sbjct: 1 ATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHGAG--------- 51
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
GDLGN+ DG A ++I D +I L G +SIIGR++V
Sbjct: 52 ---------------------GDLGNVTADKDGVADVSIEDS--VISLSGDHSIIGRTLV 88
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K AG ++A GVIG+
Sbjct: 89 VHEK-------------AGAGAGSRLASGVIGI 108
>pdb|1XTM|B Chain B, Crystal Structure Of The Double Mutant Y88h-p104h Of A
Sod-like Protein From Bacillus Subtilis.
pdb|1XTM|A Chain A, Crystal Structure Of The Double Mutant Y88h-p104h Of A
Sod-like Protein From Bacillus Subtilis
Length = 175
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 35/152 (23%)
Query: 60 GILHFKQEGDGPTTIKGTLYYLSQGAH-GFHIHVYGDMAHF-CQSTGDHFNPFRKHHGGP 117
G + K+ D I + L GA GFHIH G +S G HFNP K HG
Sbjct: 35 GFIEIKESDDEGLDIHISANSLRPGASLGFHIHEKGSCVRPDFESAGGHFNPLNKEHGFN 94
Query: 118 EDWIRHAGDLGNIYVGFDGK---------------AKINIVDKHKLIPLVGPNSIIGRSV 162
HAGDL N+ VG DGK +K+NI+D+ G +
Sbjct: 95 NPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDED------------GSAF 142
Query: 163 VIHDKHDDLGKVGNYHSKKNGNAGDKIACGVI 194
+IH++ DD Y + +GN+G +I CG +
Sbjct: 143 IIHEQADD------YLTNPSGNSGARIVCGAL 168
>pdb|1XTL|B Chain B, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|A Chain A, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|C Chain C, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|D Chain D, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis
Length = 175
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 35/152 (23%)
Query: 60 GILHFKQEGDGPTTIKGTLYYLSQGAH-GFHIHVYGDMAHF-CQSTGDHFNPFRKHHGGP 117
G + K+ D I + L GA GFHI+ G +S G HFNP K HG
Sbjct: 35 GFIEIKESDDEGLDIHISANSLRPGASLGFHIYEKGSCVRPDFESAGGHFNPLNKEHGFN 94
Query: 118 EDWIRHAGDLGNIYVGFDGK---------------AKINIVDKHKLIPLVGPNSIIGRSV 162
HAGDL N+ VG DGK +K+NI+D+ G +
Sbjct: 95 NPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDED------------GSAF 142
Query: 163 VIHDKHDDLGKVGNYHSKKNGNAGDKIACGVI 194
+IH++ DD Y + +GN+G +I CG +
Sbjct: 143 IIHEQADD------YLTNPSGNSGARIVCGAL 168
>pdb|4BD4|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|B Chain B, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|C Chain C, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|D Chain D, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|E Chain E, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|F Chain F, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|G Chain G, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|H Chain H, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|I Chain I, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
Length = 110
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 46/153 (30%)
Query: 45 TVKAVAYVISKWGPKGILHFKQ-EGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQST 103
KAVA + +GI++F+Q E +GP + G++ L++G GFH+H G
Sbjct: 1 ATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLFGFHVHGAG--------- 51
Query: 104 GDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVV 163
GDLGN+ DG A ++I D +I L G +SIIGR++V
Sbjct: 52 ---------------------GDLGNVTADKDGVADVSIEDS--VISLSGDHSIIGRTLV 88
Query: 164 IHDKHDDLGKVGNYHSKKNGNAGDKIACGVIGL 196
+H+K AG ++A GVIG+
Sbjct: 89 VHEK-------------AGAGAGSRLASGVIGI 108
>pdb|1S4I|B Chain B, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|A Chain A, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|C Chain C, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|D Chain D, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
Length = 175
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 35/152 (23%)
Query: 60 GILHFKQEGDGPTTIKGTLYYLSQGAH-GFHIHVYGDMAHF-CQSTGDHFNPFRKHHGGP 117
G + K+ D I + L GA GFHI+ G +S G FNP K HG
Sbjct: 35 GFIEIKESDDEGLDIHISANSLRPGASLGFHIYEKGSCVRPDFESAGGPFNPLNKEHGFN 94
Query: 118 EDWIRHAGDLGNIYVGFDGK---------------AKINIVDKHKLIPLVGPNSIIGRSV 162
HAGDL N+ VG DGK +K+NI+D+ G +
Sbjct: 95 NPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDED------------GSAF 142
Query: 163 VIHDKHDDLGKVGNYHSKKNGNAGDKIACGVI 194
+IH++ DD Y + +GN+G +I CG +
Sbjct: 143 IIHEQADD------YLTNPSGNSGARIVCGAL 168
>pdb|1U3N|A Chain A, A Sod-Like Protein From B. Subtilis, Unstructured In
Solution, Becomes Ordered In The Crystal: Implications
For Function And For Fibrillogenesis
Length = 162
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 35/152 (23%)
Query: 60 GILHFKQEGDGPTTIKGTLYYLSQGAH-GFHIHVYGDMAH-FCQSTGDHFNPFRKHHGGP 117
G + K+ D I + L GA GFHI+ G +S G FNP K HG
Sbjct: 22 GFIEIKESDDEGLDIHISANSLRPGASLGFHIYEKGSCVRPDFESAGGPFNPLNKEHGFN 81
Query: 118 EDWIRHAGDLGNIYVGFDGK---------------AKINIVDKHKLIPLVGPNSIIGRSV 162
HAGDL N+ VG DGK +K+NI+D+ G +
Sbjct: 82 NPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDED------------GSAF 129
Query: 163 VIHDKHDDLGKVGNYHSKKNGNAGDKIACGVI 194
+IH++ DD Y + +GN+G +I CG +
Sbjct: 130 IIHEQADD------YLTNPSGNSGARIVCGAL 155
>pdb|1ESO|A Chain A, Monomeric Cu,Zn Superoxide Dismutase From Escherichia Coli
Length = 154
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 56/126 (44%), Gaps = 18/126 (14%)
Query: 78 LYYLSQGAHGFHIHVYGDM--------AHFCQSTGDHFNPFRK-HHGGPEDWIRHAGDLG 128
L L G HGFHIH G A +S G H +P H GPE H GDL
Sbjct: 37 LKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPE-GAGHLGDLP 95
Query: 129 NIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDK 188
+ V DGKA ++ L + I +++++H D++ + K G G++
Sbjct: 96 ALVVNNDGKATDAVIAPR----LKSLDEIKDKALMVHVGGDNM----SDQPKPLGGGGER 147
Query: 189 IACGVI 194
ACGVI
Sbjct: 148 YACGVI 153
>pdb|1IB5|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant W83y
Length = 151
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 27/162 (16%)
Query: 45 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQ--- 101
TVK K P G + Q G I L L+ G HGFHIH G A +
Sbjct: 4 TVKMTDLQTGK--PVGTIELSQNKYGVVFIP-ELADLTPGMHGFHIHQNGSCASSEKDGK 60
Query: 102 -----STGDHFNPFRKH-HGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPN 155
+ G H++P + HG P H GDL ++V +G A + L P +
Sbjct: 61 VVLGGAAGGHYDPEHTNKHGFPYTDDNHKGDLPALFVSANGLATNPV-----LAPRLTLK 115
Query: 156 SIIGRSVVIH---DKHDDLGKVGNYHSKKNGNAGDKIACGVI 194
+ G +++IH D H D+ K G G ++ACGVI
Sbjct: 116 ELKGHAIMIHAGGDNHSDM-------PKALGGGGARVACGVI 150
>pdb|1IBD|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant V29a
Length = 151
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 27/162 (16%)
Query: 45 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQ--- 101
TVK K P G + Q G I L L+ G HGFHIH G A +
Sbjct: 4 TVKMTDLQTGK--PVGTIELSQNKYGVAFIP-ELADLTPGMHGFHIHQNGSCASSEKDGK 60
Query: 102 -----STGDHFNPFRKH-HGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPN 155
+ G H++P + HG P H GDL ++V +G A + L P +
Sbjct: 61 VVLGGAAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPV-----LAPRLTLK 115
Query: 156 SIIGRSVVIH---DKHDDLGKVGNYHSKKNGNAGDKIACGVI 194
+ G +++IH D H D+ K G G ++ACGVI
Sbjct: 116 ELKGHAIMIHAGGDNHSDM-------PKALGGGGARVACGVI 150
>pdb|1OAL|A Chain A, Active Site Copper And Zinc Ions Modulate The Quaternary
Structure Of Prokaryotic Cu,Zn Superoxide Dismutase
Length = 151
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 27/162 (16%)
Query: 45 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQ--- 101
TVK K P G + Q G I L L+ G HGFHIH G A +
Sbjct: 4 TVKMTDLQTGK--PVGTIELSQNKYGVVFIP-ELADLTPGEHGFHIHQNGSCASSEKDGK 60
Query: 102 -----STGDHFNPFRKH-HGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPN 155
+ G H++P + HG P H GDL ++V +G A + L P +
Sbjct: 61 VVLGGAAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPV-----LAPRLTLK 115
Query: 156 SIIGRSVVIH---DKHDDLGKVGNYHSKKNGNAGDKIACGVI 194
+ G +++IH D H D+ K G G ++ACGVI
Sbjct: 116 ELKGHAIMIHAGGDNHSDM-------PKALGGGGARVACGVI 150
>pdb|1OAJ|A Chain A, Active Site Copper And Zinc Ions Modulate The Quaternary
Structure Of Prokaryotic Cu,Zn Superoxide Dismutase
Length = 151
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 27/162 (16%)
Query: 45 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQ--- 101
TVK K P G + Q G I L L+ G HGFHIH G A +
Sbjct: 4 TVKMTDLQTGK--PVGTIELSQNDYGVVFIP-ELADLTPGMHGFHIHQNGSCASSEKDGK 60
Query: 102 -----STGDHFNPFRKH-HGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPN 155
+ G H++P + HG P H GDL ++V +G A + L P +
Sbjct: 61 VVLGGAAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPV-----LAPRLTLK 115
Query: 156 SIIGRSVVIH---DKHDDLGKVGNYHSKKNGNAGDKIACGVI 194
+ G +++IH D H D+ K G G ++ACGVI
Sbjct: 116 ELKGHAIMIHAGGDNHSDM-------PKALGGGGARVACGVI 150
>pdb|1IBB|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant W83f
Length = 151
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 27/162 (16%)
Query: 45 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQ--- 101
TVK K P G + Q G I L L+ G HGFHIH G A +
Sbjct: 4 TVKMTDLQTGK--PVGTIELSQNKYGVVFIP-ELADLTPGMHGFHIHQNGSCASSEKDGK 60
Query: 102 -----STGDHFNPFRKH-HGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPN 155
+ G H++P + HG P H GDL ++V +G A + L P +
Sbjct: 61 VVLGGAAGGHYDPEHTNKHGFPFTDDNHKGDLPALFVSANGLATNPV-----LAPRLTLK 115
Query: 156 SIIGRSVVIH---DKHDDLGKVGNYHSKKNGNAGDKIACGVI 194
+ G +++IH D H D+ K G G ++ACGVI
Sbjct: 116 ELKGHAIMIHAGGDNHSDM-------PKALGGGGARVACGVI 150
>pdb|1BZO|A Chain A, Three-Dimensional Structure Of Prokaryotic Cu,Zn
Superoxide Dismutase From P.Leiognathi, Solved By X-Ray
Crystallography
Length = 151
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 27/162 (16%)
Query: 45 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQ--- 101
TVK K P G + Q G I L L+ G HGFHIH G A +
Sbjct: 4 TVKMTDLQTGK--PVGTIELSQNKYGVVFIP-ELADLTPGMHGFHIHQNGSCASSEKDGK 60
Query: 102 -----STGDHFNPFRKH-HGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPN 155
+ G H++P + HG P H GDL ++V +G A + L P +
Sbjct: 61 VVLGGAAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPV-----LAPRLTLK 115
Query: 156 SIIGRSVVIH---DKHDDLGKVGNYHSKKNGNAGDKIACGVI 194
+ G +++IH D H D+ K G G ++ACGVI
Sbjct: 116 ELKGHAIMIHAGGDNHSDM-------PKALGGGGARVACGVI 150
>pdb|1YAI|A Chain A, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
pdb|1YAI|B Chain B, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
pdb|1YAI|C Chain C, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
Length = 151
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 67/162 (41%), Gaps = 27/162 (16%)
Query: 45 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQ--- 101
TVK K P G + Q G L L+ G HGFHIH G A +
Sbjct: 4 TVKMTDLQTGK--PVGTIELSQNKYG-VVFTPELADLTPGMHGFHIHQNGSCASSEKDGK 60
Query: 102 -----STGDHFNPFRKH-HGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPN 155
+ G H++P + HG P H GDL ++V +G A + L P +
Sbjct: 61 VVLGGAAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPV-----LAPRLTLK 115
Query: 156 SIIGRSVVIH---DKHDDLGKVGNYHSKKNGNAGDKIACGVI 194
+ G +++IH D H D+ K G G ++ACGVI
Sbjct: 116 ELKGHAIMIHAGGDNHSDM-------PKALGGGGARVACGVI 150
>pdb|1IBH|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant M41i
Length = 151
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 27/162 (16%)
Query: 45 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQ--- 101
TVK K P G + Q G I L L+ G HGFHIH G A +
Sbjct: 4 TVKMTDLQTGK--PVGTIELSQNKYGVVFIP-ELADLTPGIHGFHIHQNGSCASSEKDGK 60
Query: 102 -----STGDHFNPFRKH-HGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPN 155
+ G H++P + HG P H GDL ++V +G A + L P +
Sbjct: 61 VVLGGAAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPV-----LAPRLTLK 115
Query: 156 SIIGRSVVIH---DKHDDLGKVGNYHSKKNGNAGDKIACGVI 194
+ G +++IH D H D+ K G G ++ACGVI
Sbjct: 116 ELKGHAIMIHAGGDNHSDM-------PKALGGGGARVACGVI 150
>pdb|1IBF|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant V29g
Length = 151
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 27/162 (16%)
Query: 45 TVKAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAHFCQ--- 101
TVK K P G + Q G I L L+ G HGFHIH G A +
Sbjct: 4 TVKMTDLQTGK--PVGTIELSQNKYGVGFIP-ELADLTPGMHGFHIHQNGSCASSEKDGK 60
Query: 102 -----STGDHFNPFRKH-HGGPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPN 155
+ G H++P + HG P H GDL ++V +G A + L P +
Sbjct: 61 VVLGGAAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPV-----LAPRLTLK 115
Query: 156 SIIGRSVVIH---DKHDDLGKVGNYHSKKNGNAGDKIACGVI 194
+ G +++IH D H D+ K G G ++ACGVI
Sbjct: 116 ELKGHAIMIHAGGDNHSDM-------PKALGGGGARVACGVI 150
>pdb|2APS|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM ACTINOBACILLUS
Pleuropneumoniae
pdb|2APS|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM ACTINOBACILLUS
Pleuropneumoniae
Length = 162
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 59/133 (44%), Gaps = 31/133 (23%)
Query: 78 LYYLSQGAHGFHIHVYGDMAHFCQS------------TGDHFNPFR-KHHGGPEDWIRHA 124
L+ L+QG HGFHIH C+ G H++P K HG P H
Sbjct: 44 LHGLAQGLHGFHIH----QNPSCEPKEKDGKLVAGLGAGGHWDPKETKQHGYPWSDNAHL 99
Query: 125 GDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH---DKHDDLGKVGNYHSKK 181
GDL ++V DG A N V +L L + + G S++IH D H D H
Sbjct: 100 GDLPALFVEHDGSA-TNPVLAPRLKKL---DEVKGHSLMIHEGGDNHSD-------HPAP 148
Query: 182 NGNAGDKIACGVI 194
G G ++ACGVI
Sbjct: 149 LGGGGPRMACGVI 161
>pdb|2AQM|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM BRUCELLA ABORTUS
Length = 154
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 63/159 (39%), Gaps = 33/159 (20%)
Query: 47 KAVAYVISKWGPKGILHFKQEGDGPTTIKGTLYYLSQGAHGFHIHVYGDMAH-------- 98
K V V+ P G LHFK + L+ G HGFH+H A
Sbjct: 17 KEVGTVVISEAPGG-LHFKV----------NMEKLTPGYHGFHVHENPSCAPGEKDGKIV 65
Query: 99 FCQSTGDHFNPFRKHHG-GPEDWIRHAGDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSI 157
+ G H++P HH GPE H GDL + DGK +V H L I
Sbjct: 66 PALAAGGHYDPGNTHHHLGPE-GDGHMGDLPRLSANADGKVSETVVAPH----LKKLAEI 120
Query: 158 IGRSVVIHDKHDDLGKVGNYHSKKN--GNAGDKIACGVI 194
RS+++H D NY K G G + ACGVI
Sbjct: 121 KQRSLMVHVGGD------NYSDKPEPLGGGGARFACGVI 153
>pdb|2AQR|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
pdb|2AQR|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
pdb|2AQR|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
Length = 164
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 56/129 (43%), Gaps = 23/129 (17%)
Query: 78 LYYLSQGAHGFHIHVYGDMAHFCQS--------TGDHFNPF-RKHHGGPEDWIRHAGDLG 128
L LS+G HGFHIH Q G H++P K HG P H GDL
Sbjct: 46 LQGLSEGLHGFHIHENPSCEPKEQEGKLTAGLGAGGHWDPKGAKQHGYPWQDDAHLGDLP 105
Query: 129 NIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH---DKHDDLGKVGNYHSKKNGNA 185
+ V DG A N V +L L + + G S++IH D H D H G
Sbjct: 106 ALTVLHDGTA-TNPVLAPRLKHL---DDVRGHSIMIHTGGDNHSD-------HPAPLGGG 154
Query: 186 GDKIACGVI 194
G ++ACGVI
Sbjct: 155 GPRMACGVI 163
>pdb|2AQT|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
pdb|2AQT|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
pdb|2AQT|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
Length = 164
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 56/129 (43%), Gaps = 23/129 (17%)
Query: 78 LYYLSQGAHGFHIHVYGDMAHFCQS--------TGDHFNPF-RKHHGGPEDWIRHAGDLG 128
L LS+G HGFHIH Q G H++P K HG P H GDL
Sbjct: 46 LQGLSEGLHGFHIHENPSCEPKEQEGQLTAGLGAGGHWDPKGAKQHGYPWQDDAHLGDLP 105
Query: 129 NIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH---DKHDDLGKVGNYHSKKNGNA 185
+ V DG A N V +L L + + G S++IH D H D H G
Sbjct: 106 ALTVLHDGTA-TNPVLAPRLKHL---DDVRGHSIMIHTGGDNHSD-------HPAPLGGG 154
Query: 186 GDKIACGVI 194
G ++ACGVI
Sbjct: 155 GPRMACGVI 163
>pdb|2AQQ|A Chain A, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
pdb|2AQQ|B Chain B, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
pdb|2AQQ|C Chain C, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
Length = 164
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 56/129 (43%), Gaps = 23/129 (17%)
Query: 78 LYYLSQGAHGFHIHVYGDMAHFCQS--------TGDHFNPF-RKHHGGPEDWIRHAGDLG 128
L LS+G HGFHIH + G H++P K HG P H GDL
Sbjct: 46 LQGLSEGLHGFHIHENPSCEPKEEEGKLTAGLGAGGHWDPKGAKQHGYPWQDDAHLGDLP 105
Query: 129 NIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH---DKHDDLGKVGNYHSKKNGNA 185
+ V DG A N V +L L + + G S++IH D H D H G
Sbjct: 106 ALTVLHDGTA-TNPVLAPRLKHL---DDVRGHSIMIHTGGDNHSD-------HPAPLGGG 154
Query: 186 GDKIACGVI 194
G ++ACGVI
Sbjct: 155 GPRMACGVI 163
>pdb|2AQS|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91E, K94e Double Mutant
pdb|2AQS|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91E, K94e Double Mutant
Length = 164
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 56/129 (43%), Gaps = 23/129 (17%)
Query: 78 LYYLSQGAHGFHIHVYGDMAHFCQS--------TGDHFNPF-RKHHGGPEDWIRHAGDLG 128
L LS+G HGFHIH + G H++P K HG P H GDL
Sbjct: 46 LQGLSEGLHGFHIHENPSCEPKEEEGELTAGLGAGGHWDPKGAKQHGYPWQDDAHLGDLP 105
Query: 129 NIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH---DKHDDLGKVGNYHSKKNGNA 185
+ V DG A N V +L L + + G S++IH D H D H G
Sbjct: 106 ALTVLHDGTA-TNPVLAPRLKHL---DDVRGHSIMIHTGGDNHSD-------HPAPLGGG 154
Query: 186 GDKIACGVI 194
G ++ACGVI
Sbjct: 155 GPRMACGVI 163
>pdb|2AQN|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
pdb|2AQN|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
pdb|2AQN|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
Length = 164
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 56/129 (43%), Gaps = 23/129 (17%)
Query: 78 LYYLSQGAHGFHIHVYGDMAHFCQS--------TGDHFNPF-RKHHGGPEDWIRHAGDLG 128
L LS+G HGFHIH + G H++P K HG P H GDL
Sbjct: 46 LQGLSEGLHGFHIHENPSCEPKEKEGKLTAGLGAGGHWDPKGAKQHGYPWQDDAHLGDLP 105
Query: 129 NIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH---DKHDDLGKVGNYHSKKNGNA 185
+ V DG A N V +L L + + G S++IH D H D H G
Sbjct: 106 ALTVLHDGTA-TNPVLAPRLKHL---DDVRGHSIMIHTGGDNHSD-------HPAPLGGG 154
Query: 186 GDKIACGVI 194
G ++ACGVI
Sbjct: 155 GPRMACGVI 163
>pdb|1Z9P|A Chain A, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi
pdb|1Z9P|B Chain B, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi
Length = 155
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 31/133 (23%)
Query: 78 LYYLSQGAHGFHIHVYGDMAHFCQS------------TGDHFNPFR-KHHGGPEDWIRHA 124
L+ L+ G HGFHIH C+ G H++P + + HG P H
Sbjct: 37 LHDLAHGLHGFHIHEKPS----CEPKEKDGKLVAGLGAGGHWDPKQTQKHGYPWSDDAHM 92
Query: 125 GDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH---DKHDDLGKVGNYHSKK 181
GDL ++V DG A ++ +L L + G S++IH D H D H
Sbjct: 93 GDLPALFVMHDGSATTPVLAP-RLKKLA---EVKGHSLMIHAGGDNHSD-------HPAP 141
Query: 182 NGNAGDKIACGVI 194
G G ++ACGVI
Sbjct: 142 LGGGGPRMACGVI 154
>pdb|2K4W|A Chain A, The Solution Structure Of The Monomeric Copper, Zinc
Superox Dismutase From Salmonella Enterica
Length = 154
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 78 LYYLSQGAHGFHIHVYGD--------MAHFCQSTGDHFNPFRK-HHGGPEDWIRHAGDLG 128
L L G HGFHIH G A ++ G H +P H GPE H GDL
Sbjct: 37 LKALPPGEHGFHIHANGSCQPAIKDGQAVAAEAAGGHLDPQNTGKHEGPEGQ-GHLGDLP 95
Query: 129 NIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDK 188
+ V DG A V +L L + + ++++IH D++ + K G G +
Sbjct: 96 VLVVNNDGIA-TEPVTAPRLKSL---DEVKDKALMIHVGGDNM----SDQPKPLGGGGTR 147
Query: 189 IACGVI 194
ACGVI
Sbjct: 148 YACGVI 153
>pdb|1Z9N|A Chain A, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
pdb|1Z9N|B Chain B, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
pdb|1Z9N|C Chain C, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
pdb|1Z9N|D Chain D, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
Length = 177
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 31/133 (23%)
Query: 78 LYYLSQGAHGFHIHVYGDMAHFCQS------------TGDHFNPFR-KHHGGPEDWIRHA 124
L+ L+ G HGFHIH C+ G H++P + + HG P H
Sbjct: 59 LHDLAHGLHGFHIHEKPS----CEPKEKDGKLVAGLGAGGHWDPKQTQKHGYPWSDDAHM 114
Query: 125 GDLGNIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH---DKHDDLGKVGNYHSKK 181
GDL ++V DG A ++ +L L + G S++IH D H D H
Sbjct: 115 GDLPALFVMHDGSATTPVLAP-RLKKLA---EVKGHSLMIHAGGDNHSD-------HPAP 163
Query: 182 NGNAGDKIACGVI 194
G G ++ACGVI
Sbjct: 164 LGGGGPRMACGVI 176
>pdb|2AQP|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS E73A
MUTANT
pdb|2AQP|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS E73A
MUTANT
Length = 164
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 55/129 (42%), Gaps = 23/129 (17%)
Query: 78 LYYLSQGAHGFHIHVYGDMAHFCQS--------TGDHFNPF-RKHHGGPEDWIRHAGDLG 128
L LS G HGFHIH + G H++P K HG P H GDL
Sbjct: 46 LQGLSAGLHGFHIHENPSCEPKEKEGKLTAGLGAGGHWDPKGAKQHGYPWQDDAHLGDLP 105
Query: 129 NIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIH---DKHDDLGKVGNYHSKKNGNA 185
+ V DG A N V +L L + + G S++IH D H D H G
Sbjct: 106 ALTVLHDGTA-TNPVLAPRLKHL---DDVRGHSIMIHTGGDNHSD-------HPAPLGGG 154
Query: 186 GDKIACGVI 194
G ++ACGVI
Sbjct: 155 GPRMACGVI 163
>pdb|1EQW|A Chain A, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|B Chain B, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|C Chain C, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|D Chain D, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
Length = 156
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 53/133 (39%), Gaps = 31/133 (23%)
Query: 78 LYYLSQGAHGFHIHVYGDMAHFCQS--------TGDHFNPFRK-HHGGPEDWIRHAGDLG 128
L L+ G HGFH+H + G H +P + H GP + H GDL
Sbjct: 37 LNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLP 96
Query: 129 NIYVGFDGKAKINIVDKHKLIPLVGP-----NSIIGRSVVIHDKHDDLGKVGNYHSKKN- 182
+ V DG A PL+ P + + G S++IH D NY K
Sbjct: 97 GLVVNADGTAT---------YPLLAPRLKSLSELKGHSLMIHKGGD------NYSDKPAP 141
Query: 183 -GNAGDKIACGVI 194
G G + ACGVI
Sbjct: 142 LGGGGARFACGVI 154
>pdb|2WWN|A Chain A, Yersinia Pseudotuberculosis Superoxide Dismutase C With
Bound Azide
pdb|2WWN|B Chain B, Yersinia Pseudotuberculosis Superoxide Dismutase C With
Bound Azide
pdb|2WWO|A Chain A, Yersinia Pseudotuberculosis Superoxide Dismutase C
pdb|2WWO|B Chain B, Yersinia Pseudotuberculosis Superoxide Dismutase C
Length = 169
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 17/126 (13%)
Query: 78 LYYLSQGAHGFHIHVYGDMAHFCQ--------STGDHFNPFRKH-HGGPEDWIRHAGDLG 128
L L+ G HGFH+H A + + G H +P + H GP + H GDL
Sbjct: 51 LTGLAPGIHGFHLHEKPSCAPGMKDGKAVPALAAGGHLDPNKTGVHLGPYNDKGHLGDLP 110
Query: 129 NIYVGFDGKAKINIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDK 188
+ V DG A ++ L + + +++IH D+ H G G +
Sbjct: 111 GLVVNADGTATYPVLAPR----LKSLSEVKQHALMIHAGGDNYSD----HPMPLGGGGAR 162
Query: 189 IACGVI 194
+ACGVI
Sbjct: 163 MACGVI 168
>pdb|1PZS|A Chain A, Crystal Structure Of A Cu-Zn Superoxide Dismutase From
Mycobacterium Tuberculosis At 1.63 Resolution
Length = 208
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 22/134 (16%)
Query: 81 LSQGAHGFHIHVYG-----DMAHFCQSTGDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFD 135
L+ G HG HIH G +A + G+ + +H +GDL ++ V D
Sbjct: 76 LTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGD 135
Query: 136 GKAK-INIVDKHKLIPLVGPNSIIGRSVVIHDKHDDLGKVG-------------NYHSKK 181
G A + D + L+ S +++IH D+ + + +
Sbjct: 136 GSAMLVTTTDAFTMDDLL---SGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLT 192
Query: 182 NGNAGDKIACGVIG 195
G+AG ++ACGVIG
Sbjct: 193 TGDAGKRVACGVIG 206
>pdb|2EXR|A Chain A, X-Ray Structure Of Cytokinin OxidaseDEHYDROGENASE (CKX)
FROM Arabidopsis Thaliana At5g21482
pdb|2Q4W|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Cytokinin OxidaseDEHYDROGENASE (CKX) FROM ARABIDOPSIS
THALIANA AT5G21482
Length = 524
Score = 30.0 bits (66), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 95 DMAHFCQSTGDHFNPFRKHHGGPEDWIRHAGDLGNIYVGFDGKAKIN 141
++ H+C G + + H+ E+WIRH G+ + +V D KA +
Sbjct: 464 EIVHWCVKNGIDYKLYLPHYKSQEEWIRHFGNRWSRFV--DRKAXFD 508
>pdb|2QF4|A Chain A, High Resolution Structure Of The Major Periplasmic Domain
From The Cell Shape-determining Filament Mrec
(orthorhombic Form)
pdb|2QF4|B Chain B, High Resolution Structure Of The Major Periplasmic Domain
From The Cell Shape-determining Filament Mrec
(orthorhombic Form)
pdb|2QF5|A Chain A, High Resolution Structure Of The Major Periplasmic Domain
From The Cell Shape-determining Filament Mrec
(monoclinic Form)
Length = 172
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 165 HDKHDDLGKVGNYHSKKNGNAGDKIACGVIG 195
+DK +D+ K+ +S + +AGDK+ G +G
Sbjct: 91 YDKENDVLKISQLNSNSDISAGDKVTTGGLG 121
>pdb|1UIM|A Chain A, Crystal Structure Of Threonine Synthase From Thermus
Thermophilus Hb8, Orthorhombic Crystal Form
pdb|1UIM|B Chain B, Crystal Structure Of Threonine Synthase From Thermus
Thermophilus Hb8, Orthorhombic Crystal Form
pdb|1UIN|A Chain A, Crystal Structure Of Threonine Synthase From Thermus
Thermophilus Hb8, Trigonal Crystal Form
pdb|1UIN|B Chain B, Crystal Structure Of Threonine Synthase From Thermus
Thermophilus Hb8, Trigonal Crystal Form
pdb|1V7C|A Chain A, Crystal Structure Of Threonine Synthase From Thermus
Thermophilus Hb8 In Complex With A Substrate Analogue
pdb|1V7C|B Chain B, Crystal Structure Of Threonine Synthase From Thermus
Thermophilus Hb8 In Complex With A Substrate Analogue
pdb|1V7C|C Chain C, Crystal Structure Of Threonine Synthase From Thermus
Thermophilus Hb8 In Complex With A Substrate Analogue
pdb|1V7C|D Chain D, Crystal Structure Of Threonine Synthase From Thermus
Thermophilus Hb8 In Complex With A Substrate Analogue
pdb|3AEX|A Chain A, Catalytic Intermediate Analogue Of Threonine Synthase From
Thermus Thermophilus Hb8
pdb|3AEX|B Chain B, Catalytic Intermediate Analogue Of Threonine Synthase From
Thermus Thermophilus Hb8
pdb|3AEY|A Chain A, Apo Form Of Threonine Synthase From Thermus Thermophilus
Hb8
pdb|3AEY|B Chain B, Apo Form Of Threonine Synthase From Thermus Thermophilus
Hb8
Length = 351
Score = 26.9 bits (58), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 148 LIPLVGPNSIIGRSVVIHDKHDDLGKVGNYHSKKNGNAGDKIA 190
L+ V P+ + G+ + + D+LG +YH+ GNAG+ A
Sbjct: 152 LVNSVNPHRLEGQKTLAFEVVDELGDAPHYHALPVGNAGNITA 194
>pdb|2QPM|A Chain A, Leu492ala Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE
COMPLEXED With Benzylurea Inhibitor Cpbu
pdb|3KJM|A Chain A, Leu492ala Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE
COMPLEXED With Phenylurea Inhibitor Cppu
Length = 516
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 98 HFCQSTGDHFNPFRKHHGGPEDWIRHAG 125
FC G + + H DW+RH G
Sbjct: 461 RFCDLAGIQYKTYAARHTDRSDWVRHFG 488
>pdb|1W1O|A Chain A, Native Cytokinin Dehydrogenase
pdb|1W1Q|A Chain A, Plant Cytokinin Dehydrogenase In Complex With
Isopentenyladenine
pdb|1W1R|A Chain A, Plant Cytokinin Dehydrogenase In Complex With Trans-zeatin
pdb|1W1S|A Chain A, Plant Cytokinin Dehydrogenase In Complex With
Benzylaminopurine
Length = 534
Score = 26.6 bits (57), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 98 HFCQSTGDHFNPFRKHHGGPEDWIRHAG 125
FC G + + H DW+RH G
Sbjct: 479 RFCDLAGIQYKTYLARHTDRSDWVRHFG 506
>pdb|4HL7|A Chain A, Crystal Structure Of Nicotinate Phosphoribosyltransferase
(Target Nysgr-026035) From Vibrio Cholerae
pdb|4HL7|B Chain B, Crystal Structure Of Nicotinate Phosphoribosyltransferase
(Target Nysgr-026035) From Vibrio Cholerae
Length = 446
Score = 26.6 bits (57), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 55 KWGPKGILHFKQEGDGPTTIKGTLYYLSQG 84
+WG K I H++Q G PTT L+ S G
Sbjct: 300 RWGDKXIAHYQQLGIDPTT---KLFIFSDG 326
>pdb|3S1E|A Chain A, Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE
COMPLEXED With N6-Isopentenyladenine
Length = 516
Score = 26.6 bits (57), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 98 HFCQSTGDHFNPFRKHHGGPEDWIRHAG 125
FC G + + H DW+RH G
Sbjct: 461 RFCDLAGIQYKTYLARHTDRSDWVRHFG 488
>pdb|3S1F|A Chain A, Asp169glu Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE
COMPLEXED With N6-Isopentenyladenine
Length = 516
Score = 26.6 bits (57), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 98 HFCQSTGDHFNPFRKHHGGPEDWIRHAG 125
FC G + + H DW+RH G
Sbjct: 461 RFCDLAGIQYKTYLARHTDRSDWVRHFG 488
>pdb|2QKN|A Chain A, Crystal Structure Of Maize Cytokinin OxidaseDEHYDROGENASE
COMPLEXED With Phenylurea Inhibitor Cppu
pdb|3BW7|A Chain A, Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED WITH THE
ALLENIC Cytokinin Analog Ha-1
pdb|3C0P|A Chain A, Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED WITH THE
ALLENIC Cytokinin Analog Ha-8
pdb|3DQ0|A Chain A, Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED WITH
N6-(3-Methoxy- Phenyl)adenine
pdb|3S1C|A Chain A, Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED WITH N6-
Isopentenyladenosine
Length = 516
Score = 26.6 bits (57), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 98 HFCQSTGDHFNPFRKHHGGPEDWIRHAG 125
FC G + + H DW+RH G
Sbjct: 461 RFCDLAGIQYKTYLARHTDRSDWVRHFG 488
>pdb|3S1D|A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE
COMPLEXED With N6-Isopentenyladenosine
Length = 516
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 98 HFCQSTGDHFNPFRKHHGGPEDWIRHAG 125
FC G + + H DW+RH G
Sbjct: 461 RFCDLAGIQYKTYLARHTDRSDWVRHFG 488
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.142 0.453
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,819,185
Number of Sequences: 62578
Number of extensions: 309047
Number of successful extensions: 760
Number of sequences better than 100.0: 127
Number of HSP's better than 100.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 481
Number of HSP's gapped (non-prelim): 133
length of query: 198
length of database: 14,973,337
effective HSP length: 94
effective length of query: 104
effective length of database: 9,091,005
effective search space: 945464520
effective search space used: 945464520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)