Query 037042
Match_columns 1002
No_of_seqs 997 out of 6471
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 13:22:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037042.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037042hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 5.3E-86 1.8E-90 821.9 36.4 626 2-643 4-753 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.7E-67 6E-72 655.4 31.1 541 53-605 100-742 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 2.3E-62 7.8E-67 604.0 42.1 550 53-609 25-627 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 2.9E-59 1E-63 576.3 40.2 564 57-630 8-625 (680)
5 4eco_A Uncharacterized protein 100.0 3.4E-61 1.2E-65 585.1 22.2 494 5-605 25-601 (636)
6 3t6q_A CD180 antigen; protein- 100.0 6.6E-59 2.3E-63 565.4 33.9 516 54-609 34-565 (606)
7 3vq2_A TLR4, TOLL-like recepto 100.0 2.2E-58 7.4E-63 560.9 34.3 512 54-609 33-563 (606)
8 4ecn_A Leucine-rich repeat pro 100.0 2.5E-58 8.5E-63 567.7 28.5 513 4-604 263-864 (876)
9 3t6q_A CD180 antigen; protein- 100.0 3E-57 1E-61 550.9 35.7 530 57-629 16-562 (606)
10 3j0a_A TOLL-like receptor 5; m 100.0 7E-57 2.4E-61 565.9 37.6 521 41-610 14-566 (844)
11 3vq2_A TLR4, TOLL-like recepto 100.0 5.8E-56 2E-60 539.5 30.1 488 53-584 56-562 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 2.4E-53 8.4E-58 533.7 37.8 486 53-584 48-564 (844)
13 2z81_A CD282 antigen, TOLL-lik 100.0 2E-53 7E-58 510.8 23.7 497 40-609 3-515 (549)
14 2z63_A TOLL-like receptor 4, v 100.0 2.3E-52 7.9E-57 504.2 32.2 492 54-611 29-538 (570)
15 4asz_A BDNF/NT-3 growth factor 100.0 4.7E-53 1.6E-57 459.4 11.2 259 706-991 13-290 (299)
16 4aoj_A High affinity nerve gro 100.0 1.8E-52 6.2E-57 461.2 14.9 259 706-991 41-320 (329)
17 2z63_A TOLL-like receptor 4, v 100.0 8.6E-51 2.9E-55 490.4 30.9 467 53-585 52-536 (570)
18 3omv_A RAF proto-oncogene seri 100.0 4.2E-52 1.4E-56 451.5 16.1 263 705-992 35-302 (307)
19 4gt4_A Tyrosine-protein kinase 100.0 2E-52 6.7E-57 456.5 12.8 257 707-990 27-306 (308)
20 4g8a_A TOLL-like receptor 4; l 100.0 3.2E-49 1.1E-53 483.2 33.6 512 55-608 54-584 (635)
21 4fih_A Serine/threonine-protei 100.0 5.6E-51 1.9E-55 447.9 13.5 252 706-986 74-326 (346)
22 2z7x_B TOLL-like receptor 1, v 100.0 5.9E-50 2E-54 477.1 23.2 458 56-609 3-486 (520)
23 2z81_A CD282 antigen, TOLL-lik 100.0 7.3E-50 2.5E-54 479.9 24.2 481 41-584 12-514 (549)
24 4b9d_A Serine/threonine-protei 100.0 5.4E-51 1.9E-55 448.7 10.2 252 705-985 23-278 (350)
25 4aw0_A HPDK1, 3-phosphoinositi 100.0 8.5E-51 2.9E-55 439.7 11.2 250 706-984 32-285 (311)
26 4g3f_A NF-kappa-beta-inducing 100.0 2.6E-50 9.1E-55 441.4 15.3 253 706-989 58-315 (336)
27 3hmm_A TGF-beta receptor type- 100.0 1E-50 3.5E-55 444.5 11.0 274 706-992 3-299 (303)
28 3fpq_A Serine/threonine-protei 100.0 8.5E-50 2.9E-54 430.3 15.4 251 709-986 29-285 (290)
29 4eco_A Uncharacterized protein 100.0 5.9E-49 2E-53 477.5 24.2 381 232-630 192-603 (636)
30 4ase_A Vascular endothelial gr 100.0 3.9E-50 1.3E-54 446.1 11.9 268 699-991 57-348 (353)
31 4fie_A Serine/threonine-protei 100.0 8.8E-50 3E-54 449.2 13.5 252 706-986 151-403 (423)
32 3hyh_A Carbon catabolite-derep 100.0 2.3E-49 7.9E-54 422.9 14.3 248 706-986 13-265 (275)
33 3ubd_A Ribosomal protein S6 ki 100.0 1.8E-49 6.1E-54 429.7 6.6 250 706-986 24-284 (304)
34 4ecn_A Leucine-rich repeat pro 100.0 2.9E-47 9.9E-52 469.3 26.7 456 126-607 323-843 (876)
35 4g8a_A TOLL-like receptor 4; l 100.0 1.7E-46 5.8E-51 459.1 32.9 487 54-582 77-582 (635)
36 2z7x_B TOLL-like receptor 1, v 100.0 1.6E-47 5.3E-52 456.2 23.0 438 53-582 21-483 (520)
37 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.4E-47 4.7E-52 460.6 22.2 462 79-610 33-516 (562)
38 4g31_A Eukaryotic translation 100.0 1.2E-47 4.1E-52 417.7 14.2 264 706-995 5-290 (299)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.1E-46 3.1E-50 444.7 23.7 459 56-584 34-514 (562)
40 1ogq_A PGIP-2, polygalacturona 100.0 9.1E-45 3.1E-49 401.4 22.0 296 6-334 2-306 (313)
41 4b99_A Mitogen-activated prote 100.0 2.6E-45 8.7E-50 414.7 12.8 275 705-986 53-347 (398)
42 3v47_A TOLL-like receptor 5B a 100.0 1.3E-43 4.3E-48 415.1 27.2 385 61-536 18-412 (455)
43 4f9c_A Cell division cycle 7-r 100.0 6.3E-45 2.2E-49 407.4 15.3 271 703-986 18-355 (361)
44 1jl5_A Outer protein YOPM; leu 100.0 1.9E-43 6.4E-48 410.4 24.5 401 101-609 11-416 (454)
45 1jl5_A Outer protein YOPM; leu 100.0 3.3E-43 1.1E-47 408.3 25.8 419 53-609 11-434 (454)
46 3uto_A Twitchin; kinase, muscl 100.0 4E-44 1.4E-48 425.4 14.8 255 705-986 156-413 (573)
47 3v47_A TOLL-like receptor 5B a 100.0 1E-42 3.6E-47 407.3 24.2 378 214-612 24-416 (455)
48 3v5w_A G-protein coupled recep 100.0 1.5E-43 5.2E-48 415.4 16.3 252 705-986 188-452 (689)
49 2qkw_B Protein kinase; three-h 100.0 1.4E-42 4.9E-47 386.2 17.4 281 698-991 31-316 (321)
50 3soc_A Activin receptor type-2 100.0 9.3E-43 3.2E-47 387.6 12.3 280 705-991 23-319 (322)
51 3bz5_A Internalin-J, INLJ; leu 100.0 3.1E-41 1.1E-45 392.0 25.4 364 66-539 31-394 (457)
52 3uim_A Brassinosteroid insensi 100.0 5.2E-42 1.8E-46 382.7 16.2 287 692-989 16-310 (326)
53 3s95_A LIMK-1, LIM domain kina 100.0 4.9E-42 1.7E-46 379.9 15.1 267 705-996 9-288 (310)
54 3fxz_A Serine/threonine-protei 100.0 1.7E-41 5.8E-46 372.7 14.8 253 705-986 19-272 (297)
55 2nru_A Interleukin-1 receptor- 100.0 3.3E-40 1.1E-44 364.8 24.6 282 692-990 11-306 (307)
56 3bz5_A Internalin-J, INLJ; leu 100.0 2.9E-40 9.8E-45 383.9 25.2 371 82-610 23-393 (457)
57 2psq_A Fibroblast growth facto 100.0 2.7E-41 9.3E-46 382.6 15.6 261 705-992 80-366 (370)
58 3fe3_A MAP/microtubule affinit 100.0 3.1E-41 1E-45 375.1 15.5 250 705-986 14-267 (328)
59 3q4u_A Activin receptor type-1 100.0 8.1E-41 2.8E-45 368.5 18.3 270 705-989 7-301 (301)
60 3p86_A Serine/threonine-protei 100.0 4.5E-41 1.6E-45 371.2 14.9 263 705-996 36-304 (309)
61 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.7E-41 1.3E-45 364.5 13.3 259 705-992 7-266 (268)
62 3cbl_A C-FES, proto-oncogene t 100.0 8.9E-42 3E-46 388.1 8.4 259 705-990 113-374 (377)
63 3kul_A Ephrin type-A receptor 100.0 5.8E-41 2E-45 373.3 14.5 262 706-994 49-317 (325)
64 3zgw_A Maternal embryonic leuc 100.0 6E-41 2E-45 374.8 14.3 256 704-989 8-266 (347)
65 2c30_A Serine/threonine-protei 100.0 1.6E-40 5.4E-45 369.1 17.2 265 694-987 23-298 (321)
66 4hcu_A Tyrosine-protein kinase 100.0 4.9E-41 1.7E-45 363.8 12.4 258 705-991 9-267 (269)
67 1tki_A Titin; serine kinase, m 100.0 1.1E-40 3.9E-45 369.9 14.6 255 705-987 4-261 (321)
68 2yab_A Death-associated protei 100.0 2.2E-40 7.4E-45 372.7 16.5 254 705-986 11-275 (361)
69 3ugc_A Tyrosine-protein kinase 100.0 1.9E-40 6.7E-45 364.3 15.7 273 705-992 9-293 (295)
70 3lb7_A RAF proto-oncogene seri 100.0 2.2E-40 7.5E-45 365.5 16.2 264 705-993 35-303 (307)
71 1o6l_A RAC-beta serine/threoni 100.0 2E-40 6.8E-45 369.5 15.4 251 705-986 4-263 (337)
72 3vhe_A Vascular endothelial gr 100.0 4.6E-41 1.6E-45 380.5 10.3 271 696-991 12-356 (359)
73 1o6v_A Internalin A; bacterial 100.0 7.3E-39 2.5E-43 375.2 29.4 212 76-362 45-256 (466)
74 3tki_A Serine/threonine-protei 100.0 1.5E-40 5.3E-45 369.4 13.7 257 705-987 6-265 (323)
75 3niz_A Rhodanese family protei 100.0 2.7E-40 9.3E-45 365.6 15.2 270 705-986 20-303 (311)
76 4aw2_A Serine/threonine-protei 100.0 6.2E-41 2.1E-45 385.4 10.3 265 698-986 66-341 (437)
77 1o6v_A Internalin A; bacterial 100.0 9.8E-39 3.4E-43 374.1 29.0 217 292-557 173-389 (466)
78 4eqm_A Protein kinase; transfe 100.0 3.2E-40 1.1E-44 362.1 15.2 270 705-999 10-284 (294)
79 3gen_A Tyrosine-protein kinase 100.0 1.5E-40 5.1E-45 362.9 12.5 259 705-992 23-282 (283)
80 3tt0_A Basic fibroblast growth 100.0 2.5E-40 8.7E-45 376.9 14.8 267 705-998 68-360 (382)
81 2qol_A Ephrin receptor; recept 100.0 1.2E-40 4E-45 377.6 11.5 259 705-990 44-309 (373)
82 3l9p_A Anaplastic lymphoma kin 100.0 8.1E-41 2.8E-45 378.5 9.7 258 706-990 71-345 (367)
83 1luf_A Muscle-specific tyrosin 100.0 2.4E-40 8.1E-45 372.1 13.0 264 704-994 45-339 (343)
84 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.5E-40 5E-45 373.1 10.9 251 705-986 22-283 (353)
85 3mdy_A Bone morphogenetic prot 100.0 2.5E-39 8.5E-44 362.8 20.7 271 703-991 34-332 (337)
86 4f0f_A Serine/threonine-protei 100.0 9.7E-40 3.3E-44 357.2 16.4 253 705-988 18-287 (287)
87 2y0a_A Death-associated protei 100.0 7.1E-40 2.4E-44 364.7 15.3 253 706-986 11-274 (326)
88 3poz_A Epidermal growth factor 100.0 1.8E-40 6.3E-45 369.9 10.3 258 705-990 14-278 (327)
89 1fot_A TPK1 delta, CAMP-depend 100.0 8.8E-40 3E-44 361.7 15.6 248 705-986 5-261 (318)
90 3h4j_B AMPK kdaid, SNF1-like p 100.0 6.5E-40 2.2E-44 365.0 14.6 249 705-986 8-261 (336)
91 3op5_A Serine/threonine-protei 100.0 4.8E-40 1.6E-44 372.4 13.6 273 705-991 34-330 (364)
92 3soa_A Calcium/calmodulin-depe 100.0 9.1E-40 3.1E-44 377.3 15.7 255 705-986 10-270 (444)
93 1kob_A Twitchin; kinase, intra 100.0 8.6E-40 2.9E-44 371.1 15.0 255 705-986 50-307 (387)
94 3qup_A Tyrosine-protein kinase 100.0 8.1E-40 2.8E-44 364.4 14.3 265 705-992 22-300 (323)
95 4dc2_A Protein kinase C IOTA t 100.0 6.8E-40 2.3E-44 371.7 13.9 256 705-985 51-320 (396)
96 1qcf_A Haematopoetic cell kina 100.0 3E-40 1E-44 384.9 11.1 259 705-993 187-447 (454)
97 2bdw_A Hypothetical protein K1 100.0 1.2E-39 4E-44 367.9 15.5 254 705-986 28-287 (362)
98 2ivs_A Proto-oncogene tyrosine 100.0 5.5E-40 1.9E-44 364.2 12.6 259 705-990 22-311 (314)
99 4euu_A Serine/threonine-protei 100.0 3.4E-39 1.2E-43 358.6 18.7 276 705-989 8-308 (319)
100 3c0i_A Peripheral plasma membr 100.0 4E-40 1.4E-44 370.6 11.3 254 706-986 24-289 (351)
101 1xjd_A Protein kinase C, theta 100.0 4.6E-40 1.6E-44 367.6 11.4 251 703-984 14-270 (345)
102 1rjb_A FL cytokine receptor; k 100.0 6.6E-40 2.2E-44 368.6 12.6 262 705-992 44-336 (344)
103 2eva_A TAK1 kinase - TAB1 chim 100.0 2.4E-39 8.1E-44 357.5 16.5 258 706-995 8-268 (307)
104 2x4f_A Myosin light chain kina 100.0 1.3E-39 4.5E-44 368.8 14.7 250 710-986 93-345 (373)
105 3og7_A AKAP9-BRAF fusion prote 100.0 1.1E-39 3.7E-44 357.1 13.4 261 705-990 23-288 (289)
106 1t46_A HOMO sapiens V-KIT hard 100.0 7.7E-40 2.6E-44 362.9 12.3 262 705-992 22-309 (313)
107 2id5_A Lingo-1, leucine rich r 100.0 4.7E-39 1.6E-43 378.5 19.8 329 272-631 32-360 (477)
108 1ob3_A PFPK5, cell division co 100.0 8.9E-40 3E-44 357.6 12.6 270 706-986 2-283 (288)
109 2izr_A Casein kinase I isoform 100.0 1E-39 3.5E-44 364.5 13.0 262 705-990 8-281 (330)
110 1mp8_A Focal adhesion kinase 1 100.0 1.2E-39 4.2E-44 355.2 13.2 257 705-990 14-276 (281)
111 3dtc_A Mitogen-activated prote 100.0 1.2E-39 4E-44 353.4 12.9 251 705-988 6-271 (271)
112 3o0g_A Cell division protein k 100.0 1.3E-39 4.5E-44 357.1 13.5 271 706-986 2-285 (292)
113 3t9t_A Tyrosine-protein kinase 100.0 1E-39 3.5E-44 353.0 12.4 258 705-991 7-265 (267)
114 3v8s_A RHO-associated protein 100.0 2.2E-40 7.7E-45 377.9 7.5 260 700-986 63-332 (410)
115 3kex_A Receptor tyrosine-prote 100.0 3.3E-40 1.1E-44 367.6 8.5 258 705-990 12-276 (325)
116 3a8x_A Protein kinase C IOTA t 100.0 2.7E-39 9.1E-44 362.2 15.8 256 706-986 9-278 (345)
117 1k9a_A Carboxyl-terminal SRC k 100.0 1.3E-39 4.5E-44 378.8 13.7 254 705-992 192-447 (450)
118 1csn_A Casein kinase-1; phosph 100.0 2.5E-39 8.5E-44 356.1 15.2 264 705-991 9-284 (298)
119 2zv2_A Calcium/calmodulin-depe 100.0 1.8E-39 6.1E-44 357.2 13.7 254 705-986 12-295 (298)
120 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.6E-39 5.5E-44 364.5 13.5 248 705-986 40-296 (350)
121 4fr4_A YANK1, serine/threonine 100.0 4.1E-39 1.4E-43 364.2 16.9 250 706-984 15-272 (384)
122 3gni_B Strad alpha; kinase fol 100.0 2.6E-39 8.7E-44 370.0 15.3 277 705-989 24-341 (389)
123 3g2f_A Bone morphogenetic prot 100.0 1.4E-39 4.9E-44 364.6 12.9 286 705-999 12-327 (336)
124 3lxl_A Tyrosine-protein kinase 100.0 6.2E-40 2.1E-44 365.9 9.8 276 706-992 23-305 (327)
125 3a62_A Ribosomal protein S6 ki 100.0 2.1E-39 7.1E-44 361.1 13.9 251 705-986 16-279 (327)
126 2vd5_A DMPK protein; serine/th 100.0 5.9E-40 2E-44 374.7 9.5 270 698-993 53-336 (412)
127 3ork_A Serine/threonine protei 100.0 5.2E-40 1.8E-44 363.7 8.6 272 705-997 11-288 (311)
128 2i0e_A Protein kinase C-beta I 100.0 2E-39 6.9E-44 363.6 13.5 251 704-985 18-278 (353)
129 2pvf_A Fibroblast growth facto 100.0 2.7E-39 9.2E-44 361.8 14.4 261 705-992 34-320 (334)
130 3p1a_A MYT1 kinase, membrane-a 100.0 2.1E-39 7.2E-44 358.6 12.8 247 706-986 57-307 (311)
131 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.2E-39 3.9E-44 379.4 11.1 258 705-992 183-442 (452)
132 1opk_A P150, C-ABL, proto-onco 100.0 1.5E-39 5.2E-44 382.4 12.2 257 705-990 219-478 (495)
133 1b6c_B TGF-B superfamily recep 100.0 1.4E-38 4.6E-43 357.6 19.4 280 698-992 34-338 (342)
134 3qd2_B Eukaryotic translation 100.0 3.2E-39 1.1E-43 361.0 14.2 255 705-984 5-326 (332)
135 2xir_A Vascular endothelial gr 100.0 1.3E-39 4.4E-44 361.6 10.9 271 696-991 17-311 (316)
136 3lxp_A Non-receptor tyrosine-p 100.0 1.7E-39 5.7E-44 360.7 11.5 277 708-997 33-317 (318)
137 2pmi_A Negative RE, cyclin-dep 100.0 2.2E-39 7.4E-44 359.6 12.2 271 705-986 4-296 (317)
138 2buj_A Serine/threonine-protei 100.0 2.2E-39 7.5E-44 359.9 12.2 271 705-996 28-312 (317)
139 1p4o_A Insulin-like growth fac 100.0 1.1E-39 3.7E-44 363.2 9.8 263 704-993 23-302 (322)
140 2y94_A 5'-AMP-activated protei 100.0 4.9E-39 1.7E-43 373.4 15.6 250 705-986 15-269 (476)
141 3c1x_A Hepatocyte growth facto 100.0 1.5E-39 5.1E-44 368.1 10.8 263 707-995 90-360 (373)
142 2w4o_A Calcium/calmodulin-depe 100.0 1.9E-39 6.6E-44 364.5 11.4 253 705-986 52-308 (349)
143 4fvq_A Tyrosine-protein kinase 100.0 1E-39 3.4E-44 357.5 8.9 255 705-993 7-278 (289)
144 3uc3_A Serine/threonine-protei 100.0 3.8E-39 1.3E-43 363.7 13.8 256 705-987 19-278 (361)
145 3lzb_A Epidermal growth factor 100.0 1.8E-39 6.3E-44 361.5 10.9 258 705-990 14-278 (327)
146 3cc6_A Protein tyrosine kinase 100.0 2.8E-39 9.7E-44 352.4 12.0 258 705-991 11-274 (281)
147 4e5w_A Tyrosine-protein kinase 100.0 3.4E-39 1.2E-43 355.7 12.7 273 706-989 21-301 (302)
148 3kmu_A ILK, integrin-linked ki 100.0 4.2E-39 1.4E-43 348.9 13.0 254 705-990 9-270 (271)
149 3f3z_A Calcium/calmodulin-depe 100.0 9.2E-39 3.1E-43 347.5 15.4 253 705-986 8-264 (277)
150 3llt_A Serine/threonine kinase 100.0 3.5E-39 1.2E-43 365.1 12.5 279 692-985 21-357 (360)
151 3brb_A Proto-oncogene tyrosine 100.0 1E-38 3.4E-43 353.9 15.6 266 704-992 32-310 (313)
152 1qpc_A LCK kinase; alpha beta 100.0 6.4E-39 2.2E-43 349.2 13.8 260 705-994 12-273 (279)
153 3dbq_A Dual specificity protei 100.0 3E-39 1E-43 362.7 11.3 255 705-987 8-277 (343)
154 3f66_A Hepatocyte growth facto 100.0 6.9E-39 2.3E-43 352.5 13.9 263 706-994 25-295 (298)
155 3gxj_A TGF-beta receptor type- 100.0 1.7E-40 5.7E-45 366.4 1.0 272 706-992 3-299 (303)
156 3oz6_A Mitogen-activated prote 100.0 1.3E-38 4.3E-43 364.0 16.6 278 704-990 7-337 (388)
157 3kn6_A Ribosomal protein S6 ki 100.0 4.8E-39 1.6E-43 357.7 12.7 251 711-986 16-273 (325)
158 2yex_A Serine/threonine-protei 100.0 1.3E-38 4.5E-43 346.1 15.8 256 705-986 6-264 (276)
159 1nxk_A MAP kinase-activated pr 100.0 5.1E-39 1.8E-43 367.5 13.1 260 705-990 60-328 (400)
160 1u59_A Tyrosine-protein kinase 100.0 8E-39 2.7E-43 349.9 14.0 258 706-991 9-273 (287)
161 3cok_A Serine/threonine-protei 100.0 8.5E-39 2.9E-43 348.0 14.2 252 705-986 10-265 (278)
162 2a2a_A Death-associated protei 100.0 1.5E-38 5.1E-43 353.6 16.4 254 705-986 11-275 (321)
163 3fdn_A Serine/threonine-protei 100.0 9.8E-39 3.3E-43 347.7 14.2 249 705-986 8-260 (279)
164 3hko_A Calcium/calmodulin-depe 100.0 9.9E-39 3.4E-43 359.2 14.6 260 703-986 23-333 (345)
165 4agu_A Cyclin-dependent kinase 100.0 1.5E-38 5.2E-43 352.1 15.7 265 706-984 3-285 (311)
166 1mqb_A Ephrin type-A receptor 100.0 1E-38 3.5E-43 356.6 14.3 258 706-990 44-309 (333)
167 2zmd_A Dual specificity protei 100.0 7.2E-39 2.4E-43 365.3 13.3 253 706-986 56-323 (390)
168 4ejn_A RAC-alpha serine/threon 100.0 2.9E-39 1E-43 376.0 10.1 251 705-986 147-407 (446)
169 3kk8_A Calcium/calmodulin depe 100.0 2E-38 6.8E-43 346.3 16.1 254 705-986 5-264 (284)
170 1u5q_A Serine/threonine protei 100.0 7.9E-39 2.7E-43 359.0 13.2 251 706-989 54-311 (348)
171 3ttj_A Mitogen-activated prote 100.0 1.2E-38 4.2E-43 370.9 15.3 271 705-986 61-358 (464)
172 2r5t_A Serine/threonine-protei 100.0 4.5E-39 1.5E-43 363.3 11.2 249 705-984 37-294 (373)
173 3dls_A PAS domain-containing s 100.0 5.3E-39 1.8E-43 358.8 11.3 244 705-986 23-277 (335)
174 2eue_A Carbon catabolite derep 100.0 8.2E-39 2.8E-43 347.5 12.3 249 705-986 12-265 (275)
175 2wqm_A Serine/threonine-protei 100.0 7.3E-39 2.5E-43 354.4 12.2 264 705-994 31-301 (310)
176 2v62_A Serine/threonine-protei 100.0 1.2E-38 4E-43 358.2 13.7 271 705-990 36-328 (345)
177 3pls_A Macrophage-stimulating 100.0 1.6E-38 5.3E-43 349.7 14.4 264 707-995 22-292 (298)
178 2acx_A G protein-coupled recep 100.0 1E-38 3.5E-43 375.1 13.6 255 705-986 183-447 (576)
179 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.4E-38 1.2E-42 357.4 17.6 252 705-991 64-340 (365)
180 3rp9_A Mitogen-activated prote 100.0 1.1E-38 3.6E-43 373.0 13.6 199 705-908 52-280 (458)
181 3mtl_A Cell division protein k 100.0 5E-39 1.7E-43 357.8 10.3 269 706-986 2-284 (324)
182 2i1m_A Macrophage colony-stimu 100.0 4.6E-39 1.6E-43 359.9 10.0 261 704-990 44-326 (333)
183 4eut_A Serine/threonine-protei 100.0 1.5E-38 5.3E-43 363.9 14.4 277 705-990 8-309 (396)
184 3kfa_A Tyrosine-protein kinase 100.0 6.5E-39 2.2E-43 350.9 10.7 258 704-990 11-271 (288)
185 3n9x_A Phosphotransferase; mal 100.0 1.6E-38 5.6E-43 367.7 14.6 205 705-914 25-254 (432)
186 2ac3_A MAP kinase-interacting 100.0 1.7E-38 5.7E-43 352.6 14.1 269 706-986 12-298 (316)
187 4hgt_A Casein kinase I isoform 100.0 1.2E-38 4.2E-43 350.1 12.9 264 704-991 7-281 (296)
188 3i6u_A CDS1, serine/threonine- 100.0 1.9E-38 6.4E-43 365.5 14.7 255 704-986 133-402 (419)
189 2w1i_A JAK2; chromosomal rearr 100.0 3.8E-38 1.3E-42 351.2 16.7 272 705-991 40-323 (326)
190 2yfx_A Tyrosine-protein kinase 100.0 8.9E-39 3E-43 356.5 11.4 259 705-990 29-304 (327)
191 2ozo_A Tyrosine-protein kinase 100.0 1.5E-38 5.2E-43 382.7 14.2 254 713-994 343-602 (613)
192 3g33_A Cell division protein k 100.0 1.1E-38 3.9E-43 352.5 11.8 274 704-986 7-299 (308)
193 3uzp_A CKI-delta, CKID, casein 100.0 2.4E-38 8.2E-43 347.8 14.1 265 705-993 8-283 (296)
194 2qr7_A Ribosomal protein S6 ki 100.0 4.2E-39 1.4E-43 360.1 7.8 256 705-988 21-282 (342)
195 2h8h_A Proto-oncogene tyrosine 100.0 7.5E-39 2.6E-43 380.0 10.4 257 705-991 266-524 (535)
196 2vgo_A Serine/threonine-protei 100.0 5.6E-38 1.9E-42 342.6 16.4 249 705-986 13-265 (284)
197 1byg_A CSK, protein (C-termina 100.0 1.4E-38 4.9E-43 346.2 11.4 254 705-992 20-275 (278)
198 2h34_A Serine/threonine-protei 100.0 2.3E-38 7.9E-43 350.0 13.2 262 705-993 33-299 (309)
199 2y7j_A Phosphorylase B kinase 100.0 4.4E-38 1.5E-42 355.8 15.6 259 699-985 87-361 (365)
200 3bhy_A Death-associated protei 100.0 2.3E-38 7.8E-43 345.6 12.7 259 706-992 5-276 (283)
201 2a19_B Interferon-induced, dou 100.0 5.1E-38 1.8E-42 342.9 15.2 256 705-995 10-279 (284)
202 2jii_A Serine/threonine-protei 100.0 2.3E-38 7.7E-43 357.0 12.6 265 706-992 42-338 (352)
203 2rku_A Serine/threonine-protei 100.0 5.7E-38 1.9E-42 344.5 15.4 252 705-987 14-269 (294)
204 3is5_A Calcium-dependent prote 100.0 8.2E-38 2.8E-42 341.4 16.5 252 705-985 21-280 (285)
205 1t4h_A Serine/threonine-protei 100.0 4.1E-38 1.4E-42 344.8 14.2 254 706-986 26-285 (290)
206 3c4z_A Rhodopsin kinase; Ser/T 100.0 5.4E-38 1.8E-42 368.5 16.1 255 705-985 184-450 (543)
207 2id5_A Lingo-1, leucine rich r 100.0 9.9E-37 3.4E-41 358.7 26.6 319 57-460 15-333 (477)
208 2jam_A Calcium/calmodulin-depe 100.0 2.4E-38 8.2E-43 349.2 12.0 253 705-986 8-264 (304)
209 1cm8_A Phosphorylated MAP kina 100.0 2.8E-38 9.5E-43 357.5 12.8 267 705-985 24-309 (367)
210 3pg1_A Mitogen-activated prote 100.0 4.1E-38 1.4E-42 356.6 14.1 283 696-986 12-319 (362)
211 4aaa_A Cyclin-dependent kinase 100.0 3.4E-38 1.2E-42 352.4 13.2 270 705-986 24-309 (331)
212 1u46_A ACK-1, activated CDC42 100.0 1.8E-38 6E-43 348.0 10.7 262 705-993 17-287 (291)
213 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.5E-38 5.1E-43 354.8 10.2 271 704-986 32-321 (329)
214 3nsz_A CK II alpha, casein kin 100.0 4.6E-38 1.6E-42 351.4 14.0 267 705-986 35-322 (330)
215 1xbb_A Tyrosine-protein kinase 100.0 2.6E-38 8.9E-43 346.6 11.5 257 705-990 15-279 (291)
216 3mwu_A Calmodulin-domain prote 100.0 6.1E-38 2.1E-42 369.1 15.4 253 705-986 21-279 (486)
217 3byv_A Rhoptry kinase; malaria 100.0 6E-39 2.1E-43 365.0 6.4 245 705-984 72-360 (377)
218 3eqc_A Dual specificity mitoge 100.0 6.4E-38 2.2E-42 354.6 14.3 262 705-986 32-327 (360)
219 3ll6_A Cyclin G-associated kin 100.0 3.6E-38 1.2E-42 353.3 12.2 262 705-993 27-311 (337)
220 3q60_A ROP5B; pseudokinase, tr 100.0 1.1E-38 3.7E-43 362.2 8.0 259 706-985 62-354 (371)
221 2j7t_A Serine/threonine-protei 100.0 2.1E-38 7.3E-43 349.3 10.0 254 705-985 18-277 (302)
222 2owb_A Serine/threonine-protei 100.0 7.8E-38 2.7E-42 349.9 14.5 251 705-986 40-294 (335)
223 1ua2_A CAK, cell division prot 100.0 3.1E-38 1.1E-42 354.8 11.2 272 704-986 8-294 (346)
224 1fvr_A Tyrosine-protein kinase 100.0 5.2E-38 1.8E-42 350.4 12.8 257 706-992 25-302 (327)
225 3lij_A Calcium/calmodulin depe 100.0 5.5E-38 1.9E-42 370.1 13.6 253 705-986 36-294 (494)
226 4fl3_A Tyrosine-protein kinase 100.0 5.2E-38 1.8E-42 378.8 13.5 250 712-990 375-631 (635)
227 3q5i_A Protein kinase; CDPK, m 100.0 1.1E-37 3.8E-42 368.4 16.0 254 704-986 34-304 (504)
228 3nyv_A Calmodulin-domain prote 100.0 3.6E-38 1.2E-42 371.2 11.2 253 705-986 25-284 (484)
229 3pfq_A PKC-B, PKC-beta, protei 100.0 8E-38 2.7E-42 379.8 14.4 251 704-985 339-599 (674)
230 3mi9_A Cell division protein k 100.0 9.1E-38 3.1E-42 352.1 13.9 276 705-986 16-314 (351)
231 3a7i_A MST3 kinase, serine/thr 100.0 1.2E-37 4E-42 343.6 14.3 255 705-990 21-277 (303)
232 2h6d_A 5'-AMP-activated protei 100.0 8.9E-38 3.1E-42 339.5 13.0 250 705-986 10-264 (276)
233 3eb0_A Putative uncharacterize 100.0 6.6E-38 2.2E-42 357.3 12.6 269 703-984 4-322 (383)
234 1vzo_A Ribosomal protein S6 ki 100.0 2E-38 6.9E-43 357.3 8.2 255 706-986 54-324 (355)
235 2clq_A Mitogen-activated prote 100.0 1.9E-37 6.4E-42 340.5 15.6 254 706-986 22-281 (295)
236 3kvw_A DYRK2, dual specificity 100.0 1.1E-37 3.8E-42 359.9 14.3 267 705-986 96-411 (429)
237 1wak_A Serine/threonine-protei 100.0 9.1E-38 3.1E-42 358.5 13.5 271 705-985 36-393 (397)
238 3sv0_A Casein kinase I-like; t 100.0 1.2E-37 4E-42 362.5 14.4 263 705-990 6-278 (483)
239 3com_A Serine/threonine-protei 100.0 1.5E-37 5E-42 344.7 14.3 254 704-986 27-281 (314)
240 3lm5_A Serine/threonine-protei 100.0 8.1E-38 2.8E-42 348.5 12.2 257 703-986 25-290 (327)
241 2xrw_A Mitogen-activated prote 100.0 1.7E-37 5.8E-42 352.2 15.0 271 705-986 24-321 (371)
242 2w5a_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 343.7 7.9 260 705-991 5-275 (279)
243 2fst_X Mitogen-activated prote 100.0 5.6E-38 1.9E-42 354.6 10.0 269 705-986 28-314 (367)
244 2wtk_C Serine/threonine-protei 100.0 4E-37 1.4E-41 339.6 16.7 256 705-987 4-267 (305)
245 3qyz_A Mitogen-activated prote 100.0 1.6E-37 5.6E-42 351.6 13.2 275 705-986 26-316 (364)
246 1phk_A Phosphorylase kinase; g 100.0 2.4E-37 8.3E-42 340.2 14.1 254 705-986 16-286 (298)
247 1x8b_A WEE1HU, WEE1-like prote 100.0 2.6E-37 9E-42 338.0 14.3 246 705-986 10-282 (289)
248 3fme_A Dual specificity mitoge 100.0 5.7E-38 1.9E-42 343.7 8.8 253 705-986 6-269 (290)
249 2vwi_A Serine/threonine-protei 100.0 3.4E-38 1.2E-42 347.8 6.6 264 704-985 13-289 (303)
250 2pml_X PFPK7, Ser/Thr protein 100.0 1.8E-37 6.1E-42 349.4 12.6 265 705-985 30-324 (348)
251 3an0_A Dual specificity mitoge 100.0 8.1E-38 2.8E-42 350.9 9.8 254 704-986 49-313 (340)
252 2ycf_A Serine/threonine-protei 100.0 1.9E-37 6.5E-42 345.0 12.5 252 705-984 9-275 (322)
253 3o6n_A APL1; leucine-rich repe 100.0 4.7E-36 1.6E-40 343.2 23.7 349 32-485 4-353 (390)
254 4exu_A Mitogen-activated prote 100.0 2.9E-37 9.8E-42 350.3 12.8 269 705-986 41-326 (371)
255 2x7f_A TRAF2 and NCK-interacti 100.0 9.5E-38 3.2E-42 348.2 8.7 261 701-986 19-289 (326)
256 1j1b_A Glycogen synthase kinas 100.0 2.9E-37 9.9E-42 355.6 12.8 268 706-986 54-339 (420)
257 2r3i_A Cell division protein k 100.0 4.3E-37 1.5E-41 338.3 13.3 269 706-986 3-286 (299)
258 3cek_A Dual specificity protei 100.0 1E-37 3.5E-42 345.7 8.3 256 703-986 25-295 (313)
259 4e7w_A Glycogen synthase kinas 100.0 2.9E-37 9.8E-42 352.8 12.2 274 706-990 40-330 (394)
260 2j0j_A Focal adhesion kinase 1 100.0 3.4E-37 1.2E-41 373.1 13.2 257 705-990 389-651 (656)
261 3oja_B Anopheles plasmodium-re 100.0 3.7E-36 1.3E-40 363.0 22.0 347 32-462 10-360 (597)
262 2i6l_A Mitogen-activated prote 100.0 3.9E-37 1.3E-41 342.1 12.0 275 705-986 10-308 (320)
263 3rgf_A Cyclin-dependent kinase 100.0 4.1E-37 1.4E-41 353.5 12.4 273 707-987 21-337 (405)
264 3fhr_A MAP kinase-activated pr 100.0 3.1E-37 1.1E-41 345.0 10.9 265 705-993 27-297 (336)
265 4fcg_A Uncharacterized protein 100.0 2.2E-36 7.5E-41 336.2 17.8 275 5-336 22-317 (328)
266 2y4i_B KSR2, HKSR2, kinase sup 100.0 9.5E-38 3.3E-42 347.0 6.4 260 705-993 32-305 (319)
267 1z57_A Dual specificity protei 100.0 9E-37 3.1E-41 342.1 14.2 265 705-984 13-329 (339)
268 1zy4_A Serine/threonine-protei 100.0 3.7E-37 1.2E-41 339.5 10.5 258 705-985 5-285 (303)
269 2vx3_A Dual specificity tyrosi 100.0 1.2E-36 4.3E-41 346.6 15.1 200 704-915 52-261 (382)
270 1q8y_A SR protein kinase; tran 100.0 6.3E-37 2.2E-41 348.4 12.4 272 705-986 18-336 (373)
271 3coi_A Mitogen-activated prote 100.0 7.6E-37 2.6E-41 344.7 12.7 267 705-986 23-308 (353)
272 3e3p_A Protein kinase, putativ 100.0 1E-36 3.6E-41 344.8 12.9 280 700-986 17-317 (360)
273 2b9h_A MAP kinase FUS3, mitoge 100.0 2.3E-36 7.8E-41 341.0 15.4 275 705-986 10-308 (353)
274 1blx_A Cyclin-dependent kinase 100.0 1.3E-36 4.6E-41 338.9 13.1 274 704-985 9-298 (326)
275 2wei_A Calmodulin-domain prote 100.0 1.2E-36 4E-41 332.7 12.3 254 704-986 20-279 (287)
276 2rio_A Serine/threonine-protei 100.0 1.4E-36 4.8E-41 351.5 12.6 251 707-984 16-296 (434)
277 3aln_A Dual specificity mitoge 100.0 8.8E-37 3E-41 340.4 10.4 256 705-986 21-288 (327)
278 3o6n_A APL1; leucine-rich repe 100.0 1.5E-35 5.1E-40 339.0 20.4 333 273-631 46-378 (390)
279 3p23_A Serine/threonine-protei 100.0 1.1E-36 3.7E-41 351.2 10.6 250 706-984 24-284 (432)
280 2iwi_A Serine/threonine-protei 100.0 1.1E-36 3.7E-41 337.3 9.7 246 702-986 27-286 (312)
281 3a99_A Proto-oncogene serine/t 100.0 7.7E-37 2.6E-41 339.5 8.2 244 704-986 41-296 (320)
282 2eu9_A Dual specificity protei 100.0 6.6E-36 2.3E-40 337.5 15.5 266 705-986 18-336 (355)
283 1ogq_A PGIP-2, polygalacturona 100.0 6.9E-36 2.4E-40 330.2 14.3 256 375-632 50-309 (313)
284 3oja_B Anopheles plasmodium-re 100.0 3.4E-35 1.2E-39 354.6 20.6 335 271-631 50-384 (597)
285 2dyl_A Dual specificity mitoge 100.0 2.5E-36 8.4E-41 335.5 9.0 253 705-985 24-285 (318)
286 4fmz_A Internalin; leucine ric 100.0 2.9E-34 9.9E-39 323.0 24.5 305 74-483 41-345 (347)
287 4fmz_A Internalin; leucine ric 100.0 1.9E-34 6.6E-39 324.4 22.8 285 292-604 62-346 (347)
288 3qa8_A MGC80376 protein; kinas 100.0 1.8E-36 6.1E-41 359.0 5.4 268 705-982 13-296 (676)
289 3uqc_A Probable conserved tran 100.0 6.4E-35 2.2E-39 317.8 14.0 235 705-993 30-268 (286)
290 3m2w_A MAP kinase-activated pr 100.0 1.6E-34 5.4E-39 317.7 15.7 239 705-989 16-262 (299)
291 3dzo_A Rhoptry kinase domain; 100.0 3.8E-35 1.3E-39 337.1 8.1 244 706-984 78-364 (413)
292 2pzi_A Probable serine/threoni 100.0 1.4E-34 4.7E-39 354.2 13.3 243 705-988 79-326 (681)
293 2ft3_A Biglycan; proteoglycan, 100.0 5.9E-33 2E-37 310.0 24.4 197 78-335 34-232 (332)
294 2ft3_A Biglycan; proteoglycan, 100.0 1.2E-32 4.2E-37 307.4 22.9 268 296-602 54-331 (332)
295 2vuw_A Serine/threonine-protei 100.0 1.4E-34 4.8E-39 323.8 6.5 249 705-984 19-332 (336)
296 1xku_A Decorin; proteoglycan, 100.0 1.9E-32 6.5E-37 305.7 23.6 288 248-577 32-329 (330)
297 1xku_A Decorin; proteoglycan, 100.0 2.8E-32 9.7E-37 304.2 24.3 103 78-187 32-134 (330)
298 1z7x_W Ribonuclease inhibitor; 100.0 1.7E-35 5.9E-40 346.8 -8.2 365 53-460 3-411 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 3.2E-35 1.1E-39 344.5 -10.5 387 173-605 2-441 (461)
300 2z80_A TOLL-like receptor 2, v 100.0 7.9E-32 2.7E-36 303.6 15.1 287 33-365 22-317 (353)
301 1wwl_A Monocyte differentiatio 100.0 2.2E-32 7.6E-37 302.2 0.7 268 33-333 23-309 (312)
302 3ogk_B Coronatine-insensitive 100.0 3.4E-33 1.2E-37 338.2 -8.5 466 39-575 40-546 (592)
303 2z66_A Variable lymphocyte rec 100.0 3.2E-30 1.1E-34 284.4 14.0 254 38-363 4-262 (306)
304 2z66_A Variable lymphocyte rec 100.0 7.4E-30 2.5E-34 281.5 16.5 282 276-590 11-297 (306)
305 3g06_A SSPH2 (leucine-rich rep 100.0 1.1E-29 3.6E-34 303.4 17.3 290 32-447 13-308 (622)
306 2z80_A TOLL-like receptor 2, v 100.0 5.3E-30 1.8E-34 288.7 13.0 278 273-609 32-319 (353)
307 3zyi_A Leucine-rich repeat-con 100.0 6.2E-29 2.1E-33 289.7 22.2 233 374-608 74-307 (452)
308 3ogk_B Coronatine-insensitive 100.0 2.2E-32 7.5E-37 331.1 -8.6 403 148-601 110-548 (592)
309 3zyj_A Leucine-rich repeat-con 100.0 1.1E-28 3.7E-33 286.7 21.8 232 375-608 64-296 (440)
310 3zyi_A Leucine-rich repeat-con 100.0 1.6E-28 5.5E-33 286.2 20.3 244 57-362 58-303 (452)
311 1ozn_A Reticulon 4 receptor; N 100.0 4.3E-29 1.5E-33 272.3 14.4 211 399-609 32-243 (285)
312 1ozn_A Reticulon 4 receptor; N 100.0 8.4E-29 2.9E-33 270.0 15.1 253 352-610 14-267 (285)
313 4fcg_A Uncharacterized protein 100.0 1.3E-28 4.4E-33 273.6 16.4 224 376-604 82-314 (328)
314 1wwl_A Monocyte differentiatio 100.0 6E-30 2.1E-34 282.6 5.4 203 397-605 93-310 (312)
315 3oja_A Leucine-rich immune mol 100.0 1.4E-29 4.9E-34 296.7 8.6 215 376-604 35-250 (487)
316 3o53_A Protein LRIM1, AGAP0063 100.0 2.2E-29 7.6E-34 278.8 8.2 266 274-584 12-280 (317)
317 3zyj_A Leucine-rich repeat-con 100.0 7.5E-28 2.6E-32 279.5 20.4 246 56-362 46-292 (440)
318 3g06_A SSPH2 (leucine-rich rep 100.0 2.1E-27 7.1E-32 283.6 23.4 269 101-495 40-308 (622)
319 3o53_A Protein LRIM1, AGAP0063 100.0 3E-29 1E-33 277.7 6.1 89 398-488 190-280 (317)
320 2o6q_A Variable lymphocyte rec 99.9 3.4E-27 1.2E-31 254.9 18.9 218 38-310 2-219 (270)
321 2p1m_B Transport inhibitor res 99.9 4.6E-31 1.6E-35 319.6 -15.5 470 39-605 33-545 (594)
322 3oja_A Leucine-rich immune mol 99.9 1.4E-27 4.8E-32 279.7 9.8 237 294-575 32-270 (487)
323 2z62_A TOLL-like receptor 4, v 99.9 3E-26 1E-30 248.5 18.5 226 381-610 13-243 (276)
324 4azs_A Methyltransferase WBDD; 99.9 1.4E-28 4.8E-33 292.1 -0.3 185 714-912 242-438 (569)
325 2p1m_B Transport inhibitor res 99.9 3.3E-29 1.1E-33 303.4 -11.5 376 147-605 102-520 (594)
326 2z62_A TOLL-like receptor 4, v 99.9 2E-25 6.8E-30 242.0 18.0 210 374-584 27-241 (276)
327 2o6q_A Variable lymphocyte rec 99.9 6E-25 2E-29 237.2 20.0 205 401-608 18-222 (270)
328 3rfs_A Internalin B, repeat mo 99.9 1.8E-25 6.1E-30 241.6 15.7 188 395-591 59-246 (272)
329 3rfs_A Internalin B, repeat mo 99.9 1.8E-25 6.3E-30 241.5 12.4 168 394-568 80-247 (272)
330 1p9a_G Platelet glycoprotein I 99.9 1.6E-24 5.6E-29 235.9 18.0 205 395-606 6-210 (290)
331 3m19_A Variable lymphocyte rec 99.9 1.7E-24 5.9E-29 230.9 16.8 191 39-261 3-193 (251)
332 3en9_A Glycoprotease, O-sialog 99.9 1.7E-25 5.9E-30 264.0 6.1 186 709-913 339-539 (540)
333 1p9a_G Platelet glycoprotein I 99.9 1.8E-23 6.3E-28 227.6 18.5 203 345-580 6-208 (290)
334 2xwt_C Thyrotropin receptor; s 99.9 7.9E-24 2.7E-28 224.0 13.7 204 68-307 25-237 (239)
335 3goz_A Leucine-rich repeat-con 99.9 2.8E-25 9.7E-30 250.7 1.0 266 57-364 2-299 (362)
336 2ast_B S-phase kinase-associat 99.9 2.7E-25 9.1E-30 248.5 0.1 191 37-258 33-233 (336)
337 4ay9_X Follicle-stimulating ho 99.9 4.4E-23 1.5E-27 231.4 18.2 245 41-359 9-256 (350)
338 3cvr_A Invasion plasmid antige 99.9 7.9E-24 2.7E-28 249.5 11.7 215 33-321 35-255 (571)
339 2xwt_C Thyrotropin receptor; s 99.9 2.1E-23 7.1E-28 220.8 13.8 196 400-601 32-236 (239)
340 3m19_A Variable lymphocyte rec 99.9 5.1E-23 1.8E-27 219.4 16.6 159 448-606 36-194 (251)
341 4glp_A Monocyte differentiatio 99.9 8.7E-24 3E-28 233.1 10.1 202 376-604 92-307 (310)
342 3goz_A Leucine-rich repeat-con 99.9 1.2E-24 4.1E-29 245.6 1.6 231 377-607 24-300 (362)
343 2ca6_A RAN GTPase-activating p 99.9 2.4E-25 8.2E-30 253.8 -4.2 193 147-365 91-319 (386)
344 4glp_A Monocyte differentiatio 99.9 4.5E-23 1.5E-27 227.3 13.2 204 347-556 89-307 (310)
345 2o6s_A Variable lymphocyte rec 99.9 1.9E-22 6.4E-27 208.5 17.0 198 37-311 3-200 (208)
346 2ca6_A RAN GTPase-activating p 99.9 3E-25 1E-29 253.0 -4.4 264 299-607 12-319 (386)
347 2ast_B S-phase kinase-associat 99.9 5.9E-24 2E-28 237.5 4.7 258 78-396 48-314 (336)
348 1h6u_A Internalin H; cell adhe 99.9 1E-22 3.6E-27 223.8 14.2 173 395-581 59-231 (308)
349 1h6u_A Internalin H; cell adhe 99.9 1.5E-22 5.1E-27 222.6 12.8 195 395-605 37-231 (308)
350 4ay9_X Follicle-stimulating ho 99.9 3.9E-22 1.3E-26 223.7 15.2 223 375-602 30-257 (350)
351 4b8c_D Glucose-repressible alc 99.9 6.3E-23 2.1E-27 251.2 5.8 224 4-262 126-356 (727)
352 1zar_A RIO2 kinase; serine kin 99.9 4.4E-22 1.5E-26 215.2 9.5 163 700-897 84-274 (282)
353 3e6j_A Variable lymphocyte rec 99.8 8E-21 2.7E-25 199.2 15.9 164 33-238 11-174 (229)
354 2o6s_A Variable lymphocyte rec 99.8 8E-21 2.7E-25 196.2 15.5 161 424-591 29-189 (208)
355 3cvr_A Invasion plasmid antige 99.8 4.5E-21 1.6E-25 226.0 14.0 187 350-590 60-253 (571)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 5.3E-21 1.8E-25 199.1 8.0 156 451-609 15-171 (220)
357 2xot_A Amphoterin-induced prot 99.8 2.1E-20 7.2E-25 210.5 11.0 176 402-580 21-202 (361)
358 2v9t_B SLIT homolog 2 protein 99.8 1.1E-19 3.9E-24 189.0 15.6 161 36-197 6-175 (220)
359 2v9t_B SLIT homolog 2 protein 99.8 1.3E-20 4.4E-25 196.1 7.9 134 472-605 33-166 (220)
360 1h6t_A Internalin B; cell adhe 99.8 6E-20 2.1E-24 199.9 12.8 150 395-556 64-213 (291)
361 1m9s_A Internalin B; cell inva 99.8 9.9E-20 3.4E-24 217.2 14.4 130 395-558 83-212 (605)
362 1m9s_A Internalin B; cell inva 99.8 1.2E-19 4.3E-24 216.3 14.7 170 271-485 42-211 (605)
363 1dce_A Protein (RAB geranylger 99.8 4.5E-21 1.5E-25 227.5 0.7 203 171-453 346-566 (567)
364 2v70_A SLIT-2, SLIT homolog 2 99.8 2.1E-19 7.2E-24 187.0 13.2 134 449-582 34-168 (220)
365 1h6t_A Internalin B; cell adhe 99.8 1.4E-19 4.7E-24 197.1 12.3 173 395-581 42-214 (291)
366 2xot_A Amphoterin-induced prot 99.8 1.3E-19 4.5E-24 204.0 11.9 177 377-556 20-202 (361)
367 3e6j_A Variable lymphocyte rec 99.8 4.3E-19 1.5E-23 185.9 13.8 155 450-608 22-176 (229)
368 1dce_A Protein (RAB geranylger 99.8 3.9E-21 1.3E-25 228.0 -3.4 203 269-501 346-566 (567)
369 4ezg_A Putative uncharacterize 99.8 9.8E-19 3.4E-23 178.7 10.6 152 74-259 41-193 (197)
370 4b8c_D Glucose-repressible alc 99.8 1.8E-19 6.2E-24 220.5 5.5 181 416-606 217-406 (727)
371 1w8a_A SLIT protein; signaling 99.8 6.7E-18 2.3E-22 171.6 14.9 171 56-235 11-182 (192)
372 1xeu_A Internalin C; cellular 99.7 1.1E-18 3.6E-23 187.0 8.6 166 377-557 21-186 (263)
373 1xeu_A Internalin C; cellular 99.7 2E-18 6.7E-23 184.9 10.6 169 270-460 17-185 (263)
374 4ezg_A Putative uncharacterize 99.7 7.8E-18 2.7E-22 172.0 12.7 150 54-237 45-195 (197)
375 1w8a_A SLIT protein; signaling 99.7 1.6E-18 5.5E-23 176.1 6.2 131 450-583 11-142 (192)
376 1zth_A RIO1 serine protein kin 99.7 1.8E-18 6E-23 184.7 6.6 138 707-860 48-219 (258)
377 3sb4_A Hypothetical leucine ri 99.7 1.8E-18 6.3E-23 192.0 5.5 102 470-573 225-327 (329)
378 3sb4_A Hypothetical leucine ri 99.7 7.2E-18 2.5E-22 187.2 7.9 197 398-598 100-328 (329)
379 2wfh_A SLIT homolog 2 protein 99.7 2.8E-16 9.6E-21 159.5 15.3 138 57-199 14-151 (193)
380 2o6r_A Variable lymphocyte rec 99.7 2.8E-16 9.7E-21 157.4 13.6 136 39-190 5-140 (177)
381 2ell_A Acidic leucine-rich nuc 99.7 1.3E-16 4.3E-21 158.5 10.9 133 76-237 23-161 (168)
382 2ell_A Acidic leucine-rich nuc 99.6 2E-16 6.7E-21 157.1 9.1 130 449-580 26-160 (168)
383 2wfh_A SLIT homolog 2 protein 99.6 8.8E-17 3E-21 163.3 6.4 111 496-607 32-142 (193)
384 4fdw_A Leucine rich hypothetic 99.6 2.4E-15 8.3E-20 170.4 17.5 266 295-604 112-383 (401)
385 4fdw_A Leucine rich hypothetic 99.6 2.3E-15 7.8E-20 170.6 17.0 249 289-580 129-383 (401)
386 2je0_A Acidic leucine-rich nuc 99.6 4E-16 1.4E-20 151.4 8.5 108 77-187 17-126 (149)
387 2o6r_A Variable lymphocyte rec 99.6 7.1E-16 2.4E-20 154.5 10.4 114 495-608 28-141 (177)
388 2je0_A Acidic leucine-rich nuc 99.6 4E-16 1.4E-20 151.4 6.9 126 448-575 18-148 (149)
389 4gyi_A RIO2 kinase; protein ki 99.6 1.5E-15 5.3E-20 167.5 9.8 143 702-860 91-265 (397)
390 1a9n_A U2A', U2A'; complex (nu 99.6 2.4E-15 8.3E-20 150.3 9.0 133 72-236 14-153 (176)
391 1ds9_A Outer arm dynein; leuci 99.6 3E-17 1E-21 167.8 -5.8 139 73-241 14-158 (198)
392 4fs7_A Uncharacterized protein 99.6 5.8E-14 2E-18 159.8 20.5 316 138-551 59-374 (394)
393 4fs7_A Uncharacterized protein 99.6 7.7E-14 2.6E-18 158.8 21.1 102 418-524 292-393 (394)
394 1ds9_A Outer arm dynein; leuci 99.6 9.1E-17 3.1E-21 164.2 -3.2 86 145-260 43-128 (198)
395 1a9n_A U2A', U2A'; complex (nu 99.5 5.3E-15 1.8E-19 147.9 7.3 135 95-260 13-153 (176)
396 2r9u_A Variable lymphocyte rec 99.5 6.9E-14 2.4E-18 139.1 12.4 104 56-163 15-118 (174)
397 3g39_A Variable lymphocyte rec 99.5 4.2E-14 1.4E-18 140.2 9.5 109 497-608 11-119 (170)
398 3g39_A Variable lymphocyte rec 99.5 9.9E-14 3.4E-18 137.5 12.2 103 57-163 13-115 (170)
399 2r9u_A Variable lymphocyte rec 99.5 1.1E-13 3.7E-18 137.8 9.5 108 498-608 15-122 (174)
400 2ifg_A High affinity nerve gro 99.4 1.3E-12 4.3E-17 146.1 13.0 137 41-217 8-146 (347)
401 3un9_A NLR family member X1; l 99.3 2.1E-14 7.3E-19 161.0 -7.0 111 77-187 72-196 (372)
402 4gt6_A Cell surface protein; l 99.3 5.2E-11 1.8E-15 135.4 19.9 329 219-603 59-390 (394)
403 4gt6_A Cell surface protein; l 99.3 4.8E-11 1.6E-15 135.7 19.6 111 415-529 257-367 (394)
404 3un9_A NLR family member X1; l 99.3 3.9E-14 1.3E-18 158.9 -8.3 87 495-581 155-253 (372)
405 2ifg_A High affinity nerve gro 99.3 7.4E-12 2.5E-16 139.9 9.2 103 500-605 13-117 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.1 3.9E-11 1.3E-15 128.2 6.1 146 702-858 10-212 (263)
407 4h09_A Hypothetical leucine ri 99.1 2.1E-09 7.2E-14 121.4 19.3 300 218-550 41-340 (379)
408 3rw6_A Nuclear RNA export fact 99.0 2.8E-12 9.5E-17 134.9 -7.9 144 40-188 77-234 (267)
409 4h09_A Hypothetical leucine ri 99.0 1.9E-08 6.3E-13 113.6 22.8 84 394-479 258-341 (379)
410 1nd4_A Aminoglycoside 3'-phosp 99.0 2.8E-10 9.7E-15 121.3 4.8 137 706-858 20-213 (264)
411 2ra8_A Uncharacterized protein 98.8 9.2E-10 3.2E-14 122.2 3.9 103 52-158 106-227 (362)
412 2ra8_A Uncharacterized protein 98.8 7.8E-10 2.7E-14 122.8 1.3 84 517-602 250-341 (362)
413 3dxp_A Putative acyl-COA dehyd 98.7 6.5E-09 2.2E-13 116.4 6.8 145 710-859 42-248 (359)
414 3sg8_A APH(2'')-ID; antibiotic 98.7 2.9E-09 9.9E-14 116.2 2.2 192 711-914 25-289 (304)
415 1io0_A Tropomodulin; LRR prote 98.5 4.7E-09 1.6E-13 105.1 -3.5 122 67-188 26-165 (185)
416 3rw6_A Nuclear RNA export fact 98.4 5.3E-08 1.8E-12 102.3 1.0 66 492-559 167-236 (267)
417 1io0_A Tropomodulin; LRR prote 98.3 4.4E-08 1.5E-12 98.0 -1.2 42 146-187 61-106 (185)
418 3r70_A Aminoglycoside phosphot 98.3 1.3E-06 4.4E-11 95.8 10.0 136 707-859 38-237 (320)
419 3d1u_A Putative fructosamine-3 98.1 4.4E-06 1.5E-10 89.7 9.5 77 709-793 18-97 (288)
420 3tdw_A Gentamicin resistance p 98.0 5.9E-06 2E-10 89.8 7.8 136 711-858 24-223 (306)
421 4gkh_A Aminoglycoside 3'-phosp 98.0 1.3E-05 4.4E-10 85.5 9.5 134 713-858 31-222 (272)
422 3ovc_A Hygromycin-B 4-O-kinase 97.9 1.6E-05 5.6E-10 88.3 7.5 142 709-859 44-243 (362)
423 3ats_A Putative uncharacterize 97.8 1.1E-05 3.6E-10 90.0 5.3 83 712-795 26-122 (357)
424 2olc_A MTR kinase, methylthior 97.6 9.7E-05 3.3E-09 83.4 9.1 75 711-791 35-120 (397)
425 2q83_A YTAA protein; 2635576, 97.5 0.00011 3.6E-09 81.2 7.3 138 712-858 38-251 (346)
426 3e4g_A ATP synthase subunit S, 97.4 3.1E-05 1.1E-09 75.2 1.1 83 520-602 62-150 (176)
427 3e4g_A ATP synthase subunit S, 97.4 3E-05 1E-09 75.3 0.7 36 150-185 114-150 (176)
428 3f7w_A Putative fructosamine-3 97.3 0.00058 2E-08 73.2 9.0 78 708-793 17-97 (288)
429 3jr1_A Putative fructosamine-3 97.2 0.0006 2E-08 73.6 7.8 137 710-855 40-232 (312)
430 3rfe_A Platelet glycoprotein I 97.1 0.0015 5.1E-08 60.4 8.6 57 130-188 12-69 (130)
431 2pyw_A Uncharacterized protein 97.0 0.0013 4.3E-08 74.8 9.3 80 828-909 231-313 (420)
432 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00017 5.7E-09 71.5 1.6 43 145-187 65-111 (197)
433 3dxq_A Choline/ethanolamine ki 96.9 0.00087 3E-08 72.3 6.2 131 708-859 20-202 (301)
434 3csv_A Aminoglycoside phosphot 96.6 0.0028 9.6E-08 69.4 7.7 139 712-859 24-217 (333)
435 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00034 1.2E-08 69.2 -0.1 62 399-460 41-111 (197)
436 3feg_A Choline/ethanolamine ki 96.6 0.0037 1.3E-07 69.3 8.2 138 712-858 56-253 (379)
437 2ppq_A HSK, HK, homoserine kin 96.6 0.0023 7.8E-08 69.7 6.3 159 696-858 7-216 (322)
438 3rfe_A Platelet glycoprotein I 96.5 0.0031 1.1E-07 58.2 6.2 56 105-163 12-68 (130)
439 1nw1_A Choline kinase (49.2 KD 96.5 0.0043 1.5E-07 70.3 8.2 72 712-793 79-159 (429)
440 2qg7_A Ethanolamine kinase PV0 96.5 0.0065 2.2E-07 69.2 9.5 73 712-793 114-188 (458)
441 2yle_A Protein spire homolog 1 96.4 0.011 3.8E-07 58.6 9.8 105 791-913 33-137 (229)
442 1zyl_A Hypothetical protein YI 96.2 0.0069 2.4E-07 66.0 7.8 141 712-858 32-222 (328)
443 3c5i_A Choline kinase; choline 95.9 0.0084 2.9E-07 66.6 6.5 73 712-793 39-121 (369)
444 3i1a_A Spectinomycin phosphotr 95.1 0.018 6.2E-07 63.0 5.4 32 828-859 205-236 (339)
445 3f2s_A CK, chetk-alpha, cholin 94.6 0.064 2.2E-06 59.5 8.2 139 712-858 58-279 (401)
446 3mes_A Choline kinase; malaria 94.0 0.057 1.9E-06 60.6 6.2 73 712-793 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 91.7 0.28 9.7E-06 54.7 7.7 29 830-858 245-279 (401)
448 3cxl_A N-chimerin; SH2, RHO-GA 75.0 0.42 1.4E-05 54.3 -1.3 61 710-773 146-215 (463)
449 2ks1_B Epidermal growth factor 61.2 3.7 0.00013 29.1 1.7 22 651-672 13-34 (44)
450 4ann_A ESSB; membrane protein, 47.1 14 0.00047 36.5 3.9 121 760-918 43-163 (215)
451 2l2t_A Receptor tyrosine-prote 45.8 6.3 0.00021 27.9 0.8 17 652-668 13-29 (44)
452 4ano_A ESSB; membrane protein, 40.0 23 0.00078 35.1 4.2 83 804-915 82-165 (219)
453 2lz0_A Uncharacterized protein 35.9 59 0.002 27.6 5.7 14 489-502 14-27 (100)
454 2jwa_A Receptor tyrosine-prote 35.3 8.5 0.00029 27.1 0.2 7 652-658 14-20 (44)
455 2lz0_A Uncharacterized protein 28.3 66 0.0023 27.2 4.7 43 532-575 9-51 (100)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=5.3e-86 Score=821.93 Aligned_cols=626 Identities=31% Similarity=0.467 Sum_probs=438.8
Q ss_pred CCCCCCChhHHHHHHHHHHhccCCCCCccccCCCCCCCCCcccccEeeCCCCcEEEEEeCCCCCccc---cCcccCCCCC
Q 037042 2 AANTSNITTDLDALHALKTHITNDPTNFFAKNWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGT---IPSRLGNLSS 78 (1002)
Q Consensus 2 ~~~~~~~~~~~~~l~~~k~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~---~p~~l~~l~~ 78 (1002)
|+.+...++|++||++||+++. ||. .+ ++|+.++|||+|+||+|+ +++|+.|||+++.+.|. +|+++++|+.
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~-~~~-~l-~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~ 78 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLP-DKN-LL-PDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTG 78 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCS-CTT-SS-TTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTT
T ss_pred CccccCCHHHHHHHHHHHhhCC-Ccc-cc-cCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCc
Confidence 4455557899999999999996 787 55 589988999999999999 68999999999999998 7766666655
Q ss_pred CCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCc--ccCCCCCCCCEEeCCCCcccccCCccc-cCCCCCceE
Q 037042 79 LQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPT--NICSNLPFFESLNLSKNMFHGGIPSAL-SNCTYLRIL 155 (1002)
Q Consensus 79 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~--~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L 155 (1002)
|+.++++.|.+. .+|..|+++++|++|||++|.++|.+|. .+ +++++|++|+|++|.+++.+|..+ .++++|++|
T Consensus 79 L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l-~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 156 (768)
T 3rgz_A 79 LESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSL-GSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVL 156 (768)
T ss_dssp CCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGG-GGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEE
T ss_pred ccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHH-hCCCCCCEEECcCCccCCcCCHHHhccCCCCCEE
Confidence 555555555543 3445555555555555555555555554 32 445555555555555555555443 555555555
Q ss_pred EcccccCCCCCccc---cccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccC
Q 037042 156 RLSYNDFAGGIPKE---IGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGL 232 (1002)
Q Consensus 156 ~Ls~N~l~~~~p~~---~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~ 232 (1002)
+|++|++++..|.. +.++++|++|+|++|.+++..+. ..+.....+++++|...+.+|. ++++++|++|+|++
T Consensus 157 ~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~ 232 (768)
T 3rgz_A 157 DLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV---SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISG 232 (768)
T ss_dssp ECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC---TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCS
T ss_pred ECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc---ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcC
Confidence 55555555555544 45555555555555555543332 2233444455555555544444 55555555555555
Q ss_pred cccccccccccccccccceeecccCCCcc----------------------ccCCccccCCCccchhhcccccccccccc
Q 037042 233 NKLVGVIPAEIFNMSTIQGVGLQNNSLSG----------------------SLQSIPYVRLPNLEELYLWGNHFSGSIPN 290 (1002)
Q Consensus 233 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~----------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 290 (1002)
|++++.+|..+.++++|++|+|++|++.+ .++...+..+++|++|+|++|++++.+|.
T Consensus 233 n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~ 312 (768)
T 3rgz_A 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP 312 (768)
T ss_dssp SCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCG
T ss_pred CcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccch
Confidence 55555555555555555555555555544 33332222234555555555555555555
Q ss_pred cccccCCCCeeecCCCccCCCCccc-cccccccchhccccccCc-cchhhhhhhc-------------------ccCC--
Q 037042 291 FIFNASKLSRLELQKNSFSGFIPST-FGNLRNLKRLGLNNNHLT-SLTLELSFLS-------------------SLSN-- 347 (1002)
Q Consensus 291 ~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~-~l~~~~~~~~-------------------~l~~-- 347 (1002)
.|.++++|++|+|++|++++.+|.. |+++++|++|+|++|+++ .+|..+.... .+..
T Consensus 313 ~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~ 392 (768)
T 3rgz_A 313 FFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNP 392 (768)
T ss_dssp GGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCST
T ss_pred HHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcc
Confidence 5555555555555555555444433 555555555555555544 2332211110 0111
Q ss_pred CCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCE
Q 037042 348 CKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQV 427 (1002)
Q Consensus 348 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 427 (1002)
+++|++|++++|.+.+..+. .+.. .++|+.|++++|++++.+|..|+.+++|+.|++++|++++.+|..+..+++|++
T Consensus 393 ~~~L~~L~L~~n~l~~~~p~-~l~~-l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 470 (768)
T 3rgz_A 393 KNTLQELYLQNNGFTGKIPP-TLSN-CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470 (768)
T ss_dssp TCCCCEEECCSSEEEEECCG-GGGG-CTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred cCCccEEECCCCccccccCH-HHhc-CCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceE
Confidence 33444444444444433221 1111 246788888888888888888888888888888888888888888888888888
Q ss_pred EEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCC
Q 037042 428 LYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSL 507 (1002)
Q Consensus 428 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 507 (1002)
|+|++|++++.+|..+.++++|++|+|++|++++.+|..|+.+++|++|+|++|++.+.+|..+.++++|++|++++|++
T Consensus 471 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 550 (768)
T 3rgz_A 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 550 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEE
T ss_pred EEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCcc
Confidence 88888888888888888889999999999999988999999999999999999999988999999999999999999988
Q ss_pred CCCCcccc----------------------------------------------------------------------cc
Q 037042 508 TGPLPLEI----------------------------------------------------------------------GN 517 (1002)
Q Consensus 508 ~~~~~~~~----------------------------------------------------------------------~~ 517 (1002)
+|.+|..+ ..
T Consensus 551 ~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~ 630 (768)
T 3rgz_A 551 NGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDN 630 (768)
T ss_dssp ESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSS
T ss_pred CCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhc
Confidence 87666543 33
Q ss_pred cccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceee
Q 037042 518 LKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLN 597 (1002)
Q Consensus 518 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 597 (1002)
+++|+.|||++|+++|.+|..|+++++|+.|+|++|+++|.+|..|+.+++|+.|||++|+++|.+|..+.++++|++||
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCcccCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCcccc
Q 037042 598 LSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSPNLHVPPCKTSIQ 643 (1002)
Q Consensus 598 Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~~~pc~~~~~ 643 (1002)
|++|+++|.||.++++.++...+|.||+++||.|. ++|.....
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l---~~C~~~~~ 753 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL---PRCDPSNA 753 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS---CCCCSCC-
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCCC---cCCCCCcc
Confidence 99999999999999999999999999999999883 37865433
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.7e-67 Score=655.43 Aligned_cols=541 Identities=32% Similarity=0.458 Sum_probs=461.1
Q ss_pred CcEEEEEeCCCCCccccCc--ccCCCCCCCEEEcccCCCCCCCCccc-ccccCCcEEEecccccccccCccc--C-----
Q 037042 53 HRVTALNISHLSLSGTIPS--RLGNLSSLQSLFLHSNQFSGSIPFSI-FNIHTLKLLSFGDNQLSGEIPTNI--C----- 122 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~ip~~~--~----- 122 (1002)
.+++.|||++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|++++.+|... +
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~ 179 (768)
T 3rgz_A 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGE 179 (768)
T ss_dssp TTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTT
T ss_pred CCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCC
Confidence 4688999999999998988 89999999999999999988888776 677777777777777776555431 1
Q ss_pred -----------------CCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeecccc
Q 037042 123 -----------------SNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNG 185 (1002)
Q Consensus 123 -----------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 185 (1002)
..+++|++|+|++|.+++.+|. ++++++|++|+|++|++++.+|..|+++++|++|+|++|+
T Consensus 180 L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~ 258 (768)
T 3rgz_A 180 LKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQ 258 (768)
T ss_dssp CCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSC
T ss_pred CCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCc
Confidence 4567777777777777776776 8888888888888888888888888888888888888888
Q ss_pred ccccccchhhHHhhhchhhcccCCcccCCCCccccCc-cccceeeccCcccccccccccccccccceeecccCCCccccC
Q 037042 186 LQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNL-RNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQ 264 (1002)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 264 (1002)
+++..+.. .+.....+.+++|.+.+.+|..++.+ ++|++|+|++|++++.+|..+.++++|++|+|++|++++.++
T Consensus 259 l~~~~~~~---~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip 335 (768)
T 3rgz_A 259 FVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 335 (768)
T ss_dssp CEESCCCC---CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred ccCccCcc---ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCC
Confidence 87655433 34566778888888888999988775 999999999999999999999999999999999999988887
Q ss_pred CccccCCCccchhhcccccccccccccccccC-CCCeeecCCCccCCCCcccccc--ccccchhccccccCccchhhhhh
Q 037042 265 SIPYVRLPNLEELYLWGNHFSGSIPNFIFNAS-KLSRLELQKNSFSGFIPSTFGN--LRNLKRLGLNNNHLTSLTLELSF 341 (1002)
Q Consensus 265 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~L~~N~l~~l~~~~~~ 341 (1002)
...+..+++|++|+|++|++++.+|..+.+++ +|++|+|++|++++.+|..+.. +++|++|+|++|+++....
T Consensus 336 ~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p---- 411 (768)
T 3rgz_A 336 MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIP---- 411 (768)
T ss_dssp HHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECC----
T ss_pred HHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccC----
Confidence 76688899999999999999999999998887 8999999999998888888877 7889999999998885322
Q ss_pred hcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccC
Q 037042 342 LSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGK 421 (1002)
Q Consensus 342 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 421 (1002)
..+.++++|++|+|++|++.+..+.. +.. .++|+.|++++|++++.+|..+..+++|++|+|++|++++.+|..+.+
T Consensus 412 -~~l~~l~~L~~L~Ls~N~l~~~~p~~-l~~-l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 488 (768)
T 3rgz_A 412 -PTLSNCSELVSLHLSFNYLSGTIPSS-LGS-LSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 488 (768)
T ss_dssp -GGGGGCTTCCEEECCSSEEESCCCGG-GGG-CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGG
T ss_pred -HHHhcCCCCCEEECcCCcccCcccHH-Hhc-CCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhc
Confidence 24778889999999999988765532 333 347899999999999899999999999999999999999888999999
Q ss_pred CCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccc----------
Q 037042 422 LQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTF---------- 491 (1002)
Q Consensus 422 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~---------- 491 (1002)
+++|++|+|++|++++.+|.++..+++|++|+|++|++++.+|..++.+++|+.|++++|++.+.+|..+
T Consensus 489 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~ 568 (768)
T 3rgz_A 489 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 568 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCS
T ss_pred CCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhh
Confidence 9999999999999998899999999999999999999998899999999999999999998887666543
Q ss_pred ------------------------------------------------------------cccccCceeeccCCCCCCCC
Q 037042 492 ------------------------------------------------------------WNLKDILYLNLSSNSLTGPL 511 (1002)
Q Consensus 492 ------------------------------------------------------------~~l~~L~~L~Ls~N~l~~~~ 511 (1002)
.++++|++|||++|+++|.+
T Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~i 648 (768)
T 3rgz_A 569 FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYI 648 (768)
T ss_dssp TTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCC
T ss_pred ccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccC
Confidence 34578999999999999999
Q ss_pred cccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCC
Q 037042 512 PLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLS 591 (1002)
Q Consensus 512 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 591 (1002)
|..+++++.|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..|+.+++|++|||++|+++|.+|.. ..+.
T Consensus 649 p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~ 727 (768)
T 3rgz_A 649 PKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFE 727 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGG
T ss_pred CHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999965 3455
Q ss_pred ccceeeCCCCc-Ccc
Q 037042 592 YLKDLNLSFNK-LEG 605 (1002)
Q Consensus 592 ~L~~L~Ls~N~-l~~ 605 (1002)
++....+.+|+ +.|
T Consensus 728 ~~~~~~~~gN~~Lcg 742 (768)
T 3rgz_A 728 TFPPAKFLNNPGLCG 742 (768)
T ss_dssp GSCGGGGCSCTEEES
T ss_pred cCCHHHhcCCchhcC
Confidence 66667788887 444
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.3e-62 Score=604.04 Aligned_cols=550 Identities=20% Similarity=0.229 Sum_probs=369.9
Q ss_pred CcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEe
Q 037042 53 HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLN 132 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~ 132 (1002)
.+++.|+|++|++++..+..++++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|...|.++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS-QLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccC-ccChhhhccCCCCCEEE
Confidence 57999999999999887888999999999999999999999999999999999999999998 78888788999999999
Q ss_pred CCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhH-HhhhchhhcccCCcc
Q 037042 133 LSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQ-IFVKNIFVQFSHNFS 211 (1002)
Q Consensus 133 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~~~~~~~~~~~~n~~ 211 (1002)
|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..+.. .......+++++|.+
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 9999999888889999999999999999999999999999999999999999999876544321 224567788888888
Q ss_pred cCCCCccccCcccc---------------------------ceeeccCcccccccccccccccc--cceeecccCCCccc
Q 037042 212 KCEIPNEIGNLRNL---------------------------EVLALGLNKLVGVIPAEIFNMST--IQGVGLQNNSLSGS 262 (1002)
Q Consensus 212 ~~~~p~~l~~l~~L---------------------------~~L~L~~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~ 262 (1002)
.+..|..++.+.+| +.|++++|++++..|..+.+++. |+.|+|++|++++.
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 87777777766554 55555555555555555555543 66666666665532
Q ss_pred cCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCC-----CCc----cccccccccchhccccccCc
Q 037042 263 LQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSG-----FIP----STFGNLRNLKRLGLNNNHLT 333 (1002)
Q Consensus 263 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----~~p----~~~~~l~~L~~L~L~~N~l~ 333 (1002)
. ...|..+++|++|+|++|++++..|..|.++++|++|+|++|...+ .+| ..|+.+++|++|++++|+++
T Consensus 264 ~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 264 G-NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp C-TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred C-cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccC
Confidence 2 2234555666666666666665555566666666666666554332 112 24555666666666666666
Q ss_pred cchhhhhhhcccCCCCCCcEEeCCCCCCCCccc-ccccccc-cccccEEecCCCCCCCCCCcccCCCCCccEEEccCCcc
Q 037042 334 SLTLELSFLSSLSNCKYLEFIDLSSNSIDGILS-RKSVGNL-SHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNL 411 (1002)
Q Consensus 334 ~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~~~-~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 411 (1002)
.++.. .|.++++|++|++++|.+..... ...+..+ ..+|+.|++++|++++..|..|..+++|+.|+|++|++
T Consensus 343 ~~~~~-----~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 417 (680)
T 1ziw_A 343 GIKSN-----MFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEI 417 (680)
T ss_dssp CCCTT-----TTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCChh-----HhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcC
Confidence 55432 25556666666666665432111 1111111 13566666666666666666666666666666666666
Q ss_pred CccCC-ccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCC--ccCCccccCCccCcccccccccccccCC
Q 037042 412 NGSIP-ITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS--GSIPACFGDLASLRNLSLASNELISVIP 488 (1002)
Q Consensus 412 ~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 488 (1002)
++.+| ..|.++++|++|++++|++.+..+..|..+++|+.|++++|.++ +..|..|..+++|+.|++++|+++++.+
T Consensus 418 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~ 497 (680)
T 1ziw_A 418 GQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANIND 497 (680)
T ss_dssp EEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCT
T ss_pred ccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCCh
Confidence 55444 45666666666666666666555666666666666666666654 3455666666666666666666666655
Q ss_pred ccccccccCceeeccCCCCCCCC--------cccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCC
Q 037042 489 STFWNLKDILYLNLSSNSLTGPL--------PLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIP 560 (1002)
Q Consensus 489 ~~~~~l~~L~~L~Ls~N~l~~~~--------~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 560 (1002)
..|.++++|++|++++|++++.. +..|.++++|+.|+|++|+++.+.+..|.++++|+.|+|++|+|++..+
T Consensus 498 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 577 (680)
T 1ziw_A 498 DMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPA 577 (680)
T ss_dssp TTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred hhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCH
Confidence 56666666666666666665421 1225556666666666666665444556666666666666666665555
Q ss_pred cccccccccceeccccccccCCCccccc-CCCccceeeCCCCcCcccCCC
Q 037042 561 DSFGDLMSLKSLNLSNNNLSGSIPVSLE-KLSYLKDLNLSFNKLEGEIPK 609 (1002)
Q Consensus 561 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~ 609 (1002)
..|..+++|+.|+|++|+|++..|..+. .+++|+.|+|++|++.+..+.
T Consensus 578 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 578 SVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred hHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 5566666666666666666655555554 456666666666666665543
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.9e-59 Score=576.30 Aligned_cols=564 Identities=24% Similarity=0.261 Sum_probs=443.3
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N 136 (1002)
.+|.++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..| ..|.++++|++|+|++|
T Consensus 8 ~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 8 VADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEP-ELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp EEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCT-THHHHCTTCCEEECCSS
T ss_pred eeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCH-HHHhcccCcCEEECCCC
Confidence 5777888887 6888776 799999999999998888889999999999999999996555 45578999999999999
Q ss_pred cccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCC
Q 037042 137 MFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIP 216 (1002)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p 216 (1002)
++++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..+..+ ........+.+++|.+.+..|
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~ 162 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQ-VQLENLQELLLSNNKIQALKS 162 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSS-SCCTTCCEEECCSSCCCCBCH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhh-cccccCCEEEccCCcccccCH
Confidence 9997666689999999999999999998778899999999999999999998655433 345566778888888776666
Q ss_pred cccc--CccccceeeccCccccccccccccccccc---------------------------ceeecccCCCccccCCcc
Q 037042 217 NEIG--NLRNLEVLALGLNKLVGVIPAEIFNMSTI---------------------------QGVGLQNNSLSGSLQSIP 267 (1002)
Q Consensus 217 ~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L---------------------------~~L~L~~N~l~~~~~~~~ 267 (1002)
..++ .+++|++|++++|++++..|..+..+.+| +.|++++|++++..+ ..
T Consensus 163 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~-~~ 241 (680)
T 1ziw_A 163 EELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSN-TT 241 (680)
T ss_dssp HHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECT-TT
T ss_pred HHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccCh-hH
Confidence 6654 45889999999999988888877766544 445555555543322 22
Q ss_pred ccCCC--ccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCc------cchhhh
Q 037042 268 YVRLP--NLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT------SLTLEL 339 (1002)
Q Consensus 268 ~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~------~l~~~~ 339 (1002)
|..++ +|++|+|++|++++..|..|..+++|++|+|++|++++..|..|+++++|+.|++++|... .+|.-
T Consensus 242 ~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i- 320 (680)
T 1ziw_A 242 FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKI- 320 (680)
T ss_dssp TGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEE-
T ss_pred hhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccccccccccc-
Confidence 33333 3777777777776666666666777777777777777666667777777777777665433 11100
Q ss_pred hhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCC--CcccCCC--CCccEEEccCCccCccC
Q 037042 340 SFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSI--PEEIGNL--TNLIGFYLGGNNLNGSI 415 (1002)
Q Consensus 340 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~--p~~~~~l--~~L~~L~L~~N~l~~~~ 415 (1002)
....|..+++|++|++++|.+.++.+. .+.. .++|++|++++|.++... +..|..+ ++|+.|++++|++++..
T Consensus 321 -~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~-l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~ 397 (680)
T 1ziw_A 321 -DDFSFQWLKCLEHLNMEDNDIPGIKSN-MFTG-LINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIE 397 (680)
T ss_dssp -CTTTTTTCTTCCEEECCSCCBCCCCTT-TTTT-CTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEEC
T ss_pred -ChhhcccCCCCCEEECCCCccCCCChh-Hhcc-ccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEC
Confidence 001366777777777777777765432 1222 346777787777654322 2233333 47888888888888888
Q ss_pred CccccCCCCCCEEEccCCcccccCC-ccccCCccccEEEccCCcCCccCCccccCCccCccccccccccc--ccCCcccc
Q 037042 416 PITLGKLQKLQVLYFPDNKLEGSIP-DEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELI--SVIPSTFW 492 (1002)
Q Consensus 416 p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~~~~~~ 492 (1002)
|..|..+++|+.|+|++|.+++.+| ..+.++++|++|++++|++.+..+..|..+++|+.|++++|.+. +..|..|.
T Consensus 398 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~ 477 (680)
T 1ziw_A 398 SDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQ 477 (680)
T ss_dssp TTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTT
T ss_pred hhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccc
Confidence 8899999999999999999987666 67888999999999999999888899999999999999999886 56788999
Q ss_pred ccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCc--------ccccCCccccEEEccCeeecccCCcccc
Q 037042 493 NLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIP--------NAIGGIKDLQFLFLEYNILQGSIPDSFG 564 (1002)
Q Consensus 493 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 564 (1002)
++++|++|++++|++++..+..|.++++|+.|+|++|++++..+ ..|.++++|+.|+|++|+++...+..|.
T Consensus 478 ~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 557 (680)
T 1ziw_A 478 PLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFK 557 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcc
Confidence 99999999999999998888889999999999999999987532 2478999999999999999966666799
Q ss_pred cccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCCC-C-CCCCCccccccCCCCCCCC
Q 037042 565 DLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG-G-SFGNFSAESFEGNKLLCGS 630 (1002)
Q Consensus 565 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~-~~~~~~~~~~~~n~~~c~~ 630 (1002)
++++|+.|+|++|+|++..+..|..+++|+.|+|++|++++.+|.. + .+..+....+.||++.|.-
T Consensus 558 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 558 DLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred cccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 9999999999999999877778899999999999999999877642 1 3566777889999999853
No 5
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.4e-61 Score=585.14 Aligned_cols=494 Identities=17% Similarity=0.234 Sum_probs=299.1
Q ss_pred CCCChhHHHHHHHHHHhccCCCCCcc------ccCCCCCCCCCcc---cccEeeCCCCcEEEEEeCCCCCccccCcccCC
Q 037042 5 TSNITTDLDALHALKTHITNDPTNFF------AKNWNSSISFCNW---TGVTCDVHSHRVTALNISHLSLSGTIPSRLGN 75 (1002)
Q Consensus 5 ~~~~~~~~~~l~~~k~~~~~~~~~~~------~~~w~~~~~~c~w---~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~ 75 (1002)
+.....|++||.++|+++..+.+.+. ..+|+.+.+||.| .||+|+.. +||+.|+|++++++|.+|++|++
T Consensus 25 ~~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~ 103 (636)
T 4eco_A 25 TAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQ 103 (636)
T ss_dssp CCHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGG
T ss_pred hhhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhc
Confidence 34446799999999999866555421 1379999999999 99999876 89999999999999999999999
Q ss_pred CCCCCEEEcccCCC------CC------CCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCC---------
Q 037042 76 LSSLQSLFLHSNQF------SG------SIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLS--------- 134 (1002)
Q Consensus 76 l~~L~~L~L~~N~l------~~------~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls--------- 134 (1002)
|++|++|+|++|.+ .| .+|... +.+|+ +++++|.+.+.+|..+...+..+..+++.
T Consensus 104 L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 180 (636)
T 4eco_A 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSR 180 (636)
T ss_dssp CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCC
T ss_pred CccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccc
Confidence 99999999999987 33 455554 67788 99999999988887664222222222222
Q ss_pred -----------CCcccccCCccccCCCCCceEEcccccCCCC-----------------Cccccc--cccccceeeeccc
Q 037042 135 -----------KNMFHGGIPSALSNCTYLRILRLSYNDFAGG-----------------IPKEIG--NLTKLEELYLSFN 184 (1002)
Q Consensus 135 -----------~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~Ls~N 184 (1002)
+|+++| +|..|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|
T Consensus 181 ~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n 259 (636)
T 4eco_A 181 ITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNC 259 (636)
T ss_dssp CCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECC
T ss_pred cchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCC
Confidence 467776 677777777777777777777764 666666 6777777777776
Q ss_pred cccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcc-ccc-ccccccccccccceeecccCCCccc
Q 037042 185 GLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNK-LVG-VIPAEIFNMSTIQGVGLQNNSLSGS 262 (1002)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~ 262 (1002)
.+.+ .+|..++++++|++|+|++|+ +++ .+|..++.+.
T Consensus 260 ~l~~-------------------------~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~--------------- 299 (636)
T 4eco_A 260 PNLT-------------------------KLPTFLKALPEMQLINVACNRGISGEQLKDDWQALA--------------- 299 (636)
T ss_dssp TTCS-------------------------SCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHH---------------
T ss_pred cCCc-------------------------cChHHHhcCCCCCEEECcCCCCCccccchHHHHhhh---------------
Confidence 6654 466666677777777777776 666 5666665541
Q ss_pred cCCccccCCCccchhhcccccccccccc--cccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhh
Q 037042 263 LQSIPYVRLPNLEELYLWGNHFSGSIPN--FIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELS 340 (1002)
Q Consensus 263 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~ 340 (1002)
.+..+++|++|+|++|+++ .+|. .+.++++|++|+|++|+++|.+| .|+++++|++|+|++|+++.+|..
T Consensus 300 ----~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~-- 371 (636)
T 4eco_A 300 ----DAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPAN-- 371 (636)
T ss_dssp ----HSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTT--
T ss_pred ----ccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccHh--
Confidence 0112356666666677776 5666 67777777778887777777777 777777777777777777766532
Q ss_pred hhcccCCCCC-CcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCC--CccEEEccCCccCccCCc
Q 037042 341 FLSSLSNCKY-LEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLT--NLIGFYLGGNNLNGSIPI 417 (1002)
Q Consensus 341 ~~~~l~~l~~-L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~ 417 (1002)
+..+++ |++|++++|.++.+ |..+..++ +|+.|++++|++++.+|.
T Consensus 372 ----l~~l~~~L~~L~Ls~N~l~~l---------------------------p~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 420 (636)
T 4eco_A 372 ----FCGFTEQVENLSFAHNKLKYI---------------------------PNIFDAKSVSVMSAIDFSYNEIGSVDGK 420 (636)
T ss_dssp ----SEEECTTCCEEECCSSCCSSC---------------------------CSCCCTTCSSCEEEEECCSSCTTTTTTC
T ss_pred ----hhhhcccCcEEEccCCcCccc---------------------------chhhhhcccCccCEEECcCCcCCCcchh
Confidence 455555 66666666655532 22332222 444444444444444444
Q ss_pred ccc-------CCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCcccc-------CCccCcccccccccc
Q 037042 418 TLG-------KLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFG-------DLASLRNLSLASNEL 483 (1002)
Q Consensus 418 ~~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-------~l~~L~~L~L~~N~l 483 (1002)
.|. .+++|++|+|++|+++...+..+..+++|+.|+|++|+++.+.+..+. ++++|+.|+|++|++
T Consensus 421 ~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 500 (636)
T 4eco_A 421 NFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKL 500 (636)
T ss_dssp SSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCC
T ss_pred hhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcC
Confidence 443 333444444444444422222222344444444444444421111111 111333333333333
Q ss_pred cccCCcccc--ccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCc
Q 037042 484 ISVIPSTFW--NLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD 561 (1002)
Q Consensus 484 ~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 561 (1002)
+. +|..+. .+++|+.|+|++|++++ +|..+.++++|+.|+|++|+ ++++|++.+.+|.
T Consensus 501 ~~-lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~------------------~ls~N~l~~~~p~ 560 (636)
T 4eco_A 501 TK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR------------------DAQGNRTLREWPE 560 (636)
T ss_dssp CB-CCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCB------------------CTTCCBCCCCCCT
T ss_pred Cc-cChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCc------------------ccccCcccccChH
Confidence 31 222222 33333333333333333 33333333333333333322 2245666666666
Q ss_pred ccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcc
Q 037042 562 SFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEG 605 (1002)
Q Consensus 562 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 605 (1002)
.|+.+++|+.|+|++|+| +.+|..+. ++|+.|+|++|++..
T Consensus 561 ~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 561 GITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp TGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred HHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 666666666666666666 35565544 566677777776653
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.6e-59 Score=565.37 Aligned_cols=516 Identities=22% Similarity=0.183 Sum_probs=395.9
Q ss_pred cEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeC
Q 037042 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNL 133 (1002)
Q Consensus 54 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L 133 (1002)
.++.|+|++|.+++..|..|+++++|++|+|++|++++..|.+|.++++|++|+|++|++++..|.. ++++++|++|+|
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~L 112 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETA-LSGPKALKHLFF 112 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTT-TSSCTTCCEEEC
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhh-hcccccccEeec
Confidence 5667777777777666666777777777777777777666667777777777777777776444433 356777777777
Q ss_pred CCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccC
Q 037042 134 SKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKC 213 (1002)
Q Consensus 134 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~ 213 (1002)
++|++++..|..|+++++|++|+|++|++++..++.+.++++|++|+|++|.+++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~------------------------- 167 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHY------------------------- 167 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCE-------------------------
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccc-------------------------
Confidence 7777776556666777777777777777765333334446777777777776664
Q ss_pred CCCccccCccccc--eeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccc-----cccc
Q 037042 214 EIPNEIGNLRNLE--VLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGN-----HFSG 286 (1002)
Q Consensus 214 ~~p~~l~~l~~L~--~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N-----~l~~ 286 (1002)
..|..++.+++|+ .|++++|++++..|..+. ..+|+.|++++|.... ..+..+.++....+..+ ....
T Consensus 168 ~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~~~~~~----~~~~~l~~~~l~~l~~~~~~~~~~~~ 242 (606)
T 3t6q_A 168 LSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFD-SAVFQSLNFGGTQNLL----VIFKGLKNSTIQSLWLGTFEDMDDED 242 (606)
T ss_dssp ECHHHHHTTTTCCSEEEECTTCCCCEECTTTTT-TCEEEEEECTTCSCHH----HHHHHTTTCEEEEEECCCCTTSCCCC
T ss_pred cChhhhhhhcccceeEEecCCCccCccChhHhh-hccccccccCCchhHH----HHhhhccccchhheechhhccccccc
Confidence 2344556666666 677777777765555443 3567777777665210 00111111111111111 1111
Q ss_pred cccccccccC--CCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCc
Q 037042 287 SIPNFIFNAS--KLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGI 364 (1002)
Q Consensus 287 ~~p~~~~~l~--~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 364 (1002)
..+..+..+. +|++|++++|+++++.+..|+++++|++|+|++|+++.+|.. +.++++|++|++++|.+.++
T Consensus 243 i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~------l~~l~~L~~L~l~~n~l~~~ 316 (606)
T 3t6q_A 243 ISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPSG------LVGLSTLKKLVLSANKFENL 316 (606)
T ss_dssp CCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCSS------CCSCTTCCEEECTTCCCSBG
T ss_pred cChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCChh------hcccccCCEEECccCCcCcC
Confidence 2223333332 789999999999998888899999999999999999988753 67889999999999999876
Q ss_pred ccccccccccccccEEecCCCCCCCCCCc-ccCCCCCccEEEccCCccCccC--CccccCCCCCCEEEccCCcccccCCc
Q 037042 365 LSRKSVGNLSHSLKIFDMSDCNVSGSIPE-EIGNLTNLIGFYLGGNNLNGSI--PITLGKLQKLQVLYFPDNKLEGSIPD 441 (1002)
Q Consensus 365 ~~~~~~~~~~~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~ 441 (1002)
.+. .+.. .++|+.|++++|.+.+.+|. .+..+++|++|++++|++++.. |..+..+++|++|++++|++.+..|.
T Consensus 317 ~~~-~~~~-l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 394 (606)
T 3t6q_A 317 CQI-SASN-FPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTE 394 (606)
T ss_dssp GGG-CGGG-CTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTT
T ss_pred chh-hhhc-cCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHH
Confidence 442 2333 35799999999999877665 4899999999999999999776 78899999999999999999999999
Q ss_pred cccCCccccEEEccCCcCCccCCc-cccCCccCcccccccccccccCCccccccccCceeeccCCCCCC---CCcccccc
Q 037042 442 EVCRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTG---PLPLEIGN 517 (1002)
Q Consensus 442 ~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---~~~~~~~~ 517 (1002)
.+..+++|+.|++++|++++..|. .|..+++|+.|++++|.+.+..|..|.++++|++|++++|++++ ..+..+..
T Consensus 395 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~ 474 (606)
T 3t6q_A 395 AFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQT 474 (606)
T ss_dssp TTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGG
T ss_pred HhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhcc
Confidence 999999999999999999877654 48999999999999999999999999999999999999999986 23467899
Q ss_pred cccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceee
Q 037042 518 LKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLN 597 (1002)
Q Consensus 518 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 597 (1002)
+++|+.|++++|++++..|.+|+++++|+.|+|++|++++.+|..|..+++| .|+|++|++++.+|..+..+++|+.|+
T Consensus 475 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~ 553 (606)
T 3t6q_A 475 LGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTIN 553 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEE
T ss_pred CCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEe
Confidence 9999999999999999999999999999999999999999999999999999 999999999998898899999999999
Q ss_pred CCCCcCcccCCC
Q 037042 598 LSFNKLEGEIPK 609 (1002)
Q Consensus 598 Ls~N~l~~~~p~ 609 (1002)
+++|++++..+.
T Consensus 554 l~~N~~~c~c~~ 565 (606)
T 3t6q_A 554 LRQNPLDCTCSN 565 (606)
T ss_dssp CTTCCEECSGGG
T ss_pred CCCCCccccCCc
Confidence 999999987764
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.2e-58 Score=560.86 Aligned_cols=512 Identities=20% Similarity=0.172 Sum_probs=367.2
Q ss_pred cEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeC
Q 037042 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNL 133 (1002)
Q Consensus 54 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L 133 (1002)
+++.|+|++|.+++..|..++++++|++|+|++|++++..|..|.++++|++|+|++|++++..|.. |+++++|++|+|
T Consensus 33 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~L~L 111 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGS-FSGLTSLENLVA 111 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTS-STTCTTCCEEEC
T ss_pred CcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhh-cCCcccCCEEEc
Confidence 4555555555555544445555555555555555555545555555555555555555555333322 344555555555
Q ss_pred CCCcccccCCccccCCCCCceEEcccccCCC-CCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCccc
Q 037042 134 SKNMFHGGIPSALSNCTYLRILRLSYNDFAG-GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSK 212 (1002)
Q Consensus 134 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~ 212 (1002)
++|++++..|..|+++++|++|+|++|++++ .+|..|+++++|++|+|++|++++.
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~----------------------- 168 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTI----------------------- 168 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEE-----------------------
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceec-----------------------
Confidence 5555554444555555555555555555543 3455555555555555555555431
Q ss_pred CCCCccccCccccc----eeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccccccc-
Q 037042 213 CEIPNEIGNLRNLE----VLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGS- 287 (1002)
Q Consensus 213 ~~~p~~l~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~- 287 (1002)
.|..++.+++|+ +|++++|++++..+..+... +|+.|++++|.+++......+..+++|+.+++..+.+.+.
T Consensus 169 --~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~ 245 (606)
T 3vq2_A 169 --TVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDER 245 (606)
T ss_dssp --CTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSC
T ss_pred --ChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCC
Confidence 233344444433 45555555554333333322 5555555555554332222334455555555443333211
Q ss_pred -----ccccccccC--CCCeeec-CCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCC
Q 037042 288 -----IPNFIFNAS--KLSRLEL-QKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSN 359 (1002)
Q Consensus 288 -----~p~~~~~l~--~L~~L~L-~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N 359 (1002)
.+..+..+. +++.+++ ..|.+.+.+|. |..+++|+.|++++|.++.++ .+..+++|+.|++++|
T Consensus 246 ~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~-------~l~~~~~L~~L~l~~n 317 (606)
T 3vq2_A 246 NLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE-------DVPKHFKWQSLSIIRC 317 (606)
T ss_dssp CCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC-------CCCTTCCCSEEEEESC
T ss_pred cccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchhhh-------hccccccCCEEEcccc
Confidence 111111111 3445555 77888888887 999999999999999999876 3778899999999999
Q ss_pred CCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCcc--CCccccCCCCCCEEEccCCcccc
Q 037042 360 SIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGS--IPITLGKLQKLQVLYFPDNKLEG 437 (1002)
Q Consensus 360 ~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~ 437 (1002)
.+..+. .+ ..++|+.|++++|+..+.+ .+..+++|++|++++|++++. .|..+..+++|++|++++|.+++
T Consensus 318 ~l~~lp---~~--~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~ 390 (606)
T 3vq2_A 318 QLKQFP---TL--DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII 390 (606)
T ss_dssp CCSSCC---CC--CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE
T ss_pred cCcccc---cC--CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc
Confidence 996553 12 3468999999999665433 678999999999999999876 48889999999999999999985
Q ss_pred cCCccccCCccccEEEccCCcCCccCC-ccccCCccCcccccccccccccCCccccccccCceeeccCCCCCC-CCcccc
Q 037042 438 SIPDEVCRLAKVYQLDLSNNKLSGSIP-ACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTG-PLPLEI 515 (1002)
Q Consensus 438 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~ 515 (1002)
+|..+..+++|+.|++++|++.+..| ..|..+++|+.|++++|.+.+..|..|.++++|++|++++|++++ .+|..+
T Consensus 391 -~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 469 (606)
T 3vq2_A 391 -MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVF 469 (606)
T ss_dssp -ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCC
T ss_pred -chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhh
Confidence 66889999999999999999998877 789999999999999999999999999999999999999999997 478889
Q ss_pred cccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCC-ccc
Q 037042 516 GNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLS-YLK 594 (1002)
Q Consensus 516 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~ 594 (1002)
..+++|+.|+|++|++++..|..|+++++|+.|+|++|++++.+|..|..+++|+.|+|++|+|+ .+|..+..++ +|+
T Consensus 470 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~ 548 (606)
T 3vq2_A 470 ANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLA 548 (606)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCC
T ss_pred ccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCc
Confidence 99999999999999999999999999999999999999999988999999999999999999999 6777788887 599
Q ss_pred eeeCCCCcCcccCCC
Q 037042 595 DLNLSFNKLEGEIPK 609 (1002)
Q Consensus 595 ~L~Ls~N~l~~~~p~ 609 (1002)
.|++++|++.+..+.
T Consensus 549 ~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 549 FFNLTNNSVACICEH 563 (606)
T ss_dssp EEECCSCCCCCSSTT
T ss_pred EEEccCCCcccCCcc
Confidence 999999999988775
No 8
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.5e-58 Score=567.68 Aligned_cols=513 Identities=19% Similarity=0.235 Sum_probs=332.8
Q ss_pred CCCCChhHHHHHHHHHHhccCCCCCccccCCCCCC-----CC--Ccc------------cccEeeCCCCcEEEEEeCCCC
Q 037042 4 NTSNITTDLDALHALKTHITNDPTNFFAKNWNSSI-----SF--CNW------------TGVTCDVHSHRVTALNISHLS 64 (1002)
Q Consensus 4 ~~~~~~~~~~~l~~~k~~~~~~~~~~~~~~w~~~~-----~~--c~w------------~gv~c~~~~~~v~~L~l~~~~ 64 (1002)
.+.+..+|++||++||+++. +| +|+.+. +| |+| .||+|+. +++|+.|+|++++
T Consensus 263 ~~~~~~~d~~ALl~~k~~l~-~~------~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~ 334 (876)
T 4ecn_A 263 ETAEYIKDYKALKAIWEALD-GK------NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFG 334 (876)
T ss_dssp CCCHHHHHHHHHHHHHHHTT-GG------GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTC
T ss_pred ccccchHHHHHHHHHHHHcC-CC------CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCC
Confidence 34555789999999999994 45 686544 55 999 9999998 5899999999999
Q ss_pred CccccCcccCCCCCCCEEEc-ccCCCCCCCCcccccc----c-----CCcEEE-------ecccccccccC---------
Q 037042 65 LSGTIPSRLGNLSSLQSLFL-HSNQFSGSIPFSIFNI----H-----TLKLLS-------FGDNQLSGEIP--------- 118 (1002)
Q Consensus 65 l~~~~p~~l~~l~~L~~L~L-~~N~l~~~~p~~~~~l----~-----~L~~L~-------L~~N~l~~~ip--------- 118 (1002)
+.|.+|++|++|++|++|+| ++|.++|..|..-... . .++... .....+++.++
T Consensus 335 L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 335 AKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp CEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred CCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 99999999999999999999 9999988866442221 0 000000 00011111110
Q ss_pred -cccCCCCCCCCEEeCCC--CcccccCCccccCCCCCceEEcccccCCC-----------------CCccccc--ccccc
Q 037042 119 -TNICSNLPFFESLNLSK--NMFHGGIPSALSNCTYLRILRLSYNDFAG-----------------GIPKEIG--NLTKL 176 (1002)
Q Consensus 119 -~~~~~~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L 176 (1002)
.........++.+.+.. |++++ +|..|+++++|++|+|++|+|+| .+|..++ ++++|
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L 493 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDL 493 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTC
T ss_pred cccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCC
Confidence 00012233444444444 77776 77778888888888888888776 2666655 66666
Q ss_pred ceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcc-ccc-ccccccccccccceeec
Q 037042 177 EELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNK-LVG-VIPAEIFNMSTIQGVGL 254 (1002)
Q Consensus 177 ~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~~L~~L~L 254 (1002)
++|+|++|.+.+ .+|..|+++++|++|+|++|+ +++ .+|..++.++
T Consensus 494 ~~L~Ls~N~l~~-------------------------~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~------- 541 (876)
T 4ecn_A 494 TDVELYNCPNMT-------------------------QLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLA------- 541 (876)
T ss_dssp CEEEEESCTTCC-------------------------SCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHH-------
T ss_pred CEEECcCCCCCc-------------------------cChHHHhCCCCCCEEECcCCCCcccccchHHHHhhh-------
Confidence 666666666654 456666666666666666666 666 5666555443
Q ss_pred ccCCCccccCCccccCCCccchhhcccccccccccc--cccccCCCCeeecCCCccCCCCccccccccccchhccccccC
Q 037042 255 QNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPN--FIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHL 332 (1002)
Q Consensus 255 ~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 332 (1002)
..+..+++|++|+|++|+++ .+|. .+.++++|++|+|++|+|+ .+| .|+++++|+.|+|++|++
T Consensus 542 -----------~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l 607 (876)
T 4ecn_A 542 -----------DDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQI 607 (876)
T ss_dssp -----------HCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCC
T ss_pred -----------hcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCcc
Confidence 01234556777777777776 5666 6777777777777777777 555 677777777777777777
Q ss_pred ccchhhhhhhcccCCCCC-CcEEeCCCCCCCCccccccccccc-ccccEEecCCCCCCCCCCccc---C--CCCCccEEE
Q 037042 333 TSLTLELSFLSSLSNCKY-LEFIDLSSNSIDGILSRKSVGNLS-HSLKIFDMSDCNVSGSIPEEI---G--NLTNLIGFY 405 (1002)
Q Consensus 333 ~~l~~~~~~~~~l~~l~~-L~~L~Ls~N~l~~~~~~~~~~~~~-~~L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~ 405 (1002)
+.+|.. +..+++ |+.|+|++|.|..++ ..+.... ++|+.|+|++|++++.+|... . .+++|+.|+
T Consensus 608 ~~lp~~------l~~l~~~L~~L~Ls~N~L~~lp--~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~ 679 (876)
T 4ecn_A 608 EEIPED------FCAFTDQVEGLGFSHNKLKYIP--NIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVT 679 (876)
T ss_dssp SCCCTT------SCEECTTCCEEECCSSCCCSCC--SCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEE
T ss_pred ccchHH------HhhccccCCEEECcCCCCCcCc--hhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEE
Confidence 766532 566666 777777777776442 1122111 236677777777766555322 2 234777777
Q ss_pred ccCCccCccCCcc-ccCCCCCCEEEccCCcccccCCccccCC--------ccccEEEccCCcCCccCCcccc--CCccCc
Q 037042 406 LGGNNLNGSIPIT-LGKLQKLQVLYFPDNKLEGSIPDEVCRL--------AKVYQLDLSNNKLSGSIPACFG--DLASLR 474 (1002)
Q Consensus 406 L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l--------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~ 474 (1002)
|++|+++. +|.. +..+++|+.|+|++|+++ .+|..+... ++|+.|+|++|+|+ .+|..+. .+++|+
T Consensus 680 Ls~N~L~~-lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~ 756 (876)
T 4ecn_A 680 LSYNEIQK-FPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLS 756 (876)
T ss_dssp CCSSCCCS-CCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCC
T ss_pred ccCCcCCc-cCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcC
Confidence 77777773 4443 446777777777777777 455443332 26777777777776 4566555 667777
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
.|+|++|++++ +|..+.++++|+.|+|++|+ ++++|++.+.+|..|.++++|+.|+|++|+
T Consensus 757 ~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~ 817 (876)
T 4ecn_A 757 NMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSND 817 (876)
T ss_dssp EEECCSSCCSS-CCCGGGGCTTCCEEECCCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSC
T ss_pred EEEeCCCCCCc-cchhhhcCCCCCEEECCCCC------------------CcccccccccChHHHhcCCCCCEEECCCCC
Confidence 77777777766 46666667777777776654 445566777777777777777777777777
Q ss_pred ecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCc
Q 037042 555 LQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604 (1002)
Q Consensus 555 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 604 (1002)
| +.+|..+. ++|+.|+|++|++....+..+.....+..+.|++|++.
T Consensus 818 L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 818 I-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp C-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred C-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 7 46666554 46777777777776555555555555556666666554
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3e-57 Score=550.86 Aligned_cols=530 Identities=20% Similarity=0.217 Sum_probs=458.1
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N 136 (1002)
.++.++.+++ .+|..+.. ++++|+|++|.+++..|..|+++++|++|+|++|++.+..| ..|.++++|++|+|++|
T Consensus 16 ~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n 91 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHE-DTFQSQHRLDTLVLTAN 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECT-TTTTTCTTCCEEECTTC
T ss_pred eEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeCh-hhccCccccCeeeCCCC
Confidence 5667777787 78887765 79999999999998889999999999999999999996444 45578999999999999
Q ss_pred cccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCC
Q 037042 137 MFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIP 216 (1002)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p 216 (1002)
++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++. .+|
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~------------------------~~~ 147 (606)
T 3t6q_A 92 PLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSI------------------------KLP 147 (606)
T ss_dssp CCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCC------------------------CCC
T ss_pred cccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCccccc------------------------Ccc
Confidence 99999999999999999999999999977788899999999999999999853 224
Q ss_pred ccccCccccceeeccCcccccccccccccccccc--eeecccCCCccccCCccccCCCccchhhcccccccccccccccc
Q 037042 217 NEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQ--GVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFN 294 (1002)
Q Consensus 217 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~--~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 294 (1002)
..+ .+++|++|++++|++++..|..+..+++|+ .|++++|++++..+.. | ...+|++|++++|. .++..+..
T Consensus 148 ~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~-~-~~~~L~~L~l~~~~---~~~~~~~~ 221 (606)
T 3t6q_A 148 KGF-PTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGA-F-DSAVFQSLNFGGTQ---NLLVIFKG 221 (606)
T ss_dssp TTC-CCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTT-T-TTCEEEEEECTTCS---CHHHHHHH
T ss_pred ccc-CCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhH-h-hhccccccccCCch---hHHHHhhh
Confidence 433 499999999999999998899999999999 8999999998655443 3 34689999999997 34455555
Q ss_pred cCCCCeeecCCCc-----cCCCCcccccccc--ccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccc
Q 037042 295 ASKLSRLELQKNS-----FSGFIPSTFGNLR--NLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSR 367 (1002)
Q Consensus 295 l~~L~~L~L~~N~-----l~~~~p~~~~~l~--~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~ 367 (1002)
+.++....+.-+. ...+.+..|..+. +|+.|++++|.++.++.. .|..+++|++|++++|.++.++.
T Consensus 222 l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~lp~- 295 (606)
T 3t6q_A 222 LKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN-----TFHCFSGLQELDLTATHLSELPS- 295 (606)
T ss_dssp TTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT-----TTTTCTTCSEEECTTSCCSCCCS-
T ss_pred ccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHH-----HhccccCCCEEeccCCccCCCCh-
Confidence 5555444443322 2234455666665 899999999999998864 38899999999999999997643
Q ss_pred cccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCc-cccCCCCCCEEEccCCcccccC--Ccccc
Q 037042 368 KSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPI-TLGKLQKLQVLYFPDNKLEGSI--PDEVC 444 (1002)
Q Consensus 368 ~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~~~ 444 (1002)
.+.. .++|++|++++|++.+..|..+..+++|++|++++|.+.+.+|. .+..+++|++|++++|.+++.. +..+.
T Consensus 296 -~l~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 373 (606)
T 3t6q_A 296 -GLVG-LSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLR 373 (606)
T ss_dssp -SCCS-CTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTT
T ss_pred -hhcc-cccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcc
Confidence 2333 35899999999999998899999999999999999999976665 5999999999999999999776 78899
Q ss_pred CCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCc-cccccccCceeeccCCCCCCCCccccccccccee
Q 037042 445 RLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPS-TFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVK 523 (1002)
Q Consensus 445 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 523 (1002)
.+++|++|++++|++.+..|..|..+++|+.|++++|++.+..+. .|.++++|++|++++|.+++..|..+..+++|++
T Consensus 374 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 453 (606)
T 3t6q_A 374 NLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQH 453 (606)
T ss_dssp TCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCE
T ss_pred cCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCE
Confidence 999999999999999999999999999999999999999987665 4899999999999999999999999999999999
Q ss_pred eeCCCCccCcc---CcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCC
Q 037042 524 IDFSMNNFSGV---IPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSF 600 (1002)
Q Consensus 524 L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 600 (1002)
|++++|++++. .+..+..+++|+.|+|++|++++.+|..|+.+++|+.|+|++|++++..|..+.++++| .|+|++
T Consensus 454 L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~ 532 (606)
T 3t6q_A 454 LNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLAS 532 (606)
T ss_dssp EECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCS
T ss_pred EECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcC
Confidence 99999999873 34679999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CcCcccCCCC-CCCCCCccccccCCCCCCC
Q 037042 601 NKLEGEIPKG-GSFGNFSAESFEGNKLLCG 629 (1002)
Q Consensus 601 N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~ 629 (1002)
|++++.+|.. ..+..+....+.||++.|.
T Consensus 533 N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 533 NHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp SCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred CcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 9999877753 3445666778899998884
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=7e-57 Score=565.87 Aligned_cols=521 Identities=20% Similarity=0.173 Sum_probs=428.2
Q ss_pred CcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCC-CcccccccCCcEEEecccccccccCc
Q 037042 41 CNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSI-PFSIFNIHTLKLLSFGDNQLSGEIPT 119 (1002)
Q Consensus 41 c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~ip~ 119 (1002)
|.|+.|.+ ...+++.|||++|.+++..|..++++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++.+..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 57888887 4467889999999998888888999999999999988776666 77888899999999999998865554
Q ss_pred ccCCCCCCCCEEeCCCCcccccCCcc--ccCCCCCceEEcccccCCCCCc-cccccccccceeeeccccccccccchhhH
Q 037042 120 NICSNLPFFESLNLSKNMFHGGIPSA--LSNCTYLRILRLSYNDFAGGIP-KEIGNLTKLEELYLSFNGLQGAYDHGFLQ 196 (1002)
Q Consensus 120 ~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 196 (1002)
. |.++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++
T Consensus 92 ~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~-------- 162 (844)
T 3j0a_A 92 A-FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL-------- 162 (844)
T ss_dssp S-SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC--------
T ss_pred H-ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe--------
Confidence 4 467889999999999988766654 8889999999999998887654 578889999999999888875
Q ss_pred HhhhchhhcccCCcccCCCCccccCc--cccceeeccCcccccccccccccccc------cceeecccCCCccccCCccc
Q 037042 197 IFVKNIFVQFSHNFSKCEIPNEIGNL--RNLEVLALGLNKLVGVIPAEIFNMST------IQGVGLQNNSLSGSLQSIPY 268 (1002)
Q Consensus 197 ~~~~~~~~~~~~n~~~~~~p~~l~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~------L~~L~L~~N~l~~~~~~~~~ 268 (1002)
..|..++.+ ++|+.|+|+.|.+++..|..+..+.+ |+.|++++|.+++.++....
T Consensus 163 -----------------~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~ 225 (844)
T 3j0a_A 163 -----------------VCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFS 225 (844)
T ss_dssp -----------------CCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGG
T ss_pred -----------------eCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHH
Confidence 345666666 78999999999999888887776665 89999999988765543322
Q ss_pred c--CCCccchhhcc---------ccccccccccccccc--CCCCeeecCCCccCCCCccccccccccchhccccccCccc
Q 037042 269 V--RLPNLEELYLW---------GNHFSGSIPNFIFNA--SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSL 335 (1002)
Q Consensus 269 ~--~l~~L~~L~Ls---------~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l 335 (1002)
. ....++.|.++ .|.+.+..+..|..+ ++|++|+|++|.+.+..|..|..+++|+.|+|++|+++.+
T Consensus 226 ~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~ 305 (844)
T 3j0a_A 226 NAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKI 305 (844)
T ss_dssp GTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEE
T ss_pred hhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCC
Confidence 1 22456666665 334444444555554 7899999999999999999999999999999999999988
Q ss_pred hhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccC
Q 037042 336 TLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSI 415 (1002)
Q Consensus 336 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 415 (1002)
+.. .|.++++|++|+|++|.+.++.+. .+.. .++|+.|++++|++.+..+..|.++++|+.|+|++|.+++.
T Consensus 306 ~~~-----~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~-l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i- 377 (844)
T 3j0a_A 306 ADE-----AFYGLDNLQVLNLSYNLLGELYSS-NFYG-LPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI- 377 (844)
T ss_dssp CTT-----TTTTCSSCCEEEEESCCCSCCCSC-SCSS-CTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-
T ss_pred ChH-----HhcCCCCCCEEECCCCCCCccCHH-HhcC-CCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-
Confidence 653 488999999999999999877543 2333 35799999999999988888999999999999999999843
Q ss_pred CccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCC-ccccCCccCcccccccccccccCCc-cccc
Q 037042 416 PITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIP-ACFGDLASLRNLSLASNELISVIPS-TFWN 493 (1002)
Q Consensus 416 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~ 493 (1002)
..+++|+.|++++|+++ .+|.. ..+++.|++++|++++... ..+..+++|+.|+|++|++++..+. .+..
T Consensus 378 ----~~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 449 (844)
T 3j0a_A 378 ----HFIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSE 449 (844)
T ss_dssp ----SSCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCS
T ss_pred ----cCCCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCccccccccccccc
Confidence 23889999999999998 55544 4578999999999986532 3456899999999999999876554 4667
Q ss_pred cccCceeeccCCCCC-----CCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccc
Q 037042 494 LKDILYLNLSSNSLT-----GPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMS 568 (1002)
Q Consensus 494 l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 568 (1002)
+++|+.|+|++|.++ +..+..|.++++|+.|+|++|+|++.+|..|.++++|+.|+|++|+|++..|..+. ++
T Consensus 450 ~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~ 527 (844)
T 3j0a_A 450 NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--AN 527 (844)
T ss_dssp CTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SC
T ss_pred CCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--cc
Confidence 899999999999997 44556789999999999999999999999999999999999999999988777776 89
Q ss_pred cceeccccccccCCCcccccCCCccceeeCCCCcCcccCCCC
Q 037042 569 LKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG 610 (1002)
Q Consensus 569 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 610 (1002)
|+.|+|++|+|++.+|..| .+|+.|++++|++.|..+..
T Consensus 528 L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 528 LEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECELS 566 (844)
T ss_dssp CCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSCC
T ss_pred ccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccccH
Confidence 9999999999999988776 47889999999999987753
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=5.8e-56 Score=539.51 Aligned_cols=488 Identities=21% Similarity=0.197 Sum_probs=427.8
Q ss_pred CcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEe
Q 037042 53 HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLN 132 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~ 132 (1002)
.+++.|+|++|.+++..|..|+++++|++|+|++|.+++..|.+|+++++|++|+|++|++++ +|...++++++|++|+
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLAS-LESFPIGQLITLKKLN 134 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCC-SSSSCCTTCTTCCEEE
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCcccc-ccccccCCCCCCCEEe
Confidence 479999999999998889999999999999999999998889999999999999999999984 5544568999999999
Q ss_pred CCCCcccc-cCCccccCCCCCceEEcccccCCCCCccccccccccc----eeeeccccccccccchhhHHhhhchhhccc
Q 037042 133 LSKNMFHG-GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLE----ELYLSFNGLQGAYDHGFLQIFVKNIFVQFS 207 (1002)
Q Consensus 133 Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~ 207 (1002)
|++|.+++ .+|..|+++++|++|+|++|++++..|..|+.+++|+ +|++++|.+++
T Consensus 135 L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~------------------- 195 (606)
T 3vq2_A 135 VAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDF------------------- 195 (606)
T ss_dssp CCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCE-------------------
T ss_pred CCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcce-------------------
Confidence 99999986 6799999999999999999999988888999988876 79999999984
Q ss_pred CCcccCCCCccccCccccceeeccCcccc-cccccccccccccceeecccCCCccc--cC---CccccCCC--ccchhhc
Q 037042 208 HNFSKCEIPNEIGNLRNLEVLALGLNKLV-GVIPAEIFNMSTIQGVGLQNNSLSGS--LQ---SIPYVRLP--NLEELYL 279 (1002)
Q Consensus 208 ~n~~~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~--~~---~~~~~~l~--~L~~L~L 279 (1002)
+|.......+|++|++++|.++ +..|..+.+++.|+.+++..+.+.+. ++ ...+..+. .++.+++
T Consensus 196 -------~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 268 (606)
T 3vq2_A 196 -------IQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRL 268 (606)
T ss_dssp -------ECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEE
T ss_pred -------eCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheec
Confidence 4444444458999999999997 56788899999999999877665421 11 11111121 3556666
Q ss_pred -ccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCC
Q 037042 280 -WGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSS 358 (1002)
Q Consensus 280 -s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~ 358 (1002)
..|.+.+.+|. +..+++|+.|++++|.+..+ | .+..+++|++|++++|+++.+|. + .+++|+.|++++
T Consensus 269 ~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l-~-~l~~~~~L~~L~l~~n~l~~lp~-------~-~l~~L~~L~l~~ 337 (606)
T 3vq2_A 269 TYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYL-E-DVPKHFKWQSLSIIRCQLKQFPT-------L-DLPFLKSLTLTM 337 (606)
T ss_dssp CCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCC-C-CCCTTCCCSEEEEESCCCSSCCC-------C-CCSSCCEEEEES
T ss_pred cccccccccccc-cccCCCCCEEEecCccchhh-h-hccccccCCEEEcccccCccccc-------C-CCCccceeeccC
Confidence 77888888887 89999999999999999854 5 89999999999999999988762 5 889999999999
Q ss_pred CCCCCcccccccccccccccEEecCCCCCCCC--CCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCccc
Q 037042 359 NSIDGILSRKSVGNLSHSLKIFDMSDCNVSGS--IPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLE 436 (1002)
Q Consensus 359 N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 436 (1002)
|+..+.. .+. ..++|+.|++++|++++. +|..+..+++|++|++++|.+++ +|..|..+++|+.|++++|++.
T Consensus 338 n~~~~~~---~~~-~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~ 412 (606)
T 3vq2_A 338 NKGSISF---KKV-ALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLK 412 (606)
T ss_dssp CSSCEEC---CCC-CCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEE
T ss_pred CcCccch---hhc-cCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccC
Confidence 9654332 222 346899999999999876 48889999999999999999985 6689999999999999999999
Q ss_pred ccCC-ccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccc-cCCccccccccCceeeccCCCCCCCCccc
Q 037042 437 GSIP-DEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELIS-VIPSTFWNLKDILYLNLSSNSLTGPLPLE 514 (1002)
Q Consensus 437 ~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 514 (1002)
+..| ..+..+++|+.|++++|++++..|..|..+++|+.|++++|++.+ .+|..|.++++|++|++++|++++..|..
T Consensus 413 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 492 (606)
T 3vq2_A 413 RVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGV 492 (606)
T ss_dssp STTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT
T ss_pred CccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhh
Confidence 8887 689999999999999999999999999999999999999999998 57899999999999999999999999999
Q ss_pred ccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCccccccc-ccceeccccccccCCCc
Q 037042 515 IGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLM-SLKSLNLSNNNLSGSIP 584 (1002)
Q Consensus 515 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p 584 (1002)
|.++++|+.|+|++|++++.+|..|.++++|+.|+|++|+|+ .+|..+..++ +|+.|++++|++.+..+
T Consensus 493 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 493 FDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp TTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred hcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 999999999999999999999999999999999999999999 5777799997 59999999999997544
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-53 Score=533.71 Aligned_cols=486 Identities=22% Similarity=0.219 Sum_probs=414.9
Q ss_pred CcEEEEEeCCCCCcccc-CcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcc-cCCCCCCCCE
Q 037042 53 HRVTALNISHLSLSGTI-PSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTN-ICSNLPFFES 130 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~-~~~~l~~L~~ 130 (1002)
.+++.|||++|.+.+.+ |..++++++|++|+|++|.+++..|..|.++++|++|+|++|.+++.+|.. .+.++++|++
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 47899999999888888 678999999999999999999999999999999999999999999876654 5789999999
Q ss_pred EeCCCCcccccCC-ccccCCCCCceEEcccccCCCCCccccccc--cccceeeeccccccccccchhhHHhhhchhhccc
Q 037042 131 LNLSKNMFHGGIP-SALSNCTYLRILRLSYNDFAGGIPKEIGNL--TKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFS 207 (1002)
Q Consensus 131 L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~ 207 (1002)
|+|++|.+++..| ..|+++++|++|+|++|.+++..|..|..+ ++|+.|+|+.|.+++.
T Consensus 128 L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~------------------ 189 (844)
T 3j0a_A 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSR------------------ 189 (844)
T ss_dssp EEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCC------------------
T ss_pred EECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccc------------------
Confidence 9999999997755 589999999999999999999999999988 8999999999999863
Q ss_pred CCcccCCCCccccCcc------ccceeeccCcccccccccccccc---cccceeecccCCCcc--------ccCCccccC
Q 037042 208 HNFSKCEIPNEIGNLR------NLEVLALGLNKLVGVIPAEIFNM---STIQGVGLQNNSLSG--------SLQSIPYVR 270 (1002)
Q Consensus 208 ~n~~~~~~p~~l~~l~------~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~--------~~~~~~~~~ 270 (1002)
.|..++.+. +|++|++++|++++..|..+... ++++.|.++.+.+.. .+....|..
T Consensus 190 -------~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 190 -------VSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp -------CCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred -------cccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 344444444 49999999999998888877643 568888877443321 112223333
Q ss_pred --CCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCC
Q 037042 271 --LPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNC 348 (1002)
Q Consensus 271 --l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l 348 (1002)
.++|++|+|++|.+.+..|..|..+++|+.|+|++|+|+++.|..|.++++|++|+|++|+++.++. ..|.++
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-----~~~~~l 337 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYS-----SNFYGL 337 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCS-----CSCSSC
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCH-----HHhcCC
Confidence 3789999999999999999999999999999999999999999999999999999999999998754 348899
Q ss_pred CCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEE
Q 037042 349 KYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVL 428 (1002)
Q Consensus 349 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 428 (1002)
++|++|+|++|.|.++.+. .+. -.++|+.|+|++|.+++. ..+++|+.|++++|+++ .+|.. ..+++.|
T Consensus 338 ~~L~~L~L~~N~i~~~~~~-~~~-~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L 406 (844)
T 3j0a_A 338 PKVAYIDLQKNHIAIIQDQ-TFK-FLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI---NLTANLI 406 (844)
T ss_dssp TTCCEEECCSCCCCCCCSS-CSC-SCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---CTTCCEE
T ss_pred CCCCEEECCCCCCCccChh-hhc-CCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---cccccee
Confidence 9999999999999877543 222 246899999999999843 33889999999999998 44543 5679999
Q ss_pred EccCCcccccCC-ccccCCccccEEEccCCcCCccCCc-cccCCccCccccccccccc-----ccCCccccccccCceee
Q 037042 429 YFPDNKLEGSIP-DEVCRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELI-----SVIPSTFWNLKDILYLN 501 (1002)
Q Consensus 429 ~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~ 501 (1002)
++++|++++... ..+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.+. +..+..|.++++|+.|+
T Consensus 407 ~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~ 486 (844)
T 3j0a_A 407 HLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLY 486 (844)
T ss_dssp ECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCC
T ss_pred ecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEE
Confidence 999999996432 3456899999999999999976544 4667899999999999997 44557799999999999
Q ss_pred ccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccC
Q 037042 502 LSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSG 581 (1002)
Q Consensus 502 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 581 (1002)
|++|++++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|..|. +|+.|++++|++.+
T Consensus 487 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np~~C 561 (844)
T 3j0a_A 487 LNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDITHNKFIC 561 (844)
T ss_dssp CCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEEEECCCC
T ss_pred CCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEecCCCccc
Confidence 999999999999999999999999999999998888777 8999999999999999998764 78899999999987
Q ss_pred CCc
Q 037042 582 SIP 584 (1002)
Q Consensus 582 ~~p 584 (1002)
..+
T Consensus 562 ~c~ 564 (844)
T 3j0a_A 562 ECE 564 (844)
T ss_dssp SSS
T ss_pred ccc
Confidence 543
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2e-53 Score=510.77 Aligned_cols=497 Identities=20% Similarity=0.211 Sum_probs=375.3
Q ss_pred CCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCc
Q 037042 40 FCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPT 119 (1002)
Q Consensus 40 ~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~ 119 (1002)
.|.|.|| ||. ++++++ .+|+.+. ++|++|+|++|++++..|..|.++++|++|+|++|++++ ++.
T Consensus 3 ~C~~~~~-c~~----------~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~ 67 (549)
T 2z81_A 3 SCDASGV-CDG----------RSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINT-IEG 67 (549)
T ss_dssp EECTTSE-EEC----------TTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCE-ECT
T ss_pred cCCCCce-EEC----------CCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCc-cCh
Confidence 4999999 975 345666 6777665 789999999999998888899999999999999999985 444
Q ss_pred ccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCC-CCccccccccccceeeeccccccccccchhhHHh
Q 037042 120 NICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAG-GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIF 198 (1002)
Q Consensus 120 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 198 (1002)
..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++ .+|..|+++++|++|+|++|.+.+
T Consensus 68 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~---------- 137 (549)
T 2z81_A 68 DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFS---------- 137 (549)
T ss_dssp TTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC----------
T ss_pred hhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCcccc----------
Confidence 555789999999999999998777789999999999999999986 467789999999999999998443
Q ss_pred hhchhhcccCCcccCCCC-ccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchh
Q 037042 199 VKNIFVQFSHNFSKCEIP-NEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEEL 277 (1002)
Q Consensus 199 ~~~~~~~~~~n~~~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 277 (1002)
.+| ..++++++|++|++++|++++..|..+..+++|+.|++++|.+. .++...+..+++|++|
T Consensus 138 ---------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L 201 (549)
T 2z81_A 138 ---------------EIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYL 201 (549)
T ss_dssp ---------------EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEE
T ss_pred ---------------ccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEE
Confidence 344 57888999999999999999888999999999999999988875 3333334567888888
Q ss_pred hcccccccccc--c-ccccccCCCCeeecCCCccCCCCcc----ccccccccchhccccccCccchhh-hhhhcccCCCC
Q 037042 278 YLWGNHFSGSI--P-NFIFNASKLSRLELQKNSFSGFIPS----TFGNLRNLKRLGLNNNHLTSLTLE-LSFLSSLSNCK 349 (1002)
Q Consensus 278 ~Ls~N~l~~~~--p-~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~l~~~-~~~~~~l~~l~ 349 (1002)
+|++|++++.. | .....+++|+.|++++|.+++..+. .+..+++|+.|++++|.+..++.- ......+..+.
T Consensus 202 ~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~ 281 (549)
T 2z81_A 202 ELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELG 281 (549)
T ss_dssp EEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCT
T ss_pred EccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhc
Confidence 88888887642 1 2223467788888888877765443 335566777777777776654210 00012234555
Q ss_pred CCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccc-cCCCCCCEE
Q 037042 350 YLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITL-GKLQKLQVL 428 (1002)
Q Consensus 350 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L 428 (1002)
+|+.|+++++.+...... ..++..+...++|+.|++++|++. .+|..+ .++++|++|
T Consensus 282 ~L~~L~l~~~~i~~~~~~---------------------~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L 339 (549)
T 2z81_A 282 KVETVTIRRLHIPQFYLF---------------------YDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFL 339 (549)
T ss_dssp TCCEEEEESCBCSCGGGS---------------------CCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEE
T ss_pred ccccccccccccchhhhc---------------------ccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEE
Confidence 666666666554422100 011222334567778888888876 455554 567888888
Q ss_pred EccCCcccccCC---ccccCCccccEEEccCCcCCccCC--ccccCCccCcccccccccccccCCccccccccCceeecc
Q 037042 429 YFPDNKLEGSIP---DEVCRLAKVYQLDLSNNKLSGSIP--ACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLS 503 (1002)
Q Consensus 429 ~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 503 (1002)
+|++|++++.+| ..+..+++|+.|+|++|++++..+ ..+..+++|++|++++|++++ +|..+..+++|++|+++
T Consensus 340 ~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~~L~~L~Ls 418 (549)
T 2z81_A 340 DLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHP-MPDSCQWPEKMRFLNLS 418 (549)
T ss_dssp ECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCC-CCSCCCCCTTCCEEECT
T ss_pred EccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCcc-CChhhcccccccEEECC
Confidence 888888877654 336677888888888888876533 457788888888888888874 57778888888888888
Q ss_pred CCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCC
Q 037042 504 SNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSI 583 (1002)
Q Consensus 504 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 583 (1002)
+|++++ +|..+ .++|+.|++++|+|++.+ .++++|+.|+|++|+|+ .+|. ...+++|+.|+|++|+|++.+
T Consensus 419 ~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~ 489 (549)
T 2z81_A 419 STGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVP 489 (549)
T ss_dssp TSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCC
T ss_pred CCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcC
Confidence 888875 34333 257899999999998753 57889999999999998 5675 567899999999999999988
Q ss_pred cccccCCCccceeeCCCCcCcccCCC
Q 037042 584 PVSLEKLSYLKDLNLSFNKLEGEIPK 609 (1002)
Q Consensus 584 p~~~~~l~~L~~L~Ls~N~l~~~~p~ 609 (1002)
|..+..+++|+.|+|++|+++|.+|.
T Consensus 490 ~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 490 DGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp TTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred HHHHhcCcccCEEEecCCCccCCCcc
Confidence 88899999999999999999998884
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-52 Score=504.16 Aligned_cols=492 Identities=20% Similarity=0.218 Sum_probs=310.7
Q ss_pred cEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeC
Q 037042 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNL 133 (1002)
Q Consensus 54 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L 133 (1002)
+++.|+|++|++++..+.+++++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|...|.++++|++|+|
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEEC
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCC-ccCHhhhcCccccccccc
Confidence 3455555555555444445555555555555555555444444555555555555555554 233333344555555555
Q ss_pred CCCcccccCCccccCCCCCceEEcccccCCC-CCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCccc
Q 037042 134 SKNMFHGGIPSALSNCTYLRILRLSYNDFAG-GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSK 212 (1002)
Q Consensus 134 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~ 212 (1002)
++|++++..+..|+++++|++|+|++|++++ .+|..|+++++|++|++++|++++
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~------------------------ 163 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS------------------------ 163 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCE------------------------
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccce------------------------
Confidence 5555553333345555555555555555543 244555555555555555555443
Q ss_pred CCCCccccCcccc----ceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccccc---
Q 037042 213 CEIPNEIGNLRNL----EVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFS--- 285 (1002)
Q Consensus 213 ~~~p~~l~~l~~L----~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~--- 285 (1002)
..|..++.+++| +.|++++|.+++..|..+... +|+.|++++|......-...+..+++++.+.+..+.+.
T Consensus 164 -~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~ 241 (570)
T 2z63_A 164 -IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEG 241 (570)
T ss_dssp -ECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCS
T ss_pred -ecHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCch
Confidence 122334444444 445555555554444444333 45555555443221110111122223332222211111
Q ss_pred ---ccccccccccC--CCCeeecCCC-ccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCC
Q 037042 286 ---GSIPNFIFNAS--KLSRLELQKN-SFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSN 359 (1002)
Q Consensus 286 ---~~~p~~~~~l~--~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N 359 (1002)
......+..+. .++.+++++| .+.+..|..|.. +++|+.|++++|
T Consensus 242 ~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~-----------------------------l~~L~~L~l~~~ 292 (570)
T 2z63_A 242 NLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNC-----------------------------LTNVSSFSLVSV 292 (570)
T ss_dssp SCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGG-----------------------------GTTCSEEEEESC
T ss_pred hhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcC-----------------------------cCcccEEEecCc
Confidence 00111111111 1233344443 344444444444 445555555555
Q ss_pred CCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccC
Q 037042 360 SIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSI 439 (1002)
Q Consensus 360 ~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 439 (1002)
.+..+.. .+... +|+.|++++|.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++..
T Consensus 293 ~l~~l~~--~~~~~--~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~ 363 (570)
T 2z63_A 293 TIERVKD--FSYNF--GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKG 363 (570)
T ss_dssp EECSCCB--CCSCC--CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEE
T ss_pred cchhhhh--hhccC--CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccc
Confidence 5443321 12222 4556666666665 3343 4677888888888888766655 67888999999999888654
Q ss_pred --CccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCC-ccccccccCceeeccCCCCCCCCccccc
Q 037042 440 --PDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIP-STFWNLKDILYLNLSSNSLTGPLPLEIG 516 (1002)
Q Consensus 440 --p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 516 (1002)
|..+..+++|++|++++|.+++..+. |..+++|+.|++++|.+.+..+ ..|.++++|++|++++|.+++..|..+.
T Consensus 364 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 442 (570)
T 2z63_A 364 CCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 442 (570)
T ss_dssp EEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred cccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhh
Confidence 67788889999999999998865555 8899999999999999988766 5788999999999999999988999999
Q ss_pred ccccceeeeCCCCccC-ccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccce
Q 037042 517 NLKVLVKIDFSMNNFS-GVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKD 595 (1002)
Q Consensus 517 ~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 595 (1002)
++++|+.|++++|.++ +.+|..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..|.++++|+.
T Consensus 443 ~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 522 (570)
T 2z63_A 443 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQK 522 (570)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred cCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcE
Confidence 9999999999999998 678999999999999999999999988999999999999999999999988888999999999
Q ss_pred eeCCCCcCcccCCCCC
Q 037042 596 LNLSFNKLEGEIPKGG 611 (1002)
Q Consensus 596 L~Ls~N~l~~~~p~~~ 611 (1002)
|++++|+++|.+|...
T Consensus 523 L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 523 IWLHTNPWDCSCPRID 538 (570)
T ss_dssp EECCSSCBCCCTTTTH
T ss_pred EEecCCcccCCCcchH
Confidence 9999999999998754
No 15
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.7e-53 Score=459.39 Aligned_cols=259 Identities=31% Similarity=0.501 Sum_probs=216.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
++|...+.||+|+||+||+|++. +++.||||+++.......+.|.+|+++|++++|||||+++++|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD---- 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC----
Confidence 46788899999999999999863 47889999998776666788999999999999999999999998776
Q ss_pred HHHHhhccCCCCChhHhhhccC------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC
Q 037042 780 FKALALEYMPHGSLEKYLYSSN------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM 847 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~ 847 (1002)
..++|||||++|+|.++++..+ ..+++.++..|+.|||+||+||| +++||||||||+|||+++++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCC
Confidence 5689999999999999997642 36899999999999999999999 89999999999999999999
Q ss_pred cEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHH
Q 037042 848 VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWV 926 (1002)
Q Consensus 848 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~ 926 (1002)
.+||+|||+|+.....+.........||+.|||||++.++.|+.++|||||||++|||+| |+.||...... +.+
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-----~~~ 240 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-----EVI 240 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHH
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHH
Confidence 999999999997766554444445679999999999999999999999999999999999 89999764221 111
Q ss_pred HHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 927 NDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 927 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
. .+..+.... .+..++..+.++|.+||+.||++|||++||++.|+++...
T Consensus 241 ~--------~i~~~~~~~-------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 241 E--------CITQGRVLQ-------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp H--------HHHHTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred H--------HHHcCCCCC-------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 1 111111111 1234567899999999999999999999999999998764
No 16
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.8e-52 Score=461.21 Aligned_cols=259 Identities=29% Similarity=0.484 Sum_probs=207.7
Q ss_pred cCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
++|...++||+|+||+||+|++. +++.||||+++.......+.|.+|+++|++++|||||+++++|.+.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR---- 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----
Confidence 45677789999999999999864 47889999998776667788999999999999999999999998776
Q ss_pred HHHHhhccCCCCChhHhhhccC--------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC
Q 037042 780 FKALALEYMPHGSLEKYLYSSN--------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD 845 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~--------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~ 845 (1002)
..++|||||++|+|.++++..+ ..+++.+++.|+.|||+||+||| +++||||||||+|||+++
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEET
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECC
Confidence 5689999999999999997642 35899999999999999999999 899999999999999999
Q ss_pred CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHH
Q 037042 846 NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKH 924 (1002)
Q Consensus 846 ~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~ 924 (1002)
++.+||+|||+|+.....+.....+...||+.|||||++.+..|+.++|||||||++|||+| |+.||...... +
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-----~ 268 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-----E 268 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-----H
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-----H
Confidence 99999999999997765554444456789999999999999999999999999999999999 89999764221 1
Q ss_pred HHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 925 WVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 925 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
.+. .+..+... ..+..+++.+.++|.+||+.||++|||++||+++|+.+...
T Consensus 269 ~~~--------~i~~g~~~-------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 269 AID--------CITQGREL-------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHH--------HHHHTCCC-------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHH--------HHHcCCCC-------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 111 11111111 11234567899999999999999999999999999999764
No 17
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.6e-51 Score=490.44 Aligned_cols=467 Identities=20% Similarity=0.200 Sum_probs=359.3
Q ss_pred CcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEe
Q 037042 53 HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLN 132 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~ 132 (1002)
.+++.|+|++|++++..|..++++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|...++++++|++|+
T Consensus 52 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 130 (570)
T 2z63_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELN 130 (570)
T ss_dssp SSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCC-CSTTCSCTTCTTCCEEE
T ss_pred CCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccc-cCCCccccccccccEEe
Confidence 46999999999999887889999999999999999999888899999999999999999998 56665578999999999
Q ss_pred CCCCcccc-cCCccccCCCCCceEEcccccCCCCCcccccccccc----ceeeeccccccccccchhhHHhhhchhhccc
Q 037042 133 LSKNMFHG-GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKL----EELYLSFNGLQGAYDHGFLQIFVKNIFVQFS 207 (1002)
Q Consensus 133 Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L----~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~ 207 (1002)
|++|.+++ .+|..|+++++|++|++++|++++..|..|+.+++| +.|++++|.+++.
T Consensus 131 L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~------------------ 192 (570)
T 2z63_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFI------------------ 192 (570)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEE------------------
T ss_pred cCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceec------------------
Confidence 99999997 579999999999999999999998888899999999 8999999999853
Q ss_pred CCcccCCCCccccCccccceeeccCccccc-ccccccccccccceeecccCCCcc-----ccCCccccCCC--ccchhhc
Q 037042 208 HNFSKCEIPNEIGNLRNLEVLALGLNKLVG-VIPAEIFNMSTIQGVGLQNNSLSG-----SLQSIPYVRLP--NLEELYL 279 (1002)
Q Consensus 208 ~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~-----~~~~~~~~~l~--~L~~L~L 279 (1002)
.|..+..+ +|+.|++++|.... .+|..+.+++.++.+.+..+.+.. .++...+..++ .++.+++
T Consensus 193 -------~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 264 (570)
T 2z63_A 193 -------QPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 264 (570)
T ss_dssp -------CTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEE
T ss_pred -------CHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhh
Confidence 33444444 89999999986542 356667777777766655433321 12222222332 3567788
Q ss_pred ccc-cccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCC
Q 037042 280 WGN-HFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSS 358 (1002)
Q Consensus 280 s~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~ 358 (1002)
++| .+.+.+|..+..+++|++|++++|.++ .+|..+..+ +|++|++++|.++.+|. ..+++|+.|++++
T Consensus 265 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~--------~~l~~L~~L~l~~ 334 (570)
T 2z63_A 265 AYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQFPT--------LKLKSLKRLTFTS 334 (570)
T ss_dssp EETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSCCB--------CBCSSCCEEEEES
T ss_pred hcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccccCc--------ccccccCEEeCcC
Confidence 888 788889999999999999999999998 477888888 99999999999987763 3566777777777
Q ss_pred CCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccC--CccccCCCCCCEEEccCCccc
Q 037042 359 NSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSI--PITLGKLQKLQVLYFPDNKLE 436 (1002)
Q Consensus 359 N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~ 436 (1002)
|.+.+.. +. ..+++|++|++++|++++.. |..+..+++|++|++++|.+.
T Consensus 335 n~~~~~~--------------------------~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~ 386 (570)
T 2z63_A 335 NKGGNAF--------------------------SE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI 386 (570)
T ss_dssp CBSCCBC--------------------------CC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEE
T ss_pred Ccccccc--------------------------cc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccc
Confidence 7665432 22 45566666666666666443 556666677777777777766
Q ss_pred ccCCccccCCccccEEEccCCcCCccCC-ccccCCccCcccccccccccccCCccccccccCceeeccCCCCC-CCCccc
Q 037042 437 GSIPDEVCRLAKVYQLDLSNNKLSGSIP-ACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLT-GPLPLE 514 (1002)
Q Consensus 437 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~ 514 (1002)
+..+. +..+++|+.|++++|.+.+..| ..|..+++|++|++++|.+.+..|..|.++++|++|++++|.++ +.+|..
T Consensus 387 ~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~ 465 (570)
T 2z63_A 387 TMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 465 (570)
T ss_dssp EEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSC
T ss_pred ccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhh
Confidence 44333 6667777777777777766554 45667777777777777777777777777777777777777776 456777
Q ss_pred ccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcc
Q 037042 515 IGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPV 585 (1002)
Q Consensus 515 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 585 (1002)
+..+++|+.|++++|++++..|..|..+++|+.|+|++|++++.+|..|..+++|+.|++++|++++..|.
T Consensus 466 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 466 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred hhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 77777788888888888777777788888888888888888877777777888888888888888776553
No 18
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.2e-52 Score=451.51 Aligned_cols=263 Identities=24% Similarity=0.377 Sum_probs=206.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++++..++||+|+||+||+|++++ .||||+++.. .....+.|.+|++++++++|||||++++++..+. .+
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~-----~~ 107 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN-----LA 107 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS-----CE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCe-----EE
Confidence 3567888999999999999998753 6999998743 2345678999999999999999999999986543 47
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+|||||++|+|.++++..+..+++.++..|+.|||+||+||| +++||||||||+|||+++++.+||+|||+|+....
T Consensus 108 iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 999999999999999887777999999999999999999999 89999999999999999999999999999987655
Q ss_pred CCceeeeccCCCCcccccccccCC---CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSE---GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
..........+||+.|||||++.+ +.|+.++|||||||++|||+||+.||........ +...... ....
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-----~~~~~~~---~~~~ 256 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-----IIFMVGR---GYAS 256 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-----HHHHHHT---TCCC
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-----HHHHHhc---CCCC
Confidence 443334456789999999998753 4689999999999999999999999976422111 1100000 0111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
+... ..+..++..+.++|.+||+.+|++|||+.||+++|+.++...
T Consensus 257 p~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 257 PDLS-------KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp CCST-------TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred CCcc-------cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 1110 012345678999999999999999999999999999987543
No 19
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2e-52 Score=456.51 Aligned_cols=257 Identities=26% Similarity=0.443 Sum_probs=212.4
Q ss_pred CCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
+++..++||+|+||+||+|++. +++.||||+++... ....+.|.+|+.++++++|||||+++|+|...+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~---- 102 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ---- 102 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC----
Confidence 4566789999999999999863 46889999997543 334678999999999999999999999998766
Q ss_pred HHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC
Q 037042 780 FKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG 844 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~ 844 (1002)
..++|||||++|+|.+++.... ..+++..+..|+.|||+||+||| +++||||||||+|||++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVY 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEEC
Confidence 5679999999999999996532 35899999999999999999999 89999999999999999
Q ss_pred CCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHH
Q 037042 845 DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLK 923 (1002)
Q Consensus 845 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~ 923 (1002)
+++.+||+|||+|+.....+.....+...||+.|||||++.++.|+.++|||||||++|||+| |+.||......
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~----- 254 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ----- 254 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-----
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH-----
Confidence 999999999999987765544444456789999999999999999999999999999999999 89999764221
Q ss_pred HHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 924 HWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 924 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
+.+. .+.++... ..++.++..+.++|.+||+.||++|||++||+++|+++.+
T Consensus 255 ~~~~--------~i~~~~~~-------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n 306 (308)
T 4gt4_A 255 DVVE--------MIRNRQVL-------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306 (308)
T ss_dssp HHHH--------HHHTTCCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred HHHH--------HHHcCCCC-------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence 1111 11111111 1133567789999999999999999999999999998754
No 20
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.2e-49 Score=483.17 Aligned_cols=512 Identities=20% Similarity=0.168 Sum_probs=315.8
Q ss_pred EEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCC
Q 037042 55 VTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLS 134 (1002)
Q Consensus 55 v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls 134 (1002)
++.|||++|+|++..|.+|.++++|++|+|++|+|++..|.+|.+|++|++|+|++|+|+ .+|...|.++++|++|+|+
T Consensus 54 ~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 54 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECGGGGTTCTTCCEEECT
T ss_pred CCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC-CCCHHHhcCCCCCCEEECC
Confidence 455555555555444444555555555555555555444444555555555555555554 3444444555555555555
Q ss_pred CCcccccCCccccCCCCCceEEcccccCCC-CCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccC
Q 037042 135 KNMFHGGIPSALSNCTYLRILRLSYNDFAG-GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKC 213 (1002)
Q Consensus 135 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~ 213 (1002)
+|++++..+..|+++++|++|+|++|++++ .+|..++++++|++|+|++|++++..
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~----------------------- 189 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY----------------------- 189 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC-----------------------
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccc-----------------------
Confidence 555554444445555555555555555543 23444555555555555555554321
Q ss_pred CCCccccCcccc----ceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccc------
Q 037042 214 EIPNEIGNLRNL----EVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNH------ 283 (1002)
Q Consensus 214 ~~p~~l~~l~~L----~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~------ 283 (1002)
|..+..+.++ ..++++.|.++.+.+.. .....++.+++.+|.....+....+..+..++...+..+.
T Consensus 190 --~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~-~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~ 266 (635)
T 4g8a_A 190 --CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGA-FKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN 266 (635)
T ss_dssp --GGGGHHHHTCTTCCCEEECTTCCCCEECTTT-TTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCC
T ss_pred --cccccchhhhhhhhhhhhcccCcccccCccc-ccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccc
Confidence 2222222222 13344444444322222 2222334444444433322222222233333333332221
Q ss_pred ccccccccccccCCCCeeecCCCccCC---CCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCC
Q 037042 284 FSGSIPNFIFNASKLSRLELQKNSFSG---FIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNS 360 (1002)
Q Consensus 284 l~~~~p~~~~~l~~L~~L~L~~N~l~~---~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~ 360 (1002)
+.......+.....+..+++..+.... ..+..+..+.+++.+++.+|.+..++. +.....|+.|++++|.
T Consensus 267 l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~-------~~~~~~L~~L~l~~~~ 339 (635)
T 4g8a_A 267 LEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKD-------FSYNFGWQHLELVNCK 339 (635)
T ss_dssp CSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGG-------GGSCCCCSEEEEESCE
T ss_pred cccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccc-------cccchhhhhhhccccc
Confidence 111222233334444444444333322 123345566677777777777766542 4556678888888887
Q ss_pred CCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccC--ccCCccccCCCCCCEEEccCCccccc
Q 037042 361 IDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLN--GSIPITLGKLQKLQVLYFPDNKLEGS 438 (1002)
Q Consensus 361 l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~ 438 (1002)
+..+... ....|+.+++++|.+... ..+..+++|+.|++++|.+. +..+..+..+.+|+.|++..|.+..
T Consensus 340 ~~~~~~~-----~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~- 411 (635)
T 4g8a_A 340 FGQFPTL-----KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT- 411 (635)
T ss_dssp ESSCCCC-----BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-
T ss_pred ccCcCcc-----cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-
Confidence 7665332 234677888888876543 34557788888888888875 3456667778888888888888774
Q ss_pred CCccccCCccccEEEccCCcCCccCC-ccccCCccCcccccccccccccCCccccccccCceeeccCCCC-CCCCccccc
Q 037042 439 IPDEVCRLAKVYQLDLSNNKLSGSIP-ACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSL-TGPLPLEIG 516 (1002)
Q Consensus 439 ~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~~~~~~ 516 (1002)
.+..+..+++|+.++++.|++....+ ..|..+++++.++++.|.+.+..+..+..+++|+.|++++|++ .+..|..|.
T Consensus 412 ~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~ 491 (635)
T 4g8a_A 412 MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT 491 (635)
T ss_dssp ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT
T ss_pred ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhh
Confidence 45567788888888888877765544 4678888888888888888888888888888888888888874 445677888
Q ss_pred ccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCC-Cccce
Q 037042 517 NLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKL-SYLKD 595 (1002)
Q Consensus 517 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~ 595 (1002)
.+++|+.|+|++|+|++++|.+|+++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+ ++|++
T Consensus 492 ~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~ 571 (635)
T 4g8a_A 492 ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAF 571 (635)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCE
T ss_pred hccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCE
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888887 57888
Q ss_pred eeCCCCcCcccCC
Q 037042 596 LNLSFNKLEGEIP 608 (1002)
Q Consensus 596 L~Ls~N~l~~~~p 608 (1002)
|+|++|+|++...
T Consensus 572 L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 572 LNLTQNDFACTCE 584 (635)
T ss_dssp EECTTCCBCCSGG
T ss_pred EEeeCCCCcccCC
Confidence 8888888887654
No 21
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=5.6e-51 Score=447.88 Aligned_cols=252 Identities=22% Similarity=0.275 Sum_probs=210.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
+.|+..++||+|+||+||+|+.. +|+.||||+++.......+.+.+|+++|++++|||||++++++...+ ..|+|
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~----~~~iv 149 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD----ELWVV 149 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETT----EEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----EEEEE
Confidence 45888999999999999999865 79999999998665555677889999999999999999999998877 56899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||||+||+|.+++... .+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.+....
T Consensus 150 mEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 150 MEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp ECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred EeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence 9999999999999764 4899999999999999999999 8999999999999999999999999999998775443
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +... .+.+.....
T Consensus 225 ~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-----~~~~--------~i~~~~~~~ 289 (346)
T 4fih_A 225 P--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-----KAMK--------MIRDNLPPR 289 (346)
T ss_dssp C--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHH--------HHHHSSCCC
T ss_pred C--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----HHHH--------HHHcCCCCC
Confidence 2 234568999999999999999999999999999999999999999753211 1111 111111000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.. .+..++..+.+++.+||+.||++|||++|+++|=+
T Consensus 290 ~~-----~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~ 326 (346)
T 4fih_A 290 LK-----NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 326 (346)
T ss_dssp CS-----CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGG
T ss_pred CC-----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHh
Confidence 00 11234567899999999999999999999999855
No 22
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.9e-50 Score=477.11 Aligned_cols=458 Identities=21% Similarity=0.232 Sum_probs=364.0
Q ss_pred EEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCC
Q 037042 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSK 135 (1002)
Q Consensus 56 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~ 135 (1002)
+.||+++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|.. |.++++|++|+|++
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISV-FKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGG-GTTCTTCCEEECCS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHH-hhcccCCCEEecCC
Confidence 47999999999 6888877 89999999999999888889999999999999999999655554 57899999999999
Q ss_pred CcccccCCccccCCCCCceEEcccccCCC-CCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCC
Q 037042 136 NMFHGGIPSALSNCTYLRILRLSYNDFAG-GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCE 214 (1002)
Q Consensus 136 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 214 (1002)
|+|+ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~-------------------------- 129 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK-------------------------- 129 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG--------------------------
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch--------------------------
Confidence 9999 57766 89999999999999987 578999999999999999999874
Q ss_pred CCccccCcccc--ceeeccCccc--cccccccccccc-ccceeecccCCCccccCCccccCCCccchhhccccc------
Q 037042 215 IPNEIGNLRNL--EVLALGLNKL--VGVIPAEIFNMS-TIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNH------ 283 (1002)
Q Consensus 215 ~p~~l~~l~~L--~~L~L~~N~l--~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~------ 283 (1002)
..++.+++| ++|++++|++ .+..|..+..+. +...+++++|++.+.++...+..+++|+.|++++|.
T Consensus 130 --~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 207 (520)
T 2z7x_B 130 --SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCS 207 (520)
T ss_dssp --GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTH
T ss_pred --hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccc
Confidence 234556666 9999999999 888888888766 455678888888777777777777888888888776
Q ss_pred -ccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCC
Q 037042 284 -FSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSID 362 (1002)
Q Consensus 284 -l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 362 (1002)
+.+.+| .+..+++|+.|++++|.+++..+..+ ... ..++
T Consensus 208 ~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~-------------------~~~-------~~~~------------- 247 (520)
T 2z7x_B 208 YFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRI-------------------LQL-------VWHT------------- 247 (520)
T ss_dssp HHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHH-------------------HHH-------HHTS-------------
T ss_pred eeecchh-hhccccchhhccccccccCHHHHHHH-------------------HHH-------hhhC-------------
Confidence 554444 45555566666655555543211110 000 0012
Q ss_pred CcccccccccccccccEEecCCCCCCCCCCccc-----CCCCCccEEEccCCccCccCC-ccccCC---CCCCEEEccCC
Q 037042 363 GILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI-----GNLTNLIGFYLGGNNLNGSIP-ITLGKL---QKLQVLYFPDN 433 (1002)
Q Consensus 363 ~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~L~~N 433 (1002)
+|+.|++++|++++.+|..+ +.+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|
T Consensus 248 -------------~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n 312 (520)
T 2z7x_B 248 -------------TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGT 312 (520)
T ss_dssp -------------SCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESS
T ss_pred -------------cccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCC
Confidence 34445555555555566666 7788888888888888 344 455544 67889999998
Q ss_pred cccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccc--cCCccccccccCceeeccCCCCCCCC
Q 037042 434 KLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELIS--VIPSTFWNLKDILYLNLSSNSLTGPL 511 (1002)
Q Consensus 434 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~ 511 (1002)
.+.+.. .+..+++|++|++++|++++..|..++.+++|++|++++|++.+ .+|..|.++++|++|++++|++++.+
T Consensus 313 ~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l 390 (520)
T 2z7x_B 313 RMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDE 390 (520)
T ss_dssp CCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCG
T ss_pred cccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccc
Confidence 876432 12578889999999999998888889999999999999999987 45577899999999999999999855
Q ss_pred cc-cccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCccc-ccC
Q 037042 512 PL-EIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVS-LEK 589 (1002)
Q Consensus 512 ~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~ 589 (1002)
|. .+..+++|+.|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++ +|.. +..
T Consensus 391 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~ 466 (520)
T 2z7x_B 391 KKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDR 466 (520)
T ss_dssp GGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTT
T ss_pred ccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhcc
Confidence 54 488899999999999999988887765 79999999999999 788888899999999999999995 5554 899
Q ss_pred CCccceeeCCCCcCcccCCC
Q 037042 590 LSYLKDLNLSFNKLEGEIPK 609 (1002)
Q Consensus 590 l~~L~~L~Ls~N~l~~~~p~ 609 (1002)
+++|++|+|++|+++|..+.
T Consensus 467 l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 467 LTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp CTTCCEEECCSSCBCCCHHH
T ss_pred CCcccEEECcCCCCcccCCc
Confidence 99999999999999987764
No 23
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7.3e-50 Score=479.89 Aligned_cols=481 Identities=20% Similarity=0.233 Sum_probs=377.2
Q ss_pred CcccccEeeC--CCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccC
Q 037042 41 CNWTGVTCDV--HSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIP 118 (1002)
Q Consensus 41 c~w~gv~c~~--~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip 118 (1002)
|++.+++.-. ...+++.|+|++|++++..|..++++++|++|+|++|++++..|..|+++++|++|+|++|++++ +|
T Consensus 12 ~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~ 90 (549)
T 2z81_A 12 GRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSS-LS 90 (549)
T ss_dssp CTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCS-CC
T ss_pred CCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCc-cC
Confidence 5666665432 23579999999999998889999999999999999999998888999999999999999999995 55
Q ss_pred cccCCCCCCCCEEeCCCCcccc-cCCccccCCCCCceEEcccccCCCCCc-cccccccccceeeeccccccccccchhhH
Q 037042 119 TNICSNLPFFESLNLSKNMFHG-GIPSALSNCTYLRILRLSYNDFAGGIP-KEIGNLTKLEELYLSFNGLQGAYDHGFLQ 196 (1002)
Q Consensus 119 ~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 196 (1002)
...++++++|++|+|++|++++ .+|..++++++|++|+|++|++.+.+| ..|.++++|++|++++|++++
T Consensus 91 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~-------- 162 (549)
T 2z81_A 91 SSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN-------- 162 (549)
T ss_dssp HHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE--------
T ss_pred HHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc--------
Confidence 5555889999999999999997 467889999999999999999555665 689999999999999999986
Q ss_pred HhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCcccc--CCccccCCCcc
Q 037042 197 IFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSL--QSIPYVRLPNL 274 (1002)
Q Consensus 197 ~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~~l~~L 274 (1002)
.+|..++.+++|++|+++.|.+....+..+..+++|++|++++|++++.. +......+++|
T Consensus 163 -----------------~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L 225 (549)
T 2z81_A 163 -----------------YQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPM 225 (549)
T ss_dssp -----------------ECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCC
T ss_pred -----------------cChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcc
Confidence 46888999999999999999997543333456899999999999998632 11223457899
Q ss_pred chhhcccccccccccc----cccccCCCCeeecCCCccCCCC------ccccccccccchhccccccCccchhhhhhhcc
Q 037042 275 EELYLWGNHFSGSIPN----FIFNASKLSRLELQKNSFSGFI------PSTFGNLRNLKRLGLNNNHLTSLTLELSFLSS 344 (1002)
Q Consensus 275 ~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~------p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~ 344 (1002)
+.|++++|++++..+. .+..+++|+.|++++|.+.+.. ...+..+.+|+.|++.++.+.....
T Consensus 226 ~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~------- 298 (549)
T 2z81_A 226 KKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYL------- 298 (549)
T ss_dssp CEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGG-------
T ss_pred cceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhh-------
Confidence 9999999999875543 4456789999999999988642 2345778899999999998876431
Q ss_pred cCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCccc-CCCCCccEEEccCCccCccCC---cccc
Q 037042 345 LSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI-GNLTNLIGFYLGGNNLNGSIP---ITLG 420 (1002)
Q Consensus 345 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p---~~~~ 420 (1002)
+..++ .......+|+.|++++|++. .+|..+ ..+++|++|+|++|++++.+| ..++
T Consensus 299 ~~~l~-------------------~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 358 (549)
T 2z81_A 299 FYDLS-------------------TVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKG 358 (549)
T ss_dssp SCCCC-------------------HHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTT
T ss_pred cccch-------------------hhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhh
Confidence 11110 00111234555555555554 445444 467788888888888876653 3467
Q ss_pred CCCCCCEEEccCCcccccCC--ccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCc
Q 037042 421 KLQKLQVLYFPDNKLEGSIP--DEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDIL 498 (1002)
Q Consensus 421 ~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 498 (1002)
.+++|++|+|++|++++..+ ..+..+++|++|+|++|+++ .+|..+..+++|++|++++|+++++.. .+ .++|+
T Consensus 359 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~-~~--~~~L~ 434 (549)
T 2z81_A 359 AWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKT-CI--PQTLE 434 (549)
T ss_dssp SSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCT-TS--CTTCS
T ss_pred ccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccc-hh--cCCce
Confidence 77888888888888875432 45777888888888888887 567777788888888888888775432 22 25788
Q ss_pred eeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceecccccc
Q 037042 499 YLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNN 578 (1002)
Q Consensus 499 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 578 (1002)
+|++++|++++.+ ..+++|++|+|++|+|+ .+|. ...+++|+.|+|++|++++.+|..|..+++|+.|+|++|+
T Consensus 435 ~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 508 (549)
T 2z81_A 435 VLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNP 508 (549)
T ss_dssp EEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSC
T ss_pred EEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCC
Confidence 9999999988643 57888999999999998 4555 4678999999999999998888889999999999999999
Q ss_pred ccCCCc
Q 037042 579 LSGSIP 584 (1002)
Q Consensus 579 l~~~~p 584 (1002)
+++..|
T Consensus 509 ~~~~~~ 514 (549)
T 2z81_A 509 WDCSCP 514 (549)
T ss_dssp BCCCHH
T ss_pred ccCCCc
Confidence 987766
No 24
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=5.4e-51 Score=448.73 Aligned_cols=252 Identities=20% Similarity=0.292 Sum_probs=203.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|++.+.||+|+||+||+|+. .+|+.||||++++.. ....+.+.+|++++++++|||||++++++.+.+ ..
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~----~~ 98 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENG----SL 98 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----EE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC----EE
Confidence 46899999999999999999985 479999999997542 334678899999999999999999999998776 56
Q ss_pred HHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
|+|||||+||+|.+++...+. .+++..++.|+.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.+
T Consensus 99 yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 175 (350)
T 4b9d_A 99 YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175 (350)
T ss_dssp EEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCC
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceee
Confidence 899999999999999976543 5789999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .+.+. ++...
T Consensus 176 ~~~~~--~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----~~~~~--------~i~~~ 240 (350)
T 4b9d_A 176 NSTVE--LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-----KNLVL--------KIISG 240 (350)
T ss_dssp CHHHH--HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHH--------HHHHT
T ss_pred cCCcc--cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHHH--------HHHcC
Confidence 54321 12345799999999999999999999999999999999999999976321 11111 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.... .+..++..+.+++.+||+.||++|||++|+++|=
T Consensus 241 ~~~~-------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp 278 (350)
T 4b9d_A 241 SFPP-------VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKG 278 (350)
T ss_dssp CCCC-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred CCCC-------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence 1110 0122456789999999999999999999999873
No 25
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=8.5e-51 Score=439.68 Aligned_cols=250 Identities=24% Similarity=0.339 Sum_probs=209.2
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|++.+.||+|+||+||+|+. .+|+.||||++.+.. ....+.+.+|++++++++|||||++++++.+.+ ..
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~----~~ 107 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE----KL 107 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----EE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC----EE
Confidence 5699999999999999999985 479999999997542 334578899999999999999999999998877 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
|+|||||+||+|.+++.+.+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 108 yivmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 108 YFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp EEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 89999999999999998765 4999999999999999999999 8999999999999999999999999999999876
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
...........+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .+... ++....
T Consensus 184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~--------~i~~~~ 250 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-----GLIFA--------KIIKLE 250 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH--------HHHHTC
T ss_pred CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHH--------HHHcCC
Confidence 54443344567899999999999999999999999999999999999999975321 11111 111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
... ++..+..+.+++.+||++||++|||++|++.+
T Consensus 251 ~~~--------p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 251 YDF--------PEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp CCC--------CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred CCC--------CcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 111 11234568899999999999999999986443
No 26
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.6e-50 Score=441.35 Aligned_cols=253 Identities=22% Similarity=0.261 Sum_probs=205.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
+.|+..++||+|+||+||+|+.. +|+.||||+++.... ..+|+.++++++|||||++++++.+++ ..++|
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~----~~~iv 128 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGP----WVNIF 128 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETT----EEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECC----EEEEE
Confidence 45778889999999999999864 699999999986532 246999999999999999999998776 56899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC-cEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-VAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~~~~ 863 (1002)
||||+||+|.++++..+ .+++..+..++.||+.||+||| +++||||||||+|||++.+| .+||+|||+|+.+...
T Consensus 129 mEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp ECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred EeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 99999999999998765 4999999999999999999999 99999999999999999987 6999999999987643
Q ss_pred Cce---eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 864 DQF---VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 864 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
... .+....+||+.|||||++.+..|+.++||||+||++|||+||+.||........ ... +...
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~------------i~~~ 271 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLK------------IASE 271 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHH------------HHHS
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHH------------HHcC
Confidence 321 122345799999999999999999999999999999999999999976433322 111 1111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
.... ...++.++..+.+++.+||++||++|||+.|++++|.++-
T Consensus 272 ~~~~-----~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 272 PPPI-----REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp CCGG-----GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCc-----hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 1000 0112345677899999999999999999999999987654
No 27
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1e-50 Score=444.47 Aligned_cols=274 Identities=20% Similarity=0.251 Sum_probs=205.0
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
.+|...++||+|+||+||+|++. |+.||||+++.... .....++|+..+.+++|||||+++++|...+......++||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 35777899999999999999884 89999999975432 22334456666778899999999999987543222457999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcC-----CCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG-----YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
|||++|+|.++++.. .+++..+.+++.|+|+||+|||.. +.++||||||||+|||++.++++||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999999765 489999999999999999999942 1349999999999999999999999999999877
Q ss_pred cCCCcee--eeccCCCCcccccccccCCC------CcCcccchHHHHHHHHHHHhCCCCCcccccccc----------cH
Q 037042 861 TREDQFV--TQTQTPATIGYMALEYGSEG------RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM----------TL 922 (1002)
Q Consensus 861 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~----------~~ 922 (1002)
....... .....+||+.|||||++.+. .|+.++|||||||++|||+||++||........ ..
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 6544322 12345799999999988654 478899999999999999999888754322111 11
Q ss_pred HHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 923 KHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 923 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
..+.... ..+..++... ......+++..+.++|.+||+.||++||||.||+++|+++.+..
T Consensus 239 ~~~~~~~----~~~~~rp~~p-----~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 239 EEMRKVV----CEQKLRPNIP-----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHH----TTSCCCCCCC-----GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHH----hcccCCCCCC-----ccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 1111100 0111111111 11223456778999999999999999999999999999987653
No 28
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=8.5e-50 Score=430.28 Aligned_cols=251 Identities=23% Similarity=0.325 Sum_probs=198.8
Q ss_pred CCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 709 SENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 709 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
+..++||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++|||||++++++..........++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55678999999999999865 68999999997542 3345778999999999999999999999865322222457999
Q ss_pred ccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCC--cEEccCCCCCeeeC-CCCcEEEecccccccccC
Q 037042 786 EYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP--VIHCDLKPSNVLLG-DNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiHrDlkp~NILl~-~~~~~kl~DfGla~~~~~ 862 (1002)
|||++|+|.+++.+.+ .+++..+..++.||+.||+||| +++ ||||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999998765 4899999999999999999999 776 99999999999998 479999999999986443
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. ....+||+.|||||++.+ +|+.++|||||||++|||+||+.||...... ..... .+..+..
T Consensus 185 ~~----~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~----~~~~~--------~i~~~~~ 247 (290)
T 3fpq_A 185 SF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA----AQIYR--------RVTSGVK 247 (290)
T ss_dssp TS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH----HHHHH--------HHTTTCC
T ss_pred Cc----cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH----HHHHH--------HHHcCCC
Confidence 22 234689999999998764 6999999999999999999999999653221 11111 1111111
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.. ..+..+++++.+++.+||+.||++|||++|+++|-+
T Consensus 248 ~~------~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~ 285 (290)
T 3fpq_A 248 PA------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 285 (290)
T ss_dssp CG------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred CC------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence 10 011223456889999999999999999999998743
No 29
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.9e-49 Score=477.55 Aligned_cols=381 Identities=16% Similarity=0.215 Sum_probs=260.2
Q ss_pred CcccccccccccccccccceeecccCCCccc-cCCccccCCCccchhhccccccccccccccc--ccCCCCeeecCCCcc
Q 037042 232 LNKLVGVIPAEIFNMSTIQGVGLQNNSLSGS-LQSIPYVRLPNLEELYLWGNHFSGSIPNFIF--NASKLSRLELQKNSF 308 (1002)
Q Consensus 232 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l 308 (1002)
.|++++ +|..++++++|++|+|++|++++. +... + ..-+.+...+.+|..++ ++++|++|+|++|++
T Consensus 192 ~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~-~--------~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 192 SNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEA-W--------ENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSS-C--------SCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred cCCCcc-CCHHHhcccCCCEEECcCCcccccccccc-c--------cccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 577887 777788888888888887777762 0000 0 00011111222444444 444555555555554
Q ss_pred CCCCccccccccccchhcccccc-Ccc--chhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCC
Q 037042 309 SGFIPSTFGNLRNLKRLGLNNNH-LTS--LTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDC 385 (1002)
Q Consensus 309 ~~~~p~~~~~l~~L~~L~L~~N~-l~~--l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N 385 (1002)
.+.+|..|+++++|++|+|++|+ ++. +|..+..+..+..+++|++|+|++|+++.++....+..+ ++|+.|++++|
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l-~~L~~L~L~~N 340 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKM-KKLGMLECLYN 340 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTC-TTCCEEECCSC
T ss_pred CccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccC-CCCCEEeCcCC
Confidence 44444445555555555555554 442 443332222223335555555555555533210122222 35666666666
Q ss_pred CCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCC-CCEEEccCCcccccCCccccCCc--cccEEEccCCcCCcc
Q 037042 386 NVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQK-LQVLYFPDNKLEGSIPDEVCRLA--KVYQLDLSNNKLSGS 462 (1002)
Q Consensus 386 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~ 462 (1002)
+++|.+| .|+.+++|++|+|++|+++ .+|..+.++++ |++|++++|+++ .+|..+..+. +|+.|+|++|++++.
T Consensus 341 ~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~ 417 (636)
T 4eco_A 341 QLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSV 417 (636)
T ss_dssp CCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred cCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCc
Confidence 6666677 7777888888888888888 67777888888 888888888888 6777776654 788888888888888
Q ss_pred CCcccc-------CCccCcccccccccccccCCccccccccCceeeccCCCCCCCCccccccc-------ccceeeeCCC
Q 037042 463 IPACFG-------DLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNL-------KVLVKIDFSM 528 (1002)
Q Consensus 463 ~p~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-------~~L~~L~Ls~ 528 (1002)
+|..|. .+++|+.|+|++|+++++.+..+..+++|++|+|++|+++...+..+..+ ++|+.|+|++
T Consensus 418 ~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~ 497 (636)
T 4eco_A 418 DGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRF 497 (636)
T ss_dssp TTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCS
T ss_pred chhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcC
Confidence 888777 77788888888888886655566678888888888888884333333333 3888999999
Q ss_pred CccCccCccccc--CCccccEEEccCeeecccCCcccccccccceecc------ccccccCCCcccccCCCccceeeCCC
Q 037042 529 NNFSGVIPNAIG--GIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNL------SNNNLSGSIPVSLEKLSYLKDLNLSF 600 (1002)
Q Consensus 529 N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~ 600 (1002)
|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+| ++|++.+.+|..+..+++|++|+|++
T Consensus 498 N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 575 (636)
T 4eco_A 498 NKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGS 575 (636)
T ss_dssp SCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCS
T ss_pred CcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCC
Confidence 9988 5677776 88899999999999987 8888888899999988 67889999999999999999999999
Q ss_pred CcCcccCCCCCCCCCCccccccCCCCCCCC
Q 037042 601 NKLEGEIPKGGSFGNFSAESFEGNKLLCGS 630 (1002)
Q Consensus 601 N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~ 630 (1002)
|++ +.+|.. ....+....+.+|+..|-.
T Consensus 576 N~l-~~ip~~-~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 576 NDI-RKVNEK-ITPNISVLDIKDNPNISID 603 (636)
T ss_dssp SCC-CBCCSC-CCTTCCEEECCSCTTCEEE
T ss_pred CcC-CccCHh-HhCcCCEEECcCCCCcccc
Confidence 999 788876 3367777888899887743
No 30
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.9e-50 Score=446.06 Aligned_cols=268 Identities=23% Similarity=0.387 Sum_probs=216.0
Q ss_pred HHHHHhhcCCCCCceeeccCcceEEEEEeCC------CcEEEEEEeecccc-hhHHHHHHHHHHHHhccC-CCcceeeeE
Q 037042 699 LELCQATDGFSENNLIGRGGFGSVYKARIQD------GMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRH-RNIIKIISC 770 (1002)
Q Consensus 699 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~~~~~ 770 (1002)
.+.+...++|+..+.||+|+||+||+|++.. ++.||||++..... ...+.+.+|+++|++++| ||||+++++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 3333445789999999999999999998542 46799999976543 345679999999999965 899999999
Q ss_pred EecCchhhHHHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEcc
Q 037042 771 CSIGDFKALFKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCD 835 (1002)
Q Consensus 771 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrD 835 (1002)
|...+. ..++|||||++|+|.++++..+ ..+++..+..++.|||+||+||| +++|||||
T Consensus 137 ~~~~~~---~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRD 210 (353)
T 4ase_A 137 CTKPGG---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 210 (353)
T ss_dssp ECCTTS---CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred EEecCC---EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCc
Confidence 865431 3579999999999999997532 34889999999999999999999 89999999
Q ss_pred CCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcc
Q 037042 836 LKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNE 914 (1002)
Q Consensus 836 lkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~ 914 (1002)
|||+|||+++++.+||+|||+|+.+.............||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999998765554444556679999999999999999999999999999999998 9999976
Q ss_pred cccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 915 IFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
...... +... +.++... ..++.++.++.++|.+||+.||++|||+.|+++||+++-+.
T Consensus 291 ~~~~~~-~~~~-----------i~~g~~~-------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 291 VKIDEE-FCRR-----------LKEGTRM-------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CCCSHH-HHHH-----------HHHTCCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCHHHH-HHHH-----------HHcCCCC-------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 432211 1111 1111110 11233567789999999999999999999999999987654
No 31
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=8.8e-50 Score=449.19 Aligned_cols=252 Identities=22% Similarity=0.276 Sum_probs=209.8
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
+.|+..++||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++...+ ..|+|
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~----~~~iV 226 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD----ELWVV 226 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETT----EEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECC----EEEEE
Confidence 46999999999999999999864 69999999998665555677899999999999999999999998876 56899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
||||+||+|.+++... .+++.++..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.+....
T Consensus 227 mEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp EECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred EeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence 9999999999999754 3899999999999999999999 8999999999999999999999999999998775443
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +.... +.........
T Consensus 302 ~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-----~~~~~-----i~~~~~~~~~- 368 (423)
T 4fie_A 302 P--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-----KAMKM-----IRDNLPPRLK- 368 (423)
T ss_dssp C--CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHH-----HHHSCCCCCS-
T ss_pred c--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----HHHHH-----HHcCCCCCCc-
Confidence 2 234568999999999999999999999999999999999999999753211 11110 1111111111
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....++..+.+++.+||..||++|||+.|+++|=+
T Consensus 369 -------~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~ 403 (423)
T 4fie_A 369 -------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 403 (423)
T ss_dssp -------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGG
T ss_pred -------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHH
Confidence 01224567889999999999999999999999854
No 32
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.3e-49 Score=422.92 Aligned_cols=248 Identities=22% Similarity=0.338 Sum_probs=192.7
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|++.+.||+|+||+||+|+. .+|+.||||++++.. ......+.+|++++++++|||||++++++...+ ..
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~----~~ 88 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD----EI 88 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----EE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC----EE
Confidence 6899999999999999999985 479999999997542 234567899999999999999999999998876 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+ +|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+...
T Consensus 89 ~ivmEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 89 IMVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EEEEECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred EEEEeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 8999999 679999997655 5999999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... ....+||+.|||||++.+..| +.++||||+||++|||+||+.||.... ....... +..+
T Consensus 164 ~~~~---~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-----~~~~~~~--------i~~~ 227 (275)
T 3hyh_A 164 DGNF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKN--------ISNG 227 (275)
T ss_dssp --------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHH--------HHHT
T ss_pred CCCc---cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHH--------HHcC
Confidence 4332 244689999999999988876 689999999999999999999997532 1222111 1111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... +...+..+.+++.+||+.||++|||++|+++|=+
T Consensus 228 ~~~~--------p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw 265 (275)
T 3hyh_A 228 VYTL--------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 265 (275)
T ss_dssp CCCC--------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHH
T ss_pred CCCC--------CCCCCHHHHHHHHHHccCChhHCcCHHHHHcCcc
Confidence 1111 1123456889999999999999999999999865
No 33
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.8e-49 Score=429.67 Aligned_cols=250 Identities=23% Similarity=0.293 Sum_probs=198.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
++|++.+.||+|+||+||+|+.. +++.||||++++.. ......+.+|++++++++|||||++++++.+.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~---- 99 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG---- 99 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETT----
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC----
Confidence 56999999999999999999752 47889999997542 222346788999999999999999999998876
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++|||||+||+|.+++.+.+ .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.
T Consensus 100 ~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 100 KLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEEEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 5689999999999999998765 4899999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .+... .+..
T Consensus 176 ~~~~~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----~~~~~--------~i~~ 240 (304)
T 3ubd_A 176 SIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-----KETMT--------MILK 240 (304)
T ss_dssp -----C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH--------HHHH
T ss_pred ccCCCc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-----HHHHH--------HHHc
Confidence 544322 22456899999999999999999999999999999999999999976322 11111 1111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH-----HHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA-----KEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~-----~evl~~L~ 986 (1002)
..... +..++..+.+++.+||++||++|||+ +|+++|=+
T Consensus 241 ~~~~~--------p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~ 284 (304)
T 3ubd_A 241 AKLGM--------PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284 (304)
T ss_dssp CCCCC--------CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGG
T ss_pred CCCCC--------CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCcc
Confidence 11111 12245678899999999999999984 68887743
No 34
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.9e-47 Score=469.29 Aligned_cols=456 Identities=18% Similarity=0.221 Sum_probs=342.2
Q ss_pred CCCCEEeCCCCcccccCCccccCCCCCceEEc-ccccCCCCCccccccccccceeeecccccccc------------ccc
Q 037042 126 PFFESLNLSKNMFHGGIPSALSNCTYLRILRL-SYNDFAGGIPKEIGNLTKLEELYLSFNGLQGA------------YDH 192 (1002)
Q Consensus 126 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L-s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~------------~~~ 192 (1002)
..++.|+|++|.++|.+|++|++|++|++|+| ++|.++|..|..-... .++++...+... ...
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~----~~~l~~~~l~~lr~~~~~~~l~~~~~~ 398 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEEL----TPDMSEERKHRIRMHYKKMFLDYDQRL 398 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCC----CSSCCHHHHHHHHTHHHHHHTCCCGGG
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeeccccccccccccccccc----ccccchhHHHHHHHhhhhhhhccCcch
Confidence 56788888888888888888888888888888 8888877644321111 011111110000 000
Q ss_pred hhhHHhhhchhhcccCCcccCCCCccccCccccceeeccC--cccccccccccccccccceeecccCCCcc---------
Q 037042 193 GFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGL--NKLVGVIPAEIFNMSTIQGVGLQNNSLSG--------- 261 (1002)
Q Consensus 193 ~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~--N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--------- 261 (1002)
.+...... .+..+. ...+-.......++.+.++. |++++ +|..+.++++|+.|+|++|++++
T Consensus 399 ~~s~l~~~----~l~~~~--~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~ 471 (876)
T 4ecn_A 399 NLSDLLQD----AINRNP--EMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWED 471 (876)
T ss_dssp GSCHHHHH----HHHTCT--TSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC
T ss_pred hhhHHHHH----HhhhCc--cccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccc
Confidence 00000000 000000 01111123334555555554 88888 78889999999999999999987
Q ss_pred ---------ccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCc-cCC-CCcccccccc-------ccc
Q 037042 262 ---------SLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNS-FSG-FIPSTFGNLR-------NLK 323 (1002)
Q Consensus 262 ---------~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~ 323 (1002)
.++.+.|..+++|++|+|++|++.+.+|..|.++++|++|+|++|+ +++ .+|..|++++ +|+
T Consensus 472 ~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~ 551 (876)
T 4ecn_A 472 ANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQ 551 (876)
T ss_dssp TTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCC
T ss_pred cccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCcc
Confidence 3333335588999999999999988999999999999999999998 888 7888777776 999
Q ss_pred hhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCC-cc
Q 037042 324 RLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTN-LI 402 (1002)
Q Consensus 324 ~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~-L~ 402 (1002)
.|+|++|+++.+|.. ..+.++++|+.|+|++|.+..++ .+.. .++|+.|+|++|+++ .+|..+..+++ |+
T Consensus 552 ~L~Ls~N~L~~ip~~----~~l~~L~~L~~L~Ls~N~l~~lp---~~~~-L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~ 622 (876)
T 4ecn_A 552 IFYMGYNNLEEFPAS----ASLQKMVKLGLLDCVHNKVRHLE---AFGT-NVKLTDLKLDYNQIE-EIPEDFCAFTDQVE 622 (876)
T ss_dssp EEECCSSCCCBCCCH----HHHTTCTTCCEEECTTSCCCBCC---CCCT-TSEESEEECCSSCCS-CCCTTSCEECTTCC
T ss_pred EEEeeCCcCCccCCh----hhhhcCCCCCEEECCCCCcccch---hhcC-CCcceEEECcCCccc-cchHHHhhccccCC
Confidence 999999999987750 13678889999999999988443 3333 357999999999998 78888999998 99
Q ss_pred EEEccCCccCccCCccccCCCC--CCEEEccCCcccccCCccc---c--CCccccEEEccCCcCCccCCccccCCccCcc
Q 037042 403 GFYLGGNNLNGSIPITLGKLQK--LQVLYFPDNKLEGSIPDEV---C--RLAKVYQLDLSNNKLSGSIPACFGDLASLRN 475 (1002)
Q Consensus 403 ~L~L~~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 475 (1002)
.|+|++|+++ .+|..+..++. |+.|+|++|++++.+|... . .+.+|+.|+|++|+++...+..+..+++|+.
T Consensus 623 ~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~ 701 (876)
T 4ecn_A 623 GLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPIST 701 (876)
T ss_dssp EEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSE
T ss_pred EEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCE
Confidence 9999999998 77888877754 9999999999988766433 2 3458999999999999544445568899999
Q ss_pred cccccccccccCCccccc-------cccCceeeccCCCCCCCCccccc--ccccceeeeCCCCccCccCcccccCCcccc
Q 037042 476 LSLASNELISVIPSTFWN-------LKDILYLNLSSNSLTGPLPLEIG--NLKVLVKIDFSMNNFSGVIPNAIGGIKDLQ 546 (1002)
Q Consensus 476 L~L~~N~l~~~~~~~~~~-------l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 546 (1002)
|+|++|+|..+.+..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+.++++|+
T Consensus 702 L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~ 779 (876)
T 4ecn_A 702 IILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLK 779 (876)
T ss_dssp EECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCC
T ss_pred EECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCC
Confidence 999999998654444443 338999999999999 5777776 89999999999999997 688899999999
Q ss_pred EEEccC------eeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccC
Q 037042 547 FLFLEY------NILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEI 607 (1002)
Q Consensus 547 ~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 607 (1002)
.|+|++ |++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++|+.|||++|++...-
T Consensus 780 ~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~ 843 (876)
T 4ecn_A 780 AFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISID 843 (876)
T ss_dssp EEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEE
T ss_pred EEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccC
Confidence 999976 888889999999999999999999999 68888775 68999999999987543
No 35
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.7e-46 Score=459.08 Aligned_cols=487 Identities=21% Similarity=0.196 Sum_probs=375.2
Q ss_pred cEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeC
Q 037042 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNL 133 (1002)
Q Consensus 54 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L 133 (1002)
+++.|||++|+|++..|.+|.+|++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|...|+++++|++|+|
T Consensus 77 ~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 77 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNV 155 (635)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCC-CCChhhhhcCcccCeecc
Confidence 5889999999999877788999999999999999999777778999999999999999998 677777899999999999
Q ss_pred CCCcccc-cCCccccCCCCCceEEcccccCCCCCccccccccccc----eeeeccccccccccchhhHHhhhchhhcccC
Q 037042 134 SKNMFHG-GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLE----ELYLSFNGLQGAYDHGFLQIFVKNIFVQFSH 208 (1002)
Q Consensus 134 s~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~ 208 (1002)
++|++++ .+|..++++++|++|+|++|+|++..|..|..+.+++ .++++.|.++.+.
T Consensus 156 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~------------------ 217 (635)
T 4g8a_A 156 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQ------------------ 217 (635)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEEC------------------
T ss_pred ccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccC------------------
Confidence 9999986 4688999999999999999999988888888887765 6888899887532
Q ss_pred CcccCCCCccccCccccceeeccCcccccc-cccccccccccceeecccCCCcc--cc---CCccccCCCccchhhcccc
Q 037042 209 NFSKCEIPNEIGNLRNLEVLALGLNKLVGV-IPAEIFNMSTIQGVGLQNNSLSG--SL---QSIPYVRLPNLEELYLWGN 282 (1002)
Q Consensus 209 n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~--~~---~~~~~~~l~~L~~L~Ls~N 282 (1002)
........++.|++.+|..... .+..+..+..++...+..+.... .+ ....+..+..+..+++..+
T Consensus 218 --------~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~ 289 (635)
T 4g8a_A 218 --------PGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 289 (635)
T ss_dssp --------TTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEE
T ss_pred --------cccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhh
Confidence 2333334455666666654422 23344455555554443332211 11 1112223333444444333
Q ss_pred cccc---cccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCC
Q 037042 283 HFSG---SIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSN 359 (1002)
Q Consensus 283 ~l~~---~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N 359 (1002)
.... ..+..+....+++.+++.+|.+.... .+....+|+.|++.+|.+..++. ..++.|+.++++.|
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~--------~~l~~L~~l~l~~n 359 (635)
T 4g8a_A 290 YLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPT--------LKLKSLKRLTFTSN 359 (635)
T ss_dssp CCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCC--------CBCTTCCEEEEESC
T ss_pred hhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCc--------ccchhhhhcccccc
Confidence 3221 22334455667777777777776443 35556677777777777776542 34567777777777
Q ss_pred CCCCcccccccccccccccEEecCCCCCCC--CCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccc
Q 037042 360 SIDGILSRKSVGNLSHSLKIFDMSDCNVSG--SIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEG 437 (1002)
Q Consensus 360 ~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 437 (1002)
.+....... -.++|+.+++++|.+.. ..+..+..+.+|+.|++..|.+.. .+..+..+++|+.++++.|....
T Consensus 360 ~~~~~~~~~----~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~ 434 (635)
T 4g8a_A 360 KGGNAFSEV----DLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQ 434 (635)
T ss_dssp CSCCBCCCC----BCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEES
T ss_pred cCCCCcccc----cccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccc
Confidence 766543221 13467788888887753 345667778899999999998874 55678889999999999888776
Q ss_pred cCC-ccccCCccccEEEccCCcCCccCCccccCCccCcccccccccc-cccCCccccccccCceeeccCCCCCCCCcccc
Q 037042 438 SIP-DEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNEL-ISVIPSTFWNLKDILYLNLSSNSLTGPLPLEI 515 (1002)
Q Consensus 438 ~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 515 (1002)
..+ ..+..+.+++.++++.|.+.+..+..+..+++|+.|+|++|++ .+..|..|..+++|++|+|++|+|++..|..|
T Consensus 435 ~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f 514 (635)
T 4g8a_A 435 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 514 (635)
T ss_dssp TTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHH
Confidence 554 4577899999999999999999999999999999999999974 45678899999999999999999999889999
Q ss_pred cccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccc-cccceeccccccccCC
Q 037042 516 GNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDL-MSLKSLNLSNNNLSGS 582 (1002)
Q Consensus 516 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~ 582 (1002)
.++++|++|+|++|+|+++.|..|.++++|+.|+|++|+|++.+|..|..+ ++|+.|+|++|+++..
T Consensus 515 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 515 NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp TTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred cCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 999999999999999999999999999999999999999999999999988 6899999999999863
No 36
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-47 Score=456.19 Aligned_cols=438 Identities=19% Similarity=0.194 Sum_probs=304.0
Q ss_pred CcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEe
Q 037042 53 HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLN 132 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~ 132 (1002)
.+++.|+|++|.+++..|..+.++++|++|+|++|++++..|..|+++++|++|+|++|+|+ .+|.. .+++|++|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~---~l~~L~~L~ 96 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH---PTVNLKHLD 96 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC---CCCCCSEEE
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc---ccCCccEEe
Confidence 57999999999999888889999999999999999999888999999999999999999999 78877 699999999
Q ss_pred CCCCcccc-cCCccccCCCCCceEEcccccCCCCCcccccccccc--ceeeeccccc--cccccchhhHHhhhchhhccc
Q 037042 133 LSKNMFHG-GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKL--EELYLSFNGL--QGAYDHGFLQIFVKNIFVQFS 207 (1002)
Q Consensus 133 Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~~~~~~~~~~~~~~~~~~ 207 (1002)
|++|++++ .+|..|+++++|++|+|++|++++ ..|..+++| ++|+|++|.+ .+
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~------------------- 154 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEK------------------- 154 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSS-------------------
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccc-------------------
Confidence 99999997 578999999999999999999986 467788888 9999999999 43
Q ss_pred CCcccCCCCccccCcc-ccceeeccCccccccccc-ccccccccceeecccCC-------CccccCCccccCCCccchhh
Q 037042 208 HNFSKCEIPNEIGNLR-NLEVLALGLNKLVGVIPA-EIFNMSTIQGVGLQNNS-------LSGSLQSIPYVRLPNLEELY 278 (1002)
Q Consensus 208 ~n~~~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~-------l~~~~~~~~~~~l~~L~~L~ 278 (1002)
..|..+..+. +...+++++|++.+.++. .+.++++|+.|++++|. +.+.++ .+..+++|+.|+
T Consensus 155 ------~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~--~l~~l~~L~~L~ 226 (520)
T 2z7x_B 155 ------EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA--KLQTNPKLSNLT 226 (520)
T ss_dssp ------CCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH--GGGGCTTCCEEE
T ss_pred ------cccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh--hhccccchhhcc
Confidence 4566666655 345678888888776654 56678899999999987 555554 456788999999
Q ss_pred ccccccccccccccc---ccCCCCeeecCCCccCCCCcccc-----ccccccchhccccccCccchhhhhhhcccCCCCC
Q 037042 279 LWGNHFSGSIPNFIF---NASKLSRLELQKNSFSGFIPSTF-----GNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKY 350 (1002)
Q Consensus 279 Ls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~ 350 (1002)
+++|.+++..+..+. ..++|++|++++|++++.+|..+ +++++|+.+++++|.+ .+|... +..+....+
T Consensus 227 l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~--~~~~~~~~~ 303 (520)
T 2z7x_B 227 LNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSY--IYEIFSNMN 303 (520)
T ss_dssp EEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHH--HHHHHHTCC
T ss_pred ccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhh--hhcccccCc
Confidence 999988764333222 24689999999999998889888 8888899999888888 665221 011111134
Q ss_pred CcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEc
Q 037042 351 LEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYF 430 (1002)
Q Consensus 351 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 430 (1002)
|+.|++++|.+..+ . .+..+++|++|++++|++++.+|..++++++|++|+|
T Consensus 304 L~~L~l~~n~l~~~--------------------------~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 355 (520)
T 2z7x_B 304 IKNFTVSGTRMVHM--------------------------L--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLIL 355 (520)
T ss_dssp CSEEEEESSCCCCC--------------------------C--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEEC
T ss_pred eeEEEcCCCccccc--------------------------c--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEc
Confidence 55555555554322 1 1145556666666666666656666666666666666
Q ss_pred cCCcccc--cCCccccCCccccEEEccCCcCCccCCc-cccCCccCcccccccccccccCCccccccccCceeeccCCCC
Q 037042 431 PDNKLEG--SIPDEVCRLAKVYQLDLSNNKLSGSIPA-CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSL 507 (1002)
Q Consensus 431 ~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 507 (1002)
++|++++ .+|..+..+++|++|+|++|++++.+|. .|..+++|+.|++++|++++..|..+.
T Consensus 356 ~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--------------- 420 (520)
T 2z7x_B 356 QMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--------------- 420 (520)
T ss_dssp CSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC---------------
T ss_pred cCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc---------------
Confidence 6666654 3344555555566666665555542332 344445555555555554443333322
Q ss_pred CCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCC
Q 037042 508 TGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGS 582 (1002)
Q Consensus 508 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 582 (1002)
++|+.|++++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++.
T Consensus 421 -----------~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 421 -----------PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp -----------TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred -----------ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCccc
Confidence 34445555555554 3344444555555555555555532222255555555555555555543
No 37
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.4e-47 Score=460.61 Aligned_cols=462 Identities=20% Similarity=0.206 Sum_probs=338.3
Q ss_pred CCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcc
Q 037042 79 LQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLS 158 (1002)
Q Consensus 79 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 158 (1002)
.+++++++|+++ .+|..+. ++|++|+|++|+++ .+|...|.++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 33 ~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 33 ESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSIS-ELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCC-CCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCcc-ccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 377777777777 4665553 56667777776666 3444444566666666666666666666666666666666666
Q ss_pred cccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccc
Q 037042 159 YNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGV 238 (1002)
Q Consensus 159 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 238 (1002)
+|+|+ .+|.. .+++|++|+|++|++++. .+|..++++++|++|+|++|++++.
T Consensus 109 ~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l------------------------~~p~~~~~l~~L~~L~L~~n~l~~~ 161 (562)
T 3a79_B 109 HNRLQ-NISCC--PMASLRHLDLSFNDFDVL------------------------PVCKEFGNLTKLTFLGLSAAKFRQL 161 (562)
T ss_dssp TSCCC-EECSC--CCTTCSEEECCSSCCSBC------------------------CCCGGGGGCTTCCEEEEECSBCCTT
T ss_pred CCcCC-ccCcc--ccccCCEEECCCCCcccc------------------------CchHhhcccCcccEEecCCCccccC
Confidence 66666 45544 566666666666666532 2345566666666666666665531
Q ss_pred cccccccccccceeecccCCCccccCCccccCCCcc--chhhcccccc--cccccccccccC-CCCeeecCCCccCCCCc
Q 037042 239 IPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNL--EELYLWGNHF--SGSIPNFIFNAS-KLSRLELQKNSFSGFIP 313 (1002)
Q Consensus 239 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p 313 (1002)
.+ ..+++| ++|+|++|++ ++..|..+..+. +.-.+++++|.+.+.++
T Consensus 162 ---~~-------------------------~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~ 213 (562)
T 3a79_B 162 ---DL-------------------------LPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQV 213 (562)
T ss_dssp ---TT-------------------------GGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCC
T ss_pred ---ch-------------------------hhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhh
Confidence 22 223333 6677777776 666676666643 12256788888877554
Q ss_pred c-ccccccccchhccccccC--ccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccccc-ccccccccEEecCCCCCCC
Q 037042 314 S-TFGNLRNLKRLGLNNNHL--TSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSV-GNLSHSLKIFDMSDCNVSG 389 (1002)
Q Consensus 314 ~-~~~~l~~L~~L~L~~N~l--~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~~~~L~~L~L~~N~l~~ 389 (1002)
. .+.++++|+.|++++|+. +.++. .+..+..+++|+.++++++.+.+....... .....+|++|++++|+++|
T Consensus 214 ~~~~~~l~~L~~L~l~~n~~~~~~l~~---~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 290 (562)
T 3a79_B 214 NMSVNALGHLQLSNIKLNDENCQRLMT---FLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITE 290 (562)
T ss_dssp EEEESSEEEEEEEEEECCSTTHHHHHH---HHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECS
T ss_pred hhcccccceEEEecccccccccchHHH---HHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeec
Confidence 4 567788899999998862 22222 224567788888888888877643211110 0112379999999999999
Q ss_pred CCCccc-----CCCCCccEEEccCCccCccCC-ccccCC---CCCCEEEccCCcccccCCccccCCccccEEEccCCcCC
Q 037042 390 SIPEEI-----GNLTNLIGFYLGGNNLNGSIP-ITLGKL---QKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS 460 (1002)
Q Consensus 390 ~~p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 460 (1002)
.+|..+ ..++.|+.+++..|.+ .+| ..+..+ .+|+.|++++|.+.... ....+++|++|+|++|+++
T Consensus 291 ~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~ 366 (562)
T 3a79_B 291 RIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFT 366 (562)
T ss_dssp CCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCC
T ss_pred cccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccc
Confidence 999888 8888888888888888 344 333332 67999999999986432 1267899999999999999
Q ss_pred ccCCccccCCccCcccccccccccccC--CccccccccCceeeccCCCCCCCCc-ccccccccceeeeCCCCccCccCcc
Q 037042 461 GSIPACFGDLASLRNLSLASNELISVI--PSTFWNLKDILYLNLSSNSLTGPLP-LEIGNLKVLVKIDFSMNNFSGVIPN 537 (1002)
Q Consensus 461 ~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~ 537 (1002)
+..|..|+.+++|+.|+|++|+++++. |..|.++++|++|++++|++++.+| ..+..+++|+.|++++|++++.+|.
T Consensus 367 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 446 (562)
T 3a79_B 367 DSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFR 446 (562)
T ss_dssp TTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGS
T ss_pred cchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhh
Confidence 999999999999999999999999843 5679999999999999999998444 4689999999999999999988777
Q ss_pred cccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCccc-ccCCCccceeeCCCCcCcccCCCC
Q 037042 538 AIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVS-LEKLSYLKDLNLSFNKLEGEIPKG 610 (1002)
Q Consensus 538 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~ 610 (1002)
.+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++ +|.. +..+++|+.|+|++|+++|.+|..
T Consensus 447 ~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 447 CLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp SCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHHHH
T ss_pred hhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcchH
Confidence 665 79999999999999 677777799999999999999995 5555 999999999999999999987753
No 38
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.2e-47 Score=417.74 Aligned_cols=264 Identities=22% Similarity=0.357 Sum_probs=193.7
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh-----
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA----- 778 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~----- 778 (1002)
++|++.+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|+++|++++|||||++++++...+...
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 35889999999999999999864 79999999997543 334577899999999999999999999987654221
Q ss_pred ---HHHHHhhccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEec
Q 037042 779 ---LFKALALEYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSD 853 (1002)
Q Consensus 779 ---~~~~lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 853 (1002)
.+.++|||||++|+|.+++..... ..++..++.++.||++||+||| +++|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 124699999999999999986543 4566778899999999999999 89999999999999999999999999
Q ss_pred ccccccccCCCcee----------eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHH
Q 037042 854 FGITKLLTREDQFV----------TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLK 923 (1002)
Q Consensus 854 fGla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~ 923 (1002)
||+|+.+....... ..+..+||+.|||||++.+..|+.++||||+||++|||++ ||...... .
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~----~ 234 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER----V 234 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH----H
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH----H
Confidence 99998775433211 1234579999999999999999999999999999999996 77542111 0
Q ss_pred HHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCC
Q 037042 924 HWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNG 995 (1002)
Q Consensus 924 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~ 995 (1002)
. .+..+.+... +. ......+...+++.+||+.||++|||+.|+++|-+ +++.+++.
T Consensus 235 ~--------~~~~~~~~~~--p~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~-~~~~~~p~ 290 (299)
T 4g31_A 235 R--------TLTDVRNLKF--PP-----LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAV-FEDLDFPG 290 (299)
T ss_dssp H--------HHHHHHTTCC--CH-----HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG-GCCC----
T ss_pred H--------HHHHHhcCCC--CC-----CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHh-hCCCCCCC
Confidence 0 0111111111 10 11223455678999999999999999999999744 45555443
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9.1e-46 Score=444.72 Aligned_cols=459 Identities=23% Similarity=0.211 Sum_probs=312.2
Q ss_pred EEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCC
Q 037042 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSK 135 (1002)
Q Consensus 56 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~ 135 (1002)
+.+|++++++++ +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++ ++...|.++++|++|+|++
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRS-LDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCE-ECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCc-CCHHHhCCCCCCCEEECCC
Confidence 799999999994 888775 899999999999998888999999999999999999995 4445568899999999999
Q ss_pred CcccccCCccccCCCCCceEEcccccCCC-CCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCC
Q 037042 136 NMFHGGIPSALSNCTYLRILRLSYNDFAG-GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCE 214 (1002)
Q Consensus 136 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 214 (1002)
|+|+ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++.
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~------------------------- 161 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL------------------------- 161 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT-------------------------
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC-------------------------
Confidence 9999 67766 89999999999999986 4578999999999999999999741
Q ss_pred CCccccCccc--cceeeccCccc--cccccccccccc-ccceeecccCCCccccCCccccCCCccchhhccccc-----c
Q 037042 215 IPNEIGNLRN--LEVLALGLNKL--VGVIPAEIFNMS-TIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNH-----F 284 (1002)
Q Consensus 215 ~p~~l~~l~~--L~~L~L~~N~l--~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~-----l 284 (1002)
.+..+++ |++|++++|++ ++..|..+..+. +.-.+++++|.+.+.+....+..+++|+.|++++|+ +
T Consensus 162 ---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l 238 (562)
T 3a79_B 162 ---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRL 238 (562)
T ss_dssp ---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHH
T ss_pred ---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchH
Confidence 2333444 49999999999 888888888765 223568888888877777777788888888888885 2
Q ss_pred cccccccccccCCCCeeecCCCccCCCCccc---cccccccchhccccccCc-cchhhhhhhcccCCCCCCcEEeCCCCC
Q 037042 285 SGSIPNFIFNASKLSRLELQKNSFSGFIPST---FGNLRNLKRLGLNNNHLT-SLTLELSFLSSLSNCKYLEFIDLSSNS 360 (1002)
Q Consensus 285 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~l~~l~~L~~L~Ls~N~ 360 (1002)
.+. ...+..+++|+.|+|+++.+++..... ....++|++|++++|+++ .+|..+. ......++.|+.++++.|.
T Consensus 239 ~~~-~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~-~~~~~~L~~L~~~~~~~~~ 316 (562)
T 3a79_B 239 MTF-LSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEF-TYSETALKSLMIEHVKNQV 316 (562)
T ss_dssp HHH-HHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCC-CCCSCSCCEEEEEEEEECC
T ss_pred HHH-HHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhh-hcccccchheehhhcccce
Confidence 222 234566677777777776665321111 112236667777777666 4443210 0001344444444444444
Q ss_pred CCCcccccccccccccccEEecCCCCCCCCCC-cccCC---CCCccEEEccCCccCccCCccccCCCCCCEEEccCCccc
Q 037042 361 IDGILSRKSVGNLSHSLKIFDMSDCNVSGSIP-EEIGN---LTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLE 436 (1002)
Q Consensus 361 l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p-~~~~~---l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 436 (1002)
+ .+| ..+.. ..+|+.|++++|.+.... ....+++|++|++++|+++
T Consensus 317 ~----------------------------~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~ 366 (562)
T 3a79_B 317 F----------------------------LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFT 366 (562)
T ss_dssp C----------------------------SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCC
T ss_pred e----------------------------ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccc
Confidence 3 112 11111 134555555555553211 1145556666666666666
Q ss_pred ccCCccccCCccccEEEccCCcCCcc--CCccccCCccCcccccccccccc-cCCccccccccCceeeccCCCCCCCCcc
Q 037042 437 GSIPDEVCRLAKVYQLDLSNNKLSGS--IPACFGDLASLRNLSLASNELIS-VIPSTFWNLKDILYLNLSSNSLTGPLPL 513 (1002)
Q Consensus 437 ~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 513 (1002)
+.+|..+..+++|+.|+|++|++++. +|..|..+++|+.|++++|++.+ +.+..|..+++|++|++++|++++..|.
T Consensus 367 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 446 (562)
T 3a79_B 367 DSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFR 446 (562)
T ss_dssp TTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGS
T ss_pred cchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhh
Confidence 55566666666666666666666542 23456666666666666666665 3334466666777777777776655544
Q ss_pred cccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCc
Q 037042 514 EIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIP 584 (1002)
Q Consensus 514 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 584 (1002)
.+. ++|+.|+|++|+|+ .+|..+.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|
T Consensus 447 ~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 447 CLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp SCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred hhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 443 56777777777777 445555577777777777777774333337777777777888777776544
No 40
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=9.1e-45 Score=401.42 Aligned_cols=296 Identities=30% Similarity=0.465 Sum_probs=272.0
Q ss_pred CCChhHHHHHHHHHHhccCCCCCccccCCCCCCCCCc--ccccEeeCCC--CcEEEEEeCCCCCcc--ccCcccCCCCCC
Q 037042 6 SNITTDLDALHALKTHITNDPTNFFAKNWNSSISFCN--WTGVTCDVHS--HRVTALNISHLSLSG--TIPSRLGNLSSL 79 (1002)
Q Consensus 6 ~~~~~~~~~l~~~k~~~~~~~~~~~~~~w~~~~~~c~--w~gv~c~~~~--~~v~~L~l~~~~l~~--~~p~~l~~l~~L 79 (1002)
.|.++|++||++||+++. ||. .+ ++|..+.+||. |.||+|+..+ ++|+.|+|++|+++| .+|+.++++++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l-~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TL-SSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GG-TTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-cc-cCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 589999999999999994 676 44 58988889998 9999999765 899999999999999 999999999999
Q ss_pred CEEEccc-CCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcc
Q 037042 80 QSLFLHS-NQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLS 158 (1002)
Q Consensus 80 ~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 158 (1002)
++|+|++ |.+++.+|..|+++++|++|+|++|++++.+|..+ .++++|++|+|++|.+++.+|..|+++++|++|+|+
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 157 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL-SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGG-GGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHH-hCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECc
Confidence 9999995 99999999999999999999999999999998876 679999999999999999999999999999999999
Q ss_pred cccCCCCCcccccccc-ccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCccccc
Q 037042 159 YNDFAGGIPKEIGNLT-KLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG 237 (1002)
Q Consensus 159 ~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~ 237 (1002)
+|++++.+|..|.+++ +|++|+|++|++++ .+|..++.++ |++|+|++|++++
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~-------------------------~~~~~~~~l~-L~~L~Ls~N~l~~ 211 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTG-------------------------KIPPTFANLN-LAFVDLSRNMLEG 211 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEE-------------------------ECCGGGGGCC-CSEEECCSSEEEE
T ss_pred CCcccCcCCHHHhhhhhcCcEEECcCCeeec-------------------------cCChHHhCCc-ccEEECcCCcccC
Confidence 9999999999999998 99999999999986 5778888887 9999999999999
Q ss_pred ccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccc
Q 037042 238 VIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFG 317 (1002)
Q Consensus 238 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 317 (1002)
.+|..+..+++|+.|+|++|++++.++. +..+++|++|+|++|++++.+|..+..+++|++|+|++|++++.+|.. +
T Consensus 212 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~ 288 (313)
T 1ogq_A 212 DASVLFGSDKNTQKIHLAKNSLAFDLGK--VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-G 288 (313)
T ss_dssp CCGGGCCTTSCCSEEECCSSEECCBGGG--CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-T
T ss_pred cCCHHHhcCCCCCEEECCCCceeeecCc--ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-c
Confidence 9999999999999999999999876665 567889999999999999899999999999999999999999888876 8
Q ss_pred cccccchhcccccc-Ccc
Q 037042 318 NLRNLKRLGLNNNH-LTS 334 (1002)
Q Consensus 318 ~l~~L~~L~L~~N~-l~~ 334 (1002)
.+++|+.|++++|+ +..
T Consensus 289 ~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 289 NLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp TGGGSCGGGTCSSSEEES
T ss_pred cccccChHHhcCCCCccC
Confidence 89999999999987 443
No 41
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-45 Score=414.73 Aligned_cols=275 Identities=21% Similarity=0.208 Sum_probs=204.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCch--hhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--KAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~ 779 (1002)
.++|++.+.||+|+||+||+|+.. +|+.||||++++.. ....+.+.+|+++|++++|||||++++++..... ...
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 357999999999999999999864 79999999997543 2345678899999999999999999998865321 112
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..|+|||||+ |+|.+++...+ .+++..+..++.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 4579999996 68999997755 5999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCc--eeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh--h
Q 037042 860 LTREDQ--FVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS--I 934 (1002)
Q Consensus 860 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~ 934 (1002)
+..... .......+||+.|||||++.+. .|+.++||||+||++|||++|++||...... ..+........... .
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~~~g~p~~~~ 286 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMMVLGTPSPAV 286 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCGGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCChHH
Confidence 644321 1223456899999999987775 5699999999999999999999999763221 11111111100000 0
Q ss_pred hh-c--------ccCccC-ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 935 MK-I--------VDGSLL-SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 935 ~~-i--------~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.. + ...... ....... ........+.+++.+||.+||++|||+.|+++|=+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~ 347 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWET-VYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 347 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHH-HSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGG
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHH-hCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHh
Confidence 00 0 000000 0000000 01123467889999999999999999999999844
No 42
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.3e-43 Score=415.13 Aligned_cols=385 Identities=20% Similarity=0.226 Sum_probs=274.8
Q ss_pred CCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccc
Q 037042 61 SHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHG 140 (1002)
Q Consensus 61 ~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~ 140 (1002)
++++++ .+|. +. ++|++|+|++|.+++..|..|.++++|++|+|++|.+.+.+|...|.++++|++|+|++|++++
T Consensus 18 ~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~ 93 (455)
T 3v47_A 18 INRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQ 93 (455)
T ss_dssp CSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCE
T ss_pred CCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCc
Confidence 344555 5666 32 7899999999999988899999999999999999999888988888999999999999999998
Q ss_pred cCCccccCCCCCceEEcccccCCCCCccc--cccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCcc
Q 037042 141 GIPSALSNCTYLRILRLSYNDFAGGIPKE--IGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNE 218 (1002)
Q Consensus 141 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~ 218 (1002)
..|..|+++++|++|+|++|++++.+|.. |.++++|++|+|++|++++ ..|..
T Consensus 94 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~-------------------------~~~~~ 148 (455)
T 3v47_A 94 LETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKK-------------------------IQPAS 148 (455)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCS-------------------------CCCCG
T ss_pred cChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCc-------------------------cCccc
Confidence 88999999999999999999999766655 9999999999999999985 23554
Q ss_pred -ccCccccceeeccCcccccccccccccc--cccceeecccCCCccccCCccccCCCccchhhccccccccccccccccc
Q 037042 219 -IGNLRNLEVLALGLNKLVGVIPAEIFNM--STIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA 295 (1002)
Q Consensus 219 -l~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 295 (1002)
++++++|++|++++|++++..|..+..+ .+|+.|++++|.+.+..+. .+ .......+..+
T Consensus 149 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~-~~----------------~~~~~~~~~~~ 211 (455)
T 3v47_A 149 FFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEY-WL----------------GWEKCGNPFKN 211 (455)
T ss_dssp GGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTT-CT----------------THHHHCCTTTT
T ss_pred ccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchh-hc----------------ccccccccccc
Confidence 7889999999999999998888887765 4666666666666522111 00 00001112344
Q ss_pred CCCCeeecCCCccCCCCccccccc---cccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccccccc
Q 037042 296 SKLSRLELQKNSFSGFIPSTFGNL---RNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGN 372 (1002)
Q Consensus 296 ~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 372 (1002)
++|++|+|++|++++..|..|..+ ++|+.|++++|.+....
T Consensus 212 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~------------------------------------ 255 (455)
T 3v47_A 212 TSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS------------------------------------ 255 (455)
T ss_dssp CEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC------------------------------------
T ss_pred ceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc------------------------------------
Confidence 556666666666665555555443 44445555444433211
Q ss_pred ccccccEEecCCCCCCCCCCcccCCC--CCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCcccc
Q 037042 373 LSHSLKIFDMSDCNVSGSIPEEIGNL--TNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVY 450 (1002)
Q Consensus 373 ~~~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 450 (1002)
+..+.+.+..+..+..+ ++|+.|++++|++++..|..|..+++|++|+|++|++++..|..|..+++|+
T Consensus 256 ---------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 326 (455)
T 3v47_A 256 ---------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLL 326 (455)
T ss_dssp ---------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ---------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCC
Confidence 11111222222222222 4667777777777766677777777777777777777766666777777777
Q ss_pred EEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCc
Q 037042 451 QLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNN 530 (1002)
Q Consensus 451 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 530 (1002)
+|+|++|++++..|..|..+++|+.|+|++|++++..|..|.++++|++|++++|++++..+..+..+++|+.|++++|.
T Consensus 327 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 406 (455)
T 3v47_A 327 KLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 406 (455)
T ss_dssp EEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCC
Confidence 77777777776667777777777777777777777777777777777777777777776666667777777777777777
Q ss_pred cCccCc
Q 037042 531 FSGVIP 536 (1002)
Q Consensus 531 l~~~~p 536 (1002)
+++..|
T Consensus 407 l~~~~~ 412 (455)
T 3v47_A 407 WDCSCP 412 (455)
T ss_dssp BCCCTT
T ss_pred cccCCC
Confidence 776655
No 43
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6.3e-45 Score=407.36 Aligned_cols=271 Identities=20% Similarity=0.264 Sum_probs=202.0
Q ss_pred HhhcCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1002)
...++|++.+.||+|+||+||+|+.+ +++.||||++.+.. ....+.+|+++++.+ +|||||++++++...+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~-- 93 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND-- 93 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT--
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC--
Confidence 34578999999999999999999743 47889999987643 345678899999998 6999999999998776
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC-CcEEEecccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN-MVAHLSDFGI 856 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGl 856 (1002)
..++||||+++|+|.+++. .+++.+++.++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+
T Consensus 94 --~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGl 164 (361)
T 4f9c_A 94 --HVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGL 164 (361)
T ss_dssp --EEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred --EEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence 6689999999999999984 3889999999999999999999 9999999999999999876 8999999999
Q ss_pred cccccCCCc--------------------------eeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCC
Q 037042 857 TKLLTREDQ--------------------------FVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGK 909 (1002)
Q Consensus 857 a~~~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~ 909 (1002)
|+....... ....+..+||+.|||||++.+. .|+.++||||+||++|||++|+
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~ 244 (361)
T 4f9c_A 165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244 (361)
T ss_dssp CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence 986543211 0112345799999999988765 5899999999999999999999
Q ss_pred CCCcccccccccHHHHHHHHHhhh---hhh-----cc-cCccCChhh-------------------------hHHHhHHH
Q 037042 910 KPTNEIFNEGMTLKHWVNDWLLIS---IMK-----IV-DGSLLSRED-------------------------IQFVAKEQ 955 (1002)
Q Consensus 910 ~P~~~~~~~~~~~~~~~~~~~~~~---~~~-----i~-~~~~~~~~~-------------------------~~~~~~~~ 955 (1002)
.||.....+...+........... ..+ +. ......... ........
T Consensus 245 ~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 324 (361)
T 4f9c_A 245 YPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNE 324 (361)
T ss_dssp SSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTT
T ss_pred CCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccccccccccccc
Confidence 999764433222222221110000 000 00 000000000 00001112
Q ss_pred HHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 956 CMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 956 ~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.++++.+++.+||++||++|||++|+++|=+
T Consensus 325 is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~ 355 (361)
T 4f9c_A 325 VPDEAYDLLDKLLDLNPASRITAEEALLHPF 355 (361)
T ss_dssp CCHHHHHHHHHHTCSCTTTSCCHHHHHTSGG
T ss_pred CCHHHHHHHHHHCcCChhHCcCHHHHhcCcc
Confidence 3467889999999999999999999998843
No 44
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.9e-43 Score=410.38 Aligned_cols=401 Identities=27% Similarity=0.340 Sum_probs=261.1
Q ss_pred cCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceee
Q 037042 101 HTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELY 180 (1002)
Q Consensus 101 ~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 180 (1002)
+.|++|++++|.+ |.+|.++ +++++|++|++++|.++|.+|.+++++++|+.++++.|.. .+|++|+
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i-~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L~ 77 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEA-ENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHELE 77 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEEE
T ss_pred ccchhhhcccCch-hhCChhH-hcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEEE
Confidence 4455555555555 4555443 3455555555555555555555555554444443333321 2347777
Q ss_pred eccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCc
Q 037042 181 LSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLS 260 (1002)
Q Consensus 181 Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 260 (1002)
+++|++++ +|.. .++|++|++++|++++ +|.. +++|+.|++++|+++
T Consensus 78 l~~~~l~~--------------------------lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~ 124 (454)
T 1jl5_A 78 LNNLGLSS--------------------------LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK 124 (454)
T ss_dssp CTTSCCSC--------------------------CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS
T ss_pred ecCCcccc--------------------------CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC
Confidence 77777764 3331 2578888888888887 5543 377888888888887
Q ss_pred cccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhh
Q 037042 261 GSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELS 340 (1002)
Q Consensus 261 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~ 340 (1002)
+ ++.. .++|++|+|++|++++ +| .+.++++|++|++++|++++ +|..+ .+|++|++++|+++.+|
T Consensus 125 ~-l~~~----~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l~---- 189 (454)
T 1jl5_A 125 A-LSDL----PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEELP---- 189 (454)
T ss_dssp C-CCSC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSCC----
T ss_pred c-ccCC----CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcCc----
Confidence 4 3222 2689999999999986 66 58889999999999999986 45443 58999999999998875
Q ss_pred hhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCcccc
Q 037042 341 FLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLG 420 (1002)
Q Consensus 341 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 420 (1002)
.+.++++|++|++++|+++++.. .+.+|+.|++++|+++ .+| .++.+++|++|++++|++++ +|..
T Consensus 190 ---~~~~l~~L~~L~l~~N~l~~l~~------~~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~-- 255 (454)
T 1jl5_A 190 ---ELQNLPFLTAIYADNNSLKKLPD------LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL-- 255 (454)
T ss_dssp ---CCTTCTTCCEEECCSSCCSSCCC------CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC--
T ss_pred ---cccCCCCCCEEECCCCcCCcCCC------CcCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc--
Confidence 27889999999999999987532 2358999999999998 667 48999999999999999986 4543
Q ss_pred CCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCcccccc-ccCce
Q 037042 421 KLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNL-KDILY 499 (1002)
Q Consensus 421 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~ 499 (1002)
+++|+.|++++|++++ +|.. .++|+.|++++|++++. |.. .++|+.|++++|+++++. .+ ++|++
T Consensus 256 -~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i~-----~~~~~L~~ 321 (454)
T 1jl5_A 256 -PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSLC-----DLPPSLEE 321 (454)
T ss_dssp -CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEEC-----CCCTTCCE
T ss_pred -ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCccc-----CCcCcCCE
Confidence 4789999999999996 5554 37899999999999873 221 268999999999998742 23 58999
Q ss_pred eeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecc--cCCcccccccccceeccccc
Q 037042 500 LNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQG--SIPDSFGDLMSLKSLNLSNN 577 (1002)
Q Consensus 500 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N 577 (1002)
|++++|++++ +|.. +++|+.|++++|++++ +|. .+++|+.|+|++|++++ .+|.+++.+ +.|
T Consensus 322 L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n 385 (454)
T 1jl5_A 322 LNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMN 385 (454)
T ss_dssp EECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECC
T ss_pred EECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhc
Confidence 9999999997 5544 5789999999999985 455 47899999999999998 677766543 346
Q ss_pred cccCCCcccccCCCccceeeCCCCcCcc--cCCC
Q 037042 578 NLSGSIPVSLEKLSYLKDLNLSFNKLEG--EIPK 609 (1002)
Q Consensus 578 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~ 609 (1002)
++.+.+|.. +++|+.|++++|++++ .+|.
T Consensus 386 ~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 386 SHLAEVPEL---PQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp C---------------------------------
T ss_pred ccccccccc---cCcCCEEECCCCcCCccccchh
Confidence 667777763 4678888888888887 6664
No 45
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=3.3e-43 Score=408.34 Aligned_cols=419 Identities=23% Similarity=0.280 Sum_probs=214.6
Q ss_pred CcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEe
Q 037042 53 HRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLN 132 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~ 132 (1002)
.+++.|++++|.+ |.+|+++++|++|++|+|++|.++|.+|.+++++.+|+.+++..|.. .++++|+
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~------------~~l~~L~ 77 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD------------RQAHELE 77 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH------------HTCSEEE
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc------------cCCCEEE
Confidence 3567777777777 67777777777777777777777777777777777765555555432 2457788
Q ss_pred CCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCccc
Q 037042 133 LSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSK 212 (1002)
Q Consensus 133 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~ 212 (1002)
+++|.+++ +|.. .++|++|+|++|++++ +|.. +++|++|++++|++++.
T Consensus 78 l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l----------------------- 126 (454)
T 1jl5_A 78 LNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL----------------------- 126 (454)
T ss_dssp CTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-----------------------
T ss_pred ecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-----------------------
Confidence 88888774 4432 3577888888888875 6643 36778888888877642
Q ss_pred CCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccc
Q 037042 213 CEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFI 292 (1002)
Q Consensus 213 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 292 (1002)
|.. .++|++|++++|++++ +| .+.++++|++|++++|++++ ++.. .++|++|++++|++++ +| .+
T Consensus 127 ---~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~ 191 (454)
T 1jl5_A 127 ---SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-EL 191 (454)
T ss_dssp ---CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CC
T ss_pred ---cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cc
Confidence 211 1577788888888876 55 47777777777777777764 3322 2477777787777775 45 47
Q ss_pred cccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccccccc
Q 037042 293 FNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGN 372 (1002)
Q Consensus 293 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 372 (1002)
.++++|++|++++|+++++ |... ++|++|++++|+++.+|. +..+++|++|++++|+++++..
T Consensus 192 ~~l~~L~~L~l~~N~l~~l-~~~~---~~L~~L~l~~n~l~~lp~-------~~~l~~L~~L~l~~N~l~~l~~------ 254 (454)
T 1jl5_A 192 QNLPFLTAIYADNNSLKKL-PDLP---LSLESIVAGNNILEELPE-------LQNLPFLTTIYADNNLLKTLPD------ 254 (454)
T ss_dssp TTCTTCCEEECCSSCCSSC-CCCC---TTCCEEECCSSCCSSCCC-------CTTCTTCCEEECCSSCCSSCCS------
T ss_pred cCCCCCCEEECCCCcCCcC-CCCc---CcccEEECcCCcCCcccc-------cCCCCCCCEEECCCCcCCcccc------
Confidence 7777888888888877753 3322 477777888887776652 5677777777777777765421
Q ss_pred ccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEE
Q 037042 373 LSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQL 452 (1002)
Q Consensus 373 ~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 452 (1002)
...+|+.|++++|++++ +|.. .++|+.|++++|++++. |.. .++|+.|
T Consensus 255 ~~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-------------------------~~~---~~~L~~L 302 (454)
T 1jl5_A 255 LPPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-------------------------SEL---PPNLYYL 302 (454)
T ss_dssp CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-------------------------SCC---CTTCCEE
T ss_pred cccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-------------------------cCc---CCcCCEE
Confidence 12345555555555553 2322 13444555555544431 110 1345555
Q ss_pred EccCCcCCccCCccccCC-ccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCcc
Q 037042 453 DLSNNKLSGSIPACFGDL-ASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNF 531 (1002)
Q Consensus 453 ~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 531 (1002)
++++|++++. + .+ ++|+.|++++|++++ +|.. +++|++|++++|++++ +|. .+++|+.|++++|++
T Consensus 303 ~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l 369 (454)
T 1jl5_A 303 NASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPL 369 (454)
T ss_dssp ECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred ECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCC
Confidence 5555555431 1 12 355566666666555 2322 3566777777777764 444 356777777777777
Q ss_pred Cc--cCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccC--CCcccccCCCccceeeCCCCcCcccC
Q 037042 532 SG--VIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSG--SIPVSLEKLSYLKDLNLSFNKLEGEI 607 (1002)
Q Consensus 532 ~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~ 607 (1002)
++ .+|..++. |+.|.+.+.+|.. +++|+.|++++|++++ .+|. +|+.|.+.+|.+.+.+
T Consensus 370 ~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~------sl~~L~~~~~~~~~~~ 432 (454)
T 1jl5_A 370 REFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE------SVEDLRMNSERVVDPY 432 (454)
T ss_dssp SSCCCCCTTCCE--------EECCC-------------------------------------------------------
T ss_pred CcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccchh------hHhheeCcCcccCCcc
Confidence 76 45555442 3346666666653 4678888888888886 5554 3556677888888776
Q ss_pred CC
Q 037042 608 PK 609 (1002)
Q Consensus 608 p~ 609 (1002)
|.
T Consensus 433 ~~ 434 (454)
T 1jl5_A 433 EF 434 (454)
T ss_dssp --
T ss_pred cc
Confidence 64
No 46
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4e-44 Score=425.38 Aligned_cols=255 Identities=18% Similarity=0.241 Sum_probs=212.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|++.+.||+|+||+||+|+.. +|+.||+|++........+.+.+|+++|+.++|||||++++++.... ..++
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~----~~~i 231 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN----EMVM 231 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS----EEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC----EEEE
Confidence 367999999999999999999864 79999999998766556678899999999999999999999998876 5689
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC--CcEEEeccccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN--MVAHLSDFGITKLLT 861 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~--~~~kl~DfGla~~~~ 861 (1002)
|||||+||+|.+++......+++.++..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 232 v~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 232 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp EEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred EEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 99999999999999776667999999999999999999999 8999999999999999854 899999999999886
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
..... ...+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +.. ..+....
T Consensus 309 ~~~~~---~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-----~~~--------~~i~~~~ 372 (573)
T 3uto_A 309 PKQSV---KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-----ETL--------RNVKSCD 372 (573)
T ss_dssp TTSEE---EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHH--------HHHHTTC
T ss_pred CCCce---eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----HHH--------HHHHhCC
Confidence 65432 3457999999999999999999999999999999999999999764221 111 1111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
...... ....++..+.+++.+||+.||.+|||+.|+++|=+
T Consensus 373 ~~~~~~----~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw 413 (573)
T 3uto_A 373 WNMDDS----AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPW 413 (573)
T ss_dssp CCCCSG----GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred CCCCcc----cccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcC
Confidence 111100 11224567889999999999999999999999854
No 47
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1e-42 Score=407.35 Aligned_cols=378 Identities=19% Similarity=0.251 Sum_probs=290.1
Q ss_pred CCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhccccccccccccccc
Q 037042 214 EIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIF 293 (1002)
Q Consensus 214 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 293 (1002)
.+|. +. ++|++|+|++|++++..|..|.++++|++|+|++|.+.+.++...|..+++|++|+|++|++++..|..|.
T Consensus 24 ~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 100 (455)
T 3v47_A 24 QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFN 100 (455)
T ss_dssp SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTT
T ss_pred cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhcc
Confidence 4665 22 78999999999999888999999999999999999988777777788888888888888888888888888
Q ss_pred ccCCCCeeecCCCccCCCCccc--cccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccc
Q 037042 294 NASKLSRLELQKNSFSGFIPST--FGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVG 371 (1002)
Q Consensus 294 ~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 371 (1002)
++++|++|+|++|++++..|.. |+++++|++|+|++|+++.+... ..+.++++|++|++++|.+.++.+.....
T Consensus 101 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~----~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 176 (455)
T 3v47_A 101 GLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPA----SFFLNMRRFHVLDLTFNKVKSICEEDLLN 176 (455)
T ss_dssp TCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCC----GGGGGCTTCCEEECTTCCBSCCCTTTSGG
T ss_pred CcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcc----cccCCCCcccEEeCCCCcccccChhhhhc
Confidence 8888888888888888755544 88888888888888888876322 11567777888888888777654432221
Q ss_pred cccccccEEecCCCCCCCCCCccc--------CCCCCccEEEccCCccCccCCccccCC---CCCCEEEccCCcccccCC
Q 037042 372 NLSHSLKIFDMSDCNVSGSIPEEI--------GNLTNLIGFYLGGNNLNGSIPITLGKL---QKLQVLYFPDNKLEGSIP 440 (1002)
Q Consensus 372 ~~~~~L~~L~L~~N~l~~~~p~~~--------~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p 440 (1002)
-...+|+.|++++|.+.+..+..+ ..+++|++|++++|++++..|..+... ++|+.|++++|.+.+..
T Consensus 177 l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~- 255 (455)
T 3v47_A 177 FQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS- 255 (455)
T ss_dssp GTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC-
T ss_pred cccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc-
Confidence 112356666666666665444332 234555555555555555555444332 45555555555443221
Q ss_pred ccccCCccccEEEccCCcCCccCCccccCC--ccCcccccccccccccCCccccccccCceeeccCCCCCCCCccccccc
Q 037042 441 DEVCRLAKVYQLDLSNNKLSGSIPACFGDL--ASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNL 518 (1002)
Q Consensus 441 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 518 (1002)
+..+.+.+..+..+..+ ++|+.|++++|++.+..|..|.++++|++|++++|++++..|..|.++
T Consensus 256 -------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 322 (455)
T 3v47_A 256 -------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGL 322 (455)
T ss_dssp -------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred -------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCc
Confidence 11222232333334333 689999999999999999999999999999999999998888899999
Q ss_pred ccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeC
Q 037042 519 KVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNL 598 (1002)
Q Consensus 519 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 598 (1002)
++|+.|+|++|.+++..|..|+++++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..+..+++|+.|+|
T Consensus 323 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 402 (455)
T 3v47_A 323 THLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWL 402 (455)
T ss_dssp TTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEc
Confidence 99999999999999999999999999999999999999988999999999999999999999877778899999999999
Q ss_pred CCCcCcccCCCCCC
Q 037042 599 SFNKLEGEIPKGGS 612 (1002)
Q Consensus 599 s~N~l~~~~p~~~~ 612 (1002)
++|+++|.+|....
T Consensus 403 ~~N~l~~~~~~~~~ 416 (455)
T 3v47_A 403 HTNPWDCSCPRIDY 416 (455)
T ss_dssp CSSCBCCCTTTTHH
T ss_pred cCCCcccCCCcchH
Confidence 99999999996543
No 48
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.5e-43 Score=415.40 Aligned_cols=252 Identities=20% Similarity=0.258 Sum_probs=202.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHH---HHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDV---ECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.++|++.++||+|+||+||+|+.. +|+.||||++++.. ......+.+ ++.+++.++|||||++++++.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~-- 265 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-- 265 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--
Confidence 367999999999999999999855 69999999997532 112233333 456677789999999999998877
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
..|+|||||+||+|.+++...+ .+++..++.++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|
T Consensus 266 --~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA 339 (689)
T 3v5w_A 266 --KLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA 339 (689)
T ss_dssp --EEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred --EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEeccccee
Confidence 6789999999999999998765 4899999999999999999999 999999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
+.+.... ....+||+.|||||++.. ..|+.++||||+||++|||++|+.||....... ...... .
T Consensus 340 ~~~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~~--------~ 405 (689)
T 3v5w_A 340 CDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDR--------M 405 (689)
T ss_dssp EECSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHHH--------H
T ss_pred eecCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHH--------h
Confidence 8775432 235689999999999864 579999999999999999999999997643221 111111 1
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-----HHHHHHHHH
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-----AKEIVTRLL 986 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~evl~~L~ 986 (1002)
+....... +...+..+.+++.+||+.||.+|++ ++||.+|-+
T Consensus 406 i~~~~~~~--------p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hpf 452 (689)
T 3v5w_A 406 TLTMAVEL--------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 452 (689)
T ss_dssp HHHCCCCC--------CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGG
T ss_pred hcCCCCCC--------CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCcc
Confidence 11111111 1123466889999999999999998 799998744
No 49
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.4e-42 Score=386.19 Aligned_cols=281 Identities=31% Similarity=0.514 Sum_probs=230.0
Q ss_pred HHHHHHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 698 YLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 698 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
+.++...+++|+..+.||+|+||+||+|+..+|+.||||++........+.+.+|++++++++||||+++++++...+
T Consensus 31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 108 (321)
T 2qkw_B 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN-- 108 (321)
T ss_dssp CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT--
T ss_pred HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC--
Confidence 334445678999999999999999999998889999999988766666788999999999999999999999997765
Q ss_pred hHHHHHhhccCCCCChhHhhhccC---CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSN---YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
..++||||+++|+|.+++.... ..+++..++.++.||++||+||| +++|+||||||+||+++.++.+||+||
T Consensus 109 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 109 --EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp --CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCC
T ss_pred --eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeec
Confidence 5679999999999999997654 25899999999999999999999 899999999999999999999999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccc-cccHHHHHHHHHhh-
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNE-GMTLKHWVNDWLLI- 932 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~-~~~~~~~~~~~~~~- 932 (1002)
|+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......|.......
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence 9998755433322334456899999999988889999999999999999999999999765443 23344444332222
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
.+..+.++..... .+..++..+.+++.+||+.+|++|||+.|++++|+.+...
T Consensus 264 ~~~~~~~~~~~~~------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 264 QLEQIVDPNLADK------IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CCCSSSSSSCTTC------SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cHHHhcChhhccc------cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 2334444332211 2345678899999999999999999999999999988654
No 50
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=9.3e-43 Score=387.57 Aligned_cols=280 Identities=23% Similarity=0.269 Sum_probs=214.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..++||+|+||+||+|+.. ++.||||++.... ......++|+.++++++||||+++++++..........++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467999999999999999999876 7999999997543 33455667999999999999999999998755222234799
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCC----------CcEEccCCCCCeeeCCCCcEEEecc
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST----------PVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~----------~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
|||+++|+|.+++.... +++..+..++.|+++||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 99999999999997653 899999999999999999999 77 9999999999999999999999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCC-----CCcCcccchHHHHHHHHHHHhCCCCCcccccccccH-HHHHHH
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSE-----GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTL-KHWVND 928 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~-~~~~~~ 928 (1002)
|+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... ......
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 99987765544333445679999999998876 356788999999999999999999997654332211 110000
Q ss_pred H-HhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 929 W-LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 929 ~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
. ....+.....................++..+.+++.+||+.||++|||+.|+++.|++++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 256 HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0 00001111111111111111122335667899999999999999999999999999998753
No 51
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.1e-41 Score=392.04 Aligned_cols=364 Identities=16% Similarity=0.147 Sum_probs=242.4
Q ss_pred ccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCcc
Q 037042 66 SGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSA 145 (1002)
Q Consensus 66 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 145 (1002)
.+..+..++++++|++|+|++|.+++ +| .++.+++|++|+|++|++++ +| ++.+++|++|+|++|+|++. |
T Consensus 31 ~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~---~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 31 QATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD---LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp CTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC---CTTCTTCSEEECCSSCCSCC-C--
T ss_pred CcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec---cccCCCCCEEECcCCCCcee-e--
Confidence 34445566677777777777777774 34 56777777777777777764 34 45677777777777777753 3
Q ss_pred ccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCcccc
Q 037042 146 LSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNL 225 (1002)
Q Consensus 146 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L 225 (1002)
++++++|++|+|++|++++ +| ++.+++|++|++++|++++ +| ++.+++|
T Consensus 102 ~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~--------------------------l~--l~~l~~L 150 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE--------------------------ID--VSHNTQL 150 (457)
T ss_dssp CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC--------------------------CC--CTTCTTC
T ss_pred cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce--------------------------ec--cccCCcC
Confidence 6777777777777777764 33 6777777777777777763 22 4566777
Q ss_pred ceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCC
Q 037042 226 EVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQK 305 (1002)
Q Consensus 226 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 305 (1002)
++|++++|+..+.+ .+..+++|+.|++++|++++ + ++..+++|++|++++|++++. .+..+++|++|+|++
T Consensus 151 ~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l---~l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~ 221 (457)
T 3bz5_A 151 TELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-L---DVSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSS 221 (457)
T ss_dssp CEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-C---CCTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCS
T ss_pred CEEECCCCCccccc--ccccCCcCCEEECCCCccce-e---ccccCCCCCEEECcCCcCCee---ccccCCCCCEEECcC
Confidence 77777777544444 35666777777777777664 2 355677777777777777754 266778888888888
Q ss_pred CccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCC
Q 037042 306 NSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDC 385 (1002)
Q Consensus 306 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N 385 (1002)
|+++++ | ++.+++|+.|++++|+++.++ +..+++|+.|+++.|++ +.|++++|
T Consensus 222 N~l~~i-p--~~~l~~L~~L~l~~N~l~~~~--------~~~l~~L~~L~l~~n~L----------------~~L~l~~n 274 (457)
T 3bz5_A 222 NKLTEI-D--VTPLTQLTYFDCSVNPLTELD--------VSTLSKLTTLHCIQTDL----------------LEIDLTHN 274 (457)
T ss_dssp SCCSCC-C--CTTCTTCSEEECCSSCCSCCC--------CTTCTTCCEEECTTCCC----------------SCCCCTTC
T ss_pred Cccccc-C--ccccCCCCEEEeeCCcCCCcC--------HHHCCCCCEEeccCCCC----------------CEEECCCC
Confidence 888873 4 777888888888888887765 34567788888777643 45677777
Q ss_pred CCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCc
Q 037042 386 NVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPA 465 (1002)
Q Consensus 386 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 465 (1002)
.+.+.+| ++.+++|+.|++++|.+.+.+|. ..++|+.|++++| ++|+.|+|++|++++. +
T Consensus 275 ~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~- 334 (457)
T 3bz5_A 275 TQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D- 334 (457)
T ss_dssp TTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C-
T ss_pred ccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c-
Confidence 7777666 46677788888888877666664 3345555555544 4667777777777763 2
Q ss_pred cccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccc
Q 037042 466 CFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAI 539 (1002)
Q Consensus 466 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 539 (1002)
++.+++|+.|++++|+++++ +.|..|++++|.+.|. +.+..|..+++++|+++|.+|..+
T Consensus 335 -l~~l~~L~~L~l~~N~l~~l--------~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~ 394 (457)
T 3bz5_A 335 -VSHNTKLKSLSCVNAHIQDF--------SSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDL 394 (457)
T ss_dssp -CTTCTTCSEEECCSSCCCBC--------TTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTC
T ss_pred -cccCCcCcEEECCCCCCCCc--------cccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhH
Confidence 66667777777777766652 3455566666666653 244556666667776666666544
No 52
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.2e-42 Score=382.68 Aligned_cols=287 Identities=34% Similarity=0.521 Sum_probs=230.4
Q ss_pred cccccCHHHHHHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeE
Q 037042 692 TWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISC 770 (1002)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~ 770 (1002)
...++++.++....++|+..+.||+|+||+||+|+..+|+.||||++..... .....+.+|++++++++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 4567888999999999999999999999999999988899999999875432 223468899999999999999999999
Q ss_pred EecCchhhHHHHHhhccCCCCChhHhhhccCC---cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC
Q 037042 771 CSIGDFKALFKALALEYMPHGSLEKYLYSSNY---ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM 847 (1002)
Q Consensus 771 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~ 847 (1002)
+...+ ..++||||+++|+|.+++..... .+++..+..++.|++.||+|||..+..+|+||||||+||+++.++
T Consensus 96 ~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~ 171 (326)
T 3uim_A 96 CMTPT----ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF 171 (326)
T ss_dssp ECCSS----CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTC
T ss_pred EecCC----ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCC
Confidence 98766 45799999999999999986543 489999999999999999999943333999999999999999999
Q ss_pred cEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccc---cccccHHH
Q 037042 848 VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIF---NEGMTLKH 924 (1002)
Q Consensus 848 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~---~~~~~~~~ 924 (1002)
.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ........
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 250 (326)
T 3uim_A 172 EAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 250 (326)
T ss_dssp CEEECCCSSCEECCSSSSC-EECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHH
T ss_pred CEEeccCccccccCccccc-ccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHH
Confidence 9999999999876543332 2344569999999999988889999999999999999999999997432 22333444
Q ss_pred HHHHHHhhh-hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 925 WVNDWLLIS-IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 925 ~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
|+....... ...+.+..... ..+..++..+.+++.+||+.+|++|||+.|++++|+...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 251 WVKGLLKEKKLEALVDVDLQG------NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp HHTTTTSSCCSTTSSCTTCTT------SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred HHHHHhhchhhhhhcChhhcc------ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 443322221 22333322211 123456788999999999999999999999999998754
No 53
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.9e-42 Score=379.94 Aligned_cols=267 Identities=22% Similarity=0.318 Sum_probs=217.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||+||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++...+ ..++
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~l 84 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK----RLNF 84 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT----EEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC----eeEE
Confidence 357889999999999999999865 68999999987766667788999999999999999999999998766 4579
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||+++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 85 ITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp EEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred EEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 99999999999999886667999999999999999999999 899999999999999999999999999999876543
Q ss_pred Ccee------------eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh
Q 037042 864 DQFV------------TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL 931 (1002)
Q Consensus 864 ~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 931 (1002)
.... ......||+.|+|||++.+..++.++|||||||++|||++|..|+..............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~----- 236 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV----- 236 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCH-----
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhh-----
Confidence 2211 11145799999999999999999999999999999999999999876433221110000
Q ss_pred hhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCC
Q 037042 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGY 996 (1002)
Q Consensus 932 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~ 996 (1002)
........+..++..+.+++.+||+.+|++|||+.|+++.|++++.......
T Consensus 237 -------------~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~~~ 288 (310)
T 3s95_A 237 -------------RGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHL 288 (310)
T ss_dssp -------------HHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHCC
T ss_pred -------------hccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccCcc
Confidence 0000111123345678899999999999999999999999999986544433
No 54
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.7e-41 Score=372.70 Aligned_cols=253 Identities=26% Similarity=0.325 Sum_probs=209.1
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||+||+|+. .+|+.||||++........+.+.+|+.++++++||||+++++++..++ ..++
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~l 94 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD----ELWV 94 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----EEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECC----EEEE
Confidence 35799999999999999999985 579999999998665556678899999999999999999999998776 4579
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||+++|+|.+++... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 95 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 95 VMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp EEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 99999999999999765 4899999999999999999999 899999999999999999999999999999876544
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ . ... .........
T Consensus 170 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~-~~~-----~~~~~~~~~ 237 (297)
T 3fxz_A 170 QS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA----L-YLI-----ATNGTPELQ 237 (297)
T ss_dssp TC--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----H-HHH-----HHHCSCCCS
T ss_pred cc--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----H-HHH-----HhCCCCCCC
Confidence 32 22456799999999999999999999999999999999999999976322111 0 000 000000111
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+..++..+.+++.+||+.||++|||++|+++|-+
T Consensus 238 --------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~ 272 (297)
T 3fxz_A 238 --------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQF 272 (297)
T ss_dssp --------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGG
T ss_pred --------CccccCHHHHHHHHHHccCChhHCcCHHHHhhChh
Confidence 12234567899999999999999999999998744
No 55
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.3e-40 Score=364.77 Aligned_cols=282 Identities=29% Similarity=0.453 Sum_probs=227.7
Q ss_pred cccccCHHHHHHhhcCCCCC------ceeeccCcceEEEEEeCCCcEEEEEEeecc----cchhHHHHHHHHHHHHhccC
Q 037042 692 TWRRFSYLELCQATDGFSEN------NLIGRGGFGSVYKARIQDGMEVAVKVFNQQ----CGRAFKSFDVECEVMKSIRH 761 (1002)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h 761 (1002)
....|++.++..++.+|... +.||+|+||+||+|+. +++.||||++... .....+.+.+|++++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34678899999999998877 8999999999999986 5889999998643 23346788999999999999
Q ss_pred CCcceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccC--CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCC
Q 037042 762 RNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSN--YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839 (1002)
Q Consensus 762 ~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~ 839 (1002)
|||+++++++...+ ..++||||+++|+|.+++.... ..+++..+..++.||++||+||| +.+|+||||||+
T Consensus 90 ~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~ 162 (307)
T 2nru_A 90 ENLVELLGFSSDGD----DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSA 162 (307)
T ss_dssp TTBCCEEEEECSSS----SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGG
T ss_pred CCeEEEEEEEecCC----ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHH
Confidence 99999999998766 5679999999999999987532 35899999999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccccc
Q 037042 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG 919 (1002)
Q Consensus 840 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~ 919 (1002)
||+++.++.+||+|||+++...............||+.|+|||+..+ .++.++|||||||++|||++|+.||......
T Consensus 163 Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~- 240 (307)
T 2nru_A 163 NILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP- 240 (307)
T ss_dssp GEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS-
T ss_pred HEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch-
Confidence 99999999999999999987665443333345679999999998765 5899999999999999999999999765433
Q ss_pred ccHHHHHHHHHhh--hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 920 MTLKHWVNDWLLI--SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 920 ~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
.....+....... .+....+..... .+..++..+.+++.+||+.+|.+|||+.|++++|++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 241 QLLLDIKEEIEDEEKTIEDYIDKKMND-------ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp SBTTHHHHHHHTTSCCHHHHSCSSCSC-------CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHHHHHhhhhhhhhhhhccccccc-------cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 2233333322221 122333322211 123456789999999999999999999999999999864
No 56
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.9e-40 Score=383.94 Aligned_cols=371 Identities=20% Similarity=0.202 Sum_probs=239.0
Q ss_pred EEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEccccc
Q 037042 82 LFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYND 161 (1002)
Q Consensus 82 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 161 (1002)
.......+.+..+.+++++++|++|+|++|.+++ +| . +..+++|++|+|++|++++. | ++++++|++|+|++|+
T Consensus 23 ~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~-l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~ 96 (457)
T 3bz5_A 23 EVAAAFEMQATDTISEEQLATLTSLDCHNSSITD-MT-G-IEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNK 96 (457)
T ss_dssp HHHHHTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-T-GGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSC
T ss_pred HHHHhcCcCcccccChhHcCCCCEEEccCCCccc-Ch-h-hcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCC
Confidence 3334455666667788888888888888888885 45 2 46688888888888888853 4 7788888888888888
Q ss_pred CCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCccccccccc
Q 037042 162 FAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPA 241 (1002)
Q Consensus 162 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 241 (1002)
+++. | ++++++|++|+|++|++++ +| ++.+++|++|++++|++++. +
T Consensus 97 l~~~-~--~~~l~~L~~L~L~~N~l~~--------------------------l~--~~~l~~L~~L~l~~N~l~~l-~- 143 (457)
T 3bz5_A 97 LTNL-D--VTPLTKLTYLNCDTNKLTK--------------------------LD--VSQNPLLTYLNCARNTLTEI-D- 143 (457)
T ss_dssp CSCC-C--CTTCTTCCEEECCSSCCSC--------------------------CC--CTTCTTCCEEECTTSCCSCC-C-
T ss_pred Ccee-e--cCCCCcCCEEECCCCcCCe--------------------------ec--CCCCCcCCEEECCCCcccee-c-
Confidence 8753 3 7788888888888888763 33 66777788888888877763 2
Q ss_pred ccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccc
Q 037042 242 EIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRN 321 (1002)
Q Consensus 242 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 321 (1002)
+..+++|++|++++|+..+ .+ .+..+++|++|++++|+++++ | ++.+++
T Consensus 144 -l~~l~~L~~L~l~~n~~~~-------------------------~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~ 192 (457)
T 3bz5_A 144 -VSHNTQLTELDCHLNKKIT-------------------------KL--DVTPQTQLTTLDCSFNKITEL-D--VSQNKL 192 (457)
T ss_dssp -CTTCTTCCEEECTTCSCCC-------------------------CC--CCTTCTTCCEEECCSSCCCCC-C--CTTCTT
T ss_pred -cccCCcCCEEECCCCCccc-------------------------cc--ccccCCcCCEEECCCCcccee-c--cccCCC
Confidence 5555566666666554332 22 234445555555555555543 2 555555
Q ss_pred cchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCc
Q 037042 322 LKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNL 401 (1002)
Q Consensus 322 L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 401 (1002)
|+.|++++|+++.++ +..+++|++|++++|+++++ | ++.+++|
T Consensus 193 L~~L~l~~N~l~~~~--------l~~l~~L~~L~Ls~N~l~~i---------------------------p--~~~l~~L 235 (457)
T 3bz5_A 193 LNRLNCDTNNITKLD--------LNQNIQLTFLDCSSNKLTEI---------------------------D--VTPLTQL 235 (457)
T ss_dssp CCEEECCSSCCSCCC--------CTTCTTCSEEECCSSCCSCC---------------------------C--CTTCTTC
T ss_pred CCEEECcCCcCCeec--------cccCCCCCEEECcCCccccc---------------------------C--ccccCCC
Confidence 666666666655542 44555555555555555432 2 3445555
Q ss_pred cEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccc
Q 037042 402 IGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASN 481 (1002)
Q Consensus 402 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 481 (1002)
+.|++++|++++.. +..+++|+.|++++|+ |+.|++++|.+.+.+| ++.+++|+.|++++|
T Consensus 236 ~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n 296 (457)
T 3bz5_A 236 TYFDCSVNPLTELD---VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHN 296 (457)
T ss_dssp SEEECCSSCCSCCC---CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTC
T ss_pred CEEEeeCCcCCCcC---HHHCCCCCEEeccCCC--------------CCEEECCCCccCCccc--ccccccCCEEECCCC
Confidence 55555555555432 3345556666665543 3445666666665555 456677777777777
Q ss_pred cccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCc
Q 037042 482 ELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPD 561 (1002)
Q Consensus 482 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 561 (1002)
.+.+.+|. ...+|+.|++++| ++|+.|++++|+|++. + ++++++|+.|++++|+|++
T Consensus 297 ~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~---- 353 (457)
T 3bz5_A 297 TQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD---- 353 (457)
T ss_dssp TTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB----
T ss_pred cccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC----
Confidence 66655553 2344555555544 5677778888888774 2 7778888888888888875
Q ss_pred ccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCCC
Q 037042 562 SFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG 610 (1002)
Q Consensus 562 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 610 (1002)
++.|..|++++|+++|. ..+..|..++|++|+++|.||..
T Consensus 354 ----l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 354 ----FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp ----CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred ----ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 24566777888888765 24556777888888888888864
No 57
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.7e-41 Score=382.62 Aligned_cols=261 Identities=28% Similarity=0.460 Sum_probs=212.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC--------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecC
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ--------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIG 774 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 774 (1002)
.++|+..+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 357889999999999999999752 35679999997653 33457789999999999 899999999999876
Q ss_pred chhhHHHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCC
Q 037042 775 DFKALFKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839 (1002)
Q Consensus 775 ~~~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~ 839 (1002)
+ ..++||||+++|+|.+++...+ ..+++..++.++.||++||+||| +++|+||||||+
T Consensus 160 ~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~ 232 (370)
T 2psq_A 160 G----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAAR 232 (370)
T ss_dssp S----SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGG
T ss_pred C----CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchh
Confidence 6 5679999999999999997653 24789999999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccc
Q 037042 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNE 918 (1002)
Q Consensus 840 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~ 918 (1002)
|||++.++.+||+|||+++...............+|+.|+|||++.+..|+.++|||||||++|||++ |+.||......
T Consensus 233 NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~ 312 (370)
T 2psq_A 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 312 (370)
T ss_dssp GEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred hEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 99999999999999999987665443333344567889999999988899999999999999999999 99999764222
Q ss_pred cccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 919 GMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
. .... +..+.... .+..++..+.+++.+||+.+|++||++.|++++|+++....
T Consensus 313 ~--~~~~-----------~~~~~~~~-------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 313 E--LFKL-----------LKEGHRMD-------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp G--HHHH-----------HHTTCCCC-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred H--HHHH-----------HhcCCCCC-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 1 1110 11110000 11234567899999999999999999999999999986543
No 58
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.1e-41 Score=375.12 Aligned_cols=250 Identities=23% Similarity=0.306 Sum_probs=207.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||.||+|+. .+|+.||||++.+.. ....+.+.+|+++++.++||||+++++++...+ ..
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----~~ 89 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK----TL 89 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----EE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC----EE
Confidence 46799999999999999999986 579999999997542 334567889999999999999999999998766 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++...+ .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 90 YLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp EEEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EEEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 79999999999999997765 4899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... ....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... ...... +..+
T Consensus 166 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~--------i~~~ 229 (328)
T 3fe3_A 166 VGGK---LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-----KELRER--------VLRG 229 (328)
T ss_dssp SSCG---GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH--------HHHC
T ss_pred CCCc---cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-----HHHHHH--------HHhC
Confidence 4432 245679999999999888776 4899999999999999999999976321 111111 1111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....+ ...+..+.+++.+||..||.+|||++|+++|-+
T Consensus 230 ~~~~p--------~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~ 267 (328)
T 3fe3_A 230 KYRIP--------FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRW 267 (328)
T ss_dssp CCCCC--------TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTT
T ss_pred CCCCC--------CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHh
Confidence 11111 123456889999999999999999999999855
No 59
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=8.1e-41 Score=368.50 Aligned_cols=270 Identities=24% Similarity=0.340 Sum_probs=208.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHh--ccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKS--IRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+. +++.||||++... ....+..|.+++.. ++||||+++++++..........+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46799999999999999999987 5899999998754 23455666777666 799999999998765432223457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCC-----CCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY-----STPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
+||||+++|+|.++++.. .+++..+..++.||++||+|||... +++|+||||||+||+++.++.+||+|||++
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999999654 4899999999999999999999322 678999999999999999999999999999
Q ss_pred ccccCCCceee--eccCCCCcccccccccCCC------CcCcccchHHHHHHHHHHHhC----------CCCCccccccc
Q 037042 858 KLLTREDQFVT--QTQTPATIGYMALEYGSEG------RVSTNGDVYNFGVMLMETFTG----------KKPTNEIFNEG 919 (1002)
Q Consensus 858 ~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~elltg----------~~P~~~~~~~~ 919 (1002)
+.......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 87655433221 2344799999999998776 566899999999999999999 88887654444
Q ss_pred ccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 920 MTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
............. . ..........+..++..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 241 ~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 301 (301)
T 3q4u_A 241 PSFEDMRKVVCVD-------Q--QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 301 (301)
T ss_dssp CCHHHHHHHHTTS-------C--CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHC
T ss_pred cchhhhhHHHhcc-------C--CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhccC
Confidence 3333222211100 0 00111111223456788999999999999999999999999999873
No 60
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.5e-41 Score=371.21 Aligned_cols=263 Identities=26% Similarity=0.348 Sum_probs=201.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
..+|++.+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~ 110 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP----NLS 110 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT----CCE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC----ceE
Confidence 45788999999999999999987 48899999987543 334567889999999999999999999998766 467
Q ss_pred HhhccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCC--cEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTP--VIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
+||||+++|+|.+++..... .+++..++.++.||++||+||| +.+ |+||||||+||+++.++.+||+|||+++
T Consensus 111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp EEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred EEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 99999999999999987543 4899999999999999999999 888 9999999999999999999999999997
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +....... .
T Consensus 188 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-----~~~~~~~~------~ 254 (309)
T 3p86_A 188 LKASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-----QVVAAVGF------K 254 (309)
T ss_dssp ----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-----HHHHHHHH------S
T ss_pred cccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHh------c
Confidence 654322 1224457899999999999999999999999999999999999999764221 11111000 0
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCC
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGY 996 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~ 996 (1002)
..... .+..++..+.+++.+||+.+|++|||+.|+++.|+.+.+...++.
T Consensus 255 ~~~~~--------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~ 304 (309)
T 3p86_A 255 CKRLE--------IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304 (309)
T ss_dssp CCCCC--------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC------
T ss_pred CCCCC--------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCC
Confidence 00000 112244678899999999999999999999999999876554443
No 61
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.7e-41 Score=364.50 Aligned_cols=259 Identities=26% Similarity=0.401 Sum_probs=213.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|+..++..||||++..... ..+.+.+|++++++++||||+++++++.... ..++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 81 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY----PIYIV 81 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----SEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC----ceEEE
Confidence 457899999999999999999998888999999976532 3467899999999999999999999997766 45799
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++++|.+++......+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 158 (268)
T 3sxs_A 82 TEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158 (268)
T ss_dssp EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred EEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence 9999999999999887667999999999999999999999 8999999999999999999999999999998765543
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
. .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||....... .... +......
T Consensus 159 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~--------~~~~~~~ 224 (268)
T 3sxs_A 159 Y-VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE-----VVLK--------VSQGHRL 224 (268)
T ss_dssp E-EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----HHHH--------HHTTCCC
T ss_pred h-hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH-----HHHH--------HHcCCCC
Confidence 3 23345567888999999988889999999999999999999 999997532211 1111 1111000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
.. +..++..+.+++.+||+.+|++|||+.|++++|+++++.+
T Consensus 225 ~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 225 YR-------PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp CC-------CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred CC-------CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 00 1112456889999999999999999999999999998643
No 62
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=8.9e-42 Score=388.06 Aligned_cols=259 Identities=27% Similarity=0.439 Sum_probs=211.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|++. +++.||||+++... ......+.+|++++++++||||+++++++...+ ..+
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~~ 188 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ----PIY 188 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS----SCE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC----CcE
Confidence 457888999999999999999976 78999999987543 233456889999999999999999999998766 467
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++|+|.+++...+..+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 189 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 189 IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 999999999999999876667899999999999999999999 89999999999999999999999999999986544
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
...........+|..|+|||++.++.++.++|||||||++|||++ |+.||....... .... +..+.
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~--~~~~-----------~~~~~ 332 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ--TREF-----------VEKGG 332 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH--HHHH-----------HHTTC
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH-----------HHcCC
Confidence 322211122345778999999988899999999999999999998 999987642211 1110 00000
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
.. ..+..++..+.++|.+||+.+|++|||+.++++.|+++++
T Consensus 333 ~~-------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 333 RL-------PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC-------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 00 0122345678999999999999999999999999999875
No 63
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=5.8e-41 Score=373.35 Aligned_cols=262 Identities=26% Similarity=0.426 Sum_probs=210.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeecc-cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|++.+.||+|+||+||+|+.. .+..||||+++.. .....+.+.+|++++++++||||+++++++..++ .
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~ 124 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR----L 124 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG----C
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC----c
Confidence 56888899999999999999864 3556999999765 3345577899999999999999999999997665 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred cEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 67999999999999999877667999999999999999999999 899999999999999999999999999999877
Q ss_pred cCCCc-eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 861 TREDQ-FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 861 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
..... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ..... +.
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~--------~~ 268 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-----DVISS--------VE 268 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HHHHH--------HH
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHH--------HH
Confidence 54322 222334456888999999988899999999999999999999 99999664221 11111 11
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
...... .+..++..+.+++.+||..+|++|||+.|+++.|+++......
T Consensus 269 ~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 269 EGYRLP-------APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp TTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred cCCCCC-------CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 110000 1123456789999999999999999999999999998765443
No 64
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6e-41 Score=374.79 Aligned_cols=256 Identities=23% Similarity=0.339 Sum_probs=200.1
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
..++|+..+.||+|+||+||+|+. .+|+.||||++.+.. ......+.+|++++++++||||+++++++...+ ..
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~----~~ 83 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN----KI 83 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSS----EE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC----EE
Confidence 356899999999999999999985 579999999997653 233456889999999999999999999998776 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 84 ~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 159 (347)
T 3zgw_A 84 FMVLEYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159 (347)
T ss_dssp EEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred EEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence 79999999999999997655 4899999999999999999999 8999999999999999999999999999998655
Q ss_pred CCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... .....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... ..... ++..+
T Consensus 160 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-----~~~~~--------~i~~~ 225 (347)
T 3zgw_A 160 GNKDY-HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV-----MALYK--------KIMRG 225 (347)
T ss_dssp -------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH--------HHHHT
T ss_pred CCCCc-cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH-----HHHHH--------HHHcC
Confidence 43221 2244579999999999888775 8999999999999999999999975321 11111 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
....+ ...+..+.+++.+||+.||++|||++|+++|-+-..
T Consensus 226 ~~~~p--------~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~ 266 (347)
T 3zgw_A 226 KYDVP--------KWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266 (347)
T ss_dssp CCCCC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHT
T ss_pred CCCCC--------CCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhc
Confidence 11111 113456788999999999999999999999977444
No 65
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.6e-40 Score=369.14 Aligned_cols=265 Identities=22% Similarity=0.276 Sum_probs=214.4
Q ss_pred cccCHHHHHHhhcC----------CCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCC
Q 037042 694 RRFSYLELCQATDG----------FSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHR 762 (1002)
Q Consensus 694 ~~~~~~~~~~~~~~----------~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 762 (1002)
..++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34666776666653 666789999999999999866 7999999999876666677889999999999999
Q ss_pred CcceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCee
Q 037042 763 NIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVL 842 (1002)
Q Consensus 763 niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NIL 842 (1002)
||+++++++...+ ..++||||+++|+|.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+
T Consensus 103 niv~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIl 173 (321)
T 2c30_A 103 NVVEMYKSYLVGE----ELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSIL 173 (321)
T ss_dssp TBCCEEEEEEETT----EEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEE
T ss_pred CcceEEEEEEECC----EEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEE
Confidence 9999999998766 467999999999999998754 4899999999999999999999 899999999999999
Q ss_pred eCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccH
Q 037042 843 LGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTL 922 (1002)
Q Consensus 843 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~ 922 (1002)
++.++.+||+|||++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 174 l~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~---- 247 (321)
T 2c30_A 174 LTLDGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV---- 247 (321)
T ss_dssp ECTTCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----
T ss_pred ECCCCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----
Confidence 99999999999999987654322 224557999999999999999999999999999999999999999753211
Q ss_pred HHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 923 KHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 923 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
..... +.....+.... ....+..+.+++.+||+.+|++|||+.|+++|-+-
T Consensus 248 -~~~~~-----~~~~~~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~ 298 (321)
T 2c30_A 248 -QAMKR-----LRDSPPPKLKN--------SHKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298 (321)
T ss_dssp -HHHHH-----HHHSSCCCCTT--------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred -HHHHH-----HhcCCCCCcCc--------cccCCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 11111 11111111110 11234568899999999999999999999998653
No 66
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.9e-41 Score=363.76 Aligned_cols=258 Identities=29% Similarity=0.436 Sum_probs=213.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|+..+++.||+|++..... ..+.+.+|++++++++||||+++++++.... ..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 83 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA----PICLV 83 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----SEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC----ceEEE
Confidence 356888999999999999999988899999999976533 3467899999999999999999999998766 45799
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++|+|.+++......+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 160 (269)
T 4hcu_A 84 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 160 (269)
T ss_dssp EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred EEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccc
Confidence 9999999999999877767999999999999999999999 8999999999999999999999999999998665432
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
. .......+|..|+|||++.+..++.++||||+||++|||++ |+.||...... ..... +......
T Consensus 161 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-----~~~~~--------~~~~~~~ 226 (269)
T 4hcu_A 161 Y-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVED--------ISTGFRL 226 (269)
T ss_dssp H-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHH--------HHTTCCC
T ss_pred c-ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHH--------HhcCccC
Confidence 1 12244567888999999988899999999999999999999 99998763221 11111 1111000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
. .+...+..+.+++.+||+.+|++|||+.|++++|+++.+.
T Consensus 227 ~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 227 Y-------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp C-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C-------CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 0 0112345688999999999999999999999999998764
No 67
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-40 Score=369.93 Aligned_cols=255 Identities=19% Similarity=0.265 Sum_probs=210.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||+||+|+.. +++.||+|++.... .....+.+|+++++.++||||+++++++...+ ..++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~----~~~l 78 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESME----ELVM 78 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT----EEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC----EEEE
Confidence 467999999999999999999865 68999999987543 34567889999999999999999999998766 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC--CCcEEEeccccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD--NMVAHLSDFGITKLLT 861 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~--~~~~kl~DfGla~~~~ 861 (1002)
||||+++|+|.+++......+++..+..++.||++||+||| +.+|+||||||+||+++. ++.+||+|||+++...
T Consensus 79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 79 IFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp EECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred EEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 99999999999999877667999999999999999999999 899999999999999987 7999999999998876
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
..... ....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+....
T Consensus 156 ~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~--------~i~~~~ 219 (321)
T 1tki_A 156 PGDNF---RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-----QIIE--------NIMNAE 219 (321)
T ss_dssp TTCEE---EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH--------HHHHTC
T ss_pred CCCcc---ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-----HHHH--------HHHcCC
Confidence 54432 3346899999999999888999999999999999999999999763221 1111 111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
..... .....++..+.+++.+||..||++|||+.|+++|-+-
T Consensus 220 ~~~~~----~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~ 261 (321)
T 1tki_A 220 YTFDE----EAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWL 261 (321)
T ss_dssp CCCCH----HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHH
T ss_pred CCCCh----hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhh
Confidence 11111 0112345678999999999999999999999998663
No 68
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.2e-40 Score=372.67 Aligned_cols=254 Identities=21% Similarity=0.282 Sum_probs=207.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccch------hHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGR------AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.+.|++.+.||+|+||+||+|+.. +|+.||+|++.+.... ..+.+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-- 88 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT-- 88 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--
Confidence 467999999999999999999865 6999999999764321 3577899999999999999999999998766
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC----cEEEec
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM----VAHLSD 853 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~----~~kl~D 853 (1002)
..++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|
T Consensus 89 --~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 89 --DVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp --EEEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred --EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 5689999999999999997654 5899999999999999999999 89999999999999998776 799999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
||+++....... .....||+.|+|||++.+..|+.++||||+||++|||++|+.||...... +..
T Consensus 163 FG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~-----~~~------- 227 (361)
T 2yab_A 163 FGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-----ETL------- 227 (361)
T ss_dssp CSSCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHH-------
T ss_pred cCCceEcCCCCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-----HHH-------
Confidence 999987765332 24457999999999999989999999999999999999999999763221 111
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+......... ......+..+.+++.+||..||++|||+.|+++|-+
T Consensus 228 -~~i~~~~~~~~~----~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 275 (361)
T 2yab_A 228 -ANITAVSYDFDE----EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275 (361)
T ss_dssp -HHHHTTCCCCCH----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred -HHHHhcCCCCCc----hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcC
Confidence 111111111111 111234567899999999999999999999998744
No 69
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.9e-40 Score=364.31 Aligned_cols=273 Identities=26% Similarity=0.416 Sum_probs=210.8
Q ss_pred hcCCCCCceeeccCcceEEEEEe-----CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-----QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|+..+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+..
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-- 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR-- 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT--
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC--
Confidence 35788999999999999999984 26889999999877666678899999999999999999999998653311
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++...+..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred ceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 346999999999999999887667999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCce-eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc------cHHHHHHHHHhh
Q 037042 860 LTREDQF-VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM------TLKHWVNDWLLI 932 (1002)
Q Consensus 860 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~------~~~~~~~~~~~~ 932 (1002)
....... .......+|..|+|||++.+..++.++|||||||++|||++|..|+.....+.. ........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF---- 239 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHH----
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHH----
Confidence 6543322 122344577889999999888999999999999999999999999876432100 00000000
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
...+....... ...+..++..+.+++.+||+.+|++|||+.|++++|+++.+..
T Consensus 240 ~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 240 HLIELLKNNGR------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHHHHTTCC------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHhccCc------CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 00000000000 0012235677999999999999999999999999999997653
No 70
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.2e-40 Score=365.53 Aligned_cols=264 Identities=24% Similarity=0.386 Sum_probs=206.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+.. ..+|+|+++.. .....+.+.+|++++++++||||+++++++..+. .+
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 107 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN-----LA 107 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS-----CE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCc-----EE
Confidence 467999999999999999999865 36899988743 2334578899999999999999999999886543 46
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++|+|.+++......+++.++..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 108 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred EEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 999999999999999877777999999999999999999999 88999999999999999999999999999986543
Q ss_pred CCceeeeccCCCCcccccccccC---CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGS---EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...........||+.|+|||++. +..++.++|||||||++|||++|+.||........ ....+. . ....
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~~~~~---~----~~~~ 256 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVG---R----GYAS 256 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHH---H----TCCC
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH-HHHHHh---c----CCCC
Confidence 33222334567999999999875 56789999999999999999999999976432211 110000 0 0000
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
+.... ....++..+.+++.+||+.+|++||++.|++++|+.+....+
T Consensus 257 ~~~~~-------~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 257 PDLSK-------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp CCSTT-------SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred cchhh-------hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 10000 012345678999999999999999999999999999987653
No 71
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2e-40 Score=369.54 Aligned_cols=251 Identities=22% Similarity=0.279 Sum_probs=206.2
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||+||+|+.. +|+.||+|++++.. ......+.+|+++++.++||||+++++++...+ .
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----~ 79 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD----R 79 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS----E
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC----E
Confidence 357899999999999999999865 69999999997642 334567889999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 80 LCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155 (337)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence 679999999999999997654 4899999999999999999999 899999999999999999999999999999864
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||...... ..... +...
T Consensus 156 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~~--------i~~~ 220 (337)
T 1o6l_A 156 ISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFEL--------ILME 220 (337)
T ss_dssp CCTTC--CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH--------HHHC
T ss_pred ccCCC--cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH-----HHHHH--------HHcC
Confidence 33221 224567999999999999999999999999999999999999999753211 11111 1111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L~ 986 (1002)
.... +...+..+.+++.+||+.+|++|| +++|+++|-.
T Consensus 221 ~~~~--------p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~ 263 (337)
T 1o6l_A 221 EIRF--------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263 (337)
T ss_dssp CCCC--------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred CCCC--------CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCC
Confidence 1111 112346688999999999999999 8999998843
No 72
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.6e-41 Score=380.46 Aligned_cols=271 Identities=23% Similarity=0.391 Sum_probs=215.7
Q ss_pred cCHHHHHHhhcCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCccee
Q 037042 696 FSYLELCQATDGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKI 767 (1002)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~ 767 (1002)
+...+.....++|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|+++++++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34444455678899999999999999999973 246889999997653 33456789999999999 79999999
Q ss_pred eeEEecCchhhHHHHHhhccCCCCChhHhhhccCC---------------------------------------------
Q 037042 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNY--------------------------------------------- 802 (1002)
Q Consensus 768 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------- 802 (1002)
++++...+. ..++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~~~---~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3vhe_A 92 LGACTKPGG---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV 168 (359)
T ss_dssp EEEECSTTS---CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred eeeeecCCC---ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence 999876542 35799999999999999976532
Q ss_pred --------------------cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 803 --------------------ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 803 --------------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
.+++..++.++.||++||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 245 (359)
T 3vhe_A 169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245 (359)
T ss_dssp ---------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTS
T ss_pred cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecc
Confidence 2889999999999999999999 89999999999999999999999999999987755
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
...........||+.|+|||++.+..++.++|||||||++|||++ |+.||........ ....+. . ..
T Consensus 246 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~~~~---~--------~~ 313 (359)
T 3vhe_A 246 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLK---E--------GT 313 (359)
T ss_dssp CTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HHHHHH---H--------TC
T ss_pred cccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-HHHHHH---c--------CC
Confidence 444444455678999999999988899999999999999999998 9999976432211 111000 0 00
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
... .+..++..+.+++.+||+.+|++|||+.|++++|+++...
T Consensus 314 ~~~-------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 314 RMR-------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCC-------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 000 0112345688999999999999999999999999988654
No 73
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=7.3e-39 Score=375.21 Aligned_cols=212 Identities=29% Similarity=0.412 Sum_probs=111.3
Q ss_pred CCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceE
Q 037042 76 LSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRIL 155 (1002)
Q Consensus 76 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 155 (1002)
+++|+.|++++|.++ .+| .+..+++|++|+|++|++.+ +|. +.++++|++|+|++|.+++..| ++++++|++|
T Consensus 45 l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~-~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 117 (466)
T 1o6v_A 45 LDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTD-ITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117 (466)
T ss_dssp HHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred hccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCC-chh--hhccccCCEEECCCCccccChh--hcCCCCCCEE
Confidence 445666666666665 344 25556666666666666653 232 4556666666666666664333 6666666666
Q ss_pred EcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCccc
Q 037042 156 RLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKL 235 (1002)
Q Consensus 156 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l 235 (1002)
+|++|++++. |. +.++++|++|+|++|.+++ +| .++.+++|++|+++ |.+
T Consensus 118 ~L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~--------------------------~~-~~~~l~~L~~L~l~-~~~ 167 (466)
T 1o6v_A 118 TLFNNQITDI-DP-LKNLTNLNRLELSSNTISD--------------------------IS-ALSGLTSLQQLSFG-NQV 167 (466)
T ss_dssp ECCSSCCCCC-GG-GTTCTTCSEEEEEEEEECC--------------------------CG-GGTTCTTCSEEEEE-ESC
T ss_pred ECCCCCCCCC-hH-HcCCCCCCEEECCCCccCC--------------------------Ch-hhccCCcccEeecC-Ccc
Confidence 6666666643 22 6666666666666666653 22 24555666666664 333
Q ss_pred ccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccc
Q 037042 236 VGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPST 315 (1002)
Q Consensus 236 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 315 (1002)
.+..+ +.++++| ++|++++|++++. ..+..+++|++|++++|.+++..|
T Consensus 168 ~~~~~--~~~l~~L-------------------------~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-- 216 (466)
T 1o6v_A 168 TDLKP--LANLTTL-------------------------ERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-- 216 (466)
T ss_dssp CCCGG--GTTCTTC-------------------------CEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred cCchh--hccCCCC-------------------------CEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--
Confidence 32211 3333333 3333333333321 124445555556666655554433
Q ss_pred cccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCC
Q 037042 316 FGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSID 362 (1002)
Q Consensus 316 ~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 362 (1002)
++.+++|+.|++++|+++.++ .+..+++|+.|++++|.+.
T Consensus 217 ~~~l~~L~~L~l~~n~l~~~~-------~l~~l~~L~~L~l~~n~l~ 256 (466)
T 1o6v_A 217 LGILTNLDELSLNGNQLKDIG-------TLASLTNLTDLDLANNQIS 256 (466)
T ss_dssp GGGCTTCCEEECCSSCCCCCG-------GGGGCTTCSEEECCSSCCC
T ss_pred ccccCCCCEEECCCCCcccch-------hhhcCCCCCEEECCCCccc
Confidence 445555555555555555432 1344455555555555443
No 74
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.5e-40 Score=369.41 Aligned_cols=257 Identities=20% Similarity=0.284 Sum_probs=207.2
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++..++ ..+
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~----~~~ 81 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN----IQY 81 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSS----EEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCC----eEE
Confidence 367999999999999999999865 78999999986543 233466889999999999999999999998776 557
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.+..
T Consensus 82 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 82 LFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp EEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 9999999999999997654 4899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
...........||+.|+|||++.+..+ +.++||||+||++|||++|+.||............|.. ..
T Consensus 158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~------------~~ 225 (323)
T 3tki_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE------------KK 225 (323)
T ss_dssp TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHT------------TC
T ss_pred CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc------------cc
Confidence 443333455689999999999877765 78999999999999999999999765433222222111 00
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
.... ....++..+.+++.+||+.||++|||+.|+++|-+-
T Consensus 226 ~~~~------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~ 265 (323)
T 3tki_A 226 TYLN------PWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY 265 (323)
T ss_dssp TTST------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred ccCC------ccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhh
Confidence 0000 012234667899999999999999999999998653
No 75
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.7e-40 Score=365.62 Aligned_cols=270 Identities=20% Similarity=0.261 Sum_probs=206.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|++.+.||+|+||+||+|+..+|+.||||++.... ......+.+|++++++++||||+++++++...+ ..+
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~ 95 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER----CLT 95 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS----CEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC----EEE
Confidence 46799999999999999999998889999999987542 234567889999999999999999999998766 567
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++ +|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 96 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 96 LVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp EEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred EEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 99999985 888888877667999999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh---hhhcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS---IMKIV 938 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~~i~ 938 (1002)
... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ............. .....
T Consensus 172 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 172 PVR--SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQ 248 (311)
T ss_dssp CCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGT
T ss_pred Ccc--cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhh
Confidence 322 2244578999999998876 568999999999999999999999997643332 1222221111000 00000
Q ss_pred ------cC--ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 939 ------DG--SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 939 ------~~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+. ....... .....+....++.+++.+||++||++|||++|+++|-+
T Consensus 249 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 303 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKP-WSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303 (311)
T ss_dssp TSHHHHSCCCCCCCCCC-HHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred ccchhhhcccccccCCc-HHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence 00 0000000 00111223467889999999999999999999998744
No 76
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=6.2e-41 Score=385.43 Aligned_cols=265 Identities=17% Similarity=0.200 Sum_probs=210.1
Q ss_pred HHHHHHhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEec
Q 037042 698 YLELCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773 (1002)
Q Consensus 698 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 773 (1002)
+.++....++|+..++||+|+||+||+|+.. +++.||||++.+.. ......+.+|+.+++.++||||+++++++..
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3344455688999999999999999999866 58899999997532 1223447889999999999999999999988
Q ss_pred CchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEec
Q 037042 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSD 853 (1002)
Q Consensus 774 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 853 (1002)
.+ ..++||||+++|+|.+++...+..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 146 ~~----~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 146 DN----NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp SS----EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECC
T ss_pred CC----EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcc
Confidence 76 568999999999999999886567999999999999999999999 89999999999999999999999999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGS-----EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND 928 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~ 928 (1002)
||+|+........ .....+||+.|+|||++. ...|+.++|||||||++|||++|+.||........ ......
T Consensus 219 FGla~~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~-~~~i~~- 295 (437)
T 4aw2_A 219 FGSCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGKIMN- 295 (437)
T ss_dssp CTTCEECCTTSCE-ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHT-
T ss_pred hhhhhhcccCCCc-ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-HHhhhh-
Confidence 9999876544332 234568999999999876 56789999999999999999999999976322111 111100
Q ss_pred HHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCC--CCCHHHHHHHHH
Q 037042 929 WLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEK--RINAKEIVTRLL 986 (1002)
Q Consensus 929 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rpt~~evl~~L~ 986 (1002)
.. ....-+.. ....+..+.+++.+|+..+|++ ||+++|+++|-+
T Consensus 296 ---~~-~~~~~p~~----------~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpf 341 (437)
T 4aw2_A 296 ---HK-ERFQFPTQ----------VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPF 341 (437)
T ss_dssp ---HH-HHCCCCSS----------CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGG
T ss_pred ---cc-ccccCCcc----------cccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCc
Confidence 00 00000000 0113456889999999988888 999999999854
No 77
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=9.8e-39 Score=374.13 Aligned_cols=217 Identities=25% Similarity=0.372 Sum_probs=129.8
Q ss_pred ccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccc
Q 037042 292 IFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVG 371 (1002)
Q Consensus 292 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 371 (1002)
+.++++|++|++++|.+++. ..+..+++|++|++++|+++.++. +..+++|+.|++++|.+.
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-------~~~l~~L~~L~l~~n~l~--------- 234 (466)
T 1o6v_A 173 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-------LGILTNLDELSLNGNQLK--------- 234 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-------GGGCTTCCEEECCSSCCC---------
T ss_pred hccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc-------ccccCCCCEEECCCCCcc---------
Confidence 55566666666666666543 235555555555555555554432 233444444444444443
Q ss_pred cccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccE
Q 037042 372 NLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQ 451 (1002)
Q Consensus 372 ~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 451 (1002)
+. ..+..+++|+.|++++|++++..| +..+++|+.|++++|.+++..+ +..+++|+.
T Consensus 235 -----------------~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 291 (466)
T 1o6v_A 235 -----------------DI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTN 291 (466)
T ss_dssp -----------------CC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSE
T ss_pred -----------------cc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCe
Confidence 22 245556666666666666665443 6666667777777766664433 566666666
Q ss_pred EEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCcc
Q 037042 452 LDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNF 531 (1002)
Q Consensus 452 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 531 (1002)
|+|++|++++..+ +..+++|+.|++++|++.+..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++
T Consensus 292 L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l 365 (466)
T 1o6v_A 292 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQI 365 (466)
T ss_dssp EECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCC
T ss_pred EEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCcc
Confidence 6676666665433 5666666666666666666544 56666666666666666653 3566666666666666666
Q ss_pred CccCcccccCCccccEEEccCeeecc
Q 037042 532 SGVIPNAIGGIKDLQFLFLEYNILQG 557 (1002)
Q Consensus 532 ~~~~p~~~~~l~~L~~L~Ls~N~l~~ 557 (1002)
++..| +..+++|+.|++++|.+++
T Consensus 366 ~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 366 SDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred Cccch--hhcCCCCCEEeccCCcccC
Confidence 66555 6666666666666666664
No 78
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.2e-40 Score=362.12 Aligned_cols=270 Identities=21% Similarity=0.343 Sum_probs=211.2
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||+||+|+.. +++.||+|++... .....+.+.+|+.++++++||||+++++++...+ .
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~----~ 85 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD----C 85 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS----E
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC----e
Confidence 457999999999999999999854 6899999998643 2334577899999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+ .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 86 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 86 YYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred EEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 679999999999999997765 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ . .+....
T Consensus 162 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-----~--------~~~~~~ 227 (294)
T 4eqm_A 162 SETSLT-QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI-----A--------IKHIQD 227 (294)
T ss_dssp --------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH-----H--------HHHHSS
T ss_pred cccccc-ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-----H--------HHHhhc
Confidence 543221 22345689999999999998999999999999999999999999976422111 0 011111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-CHHHHHHHHHhhcccCCCCCCCC
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-NAKEIVTRLLKINDLDFNGYPSY 999 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-t~~evl~~L~~i~~~~~~~~~~y 999 (1002)
.... ........++..+.+++.+|++.+|++|| +++++.+.|+++.........-|
T Consensus 228 ~~~~---~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~~~~ 284 (294)
T 4eqm_A 228 SVPN---VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANEDVY 284 (294)
T ss_dssp CCCC---HHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTCCCC
T ss_pred cCCC---cchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCcchh
Confidence 1110 01111223557799999999999999999 89999999998876555444433
No 79
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.5e-40 Score=362.89 Aligned_cols=259 Identities=23% Similarity=0.381 Sum_probs=210.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|++.++..||||++..... ..+.+.+|++++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 97 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR----PIFII 97 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----SEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC----CeEEE
Confidence 457889999999999999999998888999999976532 3467889999999999999999999998766 45799
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++|+|.+++......+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 98 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp ECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 9999999999999876667999999999999999999999 8999999999999999999999999999998765432
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
. .......+|+.|+|||++.+..++.++||||+||++|||++ |+.||....... .... +........
T Consensus 175 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~-----~~~~-----~~~~~~~~~- 242 (283)
T 3gen_A 175 Y-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-----TAEH-----IAQGLRLYR- 242 (283)
T ss_dssp H-HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----HHHH-----HHTTCCCCC-
T ss_pred c-ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH-----HHHH-----HhcccCCCC-
Confidence 1 12244567888999999988899999999999999999998 999997643211 1110 111100000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
+..++..+.+++.+||+.+|++|||+.|++++|+++.+.+
T Consensus 243 ---------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 243 ---------PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp ---------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ---------CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 1122456889999999999999999999999999987654
No 80
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=376.95 Aligned_cols=267 Identities=27% Similarity=0.390 Sum_probs=216.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC--------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecC
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ--------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIG 774 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 774 (1002)
.++|++.+.||+|+||+||+|+.. .+..||||++.... ......+.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 357889999999999999999852 24679999997653 33457789999999999 899999999999876
Q ss_pred chhhHHHHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCC
Q 037042 775 DFKALFKALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839 (1002)
Q Consensus 775 ~~~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~ 839 (1002)
+ ..++||||+++|+|.+++.... ..+++..++.++.||++||+||| +.+|+||||||+
T Consensus 148 ~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~ 220 (382)
T 3tt0_A 148 G----PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAAR 220 (382)
T ss_dssp S----SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGG
T ss_pred C----ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcc
Confidence 6 5679999999999999998654 25899999999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccc
Q 037042 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNE 918 (1002)
Q Consensus 840 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~ 918 (1002)
||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 221 NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~- 299 (382)
T 3tt0_A 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV- 299 (382)
T ss_dssp GEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-
T ss_pred eEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-
Confidence 99999999999999999987765443333455567889999999999999999999999999999999 9999875322
Q ss_pred cccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCCCC
Q 037042 919 GMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGYPS 998 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~~~ 998 (1002)
.+........ .... .+..++..+.+++.+||+.+|++|||+.|++++|+++..........
T Consensus 300 ----~~~~~~~~~~-----~~~~----------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~ 360 (382)
T 3tt0_A 300 ----EELFKLLKEG-----HRMD----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMG 360 (382)
T ss_dssp ----HHHHHHHHTT-----CCCC----------CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC--
T ss_pred ----HHHHHHHHcC-----CCCC----------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCC
Confidence 1111111100 0000 01224567899999999999999999999999999998766555443
No 81
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.2e-40 Score=377.62 Aligned_cols=259 Identities=24% Similarity=0.452 Sum_probs=198.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
..+|++.+.||+|+||+||+|+.. ++..||||+++... ....+.+.+|++++++++||||+++++++...+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 119 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK---- 119 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC----
Confidence 357999999999999999999864 57789999997643 344577999999999999999999999998766
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++...+..+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 120 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred ceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 567999999999999999887667999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCce-eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 860 LTREDQF-VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 860 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
....... .......+|..|+|||++.+..++.++|||||||++|||++ |+.||...... +.... +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-----~~~~~--------i 263 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKA--------V 263 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-----HHHHH--------H
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH--------H
Confidence 6543221 11223345778999999988899999999999999999998 99999654221 11111 0
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
..+... . .+..++..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 264 ~~~~~~-~------~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 264 DEGYRL-P------PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp HTTEEC-C------CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCCC-C------CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 000000 0 112345678999999999999999999999999998853
No 82
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.1e-41 Score=378.52 Aligned_cols=258 Identities=25% Similarity=0.419 Sum_probs=208.0
Q ss_pred cCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
++|+..+.||+|+||+||+|++. +++.||||+++... ......+.+|+.++++++||||+++++++....
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--- 147 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL--- 147 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC---
Confidence 56888999999999999999843 46789999997543 344567889999999999999999999998766
Q ss_pred HHHHHhhccCCCCChhHhhhccC------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC---cE
Q 037042 779 LFKALALEYMPHGSLEKYLYSSN------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM---VA 849 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~---~~ 849 (1002)
..++||||+++|+|.+++...+ ..+++..++.++.||++||+||| +++|+||||||+|||++.++ .+
T Consensus 148 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 148 -PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp -SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred -CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceE
Confidence 4579999999999999998653 35889999999999999999999 89999999999999999554 59
Q ss_pred EEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHH
Q 037042 850 HLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVND 928 (1002)
Q Consensus 850 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~ 928 (1002)
||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||...... +....
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~-----~~~~~ 298 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-----EVLEF 298 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHH
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH
Confidence 9999999986644332223344567899999999988899999999999999999998 99999764221 11111
Q ss_pred HHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 929 WLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 929 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
+....... .+..++..+.+++.+||+.+|++|||+.|++++|+.+..
T Consensus 299 --------i~~~~~~~-------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 299 --------VTSGGRMD-------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp --------HHTTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------HHcCCCCC-------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 11111000 012345668899999999999999999999999998874
No 83
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-40 Score=372.08 Aligned_cols=264 Identities=28% Similarity=0.464 Sum_probs=212.3
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
..++|+..+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++...+
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 123 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK- 123 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC-
Confidence 4578999999999999999999864 35889999998653 334677899999999999999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccC-----------------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEE
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSN-----------------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIH 833 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiH 833 (1002)
..++||||+++|+|.+++.... ..+++..++.++.||++||+||| +++|+|
T Consensus 124 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH 197 (343)
T 1luf_A 124 ---PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVH 197 (343)
T ss_dssp ---SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred ---ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeec
Confidence 5689999999999999997642 45889999999999999999999 899999
Q ss_pred ccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCC
Q 037042 834 CDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPT 912 (1002)
Q Consensus 834 rDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~ 912 (1002)
|||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 99999999999999999999999987654433333345678899999999888889999999999999999999 99999
Q ss_pred cccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 913 NEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
...... +... .+.++.... .+..++..+.+++.+||+.+|++||++.|++++|+++.+..
T Consensus 278 ~~~~~~-----~~~~--------~~~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 278 YGMAHE-----EVIY--------YVRDGNILA-------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp TTSCHH-----HHHH--------HHHTTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred CCCChH-----HHHH--------HHhCCCcCC-------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 753221 1111 111111110 11234567899999999999999999999999999988655
Q ss_pred CC
Q 037042 993 FN 994 (1002)
Q Consensus 993 ~~ 994 (1002)
..
T Consensus 338 ~~ 339 (343)
T 1luf_A 338 EG 339 (343)
T ss_dssp --
T ss_pred hh
Confidence 43
No 84
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=373.14 Aligned_cols=251 Identities=23% Similarity=0.294 Sum_probs=201.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|+..+.||+|+||+||+|+.. +|+.||||++++.. ......+.+|.++++.+ +||||+++++++...+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~---- 97 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD---- 97 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC----
Confidence 468999999999999999999865 68999999997642 23456678899999988 7999999999998776
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.
T Consensus 98 ~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 98 RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceee
Confidence 5689999999999999997765 4899999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||...... +... .+..
T Consensus 174 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-----~~~~--------~i~~ 238 (353)
T 3txo_A 174 GICNGV--TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-----DLFE--------AILN 238 (353)
T ss_dssp SCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HHHH
T ss_pred cccCCc--cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-----HHHH--------HHHc
Confidence 433221 234567999999999998888999999999999999999999999764221 1111 1111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH------HHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA------KEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~------~evl~~L~ 986 (1002)
.....+ ...+..+.+++.+||+.+|++||++ .|+++|-.
T Consensus 239 ~~~~~p--------~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~ 283 (353)
T 3txo_A 239 DEVVYP--------TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPF 283 (353)
T ss_dssp CCCCCC--------TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGG
T ss_pred CCCCCC--------CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCc
Confidence 111111 1134568899999999999999998 88887743
No 85
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-39 Score=362.79 Aligned_cols=271 Identities=24% Similarity=0.326 Sum_probs=207.2
Q ss_pred HhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhc--cCCCcceeeeEEecCchhhHH
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI--RHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~~~ 780 (1002)
...++|++.+.||+|+||+||+|+.. ++.||||++.... ......|.+++... +||||+++++++.........
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 34568999999999999999999876 8999999986542 23445566666554 899999999998876433235
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCC--------CcEEccCCCCCeeeCCCCcEEEe
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST--------PVIHCDLKPSNVLLGDNMVAHLS 852 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~--------~iiHrDlkp~NILl~~~~~~kl~ 852 (1002)
.++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+||+
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred eEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 57999999999999999765 4899999999999999999999 66 99999999999999999999999
Q ss_pred cccccccccCCCceee--eccCCCCcccccccccCCCCcCcc------cchHHHHHHHHHHHhC----------CCCCcc
Q 037042 853 DFGITKLLTREDQFVT--QTQTPATIGYMALEYGSEGRVSTN------GDVYNFGVMLMETFTG----------KKPTNE 914 (1002)
Q Consensus 853 DfGla~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~------~DvwSlGv~l~elltg----------~~P~~~ 914 (1002)
|||+++.+........ .....||+.|+|||++.+..++.+ +|||||||++|||++| +.||..
T Consensus 185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~ 264 (337)
T 3mdy_A 185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264 (337)
T ss_dssp CCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence 9999987654332211 134579999999999887766655 9999999999999999 666655
Q ss_pred cccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 915 IFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
..........+.... .................++..+.+++.+||+.||++|||+.|++++|+++.+.
T Consensus 265 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 265 LVPSDPSYEDMREIV---------CIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp TSCSSCCHHHHHHHH---------TTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred hcCCCCchhhhHHHH---------hhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 433333322222111 00111111111223346788899999999999999999999999999998764
No 86
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=9.7e-40 Score=357.24 Aligned_cols=253 Identities=25% Similarity=0.395 Sum_probs=204.1
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccch-------hHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGR-------AFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
.++|+..+.||+|+||+||+|+. .+++.||||++...... ..+.+.+|++++++++||||+++++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 46799999999999999999986 47899999998643221 1267889999999999999999999986554
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCC--cEEccCCCCCeeeCCCCc-----E
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP--VIHCDLKPSNVLLGDNMV-----A 849 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiHrDlkp~NILl~~~~~-----~ 849 (1002)
++||||+++|+|.+++......+++..+..++.|++.|++||| +.+ |+||||||+||+++.++. +
T Consensus 97 -----~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~ 168 (287)
T 4f0f_A 97 -----RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCA 168 (287)
T ss_dssp -----EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCE
T ss_pred -----eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeE
Confidence 4899999999999999877777999999999999999999999 888 999999999999988776 9
Q ss_pred EEecccccccccCCCceeeeccCCCCccccccccc--CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH
Q 037042 850 HLSDFGITKLLTREDQFVTQTQTPATIGYMALEYG--SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN 927 (1002)
Q Consensus 850 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~ 927 (1002)
||+|||+++..... .....||+.|+|||++ ....++.++||||+||++|||++|+.||............
T Consensus 169 kl~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~--- 240 (287)
T 4f0f_A 169 KVADFGLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN--- 240 (287)
T ss_dssp EECCCTTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHH---
T ss_pred EeCCCCcccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHH---
Confidence 99999999754432 2346789999999998 3456789999999999999999999999764332211111
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
...... .... .+..++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 241 ~~~~~~----~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 241 MIREEG----LRPT----------IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHSC----CCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHhccC----CCCC----------CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 100000 0000 1123456789999999999999999999999999874
No 87
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.1e-40 Score=364.74 Aligned_cols=253 Identities=19% Similarity=0.284 Sum_probs=205.9
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc------hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG------RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
+.|+..+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++....
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--- 87 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--- 87 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC---
Confidence 46889999999999999999865 689999999875432 13577899999999999999999999998766
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC----cEEEecc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM----VAHLSDF 854 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~----~~kl~Df 854 (1002)
..++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+||
T Consensus 88 -~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 88 -DVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp -EEEEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred -EEEEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 5679999999999999997654 5899999999999999999999 89999999999999999877 8999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
|+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... +....
T Consensus 163 g~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~------ 228 (326)
T 2y0a_A 163 GLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-----ETLAN------ 228 (326)
T ss_dssp TTCEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHHHH------
T ss_pred CCCeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-----HHHHH------
Confidence 99987754332 23457999999999999889999999999999999999999999653221 11111
Q ss_pred hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 935 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+......... .....++..+.+++.+||..||++|||+.|+++|-+
T Consensus 229 --~~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 274 (326)
T 2y0a_A 229 --VSAVNYEFED----EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274 (326)
T ss_dssp --HHHTCCCCCH----HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTT
T ss_pred --HHhcCCCcCc----cccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 1101110010 111234567889999999999999999999998743
No 88
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.8e-40 Score=369.90 Aligned_cols=258 Identities=25% Similarity=0.398 Sum_probs=203.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcE----EEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGME----VAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
.++|+..+.||+|+||+||+|++. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++..+.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST--- 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS---
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC---
Confidence 356899999999999999999854 4443 5888775432 345578899999999999999999999998765
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
.++|+||+++|+|.+++...+..+++..++.++.||++||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 91 --~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 91 --VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp --EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred --eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCccee
Confidence 35899999999999999887777999999999999999999999 8899999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
...............+|..|+|||++.+..++.++|||||||++|||++ |+.||....... ....+.
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~---------- 233 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILE---------- 233 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHH----------
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HHHHHH----------
Confidence 8765544434455567889999999999999999999999999999999 999997643221 111110
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... .+..++..+.+++.+||+.+|++||++.|++++|+++..
T Consensus 234 --~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 234 --KGERLP------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp --TTCCCC------CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred --cCCCCC------CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 000000 112244578899999999999999999999999988753
No 89
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=8.8e-40 Score=361.68 Aligned_cols=248 Identities=23% Similarity=0.272 Sum_probs=205.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||+|++++.. ....+.+.+|+.+++.++||||+++++++.... .
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~----~ 80 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ----Q 80 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS----E
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC----E
Confidence 357899999999999999999865 69999999997642 234567888999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 81 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~ 156 (318)
T 1fot_A 81 IFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV 156 (318)
T ss_dssp EEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred EEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceec
Confidence 679999999999999998754 4899999999999999999999 999999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... ...+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ... .++...
T Consensus 157 ~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~--------~~i~~~ 218 (318)
T 1fot_A 157 PDVT-----YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-----KTY--------EKILNA 218 (318)
T ss_dssp SSCB-----CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHH--------HHHHHC
T ss_pred CCcc-----ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-----HHH--------HHHHhC
Confidence 4321 3457999999999999999999999999999999999999999763211 111 111111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L~ 986 (1002)
....+ ...+..+.+++.+|+..+|++|| +++|+++|-+
T Consensus 219 ~~~~p--------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~ 261 (318)
T 1fot_A 219 ELRFP--------PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261 (318)
T ss_dssp CCCCC--------TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred CCCCC--------CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCcc
Confidence 11111 12345688999999999999999 8999998743
No 90
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.5e-40 Score=364.96 Aligned_cols=249 Identities=22% Similarity=0.342 Sum_probs=205.1
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|.+.+.||+|+||.||+|+. .+++.||||++.+.. ......+.+|+++++.++||||+++++++...+ .
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----~ 83 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT----D 83 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS----E
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC----E
Confidence 36799999999999999999986 578999999987532 223467889999999999999999999998776 4
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+ +|+|.+++...+ .+++..+..++.||+.|++||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~~lv~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~ 158 (336)
T 3h4j_B 84 IVMVIEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158 (336)
T ss_dssp EEEEECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred EEEEEECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence 67999999 789999887655 4899999999999999999999 889999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
..... ....+||+.|+|||++.+..+ ++++||||+||++|||++|+.||........ ..++..
T Consensus 159 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-------------~~~i~~ 222 (336)
T 3h4j_B 159 TDGNF---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-------------FKKVNS 222 (336)
T ss_dssp TTSBT---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-------------BCCCCS
T ss_pred cCCcc---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-------------HHHHHc
Confidence 54432 234579999999999988776 7899999999999999999999976432211 111111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... .+...+..+.+++.+||+.||.+|||++|+++|-+
T Consensus 223 ~~~~--------~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 261 (336)
T 3h4j_B 223 CVYV--------MPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPW 261 (336)
T ss_dssp SCCC--------CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHH
T ss_pred CCCC--------CcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChh
Confidence 1111 11223466889999999999999999999999866
No 91
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=4.8e-40 Score=372.38 Aligned_cols=273 Identities=16% Similarity=0.190 Sum_probs=208.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeCC------CcEEEEEEeecccchhH-----------HHHHHHHHHHHhccCCCccee
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQD------GMEVAVKVFNQQCGRAF-----------KSFDVECEVMKSIRHRNIIKI 767 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~~ 767 (1002)
.++|++.+.||+|+||+||+|++.. ++.||||++........ .....|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4579999999999999999998654 47899999876532111 123345666777889999999
Q ss_pred eeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC--C
Q 037042 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG--D 845 (1002)
Q Consensus 768 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~--~ 845 (1002)
++++........+.++||||+ +++|.+++......+++..++.++.||+.||+||| +.+|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCC
Confidence 999876532223467999999 99999999887667999999999999999999999 88999999999999998 8
Q ss_pred CCcEEEecccccccccCCCceee-----eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc
Q 037042 846 NMVAHLSDFGITKLLTREDQFVT-----QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM 920 (1002)
Q Consensus 846 ~~~~kl~DfGla~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~ 920 (1002)
++.+||+|||+++.+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 89999999999987654322111 1334599999999999999999999999999999999999999986433221
Q ss_pred cHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 921 TLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
...+........+..+.+.... ...++..+.+++..||+.+|++||++.++++.|+++-..
T Consensus 270 -~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 270 -YVRDSKIRYRENIASLMDKCFP---------AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp -HHHHHHHHHHHCHHHHHHHHSC---------TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHhhhhHHHHHHHhcc---------cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 1111111111122222211110 122356799999999999999999999999999887643
No 92
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=9.1e-40 Score=377.25 Aligned_cols=255 Identities=20% Similarity=0.271 Sum_probs=205.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||+||+|.. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----~~ 85 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEG----HH 85 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS----EE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC----EE
Confidence 46799999999999999999975 479999999997643 234567889999999999999999999998776 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC---CCCcEEEecccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG---DNMVAHLSDFGITK 858 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGla~ 858 (1002)
++||||+++|+|.+++...+ .+++..+..++.||++||+||| +++|+||||||+|||++ .++.+||+|||+++
T Consensus 86 ~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 86 YLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 79999999999999997765 4899999999999999999999 89999999999999998 56889999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... ......||+.|+|||++.+..|+.++||||+||++|||++|+.||...... ..... +.
T Consensus 162 ~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~-----~~~~~--------i~ 226 (444)
T 3soa_A 162 EVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH-----RLYQQ--------IK 226 (444)
T ss_dssp CCCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHH--------HH
T ss_pred EecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH-----HHHHH--------HH
Confidence 7654332 224567999999999999989999999999999999999999999653221 11111 11
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+....... ....++..+.+++.+||+.||++|||+.|+++|-+
T Consensus 227 ~~~~~~~~~----~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~ 270 (444)
T 3soa_A 227 AGAYDFPSP----EWDTVTPEAKDLINKMLTINPSKRITAAEALKHPW 270 (444)
T ss_dssp HTCCCCCTT----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCT
T ss_pred hCCCCCCcc----ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence 111110000 01123567889999999999999999999998743
No 93
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=8.6e-40 Score=371.13 Aligned_cols=255 Identities=19% Similarity=0.248 Sum_probs=208.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|++.+.||+|+||+||+|+.. +|+.||+|++..........+.+|++++++++||||+++++++.... ..++
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~----~~~l 125 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY----EMVL 125 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS----EEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC----EEEE
Confidence 457999999999999999999865 68999999998765555678899999999999999999999998766 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC--CCCcEEEeccccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG--DNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~--~~~~~kl~DfGla~~~~ 861 (1002)
||||+++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+||+++ .++.+||+|||+++...
T Consensus 126 v~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp EEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 99999999999999877667999999999999999999999 89999999999999997 45789999999998776
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
..... ....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ....... ...
T Consensus 203 ~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-----~~~~~i~--------~~~ 266 (387)
T 1kob_A 203 PDEIV---KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-----ETLQNVK--------RCD 266 (387)
T ss_dssp TTSCE---EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHHHHHH--------HCC
T ss_pred CCcce---eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-----HHHHHHH--------hCC
Confidence 54322 2346899999999999999999999999999999999999999763211 1111110 000
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
...... ....++..+.+++.+||..||++|||+.|+++|-+
T Consensus 267 ~~~~~~----~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 307 (387)
T 1kob_A 267 WEFDED----AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPW 307 (387)
T ss_dssp CCCCSS----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTT
T ss_pred CCCCcc----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCcc
Confidence 000000 01123467889999999999999999999998844
No 94
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=8.1e-40 Score=364.40 Aligned_cols=265 Identities=26% Similarity=0.479 Sum_probs=195.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeCC-C---cEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQD-G---MEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
.++|+..+.||+|+||+||+|+... + ..||||+++.. .....+.+.+|++++++++||||+++++++.......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 4679999999999999999998653 3 27999998754 3445678999999999999999999999987765221
Q ss_pred H--HHHHhhccCCCCChhHhhhccC-----CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEE
Q 037042 779 L--FKALALEYMPHGSLEKYLYSSN-----YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHL 851 (1002)
Q Consensus 779 ~--~~~lv~e~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl 851 (1002)
. ..++||||+++|+|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEEE
Confidence 1 1168999999999999986532 15899999999999999999999 899999999999999999999999
Q ss_pred ecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHH
Q 037042 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 852 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||........ ..
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~------ 250 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI--YN------ 250 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HH------
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH--HH------
Confidence 99999987765544334445567889999999988899999999999999999999 9999976433211 11
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
.+....... .+..++..+.+++.+||+.||++|||+.|+++.|+++-..-
T Consensus 251 -----~~~~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 251 -----YLIGGNRLK-------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp -----HHHTTCCCC-------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred -----HHhcCCCCC-------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 111111000 01224467899999999999999999999999999887543
No 95
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=6.8e-40 Score=371.75 Aligned_cols=256 Identities=20% Similarity=0.268 Sum_probs=203.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|+..++||+|+||+||+|+.. +++.||||++++.. ......+..|..+++++ +|||||++++++...+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~---- 126 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES---- 126 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS----
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC----
Confidence 457999999999999999999865 68899999998652 22345678899999887 8999999999998776
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.
T Consensus 127 ~~~lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 127 RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 5679999999999999998755 4899999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccccc---ccHHHHHHHHHhhhhhh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG---MTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~---~~~~~~~~~~~~~~~~~ 936 (1002)
...... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||....... .....+... .
T Consensus 203 ~~~~~~--~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~-------~ 273 (396)
T 4dc2_A 203 GLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ-------V 273 (396)
T ss_dssp CCCTTC--CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHH-------H
T ss_pred cccCCC--ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHH-------H
Confidence 433222 2345689999999999999999999999999999999999999996532211 111111111 1
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH------HHHHHHH
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA------KEIVTRL 985 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~------~evl~~L 985 (1002)
+....... +...+..+.+++.+||+.||++||++ +|+++|-
T Consensus 274 i~~~~~~~--------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hp 320 (396)
T 4dc2_A 274 ILEKQIRI--------PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 320 (396)
T ss_dssp HHHCCCCC--------CTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHST
T ss_pred HhccccCC--------CCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCc
Confidence 11111111 11234568899999999999999995 6888774
No 96
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3e-40 Score=384.88 Aligned_cols=259 Identities=24% Similarity=0.412 Sum_probs=211.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|++.++..||||+++... ...+.+.+|++++++++||||+++++++... ..++|
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~-----~~~lv 260 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-----PIYII 260 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----SCEEE
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCC-----ccEEE
Confidence 45688889999999999999999888999999998653 3467899999999999999999999998633 35799
Q ss_pred hccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++|+|.+++..... .+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++.....
T Consensus 261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 337 (454)
T ss_dssp ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence 999999999999986532 5888999999999999999999 899999999999999999999999999999876532
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. .......+|..|+|||++....++.++|||||||++|||++ |+.||...... +.... +..+..
T Consensus 338 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~--------i~~~~~ 403 (454)
T 1qcf_A 338 EY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRA--------LERGYR 403 (454)
T ss_dssp HH-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHH--------HHHTCC
T ss_pred ce-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHH--------HHcCCC
Confidence 21 11234457888999999988899999999999999999999 99999763221 11111 111100
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
. ..+..++..+.++|.+||+.+|++|||+.++++.|+.+.....
T Consensus 404 ~-------~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~ 447 (454)
T 1qcf_A 404 M-------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447 (454)
T ss_dssp C-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSC
T ss_pred C-------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccc
Confidence 0 0122356779999999999999999999999999999875443
No 97
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.2e-39 Score=367.85 Aligned_cols=254 Identities=20% Similarity=0.336 Sum_probs=206.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~----~~ 103 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES----FH 103 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----EE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC----EE
Confidence 457999999999999999999865 68999999997542 334567889999999999999999999998776 55
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC---CcEEEecccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN---MVAHLSDFGITK 858 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~---~~~kl~DfGla~ 858 (1002)
++||||+++|+|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+||+++.+ +.+||+|||++.
T Consensus 104 ~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 104 YLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp EEEECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 79999999999999987654 4899999999999999999999 8999999999999999764 459999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... .....||+.|+|||++.+..|+.++||||+||++|||++|+.||..... ...... +.
T Consensus 180 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-----~~~~~~--------i~ 243 (362)
T 2bdw_A 180 EVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-----HRLYAQ--------IK 243 (362)
T ss_dssp CCTTCCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH--------HH
T ss_pred EecCCcc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHH--------HH
Confidence 7654332 2346799999999999998999999999999999999999999975321 111111 11
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+....... ....++..+.+++.+||+.||++|||+.|+++|-+
T Consensus 244 ~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 287 (362)
T 2bdw_A 244 AGAYDYPSP----EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 287 (362)
T ss_dssp HTCCCCCTT----GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHH
T ss_pred hCCCCCCcc----cccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 111110000 01224567889999999999999999999998854
No 98
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=5.5e-40 Score=364.18 Aligned_cols=259 Identities=27% Similarity=0.448 Sum_probs=212.1
Q ss_pred hcCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++...+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG-- 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--
Confidence 45788999999999999999975 245889999997643 344577889999999999999999999998766
Q ss_pred hHHHHHhhccCCCCChhHhhhccCC-----------------------cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNY-----------------------ILDIFQRLNIMIDVASALEYLYFGYSTPVIHC 834 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~-----------------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHr 834 (1002)
..++||||+++|+|.+++..... .+++..++.++.||++||+||| +++|+||
T Consensus 100 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~ 174 (314)
T 2ivs_A 100 --PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHR 174 (314)
T ss_dssp --SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred --ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCccc
Confidence 56799999999999999976432 3789999999999999999999 8999999
Q ss_pred cCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCc
Q 037042 835 DLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTN 913 (1002)
Q Consensus 835 Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~ 913 (1002)
||||+||+++.++.+||+|||+++...............+|+.|+|||+..+..++.++||||+||++|||++ |+.||.
T Consensus 175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 254 (314)
T 2ivs_A 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 254 (314)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999987765544444455567889999999988889999999999999999999 999997
Q ss_pred ccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 914 EIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... ....+. ...... .+..++..+.+++.+||+.+|++||++.|++++|+++-.
T Consensus 255 ~~~~~~--~~~~~~-----------~~~~~~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 255 GIPPER--LFNLLK-----------TGHRME-------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp TCCGGG--HHHHHH-----------TTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCHHH--HHHHhh-----------cCCcCC-------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 643221 111100 000000 012245678999999999999999999999999998754
No 99
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=358.61 Aligned_cols=276 Identities=21% Similarity=0.281 Sum_probs=212.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...... ..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~~~ 85 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTR--HKV 85 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTC--CEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCc--eEE
Confidence 356899999999999999999865 58999999997543 23457788999999999999999999998765422 346
Q ss_pred HhhccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee----CCCCcEEEecccc
Q 037042 783 LALEYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL----GDNMVAHLSDFGI 856 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl----~~~~~~kl~DfGl 856 (1002)
+||||+++|+|.+++..... .+++..++.++.||++||+||| +.+|+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 99999999999999987543 3899999999999999999999 8999999999999999 7888999999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccC--------CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGS--------EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND 928 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~ 928 (1002)
++........ ....||..|+|||++. +..++.++|||||||++|||++|+.||.......... +.+..
T Consensus 163 a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~ 238 (319)
T 4euu_A 163 ARELEDDEQF---VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK-EVMYK 238 (319)
T ss_dssp CEECCTTCCB---CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCH-HHHHH
T ss_pred ceecCCCCce---eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhH-HHHHH
Confidence 9877654322 3456899999999865 5678999999999999999999999997543332222 22221
Q ss_pred HHhhh----hhhccc---CccCC--hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 929 WLLIS----IMKIVD---GSLLS--REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 929 ~~~~~----~~~i~~---~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
..... +..+.. ..... ...............+.+++.+||+.||++|||++|+++|.....
T Consensus 239 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred HhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 11111 111100 00000 000011123456788999999999999999999999999987543
No 100
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=4e-40 Score=370.60 Aligned_cols=254 Identities=20% Similarity=0.282 Sum_probs=204.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-----chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-----GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~---- 99 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG---- 99 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC----
Confidence 46899999999999999999864 68999999986431 123577899999999999999999999998766
Q ss_pred HHHHhhccCCCCChhHhhhcc---CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc---EEEec
Q 037042 780 FKALALEYMPHGSLEKYLYSS---NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV---AHLSD 853 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~---~kl~D 853 (1002)
..++||||+++|+|.+++... +..+++..+..++.||++||+||| +++|+||||||+||+++.++. +||+|
T Consensus 100 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~D 176 (351)
T 3c0i_A 100 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGG 176 (351)
T ss_dssp EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECC
T ss_pred EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEec
Confidence 567999999999998887653 225889999999999999999999 899999999999999986554 99999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
||+++....... ......||+.|+|||++.+..|+.++||||+||++|||++|+.||..... ....
T Consensus 177 fg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~------ 242 (351)
T 3c0i_A 177 FGVAIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE------RLFE------ 242 (351)
T ss_dssp CTTCEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH------HHHH------
T ss_pred CcceeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH------HHHH------
Confidence 999987765332 22455799999999999998999999999999999999999999976321 1111
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+......... .....++..+.+++.+||+.||++|||+.|+++|-+
T Consensus 243 --~i~~~~~~~~~----~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~ 289 (351)
T 3c0i_A 243 --GIIKGKYKMNP----RQWSHISESAKDLVRRMLMLDPAERITVYEALNHPW 289 (351)
T ss_dssp --HHHHTCCCCCH----HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred --HHHcCCCCCCc----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChh
Confidence 11111111110 011234567899999999999999999999998743
No 101
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4.6e-40 Score=367.59 Aligned_cols=251 Identities=21% Similarity=0.301 Sum_probs=204.2
Q ss_pred HhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 777 (1002)
...++|+..+.||+|+||.||+|+.. +|+.||||++++.. ......+..|.++++.+ +||||+++++++...+
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~-- 91 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE-- 91 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC--
Confidence 34578999999999999999999865 68999999997642 23456678899999887 8999999999998776
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
..++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 92 --~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 92 --NLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp --EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred --EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhh
Confidence 5689999999999999998754 4899999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
+....... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||...... +... .+
T Consensus 166 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~--------~i 230 (345)
T 1xjd_A 166 KENMLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE-----ELFH--------SI 230 (345)
T ss_dssp BCCCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HH
T ss_pred hhcccCCC--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH-----HHHH--------HH
Confidence 86433221 224567999999999999999999999999999999999999999753221 1111 11
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHH-HHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAK-EIVTR 984 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~-evl~~ 984 (1002)
....... +...+..+.+++.+||..+|++||++. |+++|
T Consensus 231 ~~~~~~~--------p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 231 RMDNPFY--------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp HHCCCCC--------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HhCCCCC--------CcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 1111111 112345688999999999999999998 77765
No 102
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.6e-40 Score=368.59 Aligned_cols=262 Identities=23% Similarity=0.367 Sum_probs=209.3
Q ss_pred hcCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 776 (1002)
.++|+..+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~- 122 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG- 122 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC-
Confidence 46789999999999999999985 246689999997542 33457889999999999 8999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCC----------------------cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEc
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNY----------------------ILDIFQRLNIMIDVASALEYLYFGYSTPVIHC 834 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~----------------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHr 834 (1002)
..++||||+++|+|.+++..... .+++..++.++.||++||+||| +++|+||
T Consensus 123 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 196 (344)
T 1rjb_A 123 ---PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHR 196 (344)
T ss_dssp ---SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEET
T ss_pred ---ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 56799999999999999986542 3788999999999999999999 8999999
Q ss_pred cCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCc
Q 037042 835 DLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTN 913 (1002)
Q Consensus 835 Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~ 913 (1002)
||||+||+++.++.+||+|||++................||+.|+|||++.+..++.++|||||||++|||+| |+.||.
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 9999999999999999999999987765544334445567889999999888899999999999999999998 999997
Q ss_pred ccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 914 EIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
....... ....+ ....... .+..++..+.+++.+||..+|++|||+.|++++|+.+....
T Consensus 277 ~~~~~~~-~~~~~------------~~~~~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 277 GIPVDAN-FYKLI------------QNGFKMD------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp TCCCSHH-HHHHH------------HTTCCCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred cCCcHHH-HHHHH------------hcCCCCC------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 6432211 11110 0000000 01123467899999999999999999999999999887543
No 103
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=357.52 Aligned_cols=258 Identities=24% Similarity=0.361 Sum_probs=201.1
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
++|+..+.||+|+||+||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++... .++||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~------~~lv~ 78 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLNP------VCLVM 78 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTTT------TEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC------cEEEE
Confidence 46888999999999999999875 789999998653 3457789999999999999999999987632 47999
Q ss_pred ccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc-EEEecccccccccC
Q 037042 786 EYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV-AHLSDFGITKLLTR 862 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~-~kl~DfGla~~~~~ 862 (1002)
||+++|+|.+++...+. .+++..++.++.|+++||+|||..+.++|+||||||+||+++.++. +||+|||++.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999999987653 4788899999999999999999433389999999999999988876 79999999976543
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..... +.....
T Consensus 159 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~~~--------~~~~~~ 222 (307)
T 2eva_A 159 HM-----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF---RIMWA--------VHNGTR 222 (307)
T ss_dssp -----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH---HHHHH--------HHTTCC
T ss_pred cc-----ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH---HHHHH--------HhcCCC
Confidence 21 234689999999999998999999999999999999999999975432211 11000 000000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCC
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNG 995 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~ 995 (1002)
.. ....++..+.+++.+||+.+|++|||+.|++++|+.+.......
T Consensus 223 ~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 268 (307)
T 2eva_A 223 PP-------LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGA 268 (307)
T ss_dssp CC-------CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCT
T ss_pred CC-------cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCC
Confidence 00 01123456889999999999999999999999999988665443
No 104
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=368.76 Aligned_cols=250 Identities=20% Similarity=0.295 Sum_probs=199.9
Q ss_pred CCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccC
Q 037042 710 ENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYM 788 (1002)
Q Consensus 710 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 788 (1002)
..+.||+|+||.||+|+. .+|+.||+|+++.......+.+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~----~~~lv~E~~ 168 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN----DIVLVMEYV 168 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----EEEEEEECC
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC----EEEEEEeCC
Confidence 356899999999999985 469999999998765556778999999999999999999999998776 467999999
Q ss_pred CCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee--CCCCcEEEecccccccccCCCce
Q 037042 789 PHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL--GDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 789 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl--~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
++|+|.+++......+++..+..++.||++||+||| +.+|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 169 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~- 244 (373)
T 2x4f_A 169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK- 244 (373)
T ss_dssp TTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB-
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc-
Confidence 999999999876667999999999999999999999 8999999999999999 6778999999999987765432
Q ss_pred eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 867 VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 867 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... .+.........
T Consensus 245 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-----~~~~--------~i~~~~~~~~~ 309 (373)
T 2x4f_A 245 --LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-----ETLN--------NILACRWDLED 309 (373)
T ss_dssp --CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH--------HHHHTCCCSCS
T ss_pred --cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHH--------HHHhccCCCCh
Confidence 23456999999999999889999999999999999999999999763221 1111 11111110000
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
. .....+..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 310 ~----~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~ 345 (373)
T 2x4f_A 310 E----EFQDISEEAKEFISKLLIKEKSWRISASEALKHPW 345 (373)
T ss_dssp G----GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred h----hhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcC
Confidence 0 01123567899999999999999999999998643
No 105
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.1e-39 Score=357.13 Aligned_cols=261 Identities=25% Similarity=0.386 Sum_probs=196.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+.. ..||||+++... ....+.+.+|++++++++||||+++++++.... .+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 95 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ-----LA 95 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS-----CE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCc-----cE
Confidence 467999999999999999999865 359999987543 344577899999999999999999999775443 46
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 96 IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp EEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccc
Confidence 999999999999999877777999999999999999999999 89999999999999999999999999999986654
Q ss_pred CCceeeeccCCCCcccccccccC---CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGS---EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...........||+.|+|||++. +..++.++||||+||++|||++|+.||....... ........... .
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~~----~ 244 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD----QIIEMVGRGSL----S 244 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH----HHHHHHHHTSC----C
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH----HHHHHhccccc----C
Confidence 33322334557899999999876 5678999999999999999999999997643221 11111111100 0
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
..... ....++..+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus 245 ~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 245 PDLSK-------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CCTTS-------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cchhh-------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 00000 012345679999999999999999999999999998864
No 106
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=7.7e-40 Score=362.85 Aligned_cols=262 Identities=24% Similarity=0.386 Sum_probs=213.5
Q ss_pred hcCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeecccc-hhHHHHHHHHHHHHhc-cCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQCG-RAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 776 (1002)
.++|+..+.||+|+||+||+|+. .+++.||||++..... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~- 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG- 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC-
Confidence 45789999999999999999974 3578899999976543 3457789999999999 9999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCC-----------------cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCC
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNY-----------------ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~-----------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~ 839 (1002)
..++||||+++|+|.+++..... .+++..++.++.||++||+||| +++|+||||||+
T Consensus 101 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~ 174 (313)
T 1t46_A 101 ---PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAAR 174 (313)
T ss_dssp ---SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGG
T ss_pred ---CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccc
Confidence 55799999999999999976542 4899999999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccc
Q 037042 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNE 918 (1002)
Q Consensus 840 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~ 918 (1002)
||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 254 (313)
T 1t46_A 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254 (313)
T ss_dssp GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch
Confidence 99999999999999999987765544333445567889999999888899999999999999999999 99998764322
Q ss_pred cccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 919 GMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
.. ...... ...... .+..++..+.+++.+||+.+|++|||+.|++++|+++-...
T Consensus 255 ~~-~~~~~~--------~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 255 SK-FYKMIK--------EGFRML----------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp HH-HHHHHH--------HTCCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred hH-HHHHhc--------cCCCCC----------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 11 111100 000000 01123467899999999999999999999999999886543
No 107
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.7e-39 Score=378.52 Aligned_cols=329 Identities=22% Similarity=0.227 Sum_probs=268.6
Q ss_pred CccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCC
Q 037042 272 PNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYL 351 (1002)
Q Consensus 272 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L 351 (1002)
++++.|+|++|++++..|..|.++++|++|+|++|.|+++.|..|+++++|++|+|++|+++.++.. .|.++++|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L 106 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLG-----VFTGLSNL 106 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTT-----SSTTCTTC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcc-----cccCCCCC
Confidence 4677777788888777777888888888888888888888788888888888888888888877654 26667777
Q ss_pred cEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEcc
Q 037042 352 EFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFP 431 (1002)
Q Consensus 352 ~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 431 (1002)
++|+|++|.+.+ ..|..|..+++|++|+|++|++++..+..|.++++|+.|+|+
T Consensus 107 ~~L~Ls~n~i~~--------------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 160 (477)
T 2id5_A 107 TKLDISENKIVI--------------------------LLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLE 160 (477)
T ss_dssp CEEECTTSCCCE--------------------------ECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEE
T ss_pred CEEECCCCcccc--------------------------CChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECC
Confidence 777777666543 345677888888888888888888888888888889999999
Q ss_pred CCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCC
Q 037042 432 DNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPL 511 (1002)
Q Consensus 432 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 511 (1002)
+|++++..+..+..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|.......+|+.|++++|++++..
T Consensus 161 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 240 (477)
T 2id5_A 161 KCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVP 240 (477)
T ss_dssp SCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCC
T ss_pred CCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccC
Confidence 88888776677888888999999999888888888888899999999988877777776666678999999999998766
Q ss_pred cccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCC
Q 037042 512 PLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLS 591 (1002)
Q Consensus 512 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 591 (1002)
+..+..+++|+.|+|++|.+++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..++
T Consensus 241 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 320 (477)
T 2id5_A 241 YLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVG 320 (477)
T ss_dssp HHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGG
T ss_pred HHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCc
Confidence 67788999999999999999988888899999999999999999988899999999999999999999987777888999
Q ss_pred ccceeeCCCCcCcccCCCCCCCCCCccccccCCCCCCCCC
Q 037042 592 YLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSP 631 (1002)
Q Consensus 592 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 631 (1002)
+|+.|+|++|+|++..+....+.......+.++...|..|
T Consensus 321 ~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 321 NLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp GCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred ccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 9999999999998876543322223334566777777655
No 108
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=8.9e-40 Score=357.64 Aligned_cols=270 Identities=20% Similarity=0.231 Sum_probs=202.6
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
++|+..+.||+|+||+||+|+..+|+.||||++.... ......+.+|++++++++||||+++++++...+ ..++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~l 77 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK----RLVL 77 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS----CEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCC----eEEE
Confidence 4688999999999999999998889999999986543 223467889999999999999999999998766 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||+++ +|.+++......+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 78 VFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp EEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred EEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 9999976 999999876667899999999999999999999 899999999999999999999999999999876533
Q ss_pred CceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh---hhhc--
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS---IMKI-- 937 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~~i-- 937 (1002)
.. ......||+.|+|||++.+. .++.++||||+||++|||++|+.||....... .+........... ...+
T Consensus 154 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T 1ob3_A 154 VR--KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTE 230 (288)
T ss_dssp ----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGG
T ss_pred cc--ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhc
Confidence 21 22345689999999988664 58999999999999999999999997642211 1111111100000 0000
Q ss_pred ---ccCccCChh-hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 938 ---VDGSLLSRE-DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 938 ---~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.++...... ..........+..+.+++.+||+.||++|||++|+++|-+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 283 (288)
T 1ob3_A 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283 (288)
T ss_dssp STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 000000000 0000011224567889999999999999999999998743
No 109
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1e-39 Score=364.55 Aligned_cols=262 Identities=20% Similarity=0.208 Sum_probs=209.4
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++..++ ..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~----~~~ 81 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK----YNA 81 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT----EEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC----ccE
Confidence 46799999999999999999985 5799999999875432 24578899999999 9999999999998766 557
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc-----EEEeccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV-----AHLSDFGIT 857 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~-----~kl~DfGla 857 (1002)
+||||+ +++|.+++...+..+++..++.++.||+.||+||| +.+|+||||||+||+++.++. +||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred EEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 999999 99999999876667999999999999999999999 889999999999999998887 999999999
Q ss_pred ccccCCCcee-----eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 858 KLLTREDQFV-----TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 858 ~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
+.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~--~~~~~~~~i~~~ 235 (330)
T 2izr_A 158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD--TLKERYQKIGDT 235 (330)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS--SHHHHHHHHHHH
T ss_pred eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc--cHHHHHHHHHhh
Confidence 8765433211 124567999999999999999999999999999999999999999874322 121111111000
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
... ... ......++ .+.+++.+||+.+|.+||++.++.+.|+++..
T Consensus 236 ~~~--------~~~---~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 236 KRA--------TPI---EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp HHH--------SCH---HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred hcc--------CCH---HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 000 000 00011133 79999999999999999999999999988764
No 110
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.2e-39 Score=355.22 Aligned_cols=257 Identities=25% Similarity=0.401 Sum_probs=197.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|+..+.||+|+||+||+|+.. .+..||+|++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 88 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN----- 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccC-----
Confidence 457889999999999999999864 25679999987543 33457788999999999999999999998543
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++...+..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 89 PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred ccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccc
Confidence 346999999999999999877667999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||....... ... .+.
T Consensus 166 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~-----------~i~ 231 (281)
T 1mp8_A 166 MEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIG-----------RIE 231 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHH-----------HHH
T ss_pred cCccccc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHH-----------HHH
Confidence 6543321 2233456788999999988899999999999999999997 999997643221 111 111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... .+..++..+.+++.+||+.+|++|||+.|++++|+++.+
T Consensus 232 ~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 232 NGERLP-------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp TTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCC-------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 111000 112345678899999999999999999999999998754
No 111
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.2e-39 Score=353.42 Aligned_cols=251 Identities=26% Similarity=0.410 Sum_probs=193.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc----chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC----GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||+||+|+.. |+.||||++.... ....+.+.+|+++++.++||||+++++++...+ .
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 80 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP----N 80 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC------
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC----c
Confidence 357889999999999999999875 8899999986542 223567889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCC---cEEccCCCCCeeeCC--------CCcE
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP---VIHCDLKPSNVLLGD--------NMVA 849 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~---iiHrDlkp~NILl~~--------~~~~ 849 (1002)
.++||||+++++|.+++... .+++..+..++.|+++|++||| +++ |+||||||+||+++. ++.+
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~ 155 (271)
T 3dtc_A 81 LCLVMEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKIL 155 (271)
T ss_dssp CEEEEECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCE
T ss_pred eEEEEEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcce
Confidence 68999999999999998643 5899999999999999999999 666 999999999999986 7789
Q ss_pred EEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH
Q 037042 850 HLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW 929 (1002)
Q Consensus 850 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 929 (1002)
||+|||+++....... ....||+.|+|||++.+..++.++||||||+++|||++|+.||........ ..
T Consensus 156 kl~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-----~~-- 224 (271)
T 3dtc_A 156 KITDFGLAREWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV-----AY-- 224 (271)
T ss_dssp EECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH-----HH--
T ss_pred EEccCCcccccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HH--
Confidence 9999999986654322 245689999999999888899999999999999999999999976422111 00
Q ss_pred HhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 930 LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 930 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
.+........ .+..++..+.+++.+||+.+|++|||+.|++++|+++
T Consensus 225 ------~~~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 225 ------GVAMNKLALP------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ------HHHTSCCCCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ------hhhcCCCCCC------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0000100000 1123456789999999999999999999999999864
No 112
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.3e-39 Score=357.06 Aligned_cols=271 Identities=21% Similarity=0.224 Sum_probs=204.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++..++ ..+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~ 77 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK----KLT 77 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT----EEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC----EEE
Confidence 46889999999999999999865 68999999997543 334577889999999999999999999998766 567
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++ ++.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 78 lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 78 LVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp EEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred EEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 99999976 676666665567999999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCCCC-cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh------hh
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGR-VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS------IM 935 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~------~~ 935 (1002)
... ......||+.|+|||++.+.. ++.++||||+||++|||++|..||.........+........... ..
T Consensus 154 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 231 (292)
T 3o0g_A 154 PVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231 (292)
T ss_dssp CCS--CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred ccc--cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhc
Confidence 322 224557899999999987765 899999999999999999998886543222222222221111000 00
Q ss_pred hcccCccCC--h-hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 936 KIVDGSLLS--R-EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 936 ~i~~~~~~~--~-~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+..+..... . ...........+..+.+++.+|++.||++|||++|+++|-+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 285 (292)
T 3o0g_A 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285 (292)
T ss_dssp GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcc
Confidence 000000000 0 00000011224567889999999999999999999998743
No 113
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1e-39 Score=353.00 Aligned_cols=258 Identities=29% Similarity=0.441 Sum_probs=212.2
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv 81 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA----PICLV 81 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----SCEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC----CeEEE
Confidence 356888999999999999999988889999999986543 3467899999999999999999999998766 56799
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCC
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRED 864 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 864 (1002)
|||+++++|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 158 (267)
T 3t9t_A 82 TEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 158 (267)
T ss_dssp ECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred EeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc
Confidence 9999999999999877667899999999999999999999 8999999999999999999999999999998764322
Q ss_pred ceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccC
Q 037042 865 QFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 865 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
........+|..|+|||+..+..++.++||||+|+++|||++ |+.||...... ..... +......
T Consensus 159 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~--------i~~~~~~ 224 (267)
T 3t9t_A 159 -YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVED--------ISTGFRL 224 (267)
T ss_dssp -HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHH--------HHTTCCC
T ss_pred -ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH-----HHHHH--------HhcCCcC
Confidence 112234567888999999988889999999999999999999 89998763221 11111 1111000
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
. .+..++..+.+++.+||+.+|++|||+.|++++|+++.+.
T Consensus 225 ~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 225 Y-------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp C-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C-------CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0 0112345688999999999999999999999999998753
No 114
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.2e-40 Score=377.87 Aligned_cols=260 Identities=20% Similarity=0.230 Sum_probs=207.2
Q ss_pred HHHHhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCc
Q 037042 700 ELCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGD 775 (1002)
Q Consensus 700 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 775 (1002)
++....++|+..+.||+|+||+||+|+.. +++.||+|++.+.. ......+.+|+++++.++|||||++++++...+
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 34445678999999999999999999865 68999999997532 122345788999999999999999999998776
Q ss_pred hhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccc
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 855 (1002)
..++||||+++|+|.+++... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||
T Consensus 143 ----~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG 213 (410)
T 3v8s_A 143 ----YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFG 213 (410)
T ss_dssp ----EEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ----EEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccc
Confidence 568999999999999999764 4899999999999999999999 8999999999999999999999999999
Q ss_pred ccccccCCCceeeeccCCCCcccccccccCCCC----cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh
Q 037042 856 ITKLLTREDQFVTQTQTPATIGYMALEYGSEGR----VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL 931 (1002)
Q Consensus 856 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 931 (1002)
+|+....... ......+||+.|+|||++.+.. |+.++|||||||++|||++|+.||...... ........
T Consensus 214 ~a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-----~~~~~i~~ 287 (410)
T 3v8s_A 214 TCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-----GTYSKIMN 287 (410)
T ss_dssp TCEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHHHT
T ss_pred eeEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-----hHHHHHHh
Confidence 9987665432 2234568999999999887654 889999999999999999999999753221 11111000
Q ss_pred hhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCC--CCCHHHHHHHHH
Q 037042 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEK--RINAKEIVTRLL 986 (1002)
Q Consensus 932 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rpt~~evl~~L~ 986 (1002)
.. ..+ ..+ .....+..+.+++.+||..+|.+ ||+++|+++|-+
T Consensus 288 ~~-~~~-----~~p------~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~ 332 (410)
T 3v8s_A 288 HK-NSL-----TFP------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 332 (410)
T ss_dssp HH-HHC-----CCC------TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGG
T ss_pred cc-ccc-----cCC------CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCcc
Confidence 00 000 000 00123466889999999999998 999999999965
No 115
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.3e-40 Score=367.59 Aligned_cols=258 Identities=24% Similarity=0.406 Sum_probs=204.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcE----EEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGME----VAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
.++|+..+.||+|+||+||+|++. +++. ||+|++.... ......+.+|+.++++++||||+++++++....
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--- 88 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS--- 88 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSS---
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCc---
Confidence 357889999999999999999854 4544 7788775432 233456778999999999999999999986443
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
.++||||+++|+|.+++...+..+++..+..++.||++||+||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 89 --~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 89 --LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp --EEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred --cEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCccc
Confidence 46999999999999999877667899999999999999999999 8899999999999999999999999999999
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
...............+|..|+|||++.+..++.++|||||||++|||++ |+.||....... ....+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~---------- 231 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--VPDLLE---------- 231 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--HHHHHH----------
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--HHHHHH----------
Confidence 8765544434455678889999999988899999999999999999999 999997643221 111100
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... .+..++..+.+++.+||..+|++|||+.|++++|+++..
T Consensus 232 -~~~~~~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 232 -KGERLA-------QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp -TTCBCC-------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred -cCCCCC-------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 000000 011133457889999999999999999999999998753
No 116
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.7e-39 Score=362.17 Aligned_cols=256 Identities=20% Similarity=0.271 Sum_probs=204.3
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|+..+.||+|+||.||+|+.. +++.||+|++.+.. ....+.+.+|+.+++++ +||||+++++++...+ .
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~----~ 84 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES----R 84 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----E
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC----E
Confidence 56899999999999999999865 68999999998642 23456788899999988 8999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 85 LFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp EEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 689999999999999997654 4899999999999999999999 899999999999999999999999999999864
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc---cHHHHHHHHHhhhhhhc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM---TLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~---~~~~~~~~~~~~~~~~i 937 (1002)
..... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||........ ........ .+
T Consensus 161 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-------~i 231 (345)
T 3a8x_A 161 LRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ-------VI 231 (345)
T ss_dssp CCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHH-------HH
T ss_pred cCCCC--cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHH-------HH
Confidence 33221 22456799999999999999999999999999999999999999975322111 00111100 11
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH------HHHHHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA------KEIVTRLL 986 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~------~evl~~L~ 986 (1002)
....... +...+..+.+++.+||+.||++||++ .|+++|-.
T Consensus 232 ~~~~~~~--------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~ 278 (345)
T 3a8x_A 232 LEKQIRI--------PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 278 (345)
T ss_dssp HHCCCCC--------CTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGG
T ss_pred HcCCCCC--------CCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCc
Confidence 1111111 11234568899999999999999995 78887743
No 117
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.3e-39 Score=378.76 Aligned_cols=254 Identities=28% Similarity=0.423 Sum_probs=208.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|++. |+.||||+++... ..+.+.+|+++|++++||||+++++++...+. ..++|
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~iv 265 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIV 265 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS---CEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC---ceEEE
Confidence 457888899999999999999886 7899999997653 45788999999999999999999999865431 34799
Q ss_pred hccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++|+|.+++...+. .+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++.....
T Consensus 266 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp EECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 999999999999987654 4689999999999999999999 899999999999999999999999999999854432
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
. ....+|..|+|||++.+..++.++|||||||++|||++ |+.||....... ... .+..+..
T Consensus 343 ~-----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~-----------~i~~~~~ 404 (450)
T 1k9a_A 343 Q-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVP-----------RVEKGYK 404 (450)
T ss_dssp ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHH-----------HHHTTCC
T ss_pred c-----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH-----------HHHcCCC
Confidence 1 22356888999999999999999999999999999998 999997643221 111 1111110
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
. ..+..++..+.++|.+||+.+|++|||+.++++.|+++...+
T Consensus 405 ~-------~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 405 M-------DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp C-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred C-------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 0 112345678999999999999999999999999999998654
No 118
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.5e-39 Score=356.07 Aligned_cols=264 Identities=14% Similarity=0.130 Sum_probs=211.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+. .+|+.||||++.... ..+.+.+|+++++++ +|+||+++++++.... ..+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~----~~~ 82 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL----HNV 82 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETT----EEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCc----eeE
Confidence 45799999999999999999985 579999999987543 234578899999999 7999999999987766 557
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc-----EEEeccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV-----AHLSDFGIT 857 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~-----~kl~DfGla 857 (1002)
+||||+ +++|.+++...+..+++..+..++.||++||+||| +++|+||||||+||+++.++. +||+|||++
T Consensus 83 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 83 LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 999999 99999999877667999999999999999999999 999999999999999987776 999999999
Q ss_pred ccccCCCce-----eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 858 KLLTREDQF-----VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 858 ~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
+........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~ 236 (298)
T 1csn_A 159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN--KQKYERIGEK 236 (298)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--HHHHHHHHHH
T ss_pred cccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--HHHHHHHHhh
Confidence 877554321 122455799999999999999999999999999999999999999977432211 1111100000
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
... .. .......++..+.+++.+||+.+|++||+++++++.|+++...
T Consensus 237 ~~~--------~~---~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 237 KQS--------TP---LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HHH--------SC---HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ccC--------cc---HHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 000 00 0001123456799999999999999999999999999998754
No 119
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=357.17 Aligned_cols=254 Identities=23% Similarity=0.274 Sum_probs=198.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc--------------------------hhHHHHHHHHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG--------------------------RAFKSFDVECEVMK 757 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 757 (1002)
.++|+..+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 467999999999999999999854 689999999875421 12356889999999
Q ss_pred hccCCCcceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCC
Q 037042 758 SIRHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLK 837 (1002)
Q Consensus 758 ~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlk 837 (1002)
+++||||+++++++...... ..++||||+++|+|.+++... .+++..+..++.||++||+||| +.+|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~--~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNED--HLYMVFELVNQGPVMEVPTLK--PLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSS--EEEEEEECCTTCBSCCSSCSS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCC--EEEEEEecCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCC
Confidence 99999999999998763211 457999999999999876443 5899999999999999999999 8899999999
Q ss_pred CCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCC---cCcccchHHHHHHHHHHHhCCCCCcc
Q 037042 838 PSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGR---VSTNGDVYNFGVMLMETFTGKKPTNE 914 (1002)
Q Consensus 838 p~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGv~l~elltg~~P~~~ 914 (1002)
|+||+++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||..
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred HHHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 9999999999999999999987765432 224567999999999987655 47889999999999999999999975
Q ss_pred cccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 915 IFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... ..+...... ....... ...++..+.+++.+||+.||++|||+.|+++|-+
T Consensus 243 ~~~-----~~~~~~~~~--------~~~~~~~------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~ 295 (298)
T 2zv2_A 243 ERI-----MCLHSKIKS--------QALEFPD------QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295 (298)
T ss_dssp SSH-----HHHHHHHHH--------CCCCCCS------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHH
T ss_pred ccH-----HHHHHHHhc--------ccCCCCC------ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcc
Confidence 321 111111110 0000000 0123456889999999999999999999998743
No 120
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.6e-39 Score=364.48 Aligned_cols=248 Identities=20% Similarity=0.218 Sum_probs=206.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||++.+.. ....+.+.+|++++++++||||+++++++...+ .
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~ 115 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS----N 115 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----E
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC----E
Confidence 357899999999999999999865 69999999997542 234567889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++..
T Consensus 116 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~ 191 (350)
T 1rdq_E 116 LYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceec
Confidence 689999999999999998754 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... ...+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+... .+..+
T Consensus 192 ~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~--------~i~~~ 253 (350)
T 1rdq_E 192 KGRT-----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-----IQIYE--------KIVSG 253 (350)
T ss_dssp SSCB-----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH--------HHHHC
T ss_pred cCCc-----ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-----HHHHH--------HHHcC
Confidence 5432 345689999999999999999999999999999999999999975321 11111 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-----HHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-----AKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~evl~~L~ 986 (1002)
.... +...+..+.+++.+||+.||.+||+ ++|+++|-+
T Consensus 254 ~~~~--------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~ 296 (350)
T 1rdq_E 254 KVRF--------PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296 (350)
T ss_dssp CCCC--------CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred CCCC--------CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcC
Confidence 1111 1123466889999999999999998 999998754
No 121
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=364.19 Aligned_cols=250 Identities=22% Similarity=0.301 Sum_probs=202.8
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|++.+.||+|+||.||+|+.. +++.||+|++.+.. ......+.+|++++++++|||||++++++...+ ..
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~----~~ 90 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE----DM 90 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----EE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC----EE
Confidence 57999999999999999999865 68899999997542 234567889999999999999999999998776 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+.
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 91 FMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp EEEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 79999999999999998654 4899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCC---CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSE---GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
.... ....+||+.|+|||++.. ..|+.++||||+||++|||++|+.||...... ...........
T Consensus 167 ~~~~---~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~--~~~~~~~~~~~------- 234 (384)
T 4fr4_A 167 RETQ---ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST--SSKEIVHTFET------- 234 (384)
T ss_dssp TTCC---BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS--CHHHHHHHHHH-------
T ss_pred CCCc---eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc--cHHHHHHHHhh-------
Confidence 4332 245679999999998863 45899999999999999999999999753222 11111111100
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-HHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-AKEIVTR 984 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-~~evl~~ 984 (1002)
..... +...+..+.+++.+||+.+|++||+ ++++.+|
T Consensus 235 -~~~~~--------p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 235 -TVVTY--------PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp -CCCCC--------CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred -cccCC--------CCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 00000 1123467899999999999999998 7777664
No 122
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.6e-39 Score=370.04 Aligned_cols=277 Identities=16% Similarity=0.199 Sum_probs=206.4
Q ss_pred hcCCCCCceeecc--CcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRG--GFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|++.+.||+| +||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 99 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN---- 99 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC----
Confidence 4579999999999 99999999865 79999999997543 334577888999999999999999999998776
Q ss_pred HHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
..++||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||.+.
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~ 176 (389)
T 3gni_B 100 ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNL 176 (389)
T ss_dssp EEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccce
Confidence 5689999999999999997652 35899999999999999999999 8999999999999999999999999999987
Q ss_pred cccCCCce-----eeeccCCCCcccccccccCC--CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh
Q 037042 859 LLTREDQF-----VTQTQTPATIGYMALEYGSE--GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL 931 (1002)
Q Consensus 859 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 931 (1002)
........ .......||..|+|||++.+ ..|+.++||||+||++|||++|+.||......... .........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~ 255 (389)
T 3gni_B 177 SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML-LEKLNGTVP 255 (389)
T ss_dssp ECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH-HHC------
T ss_pred eeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH-HHHhcCCCC
Confidence 65332211 11233478999999999877 57999999999999999999999999764332211 110000000
Q ss_pred ----------hh-------------hhhcc---cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH-
Q 037042 932 ----------IS-------------IMKIV---DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR- 984 (1002)
Q Consensus 932 ----------~~-------------~~~i~---~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~- 984 (1002)
.. ..... ..............+...+..+.+++.+||+.||++|||+.|+++|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp 335 (389)
T 3gni_B 256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS 335 (389)
T ss_dssp --------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSG
T ss_pred ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCH
Confidence 00 00000 0000000000011223345679999999999999999999999988
Q ss_pred -HHhhc
Q 037042 985 -LLKIN 989 (1002)
Q Consensus 985 -L~~i~ 989 (1002)
+++++
T Consensus 336 ~f~~~~ 341 (389)
T 3gni_B 336 FFKQIK 341 (389)
T ss_dssp GGGGC-
T ss_pred HHHHHh
Confidence 44443
No 123
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=364.60 Aligned_cols=286 Identities=23% Similarity=0.263 Sum_probs=202.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHH--HHhccCCCcceeeeEEecCch-hhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEV--MKSIRHRNIIKIISCCSIGDF-KALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~~~~-~~~~~ 781 (1002)
.++|+..+.||+|+||+||+|+. +++.||||++.... ...+..|.++ ++.++||||+++++++..... .....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46799999999999999999976 58999999997543 2333444444 555899999999986543211 11134
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCC---------CcEEccCCCCCeeeCCCCcEEEe
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST---------PVIHCDLKPSNVLLGDNMVAHLS 852 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~---------~iiHrDlkp~NILl~~~~~~kl~ 852 (1002)
++||||+++|+|.+++.... .++..+..++.||++||+||| +. +|+||||||+|||++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 69999999999999997654 588899999999999999999 77 99999999999999999999999
Q ss_pred cccccccccCCCc------eeeeccCCCCcccccccccCC-------CCcCcccchHHHHHHHHHHHhCCCCCccccccc
Q 037042 853 DFGITKLLTREDQ------FVTQTQTPATIGYMALEYGSE-------GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG 919 (1002)
Q Consensus 853 DfGla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~ 919 (1002)
|||+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999987654321 112234579999999999876 457789999999999999999988765432211
Q ss_pred ccHHHHHHHHHh----hhhhhcccCccCChh-hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 920 MTLKHWVNDWLL----ISIMKIVDGSLLSRE-DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 920 ~~~~~~~~~~~~----~~~~~i~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
.....+...... ............... .........++..+.+++.+||+.||++|||++|+++.|+++...+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~ 322 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER 322 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence 100000000000 000000000000000 000001224567899999999999999999999999999999988887
Q ss_pred CCCCC
Q 037042 995 GYPSY 999 (1002)
Q Consensus 995 ~~~~y 999 (1002)
...++
T Consensus 323 ~~~~~ 327 (336)
T 3g2f_A 323 NKSVS 327 (336)
T ss_dssp -----
T ss_pred cccCC
Confidence 76654
No 124
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=6.2e-40 Score=365.90 Aligned_cols=276 Identities=24% Similarity=0.326 Sum_probs=213.7
Q ss_pred cCCCCCceeeccCcceEEEEEe-----CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-----QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+.. .
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~--~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ--S 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC--E
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc--e
Confidence 5788999999999999999984 36889999999877666677899999999999999999999988643322 3
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceec
Confidence 46999999999999999876667999999999999999999999 899999999999999999999999999999877
Q ss_pred cCCCcee-eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH-Hhhhhhhcc
Q 037042 861 TREDQFV-TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW-LLISIMKIV 938 (1002)
Q Consensus 861 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~-~~~~~~~i~ 938 (1002)
....... ......||..|+|||++.+..++.++|||||||++|||++|+.||.....+......+.... ......+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence 5443322 22345688899999999888899999999999999999999999876432210000000000 000011111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
...... ..+..++..+.+++.+||+.+|++|||+.|++++|+++....
T Consensus 258 ~~~~~~------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 258 EEGQRL------PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HTTCCC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred hcccCC------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 110000 012234567899999999999999999999999999886543
No 125
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.1e-39 Score=361.14 Aligned_cols=251 Identities=22% Similarity=0.319 Sum_probs=195.9
Q ss_pred hcCCCCCceeeccCcceEEEEEe----CCCcEEEEEEeeccc----chhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI----QDGMEVAVKVFNQQC----GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
.++|+..+.||+|+||.||+|+. .+|+.||+|++++.. ......+.+|++++++++||||+++++++...+
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG- 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC-
Confidence 45799999999999999999986 478999999997642 223456788999999999999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccc
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGI 856 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 856 (1002)
..++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 95 ---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 95 ---KLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp ---CEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred ---EEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 5689999999999999997654 4889999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... .
T Consensus 168 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~--------~ 232 (327)
T 3a62_A 168 CKESIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-----KTID--------K 232 (327)
T ss_dssp C------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHH--------H
T ss_pred ccccccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-----HHHH--------H
Confidence 976543221 224457999999999999889999999999999999999999999763221 1111 1
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHHH
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRLL 986 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L~ 986 (1002)
+....... +...+..+.+++.+||..+|++|| ++.|+++|-+
T Consensus 233 i~~~~~~~--------p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~ 279 (327)
T 3a62_A 233 ILKCKLNL--------PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279 (327)
T ss_dssp HHHTCCCC--------CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGG
T ss_pred HHhCCCCC--------CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCc
Confidence 11111111 112346688999999999999999 7889998744
No 126
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.9e-40 Score=374.68 Aligned_cols=270 Identities=21% Similarity=0.240 Sum_probs=211.2
Q ss_pred HHHHHHhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEec
Q 037042 698 YLELCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773 (1002)
Q Consensus 698 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 773 (1002)
+.+.....++|+..+.||+|+||+||+|+.. +|+.||||++++.. ......+.+|++++..++||||+++++++..
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3344455688999999999999999999865 79999999997532 2233457889999999999999999999987
Q ss_pred CchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEec
Q 037042 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSD 853 (1002)
Q Consensus 774 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 853 (1002)
.+ ..++||||+++|+|.+++.+.+..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 133 ~~----~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 133 EN----YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp SS----EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECC
T ss_pred CC----EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEee
Confidence 76 568999999999999999876656999999999999999999999 89999999999999999999999999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccC-------CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHH
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGS-------EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWV 926 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~ 926 (1002)
||+++........ .....+||+.|+|||++. ...|+.++|||||||++|||++|+.||...... +..
T Consensus 206 FGla~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-----~~~ 279 (412)
T 2vd5_A 206 FGSCLKLRADGTV-RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA-----ETY 279 (412)
T ss_dssp CTTCEECCTTSCE-ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHH
T ss_pred chhheeccCCCcc-ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-----HHH
Confidence 9999877554322 223468999999999876 456899999999999999999999999763221 111
Q ss_pred HHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCC---CCHHHHHHHHHhhcccCC
Q 037042 927 NDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKR---INAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 927 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R---pt~~evl~~L~~i~~~~~ 993 (1002)
....... .. ...+. .+...+..+.+++.+||. +|++| |+++|+++|-. +++.++
T Consensus 280 ~~i~~~~-~~-----~~~p~-----~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpf-f~~i~w 336 (412)
T 2vd5_A 280 GKIVHYK-EH-----LSLPL-----VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPF-FFGLDW 336 (412)
T ss_dssp HHHHTHH-HH-----CCCC---------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGG-GTTCCS
T ss_pred HHHHhcc-cC-----cCCCc-----cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCC-cCCCCH
Confidence 1100000 00 00000 012245678999999999 99998 59999999855 333333
No 127
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5.2e-40 Score=363.68 Aligned_cols=272 Identities=19% Similarity=0.319 Sum_probs=204.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||+||+|+. .+++.||||++.... ......+.+|++++++++||||+++++++.........
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46799999999999999999985 578999999997642 23456788999999999999999999998765532222
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+ .+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 379999999999999997655 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCce-eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQF-VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ... ....
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-----~~~--------~~~~ 233 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-----VAY--------QHVR 233 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHH--------HHHH
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-----HHH--------HHhc
Confidence 543322 12234568999999999998899999999999999999999999997632211 110 0111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHH-HHHHhhcccCCCCCC
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV-TRLLKINDLDFNGYP 997 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl-~~L~~i~~~~~~~~~ 997 (1002)
...... ......++..+.+++.+||+.||++||++.+++ +.+.++......+.|
T Consensus 234 ~~~~~~----~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~ 288 (311)
T 3ork_A 234 EDPIPP----SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288 (311)
T ss_dssp CCCCCH----HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCCSSC
T ss_pred CCCCCc----ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCCCCC
Confidence 111111 011123456789999999999999999766555 556666655555544
No 128
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2e-39 Score=363.56 Aligned_cols=251 Identities=21% Similarity=0.262 Sum_probs=204.7
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhh
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 778 (1002)
..++|+..+.||+|+||.||+|+.. +|+.||||++++.. ......+..|.++++.+ +||+|+++++++...+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--- 94 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--- 94 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS---
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC---
Confidence 3468999999999999999999876 48899999997642 23456788899999988 7999999999998776
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
..++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++
T Consensus 95 -~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 95 -RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred -EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence 5679999999999999998654 4899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||...... +... .+.
T Consensus 170 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-----~~~~--------~i~ 234 (353)
T 2i0e_A 170 ENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----ELFQ--------SIM 234 (353)
T ss_dssp CCCCTTC--CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HHH
T ss_pred ccccCCc--ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH-----HHHH--------HHH
Confidence 6433221 224567999999999999999999999999999999999999999753221 1111 111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-----HHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-----AKEIVTRL 985 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~evl~~L 985 (1002)
...... +...+..+.+++.+||..+|++||+ ++|+++|-
T Consensus 235 ~~~~~~--------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~ 278 (353)
T 2i0e_A 235 EHNVAY--------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 278 (353)
T ss_dssp HCCCCC--------CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSG
T ss_pred hCCCCC--------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCc
Confidence 111111 1123467889999999999999995 58888774
No 129
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.7e-39 Score=361.81 Aligned_cols=261 Identities=27% Similarity=0.424 Sum_probs=212.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC--------CCcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecC
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ--------DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIG 774 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 774 (1002)
.++|+..+.||+|+||+||+|+.. ++..||||++.... ......+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467899999999999999999853 46789999997653 33457788999999999 899999999999876
Q ss_pred chhhHHHHHhhccCCCCChhHhhhccCC---------------cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCC
Q 037042 775 DFKALFKALALEYMPHGSLEKYLYSSNY---------------ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839 (1002)
Q Consensus 775 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~ 839 (1002)
+ ..++||||+++|+|.+++..... .+++..++.++.||++||+||| +.+|+||||||+
T Consensus 114 ~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~ 186 (334)
T 2pvf_A 114 G----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAAR 186 (334)
T ss_dssp S----CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGG
T ss_pred C----ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccc
Confidence 6 56799999999999999986542 3889999999999999999999 899999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccc
Q 037042 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNE 918 (1002)
Q Consensus 840 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~ 918 (1002)
||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 187 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~- 265 (334)
T 2pvf_A 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV- 265 (334)
T ss_dssp GEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH-
T ss_pred eEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH-
Confidence 99999999999999999987765544434445567889999999888889999999999999999999 9999875322
Q ss_pred cccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 919 GMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
.+......... ... .+..++..+.+++.+||+.+|++|||+.|++++|+++....
T Consensus 266 ----~~~~~~~~~~~-----~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 266 ----EELFKLLKEGH-----RMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp ----HHHHHHHHHTC-----CCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHhcCC-----CCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 11111111000 000 01124467899999999999999999999999999987543
No 130
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=358.61 Aligned_cols=247 Identities=22% Similarity=0.250 Sum_probs=196.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
++|+..++||+|+||+||+|+.. +|+.||||++.... .........|+..+.++ +||||+++++++..++ ..
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~----~~ 132 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG----IL 132 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----EE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC----EE
Confidence 56999999999999999999876 79999999986542 22334455566666555 8999999999998776 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+ +++|.+++...+..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++....
T Consensus 133 ~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 133 YLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 7999999 66999998887777999999999999999999999 8899999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
.... .....||+.|+|||++.+ .++.++|||||||++|||++|..|+..... | ..+....
T Consensus 209 ~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-------~---------~~~~~~~ 268 (311)
T 3p1a_A 209 TAGA---GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-------W---------QQLRQGY 268 (311)
T ss_dssp ---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-------H---------HHHTTTC
T ss_pred cCCC---CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-------H---------HHHhccC
Confidence 4322 234568999999998775 789999999999999999999777644211 0 1111111
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.. . ..+..++..+.+++.+||+++|++|||++|+++|-+
T Consensus 269 ~~-~-----~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~ 307 (311)
T 3p1a_A 269 LP-P-----EFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPV 307 (311)
T ss_dssp CC-H-----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred CC-c-----ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCcc
Confidence 10 0 112234577999999999999999999999998743
No 131
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.2e-39 Score=379.43 Aligned_cols=258 Identities=24% Similarity=0.430 Sum_probs=204.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|++.++..||||+++... ...+.+.+|+++|++++||||+++++++... ..++|
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~iv 256 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-----PIYIV 256 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SCEEE
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcCC-----ceEEE
Confidence 35688889999999999999999888889999997653 2356789999999999999999999998753 34799
Q ss_pred hccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++|+|.+++.... ..+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++.....
T Consensus 257 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 333 (452)
T 1fmk_A 257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333 (452)
T ss_dssp ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred ehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence 99999999999997542 35899999999999999999999 899999999999999999999999999999876543
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. .......+|..|+|||++.++.++.++|||||||++|||++ |+.||...... +... .+..+..
T Consensus 334 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~--------~i~~~~~ 399 (452)
T 1fmk_A 334 EY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLD--------QVERGYR 399 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHH--------HHHTTCC
T ss_pred ce-ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHH--------HHHcCCC
Confidence 22 12234557889999999988899999999999999999999 99999753221 1111 1111100
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
. ..+..++..+.++|.+||+.+|++|||++++++.|+.+....
T Consensus 400 ~-------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 400 M-------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp C-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred C-------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 0 012235677899999999999999999999999999886543
No 132
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.5e-39 Score=382.41 Aligned_cols=257 Identities=26% Similarity=0.407 Sum_probs=211.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
..+|+..+.||+|+||+||+|++. ++..||||+++... ...+.+.+|+++|++++||||+++++++...+ ..++
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----~~~l 293 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP----PFYI 293 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----SCEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCC----cEEE
Confidence 346888899999999999999876 48899999997653 34578999999999999999999999998766 5679
Q ss_pred hhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 784 ALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
||||+++|+|.+++.... ..+++..++.++.||++||+||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 294 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 999999999999998643 36899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
... .......+|..|+|||++.+..++.++|||||||++|||++ |+.||....... ....+ ...
T Consensus 371 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--~~~~~------------~~~ 435 (495)
T 1opk_A 371 DTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELL------------EKD 435 (495)
T ss_dssp CCE-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHH------------HTT
T ss_pred Cce-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHH------------HcC
Confidence 332 22344567889999999988899999999999999999999 999987643221 11110 000
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
... ..+..++..+.++|.+||+.+|++|||+.|+++.|+.+..
T Consensus 436 ~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 436 YRM------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCC------CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 000 0122355778999999999999999999999999998753
No 133
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.4e-38 Score=357.59 Aligned_cols=280 Identities=21% Similarity=0.298 Sum_probs=216.9
Q ss_pred HHHHHHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHh--ccCCCcceeeeEEecCc
Q 037042 698 YLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKS--IRHRNIIKIISCCSIGD 775 (1002)
Q Consensus 698 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~ 775 (1002)
........++|+..+.||+|+||+||+|+.. |+.||||++... ....+.+|+++++. ++||||+++++++....
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 3334445678999999999999999999874 899999998754 34567788888887 68999999999987765
Q ss_pred hhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcC-----CCCCcEEccCCCCCeeeCCCCcEE
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG-----YSTPVIHCDLKPSNVLLGDNMVAH 850 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~iiHrDlkp~NILl~~~~~~k 850 (1002)
......++||||+++|+|.+++... .+++..++.++.|++.||+|||.. ++.+|+||||||+||+++.++.+|
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~k 187 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 187 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEE
T ss_pred CccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEE
Confidence 3222457999999999999999764 489999999999999999999932 157899999999999999999999
Q ss_pred EecccccccccCCCcee--eeccCCCCcccccccccCCC------CcCcccchHHHHHHHHHHHhC----------CCCC
Q 037042 851 LSDFGITKLLTREDQFV--TQTQTPATIGYMALEYGSEG------RVSTNGDVYNFGVMLMETFTG----------KKPT 912 (1002)
Q Consensus 851 l~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~elltg----------~~P~ 912 (1002)
|+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++| ..||
T Consensus 188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~ 267 (342)
T 1b6c_B 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 267 (342)
T ss_dssp ECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCc
Confidence 99999998776544322 22445799999999988765 344789999999999999999 7788
Q ss_pred cccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 913 NEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
............+....... ...+... ......++...+.+++.+||+.+|++|||+.|++++|+++.+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 268 YDLVPSDPSVEEMRKVVCEQ----KLRPNIP-----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp TTTSCSSCCHHHHHHHHTTS----CCCCCCC-----GGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cccCcCcccHHHHHHHHHHH----HhCCCCc-----ccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 76544433333333221111 1111111 11123456788999999999999999999999999999997653
No 134
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.2e-39 Score=361.01 Aligned_cols=255 Identities=22% Similarity=0.315 Sum_probs=200.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh----
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA---- 778 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~---- 778 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+.....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356899999999999999999875 79999999997543 345678999999999999999999999986643210
Q ss_pred -------------------------------------------------HHHHHhhccCCCCChhHhhhccCC--cCCHH
Q 037042 779 -------------------------------------------------LFKALALEYMPHGSLEKYLYSSNY--ILDIF 807 (1002)
Q Consensus 779 -------------------------------------------------~~~~lv~e~~~~g~L~~~l~~~~~--~l~~~ 807 (1002)
.+.++||||+++|+|.+++..... ..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 014699999999999999987543 45667
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce----------eeeccCCCCcc
Q 037042 808 QRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF----------VTQTQTPATIG 877 (1002)
Q Consensus 808 ~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~----------~~~~~~~gt~~ 877 (1002)
.++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++........ .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78999999999999999 899999999999999999999999999999877654221 12234579999
Q ss_pred cccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHH
Q 037042 878 YMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCM 957 (1002)
Q Consensus 878 y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 957 (1002)
|+|||++.+..++.++||||+||++|||++|..|+..... . ...+..... + .......
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~-------~--------~~~~~~~~~--~-----~~~~~~~ 299 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR-------I--------ITDVRNLKF--P-----LLFTQKY 299 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH-------H--------HHHHHTTCC--C-----HHHHHHC
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH-------H--------HHHhhccCC--C-----cccccCC
Confidence 9999999988999999999999999999999877533110 0 001111110 0 0122344
Q ss_pred HHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 958 SFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 958 ~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
..+.+++.+||+.||++|||+.|+++|
T Consensus 300 ~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 300 PQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 667899999999999999999999986
No 135
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.3e-39 Score=361.59 Aligned_cols=271 Identities=23% Similarity=0.378 Sum_probs=215.4
Q ss_pred cCHHHHHHhhcCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeecccc-hhHHHHHHHHHHHHhc-cCCCccee
Q 037042 696 FSYLELCQATDGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQCG-RAFKSFDVECEVMKSI-RHRNIIKI 767 (1002)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~ 767 (1002)
+...+.....++|+..+.||+|+||+||+|++ .+++.||||++..... .....+.+|+++++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 33444444567899999999999999999974 3568899999976533 3456788999999999 79999999
Q ss_pred eeEEecCchhhHHHHHhhccCCCCChhHhhhccCC---------------cCCHHHHHHHHHHHHHHHHHHHcCCCCCcE
Q 037042 768 ISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNY---------------ILDIFQRLNIMIDVASALEYLYFGYSTPVI 832 (1002)
Q Consensus 768 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~ii 832 (1002)
++++...+. ..++||||+++|+|.+++..... .+++..+..++.|+++||+||| +.+|+
T Consensus 97 ~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~ 170 (316)
T 2xir_A 97 LGACTKPGG---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCI 170 (316)
T ss_dssp EEEECCTTS---CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCC
T ss_pred EEEEecCCC---ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 999876431 35799999999999999987543 2789999999999999999999 89999
Q ss_pred EccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCC
Q 037042 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKP 911 (1002)
Q Consensus 833 HrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P 911 (1002)
||||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus 171 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p 250 (316)
T 2xir_A 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250 (316)
T ss_dssp CSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred cccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999987755444334445567889999999988899999999999999999998 9999
Q ss_pred CcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 912 TNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
|........ ........ .... .+..++..+.+++.+||+.+|.+|||+.|++++|+++...
T Consensus 251 ~~~~~~~~~----~~~~~~~~--------~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 251 YPGVKIDEE----FCRRLKEG--------TRMR-------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp STTCCCSHH----HHHHHHHT--------CCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcccchhHH----HHHHhccC--------ccCC-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 976432211 11110000 0000 0112345688999999999999999999999999988654
No 136
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.7e-39 Score=360.74 Aligned_cols=277 Identities=22% Similarity=0.359 Sum_probs=212.5
Q ss_pred CCCCceeeccCcceEEEEEeC-----CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 708 FSENNLIGRGGFGSVYKARIQ-----DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
|+..+.||+|+||+||++.+. +++.||||++.... ....+.+.+|++++++++||||+++++++...+.. ..
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~~ 110 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAA--SL 110 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTT--EE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCc--eE
Confidence 488899999999999998643 58899999998653 34467789999999999999999999999875322 34
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++.... +++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 69999999999999997654 899999999999999999999 8999999999999999999999999999998876
Q ss_pred CCCcee-eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHH-HHHHhhhhhhccc
Q 037042 862 REDQFV-TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWV-NDWLLISIMKIVD 939 (1002)
Q Consensus 862 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~-~~~~~~~~~~i~~ 939 (1002)
...... ......+|..|+|||++.+..++.++||||+||++|||++|+.||............+. .........+...
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 543322 23445688889999999888899999999999999999999999876432211000000 0000001111111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCCC
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGYP 997 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~~ 997 (1002)
...... .+..++..+.+++.+||+.+|++|||+.|+++.|+++.+......|
T Consensus 266 ~~~~~~------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~~p 317 (318)
T 3lxp_A 266 RGERLP------RPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAP 317 (318)
T ss_dssp TTCCCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC---
T ss_pred cccCCC------CCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccCCC
Confidence 111100 1123456799999999999999999999999999999877665554
No 137
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.2e-39 Score=359.58 Aligned_cols=271 Identities=23% Similarity=0.296 Sum_probs=191.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+.. +|+.||||+++... ......+.+|++++++++||||+++++++...+ ..+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~ 79 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTEN----KLT 79 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT----EEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECC----eEE
Confidence 467999999999999999999854 68999999997543 234467889999999999999999999998765 567
Q ss_pred HhhccCCCCChhHhhhccC-----CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 783 LALEYMPHGSLEKYLYSSN-----YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
+||||++ |+|.+++.... ..+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 80 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~ 155 (317)
T 2pmi_A 80 LVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLA 155 (317)
T ss_dssp EEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSC
T ss_pred EEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccc
Confidence 9999998 59999886542 25889999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--hh
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--SI 934 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~ 934 (1002)
+....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ............ ..
T Consensus 156 ~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~ 232 (317)
T 2pmi_A 156 RAFGIPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESL 232 (317)
T ss_dssp EETTSCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTT
T ss_pred eecCCCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhH
Confidence 87654322 2234578999999998876 468999999999999999999999997643221 111111110000 00
Q ss_pred ----hhcc--cCccC----C--hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 935 ----MKIV--DGSLL----S--REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 935 ----~~i~--~~~~~----~--~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+.. ..... . ........+...+..+.+++.+||+.||++|||+.|+++|-+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~ 296 (317)
T 2pmi_A 233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296 (317)
T ss_dssp CGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred hhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChh
Confidence 0000 00000 0 000000111224567899999999999999999999998843
No 138
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=359.91 Aligned_cols=271 Identities=21% Similarity=0.246 Sum_probs=210.6
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||.||+|+. .+|+.||||++........+.+.+|++++++++||||+++++++..........++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 45799999999999999999986 57999999998776666678899999999999999999999998743222224579
Q ss_pred hhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
||||+++|+|.+++.. .+..+++..++.++.||++||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999876 3446899999999999999999999 889999999999999999999999999998765
Q ss_pred cCCCce-------eeeccCCCCcccccccccCCCC---cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 861 TREDQF-------VTQTQTPATIGYMALEYGSEGR---VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 861 ~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
...... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...............
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~--- 261 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ--- 261 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH---
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh---
Confidence 321110 0012234789999999887554 789999999999999999999999764333222211111
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCCC
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNGY 996 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~~ 996 (1002)
. ..... ....++..+.+++.+||+.+|.+|||+.|++++|+++........
T Consensus 262 -----~----~~~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~~ 312 (317)
T 2buj_A 262 -----N----QLSIP------QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQH 312 (317)
T ss_dssp -----C----C--CC------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC--
T ss_pred -----c----cCCCC------ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCCC
Confidence 0 00000 011234678999999999999999999999999999987655543
No 139
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.1e-39 Score=363.19 Aligned_cols=263 Identities=24% Similarity=0.441 Sum_probs=212.2
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC------CCcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ------DGMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
..++|+..+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++...+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 101 (322)
T 1p4o_A 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ- 101 (322)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS-
T ss_pred hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC-
Confidence 4567999999999999999999754 378899999975432 34567889999999999999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccC---------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSN---------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM 847 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~ 847 (1002)
..++||||+++|+|.+++...+ ..+++..++.++.||+.||+||| +++|+||||||+||+++.++
T Consensus 102 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 102 ---PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp ---SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTC
T ss_pred ---ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCC
Confidence 5579999999999999997632 24688999999999999999999 88999999999999999999
Q ss_pred cEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHH
Q 037042 848 VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWV 926 (1002)
Q Consensus 848 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~ 926 (1002)
.+||+|||+++...............+|+.|+|||++.+..++.++||||+||++|||++ |+.||...... ...
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~ 250 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-----QVL 250 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-----HHH
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH-----HHH
Confidence 999999999987655443333344567889999999988889999999999999999999 88998653221 111
Q ss_pred HHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 927 NDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 927 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
.. +....... .+..++..+.+++.+||+.+|++|||+.|++++|+++.....
T Consensus 251 ~~--------~~~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~ 302 (322)
T 1p4o_A 251 RF--------VMEGGLLD-------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 302 (322)
T ss_dssp HH--------HHTTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTH
T ss_pred HH--------HHcCCcCC-------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCC
Confidence 11 11111110 012245678999999999999999999999999998765443
No 140
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.9e-39 Score=373.41 Aligned_cols=250 Identities=26% Similarity=0.359 Sum_probs=206.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|...+.||+|+||.||+|+.. +|+.||||++.+.. ......+.+|+.+++.++||||+++++++...+ .
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~----~ 90 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS----D 90 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----E
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----E
Confidence 357999999999999999999865 79999999997542 234567899999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 91 ~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~ 166 (476)
T 2y94_A 91 IFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 166 (476)
T ss_dssp EEEEEECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhc
Confidence 679999999999999997654 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
..... ....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... ... .++.+
T Consensus 167 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-----~~~--------~~i~~ 230 (476)
T 2y94_A 167 SDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-----TLF--------KKICD 230 (476)
T ss_dssp CTTCC---BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-----HHH--------HHHHT
T ss_pred ccccc---ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-----HHH--------HHHhc
Confidence 54432 234579999999999888765 78999999999999999999999763221 111 11112
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+....+ ...+..+.+++.+||+.||++|||+.|+++|-+
T Consensus 231 ~~~~~p--------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~ 269 (476)
T 2y94_A 231 GIFYTP--------QYLNPSVISLLKHMLQVDPMKRATIKDIREHEW 269 (476)
T ss_dssp TCCCCC--------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred CCcCCC--------ccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHH
Confidence 111111 123456889999999999999999999999855
No 141
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-39 Score=368.05 Aligned_cols=263 Identities=25% Similarity=0.434 Sum_probs=198.8
Q ss_pred CCCCCceeeccCcceEEEEEeC--CC--cEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ--DG--MEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.|+..+.||+|+||+||+|++. ++ ..||||+++... ....+.+.+|+.++++++||||+++++++...+. ..
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~---~~ 166 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SP 166 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS---CC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC---Ce
Confidence 3666789999999999999853 22 468999987543 3456789999999999999999999998754331 34
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++|+|.+++......+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 167 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccc
Confidence 6999999999999999877667899999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCce--eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 862 REDQF--VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 862 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
..... .......+|+.|+|||++.+..++.++|||||||++|||++ |.+||....... ....+ .
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~-----------~ 310 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYL-----------L 310 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHH-----------H
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHH-----------H
Confidence 43221 12234567889999999988899999999999999999999 677776532221 11111 1
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCC
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNG 995 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~ 995 (1002)
.+.... .+..++..+.+++.+||+.+|++|||+.|++++|+++......+
T Consensus 311 ~~~~~~-------~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 311 QGRRLL-------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp TTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred cCCCCC-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 111000 11234567899999999999999999999999999988665543
No 142
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=364.54 Aligned_cols=253 Identities=20% Similarity=0.281 Sum_probs=190.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++...+ ..++
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~l 125 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT----EISL 125 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSS----EEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCC----eEEE
Confidence 467999999999999999999876 58899999997643 3466788999999999999999999998766 4679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCcEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMVAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla~~~ 860 (1002)
||||+++|+|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+||+++. ++.+||+|||+++..
T Consensus 126 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp EECCCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred EEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 999999999999997654 4899999999999999999999 889999999999999975 899999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .. .+...
T Consensus 202 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----~~--------~i~~~ 266 (349)
T 2w4o_A 202 EHQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFM----FR--------RILNC 266 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHH----HH--------HHHTT
T ss_pred Cccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHH----HH--------HHHhC
Confidence 5432 123456899999999999989999999999999999999999999754322111 11 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....... .....+..+.+++.+||..||++|||+.|+++|-+
T Consensus 267 ~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 308 (349)
T 2w4o_A 267 EYYFISP----WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308 (349)
T ss_dssp CCCCCTT----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred CCccCCc----hhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 1110000 01224467889999999999999999999999754
No 143
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1e-39 Score=357.52 Aligned_cols=255 Identities=22% Similarity=0.334 Sum_probs=203.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CC-------cEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DG-------MEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
.++|+..+.||+|+||+||+|+.. ++ ..||+|++........+.+.+|++++++++||||+++++++...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD- 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT-
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC-
Confidence 357889999999999999999754 33 579999998766667788999999999999999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc--------
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV-------- 848 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~-------- 848 (1002)
..++||||+++|+|.+++...+..+++..+..++.||++||+||| +++|+||||||+||+++.++.
T Consensus 86 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 86 ---ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp ---CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred ---CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccce
Confidence 457999999999999999887666999999999999999999999 899999999999999988877
Q ss_pred EEEecccccccccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH
Q 037042 849 AHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN 927 (1002)
Q Consensus 849 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~ 927 (1002)
+||+|||++...... ....||..|+|||++.+ ..++.++|||||||++|||++|..|+........ ...
T Consensus 160 ~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~----~~~ 229 (289)
T 4fvq_A 160 IKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR----KLQ 229 (289)
T ss_dssp EEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH----HHH
T ss_pred eeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH----HHH
Confidence 999999999765432 12347888999998877 6789999999999999999996655443221111 000
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
... . ..... ...+..+.+++.+||+.+|++|||+.|++++|+++-....
T Consensus 230 ~~~--~-----~~~~~----------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 230 FYE--D-----RHQLP----------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp HHH--T-----TCCCC----------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred Hhh--c-----cCCCC----------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 000 0 00000 0113457899999999999999999999999999876443
No 144
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.8e-39 Score=363.69 Aligned_cols=256 Identities=22% Similarity=0.239 Sum_probs=195.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+.++++++||||+++++++...+ ..++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~~l 93 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPT----HLAI 93 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSS----EEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC----EEEE
Confidence 467999999999999999999865 789999999976432 3466889999999999999999999998776 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc--EEEeccccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV--AHLSDFGITKLLT 861 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~--~kl~DfGla~~~~ 861 (1002)
||||+++|+|.+++...+ .+++..++.++.|+++||+||| +++|+||||||+||+++.++. +||+|||+++...
T Consensus 94 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 94 IMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred EEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 999999999999997655 4899999999999999999999 899999999999999987765 9999999997543
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcc-cchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTN-GDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
... ......||+.|+|||++.+..++.+ +||||+||++|||++|+.||........ ....... +...
T Consensus 170 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~~--------~~~~ 237 (361)
T 3uc3_A 170 LHS---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQR--------ILSV 237 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHHH--------HHTT
T ss_pred ccC---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHHH--------HhcC
Confidence 322 1234569999999999888777655 8999999999999999999976543322 2222111 1111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
....+. ....+..+.+++.+||+.+|++|||+.|+++|-+-
T Consensus 238 ~~~~~~------~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 278 (361)
T 3uc3_A 238 KYSIPD------DIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278 (361)
T ss_dssp CCCCCT------TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHH
T ss_pred CCCCCC------cCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcch
Confidence 111111 01134568899999999999999999999999664
No 145
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=361.55 Aligned_cols=258 Identities=26% Similarity=0.418 Sum_probs=201.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcE----EEEEEeecc-cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGME----VAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
.++|+..+.||+|+||+||+|+.. +++. ||+|.+... .....+.+.+|+.++++++||||+++++++..+.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--- 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST--- 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS---
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC---
Confidence 357999999999999999999854 4554 577766543 2345678899999999999999999999998764
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
.++|+||+++|+|.+++...+..+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 91 --~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 91 --VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp --EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred --ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 35899999999999999887777999999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ....+.
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~---------- 233 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILE---------- 233 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHH----------
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHH----------
Confidence 7765444334445567889999999999999999999999999999999 999997643321 111110
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... .+..++..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 234 -~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 234 -KGERLP-------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -TTCCCC-------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred -cCCCCC-------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 000000 012234568899999999999999999999999998863
No 146
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.8e-39 Score=352.36 Aligned_cols=258 Identities=25% Similarity=0.432 Sum_probs=206.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeCC----CcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQD----GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|+..+.||+|+||+||+|++.+ +..||||++.... ....+.+.+|++++++++||||+++++++..+.
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 86 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP---- 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSS----
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC----
Confidence 4578899999999999999998542 3469999987653 345678899999999999999999999987544
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.++||||+++++|.+++...+..+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||++..
T Consensus 87 -~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 87 -TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp -CEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred -CEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 36999999999999999877667899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... ......+|+.|+|||+..+..++.++|||||||++|||++ |+.||....... ....+.
T Consensus 163 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~~----------- 228 (281)
T 3cc6_A 163 IEDEDYY-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVLE----------- 228 (281)
T ss_dssp C----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHHH-----------
T ss_pred ccccccc-ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHHh-----------
Confidence 6543321 2234567889999999988889999999999999999998 999997533221 111110
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
...... .+..++..+.+++.+||..+|++|||+.|++++|+++...
T Consensus 229 ~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 229 KGDRLP-------KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp HTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCCC-------CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 000000 0112346688999999999999999999999999988653
No 147
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.4e-39 Score=355.72 Aligned_cols=273 Identities=21% Similarity=0.362 Sum_probs=207.9
Q ss_pred cCCCCCceeeccCcceEEEEEe-----CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-----QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
..|+..+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++...+..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~-- 98 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN-- 98 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C--
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc--
Confidence 4588899999999999999984 368999999997543 33457889999999999999999999998765322
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred eEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccc
Confidence 346999999999999999776667999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCce-eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHH-HHHHHHHhhhhhhc
Q 037042 860 LTREDQF-VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLK-HWVNDWLLISIMKI 937 (1002)
Q Consensus 860 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~-~~~~~~~~~~~~~i 937 (1002)
....... .......||..|+|||++.+..++.++||||+||++|||++|+.|+........... .+........+...
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence 7654432 223455688899999999888999999999999999999999999755321100000 00000000000000
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
....... ..+..++..+.+++.+||+.+|++|||+.|+++.|+++-
T Consensus 256 ~~~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 256 LKEGKRL------PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHTTCCC------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhccCCC------CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0000000 011234567899999999999999999999999999863
No 148
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4.2e-39 Score=348.87 Aligned_cols=254 Identities=22% Similarity=0.310 Sum_probs=205.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+.. ++.||||++.... ....+.+.+|+.++++++||||+++++++...+.. ..+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~~~ 85 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP--HPT 85 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSS--SCE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCC--CeE
Confidence 357899999999999999999986 8899999997543 34456789999999999999999999999765211 457
Q ss_pred HhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCC--cEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTP--VIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
+||||+++|+|.+++..... .+++..+..++.||++||+||| +.+ |+||||||+||+++.++.++|+|||++..
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 86 LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred eeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence 99999999999999987654 5899999999999999999999 778 99999999999999999999999998765
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCc---ccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVST---NGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
... ....||+.|+|||++.+..++. ++|||||||++|||++|+.||....... ....... .
T Consensus 163 ~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~----~ 226 (271)
T 3kmu_A 163 FQS-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME-----IGMKVAL----E 226 (271)
T ss_dssp TSC-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH-----HHHHHHH----S
T ss_pred ecc-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH-----HHHHHHh----c
Confidence 332 2346889999999987665544 7999999999999999999997632211 1111000 0
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
..... .+..++..+.+++.+||+.+|++|||++|+++.|+++++
T Consensus 227 ~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 227 GLRPT----------IPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCCCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 00000 112245678999999999999999999999999999875
No 149
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=9.2e-39 Score=347.54 Aligned_cols=253 Identities=23% Similarity=0.272 Sum_probs=206.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||+||+|+.. ++..||+|++........+.+.+|++++++++||||+++++++.... ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~l 83 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT----DIYL 83 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----EEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC----eEEE
Confidence 456999999999999999999865 57899999998765556788999999999999999999999998776 4579
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee---CCCCcEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla~~~ 860 (1002)
||||+++++|.+++...+ .+++..+..++.|++.|++||| +++|+||||||+||++ +.++.+||+|||++...
T Consensus 84 v~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 84 VMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp EEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 999999999999987654 4899999999999999999999 8999999999999999 78899999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... .....||+.|+|||++.+ .++.++||||+||++|||++|+.||....... ... .+...
T Consensus 160 ~~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----~~~--------~~~~~ 222 (277)
T 3f3z_A 160 KPGKM---MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-----VML--------KIREG 222 (277)
T ss_dssp CTTSC---BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HHH--------HHHHC
T ss_pred cCccc---hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHH-----HHH--------HHHhC
Confidence 64432 234568999999998765 48999999999999999999999997642211 111 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....... ....++..+.+++.+|++.+|++|||+.|+++|-+
T Consensus 223 ~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~ 264 (277)
T 3f3z_A 223 TFTFPEK----DWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEW 264 (277)
T ss_dssp CCCCCHH----HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred CCCCCch----hhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHH
Confidence 1111110 01124567899999999999999999999998754
No 150
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.5e-39 Score=365.09 Aligned_cols=279 Identities=23% Similarity=0.237 Sum_probs=210.5
Q ss_pred cccccCHHHHHHhhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-----CCCcc
Q 037042 692 TWRRFSYLELCQATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-----HRNII 765 (1002)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv 765 (1002)
+...+++.+.....++|++.++||+|+||+||+|+. .+++.||||++... ......+..|+++++.++ ||||+
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 344555556556678999999999999999999986 46899999998743 334566788999999996 99999
Q ss_pred eeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC
Q 037042 766 KIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG 844 (1002)
Q Consensus 766 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~ 844 (1002)
++++++...+ ..++||||+ +++|.+++..... .+++..+..++.||+.||+||| +++|+||||||+|||++
T Consensus 100 ~~~~~~~~~~----~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~ 171 (360)
T 3llt_A 100 KYHGKFMYYD----HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLD 171 (360)
T ss_dssp CEEEEEEETT----EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEES
T ss_pred cccceeeECC----eeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEc
Confidence 9999998776 567999999 8899999987553 5899999999999999999999 89999999999999997
Q ss_pred C-------------------------CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHH
Q 037042 845 D-------------------------NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFG 899 (1002)
Q Consensus 845 ~-------------------------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG 899 (1002)
. ++.+||+|||+++...... ....||+.|+|||++.+..++.++||||+|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 246 (360)
T 3llt_A 172 DPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFG 246 (360)
T ss_dssp CTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHH
T ss_pred cccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHH
Confidence 5 8899999999998654322 345789999999999999999999999999
Q ss_pred HHHHHHHhCCCCCcccccccccHHHHH-----------HHHHhhhhhhcccCccC---Chhhh---H---------HHhH
Q 037042 900 VMLMETFTGKKPTNEIFNEGMTLKHWV-----------NDWLLISIMKIVDGSLL---SREDI---Q---------FVAK 953 (1002)
Q Consensus 900 v~l~elltg~~P~~~~~~~~~~~~~~~-----------~~~~~~~~~~i~~~~~~---~~~~~---~---------~~~~ 953 (1002)
|++|||++|+.||....... .+.... ............+.... .+... . ...+
T Consensus 247 ~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 325 (360)
T 3llt_A 247 CVLAELYTGSLLFRTHEHME-HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYK 325 (360)
T ss_dssp HHHHHHHHSSCSCCCSSHHH-HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHH
T ss_pred HHHHHHHHCCCCCCCCcHHH-HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccc
Confidence 99999999999997632211 011100 00000000000000000 00000 0 0000
Q ss_pred HHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 954 EQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 954 ~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
......+.+++.+||+.||++|||++|+++|-
T Consensus 326 ~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp 357 (360)
T 3llt_A 326 IIKHELFCDFLYSILQIDPTLRPSPAELLKHK 357 (360)
T ss_dssp HCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred cchHHHHHHHHHHHhcCChhhCCCHHHHhcCc
Confidence 11125688999999999999999999999763
No 151
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1e-38 Score=353.87 Aligned_cols=266 Identities=25% Similarity=0.426 Sum_probs=198.7
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
..++|...+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|++++++++||||+++++++...+..
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 4567889999999999999999753 35589999987542 33457789999999999999999999998765422
Q ss_pred h-HHHHHhhccCCCCChhHhhhc-----cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEE
Q 037042 778 A-LFKALALEYMPHGSLEKYLYS-----SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHL 851 (1002)
Q Consensus 778 ~-~~~~lv~e~~~~g~L~~~l~~-----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl 851 (1002)
. ...++||||+++|+|.+++.. ....+++..++.++.||++||+||| +++|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEE
Confidence 1 123789999999999999843 2246899999999999999999999 899999999999999999999999
Q ss_pred ecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHH
Q 037042 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 852 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
+|||+++...............+++.|+|||+..+..++.++|||||||++|||++ |+.||........ ..
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~------ 260 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM--YD------ 260 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HH------
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--HH------
Confidence 99999987755443333344567889999999988899999999999999999999 8889876432211 11
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
.+....... .+..++..+.+++.+||..+|++|||+.+++++|+++.+..
T Consensus 261 -----~~~~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 261 -----YLLHGHRLK-------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp -----HHHTTCCCC-------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -----HHHcCCCCC-------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 011110000 11234567899999999999999999999999999987543
No 152
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=6.4e-39 Score=349.16 Aligned_cols=260 Identities=22% Similarity=0.393 Sum_probs=210.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|+..++..||||++.... ...+.+.+|++++++++||||+++++++..+. .++|
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~v 85 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----IYII 85 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----CEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcCCC-----cEEE
Confidence 35788899999999999999998888899999997653 23577899999999999999999999986543 4699
Q ss_pred hccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++++|.+++..... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 999999999999976532 5899999999999999999999 899999999999999999999999999999877644
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. .......++..|+|||+..+..++.++|||||||++|||++ |+.||...... +.... +..-...
T Consensus 163 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~-----~~~~~~~-- 229 (279)
T 1qpc_A 163 EY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQN-----LERGYRM-- 229 (279)
T ss_dssp CE-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHH-----HHTTCCC--
T ss_pred cc-ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-----HHHHH-----HhcccCC--
Confidence 32 22244567888999999988889999999999999999999 99998753221 11111 0000000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
. .+..++..+.+++.+||..+|++|||+.++++.|+++......
T Consensus 230 ~--------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 273 (279)
T 1qpc_A 230 V--------RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 273 (279)
T ss_dssp C--------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred C--------CcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccC
Confidence 0 0122446789999999999999999999999999998765443
No 153
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=362.66 Aligned_cols=255 Identities=21% Similarity=0.325 Sum_probs=197.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccC--CCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRH--RNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~ 780 (1002)
..+|++.+.||+|+||+||+|...+++.||||++.... ....+.+.+|++++++++| |||+++++++.... .
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~----~ 83 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ----Y 83 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----E
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC----E
Confidence 45699999999999999999998889999999987543 3345778999999999986 99999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||| +.+|+|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+|||++ ++.+||+|||+++..
T Consensus 84 ~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 84 IYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EEEEEC-CCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EEEEEe-CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 679999 56889999998754 5899999999999999999999 89999999999999996 678999999999877
Q ss_pred cCCCceeeeccCCCCcccccccccCC-----------CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSE-----------GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW 929 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 929 (1002)
.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~----- 229 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---K----- 229 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---H-----
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH---H-----
Confidence 65443333345679999999998754 6789999999999999999999999975322111 1
Q ss_pred HhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 930 LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 930 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
...+.++...... +...+..+.+++.+||+.||++|||+.|+++|-+-
T Consensus 230 ----~~~~~~~~~~~~~------~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~ 277 (343)
T 3dbq_A 230 ----LHAIIDPNHEIEF------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277 (343)
T ss_dssp ----HHHHHCTTSCCCC------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred ----HHHHhcCCcccCC------cccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccc
Confidence 1111111111000 11123568899999999999999999999998663
No 154
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=6.9e-39 Score=352.55 Aligned_cols=263 Identities=25% Similarity=0.419 Sum_probs=205.9
Q ss_pred cCCCCCceeeccCcceEEEEEeCC----CcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD----GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.+|+..+.||+|+||+||+|+..+ +..||+|++.... ....+.+.+|+.++++++||||+++++++...+. .
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~ 101 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---S 101 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS---C
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC---c
Confidence 458888999999999999998542 3368999987543 3445778999999999999999999998754432 3
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++......+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred eEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccc
Confidence 46999999999999999876667899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCc--eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhC-CCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 861 TREDQ--FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTG-KKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 861 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg-~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
..... ........+|+.|+|||.+.+..++.++||||+||++|||++| .+||...... . .... +
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-~-~~~~-----------~ 245 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-D-ITVY-----------L 245 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT-T-HHHH-----------H
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH-H-HHHH-----------H
Confidence 54332 1223455678899999999888999999999999999999994 5555442221 1 1110 0
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
....... .+..++..+.+++.+||+.+|++|||+.|+++.|+++......
T Consensus 246 ~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 246 LQGRRLL-------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp HTTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred hcCCCCC-------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 0010000 0112345689999999999999999999999999999875544
No 155
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.7e-40 Score=366.36 Aligned_cols=272 Identities=22% Similarity=0.323 Sum_probs=193.0
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHh--ccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKS--IRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
++|+..+.||+|+||+||+|+.. |+.||||++... ....+.+|.+++.. ++||||+++++++..........++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 57999999999999999999875 899999998754 33556778888887 7899999999998776532223579
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcC-----CCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG-----YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
||||+++|+|.+++... .+++..+..++.|++.|++|||.. ++++|+||||||+||+++.++.+||+|||+++
T Consensus 79 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred EEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 99999999999999764 377888899999999999999932 26789999999999999999999999999998
Q ss_pred cccCCCceee--eccCCCCcccccccccCCC------CcCcccchHHHHHHHHHHHhC----------CCCCcccccccc
Q 037042 859 LLTREDQFVT--QTQTPATIGYMALEYGSEG------RVSTNGDVYNFGVMLMETFTG----------KKPTNEIFNEGM 920 (1002)
Q Consensus 859 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~elltg----------~~P~~~~~~~~~ 920 (1002)
.......... .....||+.|+|||++.+. .++.++|||||||++|||++| ..||........
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CC
T ss_pred eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCc
Confidence 7655443221 2334799999999998766 455789999999999999999 666654332221
Q ss_pred cHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 921 TLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
........ +..... ............++..+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 237 ~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 237 SVEEMRKV--------VCEQKL-RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCC-CHHH--------HTTSCC-CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred cHHHHHHH--------HHHhhc-CCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 11111111 111111 1111111223356788999999999999999999999999999988654
No 156
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.3e-38 Score=364.05 Aligned_cols=278 Identities=21% Similarity=0.271 Sum_probs=196.8
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc--cchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 779 (1002)
..++|+..+.||+|+||+||+|.. .+|+.||||++... .......+.+|+.+++++. ||||+++++++...+..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~-- 84 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR-- 84 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS--
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC--
Confidence 457899999999999999999985 47999999998643 2334567788999999997 99999999998754422
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||++ |+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 3479999997 5999998764 4899999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCC-------------------ceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCccccccc
Q 037042 860 LTRED-------------------QFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG 919 (1002)
Q Consensus 860 ~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~ 919 (1002)
+.... .....+..+||+.|+|||++.+ ..|+.++||||+||++|||++|+.||.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~ 238 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 54311 1112244579999999998876 678999999999999999999999997642211
Q ss_pred ccHHHHHHHHHhhh---hhhcccC-----------------ccCChhhh-------HHHhHHHHHHHHHHHHhHccccCC
Q 037042 920 MTLKHWVNDWLLIS---IMKIVDG-----------------SLLSREDI-------QFVAKEQCMSFVFNMAMECTVESP 972 (1002)
Q Consensus 920 ~~~~~~~~~~~~~~---~~~i~~~-----------------~~~~~~~~-------~~~~~~~~~~~l~~li~~cl~~~P 972 (1002)
.+........... +..+..+ ........ ....+..++..+.+++.+||+.||
T Consensus 239 -~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP 317 (388)
T 3oz6_A 239 -QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317 (388)
T ss_dssp -HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred -HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence 1111111100000 0000000 00000000 000011345678999999999999
Q ss_pred CCCCCHHHHHHH--HHhhcc
Q 037042 973 EKRINAKEIVTR--LLKIND 990 (1002)
Q Consensus 973 ~~Rpt~~evl~~--L~~i~~ 990 (1002)
++|||++|+++| +..+.+
T Consensus 318 ~~R~t~~e~l~Hp~~~~~~~ 337 (388)
T 3oz6_A 318 NKRISANDALKHPFVSIFHN 337 (388)
T ss_dssp GGSCCHHHHTTSTTTTTTCC
T ss_pred ccCCCHHHHhCCHHHHHhcC
Confidence 999999999999 444543
No 157
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=4.8e-39 Score=357.72 Aligned_cols=251 Identities=21% Similarity=0.257 Sum_probs=183.0
Q ss_pred CceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHHHhhccC
Q 037042 711 NNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKALALEYM 788 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~lv~e~~ 788 (1002)
.+.||+|+||+||+|+.. +++.||||++.+. ....+.+|+.+++.+. ||||+++++++.... ..++||||+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~----~~~lv~e~~ 88 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQL----HTFLVMELL 88 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----EEEEEECCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC----EEEEEEEcc
Confidence 478999999999999865 6899999999754 3466788999999997 999999999998776 557999999
Q ss_pred CCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC---cEEEecccccccccCCCc
Q 037042 789 PHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM---VAHLSDFGITKLLTREDQ 865 (1002)
Q Consensus 789 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~---~~kl~DfGla~~~~~~~~ 865 (1002)
++|+|.+++...+ .+++..+..++.||++||+||| +++|+||||||+||+++.++ .+||+|||+++.......
T Consensus 89 ~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 164 (325)
T 3kn6_A 89 NGGELFERIKKKK-HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164 (325)
T ss_dssp CSCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred CCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence 9999999998764 5899999999999999999999 89999999999999997665 899999999986654322
Q ss_pred eeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccccc--ccHHHHHHHHHhhhhhhcccCccC
Q 037042 866 FVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG--MTLKHWVNDWLLISIMKIVDGSLL 943 (1002)
Q Consensus 866 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~ 943 (1002)
......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+.. ..+..+...
T Consensus 165 --~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~--------~~i~~~~~~ 234 (325)
T 3kn6_A 165 --PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM--------KKIKKGDFS 234 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHH--------HHHTTTCCC
T ss_pred --cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHH--------HHHHcCCCC
Confidence 2234568999999999999999999999999999999999999997643221 1111111 112222111
Q ss_pred ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 944 SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 944 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... .....++..+.+++.+||+.||++|||++|+++|-+
T Consensus 235 ~~~----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w 273 (325)
T 3kn6_A 235 FEG----EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEW 273 (325)
T ss_dssp CCS----HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGG
T ss_pred CCc----ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChh
Confidence 111 111234577899999999999999999999998865
No 158
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.3e-38 Score=346.08 Aligned_cols=256 Identities=20% Similarity=0.288 Sum_probs=208.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++..++ ..+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~ 81 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN----IQY 81 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT----EEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC----EEE
Confidence 356899999999999999999865 68999999987543 345678899999999999999999999998765 457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++++|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 82 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 157 (276)
T 2yex_A 82 LFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (276)
T ss_dssp EEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEEEecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence 9999999999999997654 4899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGS 941 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 941 (1002)
...........||..|+|||+..+..+ +.++|||||||++|||++|+.||............|.. ..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------------~~ 225 (276)
T 2yex_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE------------KK 225 (276)
T ss_dssp TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT------------TC
T ss_pred CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh------------cc
Confidence 433223345678999999999887765 78999999999999999999999765433222222211 00
Q ss_pred cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 942 LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... .....+..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 226 ~~~~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 264 (276)
T 2yex_A 226 TYLN------PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264 (276)
T ss_dssp TTST------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred cccC------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCcc
Confidence 0000 01123456889999999999999999999998754
No 159
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=5.1e-39 Score=367.53 Aligned_cols=260 Identities=19% Similarity=0.230 Sum_probs=195.7
Q ss_pred hcCCCCC-ceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHh-ccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSEN-NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKS-IRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|... +.||+|+||+||+|+.. +|+.||||++... ..+.+|++++.+ .+||||+++++++..........
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3456665 68999999999999865 6899999998643 456778888754 58999999999886521111245
Q ss_pred HHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCcEEEeccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMVAHLSDFGIT 857 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla 857 (1002)
++||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++. ++.+||+|||++
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 79999999999999998754 36899999999999999999999 899999999999999987 789999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccccccc--HHHHHHHHHhhhhh
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMT--LKHWVNDWLLISIM 935 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~--~~~~~~~~~~~~~~ 935 (1002)
+...... .....+||+.|+|||++.+..|+.++|||||||++|||++|+.||......... ....+
T Consensus 212 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i--------- 279 (400)
T 1nxk_A 212 KETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI--------- 279 (400)
T ss_dssp EECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH---------
T ss_pred cccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH---------
Confidence 8665332 224557899999999999999999999999999999999999999764332211 11110
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
..+....... ....++..+.+++.+||+.||++|||+.|+++|-+-...
T Consensus 280 --~~~~~~~~~~----~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 328 (400)
T 1nxk_A 280 --RMGQYEFPNP----EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328 (400)
T ss_dssp --HHTCCCCCTT----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred --HcCcccCCCc----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence 0000000000 012245678999999999999999999999999775443
No 160
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8e-39 Score=349.92 Aligned_cols=258 Identities=23% Similarity=0.387 Sum_probs=208.8
Q ss_pred cCCCCCc-eeeccCcceEEEEEeC---CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENN-LIGRGGFGSVYKARIQ---DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|.+.+ .||+|+||.||+|... ++..||||+++... ....+.+.+|++++++++||||+++++++....
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----- 83 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA----- 83 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSS-----
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCC-----
Confidence 4565655 8999999999999753 57889999998653 345678899999999999999999999995433
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 84 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred cEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 47999999999999999876667999999999999999999999 899999999999999999999999999999877
Q ss_pred cCCCceee-eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 861 TREDQFVT-QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 861 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
........ .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... .... +.
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~--------i~ 227 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-----VMAF--------IE 227 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH-----HHHH--------HH
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH-----HHHH--------Hh
Confidence 54433222 233457889999999988889999999999999999998 999997643211 1110 00
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
..... ..+..++..+.+++.+||+.+|++||++.|++++|+++...
T Consensus 228 ~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 228 QGKRM-------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp TTCCC-------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCcC-------CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 00000 01123456799999999999999999999999999988643
No 161
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.5e-39 Score=347.99 Aligned_cols=252 Identities=21% Similarity=0.370 Sum_probs=186.3
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+ .
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 85 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN----Y 85 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS----E
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC----e
Confidence 45799999999999999999986 479999999997542 223477889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++......+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 86 VYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp EEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 67999999999999999877667899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... ......||+.|+|||+..+..++.++||||+||++|||++|+.||........ ..++...
T Consensus 163 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-------------~~~~~~~ 227 (278)
T 3cok_A 163 KMPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-------------LNKVVLA 227 (278)
T ss_dssp C------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------------CCSS
T ss_pred cCCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-------------HHHHhhc
Confidence 53322 12335689999999999888899999999999999999999999976432211 1111111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... +...+..+.+++.+||+.+|++|||++|+++|-.
T Consensus 228 ~~~~--------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 265 (278)
T 3cok_A 228 DYEM--------PSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPF 265 (278)
T ss_dssp CCCC--------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTT
T ss_pred ccCC--------ccccCHHHHHHHHHHcccCHhhCCCHHHHhcCcc
Confidence 1110 1123456889999999999999999999998744
No 162
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.5e-38 Score=353.64 Aligned_cols=254 Identities=20% Similarity=0.283 Sum_probs=206.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccch------hHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGR------AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.++|++.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 88 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT-- 88 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--
Confidence 356899999999999999999865 6899999998754321 3577899999999999999999999998766
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC----cEEEec
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM----VAHLSD 853 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~----~~kl~D 853 (1002)
..++||||+++++|.+++...+ .+++..+..++.|+++||+||| +.+|+||||||+||+++.++ .+||+|
T Consensus 89 --~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 89 --DVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp --EEEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred --EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEcc
Confidence 5679999999999999997654 4889999999999999999999 89999999999999999887 799999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... +...
T Consensus 163 fg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~------ 228 (321)
T 2a2a_A 163 FGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-----ETLA------ 228 (321)
T ss_dssp CTTCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHHH------
T ss_pred CccceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH-----HHHH------
Confidence 999987654332 23456899999999999889999999999999999999999999653221 1111
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+......... ......+..+.+++.+||..||++|||+.|+++|-+
T Consensus 229 --~i~~~~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~ 275 (321)
T 2a2a_A 229 --NITSVSYDFDE----EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275 (321)
T ss_dssp --HHHTTCCCCCH----HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTT
T ss_pred --HHHhcccccCh----hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 11111111110 011234567899999999999999999999998743
No 163
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=9.8e-39 Score=347.71 Aligned_cols=249 Identities=24% Similarity=0.327 Sum_probs=201.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+ .
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 83 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT----R 83 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----E
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC----E
Confidence 467999999999999999999865 57899999986532 223567889999999999999999999998776 4
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 84 VYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 579999999999999997654 4899999999999999999999 899999999999999999999999999998654
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||...... ..... +...
T Consensus 160 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~--------~~~~ 222 (279)
T 3fdn_A 160 PSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-----ETYKR--------ISRV 222 (279)
T ss_dssp ------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHH--------HHHT
T ss_pred Cccc----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH-----HHHHH--------HHhC
Confidence 4322 23457899999999999989999999999999999999999999753211 11111 0000
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... .+...+..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 223 ~~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~ 260 (279)
T 3fdn_A 223 EFT--------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260 (279)
T ss_dssp CCC--------CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHH
T ss_pred CCC--------CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCcc
Confidence 000 01123456889999999999999999999999966
No 164
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.9e-39 Score=359.17 Aligned_cols=260 Identities=20% Similarity=0.288 Sum_probs=201.0
Q ss_pred HhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc-----cchhHHHHHHHHHHHHhccCCCcceeeeEEecCch
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ-----CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 776 (1002)
...++|+..+.||+|+||+||+|+.. +++.||+|++.+. .....+.+.+|++++++++||||+++++++...+
T Consensus 23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~- 101 (345)
T 3hko_A 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ- 101 (345)
T ss_dssp HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC-
Confidence 45567999999999999999999864 6889999998753 2345678899999999999999999999998776
Q ss_pred hhHHHHHhhccCCCCChhHhhhcc---------------------------------------CCcCCHHHHHHHHHHHH
Q 037042 777 KALFKALALEYMPHGSLEKYLYSS---------------------------------------NYILDIFQRLNIMIDVA 817 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~l~~~~~~~i~~~ia 817 (1002)
..++||||+++|+|.+++... ...+++..++.++.||+
T Consensus 102 ---~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 178 (345)
T 3hko_A 102 ---YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178 (345)
T ss_dssp ---EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred ---eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 567999999999999998521 11235677888999999
Q ss_pred HHHHHHHcCCCCCcEEccCCCCCeeeCCCC--cEEEecccccccccCCCc--eeeeccCCCCcccccccccCC--CCcCc
Q 037042 818 SALEYLYFGYSTPVIHCDLKPSNVLLGDNM--VAHLSDFGITKLLTREDQ--FVTQTQTPATIGYMALEYGSE--GRVST 891 (1002)
Q Consensus 818 ~~l~~LH~~~~~~iiHrDlkp~NILl~~~~--~~kl~DfGla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~ 891 (1002)
+||+||| +.+|+||||||+||+++.++ .+||+|||+++.+..... ........||+.|+|||++.+ ..++.
T Consensus 179 ~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 255 (345)
T 3hko_A 179 SALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255 (345)
T ss_dssp HHHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred HHHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence 9999999 88999999999999998766 899999999987644221 112345679999999998865 67899
Q ss_pred ccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccC
Q 037042 892 NGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVES 971 (1002)
Q Consensus 892 ~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 971 (1002)
++|||||||++|||++|+.||....... .. ..+.......... .....+..+.+++.+||+.+
T Consensus 256 ~~DiwslG~il~el~~g~~pf~~~~~~~-----~~--------~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~ 318 (345)
T 3hko_A 256 KCDAWSAGVLLHLLLMGAVPFPGVNDAD-----TI--------SQVLNKKLCFENP----NYNVLSPLARDLLSNLLNRN 318 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HH--------HHHHHCCCCTTSG----GGGGSCHHHHHHHHHHSCSC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCChHH-----HH--------HHHHhcccccCCc----ccccCCHHHHHHHHHHcCCC
Confidence 9999999999999999999997643221 11 1111111111110 11123567889999999999
Q ss_pred CCCCCCHHHHHHHHH
Q 037042 972 PEKRINAKEIVTRLL 986 (1002)
Q Consensus 972 P~~Rpt~~evl~~L~ 986 (1002)
|++||++.|+++|-+
T Consensus 319 p~~Rps~~~~l~hp~ 333 (345)
T 3hko_A 319 VDERFDAMRALQHPW 333 (345)
T ss_dssp TTTSCCHHHHHHSHH
T ss_pred hhHCCCHHHHhcChh
Confidence 999999999999854
No 165
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=352.10 Aligned_cols=265 Identities=21% Similarity=0.265 Sum_probs=199.1
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc--hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG--RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++|+..+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++...+ ..+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~ 78 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR----RLH 78 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----EEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCC----eEE
Confidence 57899999999999999999865 589999999865432 33567889999999999999999999998766 457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++++|.+++...+ .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 79 lv~e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 79 LVFEYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp EEEECCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEEEeCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 9999999999999886554 4899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH-----------HH
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND-----------WL 930 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~-----------~~ 930 (1002)
... ......||..|+|||++.+ ..++.++||||+||++|||++|+.||........ ....... +.
T Consensus 155 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 231 (311)
T 4agu_A 155 PSD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQVFS 231 (311)
T ss_dssp -------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHH
T ss_pred ccc--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhcccccccccccc
Confidence 332 2234578999999998765 5689999999999999999999999976432211 1110000 00
Q ss_pred hhhh-h--hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 931 LISI-M--KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 931 ~~~~-~--~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.... . .+.++.... ... .....++..+.+++.+||+.||++|||++|+++|
T Consensus 232 ~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 232 TNQYFSGVKIPDPEDME--PLE-LKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TCGGGTTCCCCCCSSCC--CHH-HHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccccCcCCCccccc--hhh-hhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000 0 000000000 000 0112345678999999999999999999999987
No 166
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-38 Score=356.64 Aligned_cols=258 Identities=27% Similarity=0.463 Sum_probs=201.5
Q ss_pred cCCCCCceeeccCcceEEEEEeCC-----CcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD-----GMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.+|+..+.||+|+||+||+|+... +..||||+++... ......+.+|++++++++||||+++++++...+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 119 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK---- 119 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC----
Confidence 467778999999999999997542 3469999997653 334567889999999999999999999997765
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++......+++..++.++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 120 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 120 PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp SEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred CcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 567999999999999999877667999999999999999999999 88999999999999999999999999999987
Q ss_pred ccCCCce-eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 860 LTREDQF-VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 860 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
....... .......+|..|+|||++.+..++.++|||||||++|||++ |+.||...... +... .+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~~--------~~ 263 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-----EVMK--------AI 263 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHH--------HH
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-----HHHH--------HH
Confidence 6543221 12233456788999999988899999999999999999999 99999653221 1111 11
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
.+..... .+..++..+.+++.+||+.+|++||++.|++++|+++..
T Consensus 264 ~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 264 NDGFRLP-------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp HTTCCCC-------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HCCCcCC-------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1110000 011245678999999999999999999999999998754
No 167
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=7.2e-39 Score=365.27 Aligned_cols=253 Identities=21% Similarity=0.321 Sum_probs=198.2
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcc--CCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIR--HRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.+|++.+.||+|+||+||+|...+++.||||++.... ....+.+.+|++++++++ ||||+++++++...+ ..
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~----~~ 131 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ----YI 131 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----EE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC----EE
Confidence 4599999999999999999998789999999987542 345678899999999996 599999999998776 46
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||| +.+++|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++ ++.+||+|||+++.+.
T Consensus 132 ~lv~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 132 YMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EEEEE-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred EEEEe-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 89999 56889999998765 5888899999999999999999 89999999999999995 5899999999998776
Q ss_pred CCCceeeeccCCCCcccccccccCC-----------CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSE-----------GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
............||+.|+|||++.+ ..|+.++|||||||++|||++|+.||........ .
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~----~----- 276 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS----K----- 276 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH----H-----
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH----H-----
Confidence 5433323345679999999998754 4689999999999999999999999975322111 1
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+..+.++...... +...+..+.+++.+||+.||++|||+.|+++|-+
T Consensus 277 ---~~~~~~~~~~~~~------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~ 323 (390)
T 2zmd_A 277 ---LHAIIDPNHEIEF------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 323 (390)
T ss_dssp ---HHHHHCTTSCCCC------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred ---HHHHhCccccCCC------CccchHHHHHHHHHHcccChhhCCCHHHHhhCcC
Confidence 1112221111000 0112356889999999999999999999998865
No 168
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.9e-39 Score=376.01 Aligned_cols=251 Identities=22% Similarity=0.272 Sum_probs=196.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||++.+. .......+.+|+++++.++||||+++++++...+ .
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~----~ 222 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD----R 222 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT----E
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC----E
Confidence 467999999999999999999854 6899999999754 2233466778999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCC-CCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS-TPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.++||||+++|+|.+++...+ .+++..+..++.||+.||+||| + ++|+||||||+|||++.++.+||+|||+|+.
T Consensus 223 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~ 298 (446)
T 4ejn_A 223 LCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE 298 (446)
T ss_dssp EEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred EEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence 679999999999999997765 4899999999999999999999 7 8999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... ......||+.|+|||++.+..|+.++|||||||++|||++|+.||...... ..... +..
T Consensus 299 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~~--------i~~ 363 (446)
T 4ejn_A 299 GIKDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFEL--------ILM 363 (446)
T ss_dssp TCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH--------HHH
T ss_pred ccCCCc--ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-----HHHHH--------HHh
Confidence 443222 234567999999999999999999999999999999999999999763221 11111 111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L~ 986 (1002)
..... +...+..+.+++.+||+.||++|| +++|+++|-.
T Consensus 364 ~~~~~--------p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~ 407 (446)
T 4ejn_A 364 EEIRF--------PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 407 (446)
T ss_dssp CCCCC--------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred CCCCC--------CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCcc
Confidence 11111 112346688999999999999999 9999998743
No 169
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2e-38 Score=346.26 Aligned_cols=254 Identities=19% Similarity=0.309 Sum_probs=205.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|++.+.||+|+||+||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~ 80 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES----FH 80 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----EE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC----EE
Confidence 468999999999999999999865 68999999987543 334577889999999999999999999998766 45
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc---EEEecccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV---AHLSDFGITK 858 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~---~kl~DfGla~ 858 (1002)
++||||+++|+|.+++...+ .+++..+..++.|++.|++||| +.+|+||||||+||+++.++. +||+|||++.
T Consensus 81 ~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 81 YLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 79999999999999887664 4899999999999999999999 899999999999999976655 9999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .........
T Consensus 157 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~~------ 222 (284)
T 3kk8_A 157 EVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-----RLYAQIKAG------ 222 (284)
T ss_dssp ECCSSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHHT------
T ss_pred EcccCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-----HHHHHHHhc------
Confidence 7654432 23467899999999999999999999999999999999999999663221 111111100
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....... ....++..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 223 --~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (284)
T 3kk8_A 223 --AYDYPSP----EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 264 (284)
T ss_dssp --CCCCCTT----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHH
T ss_pred --cccCCch----hhcccCHHHHHHHHHHcccChhhCCCHHHHhcCcc
Confidence 0000000 01123466889999999999999999999999854
No 170
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=7.9e-39 Score=359.03 Aligned_cols=251 Identities=24% Similarity=0.319 Sum_probs=202.9
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
+.|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~ 129 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH----TA 129 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----EE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC----eE
Confidence 3588889999999999999985 579999999987542 234467889999999999999999999998766 55
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||++ |++.+++...+..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 130 ~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 130 WLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred EEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 79999997 6898888766667999999999999999999999 8899999999999999999999999999998664
Q ss_pred CCCceeeeccCCCCcccccccccC---CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGS---EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
.. ....||+.|+|||++. .+.++.++|||||||++|||++|+.||...... ...... ..-.
T Consensus 206 ~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-----~~~~~~-----~~~~ 269 (348)
T 1u5q_A 206 PA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SALYHI-----AQNE 269 (348)
T ss_dssp SB------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHH-----HHSC
T ss_pred CC------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHH-----HhcC
Confidence 32 2357899999999873 567899999999999999999999998653221 111110 0000
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
.+... +...+..+.+++.+||+.+|++|||++|+++|.+-.+
T Consensus 270 ~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~ 311 (348)
T 1u5q_A 270 SPALQ---------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 311 (348)
T ss_dssp CCCCC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred CCCCC---------CCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence 01000 1123456889999999999999999999999876544
No 171
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.2e-38 Score=370.94 Aligned_cols=271 Identities=20% Similarity=0.155 Sum_probs=198.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecc--cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchh--hH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQ--CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK--AL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~ 779 (1002)
.++|+..+.||+|+||+||+|+.. +|+.||||++... .....+.+.+|+.+++.++||||+++++++...... ..
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 468999999999999999999854 6899999999754 334467788999999999999999999998755311 11
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++ ++.+.+.. .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 34799999976 56666643 3889999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh-------
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI------- 932 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~------- 932 (1002)
..... ......||+.|+|||++.+..|+.++||||+||++|||++|+.||....... .+...+......
T Consensus 214 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 214 AGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp ---CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHTT
T ss_pred cCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHH
Confidence 65432 2245678999999999999999999999999999999999999997632211 111111110000
Q ss_pred ---hhhhcccCcc--CChhhh----------HHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 933 ---SIMKIVDGSL--LSREDI----------QFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 933 ---~~~~i~~~~~--~~~~~~----------~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.......... ...... ...........+.+++.+||.+||++|||++|+++|-+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~ 358 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChh
Confidence 0000000000 000000 00011233677899999999999999999999999854
No 172
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=4.5e-39 Score=363.32 Aligned_cols=249 Identities=25% Similarity=0.295 Sum_probs=193.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHH-HHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEV-MKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|+..+.||+|+||.||+|+.. +++.||||++++.. ......+..|..+ ++.++||||+++++++...+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~---- 112 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD---- 112 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC----
Confidence 457999999999999999999865 58899999997653 2234456667776 56789999999999998776
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++.
T Consensus 113 ~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 113 KLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccc
Confidence 5689999999999999998755 4888999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... .....+||+.|+|||++.+..|+.++|||||||++|||++|+.||...... +... .+..
T Consensus 189 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-----~~~~--------~i~~ 253 (373)
T 2r5t_A 189 NIEHNS--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-----EMYD--------NILN 253 (373)
T ss_dssp GBCCCC--CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-----HHHH--------HHHH
T ss_pred cccCCC--ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-----HHHH--------HHHh
Confidence 433221 234567999999999999999999999999999999999999999763221 1111 1111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHH----HHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAK----EIVTR 984 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~----evl~~ 984 (1002)
...... ...+..+.+++.+||+.||++||++. |+.+|
T Consensus 254 ~~~~~~--------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h 294 (373)
T 2r5t_A 254 KPLQLK--------PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH 294 (373)
T ss_dssp SCCCCC--------SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTS
T ss_pred cccCCC--------CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCC
Confidence 111111 12345688999999999999999974 55554
No 173
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=358.80 Aligned_cols=244 Identities=23% Similarity=0.328 Sum_probs=202.6
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccc--------hhHHHHHHHHHHHHhccCCCcceeeeEEecCc
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCG--------RAFKSFDVECEVMKSIRHRNIIKIISCCSIGD 775 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 775 (1002)
.++|+..+.||+|+||+||+|+. .+++.||||++..... .....+.+|++++++++||||+++++++...+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 46799999999999999999985 4789999999975421 12345678999999999999999999998776
Q ss_pred hhhHHHHHhhccCCCC-ChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecc
Q 037042 776 FKALFKALALEYMPHG-SLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g-~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
..++||||+.+| +|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 103 ----~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 103 ----FFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp ----EEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCC
T ss_pred ----EEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeec
Confidence 557999999777 9999997665 4899999999999999999999 899999999999999999999999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
|+++........ ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 175 g~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------------- 236 (335)
T 3dls_A 175 GSAAYLERGKLF---YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------------- 236 (335)
T ss_dssp TTCEECCTTCCB---CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------------
T ss_pred ccceECCCCCce---eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------------
Confidence 999877654322 33568999999999888776 88999999999999999999999763211
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....... +..++..+.+++.+||+++|++|||+.|+++|-+
T Consensus 237 ----~~~~~~~--------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~ 277 (335)
T 3dls_A 237 ----VEAAIHP--------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPW 277 (335)
T ss_dssp ----TTTCCCC--------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTT
T ss_pred ----HhhccCC--------CcccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 1111111 1113456889999999999999999999999854
No 174
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.2e-39 Score=347.51 Aligned_cols=249 Identities=21% Similarity=0.313 Sum_probs=182.0
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||+||+|+. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++...+ .
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 87 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD----E 87 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----C
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC----e
Confidence 35799999999999999999985 478999999987542 234567889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+ ++++.+++...+ .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 88 ~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 162 (275)
T 2eue_A 88 IIMVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162 (275)
T ss_dssp EEEEEECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC---
T ss_pred EEEEehhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceec
Confidence 57999999 678888887654 4899999999999999999999 899999999999999999999999999999866
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
..... .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... ....... ..
T Consensus 163 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~--------~~ 226 (275)
T 2eue_A 163 TDGNF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-----PVLFKNI--------SN 226 (275)
T ss_dssp ---------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH--------HH
T ss_pred cCccc---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH--------Hh
Confidence 54332 234468999999999887765 7899999999999999999999976321 1111111 11
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..... +...+..+.+++.+||+.||++|||+.|+++|-+
T Consensus 227 ~~~~~--------~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~ 265 (275)
T 2eue_A 227 GVYTL--------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 265 (275)
T ss_dssp TCCCC--------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHH
T ss_pred CCCCC--------CccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCe
Confidence 11100 1123456889999999999999999999998855
No 175
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=7.3e-39 Score=354.43 Aligned_cols=264 Identities=22% Similarity=0.291 Sum_probs=199.9
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .......+.+|++++++++||||+++++++...+ .
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~ 106 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN----E 106 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT----E
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC----c
Confidence 45799999999999999999985 47999999998753 2345677889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 781 KALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
.++||||+++|+|.+++.. .+..+++..++.++.||++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~ 183 (310)
T 2wqm_A 107 LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLG 183 (310)
T ss_dssp EEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC---
T ss_pred EEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccce
Confidence 5799999999999999865 2346899999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
........ ......|+..|+|||++.+..++.++|||||||++|||++|+.||...... ...+.........
T Consensus 184 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~--- 255 (310)
T 2wqm_A 184 RFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKIEQCDY--- 255 (310)
T ss_dssp -----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC---HHHHHHHHHTTCS---
T ss_pred eeecCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh---HHHHHHHhhcccC---
Confidence 87654322 123456899999999999889999999999999999999999999753221 1121111111000
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
+... ...++..+.+++.+||..||++|||+.+++++|++++.....
T Consensus 256 --~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 256 --PPLP---------SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp --CCCC---------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred --CCCc---------ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 0000 112345788999999999999999999999999999876544
No 176
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=358.20 Aligned_cols=271 Identities=18% Similarity=0.196 Sum_probs=201.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeecccch-----------hHHHHHHHHHHHHhccCCCcceeee
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQCGR-----------AFKSFDVECEVMKSIRHRNIIKIIS 769 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~ 769 (1002)
.++|+..+.||+|+||+||+|+.. ++..||||++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357999999999999999999865 5788999998765322 1233567888999999999999999
Q ss_pred EEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC--
Q 037042 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-- 847 (1002)
Q Consensus 770 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-- 847 (1002)
++..........++||||+ +++|.+++...+ .+++..++.++.||+.||+||| +.+|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCC
Confidence 9877221122567999999 999999998765 5899999999999999999999 88999999999999998777
Q ss_pred cEEEecccccccccCCCcee-----eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccH
Q 037042 848 VAHLSDFGITKLLTREDQFV-----TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTL 922 (1002)
Q Consensus 848 ~~kl~DfGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~ 922 (1002)
.+||+|||+++.+....... ......||..|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 99999999998765432111 1134579999999999998899999999999999999999999996533222211
Q ss_pred HHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 923 KHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 923 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
....... ...+.... ........++..+.+++.+||..+|++||++.++++.|+++.-
T Consensus 271 ~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 271 QTAKTNL-LDELPQSV---------LKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHH-HHTTTHHH---------HHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHhh-cccccHHH---------HhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1111111 00000000 0000011345679999999999999999999999999998664
No 177
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-38 Score=349.69 Aligned_cols=264 Identities=23% Similarity=0.398 Sum_probs=207.8
Q ss_pred CCCCCceeeccCcceEEEEEeC-C---CcEEEEEEeecccc-hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQ-D---GMEVAVKVFNQQCG-RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.|...++||+|+||+||+|++. + +..||+|++..... ...+.+.+|++++++++||||+++++++...+. ..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG---LP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS---CC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC---Cc
Confidence 4566689999999999999853 2 33799999875433 345788899999999999999999999976542 23
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+.+|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 99 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp EEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 6899999999999999886667899999999999999999999 8899999999999999999999999999998665
Q ss_pred CCCce--eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 862 REDQF--VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 862 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
..... .......+|..|+|||...+..++.++|||||||++|||++|..|+........ ....+. .
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~-~~~~~~-----------~ 243 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD-LTHFLA-----------Q 243 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG-HHHHHH-----------T
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH-HHHHhh-----------c
Confidence 43211 122345678899999999999999999999999999999996666543222211 111111 0
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCC
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNG 995 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~ 995 (1002)
..... .+..++..+.+++.+||+.+|++|||+.|+++.|+++.......
T Consensus 244 ~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 244 GRRLP-------QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp TCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred CCCCC-------CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 00000 01123467899999999999999999999999999987665443
No 178
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1e-38 Score=375.13 Aligned_cols=255 Identities=20% Similarity=0.292 Sum_probs=207.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||++.+.. ......+.+|++++++++|||||++++++...+ .
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~----~ 258 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD----A 258 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----E
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC----E
Confidence 456889999999999999999865 79999999997542 234567889999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.++||||+++|+|.+++...+. .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++.
T Consensus 259 l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~ 335 (576)
T 2acx_A 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVH 335 (576)
T ss_dssp EEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEeccccee
Confidence 6899999999999999876543 5899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... ....+||+.|+|||++.+..|+.++||||+||++|||++|+.||........ ........ ..
T Consensus 336 ~~~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-~~~i~~~i-----~~--- 403 (576)
T 2acx_A 336 VPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERLV-----KE--- 403 (576)
T ss_dssp CCTTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-HHHHHHHH-----HH---
T ss_pred cccCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-HHHHHHHh-----hc---
Confidence 754432 2345899999999999998999999999999999999999999976432211 11111110 00
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L~ 986 (1002)
..... +...+..+.+++.+||+.||++|| +++|+++|-+
T Consensus 404 ~~~~~--------p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~Hpf 447 (576)
T 2acx_A 404 VPEEY--------SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPL 447 (576)
T ss_dssp CCCCC--------CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGG
T ss_pred ccccC--------CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChh
Confidence 00000 112346788999999999999999 7899998743
No 179
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=357.37 Aligned_cols=252 Identities=15% Similarity=0.138 Sum_probs=204.0
Q ss_pred hcCCCCCceeeccCcceEEEEE------eCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc---CCCcceeeeEEecCc
Q 037042 705 TDGFSENNLIGRGGFGSVYKAR------IQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR---HRNIIKIISCCSIGD 775 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~ 775 (1002)
.++|.+.+.||+|+||+||+|+ ..+++.||||++.... ...+..|++++++++ |+||+++++++...+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 4679999999999999999994 4468899999997543 456778888888886 999999999998776
Q ss_pred hhhHHHHHhhccCCCCChhHhhhc----cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC------
Q 037042 776 FKALFKALALEYMPHGSLEKYLYS----SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD------ 845 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~------ 845 (1002)
..++||||+++|+|.+++.. ....+++..++.|+.||++||+||| +++|+||||||+|||++.
T Consensus 141 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~ 213 (365)
T 3e7e_A 141 ----GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQD 213 (365)
T ss_dssp ----CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC-
T ss_pred ----CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCcc
Confidence 45799999999999999975 2346999999999999999999999 899999999999999998
Q ss_pred -----CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc
Q 037042 846 -----NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM 920 (1002)
Q Consensus 846 -----~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~ 920 (1002)
++.+||+|||+|+.+.............||+.|+|||++.+..|+.++|||||||++|||++|+.||........
T Consensus 214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~ 293 (365)
T 3e7e_A 214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC 293 (365)
T ss_dssp -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE
T ss_pred ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce
Confidence 899999999999876543333344667899999999999999999999999999999999999999966433211
Q ss_pred cHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCC-CCHHHHHHHHHhhccc
Q 037042 921 TLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKR-INAKEIVTRLLKINDL 991 (1002)
Q Consensus 921 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R-pt~~evl~~L~~i~~~ 991 (1002)
. ...... .. .....+.+++..|++.+|.+| |+++++.+.|+++-..
T Consensus 294 ~------------~~~~~~----~~---------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 294 K------------PEGLFR----RL---------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp E------------ECSCCT----TC---------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred e------------echhcc----cc---------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 0 001110 00 013457789999999999998 5688888888776544
No 180
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-38 Score=373.00 Aligned_cols=199 Identities=21% Similarity=0.299 Sum_probs=155.2
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCch-hhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF-KALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 780 (1002)
.++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++...+. ....
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 467999999999999999999854 78999999987542 3345778899999999999999999999865431 1124
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+ +|+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 57999998 569999987654 5899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCce-------------------------eeeccCCCCccccccccc-CCCCcCcccchHHHHHHHHHHHhC
Q 037042 861 TREDQF-------------------------VTQTQTPATIGYMALEYG-SEGRVSTNGDVYNFGVMLMETFTG 908 (1002)
Q Consensus 861 ~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGv~l~elltg 908 (1002)
...... ...+..+||+.|+|||++ ....|+.++|||||||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 532211 123455789999999975 566799999999999999999994
No 181
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=357.81 Aligned_cols=269 Identities=20% Similarity=0.259 Sum_probs=197.4
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccch-hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGR-AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
++|+..+.||+|+||+||+|+.. +++.||||++...... ....+.+|++++++++||||+++++++...+ ..++
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~l 77 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK----SLTL 77 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS----CEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC----EEEE
Confidence 57889999999999999999865 7899999998754321 1223457999999999999999999998776 5679
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||++ |+|.+++...+..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 78 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 78 VFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp EEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred Eecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 999997 5999999887777999999999999999999999 899999999999999999999999999999865433
Q ss_pred CceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ........ .............
T Consensus 154 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~-~~~~~~~~~~~~~ 229 (324)
T 3mtl_A 154 TK--TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRI-LGTPTEETWPGIL 229 (324)
T ss_dssp -----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHH-HCCCCTTTSTTGG
T ss_pred cc--ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH-hCCCChHhchhhh
Confidence 22 2234578999999998776 568999999999999999999999997643221 11111111 0000000000000
Q ss_pred CCh-----------hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 943 LSR-----------EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 943 ~~~-----------~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... ...........+..+.+++.+||+.||++|||++|+++|-+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 284 (324)
T 3mtl_A 230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284 (324)
T ss_dssp GCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred cchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChh
Confidence 000 00001111234567889999999999999999999999844
No 182
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=4.6e-39 Score=359.92 Aligned_cols=261 Identities=22% Similarity=0.374 Sum_probs=210.1
Q ss_pred hhcCCCCCceeeccCcceEEEEEeCC------CcEEEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCc
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQD------GMEVAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGD 775 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 775 (1002)
..++|+..+.||+|+||+||+|+... +..||+|++.... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 35679999999999999999998642 2479999997653 33457789999999999 8999999999998766
Q ss_pred hhhHHHHHhhccCCCCChhHhhhccC-------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCee
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSSN-------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVL 842 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~~-------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NIL 842 (1002)
..++||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||+
T Consensus 124 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 124 ----PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVL 196 (333)
T ss_dssp ----SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCE
T ss_pred ----ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEE
Confidence 5679999999999999987532 24789999999999999999999 889999999999999
Q ss_pred eCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCccccccccc
Q 037042 843 LGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMT 921 (1002)
Q Consensus 843 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~ 921 (1002)
++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||........
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~- 275 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK- 275 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-
Confidence 99999999999999987655443333345567889999999888889999999999999999999 9999876432211
Q ss_pred HHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 922 LKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... .. .... .+..++..+.+++.+||+.+|++|||+.|++++|+++..
T Consensus 276 ~~~~~~----~~----~~~~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 276 FYKLVK----DG----YQMA----------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HHHHHH----HT----CCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHh----cC----CCCC----------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 111110 00 0000 011234568899999999999999999999999998764
No 183
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=363.89 Aligned_cols=277 Identities=20% Similarity=0.270 Sum_probs=213.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..++||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+.. ..+
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~--~~~ 85 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTR--HKV 85 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTC--CEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCC--eeE
Confidence 357899999999999999999865 58999999997543 23456778999999999999999999998765422 346
Q ss_pred HhhccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee----CCCCcEEEecccc
Q 037042 783 LALEYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL----GDNMVAHLSDFGI 856 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl----~~~~~~kl~DfGl 856 (1002)
+||||+++|+|.+++..... .+++..++.++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 99999999999999987543 3899999999999999999999 8999999999999999 7888899999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCC--------CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSE--------GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND 928 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~ 928 (1002)
++....... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||........... .+..
T Consensus 163 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~-~~~~ 238 (396)
T 4eut_A 163 ARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKE-VMYK 238 (396)
T ss_dssp CEECCCGGG---SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHH-HHHH
T ss_pred ceEccCCCc---cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHH-HHHH
Confidence 987654432 234578999999998754 5678999999999999999999999976443332222 2221
Q ss_pred HHhhh----hhhc---ccCccCCh--hhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 929 WLLIS----IMKI---VDGSLLSR--EDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 929 ~~~~~----~~~i---~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
..... +..+ .+...... ..............+.+++.+||++||++||++.|++++++++-.
T Consensus 239 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp HHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred HhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 11111 0000 00000000 000111234567889999999999999999999999999988754
No 184
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=6.5e-39 Score=350.86 Aligned_cols=258 Identities=26% Similarity=0.404 Sum_probs=211.4
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
..++|+..+.||+|+||+||+|+.. ++..||+|++.... ...+.+.+|++++++++||||+++++++.... ..+
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~ 85 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP----PFY 85 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----SEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC----CEE
Confidence 3567889999999999999999866 58899999997543 34677899999999999999999999998766 457
Q ss_pred HhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
+||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 86 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 9999999999999997643 35899999999999999999999 8899999999999999999999999999998766
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... .......+|+.|+|||++.+..++.++||||+||++|||++ |..||....... ....+ ......
T Consensus 163 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~--~~~~~--------~~~~~~ 231 (288)
T 3kfa_A 163 GDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELL--------EKDYRM 231 (288)
T ss_dssp SSSS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHH--------HTTCCC
T ss_pred CCcc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH--------hccCCC
Confidence 4432 23344567888999999988899999999999999999999 999987643221 11110 000000
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
. .+..++..+.+++.+|+..+|++|||+.|+++.|+++..
T Consensus 232 ~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 232 E----------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C----------CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 0 112245678999999999999999999999999988653
No 185
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.6e-38 Score=367.72 Aligned_cols=205 Identities=22% Similarity=0.294 Sum_probs=168.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh-HH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA-LF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-~~ 780 (1002)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++....... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 568999999999999999999864 68899999997542 334577889999999999999999999987653211 13
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||++ |+|.+++.... .+++..++.++.||++||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 579999996 59999997654 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCce--------------------eeeccCCCCccccccccc-CCCCcCcccchHHHHHHHHHHHhCCCCCcc
Q 037042 861 TREDQF--------------------VTQTQTPATIGYMALEYG-SEGRVSTNGDVYNFGVMLMETFTGKKPTNE 914 (1002)
Q Consensus 861 ~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGv~l~elltg~~P~~~ 914 (1002)
...... ...+..+||+.|+|||++ ....|+.++||||+||++|||++|..||..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~ 254 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccc
Confidence 543221 123556799999999985 566799999999999999999987666543
No 186
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.7e-38 Score=352.65 Aligned_cols=269 Identities=20% Similarity=0.238 Sum_probs=200.4
Q ss_pred cCCCCC-ceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSEN-NLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
+.|++. +.||+|+||+||+|+. .+++.||||++..........+.+|+++++++ +||||+++++++...+ ..+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~----~~~ 87 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED----RFY 87 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT----EEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC----EEE
Confidence 567774 7899999999999985 47999999999876555677899999999995 7999999999998766 568
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc---EEEeccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV---AHLSDFGITKL 859 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~---~kl~DfGla~~ 859 (1002)
+||||+++|+|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+||+++.++. +||+|||++..
T Consensus 88 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 9999999999999998764 4899999999999999999999 889999999999999988766 99999999976
Q ss_pred ccCCCc-----eeeeccCCCCcccccccccCC-----CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHH--H
Q 037042 860 LTREDQ-----FVTQTQTPATIGYMALEYGSE-----GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWV--N 927 (1002)
Q Consensus 860 ~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~--~ 927 (1002)
...... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.............. .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 243 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch
Confidence 543221 111223468999999998764 5589999999999999999999999976533221100000 0
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.....-...+.......... ....++..+.+++.+||+.||++|||+.|+++|-+
T Consensus 244 ~~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 298 (316)
T 2ac3_A 244 ACQNMLFESIQEGKYEFPDK----DWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298 (316)
T ss_dssp HHHHHHHHHHHHCCCCCCHH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTT
T ss_pred hHHHHHHHHHhccCcccCch----hcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChh
Confidence 00000001111111111110 11224567899999999999999999999999855
No 187
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.2e-38 Score=350.12 Aligned_cols=264 Identities=19% Similarity=0.221 Sum_probs=204.6
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
..++|+..+.||+|+||+||+|+. .+++.||||++..... ...+.+|+++++.++|++++..+.++..... ..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~---~~~ 81 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD---YNV 81 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETT---EEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCC---ceE
Confidence 457899999999999999999985 5789999998765422 2457889999999998887777766543221 457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee---CCCCcEEEeccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKL 859 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla~~ 859 (1002)
+||||+ +++|.+++......+++..+..++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp EEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 999999 99999999876667999999999999999999999 8999999999999999 7889999999999987
Q ss_pred ccCCCce-----eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc--cHHHHHHHHHhh
Q 037042 860 LTREDQF-----VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM--TLKHWVNDWLLI 932 (1002)
Q Consensus 860 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~--~~~~~~~~~~~~ 932 (1002)
....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 237 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc
Confidence 6554321 122345789999999999999999999999999999999999999986433211 111111110000
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
.. ......++..+.+++.+||+.+|++|||+.++++.|+++...
T Consensus 238 ~~---------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 238 PI---------------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp CH---------------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred hh---------------hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 00 000122356799999999999999999999999999998754
No 188
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.9e-38 Score=365.45 Aligned_cols=255 Identities=23% Similarity=0.303 Sum_probs=195.0
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--------chhHHHHHHHHHHHHhccCCCcceeeeEEecC
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--------GRAFKSFDVECEVMKSIRHRNIIKIISCCSIG 774 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 774 (1002)
..++|...+.||+|+||+||+|... +++.||||++.+.. ......+.+|++++++++||||+++++++...
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 212 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 212 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 3578999999999999999999854 68999999987532 11223578899999999999999999998655
Q ss_pred chhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC---CcEEE
Q 037042 775 DFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN---MVAHL 851 (1002)
Q Consensus 775 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~---~~~kl 851 (1002)
. .++||||+++|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+|||++.+ +.+||
T Consensus 213 ~-----~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 213 D-----YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp E-----EEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred c-----eEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEE
Confidence 4 369999999999999987654 4899999999999999999999 8899999999999999654 45999
Q ss_pred ecccccccccCCCceeeeccCCCCcccccccccCC---CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH
Q 037042 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE---GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND 928 (1002)
Q Consensus 852 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~ 928 (1002)
+|||+++...... ......||+.|+|||++.+ ..|+.++|||||||++|||++|+.||........ ....+
T Consensus 284 ~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~~~~i-- 357 (419)
T 3i6u_A 284 TDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQI-- 357 (419)
T ss_dssp CCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-HHHHH--
T ss_pred eecccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-HHHHH--
Confidence 9999998765432 2234578999999998753 5688999999999999999999999976433222 11111
Q ss_pred HHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 929 WLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 929 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
......... .....++..+.+++.+||+.+|++|||++|+++|-+
T Consensus 358 ---------~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 402 (419)
T 3i6u_A 358 ---------TSGKYNFIP----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 402 (419)
T ss_dssp ---------HTTCCCCCH----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred ---------hcCCCCCCc----hhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcc
Confidence 111111000 011234567899999999999999999999999854
No 189
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.8e-38 Score=351.22 Aligned_cols=272 Identities=26% Similarity=0.424 Sum_probs=213.6
Q ss_pred hcCCCCCceeeccCcceEEEEEe-----CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-----QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
..+|+..+.||+|+||.||+|++ .+|+.||||++........+.+.+|++++++++||||+++++++...+..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-- 117 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR-- 117 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC--
Confidence 35688899999999999999984 36899999999877666778899999999999999999999988654321
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++|+|.+++...+..+++..++.++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred ceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 346999999999999999887667999999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceee-eccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc------cHHHHHHHHHhh
Q 037042 860 LTREDQFVT-QTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM------TLKHWVNDWLLI 932 (1002)
Q Consensus 860 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~------~~~~~~~~~~~~ 932 (1002)
......... .....++..|+|||++.+..++.++|||||||++|||++|..|+.....+.. ....+.. .
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~----~ 270 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV----F 270 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHH----H
T ss_pred ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhH----H
Confidence 765433222 2334577889999998888899999999999999999999999865321100 0000000 0
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
.+.+.+...... ..+..++..+.+++.+||+.+|++|||+.|+++.|+++++.
T Consensus 271 ~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 271 HLIELLKNNGRL------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHHHHHTTCCC------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCC------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 011111110000 01123457799999999999999999999999999998753
No 190
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=8.9e-39 Score=356.55 Aligned_cols=259 Identities=25% Similarity=0.419 Sum_probs=204.0
Q ss_pred hcCCCCCceeeccCcceEEEEEe------CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI------QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.++|+..+.||+|+||.||+|++ .+++.||||++.... ......+.+|+.++++++||||+++++++...+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC--
Confidence 46799999999999999999983 247789999997543 345567889999999999999999999998766
Q ss_pred hHHHHHhhccCCCCChhHhhhccC------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSN------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMV 848 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~ 848 (1002)
..++||||+++|+|.+++.... ..+++..++.++.||++||+||| +.+|+||||||+||+++. +..
T Consensus 107 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~ 181 (327)
T 2yfx_A 107 --PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRV 181 (327)
T ss_dssp --SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCC
T ss_pred --CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcce
Confidence 4579999999999999998754 34889999999999999999999 899999999999999984 456
Q ss_pred EEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHH
Q 037042 849 AHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVN 927 (1002)
Q Consensus 849 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~ 927 (1002)
+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 182 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~ 256 (327)
T 2yfx_A 182 AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-----EVLE 256 (327)
T ss_dssp EEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHH
T ss_pred EEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-----HHHH
Confidence 99999999987654433333344567889999999888899999999999999999998 99998753221 1111
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
. +....... .+..++..+.+++.+||+.+|.+||++.|++++|+.+..
T Consensus 257 ~--------~~~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 257 F--------VTSGGRMD-------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp H--------HHTTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H--------HhcCCCCC-------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 1 11110000 012244678899999999999999999999999998864
No 191
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=382.69 Aligned_cols=254 Identities=22% Similarity=0.377 Sum_probs=202.2
Q ss_pred eeeccCcceEEEEEeC---CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhccC
Q 037042 713 LIGRGGFGSVYKARIQ---DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALEYM 788 (1002)
Q Consensus 713 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 788 (1002)
.||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++|||||++++++..+. .++||||+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~-----~~lv~E~~ 417 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-----LMLVMEMA 417 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSS-----EEEEEECC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCC-----eEEEEEeC
Confidence 7999999999999753 46779999997653 345678999999999999999999999997643 57999999
Q ss_pred CCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCcee-
Q 037042 789 PHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFV- 867 (1002)
Q Consensus 789 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~- 867 (1002)
++|+|.+++...+..+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++.........
T Consensus 418 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 418 GGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp TTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 999999999877667999999999999999999999 8999999999999999999999999999998765433221
Q ss_pred eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChh
Q 037042 868 TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSRE 946 (1002)
Q Consensus 868 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 946 (1002)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ... .+..+...
T Consensus 495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~-----------~i~~~~~~--- 558 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMA-----------FIEQGKRM--- 558 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HHH-----------HHHTTCCC---
T ss_pred eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHH-----------HHHcCCCC---
Confidence 1223346788999999988899999999999999999998 999997643221 111 11111100
Q ss_pred hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCC
Q 037042 947 DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFN 994 (1002)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~ 994 (1002)
..+..++..+.++|.+||+.+|++||++.++++.|+.+-.....
T Consensus 559 ----~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 559 ----ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp ----CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred ----CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 01223567899999999999999999999999999987644333
No 192
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=352.48 Aligned_cols=274 Identities=23% Similarity=0.283 Sum_probs=203.4
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc-----chhHHHHHHHHHHHHhcc---CCCcceeeeEEecC
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC-----GRAFKSFDVECEVMKSIR---HRNIIKIISCCSIG 774 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~ 774 (1002)
..++|++.+.||+|+||+||+|+. .+++.||||++.... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999985 478999999987432 122356777888887775 99999999998765
Q ss_pred chh-hHHHHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEe
Q 037042 775 DFK-ALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLS 852 (1002)
Q Consensus 775 ~~~-~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 852 (1002)
... ....++||||++ |+|.+++..... .+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 421 123479999997 599999987654 4899999999999999999999 8999999999999999999999999
Q ss_pred cccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 853 DFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 853 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
|||+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ............
T Consensus 163 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~ 238 (308)
T 3g33_A 163 DFGLARIYSYQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLP 238 (308)
T ss_dssp SCSCTTTSTTCCC---SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred eCccccccCCCcc---cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCC
Confidence 9999987654322 244578999999999988899999999999999999999999997643221 111111111000
Q ss_pred hhhhcc------cCccC--ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 933 SIMKIV------DGSLL--SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 933 ~~~~i~------~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
...... ..... ...... ....+.+..+.+++.+||++||++|||+.|+++|-+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~ 299 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQ-SVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHH-HHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTT
T ss_pred ChhhccchhhccccccCCCCCCcHH-HhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCcc
Confidence 000000 00000 000000 111234567899999999999999999999998854
No 193
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.4e-38 Score=347.83 Aligned_cols=265 Identities=19% Similarity=0.225 Sum_probs=209.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|+..+.||+|+||+||+|+. .+|+.||||++..... .+.+.+|++++++++|++++..+.++...+. ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~---~~~l 82 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD---YNVM 82 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETT---EEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCC---ceEE
Confidence 46899999999999999999985 5799999999875432 2468899999999999887777666543321 4579
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC---CCCcEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG---DNMVAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGla~~~ 860 (1002)
||||+ +++|.+++...+..+++..+..++.||+.||+||| +++|+||||||+||+++ .++.+||+|||+++..
T Consensus 83 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 99999 89999999866667999999999999999999999 89999999999999994 8899999999999876
Q ss_pred cCCCcee-----eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccccccc--ccHHHHHHHHHhhh
Q 037042 861 TREDQFV-----TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG--MTLKHWVNDWLLIS 933 (1002)
Q Consensus 861 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~--~~~~~~~~~~~~~~ 933 (1002)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..............
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc
Confidence 6543211 1234578999999999999999999999999999999999999998643221 11111111100000
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
. ......++..+.+++.+||+.+|++|||+.++++.|+++.....
T Consensus 239 ~---------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 239 I---------------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp H---------------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred h---------------HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 0 00112345679999999999999999999999999999875543
No 194
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.2e-39 Score=360.12 Aligned_cols=256 Identities=21% Similarity=0.288 Sum_probs=202.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+.. +|+.||||++.+.... ..+|++++.++ +||||+++++++..++ ..+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~----~~~ 92 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGK----YVY 92 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSS----EEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCC----EEE
Confidence 457999999999999999999865 6899999999765432 35688888888 7999999999998776 568
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC----CcEEEecccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN----MVAHLSDFGITK 858 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~----~~~kl~DfGla~ 858 (1002)
+||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||++.++ +.+||+|||+++
T Consensus 93 lv~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 93 VVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp EEECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 9999999999999997654 4899999999999999999999 8999999999999998533 359999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... ......||+.|+|||++.+..|+.++||||+||++|||++|+.||..... ....+........
T Consensus 169 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~~~~i~~~------ 238 (342)
T 2qr7_A 169 QLRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILARIGSG------ 238 (342)
T ss_dssp ECBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT--SCHHHHHHHHHHC------
T ss_pred cCcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc--CCHHHHHHHHccC------
Confidence 7654332 22345789999999998888899999999999999999999999975322 1222222211111
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhh
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKI 988 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i 988 (1002)
....... .+...+..+.+++.+||..||++|||+.|+++|-+-.
T Consensus 239 --~~~~~~~----~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~ 282 (342)
T 2qr7_A 239 --KFSLSGG----YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIV 282 (342)
T ss_dssp --CCCCCST----TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred --CcccCcc----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeec
Confidence 1110000 0122456788999999999999999999999986643
No 195
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=7.5e-39 Score=379.98 Aligned_cols=257 Identities=24% Similarity=0.431 Sum_probs=209.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|++.++..||||+++... ...+.+.+|+++|++++||||+++++++... ..++|
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~lv 339 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-----PIYIV 339 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SCEEE
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEeec-----cceEe
Confidence 45688889999999999999999888889999998653 2356789999999999999999999998753 35799
Q ss_pred hccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++|+|.+++.... ..+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++.....
T Consensus 340 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 416 (535)
T ss_dssp ECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred eehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence 99999999999997542 35899999999999999999999 899999999999999999999999999999876532
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
.. .......+|..|+|||++.+..++.++|||||||++|||++ |+.||...... +.... +..+..
T Consensus 417 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~~--------i~~~~~ 482 (535)
T 2h8h_A 417 EY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQ--------VERGYR 482 (535)
T ss_dssp HH-HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHHH--------HHTTCC
T ss_pred ce-ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH--------HHcCCC
Confidence 21 11234457889999999988899999999999999999999 99999763221 11111 111100
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
. ..+..++..+.++|.+||+.+|++|||+.++++.|+.+-..
T Consensus 483 ~-------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 483 M-------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp C-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred C-------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 0 01123556789999999999999999999999999987643
No 196
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=5.6e-38 Score=342.65 Aligned_cols=249 Identities=24% Similarity=0.309 Sum_probs=205.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+ .
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 88 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK----R 88 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----E
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC----E
Confidence 357999999999999999999865 68899999986532 223567889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++...+ .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 164 (284)
T 2vgo_A 89 IYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHA 164 (284)
T ss_dssp EEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence 579999999999999998765 4899999999999999999999 899999999999999999999999999999765
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... .....|+..|+|||++.+..++.++||||||+++|||++|+.||...... .... .+...
T Consensus 165 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~--------~~~~~ 227 (284)
T 2vgo_A 165 PSLR----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-----ETHR--------RIVNV 227 (284)
T ss_dssp SSSC----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH--------HHHTT
T ss_pred cccc----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-----HHHH--------HHhcc
Confidence 4322 13457899999999999989999999999999999999999999763221 1111 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... +...+..+.+++.+|++.+|++|||+.|+++|-+
T Consensus 228 ~~~~--------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~ 265 (284)
T 2vgo_A 228 DLKF--------PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 265 (284)
T ss_dssp CCCC--------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHH
T ss_pred ccCC--------CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHH
Confidence 1111 1123456889999999999999999999999755
No 197
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.4e-38 Score=346.19 Aligned_cols=254 Identities=28% Similarity=0.425 Sum_probs=200.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.++|+..+.||+|+||+||+|+.. |+.||||+++... ..+.+.+|++++++++||||+++++++..... ..++|
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~lv 93 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIV 93 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC-----CCEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC---ceEEE
Confidence 357899999999999999999875 8899999987543 45778999999999999999999998755431 35799
Q ss_pred hccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 785 LEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
|||+++|+|.+++...+. .+++..+..++.|+++|++||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 170 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170 (278)
T ss_dssp ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred EecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence 999999999999976543 4788999999999999999999 899999999999999999999999999999765433
Q ss_pred CceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 864 DQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
. ....++..|+|||++.+..++.++||||||+++|||++ |+.||....... .. . .+.....
T Consensus 171 ~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~---~--------~~~~~~~ 232 (278)
T 1byg_A 171 Q-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VV---P--------RVEKGYK 232 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HH---H--------HHTTTCC
T ss_pred c-----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HH---H--------HHhcCCC
Confidence 2 22356888999999988889999999999999999998 999997642221 11 1 1111100
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
.. .+..++..+.+++.+||+.+|++|||+.|+++.|++++...
T Consensus 233 ~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 233 MD-------APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CC-------CcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 00 11234567899999999999999999999999999998654
No 198
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.3e-38 Score=350.01 Aligned_cols=262 Identities=21% Similarity=0.243 Sum_probs=199.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++...+ .
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~----~ 108 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG----Q 108 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT----E
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC----e
Confidence 468999999999999999999865 68999999987542 223577889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++...+ .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 109 LYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 579999999999999998654 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ..... ...
T Consensus 185 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~--------~~~ 249 (309)
T 2h34_A 185 TDEKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS------VMGAH--------INQ 249 (309)
T ss_dssp -------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH------HHHHH--------HHS
T ss_pred ccccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH------HHHHH--------hcc
Confidence 54322 1223456899999999999989999999999999999999999999763221 11110 001
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-CHHHHHHHHHhhcccCC
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-NAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-t~~evl~~L~~i~~~~~ 993 (1002)
...... ..+..++..+.+++.+||+.+|++|| +++++++.|+++-....
T Consensus 250 ~~~~~~----~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 250 AIPRPS----TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp CCCCGG----GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred CCCCcc----ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 111000 01123456788999999999999999 99999999998765443
No 199
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4.4e-38 Score=355.82 Aligned_cols=259 Identities=24% Similarity=0.342 Sum_probs=206.6
Q ss_pred HHHHHhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc--------hhHHHHHHHHHHHHhc-cCCCcceee
Q 037042 699 LELCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG--------RAFKSFDVECEVMKSI-RHRNIIKII 768 (1002)
Q Consensus 699 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~~~ 768 (1002)
.......++|++.+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|+++++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334445567999999999999999999875 799999999875431 1245678899999999 799999999
Q ss_pred eEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc
Q 037042 769 SCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV 848 (1002)
Q Consensus 769 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~ 848 (1002)
+++.... ..++||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.
T Consensus 167 ~~~~~~~----~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 167 DSYESSS----FMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp EEEEBSS----EEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCC
T ss_pred EEEeeCC----EEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCC
Confidence 9998766 5679999999999999997654 4899999999999999999999 889999999999999999999
Q ss_pred EEEecccccccccCCCceeeeccCCCCcccccccccC------CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccH
Q 037042 849 AHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGS------EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTL 922 (1002)
Q Consensus 849 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~ 922 (1002)
+||+|||++..+..... .....||+.|+|||++. ...++.++|||||||++|||++|+.||......
T Consensus 239 ikl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~---- 311 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI---- 311 (365)
T ss_dssp EEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----
T ss_pred EEEEecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH----
Confidence 99999999987765432 24467999999999875 335899999999999999999999999653211
Q ss_pred HHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 923 KHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 923 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.... .+......... .....++..+.+++.+||+.+|++|||+.|+++|-
T Consensus 312 -~~~~--------~i~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 361 (365)
T 2y7j_A 312 -LMLR--------MIMEGQYQFSS----PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHP 361 (365)
T ss_dssp -HHHH--------HHHHTCCCCCH----HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred -HHHH--------HHHhCCCCCCC----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence 1111 11111111110 01122456789999999999999999999999874
No 200
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.3e-38 Score=345.59 Aligned_cols=259 Identities=21% Similarity=0.292 Sum_probs=205.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc------hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG------RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
++|+..+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++....
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 81 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--- 81 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC---
Confidence 46889999999999999999865 689999999875421 13678899999999999999999999998766
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC----cEEEecc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM----VAHLSDF 854 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~----~~kl~Df 854 (1002)
..++||||+++++|.+++.... .+++..+..++.||++||+||| +.+|+||||||+||+++.++ .+||+||
T Consensus 82 -~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 82 -DVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred -eEEEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEec
Confidence 4579999999999999997654 4899999999999999999999 89999999999999998877 8999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
|++........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||...... .....
T Consensus 157 g~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~------ 222 (283)
T 3bhy_A 157 GIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-----ETLTN------ 222 (283)
T ss_dssp TTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHH------
T ss_pred ccceeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-----HHHHH------
Confidence 99987654332 23456899999999999889999999999999999999999999763221 11111
Q ss_pred hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhhcccC
Q 037042 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKINDLD 992 (1002)
Q Consensus 935 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i~~~~ 992 (1002)
+......... ......+..+.+++.+||..+|++|||+.|+++| ++.++...
T Consensus 223 --~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 223 --ISAVNYDFDE----EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp --HHTTCCCCCH----HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred --hHhcccCCcc----hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence 1111100000 1112345678999999999999999999999986 45554433
No 201
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.1e-38 Score=342.93 Aligned_cols=256 Identities=25% Similarity=0.400 Sum_probs=204.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchh------
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK------ 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~------ 777 (1002)
..+|+..+.||+|+||.||+|+.. +++.||||++.... ..+.+|++++++++||||+++++++......
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 456899999999999999999875 79999999997653 3467899999999999999999988542110
Q ss_pred ------hHHHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEE
Q 037042 778 ------ALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAH 850 (1002)
Q Consensus 778 ------~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~k 850 (1002)
....++||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEE
Confidence 112469999999999999997643 36899999999999999999999 88999999999999999999999
Q ss_pred EecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 851 LSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 851 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
|+|||++........ .....||+.|+|||++.+..++.++|||||||++|||++|..|+.... .+...
T Consensus 163 l~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~~~~~-- 230 (284)
T 2a19_B 163 IGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-------KFFTD-- 230 (284)
T ss_dssp ECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------HHHHH--
T ss_pred ECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------HHHHH--
Confidence 999999987654432 234568999999999988889999999999999999999999875321 11111
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCCCC
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDFNG 995 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~~~ 995 (1002)
+.+.... ...+..+.+++.+||+.+|++|||+.|++++|+.++.....+
T Consensus 231 ------~~~~~~~----------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 231 ------LRDGIIS----------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp ------HHTTCCC----------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred ------hhccccc----------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 1111110 112345789999999999999999999999999998654443
No 202
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=356.99 Aligned_cols=265 Identities=12% Similarity=0.119 Sum_probs=205.9
Q ss_pred cCCCCCceeeccCcceEEEEEeCC---------CcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcce----------
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQD---------GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIK---------- 766 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 766 (1002)
++|+..+.||+|+||+||+|+... ++.||||++... ..+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 579999999999999999998653 789999998754 35788999999999999988
Q ss_pred -----eeeEEecCchhhHHHHHhhccCCCCChhHhhhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCC
Q 037042 767 -----IISCCSIGDFKALFKALALEYMPHGSLEKYLYSS-NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSN 840 (1002)
Q Consensus 767 -----~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~N 840 (1002)
+++++...+ ...++||||+ +++|.+++... ...+++..++.++.||++||+||| +++|+||||||+|
T Consensus 117 ~~i~~~~~~~~~~~---~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~N 189 (352)
T 2jii_A 117 LAIPTCMGFGVHQD---KYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAEN 189 (352)
T ss_dssp CSCCCCCEEEEETT---TEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGG
T ss_pred cCccchhhccccCC---cEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHH
Confidence 566665422 1457999999 99999999875 346999999999999999999999 8899999999999
Q ss_pred eeeCCCC--cEEEecccccccccCCCcee-----eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCc
Q 037042 841 VLLGDNM--VAHLSDFGITKLLTREDQFV-----TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTN 913 (1002)
Q Consensus 841 ILl~~~~--~~kl~DfGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~ 913 (1002)
|+++.++ .+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999988 99999999998765432211 1134478999999999999899999999999999999999999998
Q ss_pred ccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 914 EIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
................. .......+.... ....+..+.+++.+||..+|++|||++++++.|+++....
T Consensus 270 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 270 NCLPNTEDIMKQKQKFV-DKPGPFVGPCGH---------WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp GGTTCHHHHHHHHHHHH-HSCCCEECTTSC---------EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred cCCcCHHHHHHHHHhcc-CChhhhhhhccc---------cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 75433222222221111 111111111000 0112467899999999999999999999999999987543
No 203
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=5.7e-38 Score=344.48 Aligned_cols=252 Identities=18% Similarity=0.258 Sum_probs=206.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+ .
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~ 89 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----F 89 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----E
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC----E
Confidence 457899999999999999999865 58899999987542 234577889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++...+ .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 90 VFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp EEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 679999999999999987654 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... ......||+.|+|||+..+..++.++||||+|+++|||++|+.||...... +... .+...
T Consensus 166 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~--------~~~~~ 230 (294)
T 2rku_A 166 EYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYL--------RIKKN 230 (294)
T ss_dssp CSTTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH--------HHHTT
T ss_pred ccCcc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHH--------HHhhc
Confidence 53322 123456899999999998888999999999999999999999999763221 1111 11111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
.... +...+..+.+++.+||+.+|++|||++|+++|-.-
T Consensus 231 ~~~~--------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~ 269 (294)
T 2rku_A 231 EYSI--------PKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 269 (294)
T ss_dssp CCCC--------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred cCCC--------ccccCHHHHHHHHHHcccChhhCcCHHHHhhChhe
Confidence 1111 11234568899999999999999999999998663
No 204
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=8.2e-38 Score=341.43 Aligned_cols=252 Identities=25% Similarity=0.324 Sum_probs=197.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~ 96 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH----NMY 96 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----EEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCC----eEE
Confidence 356899999999999999999864 68999999987653 334678899999999999999999999998766 457
Q ss_pred HhhccCCCCChhHhhhcc---CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee---CCCCcEEEecccc
Q 037042 783 LALEYMPHGSLEKYLYSS---NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGI 856 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGl 856 (1002)
+||||+++|+|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||++ +.++.+||+|||+
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~ 173 (285)
T 3is5_A 97 IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGL 173 (285)
T ss_dssp EEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCC
T ss_pred EEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeec
Confidence 999999999999988653 246899999999999999999999 8999999999999999 4568899999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
++....... .....||+.|+|||++. +.++.++||||+||++|||++|+.||...... .........
T Consensus 174 a~~~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~-----~~~~~~~~~---- 240 (285)
T 3is5_A 174 AELFKSDEH---STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE-----EVQQKATYK---- 240 (285)
T ss_dssp CCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHHC----
T ss_pred ceecCCccc---CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH-----HHHhhhccC----
Confidence 987654322 24456899999999875 56899999999999999999999999763221 111110000
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
....... ....+..+.+++.+||+.||++|||+.|+++|-
T Consensus 241 --~~~~~~~-------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 280 (285)
T 3is5_A 241 --EPNYAVE-------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHE 280 (285)
T ss_dssp --CCCCCC---------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSG
T ss_pred --Ccccccc-------cCcCCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 0000000 001235688999999999999999999999863
No 205
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.1e-38 Score=344.84 Aligned_cols=254 Identities=22% Similarity=0.308 Sum_probs=200.2
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
..|...+.||+|+||+||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++..........+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34777889999999999999864 68899999987542 3446778999999999999999999998865322222457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCC--cEEccCCCCCeeeC-CCCcEEEeccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTP--VIHCDLKPSNVLLG-DNMVAHLSDFGITKL 859 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiHrDlkp~NILl~-~~~~~kl~DfGla~~ 859 (1002)
+||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+ |+||||||+||+++ .++.+||+|||++..
T Consensus 106 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 9999999999999997754 4899999999999999999999 777 99999999999997 789999999999976
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
...... ....||+.|+|||++. +.++.++||||+||++|||++|+.||...... ...... +..
T Consensus 182 ~~~~~~----~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~--------~~~ 244 (290)
T 1t4h_A 182 KRASFA----KAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA----AQIYRR--------VTS 244 (290)
T ss_dssp CCTTSB----EESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH----HHHHHH--------HTT
T ss_pred cccccc----ccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH----HHHHHH--------Hhc
Confidence 544322 3456899999999876 45899999999999999999999999763221 111111 111
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
...... .+...+..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 245 ~~~~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 285 (290)
T 1t4h_A 245 GVKPAS------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 285 (290)
T ss_dssp TCCCGG------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred cCCccc------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcc
Confidence 100000 11122356899999999999999999999998743
No 206
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=5.4e-38 Score=368.47 Aligned_cols=255 Identities=22% Similarity=0.308 Sum_probs=206.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|...+.||+|+||.||+|+.. +|+.||||++.+.. ......+.+|++++++++||||+++++++...+ .
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~----~ 259 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT----D 259 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----E
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC----E
Confidence 367888999999999999999865 69999999997542 233567889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccC---CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSN---YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
.++||||++||+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.+|.+||+|||++
T Consensus 260 l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla 336 (543)
T 3c4z_A 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336 (543)
T ss_dssp EEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeeccee
Confidence 689999999999999987643 36899999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
+.+..... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||....... ....+... +
T Consensus 337 ~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~--------i 405 (543)
T 3c4z_A 337 VELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQR--------V 405 (543)
T ss_dssp EECCTTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHH--------H
T ss_pred eeccCCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHH--------H
Confidence 87654432 1234579999999999999999999999999999999999999997643211 11222111 1
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH-----HHHHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA-----KEIVTRL 985 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~-----~evl~~L 985 (1002)
....... +...+..+.+++.+||+.+|++||++ .|+++|-
T Consensus 406 ~~~~~~~--------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hp 450 (543)
T 3c4z_A 406 LEQAVTY--------PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHP 450 (543)
T ss_dssp HHCCCCC--------CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSG
T ss_pred hhcccCC--------CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCc
Confidence 1111111 12234678899999999999999964 7787763
No 207
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.9e-37 Score=358.73 Aligned_cols=319 Identities=20% Similarity=0.181 Sum_probs=213.2
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N 136 (1002)
.++.++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..| ..|.++++|++|+|++|
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEP-GAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeCh-hhhhCCccCCEEECCCC
Confidence 4555666676 6777664 588999999999998778888889999999999998885444 44577888888888888
Q ss_pred cccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCC
Q 037042 137 MFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIP 216 (1002)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p 216 (1002)
++++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++|.+++ ..|
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~-------------------------~~~ 145 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY-------------------------ISH 145 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCE-------------------------ECT
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccce-------------------------eCh
Confidence 8886666678888888888888888887778888888888888888888874 235
Q ss_pred ccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccC
Q 037042 217 NEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNAS 296 (1002)
Q Consensus 217 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 296 (1002)
..|.++++|++|+|++|++++..+..+.++++|+.|+|++|++. +..+..|..++
T Consensus 146 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~-------------------------~~~~~~~~~l~ 200 (477)
T 2id5_A 146 RAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNIN-------------------------AIRDYSFKRLY 200 (477)
T ss_dssp TSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCC-------------------------EECTTCSCSCT
T ss_pred hhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCc-------------------------EeChhhcccCc
Confidence 56778888888888888888766666666666666666666654 33333444444
Q ss_pred CCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccccccccccc
Q 037042 297 KLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHS 376 (1002)
Q Consensus 297 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 376 (1002)
+|++|+|++|.+.+.+|..+....+|++|+|++|+++.++... +.++++|+.|+|++|.|.++
T Consensus 201 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~-----~~~l~~L~~L~Ls~n~l~~~------------ 263 (477)
T 2id5_A 201 RLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLA-----VRHLVYLRFLNLSYNPISTI------------ 263 (477)
T ss_dssp TCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHH-----HTTCTTCCEEECCSSCCCEE------------
T ss_pred ccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHH-----hcCccccCeeECCCCcCCcc------------
Confidence 4555555554444444444444445555555555555544321 34444455554444444322
Q ss_pred ccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccC
Q 037042 377 LKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSN 456 (1002)
Q Consensus 377 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 456 (1002)
.+..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++
T Consensus 264 --------------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 329 (477)
T 2id5_A 264 --------------EGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDS 329 (477)
T ss_dssp --------------CTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCS
T ss_pred --------------ChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccC
Confidence 233455556666666666666666666666666666666666666655555556666666666666
Q ss_pred CcCC
Q 037042 457 NKLS 460 (1002)
Q Consensus 457 N~l~ 460 (1002)
|.+.
T Consensus 330 N~l~ 333 (477)
T 2id5_A 330 NPLA 333 (477)
T ss_dssp SCEE
T ss_pred CCcc
Confidence 6654
No 208
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.4e-38 Score=349.22 Aligned_cols=253 Identities=21% Similarity=0.287 Sum_probs=202.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|...+.||+|+||.||+|+.. +|+.||+|++..........+.+|++++++++||||+++++++...+ ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~l 83 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTT----HYYL 83 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSS----EEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCC----EEEE
Confidence 457889999999999999999865 79999999998665445567889999999999999999999998766 5579
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee---CCCCcEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla~~~ 860 (1002)
||||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++...
T Consensus 84 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 84 VMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp EECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred EEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 999999999999987654 4899999999999999999999 8999999999999999 78899999999999754
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..... +..+
T Consensus 160 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~--------i~~~ 222 (304)
T 2jam_A 160 QNGI----MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES-----KLFEK--------IKEG 222 (304)
T ss_dssp CCBT----THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHH--------HHHC
T ss_pred CCCc----cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-----HHHHH--------HHcC
Confidence 4321 12345889999999999999999999999999999999999999763221 11111 1111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
...... ......+..+.+++.+||..+|++|||+.|+++|-+
T Consensus 223 ~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (304)
T 2jam_A 223 YYEFES----PFWDDISESAKDFICHLLEKDPNERYTCEKALSHPW 264 (304)
T ss_dssp CCCCCT----TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred CCCCCc----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence 100000 001224567899999999999999999999998755
No 209
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-38 Score=357.50 Aligned_cols=267 Identities=21% Similarity=0.245 Sum_probs=196.9
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh--hH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK--AL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~ 779 (1002)
.++|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...... ..
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46799999999999999999986 469999999986432 33456788999999999999999999998765321 11
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+ +++|.+++... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 247999999 88999999763 4899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--hh-h
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--SI-M 935 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~-~ 935 (1002)
.... .....+|..|+|||++.+ ..++.++||||+||++|||++|+.||....... .+.......... .. .
T Consensus 178 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 178 ADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp CCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHH
T ss_pred cccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHH
Confidence 5432 244578999999998776 679999999999999999999999997642211 111111100000 00 0
Q ss_pred hcc--------c--CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 936 KIV--------D--GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 936 ~i~--------~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.+. . +....... . ......+..+.+++.+||..||++|||+.|+++|-
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp 309 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDF-A-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 309 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCG-G-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred HhhhHHHHHHHHhCCCCCCCCH-H-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcCh
Confidence 000 0 00000000 0 00122356789999999999999999999999983
No 210
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.1e-38 Score=356.56 Aligned_cols=283 Identities=18% Similarity=0.175 Sum_probs=205.6
Q ss_pred cCHHHHHHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccc-----------hhHHHHHHHHHHHHhccCCCc
Q 037042 696 FSYLELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCG-----------RAFKSFDVECEVMKSIRHRNI 764 (1002)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~ni 764 (1002)
....++....++|+..+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 345677788899999999999999999999988899999999864321 123778999999999999999
Q ss_pred ceeeeEEecCch-hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee
Q 037042 765 IKIISCCSIGDF-KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL 843 (1002)
Q Consensus 765 v~~~~~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl 843 (1002)
+++++++...+. .....++||||++ |+|.+++...+..+++..+..++.||+.||+||| +.+|+||||||+||++
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILL 167 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEE
Confidence 999999865331 1123479999997 6999988877667999999999999999999999 8899999999999999
Q ss_pred CCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccH
Q 037042 844 GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTL 922 (1002)
Q Consensus 844 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~ 922 (1002)
+.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ..
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~ 243 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QL 243 (362)
T ss_dssp CTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HH
T ss_pred cCCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HH
Confidence 999999999999997544332 2234568999999998776 678999999999999999999999997642211 11
Q ss_pred HHHHHHHHhhh-----------hhhcccCccC-ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 923 KHWVNDWLLIS-----------IMKIVDGSLL-SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 923 ~~~~~~~~~~~-----------~~~i~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
........... .......... .............+..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 319 (362)
T 3pg1_A 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319 (362)
T ss_dssp HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCch
Confidence 11111000000 0000000000 0000011112234567899999999999999999999999843
No 211
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.4e-38 Score=352.43 Aligned_cols=270 Identities=23% Similarity=0.325 Sum_probs=201.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc--hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG--RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++...+ ..
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~ 99 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK----RW 99 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----EE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC----EE
Confidence 467999999999999999999865 589999999865432 33566789999999999999999999998766 45
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||+++++|.++....+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 100 ~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 100 YLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp EEEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred EEEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 79999999999988876544 4899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHH-----------H
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVND-----------W 929 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~-----------~ 929 (1002)
.... ......||..|+|||++.+. .++.++||||+||++|||++|+.||........ ....... +
T Consensus 176 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 252 (331)
T 4aaa_A 176 APGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMCLGNLIPRHQELF 252 (331)
T ss_dssp ----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHH
T ss_pred CCcc--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhhhHh
Confidence 4322 22345789999999988775 689999999999999999999999976432211 1111110 0
Q ss_pred Hhhh-hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 930 LLIS-IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 930 ~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... ......+......... .....++..+.+++.+||+.||++|||++|+++|-+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~ 309 (331)
T 4aaa_A 253 NKNPVFAGVRLPEIKEREPLE-RRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309 (331)
T ss_dssp HHCGGGTTCCCCCCSSCCCHH-HHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred hhccccccccCccccccchhh-hcccchhHHHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 0000 0111111111111111 111235677999999999999999999999998743
No 212
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.8e-38 Score=347.96 Aligned_cols=262 Identities=26% Similarity=0.365 Sum_probs=199.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC--CCc--EEEEEEeecc---cchhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ--DGM--EVAVKVFNQQ---CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
.++|+..+.||+|+||+||+|++. +++ .||||+++.. .....+.+.+|++++++++||||+++++++....
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC--
Confidence 357899999999999999999853 333 6899998754 2345678899999999999999999999997654
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
.++|+||+++|+|.+++...+..+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 95 ---~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~ 168 (291)
T 1u46_A 95 ---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLM 168 (291)
T ss_dssp ---CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred ---ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccc
Confidence 46999999999999999876667899999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCcee-eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 858 KLLTREDQFV-TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 858 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
.......... ......+|..|+|||+..+..++.++|||||||++|||++ |+.||...... .....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~------- 236 (291)
T 1u46_A 169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-----QILHK------- 236 (291)
T ss_dssp EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHH-------
T ss_pred ccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-----HHHHH-------
Confidence 8775543322 2234567888999999988889999999999999999999 99999764221 11111
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
+........ .+..++..+.+++.+||..+|++|||+.+++++|+++...+.
T Consensus 237 -~~~~~~~~~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 287 (291)
T 1u46_A 237 -IDKEGERLP------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM 287 (291)
T ss_dssp -HHTSCCCCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred -HHccCCCCC------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence 111000000 012345678999999999999999999999999999876543
No 213
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.5e-38 Score=354.81 Aligned_cols=271 Identities=21% Similarity=0.238 Sum_probs=196.8
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
..++|++.+.||+|+||+||+|+.. +++.||||+++... ......+.+|++++++++||||+++++++...+ .
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~ 107 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH----R 107 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETT----E
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCC----E
Confidence 4568999999999999999999854 78999999997543 223456778999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee-----CCCCcEEEeccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL-----GDNMVAHLSDFG 855 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl-----~~~~~~kl~DfG 855 (1002)
.++||||+++ +|.+++..... +++..+..++.||+.||+||| +++|+||||||+||++ +.++.+||+|||
T Consensus 108 ~~lv~e~~~~-~L~~~~~~~~~-~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 108 LHLIFEYAEN-DLKKYMDKNPD-VSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEEEEECCSE-EHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEEEEecCCC-CHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 6799999975 99999977654 899999999999999999999 8999999999999999 455669999999
Q ss_pred ccccccCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh-
Q 037042 856 ITKLLTREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS- 933 (1002)
Q Consensus 856 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~- 933 (1002)
+++....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||....... .+...........
T Consensus 183 ~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~ 259 (329)
T 3gbz_A 183 LARAFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFKIFEVLGLPDD 259 (329)
T ss_dssp HHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCT
T ss_pred CccccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHHHHHHhCCCch
Confidence 9987653322 22445689999999998774 48999999999999999999999997642211 1111111100000
Q ss_pred --hhhcc-----cCcc--CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 934 --IMKIV-----DGSL--LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 934 --~~~i~-----~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..... .... ..........+......+.+++.+||++||++|||++|+++|-+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 321 (329)
T 3gbz_A 260 TTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321 (329)
T ss_dssp TTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred hhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcc
Confidence 00000 0000 00011111222234577899999999999999999999999865
No 214
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.6e-38 Score=351.40 Aligned_cols=267 Identities=17% Similarity=0.213 Sum_probs=203.8
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+. .+++.||||++... ..+.+.+|++++++++ ||||+++++++...... ..+
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~--~~~ 109 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSR--TPA 109 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTC--CEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCC--ceE
Confidence 35799999999999999999985 57899999998753 3467889999999997 99999999999763221 446
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC-cEEEeccccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-VAHLSDFGITKLLT 861 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~~ 861 (1002)
+||||+++++|.+++.. +++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|||+++...
T Consensus 110 lv~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp EEEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EEEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 99999999999999853 788999999999999999999 89999999999999999776 89999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
.... .....||..|+|||++.+ ..++.++||||+||++|||++|+.||.........+................+.
T Consensus 183 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 183 PGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp TTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHH
Confidence 4432 234578999999998876 668999999999999999999999996543332222222221111111111000
Q ss_pred cc-----------------CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SL-----------------LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~-----------------~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.. ..............+..+.+++.+||++||++|||++|+++|-+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~ 322 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 322 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGG
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCcc
Confidence 00 00000000111224577899999999999999999999998744
No 215
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.6e-38 Score=346.58 Aligned_cols=257 Identities=24% Similarity=0.376 Sum_probs=203.8
Q ss_pred hcCCCCCc-eeeccCcceEEEEEe---CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh
Q 037042 705 TDGFSENN-LIGRGGFGSVYKARI---QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 705 ~~~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 778 (1002)
..+|+..+ .||+|+||+||+|.+ .+++.||||+++... ....+.+.+|++++++++||||+++++++...
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 90 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---- 90 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS----
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCC----
Confidence 35677777 999999999999964 247889999997543 33467899999999999999999999999443
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
..++||||+++++|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 91 -~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 91 -SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp -SEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred -CcEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 3469999999999999998754 4899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCcee-eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 859 LLTREDQFV-TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 859 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ..... +.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~-----~~- 234 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVTAM-----LE- 234 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHH-----HH-
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHH-----HH-
Confidence 775543322 2233456788999999988889999999999999999999 99999764221 11110 00
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... .+..++..+.+++.+||+.+|++||++.|+++.|+++-.
T Consensus 235 --~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 235 --KGERMG-------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp --TTCCCC-------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred --cCCCCC-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 000000 112345678999999999999999999999999998753
No 216
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=6.1e-38 Score=369.10 Aligned_cols=253 Identities=21% Similarity=0.284 Sum_probs=203.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|++.+.||+|+||+||+|+.. +++.||||++.+.. ......+.+|++++++++||||+++++++.... ..
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~ 96 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS----SF 96 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----EE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC----EE
Confidence 457999999999999999999865 78999999986432 234577899999999999999999999998766 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC---CCCcEEEecccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG---DNMVAHLSDFGITK 858 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGla~ 858 (1002)
++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++ .++.+||+|||+++
T Consensus 97 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 97 YIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 79999999999999887654 4899999999999999999999 89999999999999995 56789999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... .....||+.|+|||++.+ .|+.++||||+||++|||++|+.||...... +.... +.
T Consensus 173 ~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~--------i~ 235 (486)
T 3mwu_A 173 CFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-----DILKR--------VE 235 (486)
T ss_dssp TBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH--------HH
T ss_pred ECCCCCc---cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH--------HH
Confidence 7654332 245579999999999865 5899999999999999999999999763221 11111 11
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+....... ....++..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 236 ~~~~~~~~~----~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~ 279 (486)
T 3mwu_A 236 TGKYAFDLP----QWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279 (486)
T ss_dssp HTCCCSCSG----GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHH
T ss_pred hCCCCCCCc----ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHh
Confidence 111111000 11234567889999999999999999999999855
No 217
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=6e-39 Score=365.04 Aligned_cols=245 Identities=14% Similarity=0.123 Sum_probs=189.4
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc---cchhHHHHHHHHH---HHHhccCCCcceee-------eE
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ---CGRAFKSFDVECE---VMKSIRHRNIIKII-------SC 770 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~h~niv~~~-------~~ 770 (1002)
.++|+..+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|++ .+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45688899999999999999985 56999999999743 3345678899994 55556899999998 55
Q ss_pred EecCch----------hh---HHHHHhhccCCCCChhHhhhccCC------cCCHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 037042 771 CSIGDF----------KA---LFKALALEYMPHGSLEKYLYSSNY------ILDIFQRLNIMIDVASALEYLYFGYSTPV 831 (1002)
Q Consensus 771 ~~~~~~----------~~---~~~~lv~e~~~~g~L~~~l~~~~~------~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 831 (1002)
+...+. .. ...++||||+ +|+|.+++...+. .+++..++.|+.||++||+||| +++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 544321 00 0146999999 6899999986432 2335788889999999999999 8999
Q ss_pred EEccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCC-----------CcCcccchHHHHH
Q 037042 832 IHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG-----------RVSTNGDVYNFGV 900 (1002)
Q Consensus 832 iHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwSlGv 900 (1002)
+||||||+|||++.++.+||+|||+|+.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999986432 2234567 899999998877 8999999999999
Q ss_pred HHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHH
Q 037042 901 MLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKE 980 (1002)
Q Consensus 901 ~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~e 980 (1002)
++|||++|+.||........ ...+.... ..++..+.+++.+||+.||++|||+.|
T Consensus 302 il~elltg~~Pf~~~~~~~~-------------~~~~~~~~------------~~~~~~~~~li~~~L~~dp~~Rpt~~e 356 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGG-------------SEWIFRSC------------KNIPQPVRALLEGFLRYPKEDRLLPLQ 356 (377)
T ss_dssp HHHHHHHSSCCC------CC-------------SGGGGSSC------------CCCCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred HHHHHHHCCCCCcccccccc-------------hhhhhhhc------------cCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence 99999999999976432211 11111110 123466889999999999999999999
Q ss_pred HHHH
Q 037042 981 IVTR 984 (1002)
Q Consensus 981 vl~~ 984 (1002)
+++|
T Consensus 357 ~l~h 360 (377)
T 3byv_A 357 AMET 360 (377)
T ss_dssp HHTS
T ss_pred HhhC
Confidence 9985
No 218
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.4e-38 Score=354.61 Aligned_cols=262 Identities=20% Similarity=0.273 Sum_probs=204.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~ 107 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG----EIS 107 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT----EEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC----EEE
Confidence 357999999999999999999865 68999999997653 344577899999999999999999999998766 467
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCC-CcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST-PVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
+||||+++|+|.+++...+ .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||++....
T Consensus 108 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 108 ICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp EEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred EEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 9999999999999997765 4899999999999999999999 64 89999999999999999999999999997654
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh----------
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL---------- 931 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~---------- 931 (1002)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .........
T Consensus 184 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 257 (360)
T 3eqc_A 184 DSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL--ELMFGCQVEGDAAETPPRP 257 (360)
T ss_dssp HHC--------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHH--HHHHC--------------
T ss_pred ccc----ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHhcccccccCCCCCCCc
Confidence 322 1345789999999999999999999999999999999999999976432211 000000000
Q ss_pred ---h--------------h----hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 932 ---I--------------S----IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 932 ---~--------------~----~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
. . ...+....... ......+..+.+++.+||+.||++|||++|+++|-+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 327 (360)
T 3eqc_A 258 RTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPK------LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 327 (360)
T ss_dssp ----------------CCCHHHHHHHHHHSCCCC------CCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred ccCCCcccccccCCCCcccchhhhhHHhccCCCC------CCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence 0 0 00000000000 001123457899999999999999999999999855
No 219
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.6e-38 Score=353.25 Aligned_cols=262 Identities=23% Similarity=0.278 Sum_probs=191.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCch----hh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDF----KA 778 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~----~~ 778 (1002)
..+|+..+.||+|+||.||+|+.. +++.||||++..........+.+|+.+++++. ||||+++++++..+.. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 357899999999999999999864 68999999987766666778899999999996 9999999999853321 11
Q ss_pred HHHHHhhccCCCCChhHhhhc--cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCC--cEEccCCCCCeeeCCCCcEEEecc
Q 037042 779 LFKALALEYMPHGSLEKYLYS--SNYILDIFQRLNIMIDVASALEYLYFGYSTP--VIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
...++||||++ |+|.+++.. ....+++..++.++.||+.||+||| +.+ |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 13479999996 699998865 3346899999999999999999999 788 999999999999999999999999
Q ss_pred cccccccCCCcee----------eeccCCCCccccccccc---CCCCcCcccchHHHHHHHHHHHhCCCCCccccccccc
Q 037042 855 GITKLLTREDQFV----------TQTQTPATIGYMALEYG---SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMT 921 (1002)
Q Consensus 855 Gla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~ 921 (1002)
|+++......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||.......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-- 260 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-- 260 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH--
Confidence 9998765432211 11234589999999987 56678999999999999999999999996532211
Q ss_pred HHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 922 LKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
+......... ....+..+.+++.+||+.+|++|||+.|++++|+++.....
T Consensus 261 ---------------~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 261 ---------------IVNGKYSIPP------HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp --------------------CCCCT------TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred ---------------hhcCcccCCc------ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 1111100000 01122447889999999999999999999999999986543
No 220
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.1e-38 Score=362.21 Aligned_cols=259 Identities=11% Similarity=0.071 Sum_probs=184.7
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc---hhHHHHHHHHHHHHhc--cCCCcceee-------eEEe
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG---RAFKSFDVECEVMKSI--RHRNIIKII-------SCCS 772 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~~~-------~~~~ 772 (1002)
..|+..+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45888999999999999999865 789999999987532 3456677886555555 699988755 3333
Q ss_pred cCchhh-------------HHHHHhhccCCCCChhHhhhccCCcCCHHHH------HHHHHHHHHHHHHHHcCCCCCcEE
Q 037042 773 IGDFKA-------------LFKALALEYMPHGSLEKYLYSSNYILDIFQR------LNIMIDVASALEYLYFGYSTPVIH 833 (1002)
Q Consensus 773 ~~~~~~-------------~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~iiH 833 (1002)
...... ...++||||++ |+|.+++...+..+++..+ ..++.||++||+||| +++|+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCcc
Confidence 222100 12479999998 8999999875444555566 788899999999999 899999
Q ss_pred ccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCC--CCcCcccchHHHHHHHHHHHhCCCC
Q 037042 834 CDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE--GRVSTNGDVYNFGVMLMETFTGKKP 911 (1002)
Q Consensus 834 rDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~P 911 (1002)
|||||+|||++.++.+||+|||+|+...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999998664321 14456799999999887 6799999999999999999999999
Q ss_pred CcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 912 TNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
|.......... | ................ ....++..+.+++.+||+.||++|||+.|+++|-
T Consensus 293 f~~~~~~~~~~--~----~~~~~~~~~~~~~~~~------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 354 (371)
T 3q60_A 293 FGLVTPGIKGS--W----KRPSLRVPGTDSLAFG------SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETP 354 (371)
T ss_dssp TTBCCTTCTTC--C----CBCCTTSCCCCSCCCT------TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSH
T ss_pred CCCcCcccccc--h----hhhhhhhccccccchh------hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCH
Confidence 98753321100 0 0000000000010000 1123456789999999999999999999999763
No 221
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.1e-38 Score=349.32 Aligned_cols=254 Identities=23% Similarity=0.298 Sum_probs=200.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~l 783 (1002)
.++|++.+.||+|+||+||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++...+ ..++
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~l 93 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG----KLWI 93 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-----CEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC----eEEE
Confidence 467999999999999999999875 58999999997665556788999999999999999999999998765 5579
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCC
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTRE 863 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 863 (1002)
||||+++++|.+++......+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 94 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 94 MIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp EEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred EEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 99999999999998876667999999999999999999999 899999999999999999999999999998643321
Q ss_pred CceeeeccCCCCccccccccc-----CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 864 DQFVTQTQTPATIGYMALEYG-----SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 864 ~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
.. ......||..|+|||++ ....++.++|||||||++|||++|+.||...... ..... +....
T Consensus 171 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~-----~~~~~ 238 (302)
T 2j7t_A 171 LQ--KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-----RVLLK-----IAKSD 238 (302)
T ss_dssp HH--C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHH-----HHHSC
T ss_pred cc--ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-----HHHHH-----HhccC
Confidence 11 11335689999999987 4667899999999999999999999999764221 11111 00000
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.+... .+..++..+.+++.+||+.+|++|||+.|+++|-
T Consensus 239 ~~~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 277 (302)
T 2j7t_A 239 PPTLL--------TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHP 277 (302)
T ss_dssp CCCCS--------SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTST
T ss_pred CcccC--------CccccCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 00000 1122346788999999999999999999999863
No 222
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=7.8e-38 Score=349.93 Aligned_cols=251 Identities=18% Similarity=0.259 Sum_probs=206.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
..+|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+ .
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~ 115 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----F 115 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----E
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC----e
Confidence 457899999999999999999865 58899999987542 234577889999999999999999999998776 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++...+ .+++..++.++.||++||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 116 ~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 116 VFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp EEEEECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 679999999999999987654 4899999999999999999999 899999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
..... ......||..|+|||++.+..++.++|||||||++|||++|+.||...... +.... +...
T Consensus 192 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~--------~~~~ 256 (335)
T 2owb_A 192 EYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYLR--------IKKN 256 (335)
T ss_dssp CSTTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHH--------HHHT
T ss_pred ccCcc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH-----HHHHH--------HhcC
Confidence 53322 223457899999999998888999999999999999999999999753211 11111 1011
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... +..+...+.+++.+||+.||++|||+.|+++|-+
T Consensus 257 ~~~~--------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~ 294 (335)
T 2owb_A 257 EYSI--------PKHINPVAASLIQKMLQTDPTARPTINELLNDEF 294 (335)
T ss_dssp CCCC--------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred CCCC--------CccCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence 1100 1123456889999999999999999999999865
No 223
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-38 Score=354.82 Aligned_cols=272 Identities=21% Similarity=0.222 Sum_probs=200.5
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc-----hhHHHHHHHHHHHHhccCCCcceeeeEEecCchh
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG-----RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 777 (1002)
..++|+..+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++...+
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 85 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS-- 85 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC--
Confidence 4568999999999999999999865 689999999874321 12346788999999999999999999997665
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
..++||||+++ +|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 86 --~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (346)
T 1ua2_A 86 --NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLA 159 (346)
T ss_dssp --CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred --ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccc
Confidence 56799999986 899998877667888999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhh-
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM- 935 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~- 935 (1002)
+....... ......||+.|+|||++.+. .++.++|||||||++|||++|.+||...... ..+.............
T Consensus 160 ~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~ 236 (346)
T 1ua2_A 160 KSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQ 236 (346)
T ss_dssp STTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTT
T ss_pred eeccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcCCCChhh
Confidence 87654332 22456789999999988654 5899999999999999999999998764221 1111111111000000
Q ss_pred -----hcccCccCC--hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 936 -----KIVDGSLLS--REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 936 -----~i~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
...+..... ...........++..+.+++.+||..||++|||+.|+++|-+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~ 294 (346)
T 1ua2_A 237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294 (346)
T ss_dssp SSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred hhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence 000000000 000000011234567999999999999999999999999866
No 224
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.2e-38 Score=350.35 Aligned_cols=257 Identities=31% Similarity=0.508 Sum_probs=202.9
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcE--EEEEEeeccc-chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGME--VAVKVFNQQC-GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 780 (1002)
++|+..+.||+|+||.||+|+.. ++.. ||||++.... ....+.+.+|+++++++ +||||+++++++...+ .
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~----~ 100 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----Y 100 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT----E
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC----c
Confidence 57899999999999999999854 5664 4999887532 33456788999999999 8999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccC---------------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC
Q 037042 781 KALALEYMPHGSLEKYLYSSN---------------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD 845 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~ 845 (1002)
.++||||+++|+|.+++...+ ..+++..++.++.||++||+||| +++|+||||||+||+++.
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~ 177 (327)
T 1fvr_A 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGE 177 (327)
T ss_dssp EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECG
T ss_pred eEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcC
Confidence 679999999999999997654 36899999999999999999999 899999999999999999
Q ss_pred CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHH
Q 037042 846 NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKH 924 (1002)
Q Consensus 846 ~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~ 924 (1002)
++.+||+|||+++...... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .
T Consensus 178 ~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~ 249 (327)
T 1fvr_A 178 NYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----E 249 (327)
T ss_dssp GGCEEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----H
T ss_pred CCeEEEcccCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-----H
Confidence 9999999999997433211 1233456888999999988889999999999999999998 99999763221 1
Q ss_pred HHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccC
Q 037042 925 WVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLD 992 (1002)
Q Consensus 925 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~ 992 (1002)
... .+....... .+..++..+.+++.+||..+|++|||+.|++++|+++....
T Consensus 250 ~~~--------~~~~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 250 LYE--------KLPQGYRLE-------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp HHH--------HGGGTCCCC-------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHH--------HhhcCCCCC-------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 111 111110000 01123467899999999999999999999999999876543
No 225
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5.5e-38 Score=370.08 Aligned_cols=253 Identities=20% Similarity=0.298 Sum_probs=199.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||+||+|+.. ++..||||++.+.. ......+.+|+.++++++||||+++++++.... ..
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~ 111 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR----NY 111 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS----EE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC----EE
Confidence 346999999999999999999865 68999999997543 234577889999999999999999999998766 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCcEEEecccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMVAHLSDFGITK 858 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla~ 858 (1002)
++||||+++|+|.+++.... .+++..+..++.||++||+||| +++|+||||||+||+++. ++.+||+|||+++
T Consensus 112 ~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 112 YLVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 79999999999999887654 4899999999999999999999 899999999999999975 4569999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... .....||+.|+|||++. +.|+.++||||+||++|||++|+.||...... +.... +.
T Consensus 188 ~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~--------i~ 250 (494)
T 3lij_A 188 VFENQKK---MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-----EILRK--------VE 250 (494)
T ss_dssp ECBTTBC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH--------HH
T ss_pred ECCCCcc---ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH--------HH
Confidence 7664432 24467999999999876 56999999999999999999999999764221 11111 11
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
......... ....++..+.+++.+||+++|.+|||+.|+++|-+
T Consensus 251 ~~~~~~~~~----~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~ 294 (494)
T 3lij_A 251 KGKYTFDSP----EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW 294 (494)
T ss_dssp HTCCCCCSG----GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred hCCCCCCch----hcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcc
Confidence 111111000 01224567889999999999999999999998733
No 226
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.2e-38 Score=378.80 Aligned_cols=250 Identities=25% Similarity=0.392 Sum_probs=198.7
Q ss_pred ceeeccCcceEEEEEeC---CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQ---DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+.||+|+||+||+|.+. .++.||||+++... ....+.+.+|++++++++|||||++++++.... .++|||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~~lv~E 449 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-----WMLVME 449 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSS-----EEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----EEEEEE
Confidence 47999999999999643 46889999997643 234678999999999999999999999996543 469999
Q ss_pred cCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCce
Q 037042 787 YMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQF 866 (1002)
Q Consensus 787 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 866 (1002)
|+++|+|.+++...+ .+++..+..|+.||+.||+||| +++|+||||||+|||++.++.+||+|||+++.+......
T Consensus 450 ~~~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 450 MAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp CCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred ccCCCCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 999999999997654 4899999999999999999999 899999999999999999999999999999877544322
Q ss_pred -eeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcccCccCC
Q 037042 867 -VTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLS 944 (1002)
Q Consensus 867 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 944 (1002)
.......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... .... +..+....
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-----~~~~--------i~~~~~~~ 592 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-----VTAM--------LEKGERMG 592 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----HHHH--------HHTTCCCC
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHH--------HHcCCCCC
Confidence 22234457889999999998899999999999999999998 999997643211 1111 11111000
Q ss_pred hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 945 REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 945 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
.+..++..+.++|.+||+.+|++||++.+|++.|+++-.
T Consensus 593 -------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 593 -------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -------CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 112355779999999999999999999999999998753
No 227
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.1e-37 Score=368.45 Aligned_cols=254 Identities=21% Similarity=0.297 Sum_probs=203.5
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccc-------------hhHHHHHHHHHHHHhccCCCcceeee
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG-------------RAFKSFDVECEVMKSIRHRNIIKIIS 769 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~ 769 (1002)
..++|++.++||+|+||+||+|+.. +++.||||++.+... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3568999999999999999999865 688999999875421 23567889999999999999999999
Q ss_pred EEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCC--
Q 037042 770 CCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNM-- 847 (1002)
Q Consensus 770 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~-- 847 (1002)
++.... ..++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++
T Consensus 114 ~~~~~~----~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 114 VFEDKK----YFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEECSS----EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCC
T ss_pred EEEcCC----EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCC
Confidence 998776 5679999999999999987654 4899999999999999999999 89999999999999998765
Q ss_pred -cEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHH
Q 037042 848 -VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWV 926 (1002)
Q Consensus 848 -~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~ 926 (1002)
.+||+|||+++....... .....||+.|+|||++. +.|+.++||||+||++|+|++|+.||...... +..
T Consensus 186 ~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~ 256 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKDYK---LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-----DII 256 (504)
T ss_dssp SSEEECCCTTCEECCTTSC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHH
T ss_pred ccEEEEECCCCEEcCCCCc---cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHH
Confidence 699999999987755432 24457999999999876 46899999999999999999999999763221 111
Q ss_pred HHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 927 NDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 927 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
. .+..+...... .....++..+.+++.+||.++|.+|||++|+++|-+
T Consensus 257 ~--------~i~~~~~~~~~----~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 304 (504)
T 3q5i_A 257 K--------KVEKGKYYFDF----NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRW 304 (504)
T ss_dssp H--------HHHHCCCCCCH----HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred H--------HHHcCCCCCCc----cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHh
Confidence 1 11111111111 111234567899999999999999999999999865
No 228
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3.6e-38 Score=371.20 Aligned_cols=253 Identities=23% Similarity=0.322 Sum_probs=205.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||+||+|+.. +|+.||||++.+.. ......+.+|++++++++||||+++++++.... .
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~ 100 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG----Y 100 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----E
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC----E
Confidence 356999999999999999999865 79999999986542 334678899999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee---CCCCcEEEeccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGIT 857 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla 857 (1002)
.++||||+.+|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||++ +.++.+||+|||++
T Consensus 101 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 101 FYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EEEEECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 679999999999999987655 4899999999999999999999 8999999999999999 56789999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
+.+..... .....||+.|+|||++.+ .|+.++||||+||++|||++|+.||...... +... .+
T Consensus 177 ~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~--------~i 239 (484)
T 3nyv_A 177 THFEASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY-----DILK--------KV 239 (484)
T ss_dssp HHBCCCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HH
T ss_pred EEcccccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-----HHHH--------HH
Confidence 87754432 234569999999998765 6899999999999999999999999763221 1111 11
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+....... ....++..+.+++.+||+++|++|||+.|+++|-+
T Consensus 240 ~~~~~~~~~~----~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~ 284 (484)
T 3nyv_A 240 EKGKYTFELP----QWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284 (484)
T ss_dssp HHCCCCCCSG----GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred HcCCCCCCCc----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChh
Confidence 1111111100 11234567889999999999999999999999865
No 229
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=8e-38 Score=379.80 Aligned_cols=251 Identities=21% Similarity=0.261 Sum_probs=205.9
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhh
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 778 (1002)
..++|+..+.||+|+||.||+|+.. +++.||||++++.. ......+..|.+++..+ +||+|+++++++...+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--- 415 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--- 415 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS---
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC---
Confidence 3567999999999999999999865 68899999997542 23456778899999988 7999999999998766
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
..++||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+
T Consensus 416 -~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 416 -RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred -EEEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceee
Confidence 5679999999999999998765 4899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... .....+||+.|+|||++.+..|+.++|||||||++|||++|+.||...... +. ...+.
T Consensus 491 ~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~-----~~--------~~~i~ 555 (674)
T 3pfq_A 491 ENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----EL--------FQSIM 555 (674)
T ss_dssp ECCCTTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HH--------HHHHH
T ss_pred ccccCCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH-----HH--------HHHHH
Confidence 6443322 234567999999999999999999999999999999999999999763221 11 11222
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCH-----HHHHHHH
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINA-----KEIVTRL 985 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~-----~evl~~L 985 (1002)
......+ ...+..+.+++.+||+.||++||++ +||++|-
T Consensus 556 ~~~~~~p--------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ 599 (674)
T 3pfq_A 556 EHNVAYP--------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 599 (674)
T ss_dssp SSCCCCC--------TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSG
T ss_pred hCCCCCC--------ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCc
Confidence 2222111 2245678999999999999999997 7888763
No 230
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.1e-38 Score=352.05 Aligned_cols=276 Identities=18% Similarity=0.245 Sum_probs=204.5
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh----
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK---- 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---- 777 (1002)
.++|++.+.||+|+||+||+|+. .+|+.||||++.... ......+.+|++++++++||||+++++++......
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 45799999999999999999986 579999999986543 22346778999999999999999999998765421
Q ss_pred hHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
....++||||+++ ++.+.+......+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 1124699999975 888888776667999999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCCc--eeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--
Q 037042 858 KLLTREDQ--FVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI-- 932 (1002)
Q Consensus 858 ~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~-- 932 (1002)
+.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ... +......
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~-i~~~~~~~~ 249 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ-LAL-ISQLCGSIT 249 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHH-HHHHHCCCC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH-HHH-HHHHhCCCC
Confidence 87653221 122345678999999998776 4589999999999999999999999976432211 111 1110000
Q ss_pred -hhh-hc-----ccCc----cCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 933 -SIM-KI-----VDGS----LLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 933 -~~~-~i-----~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
... .+ .+.. ..................+.+++.+||+.||++|||++|+++|-+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 314 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCC
Confidence 000 00 0000 000000011111112456889999999999999999999999865
No 231
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.2e-37 Score=343.60 Aligned_cols=255 Identities=24% Similarity=0.315 Sum_probs=208.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.+.|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.... ..+
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~ 96 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT----KLW 96 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----EEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC----eEE
Confidence 356889999999999999999854 68999999997543 345678999999999999999999999998765 457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 97 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 97 IIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EEEECCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 999999999999999753 4899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
... ......||..|+|||++.+..++.++|||||||++|||++|+.||...... ..... +.+......
T Consensus 172 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~-----~~~~~~~~~ 239 (303)
T 3a7i_A 172 TQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-----KVLFL-----IPKNNPPTL 239 (303)
T ss_dssp TBC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHH-----HHHSCCCCC
T ss_pred ccc--ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-----HHHHH-----hhcCCCCCC
Confidence 321 224457899999999999999999999999999999999999999753221 11110 000000000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
+..++..+.+++.+||+.+|++|||+.|+++|..-.+.
T Consensus 240 ----------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 277 (303)
T 3a7i_A 240 ----------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 277 (303)
T ss_dssp ----------CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred ----------ccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence 11234568899999999999999999999998765443
No 232
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=8.9e-38 Score=339.53 Aligned_cols=250 Identities=26% Similarity=0.353 Sum_probs=196.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ .
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 85 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT----D 85 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----E
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC----e
Confidence 467999999999999999999865 79999999987542 234567889999999999999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 86 FFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred EEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 579999999999999997654 4899999999999999999999 889999999999999999999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
..... .....||+.|+|||++.+..+ +.++||||+|+++|||++|+.||..... ...... +..
T Consensus 162 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~--------~~~ 225 (276)
T 2h6d_A 162 SDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-----PTLFKK--------IRG 225 (276)
T ss_dssp CC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH--------HHH
T ss_pred CCCcc---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-----HHHHHH--------hhc
Confidence 54322 234568899999999887765 6899999999999999999999975321 111111 101
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..... +..++..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 226 ~~~~~--------~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~ 264 (276)
T 2h6d_A 226 GVFYI--------PEYLNRSVATLLMHMLQVDPLKRATIKDIREHEW 264 (276)
T ss_dssp CCCCC--------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred CcccC--------chhcCHHHHHHHHHHccCChhhCCCHHHHHhChh
Confidence 11000 1123456889999999999999999999999854
No 233
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.6e-38 Score=357.30 Aligned_cols=269 Identities=22% Similarity=0.262 Sum_probs=198.9
Q ss_pred HhhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchh----
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK---- 777 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---- 777 (1002)
...++|+..+.||+|+||+||+|+. .+|+.||||++...... ..+|+++++.++||||+++++++......
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 4567899999999999999999985 57999999998754322 24699999999999999999998654311
Q ss_pred ------------------------------hHHHHHhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHH
Q 037042 778 ------------------------------ALFKALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLY 824 (1002)
Q Consensus 778 ------------------------------~~~~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH 824 (1002)
..+.++||||++ |+|.+.+.. .+..+++..+..++.||++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 112468999998 487777653 3346899999999999999999999
Q ss_pred cCCCCCcEEccCCCCCeeeC-CCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHH
Q 037042 825 FGYSTPVIHCDLKPSNVLLG-DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVML 902 (1002)
Q Consensus 825 ~~~~~~iiHrDlkp~NILl~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l 902 (1002)
+.+|+||||||+||+++ .++.+||+|||+|+....... .....||..|+|||++.+. .++.++||||+||++
T Consensus 159 ---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 159 ---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp ---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred ---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 99999999999999997 689999999999987654432 2345689999999987764 489999999999999
Q ss_pred HHHHhCCCCCcccccccccHHHHHHHHHhh---hhhh-------cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCC
Q 037042 903 METFTGKKPTNEIFNEGMTLKHWVNDWLLI---SIMK-------IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESP 972 (1002)
Q Consensus 903 ~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~~~~-------i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P 972 (1002)
|||++|+.||......+ .+...+...... .+.. ..-+... ........+..++..+.+++.+||+++|
T Consensus 233 ~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (383)
T 3eb0_A 233 GELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLK-AKDWRKILPEGTPSLAIDLLEQILRYEP 310 (383)
T ss_dssp HHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCC-CCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred HHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCcccccccCCccC-cccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence 99999999997643221 122221111000 0000 0000000 1111222333456779999999999999
Q ss_pred CCCCCHHHHHHH
Q 037042 973 EKRINAKEIVTR 984 (1002)
Q Consensus 973 ~~Rpt~~evl~~ 984 (1002)
++|||+.|+++|
T Consensus 311 ~~R~t~~e~l~h 322 (383)
T 3eb0_A 311 DLRINPYEAMAH 322 (383)
T ss_dssp GGSCCHHHHHTS
T ss_pred hhCCCHHHHhcC
Confidence 999999999977
No 234
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-38 Score=357.32 Aligned_cols=255 Identities=22% Similarity=0.293 Sum_probs=202.0
Q ss_pred cCCCCCceeeccCcceEEEEEe----CCCcEEEEEEeeccc----chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCch
Q 037042 706 DGFSENNLIGRGGFGSVYKARI----QDGMEVAVKVFNQQC----GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 776 (1002)
++|+..+.||+|+||+||+|+. .+|+.||||++++.. ......+.+|+++++++ +||||+++++++...+
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 132 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET- 132 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT-
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc-
Confidence 5799999999999999999986 368999999986532 22345677899999999 6999999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccc
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGI 856 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 856 (1002)
..++||||+++|+|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 133 ---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 ---KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp ---EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred ---eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 4579999999999999997654 4899999999999999999999 88999999999999999999999999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccCC--CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGSE--GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
++.+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ....+.....
T Consensus 206 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~---- 279 (355)
T 1vzo_A 206 SKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRIL---- 279 (355)
T ss_dssp EEECCGGGGG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHHH----
T ss_pred CeecccCCCC-cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHHh----
Confidence 9876433221 2234568999999999875 347899999999999999999999997543222 1222211110
Q ss_pred hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCC-----CHHHHHHHHH
Q 037042 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRI-----NAKEIVTRLL 986 (1002)
Q Consensus 935 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~evl~~L~ 986 (1002)
..... .+..++..+.+++.+||..||++|| ++.|+++|..
T Consensus 280 ----~~~~~--------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~ 324 (355)
T 1vzo_A 280 ----KSEPP--------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324 (355)
T ss_dssp ----HCCCC--------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred ----ccCCC--------CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcc
Confidence 00000 1122345688999999999999999 9999999865
No 235
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=340.50 Aligned_cols=254 Identities=24% Similarity=0.372 Sum_probs=199.4
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
++|.....||+|+||.||+|+. .+++.||||++........+.+.+|+.++++++||||+++++++...+ ..++|
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv 97 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG----FIKIF 97 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETT----EEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC----cEEEE
Confidence 3466667999999999999985 468899999998766666788999999999999999999999998766 45799
Q ss_pred hccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-CCcEEEeccccccccc
Q 037042 785 LEYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-NMVAHLSDFGITKLLT 861 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~~ 861 (1002)
|||+++++|.+++..... ..++..+..++.||+.||+||| +.+|+||||||+||+++. ++.+||+|||+++...
T Consensus 98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~ 174 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174 (295)
T ss_dssp EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence 999999999999986533 4568888999999999999999 899999999999999987 8999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCC--cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhccc
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGR--VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVD 939 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 939 (1002)
.... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||........ ..... .... ..
T Consensus 175 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~----~~~~-~~ 244 (295)
T 2clq_A 175 GINP--CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA---AMFKV----GMFK-VH 244 (295)
T ss_dssp C-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH---HHHHH----HHHC-CC
T ss_pred CCCC--cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH---HHHhh----cccc-cc
Confidence 4321 223457899999999876643 78999999999999999999999975322111 00000 0000 00
Q ss_pred CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 940 GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+.. +..++..+.+++.+||+.+|++||++.|+++|-.
T Consensus 245 ~~~----------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~ 281 (295)
T 2clq_A 245 PEI----------PESMSAEAKAFILKCFEPDPDKRACANDLLVDEF 281 (295)
T ss_dssp CCC----------CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGG
T ss_pred ccc----------cccCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 111 1223467889999999999999999999998743
No 236
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.1e-37 Score=359.92 Aligned_cols=267 Identities=18% Similarity=0.220 Sum_probs=202.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhc------cCCCcceeeeEEecCchh
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSI------RHRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~ 777 (1002)
..+|++.+.||+|+||+||+|+.. +++.||||++... ......+.+|+++++.+ .|+||+++++++....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-- 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN-- 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--
Confidence 457999999999999999999855 6899999999754 33456677888888887 4679999999998766
Q ss_pred hHHHHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc--EEEecc
Q 037042 778 ALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV--AHLSDF 854 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~--~kl~Df 854 (1002)
..++||||+. ++|.+++..... .+++..+..++.||++||+||| +.+|+||||||+|||++.++. +||+||
T Consensus 173 --~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 173 --HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp --EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred --eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeec
Confidence 5689999996 599999877543 5899999999999999999999 889999999999999999887 999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI-- 932 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~-- 932 (1002)
|+++...... ....||+.|+|||++.+..|+.++|||||||++|||++|+.||...... ..+..++......
T Consensus 247 G~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~-~~l~~i~~~~~~p~~ 320 (429)
T 3kvw_A 247 GSSCYEHQRV-----YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEG-DQLACMIELLGMPSQ 320 (429)
T ss_dssp TTCEETTCCC-----CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCH
T ss_pred ccceecCCcc-----cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCCCH
Confidence 9997654322 3457899999999999999999999999999999999999999764322 1122221110000
Q ss_pred h-------hhhcccCcc------------------------------CChhhhHHHhHHHHHHHHHHHHhHccccCCCCC
Q 037042 933 S-------IMKIVDGSL------------------------------LSREDIQFVAKEQCMSFVFNMAMECTVESPEKR 975 (1002)
Q Consensus 933 ~-------~~~i~~~~~------------------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R 975 (1002)
. ....++... ..........+......+.+++.+||++||++|
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~R 400 (429)
T 3kvw_A 321 KLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVR 400 (429)
T ss_dssp HHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTS
T ss_pred HHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhC
Confidence 0 000000000 000000111111224678999999999999999
Q ss_pred CCHHHHHHHHH
Q 037042 976 INAKEIVTRLL 986 (1002)
Q Consensus 976 pt~~evl~~L~ 986 (1002)
||++|+++|-+
T Consensus 401 pta~e~L~Hpw 411 (429)
T 3kvw_A 401 MTPGQALRHPW 411 (429)
T ss_dssp CCHHHHHTSTT
T ss_pred CCHHHHhCChh
Confidence 99999999855
No 237
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=9.1e-38 Score=358.55 Aligned_cols=271 Identities=20% Similarity=0.203 Sum_probs=201.8
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhcc--------CCCcceeeeEEecCc
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR--------HRNIIKIISCCSIGD 775 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~~~~ 775 (1002)
.++|++.++||+|+||+||+|+. .+++.||||++... ....+.+.+|++++++++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 36799999999999999999985 46899999999754 334577889999999996 788999999987432
Q ss_pred hhhHHHHHhhccCCCCChhHhhhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCC-CcEEccCCCCCeeeCCCC------
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSS-NYILDIFQRLNIMIDVASALEYLYFGYST-PVIHCDLKPSNVLLGDNM------ 847 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiHrDlkp~NILl~~~~------ 847 (1002)
......++||||+ ++++.+++... ...+++..++.++.||++||+||| ++ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhh
Confidence 2222567999999 55666655543 346899999999999999999999 77 999999999999999775
Q ss_pred -------------------------------------------cEEEecccccccccCCCceeeeccCCCCccccccccc
Q 037042 848 -------------------------------------------VAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYG 884 (1002)
Q Consensus 848 -------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~ 884 (1002)
.+||+|||+++..... .....||..|+|||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhh
Confidence 8999999999876532 2345789999999999
Q ss_pred CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccH-----HHHHHHHHh--------hhh-hhcccCc--cC-----
Q 037042 885 SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTL-----KHWVNDWLL--------ISI-MKIVDGS--LL----- 943 (1002)
Q Consensus 885 ~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~-----~~~~~~~~~--------~~~-~~i~~~~--~~----- 943 (1002)
.+..++.++|||||||++|||++|+.||.......... ......... ... ....... ..
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 98899999999999999999999999997644322111 111000000 000 0000000 00
Q ss_pred Chhh------hHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 944 SRED------IQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 944 ~~~~------~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.... .....+..+...+.+++.+||+.||++|||++|+++|-
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 393 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP 393 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSG
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCc
Confidence 0000 00011345677899999999999999999999999874
No 238
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.2e-37 Score=362.52 Aligned_cols=263 Identities=17% Similarity=0.196 Sum_probs=206.1
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhccC-CCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRH-RNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|++.++||+|+||.||+|+. .+++.||||++..... ...+..|+++++.++| ++|..+..++...+ ..+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~----~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGD----YNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETT----EEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCC----EEE
Confidence 46799999999999999999985 5799999999875432 2457889999999987 45555555555544 457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee---CCCCcEEEeccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL---GDNMVAHLSDFGITKL 859 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DfGla~~ 859 (1002)
+||||+ +++|.+++......+++..++.|+.||+.||+||| +++|+||||||+|||+ +.++.+||+|||+++.
T Consensus 80 lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 999999 99999999876667999999999999999999999 8999999999999999 5889999999999987
Q ss_pred ccCCCcee-----eeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh
Q 037042 860 LTREDQFV-----TQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 860 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
+....... ......||..|+|||++.+..++.++|||||||++|||++|+.||........ ...+........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~~i~~~~~ 233 (483)
T 3sv0_A 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQKYEKISEKKV 233 (483)
T ss_dssp CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HHHHHHHHHHHH
T ss_pred ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HHHHHHHhhccc
Confidence 76543211 12356799999999999999999999999999999999999999987433211 111111111100
Q ss_pred hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 935 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
... .......++.++.+++.+||..+|++||++.+|++.|+++-.
T Consensus 234 ~~~-----------~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 234 ATS-----------IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HSC-----------HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred ccc-----------HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 000 000112345679999999999999999999999999998853
No 239
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=344.66 Aligned_cols=254 Identities=24% Similarity=0.298 Sum_probs=201.6
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
..++|+..+.||+|+||.||+|+.. +|+.||||++.... ..+.+.+|++++++++||||+++++++...+ ..+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~ 100 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT----DLW 100 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT----EEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC----EEE
Confidence 3567999999999999999999865 58999999997643 3467889999999999999999999998765 457
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 101 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp EEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred EEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 999999999999999765567999999999999999999999 89999999999999999999999999999987654
Q ss_pred CCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCcc
Q 037042 863 EDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSL 942 (1002)
Q Consensus 863 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 942 (1002)
... ......||..|+|||++.+..++.++|||||||++|||++|+.||....... .. .. .........
T Consensus 178 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~-~~-----~~~~~~~~~ 245 (314)
T 3com_A 178 TMA--KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR----AI-FM-----IPTNPPPTF 245 (314)
T ss_dssp TBS--CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH----HH-HH-----HHHSCCCCC
T ss_pred hcc--ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH----HH-HH-----HhcCCCccc
Confidence 322 2234578999999999999899999999999999999999999997532211 00 00 000000000
Q ss_pred CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 943 LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 943 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
. .+...+..+.+++.+||..+|.+|||+.|+++|-+
T Consensus 246 ~--------~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~ 281 (314)
T 3com_A 246 R--------KPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPF 281 (314)
T ss_dssp S--------SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHH
T ss_pred C--------CcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHH
Confidence 0 01223467889999999999999999999998754
No 240
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8.1e-38 Score=348.53 Aligned_cols=257 Identities=19% Similarity=0.243 Sum_probs=201.8
Q ss_pred HhhcCCCCC-ceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchh
Q 037042 703 QATDGFSEN-NLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFK 777 (1002)
Q Consensus 703 ~~~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 777 (1002)
...++|.+. +.||+|+||+||+|+.. +++.||||++.... ......+.+|+.+++++. ||||+++++++...+
T Consensus 25 ~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~-- 102 (327)
T 3lm5_A 25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS-- 102 (327)
T ss_dssp HHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--
T ss_pred hhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC--
Confidence 344567776 88999999999999865 69999999987543 234578899999999994 699999999998766
Q ss_pred hHHHHHhhccCCCCChhHhhhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCcEEEec
Q 037042 778 ALFKALALEYMPHGSLEKYLYSS-NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMVAHLSD 853 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~D 853 (1002)
..++||||+++|+|.+++... ...+++..++.++.|++.||+||| +.+|+||||||+||+++. ++.+||+|
T Consensus 103 --~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~D 177 (327)
T 3lm5_A 103 --EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVD 177 (327)
T ss_dssp --EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred --eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEee
Confidence 467999999999999998654 346899999999999999999999 899999999999999987 78999999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
||+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...
T Consensus 178 fg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-----~~~----- 244 (327)
T 3lm5_A 178 FGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET-----YLN----- 244 (327)
T ss_dssp GGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----HHH-----
T ss_pred CccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-----HHH-----
Confidence 999987654332 2345789999999999999999999999999999999999999976322111 000
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+..... ..... ....++..+.+++.+||+.+|++|||++|+++|-+
T Consensus 245 i~~~~~-~~~~~------~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~ 290 (327)
T 3lm5_A 245 ISQVNV-DYSEE------TFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSW 290 (327)
T ss_dssp HHHTCC-CCCTT------TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGG
T ss_pred HHhccc-ccCch------hhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHh
Confidence 011000 00000 01224567889999999999999999999999865
No 241
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.7e-37 Score=352.17 Aligned_cols=271 Identities=19% Similarity=0.170 Sum_probs=194.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh--hH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK--AL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~ 779 (1002)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+.. ..
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 467999999999999999999854 68999999997542 33456788999999999999999999998765411 11
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||+++ +|.+++.. .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 34799999975 78888753 3789999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH-------Hh-
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW-------LL- 931 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~-------~~- 931 (1002)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ +...+... ..
T Consensus 177 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 177 AGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHC-CCCCCHHHHTT
T ss_pred ccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHH
Confidence 65332 22345789999999999998999999999999999999999999976422110 00000000 00
Q ss_pred --hhhhhccc--CccCChh----------hhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 932 --ISIMKIVD--GSLLSRE----------DIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 932 --~~~~~i~~--~~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
........ +...... ..........+..+.+++.+||..||++|||++|+++|-+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 321 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 321 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcc
Confidence 00000000 0000000 0000112334678999999999999999999999999864
No 242
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.1e-38 Score=343.70 Aligned_cols=260 Identities=20% Similarity=0.273 Sum_probs=203.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...... ..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~--~~ 82 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNT--TL 82 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGT--EE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCc--eE
Confidence 457999999999999999999865 68999999997542 33457789999999999999999999987543221 45
Q ss_pred HHhhccCCCCChhHhhhccC---CcCCHHHHHHHHHHHHHHHHHHHcCCCCC-----cEEccCCCCCeeeCCCCcEEEec
Q 037042 782 ALALEYMPHGSLEKYLYSSN---YILDIFQRLNIMIDVASALEYLYFGYSTP-----VIHCDLKPSNVLLGDNMVAHLSD 853 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-----iiHrDlkp~NILl~~~~~~kl~D 853 (1002)
++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~d 159 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGD 159 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECC
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEec
Confidence 79999999999999997642 24899999999999999999999 666 99999999999999999999999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
||+++........ .....||..|+|||++.+..++.++||||||+++|||++|+.||...... ......
T Consensus 160 fg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~i---- 228 (279)
T 2w5a_A 160 FGLARILNHDTSF--AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-----ELAGKI---- 228 (279)
T ss_dssp CCHHHHC---CHH--HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHH----
T ss_pred Cchheeecccccc--ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH-----HHHHHH----
Confidence 9999876543221 12345889999999998888999999999999999999999999764221 111111
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhccc
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDL 991 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~ 991 (1002)
..+.... .+..++..+.+++.+||+.+|++||++.|++++++.-...
T Consensus 229 ----~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 229 ----REGKFRR-------IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp ----HHTCCCC-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred ----hhccccc-------CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence 1111000 0112346789999999999999999999999988754443
No 243
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5.6e-38 Score=354.58 Aligned_cols=269 Identities=21% Similarity=0.226 Sum_probs=185.3
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh--hH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK--AL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~ 779 (1002)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++...... ..
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46899999999999999999985 478999999986532 33456788999999999999999999998654211 11
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++|+||+ +++|.+++... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 347999999 78999998763 4899999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--h-hh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--S-IM 935 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~-~~ 935 (1002)
.... .....||..|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+.......... . +.
T Consensus 182 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 182 TADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLK 255 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHT
T ss_pred cccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHH
Confidence 5432 234578999999998876 67899999999999999999999999764221 1111111110000 0 00
Q ss_pred hcc--------cCccC-ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 936 KIV--------DGSLL-SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 936 ~i~--------~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+. ..... ....... .....+..+.+++.+||..||++|||+.|+++|-.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~ 314 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFAN-VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHH-HTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred HhhhHHHHHHHhccCCCCCCCHHH-HCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChh
Confidence 000 00000 0000000 01123467899999999999999999999999844
No 244
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4e-37 Score=339.61 Aligned_cols=256 Identities=20% Similarity=0.267 Sum_probs=201.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc----chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC----GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~-- 81 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQ-- 81 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCC--
Confidence 468999999999999999999864 68999999997542 23457789999999999999999999998543311
Q ss_pred HHHHhhccCCCCChhHhhhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSS-NYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
..++||||++++ +.+++... ...+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||++.
T Consensus 82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccc
Confidence 347999999886 77766553 346899999999999999999999 8999999999999999999999999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCC--cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhh
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGR--VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMK 936 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (1002)
...............||..|+|||+..+.. ++.++||||+||++|||++|+.||.... ........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~i------- 225 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKLFENI------- 225 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHH-------
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHH-------
Confidence 765433333334567899999999887643 4789999999999999999999997532 11111111
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHh
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLK 987 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~ 987 (1002)
....... +..++..+.+++.+||..||++|||+.|+++|-+-
T Consensus 226 -~~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~ 267 (305)
T 2wtk_C 226 -GKGSYAI--------PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF 267 (305)
T ss_dssp -HHCCCCC--------CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHH
T ss_pred -hcCCCCC--------CCccCHHHHHHHHHHccCChhhCCCHHHHhcCccc
Confidence 1111100 11234668899999999999999999999998553
No 245
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.6e-37 Score=351.56 Aligned_cols=275 Identities=20% Similarity=0.205 Sum_probs=204.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh-hHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK-ALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~~ 781 (1002)
..+|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...... ....
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 467999999999999999999854 68899999997543 33457788999999999999999999998765311 1134
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||++ |+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 79999997 5999998764 3899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCcee-eeccCCCCcccccccccC-CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh---hhh
Q 037042 862 REDQFV-TQTQTPATIGYMALEYGS-EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS---IMK 936 (1002)
Q Consensus 862 ~~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~~ 936 (1002)
...... ......||+.|+|||++. ...++.++||||+||++|||++|+.||....... .+........... ...
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~ 258 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQEDLNC 258 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHHHHHT
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHH
Confidence 432211 123457999999999754 4558999999999999999999999997643221 1111111100000 000
Q ss_pred ccc--------CccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 937 IVD--------GSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 937 i~~--------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+.+ ................++..+.+++.+||++||++|||+.|+++|-+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 316 (364)
T 3qyz_A 259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316 (364)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred hhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 000 00000000000011224567899999999999999999999999854
No 246
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.4e-37 Score=340.19 Aligned_cols=254 Identities=22% Similarity=0.310 Sum_probs=203.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---------chhHHHHHHHHHHHHhcc-CCCcceeeeEEec
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---------GRAFKSFDVECEVMKSIR-HRNIIKIISCCSI 773 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~ 773 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 468999999999999999999865 68999999997542 123466788999999995 9999999999987
Q ss_pred CchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEec
Q 037042 774 GDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSD 853 (1002)
Q Consensus 774 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 853 (1002)
.. ..++||||+++++|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 96 ~~----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 96 NT----FFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp SS----EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECC
T ss_pred CC----eEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEec
Confidence 66 5679999999999999997654 4899999999999999999999 89999999999999999999999999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccC------CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGS------EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN 927 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~ 927 (1002)
||++........ .....||+.|+|||++. ...++.++|||||||++|||++|+.||...... ....
T Consensus 168 fg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~ 239 (298)
T 1phk_A 168 FGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM-----LMLR 239 (298)
T ss_dssp CTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH
T ss_pred ccchhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH-----HHHH
Confidence 999987654432 23456899999999864 456899999999999999999999999653211 1111
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
. +.......... .....+..+.+++.+||+.+|++|||+.|+++|-.
T Consensus 240 ~--------~~~~~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~ 286 (298)
T 1phk_A 240 M--------IMSGNYQFGSP----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 286 (298)
T ss_dssp H--------HHHTCCCCCTT----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGG
T ss_pred H--------HhcCCcccCcc----cccccCHHHHHHHHHHccCCcccCCCHHHHHhChH
Confidence 1 11111000000 01234567899999999999999999999998744
No 247
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.6e-37 Score=338.02 Aligned_cols=246 Identities=20% Similarity=0.277 Sum_probs=198.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ......+.+|+..+.++ +||||+++++++...+ .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~----~ 85 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD----H 85 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT----E
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC----e
Confidence 457999999999999999999865 79999999987542 33457788899999999 9999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhccC---CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC-----------
Q 037042 781 KALALEYMPHGSLEKYLYSSN---YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN----------- 846 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~----------- 846 (1002)
.++||||+++|+|.+++.... ..+++..++.++.||++||+||| +++|+||||||+||+++.+
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~ 162 (289)
T 1x8b_A 86 MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGD 162 (289)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-------------
T ss_pred EEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccc
Confidence 679999999999999997642 35899999999999999999999 8999999999999999844
Q ss_pred --------CcEEEecccccccccCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCccccc
Q 037042 847 --------MVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFN 917 (1002)
Q Consensus 847 --------~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~ 917 (1002)
..+||+|||.+....... ...||+.|+|||++.+. .++.++|||||||++|||++|.+|+.....
T Consensus 163 ~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~ 236 (289)
T 1x8b_A 163 EDDWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ 236 (289)
T ss_dssp -------CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH
T ss_pred cccccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH
Confidence 479999999998765432 24589999999998766 567899999999999999999987644210
Q ss_pred ccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 918 EGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.. .+....... .+..++..+.+++.+||+.||++|||+.|+++|-+
T Consensus 237 ----~~------------~~~~~~~~~-------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~ 282 (289)
T 1x8b_A 237 ----WH------------EIRQGRLPR-------IPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSV 282 (289)
T ss_dssp ----HH------------HHHTTCCCC-------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTT
T ss_pred ----HH------------HHHcCCCCC-------CCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChH
Confidence 00 111111100 01123467899999999999999999999998743
No 248
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=5.7e-38 Score=343.75 Aligned_cols=253 Identities=21% Similarity=0.254 Sum_probs=185.9
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccc--hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCG--RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||+||+|+. .+|+.||||++..... .....+..+...++.++||||+++++++...+ ..
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~----~~ 81 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG----DV 81 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----SE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC----CE
Confidence 46799999999999999999986 4799999999975432 22333444555678889999999999998766 56
Q ss_pred HHhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCC-CcEEccCCCCCeeeCCCCcEEEeccccc
Q 037042 782 ALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYST-PVIHCDLKPSNVLLGDNMVAHLSDFGIT 857 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla 857 (1002)
++||||+++ +|.+++.. ....+++..+..++.|++.|++||| ++ +|+||||||+||+++.++.+||+|||++
T Consensus 82 ~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T 3fme_A 82 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157 (290)
T ss_dssp EEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC---
T ss_pred EEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCc
Confidence 799999974 88877754 3446999999999999999999999 76 9999999999999999999999999999
Q ss_pred ccccCCCceeeeccCCCCccccccccc----CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYG----SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS 933 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 933 (1002)
+....... .....||+.|+|||++ .+..++.++||||+||++|||++|+.||............
T Consensus 158 ~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--------- 225 (290)
T 3fme_A 158 GYLVDDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ--------- 225 (290)
T ss_dssp ---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH---------
T ss_pred cccccccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHH---------
Confidence 87654322 2334689999999985 5667899999999999999999999999753222111111
Q ss_pred hhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 934 IMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 934 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.......... ....+..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 226 ---~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~ 269 (290)
T 3fme_A 226 ---VVEEPSPQLP------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269 (290)
T ss_dssp ---HHHSCCCCCC------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred ---HhccCCCCcc------cccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcc
Confidence 1111000000 1123456899999999999999999999998744
No 249
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.4e-38 Score=347.82 Aligned_cols=264 Identities=22% Similarity=0.284 Sum_probs=185.6
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
..++|+..+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~ 88 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD----EL 88 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSS----CE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC----Cc
Confidence 356899999999999999999985 468999999986542 334567889999999999999999999998776 45
Q ss_pred HHhhccCCCCChhHhhhc-------cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecc
Q 037042 782 ALALEYMPHGSLEKYLYS-------SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~-------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
++||||+++|+|.+++.. ....+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~df 165 (303)
T 2vwi_A 89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADF 165 (303)
T ss_dssp EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCC
T ss_pred EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEec
Confidence 799999999999999874 2345899999999999999999999 899999999999999999999999999
Q ss_pred cccccccCCCce---eeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 855 GITKLLTREDQF---VTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 855 Gla~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
|++......... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .... .
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~-~ 240 (303)
T 2vwi_A 166 GVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV----LMLT-L 240 (303)
T ss_dssp HHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH----HHHH-H
T ss_pred cchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH----HHHH-h
Confidence 999876543211 11234568999999998765 5689999999999999999999999976432211 0000 0
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
......... ..........++..+.+++.+||+.||++|||+.|+++|-
T Consensus 241 ~~~~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 289 (303)
T 2vwi_A 241 QNDPPSLET------GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHK 289 (303)
T ss_dssp TSSCCCTTC-----------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTST
T ss_pred ccCCCcccc------ccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence 000000000 0000000112345688999999999999999999999873
No 250
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.8e-37 Score=349.36 Aligned_cols=265 Identities=18% Similarity=0.255 Sum_probs=204.3
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccch-----------------hHHHHHHHHHHHHhccCCCccee
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGR-----------------AFKSFDVECEVMKSIRHRNIIKI 767 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~E~~~l~~l~h~niv~~ 767 (1002)
.++|++.+.||+|+||.||+|+. +|+.||||++...... ..+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999999999998 8999999998743211 11789999999999999999999
Q ss_pred eeEEecCchhhHHHHHhhccCCCCChhHh------hhcc-CCcCCHHHHHHHHHHHHHHHHHHHcCCC-CCcEEccCCCC
Q 037042 768 ISCCSIGDFKALFKALALEYMPHGSLEKY------LYSS-NYILDIFQRLNIMIDVASALEYLYFGYS-TPVIHCDLKPS 839 (1002)
Q Consensus 768 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~iiHrDlkp~ 839 (1002)
++++...+ ..++||||+++|+|.++ +... ...+++..+..++.||+.||+||| + .+|+||||||+
T Consensus 109 ~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~ 181 (348)
T 2pml_X 109 EGIITNYD----EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPS 181 (348)
T ss_dssp SEEEESSS----EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGG
T ss_pred EEEEeeCC----eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChH
Confidence 99998776 56799999999999998 6543 346899999999999999999999 7 99999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCC-CcCc-ccchHHHHHHHHHHHhCCCCCccccc
Q 037042 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG-RVST-NGDVYNFGVMLMETFTGKKPTNEIFN 917 (1002)
Q Consensus 840 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwSlGv~l~elltg~~P~~~~~~ 917 (1002)
||+++.++.+||+|||++...... ......||..|+|||+..+. .++. ++|||||||++|||++|+.||.....
T Consensus 182 Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 257 (348)
T 2pml_X 182 NILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS 257 (348)
T ss_dssp GEEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC
T ss_pred hEEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 999999999999999999876543 22456789999999998877 6666 99999999999999999999976433
Q ss_pred ccccHHHHHHHHHhhhhhhcccCc-cCC--hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 918 EGMTLKHWVNDWLLISIMKIVDGS-LLS--REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~i~~~~-~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
.. +..............+.. ... ...........++..+.+++.+||+.+|++|||+.|+++|-
T Consensus 258 ~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp 324 (348)
T 2pml_X 258 LV----ELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE 324 (348)
T ss_dssp SH----HHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred HH----HHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 11 111111111000000000 000 00000001123456789999999999999999999999874
No 251
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=8.1e-38 Score=350.85 Aligned_cols=254 Identities=22% Similarity=0.287 Sum_probs=198.7
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc-chhHHHHHHHHHH-HHhccCCCcceeeeEEecCchhhHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC-GRAFKSFDVECEV-MKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
..++|+..+.||+|+||+||+|+. .+|+.||||++.... ......+..|+.+ ++.++||||+++++++...+ .
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~----~ 124 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG----D 124 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS----C
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC----c
Confidence 346788999999999999999986 479999999997543 3334555566665 77789999999999998766 5
Q ss_pred HHHhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCC-CcEEccCCCCCeeeCCCCcEEEecccc
Q 037042 781 KALALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYST-PVIHCDLKPSNVLLGDNMVAHLSDFGI 856 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGl 856 (1002)
.++||||+++ +|.+++.. ....+++..+..++.||++||+||| ++ +|+||||||+||+++.++.+||+|||+
T Consensus 125 ~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 200 (340)
T 3an0_A 125 VWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGI 200 (340)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSH
T ss_pred EEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCC
Confidence 6799999975 99888864 3446999999999999999999999 65 999999999999999999999999999
Q ss_pred cccccCCCceeeeccCCCCcccccccccC----CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYGS----EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
++...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||.........+.
T Consensus 201 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~--------- 268 (340)
T 3an0_A 201 SGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK--------- 268 (340)
T ss_dssp HHHHSCHH---HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH---------
T ss_pred ceeccccc---ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHH---------
Confidence 98765322 123357899999999864 34789999999999999999999999975322111111
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
++........ ....++..+.+++.+||..+|++|||+.|+++|-+
T Consensus 269 ---~~~~~~~~~~------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 313 (340)
T 3an0_A 269 ---QVVEEPSPQL------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313 (340)
T ss_dssp ---HHHHSCCCCC------CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred ---HHhcCCCCCC------CcccCCHHHHHHHHHHccCCcccCcCHHHHhcCcC
Confidence 1111100000 01123567899999999999999999999999754
No 252
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.9e-37 Score=344.97 Aligned_cols=252 Identities=24% Similarity=0.308 Sum_probs=197.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--------chhHHHHHHHHHHHHhccCCCcceeeeEEecCc
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--------GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGD 775 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 775 (1002)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457999999999999999999865 68999999986432 122345788999999999999999999987654
Q ss_pred hhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc---EEEe
Q 037042 776 FKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV---AHLS 852 (1002)
Q Consensus 776 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~---~kl~ 852 (1002)
.++||||+++|+|.+++...+ .+++..+..++.||++||+||| +++|+||||||+||+++.++. +||+
T Consensus 89 -----~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 89 -----YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp -----EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred -----eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEc
Confidence 479999999999999987654 5899999999999999999999 899999999999999987654 9999
Q ss_pred cccccccccCCCceeeeccCCCCccccccccc---CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHH
Q 037042 853 DFGITKLLTREDQFVTQTQTPATIGYMALEYG---SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDW 929 (1002)
Q Consensus 853 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~ 929 (1002)
|||+++....... .....||+.|+|||++ ....++.++|||||||++|||++|+.||........ +...+.
T Consensus 160 Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~-- 233 (322)
T 2ycf_A 160 DFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQIT-- 233 (322)
T ss_dssp CCTTCEECCCCHH---HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-HHHHHH--
T ss_pred cCccceecccccc---cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-HHHHHH--
Confidence 9999987654321 1234589999999986 356789999999999999999999999976433221 111111
Q ss_pred HhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 930 LLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 930 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
........ .....++..+.+++.+||..||++|||+.|+++|
T Consensus 234 ---------~~~~~~~~----~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 234 ---------SGKYNFIP----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp ---------HTCCCCCH----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---------hCccccCc----hhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 01100000 0112345678999999999999999999999975
No 253
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.7e-36 Score=343.16 Aligned_cols=349 Identities=19% Similarity=0.186 Sum_probs=194.9
Q ss_pred cCCCCCCCCCc-ccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecc
Q 037042 32 KNWNSSISFCN-WTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGD 110 (1002)
Q Consensus 32 ~~w~~~~~~c~-w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 110 (1002)
++|.++.+||. |.+..|.....++ ............-..+++|+.|++++|.++...+..+.++++|++|+|++
T Consensus 4 ~~~~~~~~C~~~~~~~~c~~~~~~i-----~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~ 78 (390)
T 3o6n_A 4 KPRQPEYKCIDSNLQYDCVFYDVHI-----DMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLND 78 (390)
T ss_dssp ---CCEECBCC------EEEESCEE-----CSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTT
T ss_pred CCCCCccceehhhhhhccceeeeee-----ecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCC
Confidence 47988888875 5555554322122 22222212222233467888888888888743333467788888888888
Q ss_pred cccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccc
Q 037042 111 NQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAY 190 (1002)
Q Consensus 111 N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 190 (1002)
|++. .+|...+..+++|++|+|++|.+++..|..|+++++|++|+|++|+++...+..|.++++|++|+|++|++++
T Consensus 79 n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~-- 155 (390)
T 3o6n_A 79 LQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER-- 155 (390)
T ss_dssp SCCC-EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB--
T ss_pred Cccc-ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCc--
Confidence 8877 4555555778888888888888887777777888888888888888874444446777888888888887764
Q ss_pred cchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccC
Q 037042 191 DHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVR 270 (1002)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 270 (1002)
..|..++.+++|++|++++|++++. .+..+++|+.|++++|.+++. ..
T Consensus 156 -----------------------~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~------~~ 203 (390)
T 3o6n_A 156 -----------------------IEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL------AI 203 (390)
T ss_dssp -----------------------CCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE------EC
T ss_pred -----------------------cChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc------CC
Confidence 2345567777777777777777754 234455666666666655421 12
Q ss_pred CCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCC
Q 037042 271 LPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKY 350 (1002)
Q Consensus 271 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~ 350 (1002)
.++|++|++++|++... |..+ .++|++|+|++|++++. ..+..+++|++|+|++|+++.+
T Consensus 204 ~~~L~~L~l~~n~l~~~-~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~--------------- 263 (390)
T 3o6n_A 204 PIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKI--------------- 263 (390)
T ss_dssp CSSCSEEECCSSCCCEE-ECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEE---------------
T ss_pred CCcceEEECCCCeeeec-cccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCc---------------
Confidence 23455555555555432 2211 24455555555554432 2344444444444444444333
Q ss_pred CcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEc
Q 037042 351 LEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYF 430 (1002)
Q Consensus 351 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 430 (1002)
.|..|..+++|++|+|++|++++ +|..+..+++|++|+|
T Consensus 264 ----------------------------------------~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L 302 (390)
T 3o6n_A 264 ----------------------------------------MYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 302 (390)
T ss_dssp ----------------------------------------ESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEEC
T ss_pred ----------------------------------------ChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEEC
Confidence 23344444455555555555543 2333444555555555
Q ss_pred cCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccc
Q 037042 431 PDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELIS 485 (1002)
Q Consensus 431 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 485 (1002)
++|+++ .+|..+..+++|+.|+|++|+|+.. + +..+++|+.|++++|.+..
T Consensus 303 ~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 303 SHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp CSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 555555 3444444555555555555555532 1 4445555666666665543
No 254
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.9e-37 Score=350.26 Aligned_cols=269 Identities=19% Similarity=0.197 Sum_probs=198.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH--
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL-- 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~-- 779 (1002)
.++|...+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+....
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 467999999999999999999854 69999999997542 3345778899999999999999999999976652111
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||++ ++|.+++.. .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 1279999997 588888743 3899999999999999999999 88999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--hhhh
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--SIMK 936 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~~~ 936 (1002)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .+.......... ....
T Consensus 194 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 194 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHT
T ss_pred cccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCcHHHHH
Confidence 5432 234578999999998877 678999999999999999999999997642211 111111100000 0000
Q ss_pred cccC---------ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 937 IVDG---------SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 937 i~~~---------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... ...............++..+.+++.+||+.||++|||+.|+++|-+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 326 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcc
Confidence 0000 0000000000011234577999999999999999999999999844
No 255
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.5e-38 Score=348.18 Aligned_cols=261 Identities=22% Similarity=0.279 Sum_probs=197.7
Q ss_pred HHHhhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchh-
Q 037042 701 LCQATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFK- 777 (1002)
Q Consensus 701 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~- 777 (1002)
+....++|+..+.||+|+||.||+|+. .+|+.||||++.... .....+.+|+.+++++ +||||+++++++......
T Consensus 19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 334567899999999999999999986 478999999987543 2346788999999999 799999999998763211
Q ss_pred -hHHHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccc
Q 037042 778 -ALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855 (1002)
Q Consensus 778 -~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 855 (1002)
....++||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg 174 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFG 174 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCT
T ss_pred ccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCc
Confidence 114579999999999999998653 36889999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCCceeeeccCCCCcccccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 856 ITKLLTREDQFVTQTQTPATIGYMALEYGS-----EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 856 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
++........ ......||+.|+|||++. +..++.++|||||||++|||++|+.||........ ...
T Consensus 175 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~-- 245 (326)
T 2x7f_A 175 VSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-----LFL-- 245 (326)
T ss_dssp TTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----HHH--
T ss_pred CceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-----HHH--
Confidence 9987653221 123456899999999876 56689999999999999999999999965322110 000
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+.....+... ...++..+.+++.+||..+|++||++.|+++|-.
T Consensus 246 ---~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~ 289 (326)
T 2x7f_A 246 ---IPRNPAPRLK---------SKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPF 289 (326)
T ss_dssp ---HHHSCCCCCS---------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHH
T ss_pred ---hhcCccccCC---------ccccCHHHHHHHHHHhccChhhCCCHHHHhhChH
Confidence 0000000000 1123456889999999999999999999998743
No 256
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.9e-37 Score=355.62 Aligned_cols=268 Identities=21% Similarity=0.265 Sum_probs=197.6
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCch--hhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--KALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~~~ 782 (1002)
.+|+..+.||+|+||+||+|+.. +|+.||||++..... ...+|++++++++|||||++++++..... ...+.+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 35888999999999999999875 699999999875432 23469999999999999999998854321 122346
Q ss_pred HhhccCCCCChhHhhhc---cCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC-CcEEEecccccc
Q 037042 783 LALEYMPHGSLEKYLYS---SNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN-MVAHLSDFGITK 858 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGla~ 858 (1002)
+||||+++ ++.+.+.. .+..+++..++.++.||++||+||| +.+|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999986 66665542 3446899999999999999999999 8999999999999999955 678999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh---hhh
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL---ISI 934 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~---~~~ 934 (1002)
.+..... .....||+.|+|||++.+. .|+.++|||||||++|||++|+.||...... ..+..++..... +.+
T Consensus 206 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 206 QLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp ECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHH
T ss_pred hcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 7654332 2345789999999988664 7899999999999999999999999764221 122222221110 011
Q ss_pred hhcc-------cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 935 MKIV-------DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 935 ~~i~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+. -+... ........+...+..+.+++.+||.+||++|||+.|+++|-+
T Consensus 282 ~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~ 339 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIK-AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339 (420)
T ss_dssp HHHCSCCCCCCCCCCC-CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred HhhChhhhhhccCccC-CCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHh
Confidence 1110 00000 000111112234567899999999999999999999998743
No 257
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=4.3e-37 Score=338.35 Aligned_cols=269 Identities=23% Similarity=0.281 Sum_probs=201.9
Q ss_pred cCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++...+ ..+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~ 78 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN----KLY 78 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT----EEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC----ceE
Confidence 57889999999999999999865 68999999986542 223467889999999999999999999998766 457
Q ss_pred HhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 783 LALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
+||||++ |+|.+++.... ..+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 79 lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 154 (299)
T 2r3i_A 79 LVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154 (299)
T ss_dssp EEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred EEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhcc
Confidence 9999997 59999987654 35889999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCC-cCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhh------h
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGR-VSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLIS------I 934 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~------~ 934 (1002)
.... ......+|+.|+|||+..+.. ++.++|||||||++|||++|+.||....... ............. .
T Consensus 155 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 231 (299)
T 2r3i_A 155 VPVR--TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGV 231 (299)
T ss_dssp CCSB--CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTG
T ss_pred CCcc--ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCchhhhhHh
Confidence 4322 223456899999999987765 7999999999999999999999997643211 1111111110000 0
Q ss_pred hhcc--cCccCC--hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 935 MKIV--DGSLLS--REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 935 ~~i~--~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.... ...... ..... ......+..+.+++.+|++.||++|||+.|+++|-+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~ 286 (299)
T 2r3i_A 232 TSMPDYKPSFPKWARQDFS-KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286 (299)
T ss_dssp GGSTTCCTTSCCCCCCCHH-HHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred hcCcccchhhhcccchhhH-hhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChh
Confidence 0000 000000 00000 001124567889999999999999999999999754
No 258
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1e-37 Score=345.73 Aligned_cols=256 Identities=21% Similarity=0.320 Sum_probs=197.2
Q ss_pred HhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhcc--CCCcceeeeEEecCchhh
Q 037042 703 QATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIR--HRNIIKIISCCSIGDFKA 778 (1002)
Q Consensus 703 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~ 778 (1002)
...++|++.+.||+|+||.||+|+..+++.||||++.... ....+.+.+|++++++++ ||||+++++++...+
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--- 101 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--- 101 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS---
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCC---
Confidence 3456799999999999999999998889999999997542 345678899999999997 599999999998776
Q ss_pred HHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 779 LFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 779 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
..++||| +.+++|.+++...+ .+++..+..++.|+++||+||| +.+|+||||||+||+++ ++.+||+|||+++
T Consensus 102 -~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~ 174 (313)
T 3cek_A 102 -YIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIAN 174 (313)
T ss_dssp -EEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred -EEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEE-CCeEEEeeccccc
Confidence 5679999 56889999998755 5899999999999999999999 88999999999999996 4899999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCC-----------CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSE-----------GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN 927 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~ 927 (1002)
...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ . .
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~-~- 249 (313)
T 3cek_A 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---K-L- 249 (313)
T ss_dssp C--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---H-H-
T ss_pred cccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH---H-H-
Confidence 7654433222344578999999998765 4688999999999999999999999975422111 1 1
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+.++...... +...+..+.+++.+||+.+|++||++.|+++|-+
T Consensus 250 -------~~~~~~~~~~~~------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 295 (313)
T 3cek_A 250 -------HAIIDPNHEIEF------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295 (313)
T ss_dssp -------HHHHCTTSCCCC------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred -------HHHHhcccccCC------cccchHHHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence 111111110000 0112356889999999999999999999999865
No 259
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.9e-37 Score=352.75 Aligned_cols=274 Identities=20% Similarity=0.270 Sum_probs=199.7
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCch--hhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--KALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~~~l 783 (1002)
.+|+..+.||+|+||+||+|+...+..||+|++...... ..+|+++++.++||||+++++++..... ...+.++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 468999999999999999999877777999988654321 2369999999999999999999865431 1123569
Q ss_pred hhccCCCCChhHhhh--ccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC-CCCcEEEecccccccc
Q 037042 784 ALEYMPHGSLEKYLY--SSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG-DNMVAHLSDFGITKLL 860 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~-~~~~~kl~DfGla~~~ 860 (1002)
||||++++.+..... ..+..+++..++.++.||++||+||| +.+|+||||||+|||++ .++.+||+|||+|+..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 999998754433332 22346899999999999999999999 89999999999999998 7999999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh---hhhh
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI---SIMK 936 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~---~~~~ 936 (1002)
..... .....||+.|+|||++.+. .|+.++||||+||++|||++|+.||....... .+...+...... .+..
T Consensus 193 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 193 IAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHH
T ss_pred cCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHh
Confidence 54432 2345789999999987664 58999999999999999999999997643221 122222111000 0000
Q ss_pred c----ccCccC--ChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH--HHhhcc
Q 037042 937 I----VDGSLL--SREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR--LLKIND 990 (1002)
Q Consensus 937 i----~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~--L~~i~~ 990 (1002)
+ ...... .........+...+..+.+++.+||++||++|||+.|+++| +++++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 0 000000 01111111222355689999999999999999999999998 444443
No 260
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.4e-37 Score=373.08 Aligned_cols=257 Identities=25% Similarity=0.403 Sum_probs=205.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC----CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ----DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 779 (1002)
.++|+..+.||+|+||+||+|++. .+..||||++.... ....+.+.+|+.++++++||||+++++++..+.
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~---- 464 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP---- 464 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCc----
Confidence 457888999999999999999864 25679999987543 334577899999999999999999999985432
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.++||||+++|+|.+++...+..+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++.
T Consensus 465 -~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 465 -VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp -CEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred -eEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCee
Confidence 47999999999999999877667899999999999999999999 89999999999999999999999999999987
Q ss_pred ccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
....... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... +.... +.
T Consensus 541 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~~~~~--------i~ 606 (656)
T 2j0j_A 541 MEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGR--------IE 606 (656)
T ss_dssp CCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHH--------HH
T ss_pred cCCCcce-eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHH--------HH
Confidence 6543322 2234457789999999988899999999999999999997 99998764221 11111 11
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcc
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIND 990 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~ 990 (1002)
...... .+..++..+.+++.+||+.+|++|||+.|++++|+++.+
T Consensus 607 ~~~~~~-------~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 607 NGERLP-------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp HTCCCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCC-------CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 111000 112345678999999999999999999999999998753
No 261
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.7e-36 Score=363.04 Aligned_cols=347 Identities=19% Similarity=0.181 Sum_probs=251.2
Q ss_pred cCCCCCCCCCc----ccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEE
Q 037042 32 KNWNSSISFCN----WTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLS 107 (1002)
Q Consensus 32 ~~w~~~~~~c~----w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 107 (1002)
++|.++.+||. |.++.|+.. ++-...... .+..--.+++++.|++++|.+++..+..+.++++|++|+
T Consensus 10 ~~~~~~~~C~~~~~~~~c~~~~~~------i~~~~~~~~--~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~ 81 (597)
T 3oja_B 10 KPRQPEYKCIDSNLQYDCVFYDVH------IDMQTQDVY--FGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLN 81 (597)
T ss_dssp -CCCSEECCCCC--CCSEEECSCE------ECSSCCCCE--ESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEE
T ss_pred cCCCCCCcCcccCcCceeEecCce------ecccccccc--cCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEE
Confidence 58998888874 766666531 111111111 111122467788888888888755555567788888888
Q ss_pred ecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeecccccc
Q 037042 108 FGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 108 L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
|++|.+++ +|...|..+++|++|+|++|.+++..|..|+++++|++|+|++|.|++..+..|+++++|++|+|++|.++
T Consensus 82 L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 160 (597)
T 3oja_B 82 LNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE 160 (597)
T ss_dssp CTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCC-CChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCC
Confidence 88888874 44445577888888888888888777777888888888888888888555555788888888888888887
Q ss_pred ccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCcc
Q 037042 188 GAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIP 267 (1002)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 267 (1002)
+ ..|..|+++++|++|+|++|++++.. +..+++|+.|++++|.+++.
T Consensus 161 ~-------------------------~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l----- 207 (597)
T 3oja_B 161 R-------------------------IEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL----- 207 (597)
T ss_dssp B-------------------------CCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE-----
T ss_pred C-------------------------CChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccc-----
Confidence 5 34566788888888888888887652 45567788888888887632
Q ss_pred ccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCC
Q 037042 268 YVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSN 347 (1002)
Q Consensus 268 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~ 347 (1002)
...++|++|++++|.++...+. + .++|+.|+|++|.+++ +..++.+++|+.|+|++|.++.++.. .|..
T Consensus 208 -~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~-----~~~~ 276 (597)
T 3oja_B 208 -AIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYH-----PFVK 276 (597)
T ss_dssp -ECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESG-----GGTT
T ss_pred -cCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHH-----HhcC
Confidence 2345788888888888754333 2 3688999999999886 36788899999999999998887543 3778
Q ss_pred CCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCE
Q 037042 348 CKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQV 427 (1002)
Q Consensus 348 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 427 (1002)
+++|+.|+|++|.+.++ |..+..+++|+.|+|++|.++ .+|..+..+++|+.
T Consensus 277 l~~L~~L~Ls~N~l~~l---------------------------~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~ 328 (597)
T 3oja_B 277 MQRLERLYISNNRLVAL---------------------------NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLEN 328 (597)
T ss_dssp CSSCCEEECTTSCCCEE---------------------------ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSE
T ss_pred ccCCCEEECCCCCCCCC---------------------------CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCE
Confidence 88888888888877643 334455677777888887777 46666777888888
Q ss_pred EEccCCcccccCCccccCCccccEEEccCCcCCcc
Q 037042 428 LYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGS 462 (1002)
Q Consensus 428 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 462 (1002)
|+|++|.+++.. +..+++|+.|+|++|.+.+.
T Consensus 329 L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 329 LYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp EECCSSCCCCCC---CCTTCCCSEEECCSSCEEHH
T ss_pred EECCCCCCCCcC---hhhcCCCCEEEeeCCCCCCh
Confidence 888888887542 55677888888888887753
No 262
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=342.14 Aligned_cols=275 Identities=18% Similarity=0.222 Sum_probs=196.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCch-------
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF------- 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 776 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++||||+++++++.....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467999999999999999999866 589999999987666667889999999999999999999998753211
Q ss_pred ---hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC-CCCcEEEe
Q 037042 777 ---KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG-DNMVAHLS 852 (1002)
Q Consensus 777 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~-~~~~~kl~ 852 (1002)
.....++||||++ |+|.+++... .+++..++.++.|+++||+||| +.+|+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 0113469999997 6999999653 4889999999999999999999 89999999999999997 67799999
Q ss_pred cccccccccCCCce-eeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 853 DFGITKLLTREDQF-VTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 853 DfGla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
|||+++........ .......+|..|+|||++.+ ..++.++|||||||++|||++|+.||....... ..........
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~ 242 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLILESIP 242 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHSC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcC
Confidence 99999876532211 11233457889999997655 678999999999999999999999997643211 1111111000
Q ss_pred ------hhhhhhc----ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 931 ------LISIMKI----VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 931 ------~~~~~~i----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
..+.... ..................++..+.+++.+||+.||++|||++|+++|-+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 308 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPY 308 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHH
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcc
Confidence 0000000 0000000000000011234677999999999999999999999999865
No 263
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.1e-37 Score=353.47 Aligned_cols=273 Identities=19% Similarity=0.232 Sum_probs=184.4
Q ss_pred CCCC-CceeeccCcceEEEEEeC---CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 707 GFSE-NNLIGRGGFGSVYKARIQ---DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 707 ~~~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.|+. .++||+|+||+||+|+.. +++.||||++.... ....+.+|++++++++||||+++++++...... ..+
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~--~~~ 96 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADR--KVW 96 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT--EEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC--eEE
Confidence 3554 468999999999999865 57899999997543 235678999999999999999999998653322 457
Q ss_pred HhhccCCCCChhHhhhccC--------CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee----CCCCcEE
Q 037042 783 LALEYMPHGSLEKYLYSSN--------YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL----GDNMVAH 850 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~--------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl----~~~~~~k 850 (1002)
+||||+++ +|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||+ +.++.+|
T Consensus 97 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 97 LLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEE
Confidence 99999965 8888775321 14889999999999999999999 8999999999999999 6789999
Q ss_pred EecccccccccCCCc-eeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCccccccc--------c
Q 037042 851 LSDFGITKLLTREDQ-FVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEG--------M 920 (1002)
Q Consensus 851 l~DfGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~--------~ 920 (1002)
|+|||+|+.+..... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.....+. .
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 252 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHD 252 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHH
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHH
Confidence 999999987654322 1223456789999999988774 58999999999999999999999997543210 1
Q ss_pred cHHHHHHHHHhhh---hhhccc------------CccCChhhh-HHH--hHHHHHHHHHHHHhHccccCCCCCCCHHHHH
Q 037042 921 TLKHWVNDWLLIS---IMKIVD------------GSLLSREDI-QFV--AKEQCMSFVFNMAMECTVESPEKRINAKEIV 982 (1002)
Q Consensus 921 ~~~~~~~~~~~~~---~~~i~~------------~~~~~~~~~-~~~--~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl 982 (1002)
.+...+....... ...+.. ......... ... ........+.+++.+||++||.+|||++|++
T Consensus 253 ~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L 332 (405)
T 3rgf_A 253 QLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM 332 (405)
T ss_dssp HHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 1111111110000 000000 000000000 000 0001145688999999999999999999999
Q ss_pred HHHHh
Q 037042 983 TRLLK 987 (1002)
Q Consensus 983 ~~L~~ 987 (1002)
+|-+-
T Consensus 333 ~hp~f 337 (405)
T 3rgf_A 333 QDPYF 337 (405)
T ss_dssp TSGGG
T ss_pred cChhh
Confidence 99764
No 264
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.1e-37 Score=344.99 Aligned_cols=265 Identities=18% Similarity=0.201 Sum_probs=178.6
Q ss_pred hcCCCCCc-eeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENN-LIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~-~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|++.+ .||+|+||+||+|+.. +|+.||||++.... .........++.++||||+++++++..........+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 56788854 6999999999999865 69999999987532 112222334566799999999999876332222457
Q ss_pred HhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCcEEEecccccc
Q 037042 783 LALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMVAHLSDFGITK 858 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla~ 858 (1002)
+||||+++|+|.+++..... .+++..++.++.||+.||+||| +++|+||||||+||+++. ++.+||+|||+++
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 99999999999999987643 6899999999999999999999 889999999999999975 4569999999998
Q ss_pred cccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcc
Q 037042 859 LLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIV 938 (1002)
Q Consensus 859 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~ 938 (1002)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........... . ...+.
T Consensus 180 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~--------~~~~~ 246 (336)
T 3fhr_A 180 ETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG-M--------KRRIR 246 (336)
T ss_dssp EC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred eccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh-H--------HHhhh
Confidence 655322 2345689999999999888899999999999999999999999976433211000 0 00000
Q ss_pred cCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 939 DGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
........ .....++..+.+++.+||..+|++|||+.|+++|-+--.....
T Consensus 247 ~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~ 297 (336)
T 3fhr_A 247 LGQYGFPN----PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVV 297 (336)
T ss_dssp ----CCCT----TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGGS
T ss_pred ccccccCc----hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccccC
Confidence 00000000 0012345678899999999999999999999998764444333
No 265
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=2.2e-36 Score=336.19 Aligned_cols=275 Identities=20% Similarity=0.270 Sum_probs=220.2
Q ss_pred CCCChhHHHHHHHHHHhccCCCCCccccCC----CCCCCCCcccccEeeC--------CCCcEEEEEeCCCCCccccCcc
Q 037042 5 TSNITTDLDALHALKTHITNDPTNFFAKNW----NSSISFCNWTGVTCDV--------HSHRVTALNISHLSLSGTIPSR 72 (1002)
Q Consensus 5 ~~~~~~~~~~l~~~k~~~~~~~~~~~~~~w----~~~~~~c~w~gv~c~~--------~~~~v~~L~l~~~~l~~~~p~~ 72 (1002)
.....+|++||++||+++..||.++.. +| ..+.++|.|.|++|+. ...+|+.|+|++|+++ .+|+.
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~-~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHS-AWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHH-HHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred cccCchHHHHHHHHHHhccCCchhhhh-hhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 456688999999999999889988764 79 5677899999999953 3468999999999998 88999
Q ss_pred cCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccC----
Q 037042 73 LGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSN---- 148 (1002)
Q Consensus 73 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~---- 148 (1002)
++++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..+ .++++|++|+|++|.+.+.+|..++.
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l-~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~ 176 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASI-ASLNRLRELSIRACPELTELPEPLASTDAS 176 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGG-GGCTTCCEEEEEEETTCCCCCSCSEEEC-C
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHH-hcCcCCCEEECCCCCCccccChhHhhccch
Confidence 999999999999999999 89999999999999999999998 788765 56888888888888888888877664
Q ss_pred -----CCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCcc
Q 037042 149 -----CTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLR 223 (1002)
Q Consensus 149 -----l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~ 223 (1002)
+++|++|+|++|+++ .+|..|+++++|++|+|++|+++ .+|..++.++
T Consensus 177 ~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~--------------------------~l~~~l~~l~ 229 (328)
T 4fcg_A 177 GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS--------------------------ALGPAIHHLP 229 (328)
T ss_dssp CCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC--------------------------CCCGGGGGCT
T ss_pred hhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC--------------------------cCchhhccCC
Confidence 777777777777777 67777777777777777777776 3555667777
Q ss_pred ccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeec
Q 037042 224 NLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLEL 303 (1002)
Q Consensus 224 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 303 (1002)
+|++|+|++|++.+.+|..+.. +++|++|+|++|++.+.+|..+.++++|++|+|
T Consensus 230 ~L~~L~Ls~n~~~~~~p~~~~~-------------------------l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L 284 (328)
T 4fcg_A 230 KLEELDLRGCTALRNYPPIFGG-------------------------RAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDL 284 (328)
T ss_dssp TCCEEECTTCTTCCBCCCCTTC-------------------------CCCCCEEECTTCTTCCBCCTTGGGCTTCCEEEC
T ss_pred CCCEEECcCCcchhhhHHHhcC-------------------------CCCCCEEECCCCCchhhcchhhhcCCCCCEEeC
Confidence 7777777777777666665554 455666666666666677878888888888888
Q ss_pred CCCccCCCCccccccccccchhccccccCccch
Q 037042 304 QKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLT 336 (1002)
Q Consensus 304 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~ 336 (1002)
++|++.+.+|..|+++++|+.+++..|.+..++
T Consensus 285 ~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~l~ 317 (328)
T 4fcg_A 285 RGCVNLSRLPSLIAQLPANCIILVPPHLQAQLD 317 (328)
T ss_dssp TTCTTCCCCCGGGGGSCTTCEEECCGGGSCC--
T ss_pred CCCCchhhccHHHhhccCceEEeCCHHHHHHHh
Confidence 888888888888888888888888887776654
No 266
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=9.5e-38 Score=347.03 Aligned_cols=260 Identities=20% Similarity=0.269 Sum_probs=199.0
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.++|+..+.||+|+||+||+|+..+ .||+|+++... ....+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~ 105 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP----HLA 105 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS----CEE
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC----ceE
Confidence 4679999999999999999998753 59999986432 223456778999999999999999999998766 467
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccC
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTR 862 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 862 (1002)
+||||+++++|.+++...+..+++..+..++.||++||+||| +.+|+||||||+||+++ ++.+||+|||+++....
T Consensus 106 iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp EECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred EEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 999999999999999887667899999999999999999999 89999999999999998 68999999999876532
Q ss_pred CCc---eeeeccCCCCcccccccccCC---------CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 863 EDQ---FVTQTQTPATIGYMALEYGSE---------GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 863 ~~~---~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~-- 254 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-----AIIWQ-- 254 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-----HHHHH--
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH--
Confidence 211 112234568999999998764 45789999999999999999999999764221 11111
Q ss_pred hhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 931 LISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 931 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
+..-..+.... ..++..+.+++.+||..+|++|||+.|++++|+++.....
T Consensus 255 ---~~~~~~~~~~~---------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 255 ---MGTGMKPNLSQ---------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp ---HHTTCCCCCCC---------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred ---hccCCCCCCCc---------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 01101111100 1123458899999999999999999999999999986543
No 267
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=9e-37 Score=342.13 Aligned_cols=265 Identities=18% Similarity=0.237 Sum_probs=202.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe--CCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCC------cceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI--QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRN------IIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 776 (1002)
.++|++.+.||+|+||+||+|.. .+++.||||+++.. ....+.+.+|+++++.++|++ |+++++++...+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~- 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG- 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT-
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC-
Confidence 35799999999999999999986 36899999999754 334577889999999987654 999999998766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC----------
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---------- 845 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---------- 845 (1002)
..++||||+ +++|.+++...+. .+++..+..++.||++||+||| +++|+||||||+||+++.
T Consensus 91 ---~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 91 ---HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp ---EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC--
T ss_pred ---cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCc
Confidence 567999999 8899999977653 5889999999999999999999 899999999999999987
Q ss_pred ---------CCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccc
Q 037042 846 ---------NMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIF 916 (1002)
Q Consensus 846 ---------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~ 916 (1002)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEHH-----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSCC-----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred cccccccccCCCceEeeCcccccCcccc-----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 6789999999998654322 34578999999999999899999999999999999999999997642
Q ss_pred cccccHHHHHHHHHh--hhh-hhccc------CccCChh---------------hhHHHhHHHHHHHHHHHHhHccccCC
Q 037042 917 NEGMTLKHWVNDWLL--ISI-MKIVD------GSLLSRE---------------DIQFVAKEQCMSFVFNMAMECTVESP 972 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~--~~~-~~i~~------~~~~~~~---------------~~~~~~~~~~~~~l~~li~~cl~~~P 972 (1002)
... ........... ..+ ..... ....... .........++..+.+++.+||+.||
T Consensus 239 ~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 317 (339)
T 1z57_A 239 SKE-HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317 (339)
T ss_dssp HHH-HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred hHH-HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence 211 11111100000 000 00000 0000000 00001123456789999999999999
Q ss_pred CCCCCHHHHHHH
Q 037042 973 EKRINAKEIVTR 984 (1002)
Q Consensus 973 ~~Rpt~~evl~~ 984 (1002)
++|||+.|+++|
T Consensus 318 ~~Rpt~~ell~h 329 (339)
T 1z57_A 318 AKRITLREALKH 329 (339)
T ss_dssp TTSCCHHHHTTS
T ss_pred ccccCHHHHhcC
Confidence 999999999987
No 268
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.7e-37 Score=339.47 Aligned_cols=258 Identities=22% Similarity=0.301 Sum_probs=194.6
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCch-------
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF------- 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 776 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|++++++++||||+++++++.....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 457899999999999999999864 7999999999654 3445778899999999999999999998865321
Q ss_pred --hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecc
Q 037042 777 --KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 777 --~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
.....++||||+++|+|.+++......+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 012347999999999999999876667888999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCCc------------eeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCccccccccc
Q 037042 855 GITKLLTREDQ------------FVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMT 921 (1002)
Q Consensus 855 Gla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~ 921 (1002)
|+++....... ........||..|+|||++.+. .++.++||||+||++|||++ ||......
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~--- 234 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER--- 234 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH---
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH---
Confidence 99987643211 1112345689999999998764 68999999999999999998 55432111
Q ss_pred HHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 922 LKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 922 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
...... +.......+.. .+..++..+.+++.+||+.||++|||+.|+++|-
T Consensus 235 -~~~~~~--------~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 285 (303)
T 1zy4_A 235 -VNILKK--------LRSVSIEFPPD----FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285 (303)
T ss_dssp -HHHHHH--------HHSTTCCCCTT----CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred -HHHHHh--------ccccccccCcc----ccccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence 111111 11110000000 1123345688999999999999999999999874
No 269
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.2e-36 Score=346.60 Aligned_cols=200 Identities=24% Similarity=0.320 Sum_probs=170.3
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CC-----CcceeeeEEecCch
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HR-----NIIKIISCCSIGDF 776 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~~ 776 (1002)
..++|++.+.||+|+||+||+|+.. +++.||||+++.. ......+..|+++++.++ |+ +|+++++++...+
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~- 129 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN- 129 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT-
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC-
Confidence 4578999999999999999999865 6889999999754 234567788999998885 55 4999999988766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC--CCCcEEEec
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG--DNMVAHLSD 853 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~--~~~~~kl~D 853 (1002)
..++||||+++ +|.+++.... ..+++..+..++.|++.||+|||. +..+|+||||||+|||++ .++.+||+|
T Consensus 130 ---~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 130 ---HLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp ---EEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred ---ceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 56899999964 9999998754 358999999999999999999993 247899999999999994 578899999
Q ss_pred ccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCccc
Q 037042 854 FGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEI 915 (1002)
Q Consensus 854 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~ 915 (1002)
||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 205 FG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 205 FGSSCQLGQRI-----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CTTCEETTCCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCceeccccc-----ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99998765322 3457899999999999999999999999999999999999999764
No 270
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=6.3e-37 Score=348.38 Aligned_cols=272 Identities=15% Similarity=0.191 Sum_probs=202.2
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-----------CCCcceeeeEEe
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-----------HRNIIKIISCCS 772 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~ 772 (1002)
.++|+..+.||+|+||+||+|+. .+++.||||++... ......+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35799999999999999999985 47899999999754 234567888999999886 899999999987
Q ss_pred cCchhhHHHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCC-CcEEccCCCCCeeeC------
Q 037042 773 IGDFKALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYST-PVIHCDLKPSNVLLG------ 844 (1002)
Q Consensus 773 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiHrDlkp~NILl~------ 844 (1002)
..+......++||||+ +++|.+++.... ..+++..+..++.||+.||+||| ++ +|+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCc
Confidence 6543333457999999 889999997643 35899999999999999999999 77 999999999999994
Q ss_pred CCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccc----
Q 037042 845 DNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGM---- 920 (1002)
Q Consensus 845 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~---- 920 (1002)
..+.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEHY-----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBCC-----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCCC-----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 45589999999998765422 345789999999999988999999999999999999999999976432110
Q ss_pred -cHHHHHHHHHhhh-------------------hhhcccCccCChh---hhHHHhHHHHHHHHHHHHhHccccCCCCCCC
Q 037042 921 -TLKHWVNDWLLIS-------------------IMKIVDGSLLSRE---DIQFVAKEQCMSFVFNMAMECTVESPEKRIN 977 (1002)
Q Consensus 921 -~~~~~~~~~~~~~-------------------~~~i~~~~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt 977 (1002)
.+........... ...+......... ......+..++..+.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 1111111000000 0000000000000 0001123456788999999999999999999
Q ss_pred HHHHHHHHH
Q 037042 978 AKEIVTRLL 986 (1002)
Q Consensus 978 ~~evl~~L~ 986 (1002)
++|+++|-+
T Consensus 328 ~~ell~hp~ 336 (373)
T 1q8y_A 328 AGGLVNHPW 336 (373)
T ss_dssp HHHHHTCGG
T ss_pred HHHHhhChh
Confidence 999999855
No 271
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=7.6e-37 Score=344.75 Aligned_cols=267 Identities=19% Similarity=0.219 Sum_probs=197.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh--H
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA--L 779 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--~ 779 (1002)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.++++++||||+++++++....... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 357999999999999999999864 69999999997542 334567889999999999999999999987654211 1
Q ss_pred HHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 780 FKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 780 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++||||++ |+|.+++.. .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 2379999997 599888753 3899999999999999999999 89999999999999999999999999999986
Q ss_pred ccCCCceeeeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh--hh-h
Q 037042 860 LTREDQFVTQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI--SI-M 935 (1002)
Q Consensus 860 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~-~ 935 (1002)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .+.......... .. .
T Consensus 176 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 176 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHHHT
T ss_pred CCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHH
Confidence 5432 234578999999998776 678999999999999999999999997642211 111111100000 00 0
Q ss_pred hccc--------C--ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 936 KIVD--------G--SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 936 ~i~~--------~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+.+ . ....... . .....++..+.+++.+||..||++|||++|+++|-+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 308 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDF-T-QLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 308 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCT-T-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred HHhhHHHHHHHHhCcCCCCccH-H-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 0000 0 0000000 0 001234567899999999999999999999998843
No 272
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1e-36 Score=344.80 Aligned_cols=280 Identities=19% Similarity=0.216 Sum_probs=192.0
Q ss_pred HHHHhhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCcceeeeEEecCch--
Q 037042 700 ELCQATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF-- 776 (1002)
Q Consensus 700 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-- 776 (1002)
......++|++.+.||+|+||+||+|+.. +|+.||||++.... .......+|++.++.++||||+++++++...+.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 34456789999999999999999999864 68999999986543 223455678888889999999999999865331
Q ss_pred -hhHHHHHhhccCCCCChhHhhh---ccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-CCcEEE
Q 037042 777 -KALFKALALEYMPHGSLEKYLY---SSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-NMVAHL 851 (1002)
Q Consensus 777 -~~~~~~lv~e~~~~g~L~~~l~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-~~~~kl 851 (1002)
...+.++||||+++ ++.+.+. .....+++..+..++.|++.|+.||| .++++|+||||||+||+++. ++.+||
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~kl 173 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKL 173 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEEE
Confidence 11235689999987 5544333 23346889999999999999999999 34789999999999999996 899999
Q ss_pred ecccccccccCCCceeeeccCCCCcccccccccCCC-CcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHH
Q 037042 852 SDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG-RVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWL 930 (1002)
Q Consensus 852 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~ 930 (1002)
+|||+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+..+.....
T Consensus 174 ~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~ 249 (360)
T 3e3p_A 174 CDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVLG 249 (360)
T ss_dssp CCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHC
T ss_pred eeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHcC
Confidence 99999987764432 2345789999999987654 4899999999999999999999999764322 11222211110
Q ss_pred hh--hhhhcccCcc----------CChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 931 LI--SIMKIVDGSL----------LSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 931 ~~--~~~~i~~~~~----------~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.. ......++.. ..............+..+.+++.+||+.||++|||+.|+++|-+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 317 (360)
T 3e3p_A 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPY 317 (360)
T ss_dssp CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGG
T ss_pred CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcc
Confidence 00 0000000000 00000000011124567999999999999999999999999844
No 273
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.3e-36 Score=341.01 Aligned_cols=275 Identities=22% Similarity=0.192 Sum_probs=201.2
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchh-hHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFK-ALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~~ 781 (1002)
.++|+..+.||+|+||+||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++...... ....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467999999999999999999865 68999999997543 33456788999999999999999999988654211 1245
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
++||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 79999997 5999998764 4899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCcee--------eeccCCCCcccccccccCC-CCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 862 REDQFV--------TQTQTPATIGYMALEYGSE-GRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 862 ~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
...... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||........ ...........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~ 242 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LLLIFGIIGTP 242 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCC
Confidence 432111 1223568999999997654 6789999999999999999999999976422110 11111000000
Q ss_pred h---h---------hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 933 S---I---------MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 933 ~---~---------~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
. . .+...................++..+.+++.+||+.||++|||+.|+++|-+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 308 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence 0 0 0000000000000000011234567899999999999999999999999854
No 274
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.3e-36 Score=338.86 Aligned_cols=274 Identities=23% Similarity=0.283 Sum_probs=201.3
Q ss_pred hhcCCCCCceeeccCcceEEEEEe--CCCcEEEEEEeecccc--hhHHHHHHHHHHHHhc---cCCCcceeeeEEecCch
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI--QDGMEVAVKVFNQQCG--RAFKSFDVECEVMKSI---RHRNIIKIISCCSIGDF 776 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~ 776 (1002)
..++|+..+.||+|+||.||+|+. .+|+.||||++..... .....+.+|+.+++.+ +||||+++++++.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999986 4688999999874322 2234566788777766 89999999999862110
Q ss_pred -hhHHHHHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecc
Q 037042 777 -KALFKALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDF 854 (1002)
Q Consensus 777 -~~~~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 854 (1002)
.....++||||++ |+|.+++..... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecC
Confidence 1114579999998 599999876543 5899999999999999999999 899999999999999999999999999
Q ss_pred cccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh
Q 037042 855 GITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 855 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
|+++...... ......||..|+|||++.+..++.++|||||||++|||++|+.||....... .+............
T Consensus 165 g~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 165 GLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGE 240 (326)
T ss_dssp CSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCG
T ss_pred cccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCc
Confidence 9998665332 2234578999999999998899999999999999999999999997643211 11111111000000
Q ss_pred hhccc------CccCC-hhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 935 MKIVD------GSLLS-REDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 935 ~~i~~------~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
..... ..... ...........++..+.+++.+||..+|++|||+.|+++|-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 298 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 298 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 00000 00000 00000001123456788999999999999999999999873
No 275
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.2e-36 Score=332.69 Aligned_cols=254 Identities=21% Similarity=0.274 Sum_probs=202.3
Q ss_pred hhcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
..++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+ .
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~ 95 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS----S 95 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----E
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC----e
Confidence 3467999999999999999999865 68999999987542 234678899999999999999999999998766 4
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCcEEEeccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMVAHLSDFGIT 857 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla 857 (1002)
.++||||+++++|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 579999999999999887654 4899999999999999999999 899999999999999975 457999999999
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhc
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKI 937 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i 937 (1002)
......... ....||+.|+|||++.+ .++.++||||||+++|||++|+.||...... .......
T Consensus 172 ~~~~~~~~~---~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~------- 235 (287)
T 2wei_A 172 TCFQQNTKM---KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-----DILKRVE------- 235 (287)
T ss_dssp GTBCCCSSC---SCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHH-------
T ss_pred eeecCCCcc---ccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH-----HHHHHHH-------
Confidence 876543321 23357889999998765 4899999999999999999999999763221 1111111
Q ss_pred ccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 938 VDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
.+...... .....++..+.+++.+||+.+|++|||+.|+++|-.
T Consensus 236 -~~~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 279 (287)
T 2wei_A 236 -TGKYAFDL----PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279 (287)
T ss_dssp -HCCCCCCS----GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred -cCCCCCCc----hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHH
Confidence 11100000 001223467889999999999999999999999743
No 276
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.4e-36 Score=351.47 Aligned_cols=251 Identities=22% Similarity=0.308 Sum_probs=186.0
Q ss_pred CCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHHHhh
Q 037042 707 GFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.... ..++||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~----~~~lv~ 88 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDR----FLYIAL 88 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSS----EEEEEE
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCC----eEEEEE
Confidence 45556889999999998777678999999998753 235678899999986 8999999999988766 567999
Q ss_pred ccCCCCChhHhhhccCCc------CCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCC-------------
Q 037042 786 EYMPHGSLEKYLYSSNYI------LDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDN------------- 846 (1002)
Q Consensus 786 e~~~~g~L~~~l~~~~~~------l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~------------- 846 (1002)
||++ |+|.+++...... .++..++.++.||+.||+||| +.+|+||||||+|||++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCc
Confidence 9996 6999999865431 122345679999999999999 8999999999999999654
Q ss_pred CcEEEecccccccccCCCcee--eeccCCCCcccccccccCC-------CCcCcccchHHHHHHHHHHHh-CCCCCcccc
Q 037042 847 MVAHLSDFGITKLLTREDQFV--TQTQTPATIGYMALEYGSE-------GRVSTNGDVYNFGVMLMETFT-GKKPTNEIF 916 (1002)
Q Consensus 847 ~~~kl~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~ 916 (1002)
+.+||+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||....
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 589999999998776543211 1234579999999998865 568999999999999999999 999996532
Q ss_pred cccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 917 NEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
... ..+. ......... .......++..+.+++.+||+.||++|||+.|+++|
T Consensus 245 ~~~---~~i~--------~~~~~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 245 SRE---SNII--------RGIFSLDEM-----KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp THH---HHHH--------HTCCCCCCC-----TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhH---HHHh--------cCCCCcccc-----cccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 211 0100 001000000 011123456789999999999999999999999976
No 277
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=8.8e-37 Score=340.44 Aligned_cols=256 Identities=24% Similarity=0.304 Sum_probs=179.1
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc-chhHHHHHHHHH-HHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC-GRAFKSFDVECE-VMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ......+..|+. +++.++||||+++++++...+ ..
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~----~~ 96 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG----DC 96 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS----EE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC----ce
Confidence 367899999999999999999864 78999999997653 233445556666 677789999999999998766 45
Q ss_pred HHhhccCCCCChhHhhhc----cCCcCCHHHHHHHHHHHHHHHHHHHcCCCC-CcEEccCCCCCeeeCCCCcEEEecccc
Q 037042 782 ALALEYMPHGSLEKYLYS----SNYILDIFQRLNIMIDVASALEYLYFGYST-PVIHCDLKPSNVLLGDNMVAHLSDFGI 856 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGl 856 (1002)
++||||+++ +|.+++.. ....+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||+
T Consensus 97 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 172 (327)
T 3aln_A 97 WICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGI 172 (327)
T ss_dssp EEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSS
T ss_pred EEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCC
Confidence 799999985 88777753 2346899999999999999999999 77 999999999999999999999999999
Q ss_pred cccccCCCceeeeccCCCCccccccccc----CCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhh
Q 037042 857 TKLLTREDQFVTQTQTPATIGYMALEYG----SEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLI 932 (1002)
Q Consensus 857 a~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 932 (1002)
++....... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||........
T Consensus 173 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------------ 237 (327)
T 3aln_A 173 SGQLVDSIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD------------ 237 (327)
T ss_dssp SCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------------
T ss_pred ceecccccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH------------
Confidence 987654322 2334689999999998 456789999999999999999999999975322111
Q ss_pred hhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 933 SIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 933 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
....+.......... .....++..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 238 ~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~ 288 (327)
T 3aln_A 238 QLTQVVKGDPPQLSN---SEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPF 288 (327)
T ss_dssp --CCCCCSCCCCCCC---CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred HHHHHhcCCCCCCCC---cccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChH
Confidence 011222211110000 001123467899999999999999999999998744
No 278
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-35 Score=339.01 Aligned_cols=333 Identities=19% Similarity=0.174 Sum_probs=225.4
Q ss_pred ccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCc
Q 037042 273 NLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLE 352 (1002)
Q Consensus 273 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~ 352 (1002)
+++.|++++|.++...+..+..+++|++|+|++|.++++.+..|+++++|++|+|++|+++.++.. .+.++++|+
T Consensus 46 ~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~ 120 (390)
T 3o6n_A 46 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH-----VFQNVPLLT 120 (390)
T ss_dssp CCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCTTCC
T ss_pred CceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHH-----HhcCCCCCC
Confidence 344444444444332222333444444444444444444444444444444444444444443322 134444444
Q ss_pred EEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccC
Q 037042 353 FIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPD 432 (1002)
Q Consensus 353 ~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 432 (1002)
+|+|++|.+..+... .+. -.++|++|++++|++++..|..|..+++|++|++++|++++. .+..+++|+.|++++
T Consensus 121 ~L~L~~n~l~~l~~~-~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~ 195 (390)
T 3o6n_A 121 VLVLERNDLSSLPRG-IFH-NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSY 195 (390)
T ss_dssp EEECCSSCCCCCCTT-TTT-TCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCS
T ss_pred EEECCCCccCcCCHH-Hhc-CCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccc
Confidence 444444444433211 011 123455555555555555667788888888888888888764 356678888889988
Q ss_pred CcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCc
Q 037042 433 NKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLP 512 (1002)
Q Consensus 433 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 512 (1002)
|.+++. ....+|+.|++++|.+... |.. ..++|+.|++++|.+++. ..+..+++|++|++++|.+++..|
T Consensus 196 n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~ 265 (390)
T 3o6n_A 196 NLLSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMY 265 (390)
T ss_dssp SCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEES
T ss_pred cccccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcCh
Confidence 888742 2345788999999998865 332 246899999999999875 578889999999999999998888
Q ss_pred ccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCc
Q 037042 513 LEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSY 592 (1002)
Q Consensus 513 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 592 (1002)
..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|++. | +..+++
T Consensus 266 ~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~ 340 (390)
T 3o6n_A 266 HPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHT 340 (390)
T ss_dssp GGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCC
T ss_pred hHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhcc
Confidence 899999999999999999986 4667788999999999999999 5777889999999999999999854 3 778899
Q ss_pred cceeeCCCCcCcccCCCCCCCCCCccccccCCCCCCCCC
Q 037042 593 LKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSP 631 (1002)
Q Consensus 593 L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 631 (1002)
|+.|++++|++++.... ..+..+....+.++...|..+
T Consensus 341 L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 341 LKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp CSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTT
T ss_pred CCEEEcCCCCccchhHH-HHHHHHHhhcccccCceeccc
Confidence 99999999999985432 234455555667777777654
No 279
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=351.22 Aligned_cols=250 Identities=22% Similarity=0.368 Sum_probs=187.3
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHHHHh
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
.+|+..+.||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +|||||++++++.... ..++|
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~----~~~lv 96 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQ----FQYIA 96 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETT----EEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCC----EEEEE
Confidence 46888899999999997765566799999999875432 2356799999999 7999999999998766 55899
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC-----CCcEEEeccccccc
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD-----NMVAHLSDFGITKL 859 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~-----~~~~kl~DfGla~~ 859 (1002)
|||++ |+|.+++...........+..++.||++||+||| +.+|+||||||+||+++. ...+||+|||+|+.
T Consensus 97 ~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp EECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred EECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 99996 5999999877655555567789999999999999 899999999999999953 34688999999987
Q ss_pred ccCCCc-eeeeccCCCCcccccccccC---CCCcCcccchHHHHHHHHHHHh-CCCCCcccccccccHHHHHHHHHhhhh
Q 037042 860 LTREDQ-FVTQTQTPATIGYMALEYGS---EGRVSTNGDVYNFGVMLMETFT-GKKPTNEIFNEGMTLKHWVNDWLLISI 934 (1002)
Q Consensus 860 ~~~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 934 (1002)
...... ........||+.|+|||++. ...++.++||||+||++|||++ |..||........ .. .
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~------~~-----~ 241 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA------NI-----L 241 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH------HH-----H
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH------HH-----H
Confidence 654322 12234567999999999987 4567889999999999999999 9999865322110 00 0
Q ss_pred hhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHH
Q 037042 935 MKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTR 984 (1002)
Q Consensus 935 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~ 984 (1002)
.......... ........+.+++.+||+.||++|||+.|+++|
T Consensus 242 ~~~~~~~~~~-------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 242 LGACSLDCLH-------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp TTCCCCTTSC-------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccCCccccC-------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 0000000000 112234567899999999999999999999975
No 280
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=337.33 Aligned_cols=246 Identities=23% Similarity=0.317 Sum_probs=193.0
Q ss_pred HHhhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccch------hHHHHHHHHHHHHhc----cCCCcceeeeE
Q 037042 702 CQATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGR------AFKSFDVECEVMKSI----RHRNIIKIISC 770 (1002)
Q Consensus 702 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~~~~~ 770 (1002)
....++|+..+.||+|+||.||+|+. .+++.||||++...... ....+.+|+.+++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34457899999999999999999985 46899999999754321 223456799999998 89999999999
Q ss_pred EecCchhhHHHHHhhcc-CCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC-CCCc
Q 037042 771 CSIGDFKALFKALALEY-MPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG-DNMV 848 (1002)
Q Consensus 771 ~~~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~-~~~~ 848 (1002)
+...+ ..++|+|| +.+++|.+++...+ .+++..++.++.||++||+||| +.+|+||||||+||+++ .++.
T Consensus 107 ~~~~~----~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 178 (312)
T 2iwi_A 107 FETQE----GFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGC 178 (312)
T ss_dssp C---------CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTE
T ss_pred EecCC----eEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCe
Confidence 87665 56799999 78999999998754 4899999999999999999999 88999999999999998 8899
Q ss_pred EEEecccccccccCCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHH
Q 037042 849 AHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVN 927 (1002)
Q Consensus 849 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~ 927 (1002)
+||+|||+++...... .....||..|+|||++.+..+ +.++||||+||++|||++|+.||.....
T Consensus 179 ~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---------- 244 (312)
T 2iwi_A 179 AKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE---------- 244 (312)
T ss_dssp EEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----------
T ss_pred EEEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH----------
Confidence 9999999998765432 234568999999998876665 4589999999999999999999965211
Q ss_pred HHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 928 DWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 928 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+....... +..++..+.+++.+||+.+|++|||+.|+++|-+
T Consensus 245 ---------~~~~~~~~--------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~ 286 (312)
T 2iwi_A 245 ---------ILEAELHF--------PAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPW 286 (312)
T ss_dssp ---------HHHTCCCC--------CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred ---------HhhhccCC--------cccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 00011110 1123456889999999999999999999999754
No 281
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=7.7e-37 Score=339.53 Aligned_cols=244 Identities=22% Similarity=0.290 Sum_probs=198.9
Q ss_pred hhcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecccc------hhHHHHHHHHHHHHhcc--CCCcceeeeEEecC
Q 037042 704 ATDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCG------RAFKSFDVECEVMKSIR--HRNIIKIISCCSIG 774 (1002)
Q Consensus 704 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~ 774 (1002)
..++|+..+.||+|+||+||+|+. .+++.||||++..... .....+.+|+.++++++ ||||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 456799999999999999999985 4789999999975421 12245677999999996 59999999999877
Q ss_pred chhhHHHHHhhccCCC-CChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeC-CCCcEEEe
Q 037042 775 DFKALFKALALEYMPH-GSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLG-DNMVAHLS 852 (1002)
Q Consensus 775 ~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~-~~~~~kl~ 852 (1002)
+ ..++|+||+.+ ++|.+++...+ .+++..+..++.||++||+||| +.+|+||||||+||+++ .++.+||+
T Consensus 121 ~----~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 121 D----SFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp S----EEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEEC
T ss_pred C----cEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEe
Confidence 6 45799999976 89999997654 4899999999999999999999 89999999999999998 78999999
Q ss_pred cccccccccCCCceeeeccCCCCcccccccccCCCCc-CcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh
Q 037042 853 DFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRV-STNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL 931 (1002)
Q Consensus 853 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~ 931 (1002)
|||+++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....
T Consensus 193 Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------------- 254 (320)
T 3a99_A 193 DFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------------- 254 (320)
T ss_dssp CCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------------
T ss_pred eCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--------------
Confidence 999998765432 234568999999998877665 7889999999999999999999965311
Q ss_pred hhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHH
Q 037042 932 ISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLL 986 (1002)
Q Consensus 932 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~ 986 (1002)
+....... +..++..+.+++.+||+.+|++|||++|+++|-+
T Consensus 255 -----~~~~~~~~--------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~ 296 (320)
T 3a99_A 255 -----IIRGQVFF--------RQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 296 (320)
T ss_dssp -----HHHCCCCC--------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred -----hhcccccc--------cccCCHHHHHHHHHHccCChhhCcCHHHHhcCHh
Confidence 00000000 0113456889999999999999999999998744
No 282
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=6.6e-36 Score=337.46 Aligned_cols=266 Identities=21% Similarity=0.284 Sum_probs=199.5
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CC-cEEEEEEeecccchhHHHHHHHHHHHHhccCCC------cceeeeEEecCch
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DG-MEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRN------IIKIISCCSIGDF 776 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 776 (1002)
.++|++.+.||+|+||+||+|+.. ++ +.||||+++.. ....+.+.+|++++++++|++ ++.+++++...+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~- 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG- 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT-
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC-
Confidence 467999999999999999999864 34 78999999754 334567888999999998765 889999887766
Q ss_pred hhHHHHHhhccCCCCChhHhhhccC-CcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeee------------
Q 037042 777 KALFKALALEYMPHGSLEKYLYSSN-YILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLL------------ 843 (1002)
Q Consensus 777 ~~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl------------ 843 (1002)
..++||||+ ++++.+++.... ..+++..+..++.||+.||+||| +++|+||||||+||++
T Consensus 96 ---~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 96 ---HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp ---EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC
T ss_pred ---eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccc
Confidence 567999999 557777666543 46899999999999999999999 8999999999999999
Q ss_pred -------CCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccc
Q 037042 844 -------GDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIF 916 (1002)
Q Consensus 844 -------~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~ 916 (1002)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 567899999999998654322 34578999999999999999999999999999999999999997643
Q ss_pred cccccHHHHHHHHHhh---hh-hh------cccCccCChhh---------------hHHHhHHHHHHHHHHHHhHccccC
Q 037042 917 NEGMTLKHWVNDWLLI---SI-MK------IVDGSLLSRED---------------IQFVAKEQCMSFVFNMAMECTVES 971 (1002)
Q Consensus 917 ~~~~~~~~~~~~~~~~---~~-~~------i~~~~~~~~~~---------------~~~~~~~~~~~~l~~li~~cl~~~ 971 (1002)
.... .. .+...... .. .. ........... ........+...+.+++.+||+.|
T Consensus 244 ~~~~-~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 321 (355)
T 2eu9_A 244 NREH-LV-MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFD 321 (355)
T ss_dssp HHHH-HH-HHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS
T ss_pred HHHH-HH-HHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCC
Confidence 2111 11 11110000 00 00 00000000000 000011234568999999999999
Q ss_pred CCCCCCHHHHHHHHH
Q 037042 972 PEKRINAKEIVTRLL 986 (1002)
Q Consensus 972 P~~Rpt~~evl~~L~ 986 (1002)
|++|||+.|+++|-+
T Consensus 322 P~~Rpt~~e~l~hp~ 336 (355)
T 2eu9_A 322 PAQRITLAEALLHPF 336 (355)
T ss_dssp TTTSCCHHHHTTSGG
T ss_pred hhhCcCHHHHhcChh
Confidence 999999999998743
No 283
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.9e-36 Score=330.20 Aligned_cols=256 Identities=35% Similarity=0.600 Sum_probs=243.3
Q ss_pred ccccEEecCCCCCCC--CCCcccCCCCCccEEEccC-CccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccE
Q 037042 375 HSLKIFDMSDCNVSG--SIPEEIGNLTNLIGFYLGG-NNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQ 451 (1002)
Q Consensus 375 ~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 451 (1002)
.+++.|+|++|++++ .+|..|+++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..+..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 368888899999988 8899999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEccCCcCCccCCccccCCccCcccccccccccccCCccccccc-cCceeeccCCCCCCCCcccccccccceeeeCCCCc
Q 037042 452 LDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLK-DILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNN 530 (1002)
Q Consensus 452 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 530 (1002)
|+|++|++++.+|..|..+++|++|+|++|++++.+|..+..++ +|++|++++|++++.+|..+..++ |+.|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999999999999999999999999999999999999998 999999999999999999999998 9999999999
Q ss_pred cCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCCC
Q 037042 531 FSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG 610 (1002)
Q Consensus 531 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 610 (1002)
+++.+|..|..+++|+.|+|++|.+++.+|. +..+++|++|+|++|+|++.+|..+..+++|+.|+|++|+++|.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9999999999999999999999999977765 889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCCCCCCCCC
Q 037042 611 GSFGNFSAESFEGNKLLCGSPN 632 (1002)
Q Consensus 611 ~~~~~~~~~~~~~n~~~c~~~~ 632 (1002)
+.+.++....+.+|+++||.|.
T Consensus 288 ~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp TTGGGSCGGGTCSSSEEESTTS
T ss_pred ccccccChHHhcCCCCccCCCC
Confidence 8888999999999999999873
No 284
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.4e-35 Score=354.61 Aligned_cols=335 Identities=19% Similarity=0.178 Sum_probs=266.9
Q ss_pred CCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCC
Q 037042 271 LPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKY 350 (1002)
Q Consensus 271 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~ 350 (1002)
+++++.|++++|.+...++..+.++++|++|+|++|.|+++.|..|+++++|++|+|++|.|+.++.. .|+++++
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~ 124 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH-----VFQNVPL 124 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCTT
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHH-----HHcCCCC
Confidence 45666677777777655555566677777777777777776666777777777777777777776643 2566777
Q ss_pred CcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEc
Q 037042 351 LEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYF 430 (1002)
Q Consensus 351 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 430 (1002)
|++|+|++|.|.++++. .+. -.++|++|+|++|++++..|..|+.+++|+.|+|++|.+++. .+..+++|+.|++
T Consensus 125 L~~L~L~~n~l~~l~~~-~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l 199 (597)
T 3oja_B 125 LTVLVLERNDLSSLPRG-IFH-NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANV 199 (597)
T ss_dssp CCEEECCSSCCCCCCTT-TTT-TCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEEC
T ss_pred CCEEEeeCCCCCCCCHH-Hhc-cCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---Chhhhhhhhhhhc
Confidence 77777777777655332 112 234677788888888888888999999999999999999875 3567889999999
Q ss_pred cCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCC
Q 037042 431 PDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGP 510 (1002)
Q Consensus 431 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 510 (1002)
++|.+++. ....+|+.|++++|.+....+.. .++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++.
T Consensus 200 ~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~ 269 (597)
T 3oja_B 200 SYNLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKI 269 (597)
T ss_dssp CSSCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEE
T ss_pred ccCccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCC
Confidence 99998853 34468999999999998654433 26899999999999874 7899999999999999999999
Q ss_pred CcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCC
Q 037042 511 LPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKL 590 (1002)
Q Consensus 511 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 590 (1002)
.|..|+.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|+|++. | +..+
T Consensus 270 ~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~ 344 (597)
T 3oja_B 270 MYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTH 344 (597)
T ss_dssp ESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTT
T ss_pred CHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhc
Confidence 89999999999999999999997 4777888999999999999999 6888899999999999999999864 3 6778
Q ss_pred CccceeeCCCCcCcccCCCCCCCCCCccccccCCCCCCCCC
Q 037042 591 SYLKDLNLSFNKLEGEIPKGGSFGNFSAESFEGNKLLCGSP 631 (1002)
Q Consensus 591 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 631 (1002)
++|+.|+|++|+|+|..+. ..+..+....+.++...|+.+
T Consensus 345 ~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 345 HTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 9999999999999987543 345666667788888888764
No 285
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=335.46 Aligned_cols=253 Identities=22% Similarity=0.254 Sum_probs=180.4
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeecccch--hHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCGR--AFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|+..+.||+|+||.||+|+.. +|+.||||++...... ....+..+..+++.++||||+++++++...+ ..
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~----~~ 99 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT----DV 99 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----EE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC----cE
Confidence 457888999999999999999865 7899999999765322 2233444555788889999999999998776 56
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCC-CcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYST-PVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
++||||+ ++.+..+.......+++..+..++.|+++||+||| ++ +|+||||||+||+++.++.+||+|||++...
T Consensus 100 ~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 100 FIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp EEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred EEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 7999999 55666666554556899999999999999999999 74 9999999999999999999999999999766
Q ss_pred cCCCceeeeccCCCCcccccccccC-----CCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhh
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGS-----EGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIM 935 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1002)
..... .....||+.|+|||++. ...++.++|||||||++|||++|+.||........ .........
T Consensus 176 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~-- 246 (318)
T 2dyl_A 176 VDDKA---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE----VLTKVLQEE-- 246 (318)
T ss_dssp --------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH----HHHHHHHSC--
T ss_pred cCCcc---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH----HHHHHhccC--
Confidence 54322 23456899999999874 45689999999999999999999999975322111 111110000
Q ss_pred hcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHH
Q 037042 936 KIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRL 985 (1002)
Q Consensus 936 ~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L 985 (1002)
...... ...++..+.+++.+||+.||.+||++.|+++|-
T Consensus 247 ---~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 285 (318)
T 2dyl_A 247 ---PPLLPG--------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHS 285 (318)
T ss_dssp ---CCCCCS--------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred ---CCCCCc--------cCCCCHHHHHHHHHHccCChhHCcCHHHHhhCH
Confidence 000000 011345688999999999999999999999874
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.9e-34 Score=322.96 Aligned_cols=305 Identities=26% Similarity=0.400 Sum_probs=148.5
Q ss_pred CCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCc
Q 037042 74 GNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLR 153 (1002)
Q Consensus 74 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 153 (1002)
..+++|++|++++|.++ .+| .+..+++|++|+|++|+++ .+|. +..+++|++|+|++|.+++ +| .+.++++|+
T Consensus 41 ~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~-~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~ 113 (347)
T 4fmz_A 41 EELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQIT-DISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLR 113 (347)
T ss_dssp HHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCS
T ss_pred hhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccc-cchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCC
Confidence 34555666666666665 333 2555666666666666665 2333 4556666666666666653 33 466666666
Q ss_pred eEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCc
Q 037042 154 ILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLN 233 (1002)
Q Consensus 154 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N 233 (1002)
+|+|++|++++ +|. +..+++|++|++++|.... .+..+..+++|++|++++|
T Consensus 114 ~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~--------------------------~~~~~~~l~~L~~L~l~~~ 165 (347)
T 4fmz_A 114 ELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLS--------------------------DLSPLSNMTGLNYLTVTES 165 (347)
T ss_dssp EEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCC--------------------------CCGGGTTCTTCCEEECCSS
T ss_pred EEECcCCcccC-chh-hccCCceeEEECCCCCCcc--------------------------cccchhhCCCCcEEEecCC
Confidence 66666666663 333 6666666666666664331 1223556666666666666
Q ss_pred ccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCc
Q 037042 234 KLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIP 313 (1002)
Q Consensus 234 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 313 (1002)
++++..+ +..+++|+.|++++|.+. +..+ +..+++|+.|++++|.+.+..+
T Consensus 166 ~~~~~~~--~~~l~~L~~L~l~~n~l~-------------------------~~~~--~~~l~~L~~L~l~~n~l~~~~~ 216 (347)
T 4fmz_A 166 KVKDVTP--IANLTDLYSLSLNYNQIE-------------------------DISP--LASLTSLHYFTAYVNQITDITP 216 (347)
T ss_dssp CCCCCGG--GGGCTTCSEEECTTSCCC-------------------------CCGG--GGGCTTCCEEECCSSCCCCCGG
T ss_pred CcCCchh--hccCCCCCEEEccCCccc-------------------------cccc--ccCCCccceeecccCCCCCCch
Confidence 6654332 444444444444444443 2111 3334444444444444443322
Q ss_pred cccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCc
Q 037042 314 STFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPE 393 (1002)
Q Consensus 314 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~ 393 (1002)
+..+++|++|+|++|+++.++. +..+++|++|++++|.++++ +
T Consensus 217 --~~~~~~L~~L~l~~n~l~~~~~-------~~~l~~L~~L~l~~n~l~~~----------------------------~ 259 (347)
T 4fmz_A 217 --VANMTRLNSLKIGNNKITDLSP-------LANLSQLTWLEIGTNQISDI----------------------------N 259 (347)
T ss_dssp --GGGCTTCCEEECCSSCCCCCGG-------GTTCTTCCEEECCSSCCCCC----------------------------G
T ss_pred --hhcCCcCCEEEccCCccCCCcc-------hhcCCCCCEEECCCCccCCC----------------------------h
Confidence 4444444444444444444331 33444444444444444322 1
Q ss_pred ccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccC
Q 037042 394 EIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473 (1002)
Q Consensus 394 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 473 (1002)
.+..+++|++|++++|++++. ..+..+++|+.|++++|++++..|..+..+++|+.|+|++|++++..| +..+++|
T Consensus 260 ~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 335 (347)
T 4fmz_A 260 AVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKM 335 (347)
T ss_dssp GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTC
T ss_pred hHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhcc
Confidence 223333344444444444322 224444444444444444444444444444444444444444444333 4444555
Q ss_pred cccccccccc
Q 037042 474 RNLSLASNEL 483 (1002)
Q Consensus 474 ~~L~L~~N~l 483 (1002)
+.|++++|.|
T Consensus 336 ~~L~l~~N~i 345 (347)
T 4fmz_A 336 DSADFANQVI 345 (347)
T ss_dssp SEESSSCC--
T ss_pred ceeehhhhcc
Confidence 5555555544
No 287
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.9e-34 Score=324.40 Aligned_cols=285 Identities=21% Similarity=0.357 Sum_probs=202.9
Q ss_pred ccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccc
Q 037042 292 IFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVG 371 (1002)
Q Consensus 292 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 371 (1002)
+..+++|++|+|++|+++++.+ |.++++|++|+|++|+++.++ .+.++++|++|++++|.+.++.+ +
T Consensus 62 ~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~~-------~~~~l~~L~~L~l~~n~i~~~~~---~- 128 (347)
T 4fmz_A 62 IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDIS-------ALQNLTNLRELYLNEDNISDISP---L- 128 (347)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG-------GGTTCTTCSEEECTTSCCCCCGG---G-
T ss_pred hhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCch-------HHcCCCcCCEEECcCCcccCchh---h-
Confidence 3344444444444444443322 444444444444444444432 13444445555555554444322 1
Q ss_pred cccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccE
Q 037042 372 NLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQ 451 (1002)
Q Consensus 372 ~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 451 (1002)
...++|+.|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.
T Consensus 129 ~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 203 (347)
T 4fmz_A 129 ANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHY 203 (347)
T ss_dssp TTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCE
T ss_pred ccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccce
Confidence 112345555555554443333 37888888888888888875544 7888889999999998885433 778888999
Q ss_pred EEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCcc
Q 037042 452 LDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNF 531 (1002)
Q Consensus 452 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 531 (1002)
|++++|.+.+..+ +..+++|+.|++++|++++..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|++
T Consensus 204 L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l 277 (347)
T 4fmz_A 204 FTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQI 277 (347)
T ss_dssp EECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCC
T ss_pred eecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCcc
Confidence 9999998886544 7888899999999999887654 88889999999999998864 4688899999999999999
Q ss_pred CccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCc
Q 037042 532 SGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604 (1002)
Q Consensus 532 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 604 (1002)
++. ..+..+++|+.|+|++|.+++..|..|+.+++|+.|+|++|++++..| +..+++|+.|++++|+++
T Consensus 278 ~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 278 SDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 875 468889999999999999998888889999999999999999997666 788999999999999886
No 288
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.8e-36 Score=359.03 Aligned_cols=268 Identities=22% Similarity=0.265 Sum_probs=197.4
Q ss_pred hcCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeecc-cchhHHHHHHHHHHHHhccCCCcceeeeEEecCch--hhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQ-CGRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDF--KALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~~ 780 (1002)
.++|++.+.||+|+||+||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++..... ....
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 36799999999999999999986 46899999998764 33446778999999999999999999998755110 1124
Q ss_pred HHHhhccCCCCChhHhhhccCC--cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCc---EEEeccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNY--ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMV---AHLSDFG 855 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~---~kl~DfG 855 (1002)
.++||||+++|+|.+++..... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 5799999999999999987543 5888899999999999999999 899999999999999986664 9999999
Q ss_pred ccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHh---h
Q 037042 856 ITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLL---I 932 (1002)
Q Consensus 856 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~---~ 932 (1002)
++........ .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..|...... .
T Consensus 170 ~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~----~~~~~~i~~~~~~ 242 (676)
T 3qa8_A 170 YAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP----VQWHGKVREKSNE 242 (676)
T ss_dssp CCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH----HHSSTTCC-----
T ss_pred cccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch----hhhhhhhhcccch
Confidence 9987654432 24467899999999999999999999999999999999999999653211 111100000 0
Q ss_pred --hhhhcccCccCChhh--hHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHH
Q 037042 933 --SIMKIVDGSLLSRED--IQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982 (1002)
Q Consensus 933 --~~~~i~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl 982 (1002)
.......+....... .........+..+.+++.+||.+||++|||+.|++
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 001111111100000 00001223567899999999999999999998844
No 289
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=6.4e-35 Score=317.85 Aligned_cols=235 Identities=12% Similarity=0.042 Sum_probs=185.8
Q ss_pred hcCCCCCceeeccCcceEEEEEeC-CCcEEEEEEeeccc---chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+ .
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~----~ 105 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA----G 105 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT----E
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC----c
Confidence 357999999999999999999865 58999999997653 234577899999999999999999999998766 4
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++... ....++.+++.||+.||+||| +++|+||||||+||+++.++.+||+++|
T Consensus 106 ~~lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~----- 174 (286)
T 3uqc_A 106 GLVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA----- 174 (286)
T ss_dssp EEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC-----
T ss_pred EEEEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc-----
Confidence 67999999999999999643 355678899999999999999 8999999999999999999999998543
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
|++| ++.++|||||||++|||++|+.||.......... ...+....
T Consensus 175 -----------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~----------~~~~~~~~ 220 (286)
T 3uqc_A 175 -----------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA----------PAERDTAG 220 (286)
T ss_dssp -----------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE----------ECCBCTTS
T ss_pred -----------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH----------HHHHHhcc
Confidence 4443 6889999999999999999999998643321100 00011111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhcccCC
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKINDLDF 993 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~~~~~ 993 (1002)
..... ......++..+.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 221 ~~~~~----~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 221 QPIEP----ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp CBCCH----HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred CCCCh----hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 11111 01123356779999999999999999 99999999999886554
No 290
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.6e-34 Score=317.73 Aligned_cols=239 Identities=18% Similarity=0.240 Sum_probs=182.5
Q ss_pred hcCCCCC-ceeeccCcceEEEEEe-CCCcEEEEEEeecccchhHHHHHHHHHHH-HhccCCCcceeeeEEecCchhhHHH
Q 037042 705 TDGFSEN-NLIGRGGFGSVYKARI-QDGMEVAVKVFNQQCGRAFKSFDVECEVM-KSIRHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 705 ~~~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.++|... +.||+|+||.||+|+. .+++.||||++... ..+.+|++++ +..+||||+++++++..........
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3567776 7899999999999986 47899999998643 4567888888 5568999999999987511111245
Q ss_pred HHhhccCCCCChhHhhhccCC-cCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCC---CCcEEEeccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNY-ILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGD---NMVAHLSDFGIT 857 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla 857 (1002)
++||||+++|+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 799999999999999987543 6899999999999999999999 899999999999999997 789999999998
Q ss_pred ccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhh-hh
Q 037042 858 KLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISI-MK 936 (1002)
Q Consensus 858 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~-~~ 936 (1002)
.... +..++.++||||+||++|||++|+.||........ .... ..
T Consensus 168 ~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~----------~~~~~~~ 213 (299)
T 3m2w_A 168 KETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI----------SPGMKTR 213 (299)
T ss_dssp EECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------------CCSCCS
T ss_pred cccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh----------hHHHHHH
Confidence 6432 23468899999999999999999999976422110 0000 01
Q ss_pred cccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHHHHHHhhc
Q 037042 937 IVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIVTRLLKIN 989 (1002)
Q Consensus 937 i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl~~L~~i~ 989 (1002)
+........ ......++..+.+++.+||+.+|++|||+.|+++|-+-..
T Consensus 214 ~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~ 262 (299)
T 3m2w_A 214 IRMGQYEFP----NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 262 (299)
T ss_dssp SCTTCCSSC----HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred HhhccccCC----chhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcc
Confidence 111111111 1111235677999999999999999999999999866433
No 291
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.8e-35 Score=337.13 Aligned_cols=244 Identities=15% Similarity=0.113 Sum_probs=179.8
Q ss_pred cCCCCCceeeccCcceEEEEEe-CCCcEEEEEEeeccc---chhHHHHHHHHHHHHhccC-CCccee---------eeEE
Q 037042 706 DGFSENNLIGRGGFGSVYKARI-QDGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIRH-RNIIKI---------ISCC 771 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv~~---------~~~~ 771 (1002)
..|...++||+|+||+||+|++ .+|+.||||++.... ....+.+.+|+.+++.++| +|.... ...+
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4577788999999999999984 479999999987432 2235778999999999987 322111 1111
Q ss_pred ecCchh-------------hHHHHHhhccCCCCChhHhhh------ccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcE
Q 037042 772 SIGDFK-------------ALFKALALEYMPHGSLEKYLY------SSNYILDIFQRLNIMIDVASALEYLYFGYSTPVI 832 (1002)
Q Consensus 772 ~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ii 832 (1002)
...... ....+++|++ .+++|.+++. ..+..+++..++.++.||++||+||| +++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 111100 0011344444 4679999884 22345788899999999999999999 89999
Q ss_pred EccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCccccccccc----------CCCCcCcccchHHHHHHH
Q 037042 833 HCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYG----------SEGRVSTNGDVYNFGVML 902 (1002)
Q Consensus 833 HrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwSlGv~l 902 (1002)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 9999999999999999999999999865432 244567 899999988 566689999999999999
Q ss_pred HHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCCHHHHH
Q 037042 903 METFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRINAKEIV 982 (1002)
Q Consensus 903 ~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~evl 982 (1002)
|||++|+.||........ ...+.... ..++..+.+++.+||+.+|++||++.|++
T Consensus 308 ~elltg~~Pf~~~~~~~~-------------~~~~~~~~------------~~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGG-------------SEWIFRSC------------KNIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHHSSCCCCTTGGGSC-------------SGGGGSSC------------CCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHHCCCCCCCcchhhh-------------HHHHHhhc------------ccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 999999999976432211 11111110 11235689999999999999999988887
Q ss_pred HH
Q 037042 983 TR 984 (1002)
Q Consensus 983 ~~ 984 (1002)
++
T Consensus 363 ~~ 364 (413)
T 3dzo_A 363 ET 364 (413)
T ss_dssp TS
T ss_pred hC
Confidence 65
No 292
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-34 Score=354.18 Aligned_cols=243 Identities=21% Similarity=0.290 Sum_probs=192.9
Q ss_pred hcCCCCCceeeccCcceEEEEEeC--CCcEEEEEEeeccc-chhHHHHHHHHHHHHhccCCCcceeeeEEecCchhh-HH
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQ--DGMEVAVKVFNQQC-GRAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKA-LF 780 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-~~ 780 (1002)
.++|++.+.||+|+||+||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++...+... ..
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 367999999999999999999865 68999999986543 344567889999999999999999999998765211 11
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++++|.+++.. .+++..++.++.||++||+||| +++|+||||||+|||++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 4799999999999988755 4899999999999999999999 8999999999999999885 9999999999876
Q ss_pred cCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccC
Q 037042 861 TREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDG 940 (1002)
Q Consensus 861 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 940 (1002)
... ....||+.|+|||++.++ ++.++|||||||++|||++|..||........
T Consensus 232 ~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-------------------- 284 (681)
T 2pzi_A 232 NSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL-------------------- 284 (681)
T ss_dssp TCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC--------------------
T ss_pred ccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc--------------------
Confidence 543 345689999999987664 48999999999999999999988765322111
Q ss_pred ccCChhhhHHHhHHHHHHHHHHHHhHccccCCCCCCC-HHHHHHHHHhh
Q 037042 941 SLLSREDIQFVAKEQCMSFVFNMAMECTVESPEKRIN-AKEIVTRLLKI 988 (1002)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-~~evl~~L~~i 988 (1002)
.... .....+..+.+++.+||+++|++||+ ++++.+.+..+
T Consensus 285 --~~~~-----~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 285 --PEDD-----PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp --CTTC-----HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred --cccc-----cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 0000 01123467889999999999999996 55555555544
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=5.9e-33 Score=309.96 Aligned_cols=197 Identities=23% Similarity=0.308 Sum_probs=100.8
Q ss_pred CCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEc
Q 037042 78 SLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRL 157 (1002)
Q Consensus 78 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 157 (1002)
+|+.+++++|.++ .+|..+. ++|++|+|++|++. .++...+.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDIS-ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCC-ccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 4666666666665 5555443 45666666666655 333333455566666666666665555555566666666666
Q ss_pred ccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCccccc
Q 037042 158 SYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG 237 (1002)
Q Consensus 158 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~ 237 (1002)
++|+++ .+|..+. ++|++|++++|++++. .+..++++++|++|++++|+++.
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~-------------------------~~~~~~~l~~L~~L~l~~n~l~~ 161 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIRKV-------------------------PKGVFSGLRNMNCIEMGGNPLEN 161 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCCCC-------------------------CSGGGSSCSSCCEEECCSCCCBG
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccCcc-------------------------CHhHhCCCccCCEEECCCCcccc
Confidence 666555 4444433 4555555555555421 12234555555555555555532
Q ss_pred --ccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccc
Q 037042 238 --VIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPST 315 (1002)
Q Consensus 238 --~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 315 (1002)
..|..+..+ +|++|++++|++++ +|..+. ++|++|+|++|++++..+..
T Consensus 162 ~~~~~~~~~~l--------------------------~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~ 212 (332)
T 2ft3_A 162 SGFEPGAFDGL--------------------------KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELED 212 (332)
T ss_dssp GGSCTTSSCSC--------------------------CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTS
T ss_pred CCCCcccccCC--------------------------ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHH
Confidence 333333333 44444444444442 232222 34555555555555544444
Q ss_pred cccccccchhccccccCccc
Q 037042 316 FGNLRNLKRLGLNNNHLTSL 335 (1002)
Q Consensus 316 ~~~l~~L~~L~L~~N~l~~l 335 (1002)
|.++++|++|+|++|+++.+
T Consensus 213 l~~l~~L~~L~L~~N~l~~~ 232 (332)
T 2ft3_A 213 LLRYSKLYRLGLGHNQIRMI 232 (332)
T ss_dssp STTCTTCSCCBCCSSCCCCC
T ss_pred hcCCCCCCEEECCCCcCCcC
Confidence 55555555544444444443
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.2e-32 Score=307.38 Aligned_cols=268 Identities=23% Similarity=0.307 Sum_probs=136.1
Q ss_pred CCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccc
Q 037042 296 SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSH 375 (1002)
Q Consensus 296 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 375 (1002)
++|++|+|++|+|+++.|..|.++++|++|+|++|+++.++.. .|.++++|++|+|++|.+..+... ..+
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~L~L~~n~l~~l~~~-----~~~ 123 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEK-----AFSPLRKLQKLYISKNHLVEIPPN-----LPS 123 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGG-----GSTTCTTCCEEECCSSCCCSCCSS-----CCT
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHh-----HhhCcCCCCEEECCCCcCCccCcc-----ccc
Confidence 3455555555555555455555555555555555555554321 245555555555555555433211 013
Q ss_pred cccEEecCCCCCCCCCCcccCCCCCccEEEccCCccC--ccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEE
Q 037042 376 SLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLN--GSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLD 453 (1002)
Q Consensus 376 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 453 (1002)
+|++|++++|++++..+..|..+++|+.|++++|.++ +..|..+..+ +|+.|++++|++++ +|..+. ++|+.|+
T Consensus 124 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~ 199 (332)
T 2ft3_A 124 SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELH 199 (332)
T ss_dssp TCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCB
T ss_pred cCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEE
Confidence 4555555555555444455666666666666666664 2445555555 55666666665553 333322 3444555
Q ss_pred ccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCc
Q 037042 454 LSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSG 533 (1002)
Q Consensus 454 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 533 (1002)
|++|++++..+..|..+++|+.|+|++|++.+..+. .+..+++|+.|+|++|+++
T Consensus 200 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~------------------------~~~~l~~L~~L~L~~N~l~- 254 (332)
T 2ft3_A 200 LDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENG------------------------SLSFLPTLRELHLDNNKLS- 254 (332)
T ss_dssp CCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTT------------------------GGGGCTTCCEEECCSSCCC-
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChh------------------------HhhCCCCCCEEECCCCcCe-
Confidence 555555444444444444444444444444444444 4444455555555555554
Q ss_pred cCcccccCCccccEEEccCeeecccCCccccc------ccccceecccccccc--CCCcccccCCCccceeeCCCCc
Q 037042 534 VIPNAIGGIKDLQFLFLEYNILQGSIPDSFGD------LMSLKSLNLSNNNLS--GSIPVSLEKLSYLKDLNLSFNK 602 (1002)
Q Consensus 534 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~ 602 (1002)
.+|..+..+++|+.|+|++|+|++..+..|.. ...|+.|++++|.+. +..|..|..+++|+.++|++|+
T Consensus 255 ~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 255 RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 33444555555555555555555444444433 244566666666655 4555566666666666666653
No 295
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.4e-34 Score=323.82 Aligned_cols=249 Identities=16% Similarity=0.148 Sum_probs=185.7
Q ss_pred hcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeeccc--------chhHHHHHHHHHHHHhcc---------CCCccee
Q 037042 705 TDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQC--------GRAFKSFDVECEVMKSIR---------HRNIIKI 767 (1002)
Q Consensus 705 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~~ 767 (1002)
.++|+..+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|++++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688999999999999999987 68999999997542 223477889999999886 7777776
Q ss_pred eeEEecCch--------------------------hhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHH
Q 037042 768 ISCCSIGDF--------------------------KALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALE 821 (1002)
Q Consensus 768 ~~~~~~~~~--------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~ 821 (1002)
.+++...+. .....++||||+++|++.+.+.+ ..+++..++.++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 665421100 01245799999999987777644 34899999999999999999
Q ss_pred HHHcCCCCCcEEccCCCCCeeeCCCC--------------------cEEEecccccccccCCCceeeeccCCCCcccccc
Q 037042 822 YLYFGYSTPVIHCDLKPSNVLLGDNM--------------------VAHLSDFGITKLLTREDQFVTQTQTPATIGYMAL 881 (1002)
Q Consensus 822 ~LH~~~~~~iiHrDlkp~NILl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aP 881 (1002)
|||+ +++|+||||||+|||++.++ .+||+|||+|+..... ...||+.||||
T Consensus 176 ~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMDE 246 (336)
T ss_dssp HHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTCS
T ss_pred HHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccCh
Confidence 9993 47899999999999999887 9999999999876532 23689999999
Q ss_pred cccCCCCcCcccchHHHHHH-HHHHHhCCCCCcccccccccHHHHHHHHHhhhhhhcccCccCChhhhHHHhHHHHHHHH
Q 037042 882 EYGSEGRVSTNGDVYNFGVM-LMETFTGKKPTNEIFNEGMTLKHWVNDWLLISIMKIVDGSLLSREDIQFVAKEQCMSFV 960 (1002)
Q Consensus 882 E~~~~~~~~~~~DvwSlGv~-l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l 960 (1002)
|++.+.. +.++||||+|++ .+++++|..||... .|.......-...+...... .......++..+
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~ 312 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWLHYLTDKMLKQMTFKTKC-----NTPAMKQIKRKI 312 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHHHHHHHHHHHTCCCSSCC-----CSHHHHHHHHHH
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcch--------hhhhHHHHhhhhhhccCccc-----chhhhhhcCHHH
Confidence 9988766 899999998877 77888999998541 12111111101111111100 111234577889
Q ss_pred HHHHhHccccCCCCCCCHHHHH-HH
Q 037042 961 FNMAMECTVESPEKRINAKEIV-TR 984 (1002)
Q Consensus 961 ~~li~~cl~~~P~~Rpt~~evl-~~ 984 (1002)
.+++.+||+++ |++|++ +|
T Consensus 313 ~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHhccC-----CHHHHHhcC
Confidence 99999999976 999999 76
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.9e-32 Score=305.68 Aligned_cols=288 Identities=22% Similarity=0.246 Sum_probs=170.5
Q ss_pred ccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhcc
Q 037042 248 TIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGL 327 (1002)
Q Consensus 248 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 327 (1002)
+++.++++++.++..... -.++|++|+|++|++++..+..|.++++|++|+|++|+++++.|..|+++++|++|+|
T Consensus 32 ~l~~l~~~~~~l~~lp~~----~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLEKVPKD----LPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCCSCCCS----CCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCccccCcc----CCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 566666666655422111 1245555555555555544445555555555555555555555555555555555555
Q ss_pred ccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEcc
Q 037042 328 NNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLG 407 (1002)
Q Consensus 328 ~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 407 (1002)
++|+++.+|..+ .++|+.|++++|++++..+..|.++++|+.|+++
T Consensus 108 s~n~l~~l~~~~----------------------------------~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 153 (330)
T 1xku_A 108 SKNQLKELPEKM----------------------------------PKTLQELRVHENEITKVRKSVFNGLNQMIVVELG 153 (330)
T ss_dssp CSSCCSBCCSSC----------------------------------CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECC
T ss_pred CCCcCCccChhh----------------------------------cccccEEECCCCcccccCHhHhcCCccccEEECC
Confidence 555555443221 1345555666666665556667778888888888
Q ss_pred CCccCc--cCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccc
Q 037042 408 GNNLNG--SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELIS 485 (1002)
Q Consensus 408 ~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 485 (1002)
+|.+.. ..+..|.++++|++|++++|.++. +|..+. ++|+.|+|++|++++..|..|..+++|+.|+|++|++++
T Consensus 154 ~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 230 (330)
T 1xku_A 154 TNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230 (330)
T ss_dssp SSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE
T ss_pred CCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce
Confidence 887753 666777777888888888887773 444433 567777777777776666777777777777777777776
Q ss_pred cCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCC------ccccEEEccCeeecc--
Q 037042 486 VIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGI------KDLQFLFLEYNILQG-- 557 (1002)
Q Consensus 486 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~~-- 557 (1002)
..+..|..+++|++|++++|+++ .+|..+..+++|++|++++|+|+++.+..|... ..|+.|++++|.+..
T Consensus 231 ~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~ 309 (330)
T 1xku_A 231 VDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWE 309 (330)
T ss_dssp ECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGG
T ss_pred eChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccc
Confidence 66666667777777777777766 455566666666666666666666555555432 344445555554432
Q ss_pred cCCcccccccccceeccccc
Q 037042 558 SIPDSFGDLMSLKSLNLSNN 577 (1002)
Q Consensus 558 ~~p~~~~~l~~L~~L~Ls~N 577 (1002)
..|..|..+.+|+.++|++|
T Consensus 310 i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 310 IQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp SCGGGGTTCCCGGGEEC---
T ss_pred cCccccccccceeEEEeccc
Confidence 23344444444444444444
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.8e-32 Score=304.24 Aligned_cols=103 Identities=23% Similarity=0.288 Sum_probs=49.9
Q ss_pred CCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEc
Q 037042 78 SLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRL 157 (1002)
Q Consensus 78 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 157 (1002)
+|+.++++++.++ .+|..+. ++|++|+|++|+++ .+|...+.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCC-EeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 4556666666555 4444432 34555555555554 233333344555555555555555444445555555555555
Q ss_pred ccccCCCCCccccccccccceeeecccccc
Q 037042 158 SYNDFAGGIPKEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 158 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
++|+++ .+|..+. ++|++|++++|+++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~ 134 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEIT 134 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCccc
Confidence 555544 3333332 34445555444444
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=1.7e-35 Score=346.76 Aligned_cols=365 Identities=18% Similarity=0.178 Sum_probs=213.4
Q ss_pred CcEEEEEeCCCCCccccCcc-cCCCCCCCEEEcccCCCCC----CCCcccccccCCcEEEecccccccccCcccCCCCC-
Q 037042 53 HRVTALNISHLSLSGTIPSR-LGNLSSLQSLFLHSNQFSG----SIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLP- 126 (1002)
Q Consensus 53 ~~v~~L~l~~~~l~~~~p~~-l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~- 126 (1002)
.+++.|||++++++...... +..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+.+..+..++..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 36889999999987654443 7888999999999999874 35677788899999999999887655555555555
Q ss_pred ---CCCEEeCCCCcccc----cCCccccCCCCCceEEcccccCCCCCccccc-----cccccceeeeccccccccccchh
Q 037042 127 ---FFESLNLSKNMFHG----GIPSALSNCTYLRILRLSYNDFAGGIPKEIG-----NLTKLEELYLSFNGLQGAYDHGF 194 (1002)
Q Consensus 127 ---~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~~~~~~ 194 (1002)
+|++|+|++|+++. .+|..+.++++|++|+|++|.+++..+..+. ..++|++|+|++|++++....
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~-- 160 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE-- 160 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH--
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH--
Confidence 68888888888883 5677888888888888888888754444332 245788888888887752111
Q ss_pred hHHhhhchhhcccCCcccCCCCccccCccccceeeccCccccccccccccc-ccccceeecccCCCccccCCccccCCCc
Q 037042 195 LQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFN-MSTIQGVGLQNNSLSGSLQSIPYVRLPN 273 (1002)
Q Consensus 195 ~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~l~~ 273 (1002)
.++..+..+++|++|++++|++++..+..+.. +. ...++
T Consensus 161 -------------------~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~---------------------~~~~~ 200 (461)
T 1z7x_W 161 -------------------PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK---------------------DSPCQ 200 (461)
T ss_dssp -------------------HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHH---------------------HSCCC
T ss_pred -------------------HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHh---------------------cCCCC
Confidence 23455666778888888888876544443332 00 01234
Q ss_pred cchhhccccccccc----ccccccccCCCCeeecCCCccCCCC-----ccccccccccchhccccccCccchhhhhhhcc
Q 037042 274 LEELYLWGNHFSGS----IPNFIFNASKLSRLELQKNSFSGFI-----PSTFGNLRNLKRLGLNNNHLTSLTLELSFLSS 344 (1002)
Q Consensus 274 L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~ 344 (1002)
|++|+|++|++++. ++..+..+++|++|+|++|.+++.. +..+..+++|++|+|++|+++..... .+...
T Consensus 201 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~-~l~~~ 279 (461)
T 1z7x_W 201 LEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG-DLCRV 279 (461)
T ss_dssp CCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHH-HHHHH
T ss_pred ceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHH-HHHHH
Confidence 44555555555432 3455556666777777776665432 22233466677777777766653211 01123
Q ss_pred cCCCCCCcEEeCCCCCCCCcccccccc---cccccccEEecCCCCCCCC----CCcccCCCCCccEEEccCCccCccCCc
Q 037042 345 LSNCKYLEFIDLSSNSIDGILSRKSVG---NLSHSLKIFDMSDCNVSGS----IPEEIGNLTNLIGFYLGGNNLNGSIPI 417 (1002)
Q Consensus 345 l~~l~~L~~L~Ls~N~l~~~~~~~~~~---~~~~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~ 417 (1002)
+..+++|++|+|++|.+.......... ...++|+.|++++|.+++. ++..+..+++|++|+|++|++++..+.
T Consensus 280 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 280 LRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp HHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred HhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHH
Confidence 455666777777776664321111000 0112444444444444432 233344445555555555555433332
Q ss_pred cccC-----CCCCCEEEccCCcccc----cCCccccCCccccEEEccCCcCC
Q 037042 418 TLGK-----LQKLQVLYFPDNKLEG----SIPDEVCRLAKVYQLDLSNNKLS 460 (1002)
Q Consensus 418 ~~~~-----l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 460 (1002)
.+.. .++|++|+|++|.+++ .+|..+..+++|++|+|++|+++
T Consensus 360 ~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 360 ELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 2221 3444444554444443 33444444444444444444444
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=3.2e-35 Score=344.47 Aligned_cols=387 Identities=19% Similarity=0.153 Sum_probs=223.5
Q ss_pred ccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccc----cccccccccc
Q 037042 173 LTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGV----IPAEIFNMST 248 (1002)
Q Consensus 173 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~ 248 (1002)
+++|++|+|++|+++... +...+..+++|++|+|++|++++. ++..+..+++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~------------------------~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~ 57 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDAR------------------------WAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPA 57 (461)
T ss_dssp CEEEEEEEEESCCCCHHH------------------------HHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTT
T ss_pred CccceehhhhhcccCchh------------------------HHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCC
Confidence 357888999988887421 122356678899999999988753 4566667778
Q ss_pred cceeecccCCCccccCCccccCCC----ccchhhcccccccc----cccccccccCCCCeeecCCCccCCCCcccccc--
Q 037042 249 IQGVGLQNNSLSGSLQSIPYVRLP----NLEELYLWGNHFSG----SIPNFIFNASKLSRLELQKNSFSGFIPSTFGN-- 318 (1002)
Q Consensus 249 L~~L~L~~N~l~~~~~~~~~~~l~----~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-- 318 (1002)
|++|+|++|++.......-+..++ +|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+..
T Consensus 58 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l 137 (461)
T 1z7x_W 58 LAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGL 137 (461)
T ss_dssp CCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHH
T ss_pred cCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHH
Confidence 888888888775321111112233 57777777777663 44666666777777777777766544433322
Q ss_pred ---ccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCccc
Q 037042 319 ---LRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEI 395 (1002)
Q Consensus 319 ---l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~ 395 (1002)
.++|++|+|++|+++..... .+...+..+++|++|++++|.+...........+.
T Consensus 138 ~~~~~~L~~L~L~~n~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~--------------------- 195 (461)
T 1z7x_W 138 LDPQCRLEKLQLEYCSLSAASCE-PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK--------------------- 195 (461)
T ss_dssp TSTTCCCCEEECTTSCCBGGGHH-HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHH---------------------
T ss_pred hcCCCcceEEECCCCCCCHHHHH-HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHh---------------------
Confidence 34566777777666653321 11223445566666666666654321111000000
Q ss_pred CCCCCccEEEccCCccCcc----CCccccCCCCCCEEEccCCcccccC-----CccccCCccccEEEccCCcCCcc----
Q 037042 396 GNLTNLIGFYLGGNNLNGS----IPITLGKLQKLQVLYFPDNKLEGSI-----PDEVCRLAKVYQLDLSNNKLSGS---- 462 (1002)
Q Consensus 396 ~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~---- 462 (1002)
...++|++|+|++|++++. ++..+..+++|++|++++|.+++.. +..+..+++|++|+|++|.++..
T Consensus 196 ~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 275 (461)
T 1z7x_W 196 DSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGD 275 (461)
T ss_dssp HSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHH
T ss_pred cCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHH
Confidence 0233555555555555532 3444555556666666666555321 12222455666666666666543
Q ss_pred CCccccCCccCcccccccccccccCCcccccc-----ccCceeeccCCCCCCC----CcccccccccceeeeCCCCccCc
Q 037042 463 IPACFGDLASLRNLSLASNELISVIPSTFWNL-----KDILYLNLSSNSLTGP----LPLEIGNLKVLVKIDFSMNNFSG 533 (1002)
Q Consensus 463 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~ 533 (1002)
++..+..+++|++|++++|.+.+..+..+... ++|++|++++|.+++. ++..+..+++|+.|++++|.+++
T Consensus 276 l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 355 (461)
T 1z7x_W 276 LCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLED 355 (461)
T ss_dssp HHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHH
T ss_pred HHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccc
Confidence 34455556666666666666654433333332 4677777777776653 34455566777777777777765
Q ss_pred cCcccccC-----CccccEEEccCeeecc----cCCcccccccccceeccccccccCCCccccc-----CCCccceeeCC
Q 037042 534 VIPNAIGG-----IKDLQFLFLEYNILQG----SIPDSFGDLMSLKSLNLSNNNLSGSIPVSLE-----KLSYLKDLNLS 599 (1002)
Q Consensus 534 ~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls 599 (1002)
..+..+.. .++|+.|+|++|.+++ .+|..+..+++|+.|+|++|++++.-...+. ...+|+.|++.
T Consensus 356 ~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~ 435 (461)
T 1z7x_W 356 AGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLY 435 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred ccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeec
Confidence 54444432 5677778888887775 5677777777788888888877643111111 13356666666
Q ss_pred CCcCcc
Q 037042 600 FNKLEG 605 (1002)
Q Consensus 600 ~N~l~~ 605 (1002)
+|.+..
T Consensus 436 ~~~~~~ 441 (461)
T 1z7x_W 436 DIYWSE 441 (461)
T ss_dssp TCCCCH
T ss_pred ccccCH
Confidence 666554
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=7.9e-32 Score=303.58 Aligned_cols=287 Identities=21% Similarity=0.191 Sum_probs=215.7
Q ss_pred CCCCCCCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccc
Q 037042 33 NWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQ 112 (1002)
Q Consensus 33 ~w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 112 (1002)
.|.....+|.|.|+ ||. ++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 22 ~~~~~~~~C~~~~~-c~~----------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 87 (353)
T 2z80_A 22 SSNQASLSCDRNGI-CKG----------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG 87 (353)
T ss_dssp -----CCEECTTSE-EEC----------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCCccCCCCCCCeE-eeC----------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCc
Confidence 46667788999998 865 456666 6677665 488899999998886666688888899999999988
Q ss_pred cccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCc-cccccccccceeeecccc-ccccc
Q 037042 113 LSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIP-KEIGNLTKLEELYLSFNG-LQGAY 190 (1002)
Q Consensus 113 l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~-l~~~~ 190 (1002)
+++ ++...|.++++|++|+|++|++++..+..|+++++|++|+|++|++++..+ ..|.++++|++|++++|. +++
T Consensus 88 l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~-- 164 (353)
T 2z80_A 88 INT-IEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTK-- 164 (353)
T ss_dssp CCE-ECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCE--
T ss_pred cCc-cCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccc--
Confidence 884 444555778889999999998886555568888899999999998884333 378888899999998884 542
Q ss_pred cchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccC
Q 037042 191 DHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVR 270 (1002)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 270 (1002)
..|..++++++|++|++++|++++..|..+..+++|++|++++|++. .++...+..
T Consensus 165 -----------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~ 220 (353)
T 2z80_A 165 -----------------------IQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDV 220 (353)
T ss_dssp -----------------------ECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHH
T ss_pred -----------------------cCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhh
Confidence 23566788888889999988888888888888888888888888875 333334455
Q ss_pred CCccchhhccccccccccccccc---ccCCCCeeecCCCccCC----CCccccccccccchhccccccCccchhhhhhhc
Q 037042 271 LPNLEELYLWGNHFSGSIPNFIF---NASKLSRLELQKNSFSG----FIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLS 343 (1002)
Q Consensus 271 l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~ 343 (1002)
+++|++|+|++|++++..+..+. ....++.++|++|.+++ .+|..|.++++|++|+|++|+++.+|..+
T Consensus 221 ~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~---- 296 (353)
T 2z80_A 221 TSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGI---- 296 (353)
T ss_dssp TTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTT----
T ss_pred cccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHH----
Confidence 78888888888888876554433 35667788888888775 35777888888888888888888887643
Q ss_pred ccCCCCCCcEEeCCCCCCCCcc
Q 037042 344 SLSNCKYLEFIDLSSNSIDGIL 365 (1002)
Q Consensus 344 ~l~~l~~L~~L~Ls~N~l~~~~ 365 (1002)
|..+++|++|+|++|.+.+..
T Consensus 297 -~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 297 -FDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp -TTTCTTCCEEECCSSCBCCCH
T ss_pred -HhcCCCCCEEEeeCCCccCcC
Confidence 577888888888888877643
No 301
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.97 E-value=2.2e-32 Score=302.19 Aligned_cols=268 Identities=21% Similarity=0.211 Sum_probs=166.6
Q ss_pred CCCCCCCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCC-CCCCCcccc-------cccCCc
Q 037042 33 NWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQF-SGSIPFSIF-------NIHTLK 104 (1002)
Q Consensus 33 ~w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l-~~~~p~~~~-------~l~~L~ 104 (1002)
+|.....|+.|..+.......+++.|++++|.+ .+|..+... |+.|+|++|++ .+.+|..+. ++++|+
T Consensus 23 ~~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~ 98 (312)
T 1wwl_A 23 DWSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQ 98 (312)
T ss_dssp CGGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCC
T ss_pred chHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCcc
Confidence 576666666666654443334577777778877 677766654 77778888887 445666665 677888
Q ss_pred EEEecccccccccCcccC-CCCCCCCEEeCCCCcccccCCccccCC-----CCCceEEcccccCCCCCccccccccccce
Q 037042 105 LLSFGDNQLSGEIPTNIC-SNLPFFESLNLSKNMFHGGIPSALSNC-----TYLRILRLSYNDFAGGIPKEIGNLTKLEE 178 (1002)
Q Consensus 105 ~L~L~~N~l~~~ip~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 178 (1002)
+|+|++|++++.+|..+| ..+++|++|+|++|++++. |..++++ ++|++|+|++|++++..|..|+++++|++
T Consensus 99 ~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 177 (312)
T 1wwl_A 99 ELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALST 177 (312)
T ss_dssp EEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCE
T ss_pred EEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCE
Confidence 888888888877777764 6778888888888888765 7777776 77888888888887766677888888888
Q ss_pred eeeccccccccccchhhHHhhhchhhcccCCcccCCCCccc--cCccccceeeccCcccccc--cc-cccccccccceee
Q 037042 179 LYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEI--GNLRNLEVLALGLNKLVGV--IP-AEIFNMSTIQGVG 253 (1002)
Q Consensus 179 L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l--~~l~~L~~L~L~~N~l~~~--~p-~~~~~l~~L~~L~ 253 (1002)
|+|++|++.+.. .+|..+ +.+++|++|+|++|++++. ++ ..+.++++|+.|+
T Consensus 178 L~Ls~N~l~~~~-----------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~ 234 (312)
T 1wwl_A 178 LDLSDNPELGER-----------------------GLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLD 234 (312)
T ss_dssp EECCSCTTCHHH-----------------------HHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEE
T ss_pred EECCCCCcCcch-----------------------HHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEE
Confidence 888888765421 122233 6677777777777777632 12 2233455566666
Q ss_pred cccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCc
Q 037042 254 LQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLT 333 (1002)
Q Consensus 254 L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 333 (1002)
|++|++++.++...+..+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|++|+|++|+++
T Consensus 235 Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 235 LSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred CCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 66665554433223333445555555555554 3344333 4445555555555443 32 444444444444444443
No 302
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=3.4e-33 Score=338.18 Aligned_cols=466 Identities=15% Similarity=0.105 Sum_probs=240.7
Q ss_pred CCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCC---CCCCCcccc------------cccCC
Q 037042 39 SFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQF---SGSIPFSIF------------NIHTL 103 (1002)
Q Consensus 39 ~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l---~~~~p~~~~------------~l~~L 103 (1002)
-|++|.++.+... ..+.+. +.+...++..+..+++|++|+|+++.. .+.+|..++ .+++|
T Consensus 40 vck~W~~~~~~~~----~~l~~~-~~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L 114 (592)
T 3ogk_B 40 VCRRWFKIDSETR----EHVTMA-LCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQL 114 (592)
T ss_dssp SCHHHHHHHHHHC----CEEEES-CGGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HhHHHHHhhhccc----cEEEEe-eccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCC
Confidence 3458999965432 233333 233444455677899999999988532 245554444 67889
Q ss_pred cEEEecccccccccCcccCCCCCC-CCEEeCCCCc-ccc-cCCccccCCCCCceEEcccccCCCC----Ccccccccccc
Q 037042 104 KLLSFGDNQLSGEIPTNICSNLPF-FESLNLSKNM-FHG-GIPSALSNCTYLRILRLSYNDFAGG----IPKEIGNLTKL 176 (1002)
Q Consensus 104 ~~L~L~~N~l~~~ip~~~~~~l~~-L~~L~Ls~N~-l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L 176 (1002)
++|+|++|.+++..+..+...++. |++|+|++|. ++. .++..+.++++|++|+|++|.+++. ++..+.++++|
T Consensus 115 ~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L 194 (592)
T 3ogk_B 115 KSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSL 194 (592)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCC
T ss_pred CeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCc
Confidence 999999998876655554332444 8999998886 321 2333445788899999999988765 44455677889
Q ss_pred ceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeeccc
Q 037042 177 EELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQN 256 (1002)
Q Consensus 177 ~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 256 (1002)
++|+|++|.+++.... .++..+.++++|++|++++|.+.+ +|..+..+++|+.|+++.
T Consensus 195 ~~L~L~~n~~~~~~~~---------------------~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 195 EVLNFYMTEFAKISPK---------------------DLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CEEECTTCCCSSCCHH---------------------HHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred cEEEeeccCCCccCHH---------------------HHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 9999998888743211 234455677889999999988886 567788888888888876
Q ss_pred CCCccc--cCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCc-cccccccccchhccccccCc
Q 037042 257 NSLSGS--LQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIP-STFGNLRNLKRLGLNNNHLT 333 (1002)
Q Consensus 257 N~l~~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 333 (1002)
+..... .....+..+++|+.|+++++... .+|..+..+++|++|+|++|.+++... ..+..+++|++|+|+ |.+.
T Consensus 253 ~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~ 330 (592)
T 3ogk_B 253 LNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIG 330 (592)
T ss_dssp CCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGH
T ss_pred cccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccC
Confidence 332200 00112233444555555443222 344444444455555555544432222 123444444444444 2222
Q ss_pred cchhhhhhhcccCCCCCCcEEeCCC---CCCCCcccccccccccccccEEecCCCCCCCC-CCcccCCCCCccEEEccCC
Q 037042 334 SLTLELSFLSSLSNCKYLEFIDLSS---NSIDGILSRKSVGNLSHSLKIFDMSDCNVSGS-IPEEIGNLTNLIGFYLGGN 409 (1002)
Q Consensus 334 ~l~~~~~~~~~l~~l~~L~~L~Ls~---N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N 409 (1002)
..... ..+..+++|++|+|++ +..... ..|.+++. ++..+..+++|++|+++.|
T Consensus 331 ~~~l~----~~~~~~~~L~~L~L~~g~~~~~~~~------------------~~~~~~~~~~~~l~~~~~~L~~L~l~~~ 388 (592)
T 3ogk_B 331 DRGLE----VLAQYCKQLKRLRIERGADEQGMED------------------EEGLVSQRGLIALAQGCQELEYMAVYVS 388 (592)
T ss_dssp HHHHH----HHHHHCTTCCEEEEECCCCSSTTSS------------------TTCCCCHHHHHHHHHHCTTCSEEEEEES
T ss_pred HHHHH----HHHHhCCCCCEEEeecCcccccccc------------------ccCccCHHHHHHHHhhCccCeEEEeecC
Confidence 11000 0112233344444431 000000 01122111 1111223344444444444
Q ss_pred ccCccCCccccC-CCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCcc-----CCccccCCccCcccccccc--
Q 037042 410 NLNGSIPITLGK-LQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGS-----IPACFGDLASLRNLSLASN-- 481 (1002)
Q Consensus 410 ~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~L~~N-- 481 (1002)
++++..+..+.. +++|+.|+++++. ..|.+++. ++..+..+++|+.|++++|
T Consensus 389 ~l~~~~~~~l~~~~~~L~~L~l~~~~--------------------~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~ 448 (592)
T 3ogk_B 389 DITNESLESIGTYLKNLCDFRLVLLD--------------------REERITDLPLDNGVRSLLIGCKKLRRFAFYLRQG 448 (592)
T ss_dssp CCCHHHHHHHHHHCCSCCEEEEEECS--------------------CCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGG
T ss_pred CccHHHHHHHHhhCCCCcEEEEeecC--------------------CCccccCchHHHHHHHHHHhCCCCCEEEEecCCC
Confidence 444333333332 4444444443000 13334321 2222344555555555432
Q ss_pred cccccCCccccc-cccCceeeccCCCCCC-CCcccccccccceeeeCCCCccCcc-CcccccCCccccEEEccCeeeccc
Q 037042 482 ELISVIPSTFWN-LKDILYLNLSSNSLTG-PLPLEIGNLKVLVKIDFSMNNFSGV-IPNAIGGIKDLQFLFLEYNILQGS 558 (1002)
Q Consensus 482 ~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~ 558 (1002)
.+++..+..+.. +++|++|++++|++++ .++..+.++++|+.|++++|.|++. ++..+..+++|++|+|++|++++.
T Consensus 449 ~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 449 GLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp GCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred CccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 233332333322 5566666666666654 2233345566666666666666543 233344566777777777776654
Q ss_pred CCcccc-cccccceeccc
Q 037042 559 IPDSFG-DLMSLKSLNLS 575 (1002)
Q Consensus 559 ~p~~~~-~l~~L~~L~Ls 575 (1002)
....+. .++.+....+.
T Consensus 529 ~~~~l~~~~p~l~~~~~~ 546 (592)
T 3ogk_B 529 GQDLMQMARPYWNIELIP 546 (592)
T ss_dssp CTTGGGGCCTTEEEEEEC
T ss_pred HHHHHHHhCCCcEEEEec
Confidence 332222 34444444443
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=3.2e-30 Score=284.37 Aligned_cols=254 Identities=20% Similarity=0.220 Sum_probs=154.8
Q ss_pred CCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEeccccccc--
Q 037042 38 ISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSG-- 115 (1002)
Q Consensus 38 ~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-- 115 (1002)
...|.|++|.|+. ++++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+++.
T Consensus 4 ~C~C~~~~l~c~~------------~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 68 (306)
T 2z66_A 4 RCSCSGTEIRCNS------------KGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG 68 (306)
T ss_dssp TCEEETTEEECCS------------SCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEE
T ss_pred CCeeCCCEEEcCC------------CCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCccc
Confidence 3447888888764 3344 5566543 688899999998884333446788888888888888762
Q ss_pred ccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCc-cccccccccceeeeccccccccccchh
Q 037042 116 EIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIP-KEIGNLTKLEELYLSFNGLQGAYDHGF 194 (1002)
Q Consensus 116 ~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 194 (1002)
.+|..++ .+++|++|+|++|.++ .+|..+.++++|++|+|++|++++..+ ..+.++++|++|++++|.+++
T Consensus 69 ~~~~~~~-~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~------ 140 (306)
T 2z66_A 69 CCSQSDF-GTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV------ 140 (306)
T ss_dssp EEEHHHH-SCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEE------
T ss_pred Ccccccc-cccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCc------
Confidence 2234433 4677777777777776 456667777777777777777765443 467777777777777777664
Q ss_pred hHHhhhchhhcccCCcccCCCCccccCccccceeeccCccccc-ccccccccccccceeecccCCCccccCCccccCCCc
Q 037042 195 LQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG-VIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPN 273 (1002)
Q Consensus 195 ~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~ 273 (1002)
..|..++.+++|++|+|++|++++ .+|..+..+++|++|++++|+
T Consensus 141 -------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~--------------- 186 (306)
T 2z66_A 141 -------------------AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ--------------- 186 (306)
T ss_dssp -------------------CSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC---------------
T ss_pred -------------------cchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC---------------
Confidence 244556666777777777777765 355555555555555444444
Q ss_pred cchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCC-CCCc
Q 037042 274 LEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNC-KYLE 352 (1002)
Q Consensus 274 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l-~~L~ 352 (1002)
+++..|..+..+++|++|+|++|++++..+..|..+++|++|+|++|+++..+.. .+..+ ++|+
T Consensus 187 ----------l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-----~~~~~~~~L~ 251 (306)
T 2z66_A 187 ----------LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQ-----ELQHFPSSLA 251 (306)
T ss_dssp ----------CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSS-----SCCCCCTTCC
T ss_pred ----------cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHH-----HHHhhhccCC
Confidence 4444444455555555555555555554444555555555555555555543321 23344 2555
Q ss_pred EEeCCCCCCCC
Q 037042 353 FIDLSSNSIDG 363 (1002)
Q Consensus 353 ~L~Ls~N~l~~ 363 (1002)
+|+|++|.+.+
T Consensus 252 ~L~L~~N~~~~ 262 (306)
T 2z66_A 252 FLNLTQNDFAC 262 (306)
T ss_dssp EEECTTCCEEC
T ss_pred EEEccCCCeec
Confidence 55555555544
No 304
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=7.4e-30 Score=281.48 Aligned_cols=282 Identities=21% Similarity=0.249 Sum_probs=165.9
Q ss_pred hhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEe
Q 037042 276 ELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFID 355 (1002)
Q Consensus 276 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~ 355 (1002)
.++++++.++ .+|..+. ++|++|+|++|+++.+.+..|.++++|++|+|++|+++.+.... ..+..+++|++|+
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~---~~~~~~~~L~~L~ 84 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCS---QSDFGTTSLKYLD 84 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEE---HHHHSCSCCCEEE
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcc---cccccccccCEEE
Confidence 3444555554 3343332 46666666666666555555666666666666666665442100 1123345555555
Q ss_pred CCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCC-ccccCCCCCCEEEccCCc
Q 037042 356 LSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIP-ITLGKLQKLQVLYFPDNK 434 (1002)
Q Consensus 356 Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~ 434 (1002)
|++|.+.. +|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.
T Consensus 85 Ls~n~i~~---------------------------l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~ 137 (306)
T 2z66_A 85 LSFNGVIT---------------------------MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 137 (306)
T ss_dssp CCSCSEEE---------------------------EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSC
T ss_pred CCCCcccc---------------------------ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCc
Confidence 55554432 23345556666666666666665444 456666666666666666
Q ss_pred ccccCCccccCCccccEEEccCCcCCc-cCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcc
Q 037042 435 LEGSIPDEVCRLAKVYQLDLSNNKLSG-SIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPL 513 (1002)
Q Consensus 435 l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 513 (1002)
+.+..+..+..+++|++|+|++|.+++ ..|..|..+++|+.|++++|++++..|..|.++++|++|++++|++++..+.
T Consensus 138 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 217 (306)
T 2z66_A 138 TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTF 217 (306)
T ss_dssp CEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSG
T ss_pred CCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChh
Confidence 666666666666666666666666664 4566666666666666666666666666666666666666666666665555
Q ss_pred cccccccceeeeCCCCccCccCcccccCCc-cccEEEccCeeecccCC--cccccccccceeccccccccCCCcccccCC
Q 037042 514 EIGNLKVLVKIDFSMNNFSGVIPNAIGGIK-DLQFLFLEYNILQGSIP--DSFGDLMSLKSLNLSNNNLSGSIPVSLEKL 590 (1002)
Q Consensus 514 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 590 (1002)
.+..+++|+.|+|++|++++..|..+..++ +|+.|+|++|.+++..+ .....+..++.+....+.+....|..+.+.
T Consensus 218 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g~ 297 (306)
T 2z66_A 218 PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGM 297 (306)
T ss_dssp GGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTTC
T ss_pred hccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCCc
Confidence 666666677777777777666666666663 67777777777664321 112233444555555666666666655543
No 305
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=1.1e-29 Score=303.42 Aligned_cols=290 Identities=23% Similarity=0.300 Sum_probs=180.7
Q ss_pred cCCCCCCCCCcccccEee------CCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcE
Q 037042 32 KNWNSSISFCNWTGVTCD------VHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKL 105 (1002)
Q Consensus 32 ~~w~~~~~~c~w~gv~c~------~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 105 (1002)
+.|..+.+||.|+|..|. .....++.|++++|+++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++
T Consensus 13 ~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~ 85 (622)
T 3g06_A 13 SAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRT 85 (622)
T ss_dssp HHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCE
T ss_pred HHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCE
Confidence 368878889999775432 12234788999999988 7787776 78888888888888 5665 5677888
Q ss_pred EEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeecccc
Q 037042 106 LSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNG 185 (1002)
Q Consensus 106 L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 185 (1002)
|+|++|+|+ .+|. .+++|++|+|++|.+++ +|. .+++|++|+|++|+|+ .+|.. +++|++|+|++|+
T Consensus 86 L~Ls~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 86 LEVSGNQLT-SLPV----LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQ 152 (622)
T ss_dssp EEECSCCCS-CCCC----CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSC
T ss_pred EEcCCCcCC-cCCC----CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCCC---CCCCCEEECcCCc
Confidence 888888876 4665 46777777777777774 443 4566777777777776 34543 3666677777766
Q ss_pred ccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCC
Q 037042 186 LQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQS 265 (1002)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 265 (1002)
+++ +|. .+.+|+.|++++|+|+++ | .
T Consensus 153 l~~--------------------------l~~---~~~~L~~L~L~~N~l~~l-~---~--------------------- 178 (622)
T 3g06_A 153 LAS--------------------------LPA---LPSELCKLWAYNNQLTSL-P---M--------------------- 178 (622)
T ss_dssp CSC--------------------------CCC---CCTTCCEEECCSSCCSCC-C---C---------------------
T ss_pred CCC--------------------------cCC---ccCCCCEEECCCCCCCCC-c---c---------------------
Confidence 653 222 124455556666655532 2 1
Q ss_pred ccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhccc
Q 037042 266 IPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSL 345 (1002)
Q Consensus 266 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l 345 (1002)
.+++|+.|+|++|++++ +|.. +++|+.|++++|.|+.+ |.. +++|+.|+|++|+|+.+|
T Consensus 179 ----~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l-~~~---~~~L~~L~Ls~N~L~~lp--------- 237 (622)
T 3g06_A 179 ----LPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSL-PAL---PSGLKELIVSGNRLTSLP--------- 237 (622)
T ss_dssp ----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSC-CCC---CTTCCEEECCSSCCSCCC---------
T ss_pred ----cCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccccc-CCC---CCCCCEEEccCCccCcCC---------
Confidence 12344444444444442 2221 24555555555555532 211 244444445444444433
Q ss_pred CCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCC
Q 037042 346 SNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKL 425 (1002)
Q Consensus 346 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 425 (1002)
..++ +|+.|++++|+|++ +|. .+++|+.|+|++|+|+ .+|..|.++++|
T Consensus 238 ~~l~--------------------------~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L 286 (622)
T 3g06_A 238 VLPS--------------------------ELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSE 286 (622)
T ss_dssp CCCT--------------------------TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTT
T ss_pred CCCC--------------------------cCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhcccc
Confidence 1123 44555555555542 333 4567888888888888 667888889999
Q ss_pred CEEEccCCcccccCCccccCCc
Q 037042 426 QVLYFPDNKLEGSIPDEVCRLA 447 (1002)
Q Consensus 426 ~~L~L~~N~l~~~~p~~~~~l~ 447 (1002)
+.|+|++|.+++.+|..+..++
T Consensus 287 ~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 287 TTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CEEECCSCCCCHHHHHHHHHHH
T ss_pred CEEEecCCCCCCcCHHHHHhcc
Confidence 9999999999888877766544
No 306
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=5.3e-30 Score=288.68 Aligned_cols=278 Identities=19% Similarity=0.209 Sum_probs=157.2
Q ss_pred ccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCc
Q 037042 273 NLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLE 352 (1002)
Q Consensus 273 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~ 352 (1002)
.....++++|.++ .+|..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|+++.++.. .|.++++|+
T Consensus 32 ~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~ 103 (353)
T 2z80_A 32 RNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEED-----SFSSLGSLE 103 (353)
T ss_dssp TTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT-----TTTTCTTCC
T ss_pred CCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHh-----hcCCCCCCC
Confidence 3344566666665 3444332 3566666666666655555555555555555555555554322 234444444
Q ss_pred EEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCC-ccccCCCCCCEEEcc
Q 037042 353 FIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIP-ITLGKLQKLQVLYFP 431 (1002)
Q Consensus 353 ~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~ 431 (1002)
+|+|++|+|++ ..+..|+++++|++|+|++|++++..+ ..|.++++|++|+++
T Consensus 104 ~L~Ls~n~l~~--------------------------~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~ 157 (353)
T 2z80_A 104 HLDLSYNYLSN--------------------------LSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVG 157 (353)
T ss_dssp EEECCSSCCSS--------------------------CCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEE
T ss_pred EEECCCCcCCc--------------------------CCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECC
Confidence 44444443332 222335555566666666666553333 345555555555555
Q ss_pred CC-cccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCC
Q 037042 432 DN-KLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGP 510 (1002)
Q Consensus 432 ~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 510 (1002)
+| .+.+..+..+..+++|+.|++++|++++..|..|..+++|++|++++|++....+..+..+++|+.|++++|+++
T Consensus 158 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~-- 235 (353)
T 2z80_A 158 NMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLD-- 235 (353)
T ss_dssp ESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCT--
T ss_pred CCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccc--
Confidence 55 344444445555555555555555555555555555555555555555554433333334445555555555544
Q ss_pred CcccccccccceeeeCCCCccCccCccccc---CCccccEEEccCeeecc----cCCcccccccccceeccccccccCCC
Q 037042 511 LPLEIGNLKVLVKIDFSMNNFSGVIPNAIG---GIKDLQFLFLEYNILQG----SIPDSFGDLMSLKSLNLSNNNLSGSI 583 (1002)
Q Consensus 511 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~ 583 (1002)
+..+..+. ....++.++|++|.+++ .+|..+..+++|+.|+|++|+|+ .+
T Consensus 236 ----------------------~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i 292 (353)
T 2z80_A 236 ----------------------TFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SV 292 (353)
T ss_dssp ----------------------TCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CC
T ss_pred ----------------------cccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-cc
Confidence 43332222 24556677777777765 36778888899999999999998 45
Q ss_pred ccc-ccCCCccceeeCCCCcCcccCCC
Q 037042 584 PVS-LEKLSYLKDLNLSFNKLEGEIPK 609 (1002)
Q Consensus 584 p~~-~~~l~~L~~L~Ls~N~l~~~~p~ 609 (1002)
|.. |..+++|++|+|++|+++|.+|.
T Consensus 293 ~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 293 PDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 554 58899999999999999988773
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=6.2e-29 Score=289.68 Aligned_cols=233 Identities=24% Similarity=0.302 Sum_probs=213.8
Q ss_pred cccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEE
Q 037042 374 SHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLD 453 (1002)
Q Consensus 374 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 453 (1002)
+.+++.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|..+++|++|+
T Consensus 74 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 153 (452)
T 3zyi_A 74 PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153 (452)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEE
T ss_pred CCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEE
Confidence 35677788888888877888999999999999999999999999999999999999999999988888899999999999
Q ss_pred ccCCcCCccCCccccCCccCccccccc-ccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccC
Q 037042 454 LSNNKLSGSIPACFGDLASLRNLSLAS-NELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFS 532 (1002)
Q Consensus 454 Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 532 (1002)
|++|+|+...+..|..+++|+.|++++ |.+..+.+..|.++++|++|+|++|++++. | .+..+++|+.|+|++|+|+
T Consensus 154 L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~ 231 (452)
T 3zyi_A 154 LRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFP 231 (452)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCS
T ss_pred CCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCc
Confidence 999999988888999999999999999 566666666899999999999999999964 4 5889999999999999999
Q ss_pred ccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCC
Q 037042 533 GVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608 (1002)
Q Consensus 533 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 608 (1002)
+..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+...
T Consensus 232 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 232 EIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred ccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 9999999999999999999999999999999999999999999999998888889999999999999999987654
No 308
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=2.2e-32 Score=331.10 Aligned_cols=403 Identities=11% Similarity=0.029 Sum_probs=223.1
Q ss_pred CCCCCceEEcccccCCCCCccccccc--cccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCcccc
Q 037042 148 NCTYLRILRLSYNDFAGGIPKEIGNL--TKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNL 225 (1002)
Q Consensus 148 ~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L 225 (1002)
++++|++|+|++|.+++..+..+... .+|++|+|++|.-. .+. .++....++++|
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~--~~~---------------------~l~~~~~~~~~L 166 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGF--TTD---------------------GLLSIVTHCRKI 166 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEE--EHH---------------------HHHHHHHHCTTC
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCc--CHH---------------------HHHHHHhhCCCC
Confidence 66777777777777766555556553 34777777776511 000 112223456777
Q ss_pred ceeeccCcccccc----cccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCee
Q 037042 226 EVLALGLNKLVGV----IPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRL 301 (1002)
Q Consensus 226 ~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 301 (1002)
++|+|++|.+++. ++..+.++++|+.|++++|.+++.-. +.++..+.++++|++|
T Consensus 167 ~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~---------------------~~l~~~~~~~~~L~~L 225 (592)
T 3ogk_B 167 KTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISP---------------------KDLETIARNCRSLVSV 225 (592)
T ss_dssp SEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCH---------------------HHHHHHHHHCTTCCEE
T ss_pred CEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCH---------------------HHHHHHHhhCCCCcEE
Confidence 7777777776654 23333444555555555554431000 1122233344455555
Q ss_pred ecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEe
Q 037042 302 ELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFD 381 (1002)
Q Consensus 302 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~ 381 (1002)
+|++|.+.+ +|..+.++++|++|+++.+....-. ......+..+++|+.|+++++....+. ......++|+.|+
T Consensus 226 ~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~--~~~~~~l~~~~~L~~L~l~~~~~~~l~---~~~~~~~~L~~L~ 299 (592)
T 3ogk_B 226 KVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGM--PEKYMNLVFPRKLCRLGLSYMGPNEMP---ILFPFAAQIRKLD 299 (592)
T ss_dssp ECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTC--TTSSSCCCCCTTCCEEEETTCCTTTGG---GGGGGGGGCCEEE
T ss_pred eccCccHHH-HHHHHhhhhHHHhhcccccccccch--HHHHHHhhccccccccCccccchhHHH---HHHhhcCCCcEEe
Confidence 555555443 3344455555555555432111000 011123445555555555554322221 1111223455555
Q ss_pred cCCCCCCCCCC-cccCCCCCccEEEccCCccC-ccCCccccCCCCCCEEEcc-----------CCccccc-CCccccCCc
Q 037042 382 MSDCNVSGSIP-EEIGNLTNLIGFYLGGNNLN-GSIPITLGKLQKLQVLYFP-----------DNKLEGS-IPDEVCRLA 447 (1002)
Q Consensus 382 L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~-----------~N~l~~~-~p~~~~~l~ 447 (1002)
+++|.+++... ..+..+++|+.|+++ |.+. +.++..+..+++|++|+++ .|.+++. ++..+..++
T Consensus 300 Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 378 (592)
T 3ogk_B 300 LLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQ 378 (592)
T ss_dssp ETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCT
T ss_pred cCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCc
Confidence 55555443322 335677778888777 3333 3334444567778888887 3555543 222234467
Q ss_pred cccEEEccCCcCCccCCccccC-CccCcccccc----ccccccc-----CCccccccccCceeeccCC--CCCCCCcccc
Q 037042 448 KVYQLDLSNNKLSGSIPACFGD-LASLRNLSLA----SNELISV-----IPSTFWNLKDILYLNLSSN--SLTGPLPLEI 515 (1002)
Q Consensus 448 ~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~----~N~l~~~-----~~~~~~~l~~L~~L~Ls~N--~l~~~~~~~~ 515 (1002)
+|++|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+.++++|++|++++| .+++..+..+
T Consensus 379 ~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~ 458 (592)
T 3ogk_B 379 ELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYI 458 (592)
T ss_dssp TCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHH
T ss_pred cCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHH
Confidence 7888888777777665555554 7778888885 5666653 3334666788888888643 3554433344
Q ss_pred c-ccccceeeeCCCCccCc-cCcccccCCccccEEEccCeeeccc-CCcccccccccceeccccccccCCCcccc-cCCC
Q 037042 516 G-NLKVLVKIDFSMNNFSG-VIPNAIGGIKDLQFLFLEYNILQGS-IPDSFGDLMSLKSLNLSNNNLSGSIPVSL-EKLS 591 (1002)
Q Consensus 516 ~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~ 591 (1002)
. .+++|+.|++++|++++ .++..+.++++|+.|+|++|.+++. ++..+..+++|+.|+|++|++++.-...+ ..++
T Consensus 459 ~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p 538 (592)
T 3ogk_B 459 GQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARP 538 (592)
T ss_dssp HHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCT
T ss_pred HHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCC
Confidence 3 36778888888888775 3345557778888888888887654 33344567788888888888775433333 3456
Q ss_pred ccceeeCCCC
Q 037042 592 YLKDLNLSFN 601 (1002)
Q Consensus 592 ~L~~L~Ls~N 601 (1002)
.+....+..+
T Consensus 539 ~l~~~~~~~~ 548 (592)
T 3ogk_B 539 YWNIELIPSR 548 (592)
T ss_dssp TEEEEEECCC
T ss_pred CcEEEEecCc
Confidence 6666555554
No 309
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=286.65 Aligned_cols=232 Identities=24% Similarity=0.307 Sum_probs=210.9
Q ss_pred ccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEc
Q 037042 375 HSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDL 454 (1002)
Q Consensus 375 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 454 (1002)
.+++.|+|++|+|++..+..|.++++|++|+|++|+++++.+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 46677777777777777788999999999999999999888899999999999999999999777778999999999999
Q ss_pred cCCcCCccCCccccCCccCccccccc-ccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCc
Q 037042 455 SNNKLSGSIPACFGDLASLRNLSLAS-NELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSG 533 (1002)
Q Consensus 455 s~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 533 (1002)
++|+|+...+..|..+++|+.|+|++ |.+..+.+..|.++++|++|+|++|+++. +| .+..+++|+.|+|++|+|++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCc
Confidence 99999988888999999999999999 45666666689999999999999999995 44 58899999999999999999
Q ss_pred cCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCC
Q 037042 534 VIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608 (1002)
Q Consensus 534 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 608 (1002)
..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.+...
T Consensus 222 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 222 IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred cChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 999999999999999999999999999999999999999999999998888889999999999999999987543
No 310
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.6e-28 Score=286.22 Aligned_cols=244 Identities=25% Similarity=0.304 Sum_probs=158.3
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N 136 (1002)
.++.++.+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|+ .++...|.++++|++|+|++|
T Consensus 58 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 58 KVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR-QIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSS
T ss_pred EEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccC-CcChhhccCcccCCEEECCCC
Confidence 3445555555 4555443 46666666666666655666666666666666666665 333344455666666666666
Q ss_pred cccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccc-cccccccchhhHHhhhchhhcccCCcccCCC
Q 037042 137 MFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFN-GLQGAYDHGFLQIFVKNIFVQFSHNFSKCEI 215 (1002)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 215 (1002)
+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++| .++ .+
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~--------------------------~i 187 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLE--------------------------YI 187 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCC--------------------------EE
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCcc--------------------------cc
Confidence 666544455556666666666666665444445555666666666553 222 12
Q ss_pred C-ccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccc
Q 037042 216 P-NEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFN 294 (1002)
Q Consensus 216 p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 294 (1002)
| ..+.++++|++|+|++|++++. + .+..+++|++|+|++|++++..|..|.+
T Consensus 188 ~~~~~~~l~~L~~L~L~~n~l~~~-------------------------~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 240 (452)
T 3zyi_A 188 SEGAFEGLFNLKYLNLGMCNIKDM-------------------------P--NLTPLVGLEELEMSGNHFPEIRPGSFHG 240 (452)
T ss_dssp CTTTTTTCTTCCEEECTTSCCSSC-------------------------C--CCTTCTTCCEEECTTSCCSEECGGGGTT
T ss_pred ChhhccCCCCCCEEECCCCccccc-------------------------c--cccccccccEEECcCCcCcccCcccccC
Confidence 2 2344555555555555555432 1 1345677888888888888888888888
Q ss_pred cCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCC
Q 037042 295 ASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSID 362 (1002)
Q Consensus 295 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 362 (1002)
+++|++|+|++|+|+++.|..|.++++|+.|+|++|+|+.++.+. |..+++|+.|+|++|.+.
T Consensus 241 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-----~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 241 LSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDL-----FTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTS-----STTCTTCCEEECCSSCEE
T ss_pred ccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHH-----hccccCCCEEEccCCCcC
Confidence 889999999999998888888888899999999999888887653 677888888888888765
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=4.3e-29 Score=272.30 Aligned_cols=211 Identities=28% Similarity=0.317 Sum_probs=130.6
Q ss_pred CCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCc-CCccCCccccCCccCcccc
Q 037042 399 TNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNK-LSGSIPACFGDLASLRNLS 477 (1002)
Q Consensus 399 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~ 477 (1002)
++|++|++++|++++..+..|..+++|++|+|++|.+++..|..+..+++|++|+|++|+ ++...|..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 355555555555555555555555666666666666555555555556666666666664 5544455566666666666
Q ss_pred cccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecc
Q 037042 478 LASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQG 557 (1002)
Q Consensus 478 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 557 (1002)
+++|.+.+..|..|.++++|++|++++|++++..+..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|.+++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 66666666555566666666666666666665555556666666666666666665555566666666666666666666
Q ss_pred cCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCC
Q 037042 558 SIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPK 609 (1002)
Q Consensus 558 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 609 (1002)
..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++.+..+.
T Consensus 192 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred cCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc
Confidence 6666666666666666666666655555566666666666666666655443
No 312
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=8.4e-29 Score=269.96 Aligned_cols=253 Identities=20% Similarity=0.228 Sum_probs=200.2
Q ss_pred cEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEcc
Q 037042 352 EFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFP 431 (1002)
Q Consensus 352 ~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 431 (1002)
+.++.+++.++.++. .++++|+.|++++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+++
T Consensus 14 ~~~~c~~~~l~~ip~-----~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 88 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPV-----GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLS 88 (285)
T ss_dssp CEEECCSSCCSSCCT-----TCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred eEEEcCcCCcccCCc-----CCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCC
Confidence 344555555544321 123466777777777776666778888888889998888888888888888889999998
Q ss_pred CCc-ccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCC
Q 037042 432 DNK-LEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGP 510 (1002)
Q Consensus 432 ~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 510 (1002)
+|. ++...|..+..+++|++|+|++|++++..|..|..+++|++|++++|++.+..+..|.++++|++|++++|++++.
T Consensus 89 ~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 168 (285)
T 1ozn_A 89 DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV 168 (285)
T ss_dssp SCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccccc
Confidence 887 7766678888888899999999988888788888888899999999988888777788888899999999988876
Q ss_pred CcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCC
Q 037042 511 LPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKL 590 (1002)
Q Consensus 511 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 590 (1002)
.+..|..+++|+.|++++|.+++..|..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++....+.. .-+
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~ 247 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLW 247 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHH
T ss_pred CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHH
Confidence 6667888889999999999998888888888899999999999998777777888889999999999888644321 122
Q ss_pred CccceeeCCCCcCcccCCCC
Q 037042 591 SYLKDLNLSFNKLEGEIPKG 610 (1002)
Q Consensus 591 ~~L~~L~Ls~N~l~~~~p~~ 610 (1002)
..++.+..+.|.+.+..|..
T Consensus 248 ~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 248 AWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp HHHHHCCSEECCCBEEESGG
T ss_pred HHHHhcccccCccccCCchH
Confidence 44666677788888887763
No 313
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.3e-28 Score=273.57 Aligned_cols=224 Identities=18% Similarity=0.262 Sum_probs=191.4
Q ss_pred cccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEcc
Q 037042 376 SLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLS 455 (1002)
Q Consensus 376 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 455 (1002)
.++.|+|++|+++ .+|..+..+++|++|+|++|+++ .+|..++++++|++|+|++|+++ .+|..+..+++|++|+|+
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 4555555566655 55666777888888888888887 67777888888888888888887 677778888888888888
Q ss_pred CCcCCccCCcccc---------CCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeC
Q 037042 456 NNKLSGSIPACFG---------DLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDF 526 (1002)
Q Consensus 456 ~N~l~~~~p~~~~---------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 526 (1002)
+|++.+.+|..+. .+++|++|+|++|+++ .+|..+.++++|++|++++|++++ +|..+..+++|+.|+|
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~L 236 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDL 236 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEEC
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEEC
Confidence 8777777777665 4999999999999998 568889999999999999999996 5667999999999999
Q ss_pred CCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCc
Q 037042 527 SMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604 (1002)
Q Consensus 527 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 604 (1002)
++|++.+.+|..|+++++|+.|+|++|.+.+.+|..|..+++|+.|+|++|++.+.+|..+.++++|+.++++.|.+.
T Consensus 237 s~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 237 RGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred cCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999987765
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=6e-30 Score=282.65 Aligned_cols=203 Identities=18% Similarity=0.221 Sum_probs=124.7
Q ss_pred CCCCccEEEccCCccCccCCccc--cCCCCCCEEEccCCcccccCCccccCC-----ccccEEEccCCcCCccCCccccC
Q 037042 397 NLTNLIGFYLGGNNLNGSIPITL--GKLQKLQVLYFPDNKLEGSIPDEVCRL-----AKVYQLDLSNNKLSGSIPACFGD 469 (1002)
Q Consensus 397 ~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~ 469 (1002)
++++|++|+|++|++++.+|..+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+.
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 34455555555555555555443 4555555555555555544 4444444 55555566666555555555556
Q ss_pred CccCccccccccccccc--CCccc--cccccCceeeccCCCCCCC---CcccccccccceeeeCCCCccCccCc-ccccC
Q 037042 470 LASLRNLSLASNELISV--IPSTF--WNLKDILYLNLSSNSLTGP---LPLEIGNLKVLVKIDFSMNNFSGVIP-NAIGG 541 (1002)
Q Consensus 470 l~~L~~L~L~~N~l~~~--~~~~~--~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~ 541 (1002)
+++|++|+|++|++.+. .+..+ .++++|++|+|++|++++. ....+.++++|+.|+|++|++++.+| ..+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 66666666666655443 12222 5666666666666666631 11233456677777777777776654 44556
Q ss_pred CccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcc
Q 037042 542 IKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEG 605 (1002)
Q Consensus 542 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 605 (1002)
+++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|++|+|++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 777888888888877 5666665 7788888888888765 55 7788888888888888875
No 315
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.4e-29 Score=296.66 Aligned_cols=215 Identities=21% Similarity=0.186 Sum_probs=173.3
Q ss_pred cccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEcc
Q 037042 376 SLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLS 455 (1002)
Q Consensus 376 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 455 (1002)
+|+.|+|++|++++..|..|+.+++|++|+|++|.+++..| |..+++|++|+|++|.|++..+ .++|+.|+|+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 56666666667776677788888888888888888887665 8888888888888888885433 2788888888
Q ss_pred CCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCccccc-ccccceeeeCCCCccCcc
Q 037042 456 NNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIG-NLKVLVKIDFSMNNFSGV 534 (1002)
Q Consensus 456 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~ 534 (1002)
+|.|++..+.. +++|+.|+|++|.+++..|..|+++++|++|+|++|.+++..|..+. .+++|+.|+|++|.|++.
T Consensus 108 ~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 88888765543 56788888888888888888888888888899988888887777775 788888899999988876
Q ss_pred CcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCc
Q 037042 535 IPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLE 604 (1002)
Q Consensus 535 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 604 (1002)
.+ +..+++|+.|+|++|.|++.+| .|..+++|+.|+|++|+|++ +|..+..+++|+.|++++|++.
T Consensus 185 ~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 185 KG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp EC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred cc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 33 3458888999999999886444 58888889999999998885 6777888888999999999888
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=2.2e-29 Score=278.79 Aligned_cols=266 Identities=20% Similarity=0.172 Sum_probs=159.2
Q ss_pred cchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcE
Q 037042 274 LEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEF 353 (1002)
Q Consensus 274 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~ 353 (1002)
++.++++.+.+...++..+..+++|++|+|++|+|++..|..|+++++|++|+|++|+++.++. +..+++|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-------~~~l~~L~~ 84 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-------LESLSTLRT 84 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-------ETTCTTCCE
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-------hhhcCCCCE
Confidence 4455667777765555556667788888888888888877888888888888888888876542 667777777
Q ss_pred EeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCC
Q 037042 354 IDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDN 433 (1002)
Q Consensus 354 L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 433 (1002)
|+|++|.|+++.. .++|++|++++|++++..+.. +++|++|++++|
T Consensus 85 L~Ls~n~l~~l~~-------------------------------~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N 130 (317)
T 3o53_A 85 LDLNNNYVQELLV-------------------------------GPSIETLHAANNNISRVSCSR---GQGKKNIYLANN 130 (317)
T ss_dssp EECCSSEEEEEEE-------------------------------CTTCCEEECCSSCCSEEEECC---CSSCEEEECCSS
T ss_pred EECcCCccccccC-------------------------------CCCcCEEECCCCccCCcCccc---cCCCCEEECCCC
Confidence 7777777664421 134444444444444332222 344555555555
Q ss_pred cccccCCccccCCccccEEEccCCcCCccCCccc-cCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCc
Q 037042 434 KLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACF-GDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLP 512 (1002)
Q Consensus 434 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 512 (1002)
++++..+..+..+++|++|+|++|++++..+..+ ..+++|++|+|++|++++..+ ...+++|++|+|++|++++. |
T Consensus 131 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l-~ 207 (317)
T 3o53_A 131 KITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-G 207 (317)
T ss_dssp CCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-C
T ss_pred CCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcc-h
Confidence 5554444455555555555555555554444444 245555555555555554421 22355666666666666643 3
Q ss_pred ccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeec-ccCCcccccccccceeccc-cccccCCCc
Q 037042 513 LEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQ-GSIPDSFGDLMSLKSLNLS-NNNLSGSIP 584 (1002)
Q Consensus 513 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls-~N~l~~~~p 584 (1002)
..+..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|.+. +.+|..+..+++|+.|+++ .+.++|..|
T Consensus 208 ~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 208 PEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp GGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred hhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 336666666666666666663 4555666666666666666666 5566666666666666666 334554433
No 317
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=7.5e-28 Score=279.53 Aligned_cols=246 Identities=24% Similarity=0.276 Sum_probs=191.5
Q ss_pred EEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCC
Q 037042 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSK 135 (1002)
Q Consensus 56 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~ 135 (1002)
..++.++.+++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|+++ .++...|.++++|++|+|++
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR-TIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCC-EECGGGGTTCSSCCEEECCS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCC-ccChhhccCCccCCEEECCC
Confidence 46777788887 7787775 68999999999999888888999999999999999887 55666667888888888888
Q ss_pred CcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCC
Q 037042 136 NMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEI 215 (1002)
Q Consensus 136 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 215 (1002)
|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|...+ .+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~-------------------------~i 176 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLS-------------------------YI 176 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCC-------------------------EE
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcc-------------------------ee
Confidence 88886666678888888888888888886666678888888888888744321 22
Q ss_pred C-ccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccc
Q 037042 216 P-NEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFN 294 (1002)
Q Consensus 216 p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 294 (1002)
| ..|.++++|++|+|++|+++.+ |. +..+++|++|+|++|++++..|..|.+
T Consensus 177 ~~~~~~~l~~L~~L~L~~n~l~~~-~~--------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 229 (440)
T 3zyj_A 177 SEGAFEGLSNLRYLNLAMCNLREI-PN--------------------------LTPLIKLDELDLSGNHLSAIRPGSFQG 229 (440)
T ss_dssp CTTTTTTCSSCCEEECTTSCCSSC-CC--------------------------CTTCSSCCEEECTTSCCCEECTTTTTT
T ss_pred CcchhhcccccCeecCCCCcCccc-cc--------------------------cCCCcccCEEECCCCccCccChhhhcc
Confidence 2 3566777777777777777632 21 234567777777777777777888888
Q ss_pred cCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCC
Q 037042 295 ASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSID 362 (1002)
Q Consensus 295 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 362 (1002)
+++|++|+|++|+|+++.+..|.++++|+.|+|++|+|+.++.+. |..+++|+.|+|++|.+.
T Consensus 230 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-----~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 230 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDL-----FTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTT-----TSSCTTCCEEECCSSCEE
T ss_pred CccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhH-----hccccCCCEEEcCCCCcc
Confidence 888888888888888888888888888888888888888877653 677888888888888765
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.1e-27 Score=283.63 Aligned_cols=269 Identities=24% Similarity=0.318 Sum_probs=159.0
Q ss_pred cCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceee
Q 037042 101 HTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELY 180 (1002)
Q Consensus 101 ~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 180 (1002)
.++++|++++|.|+ .+|..++ ++|++|+|++|.|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~---~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~ 107 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELS 107 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC---TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC---CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEE
Confidence 35777777777777 6776653 56777777777777 4554 4567777777777776 4554 556677777
Q ss_pred eccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCc
Q 037042 181 LSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLS 260 (1002)
Q Consensus 181 Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 260 (1002)
|++|++++ +|. .+++|+.|++++|+|++ +|..
T Consensus 108 Ls~N~l~~--------------------------l~~---~l~~L~~L~L~~N~l~~-lp~~------------------ 139 (622)
T 3g06_A 108 IFSNPLTH--------------------------LPA---LPSGLCKLWIFGNQLTS-LPVL------------------ 139 (622)
T ss_dssp ECSCCCCC--------------------------CCC---CCTTCCEEECCSSCCSC-CCCC------------------
T ss_pred CcCCcCCC--------------------------CCC---CCCCcCEEECCCCCCCc-CCCC------------------
Confidence 77776663 333 34556666666666654 2221
Q ss_pred cccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhh
Q 037042 261 GSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELS 340 (1002)
Q Consensus 261 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~ 340 (1002)
+++|++|+|++|++++ +|. .+.+|+.|++++|+|+++ | ..+++|+.|+|++|+|+.+|.
T Consensus 140 ----------l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~l-~---~~~~~L~~L~Ls~N~l~~l~~--- 198 (622)
T 3g06_A 140 ----------PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTSL-P---MLPSGLQELSVSDNQLASLPT--- 198 (622)
T ss_dssp ----------CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSCCCC---
T ss_pred ----------CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCCC-c---ccCCCCcEEECCCCCCCCCCC---
Confidence 1344444444444442 222 124455555555555542 2 234455555555555554432
Q ss_pred hhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCcccc
Q 037042 341 FLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLG 420 (1002)
Q Consensus 341 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 420 (1002)
.+++|+.|++++|.|+.+ |.. +++|+.|+|++|+|++ +| .
T Consensus 199 ------~~~~L~~L~L~~N~l~~l---------------------------~~~---~~~L~~L~Ls~N~L~~-lp---~ 238 (622)
T 3g06_A 199 ------LPSELYKLWAYNNRLTSL---------------------------PAL---PSGLKELIVSGNRLTS-LP---V 238 (622)
T ss_dssp ------CCTTCCEEECCSSCCSSC---------------------------CCC---CTTCCEEECCSSCCSC-CC---C
T ss_pred ------ccchhhEEECcCCccccc---------------------------CCC---CCCCCEEEccCCccCc-CC---C
Confidence 123444444444444432 221 2456666666666664 33 3
Q ss_pred CCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccc
Q 037042 421 KLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLK 495 (1002)
Q Consensus 421 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 495 (1002)
.+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..|..+++|+.|+|++|.+++..|..+..++
T Consensus 239 ~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 239 LPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 4466777777777776 3444 4567777778777777 5677777788888888888888777777666655
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=3e-29 Score=277.73 Aligned_cols=89 Identities=16% Similarity=0.176 Sum_probs=51.3
Q ss_pred CCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCC-ccCCccccCCccCccc
Q 037042 398 LTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS-GSIPACFGDLASLRNL 476 (1002)
Q Consensus 398 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L 476 (1002)
+++|++|+|++|++++. |..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|.+. +.+|..+..+++|+.|
T Consensus 190 l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l 267 (317)
T 3o53_A 190 FAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTV 267 (317)
T ss_dssp CTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHH
T ss_pred cccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEE
Confidence 44555555555555533 233555666666666666665 34555666666666666666666 5556666666777777
Q ss_pred ccccc-cccccCC
Q 037042 477 SLASN-ELISVIP 488 (1002)
Q Consensus 477 ~L~~N-~l~~~~~ 488 (1002)
++++| .+.+..|
T Consensus 268 ~l~~~~~l~~~~~ 280 (317)
T 3o53_A 268 AKQTVKKLTGQNE 280 (317)
T ss_dssp HHHHHHHHHSSSS
T ss_pred ECCCchhccCCch
Confidence 76633 4444433
No 320
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=3.4e-27 Score=254.86 Aligned_cols=218 Identities=25% Similarity=0.329 Sum_probs=176.0
Q ss_pred CCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEeccccccccc
Q 037042 38 ISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEI 117 (1002)
Q Consensus 38 ~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~i 117 (1002)
.++|.|.|+.|+... .++.+++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++ .+
T Consensus 2 ~~~C~~~~~~C~c~~-~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i 76 (270)
T 2o6q_A 2 EALCKKDGGVCSCNN-NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TL 76 (270)
T ss_dssp CCCBGGGTCSBEEET-TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CC
T ss_pred CccCCCCCCCCEeCC-CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-ee
Confidence 478999999998743 4678999999999 5887765 68999999999999777778999999999999999998 78
Q ss_pred CcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHH
Q 037042 118 PTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQI 197 (1002)
Q Consensus 118 p~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 197 (1002)
|..+|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++.
T Consensus 77 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~-------- 148 (270)
T 2o6q_A 77 PAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSL-------- 148 (270)
T ss_dssp CTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC--------
T ss_pred ChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCcc--------
Confidence 888888999999999999999977777889999999999999999987788889999999999999998742
Q ss_pred hhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchh
Q 037042 198 FVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEEL 277 (1002)
Q Consensus 198 ~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 277 (1002)
.+..++.+++|++|+|++|+++++.+..|..+++|+.|+
T Consensus 149 -----------------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~------------------------ 187 (270)
T 2o6q_A 149 -----------------PKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLK------------------------ 187 (270)
T ss_dssp -----------------CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE------------------------
T ss_pred -----------------CHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEE------------------------
Confidence 223467888899999998888876665555555555555
Q ss_pred hcccccccccccccccccCCCCeeecCCCccCC
Q 037042 278 YLWGNHFSGSIPNFIFNASKLSRLELQKNSFSG 310 (1002)
Q Consensus 278 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 310 (1002)
|++|++++..+..+..+++|+.|+|++|.+..
T Consensus 188 -L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 188 -LDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp -CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred -CCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 44555544444456666777777777777653
No 321
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=4.6e-31 Score=319.64 Aligned_cols=470 Identities=15% Similarity=0.127 Sum_probs=261.4
Q ss_pred CCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCC---CCCcc------------cccccCC
Q 037042 39 SFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSG---SIPFS------------IFNIHTL 103 (1002)
Q Consensus 39 ~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~---~~p~~------------~~~l~~L 103 (1002)
-|++|.++... ....++++..... ..+..+..+++|++|+|+++.... ..|.. ...+++|
T Consensus 33 vck~W~~~~~~----~~~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 33 VCKSWYEIERW----CRRKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp SCHHHHHHHHH----HCCEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHHhhhh----hceEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 45589999322 3446676654332 222346788999999999976321 22222 2357788
Q ss_pred cEEEecccccccccCcccCCCCCCCCEEeCCCC-ccccc-CCccccCCCCCceEEcccccCCCCCccccc----cccccc
Q 037042 104 KLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN-MFHGG-IPSALSNCTYLRILRLSYNDFAGGIPKEIG----NLTKLE 177 (1002)
Q Consensus 104 ~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~~L~ 177 (1002)
++|+|++|.+++..+..+...+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+.++. .+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 888888888877666665445788888888888 55532 455556788888888888887765544443 566888
Q ss_pred eeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCc-ccccccccccccccccceeeccc
Q 037042 178 ELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLN-KLVGVIPAEIFNMSTIQGVGLQN 256 (1002)
Q Consensus 178 ~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~ 256 (1002)
+|+|++|. ....+. .++..+.++++|++|++++| .+++ +|..+..+++|+.|+++.
T Consensus 188 ~L~l~~~~-~~~~~~---------------------~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~ 244 (594)
T 2p1m_B 188 SLNISCLA-SEVSFS---------------------ALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGG 244 (594)
T ss_dssp EEECTTCC-SCCCHH---------------------HHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSB
T ss_pred EEEecccC-CcCCHH---------------------HHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEccccc
Confidence 88888886 211110 11222344678888888887 4444 666777777777777665
Q ss_pred CCCccccCCccccCCCccchhhcccccccccccccccccCCCCee-ecCCCccCCCCccccccccccchhccccccCccc
Q 037042 257 NSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRL-ELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSL 335 (1002)
Q Consensus 257 N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L-~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l 335 (1002)
+.. +++.|.+.+ ++..+.++++|+.| .+.+... +.++..+..+++|++|+|++|.++..
T Consensus 245 ~~~------------------~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~ 304 (594)
T 2p1m_B 245 YTA------------------EVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSY 304 (594)
T ss_dssp CCC------------------CCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHH
T ss_pred ccC------------------ccchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHH
Confidence 431 133455553 33356677777777 3433322 23344445566677777776665432
Q ss_pred hhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccC-------
Q 037042 336 TLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGG------- 408 (1002)
Q Consensus 336 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~------- 408 (1002)
.. ...+..+++|+.|++++| +... .++.....+++|++|++.+
T Consensus 305 ~l----~~~~~~~~~L~~L~l~~~-~~~~-------------------------~l~~l~~~~~~L~~L~L~~~~~~g~~ 354 (594)
T 2p1m_B 305 DL----VKLLCQCPKLQRLWVLDY-IEDA-------------------------GLEVLASTCKDLRELRVFPSEPFVME 354 (594)
T ss_dssp HH----HHHHTTCTTCCEEEEEGG-GHHH-------------------------HHHHHHHHCTTCCEEEEECSCTTCSS
T ss_pred HH----HHHHhcCCCcCEEeCcCc-cCHH-------------------------HHHHHHHhCCCCCEEEEecCcccccc
Confidence 11 111345556666666554 2100 0111223356677776632
Q ss_pred --CccCccCCcccc-CCCCCCEEEccCCcccccCCcccc-CCccccEEEccCCcCCccCCccccCCccCccccccccccc
Q 037042 409 --NNLNGSIPITLG-KLQKLQVLYFPDNKLEGSIPDEVC-RLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELI 484 (1002)
Q Consensus 409 --N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 484 (1002)
+.+++.....+. .+++|+.|+++.|.+++..+..+. .+++|+.|+|+.|...+ -|.++
T Consensus 355 ~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~------------------~~~l~ 416 (594)
T 2p1m_B 355 PNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKA------------------PDYLT 416 (594)
T ss_dssp CSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTC------------------CCTTT
T ss_pred cCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCC------------------ccccc
Confidence 334322222222 255555555555555543333332 24455555555110000 02222
Q ss_pred cc-----CCccccccccCceeeccCCCCCCCCcccccc-cccceeeeCCCCccCccCcccc-cCCccccEEEccCeeecc
Q 037042 485 SV-----IPSTFWNLKDILYLNLSSNSLTGPLPLEIGN-LKVLVKIDFSMNNFSGVIPNAI-GGIKDLQFLFLEYNILQG 557 (1002)
Q Consensus 485 ~~-----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~ 557 (1002)
+. ++..+.++++|+.|++++ .+++..+..+.. +++|+.|+|++|.+++..+..+ .++++|+.|+|++|.+++
T Consensus 417 ~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 417 LEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred CCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 11 112244556666666655 444433333433 5667777777777665444444 556777777777777754
Q ss_pred cCCc-ccccccccceeccccccccCCCcccc-cCCCccceeeCCCCcCcc
Q 037042 558 SIPD-SFGDLMSLKSLNLSNNNLSGSIPVSL-EKLSYLKDLNLSFNKLEG 605 (1002)
Q Consensus 558 ~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~ 605 (1002)
..+. ....+++|+.|++++|+++......+ ..+++|+...+..+.-..
T Consensus 496 ~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~~ 545 (594)
T 2p1m_B 496 KALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAPD 545 (594)
T ss_dssp HHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSCGG
T ss_pred HHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCccc
Confidence 4333 33446777777777777753333333 345666666665554433
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.4e-27 Score=279.71 Aligned_cols=237 Identities=21% Similarity=0.197 Sum_probs=149.3
Q ss_pred ccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccc
Q 037042 294 NASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNL 373 (1002)
Q Consensus 294 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 373 (1002)
.+++|++|+|++|.|++..|..|+++++|++|+|++|.++.++. +..+++|++|+|++|.|+++.+
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-------l~~l~~L~~L~Ls~N~l~~l~~------- 97 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-------LESLSTLRTLDLNNNYVQELLV------- 97 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-------CTTCTTCCEEECCSSEEEEEEE-------
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-------cccCCCCCEEEecCCcCCCCCC-------
Confidence 34478888888888887777778888888888888888776542 6677778888888877765421
Q ss_pred cccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEE
Q 037042 374 SHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLD 453 (1002)
Q Consensus 374 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 453 (1002)
.++|+.|++++|+|++..+.. +++|+.|+|++|.+ ++..|..+..+++|+.|+
T Consensus 98 ~~~L~~L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l------------------------~~~~~~~~~~l~~L~~L~ 150 (487)
T 3oja_A 98 GPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKI------------------------TMLRDLDEGCRSRVQYLD 150 (487)
T ss_dssp CTTCCEEECCSSCCCCEEECC---CSSCEEEECCSSCC------------------------CSGGGBCGGGGSSEEEEE
T ss_pred CCCcCEEECcCCcCCCCCccc---cCCCCEEECCCCCC------------------------CCCCchhhcCCCCCCEEE
Confidence 134555555555554433321 23444444444444 444444444445555555
Q ss_pred ccCCcCCccCCcccc-CCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccC
Q 037042 454 LSNNKLSGSIPACFG-DLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFS 532 (1002)
Q Consensus 454 Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 532 (1002)
|++|.+++..|..|. .+++|+.|+|++|.|++..+ +..+++|++|+|++|.+++. |..+..+++|+.|+|++|.|+
T Consensus 151 Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC
T ss_pred CCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCc
Confidence 555555544444443 45555555555555554422 22466667777777777653 334667777777777777777
Q ss_pred ccCcccccCCccccEEEccCeeec-ccCCcccccccccceeccc
Q 037042 533 GVIPNAIGGIKDLQFLFLEYNILQ-GSIPDSFGDLMSLKSLNLS 575 (1002)
Q Consensus 533 ~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls 575 (1002)
+ +|..+..+++|+.|++++|.+. +.+|..+..++.|+.|+++
T Consensus 228 ~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 228 L-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp E-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred c-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 5 4666777788888888888887 6677778888888888886
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=3e-26 Score=248.48 Aligned_cols=226 Identities=22% Similarity=0.252 Sum_probs=179.4
Q ss_pred ecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCC
Q 037042 381 DMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS 460 (1002)
Q Consensus 381 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 460 (1002)
+..+.++. .+|..+. ++|++|++++|++++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|+++
T Consensus 13 ~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (276)
T 2z62_A 13 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (276)
T ss_dssp ECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccC
Confidence 33444443 3444332 46777778888777776767777888888888888887766777777888888888888888
Q ss_pred ccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCC-CcccccccccceeeeCCCCccCccCcccc
Q 037042 461 GSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGP-LPLEIGNLKVLVKIDFSMNNFSGVIPNAI 539 (1002)
Q Consensus 461 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 539 (1002)
+..+..|..+++|++|++++|++.+..+..|.++++|++|++++|++++. +|..+.++++|+.|++++|++++..+..|
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 169 (276)
T 2z62_A 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 169 (276)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred ccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHh
Confidence 77777788888888888888888877777788888888888888888764 57888888899999999999888888888
Q ss_pred cCCcccc----EEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCCC
Q 037042 540 GGIKDLQ----FLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPKG 610 (1002)
Q Consensus 540 ~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 610 (1002)
..+.+|+ .|++++|.+++..+..+.. .+|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|..
T Consensus 170 ~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 170 RVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp HHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred hhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 8777777 8999999999766666654 48999999999999777777889999999999999999988754
No 324
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.4e-28 Score=292.06 Aligned_cols=185 Identities=18% Similarity=0.074 Sum_probs=130.4
Q ss_pred eeccCcceEEEEE-eCCCcEEEEEEeeccc----------chhHHHHHHHHHHHHhc-cCCCcceeeeEEecCchhhHHH
Q 037042 714 IGRGGFGSVYKAR-IQDGMEVAVKVFNQQC----------GRAFKSFDVECEVMKSI-RHRNIIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 714 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 781 (1002)
.+.|++|.+..++ ..-|+.||||++.+.. +...+++.+|+++|+++ .|+||+++++++.++. ..
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~----~~ 317 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ----SG 317 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS----EE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC----EE
Confidence 5667777777664 4468999999997541 23346799999999999 7999999999998877 66
Q ss_pred HHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEeccccccccc
Q 037042 782 ALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLT 861 (1002)
Q Consensus 782 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 861 (1002)
||||||++||+|.+++.+.+ .++.. +|+.||+.||+|+| +++||||||||+|||++++|.+||+|||+|+...
T Consensus 318 yLVMEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 318 WLVMEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EEEEECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EEEEecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 89999999999999998765 35543 58999999999999 9999999999999999999999999999998765
Q ss_pred CCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCC
Q 037042 862 REDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPT 912 (1002)
Q Consensus 862 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~ 912 (1002)
.... .....+||++|||||++.+ .+..++|+||+|++++++.++..|+
T Consensus 391 ~~~~--~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 391 QDCS--WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ---C--CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCCc--cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 4322 2244579999999999765 5678899999999988877665553
No 325
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=3.3e-29 Score=303.36 Aligned_cols=376 Identities=16% Similarity=0.174 Sum_probs=217.5
Q ss_pred cCCCCCceEEcccccCCCCCccccc-cccccceeeeccc-cccccccchhhHHhhhchhhcccCCcccCCCCccccCccc
Q 037042 147 SNCTYLRILRLSYNDFAGGIPKEIG-NLTKLEELYLSFN-GLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRN 224 (1002)
Q Consensus 147 ~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~ 224 (1002)
..+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. .++..+.++++
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~------------------------~l~~~~~~~~~ 157 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTD------------------------GLAAIAATCRN 157 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHH------------------------HHHHHHHHCTT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHH------------------------HHHHHHHhCCC
Confidence 4566677777777766655555554 5667777777766 33310 12233345667
Q ss_pred cceeeccCcccccccccccc----cccccceeecccCCCccccCCccccCCCccchhhcccccccc-cccccccccCCCC
Q 037042 225 LEVLALGLNKLVGVIPAEIF----NMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSG-SIPNFIFNASKLS 299 (1002)
Q Consensus 225 L~~L~L~~N~l~~~~p~~~~----~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~ 299 (1002)
|++|+|++|.+++..+..+. .+++|+.|++++|. +. ++. .++..+.++++|+
T Consensus 158 L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~--~~---------------------~~~~~l~~l~~~~~~L~ 214 (594)
T 2p1m_B 158 LKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA--SE---------------------VSFSALERLVTRCPNLK 214 (594)
T ss_dssp CCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC--SC---------------------CCHHHHHHHHHHCTTCC
T ss_pred CCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC--Cc---------------------CCHHHHHHHHHhCCCCc
Confidence 77777777766654433332 23344444444443 00 100 0111122345555
Q ss_pred eeecCCC-ccCCCCccccccccccchhccc-------cccCccchhhhhhhcccCCCCCCcEE-eCCCCCCCCccccccc
Q 037042 300 RLELQKN-SFSGFIPSTFGNLRNLKRLGLN-------NNHLTSLTLELSFLSSLSNCKYLEFI-DLSSNSIDGILSRKSV 370 (1002)
Q Consensus 300 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~-------~N~l~~l~~~~~~~~~l~~l~~L~~L-~Ls~N~l~~~~~~~~~ 370 (1002)
+|+|++| .+.+ +|..+.++++|++|+++ .|.+..++. .+.++++|+.| .+......
T Consensus 215 ~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~------~l~~~~~L~~Ls~~~~~~~~-------- 279 (594)
T 2p1m_B 215 SLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSV------ALSGCKELRCLSGFWDAVPA-------- 279 (594)
T ss_dssp EEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHH------HHHTCTTCCEEECCBTCCGG--------
T ss_pred EEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHH------HHhcCCCcccccCCcccchh--------
Confidence 5555555 3332 44455555555555533 333333332 35566777766 33222111
Q ss_pred ccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccC-CccccCCCCCCEEEccCCccccc-CCccccCCcc
Q 037042 371 GNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSI-PITLGKLQKLQVLYFPDNKLEGS-IPDEVCRLAK 448 (1002)
Q Consensus 371 ~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~ 448 (1002)
.+|..+..+++|++|+|++|.+++.. +..+..+++|+.|++++| +... ++.....+++
T Consensus 280 -------------------~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~ 339 (594)
T 2p1m_B 280 -------------------YLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKD 339 (594)
T ss_dssp -------------------GGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTT
T ss_pred -------------------hHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCC
Confidence 12222334455555555555544321 122345566666666655 3211 1222223556
Q ss_pred ccEEEc---------cCCcCCccCCcccc-CCccCcccccccccccccCCcccc-ccccCceeecc--C----CCCCCCC
Q 037042 449 VYQLDL---------SNNKLSGSIPACFG-DLASLRNLSLASNELISVIPSTFW-NLKDILYLNLS--S----NSLTGPL 511 (1002)
Q Consensus 449 L~~L~L---------s~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls--~----N~l~~~~ 511 (1002)
|+.|+| +.|.+++.....+. .+++|+.|.++.|.+++.....+. .+++|+.|+++ + |.+++..
T Consensus 340 L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~ 419 (594)
T 2p1m_B 340 LRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEP 419 (594)
T ss_dssp CCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCC
T ss_pred CCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCc
Confidence 666666 33455433222332 478888888888888776555555 58899999999 4 5666322
Q ss_pred c-----ccccccccceeeeCCCCccCccCcccccC-CccccEEEccCeeecccCCccc-ccccccceeccccccccCCCc
Q 037042 512 P-----LEIGNLKVLVKIDFSMNNFSGVIPNAIGG-IKDLQFLFLEYNILQGSIPDSF-GDLMSLKSLNLSNNNLSGSIP 584 (1002)
Q Consensus 512 ~-----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p 584 (1002)
. ..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+
T Consensus 420 ~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~ 498 (594)
T 2p1m_B 420 LDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKAL 498 (594)
T ss_dssp THHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHH
T ss_pred hhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHH
Confidence 1 2266789999999987 777666666665 8999999999999987666555 668999999999999975444
Q ss_pred c-cccCCCccceeeCCCCcCcc
Q 037042 585 V-SLEKLSYLKDLNLSFNKLEG 605 (1002)
Q Consensus 585 ~-~~~~l~~L~~L~Ls~N~l~~ 605 (1002)
. ....+++|+.|++++|+++.
T Consensus 499 ~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 499 LANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp HHTGGGGGGSSEEEEESSCCBH
T ss_pred HHHHHhCCCCCEEeeeCCCCCH
Confidence 4 34568999999999999853
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=2e-25 Score=242.00 Aligned_cols=210 Identities=23% Similarity=0.247 Sum_probs=184.0
Q ss_pred cccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEE
Q 037042 374 SHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLD 453 (1002)
Q Consensus 374 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 453 (1002)
+++|+.|++++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+.++++|++|+
T Consensus 27 ~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 34677778888888777777889999999999999999988888899999999999999999988888899999999999
Q ss_pred ccCCcCCccCCccccCCccCccccccccccccc-CCccccccccCceeeccCCCCCCCCcccccccccce----eeeCCC
Q 037042 454 LSNNKLSGSIPACFGDLASLRNLSLASNELISV-IPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLV----KIDFSM 528 (1002)
Q Consensus 454 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~Ls~ 528 (1002)
+++|++++..+..|+.+++|++|++++|++.+. +|..|.++++|++|++++|++++..+..+..+++|+ .|++++
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~ 186 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCS
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCC
Confidence 999999988777899999999999999999875 488999999999999999999988778888887777 899999
Q ss_pred CccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCc
Q 037042 529 NNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIP 584 (1002)
Q Consensus 529 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 584 (1002)
|.+++..+..+... +|+.|+|++|++++..+..|..+++|+.|+|++|++++..|
T Consensus 187 n~l~~~~~~~~~~~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 187 NPMNFIQPGAFKEI-RLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp SCCCEECTTSSCSC-CEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CcccccCccccCCC-cccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 99998777766654 89999999999998777788999999999999999986543
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=6e-25 Score=237.23 Aligned_cols=205 Identities=25% Similarity=0.281 Sum_probs=139.5
Q ss_pred ccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCccccccc
Q 037042 401 LIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLAS 480 (1002)
Q Consensus 401 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 480 (1002)
.+.+++++|+++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|+++...+..|..+++|++|++++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 444555555555 2333332 3556666666666555555566666666666666666655555566666666666666
Q ss_pred ccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCC
Q 037042 481 NELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIP 560 (1002)
Q Consensus 481 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 560 (1002)
|++.++.+..|.++++|++|++++|++++..+..|..+++|+.|+|++|.|++..+..|..+++|+.|+|++|++++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 66666666666677777777777777776666667777777777777777776666667777788888888888877666
Q ss_pred cccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCC
Q 037042 561 DSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608 (1002)
Q Consensus 561 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 608 (1002)
..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+..+
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred hHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 677778888888888888876666667778888888888888876554
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=1.8e-25 Score=241.59 Aligned_cols=188 Identities=26% Similarity=0.299 Sum_probs=115.4
Q ss_pred cCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCc
Q 037042 395 IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474 (1002)
Q Consensus 395 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 474 (1002)
+..+++|++|++++|++++. ..+..+++|++|+|++|.+++..+..+..+++|++|+|++|++++..+..|+.+++|+
T Consensus 59 l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 136 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136 (272)
T ss_dssp GGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCC
Confidence 44555666666666666542 3455666666666666666655555556666666666666666655555566666666
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
+|++++|++++..+..|.++++|++|++++|++++..+..+..+++|+.|++++|++++..|..|..+++|+.|+|++|.
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 216 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCC
Confidence 66666666666555556666666666666666665555556666666666666666666666666666666666666666
Q ss_pred ecccCCcccccccccceeccccccccCCCcccccCCC
Q 037042 555 LQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLS 591 (1002)
Q Consensus 555 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 591 (1002)
+.+. +++|+.|+++.|+++|.+|..+..+.
T Consensus 217 ~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 217 WDCT-------CPGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp BCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred cccc-------CcHHHHHHHHHHhCCCcccCcccccC
Confidence 6543 23466666666666666666555443
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.8e-25 Score=241.47 Aligned_cols=168 Identities=25% Similarity=0.276 Sum_probs=117.6
Q ss_pred ccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccC
Q 037042 394 EIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473 (1002)
Q Consensus 394 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 473 (1002)
.+..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|++++..+..|..+++|
T Consensus 80 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 159 (272)
T 3rfs_A 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNL 159 (272)
T ss_dssp GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccC
Confidence 34455556666666666665555556666666666666666665555556666667777777777666666666777777
Q ss_pred cccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCe
Q 037042 474 RNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYN 553 (1002)
Q Consensus 474 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 553 (1002)
+.|++++|++++..+..|.++++|++|++++|++++..+..+..+++|+.|++++|.+.+. +++|+.|+++.|
T Consensus 160 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n 232 (272)
T 3rfs_A 160 TELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWIN 232 (272)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHH
T ss_pred CEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHH
Confidence 7777777777776666677777777777777777776666677778888888888877644 446888888888
Q ss_pred eecccCCcccccccc
Q 037042 554 ILQGSIPDSFGDLMS 568 (1002)
Q Consensus 554 ~l~~~~p~~~~~l~~ 568 (1002)
.++|.+|..++.+..
T Consensus 233 ~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 233 KHSGVVRNSAGSVAP 247 (272)
T ss_dssp HTGGGBBCTTSCBCG
T ss_pred hCCCcccCcccccCC
Confidence 888888888777654
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.6e-24 Score=235.88 Aligned_cols=205 Identities=22% Similarity=0.213 Sum_probs=159.1
Q ss_pred cCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCc
Q 037042 395 IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474 (1002)
Q Consensus 395 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 474 (1002)
+.++++++++++++|+++. +|..+. ++++.|+|++|.+++..+..|..+++|+.|+|++|.|++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 5566777777777777773 444443 5677777777777777777777777788888888877754332 6777788
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
.|+|++|++.. +|..+.++++|++|++++|++++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~~-l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCCc-CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 88888888774 46677788888888888888887777778888888888888888888777788888888888888888
Q ss_pred ecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCccc
Q 037042 555 LQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGE 606 (1002)
Q Consensus 555 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 606 (1002)
|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.++|++|+|.+.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 88766677788888888888888888 6777777788888888888888764
No 331
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.92 E-value=1.7e-24 Score=230.90 Aligned_cols=191 Identities=24% Similarity=0.279 Sum_probs=166.5
Q ss_pred CCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccC
Q 037042 39 SFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIP 118 (1002)
Q Consensus 39 ~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip 118 (1002)
+||.|.|++|... .+.+++++++++ .+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|+|++ ++
T Consensus 3 ~Cp~~~gC~C~~~---~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~ 75 (251)
T 3m19_A 3 TCETVTGCTCNEG---KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT-LS 75 (251)
T ss_dssp -CHHHHSSEEEGG---GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCC-CC
T ss_pred cCCCCCceEcCCC---CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCc-cC
Confidence 6889999999743 447899999998 7888776 699999999999999888899999999999999999985 66
Q ss_pred cccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHh
Q 037042 119 TNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIF 198 (1002)
Q Consensus 119 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 198 (1002)
...+..+++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++.
T Consensus 76 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--------- 146 (251)
T 3m19_A 76 AGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI--------- 146 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC---------
T ss_pred HhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCcc---------
Confidence 66678899999999999999988888899999999999999999977777789999999999999999842
Q ss_pred hhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCcc
Q 037042 199 VKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSG 261 (1002)
Q Consensus 199 ~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 261 (1002)
.|..++.+++|++|+|++|++++..+..+..+++|+.|+|++|++.+
T Consensus 147 ----------------~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 147 ----------------PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp ----------------CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred ----------------CHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 23468889999999999999998888788888888888888888764
No 332
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=1.7e-25 Score=264.03 Aligned_cols=186 Identities=16% Similarity=0.126 Sum_probs=143.6
Q ss_pred CCCceeeccCcceEEEEEeCCCcEEEEEEeecccc--------hhHHHHHHHHHHHHhccCCCcceeeeEEecCchhhHH
Q 037042 709 SENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCG--------RAFKSFDVECEVMKSIRHRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 709 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 780 (1002)
...++||+|+||+||+|+. .++.+|+|+...... ...+.+.+|++++++++||||+++..++...+ .
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~----~ 413 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD----N 413 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT----T
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC----c
Confidence 4457899999999999954 478899998643211 12355789999999999999995555554444 3
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccc
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
.++||||+++|+|.+++.. +..++.|+++||+||| +++|+||||||+|||++. .+||+|||+|+..
T Consensus 414 ~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 414 KRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp TEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred cEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 4799999999999999976 4589999999999999 899999999999999998 9999999999987
Q ss_pred cCCCcee-----eeccCCCCcccccccccCC--CCcCcccchHHHHHHHHHHHhCCCCCc
Q 037042 861 TREDQFV-----TQTQTPATIGYMALEYGSE--GRVSTNGDVYNFGVMLMETFTGKKPTN 913 (1002)
Q Consensus 861 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~P~~ 913 (1002)
....... ......||+.|||||++.. ..|+...|+||.++-..+-+.++.+|.
T Consensus 480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 6532211 1134568999999999876 568889999999999999888887764
No 333
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=1.8e-23 Score=227.57 Aligned_cols=203 Identities=22% Similarity=0.227 Sum_probs=104.6
Q ss_pred cCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCC
Q 037042 345 LSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQK 424 (1002)
Q Consensus 345 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 424 (1002)
+.++++++++++++|.++.++. .++++++.|+|++|++++..|..|..+++|++|+|++|+|++..+. +.+++
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~-----~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~ 78 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPP-----DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPV 78 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCS-----CCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTT
T ss_pred ccccCCccEEECCCCCCCcCCC-----CCCCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCc
Confidence 3445555555555555554321 1123455555555555544555556666666666666666543322 45555
Q ss_pred CCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccC
Q 037042 425 LQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSS 504 (1002)
Q Consensus 425 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 504 (1002)
|++|+|++|+++ .+|..+..+++|++|+|++|+|+ ++.+..|.++++|++|+|++
T Consensus 79 L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~------------------------~l~~~~~~~l~~L~~L~L~~ 133 (290)
T 1p9a_G 79 LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT------------------------SLPLGALRGLGELQELYLKG 133 (290)
T ss_dssp CCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCC------------------------CCCSSTTTTCTTCCEEECTT
T ss_pred CCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCc------------------------ccCHHHHcCCCCCCEEECCC
Confidence 555555555554 34444444555555555555554 44444444455555555555
Q ss_pred CCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceecccccccc
Q 037042 505 NSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLS 580 (1002)
Q Consensus 505 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 580 (1002)
|++++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++.
T Consensus 134 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 134 NELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 5555444444455555555555555555444444555555555555555555 34444555555555555555554
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=7.9e-24 Score=224.03 Aligned_cols=204 Identities=17% Similarity=0.168 Sum_probs=165.8
Q ss_pred ccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccc-cccccCcccCCCCCCCCEEeCCC-CcccccCCcc
Q 037042 68 TIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQ-LSGEIPTNICSNLPFFESLNLSK-NMFHGGIPSA 145 (1002)
Q Consensus 68 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~ip~~~~~~l~~L~~L~Ls~-N~l~~~~p~~ 145 (1002)
.+|. +.. +|++|+|++|++++..+..|.++++|++|+|++|+ ++ .+|...|.++++|++|+|++ |++++..+..
T Consensus 25 ~ip~-~~~--~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~ 100 (239)
T 2xwt_C 25 RIPS-LPP--STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDA 100 (239)
T ss_dssp SCCC-CCT--TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTS
T ss_pred ccCC-CCC--cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHH
Confidence 5666 443 89999999999997777789999999999999997 66 67777778899999999998 9999777788
Q ss_pred ccCCCCCceEEcccccCCCCCccccccccccc---eeeeccc-cccccccchhhHHhhhchhhcccCCcccCCCCccccC
Q 037042 146 LSNCTYLRILRLSYNDFAGGIPKEIGNLTKLE---ELYLSFN-GLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGN 221 (1002)
Q Consensus 146 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~ 221 (1002)
|.++++|++|+|++|++++ +|. |.++++|+ +|++++| +++++ .+..|.+
T Consensus 101 f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i-------------------------~~~~~~~ 153 (239)
T 2xwt_C 101 LKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSI-------------------------PVNAFQG 153 (239)
T ss_dssp EECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEE-------------------------CTTTTTT
T ss_pred hCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhc-------------------------Ccccccc
Confidence 9999999999999999985 776 88888888 9999999 88742 2345788
Q ss_pred ccccc-eeeccCcccccccccccccccccceeecccCC-CccccCCccccCC-CccchhhcccccccccccccccccCCC
Q 037042 222 LRNLE-VLALGLNKLVGVIPAEIFNMSTIQGVGLQNNS-LSGSLQSIPYVRL-PNLEELYLWGNHFSGSIPNFIFNASKL 298 (1002)
Q Consensus 222 l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L 298 (1002)
+++|+ +|++++|+++. +|...+..++|+.|+|++|+ ++ .++...|..+ ++|++|+|++|++++..+. .+++|
T Consensus 154 l~~L~~~L~l~~n~l~~-i~~~~~~~~~L~~L~L~~n~~l~-~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L 228 (239)
T 2xwt_C 154 LCNETLTLKLYNNGFTS-VQGYAFNGTKLDAVYLNKNKYLT-VIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHL 228 (239)
T ss_dssp TBSSEEEEECCSCCCCE-ECTTTTTTCEEEEEECTTCTTCC-EECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTC
T ss_pred hhcceeEEEcCCCCCcc-cCHhhcCCCCCCEEEcCCCCCcc-cCCHHHhhccccCCcEEECCCCccccCChh---HhccC
Confidence 99999 99999999984 45544444889999999995 87 5555667788 9999999999999854443 57789
Q ss_pred CeeecCCCc
Q 037042 299 SRLELQKNS 307 (1002)
Q Consensus 299 ~~L~L~~N~ 307 (1002)
+.|+++++.
T Consensus 229 ~~L~l~~~~ 237 (239)
T 2xwt_C 229 KELIARNTW 237 (239)
T ss_dssp SEEECTTC-
T ss_pred ceeeccCcc
Confidence 999998763
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=2.8e-25 Score=250.67 Aligned_cols=266 Identities=18% Similarity=0.182 Sum_probs=183.8
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCC----ccccccc-CCcEEEecccccccccCcccCC---C-CCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIP----FSIFNIH-TLKLLSFGDNQLSGEIPTNICS---N-LPF 127 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~ip~~~~~---~-l~~ 127 (1002)
.++|++|+++|.+|..+...++|++|+|++|.+++..+ ..+.+++ +|++|+|++|++.+..+..+.. . .++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35788899999888888888889999999999987666 6777787 8889999988888655544322 1 278
Q ss_pred CCEEeCCCCcccccCCccccC----C-CCCceEEcccccCCCCCcccccc-----ccccceeeeccccccccccchhhHH
Q 037042 128 FESLNLSKNMFHGGIPSALSN----C-TYLRILRLSYNDFAGGIPKEIGN-----LTKLEELYLSFNGLQGAYDHGFLQI 197 (1002)
Q Consensus 128 L~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~~~~~~~~~ 197 (1002)
|++|+|++|++++..+..++. + ++|++|+|++|++++..+..+.. .++|++|+|++|++++....
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~----- 156 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSD----- 156 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHH-----
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHH-----
Confidence 888888888888766664444 3 78888888888887666554433 25888888888888743211
Q ss_pred hhhchhhcccCCcccCCCCccccCcc-ccceeeccCcccccccccccccccccceeecccCCCccccCCccccCC-Cccc
Q 037042 198 FVKNIFVQFSHNFSKCEIPNEIGNLR-NLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRL-PNLE 275 (1002)
Q Consensus 198 ~~~~~~~~~~~n~~~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l-~~L~ 275 (1002)
.++..+..++ +|++|+|++|++++..+..+... +... ++|+
T Consensus 157 ----------------~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~---------------------l~~~~~~L~ 199 (362)
T 3goz_A 157 ----------------ELIQILAAIPANVNSLNLRGNNLASKNCAELAKF---------------------LASIPASVT 199 (362)
T ss_dssp ----------------HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHH---------------------HHTSCTTCC
T ss_pred ----------------HHHHHHhcCCccccEeeecCCCCchhhHHHHHHH---------------------HHhCCCCCC
Confidence 2334444454 78888888888877666544432 0112 2455
Q ss_pred hhhccccccccc----ccccccc-cCCCCeeecCCCccCCCCc----cccccccccchhccccccCccchhhh--hhhcc
Q 037042 276 ELYLWGNHFSGS----IPNFIFN-ASKLSRLELQKNSFSGFIP----STFGNLRNLKRLGLNNNHLTSLTLEL--SFLSS 344 (1002)
Q Consensus 276 ~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~l~~~~--~~~~~ 344 (1002)
+|+|++|++++. ++..+.. .++|++|+|++|.|++..+ ..+..+++|++|+|++|.+..+..+. .....
T Consensus 200 ~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~ 279 (362)
T 3goz_A 200 SLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAA 279 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTT
T ss_pred EEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHH
Confidence 555555555432 3444544 3478888888888877654 33566788888888888866554431 22345
Q ss_pred cCCCCCCcEEeCCCCCCCCc
Q 037042 345 LSNCKYLEFIDLSSNSIDGI 364 (1002)
Q Consensus 345 l~~l~~L~~L~Ls~N~l~~~ 364 (1002)
+..+++|+.||+++|.+...
T Consensus 280 ~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 280 FPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp STTCCEEEEECTTSCBCCGG
T ss_pred hccCCceEEEecCCCcCCCc
Confidence 77888999999999998765
No 336
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=2.7e-25 Score=248.51 Aligned_cols=191 Identities=15% Similarity=0.201 Sum_probs=148.3
Q ss_pred CCCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCC--CCCCEEEcccCCCCCCCCcccccccCCcEEEecccccc
Q 037042 37 SISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNL--SSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLS 114 (1002)
Q Consensus 37 ~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 114 (1002)
+.-|.+|.++.|+. ..++.+|++++.+. |..+..+ ++++.|++++|.+++..|. +..+++|++|+|++|.++
T Consensus 33 ~~vc~~W~~~~~~~--~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~ 106 (336)
T 2ast_B 33 SGVCKRWYRLASDE--SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIE 106 (336)
T ss_dssp TSSCHHHHHHHTCS--TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEEC
T ss_pred HHHHHHHHHHhcCc--hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcC
Confidence 34456899999874 35789999999887 5667777 8999999999999977665 667899999999999987
Q ss_pred cc-cCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccc-cCCC-CCccccccccccceeeeccc-cccccc
Q 037042 115 GE-IPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYN-DFAG-GIPKEIGNLTKLEELYLSFN-GLQGAY 190 (1002)
Q Consensus 115 ~~-ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~-~~p~~~~~l~~L~~L~Ls~N-~l~~~~ 190 (1002)
+. +|.. +..+++|++|+|++|.+++..|..++++++|++|+|++| .+++ .+|..+.++++|++|+|++| .+++.
T Consensus 107 ~~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~- 184 (336)
T 2ast_B 107 VSTLHGI-LSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK- 184 (336)
T ss_dssp HHHHHHH-HTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH-
T ss_pred HHHHHHH-HhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH-
Confidence 65 5544 467899999999999998888888888999999999999 6775 36777888889999999998 87641
Q ss_pred cchhhHHhhhchhhcccCCcccCCCCccccCcc-ccceeeccCc--ccc-cccccccccccccceeecccCC
Q 037042 191 DHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLR-NLEVLALGLN--KLV-GVIPAEIFNMSTIQGVGLQNNS 258 (1002)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~-~L~~L~L~~N--~l~-~~~p~~~~~l~~L~~L~L~~N~ 258 (1002)
.+|..+..++ +|++|++++| .++ +.+|..+..+++|+.|++++|.
T Consensus 185 -----------------------~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~ 233 (336)
T 2ast_B 185 -----------------------HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSV 233 (336)
T ss_dssp -----------------------HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCT
T ss_pred -----------------------HHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCC
Confidence 1445567778 8888888888 444 3455555566666666666665
No 337
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=4.4e-23 Score=231.45 Aligned_cols=245 Identities=18% Similarity=0.147 Sum_probs=175.8
Q ss_pred CcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcc
Q 037042 41 CNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTN 120 (1002)
Q Consensus 41 c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~ 120 (1002)
|+|..|.|. +++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|..
T Consensus 9 C~~~~v~C~------------~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 9 CSNRVFLCQ------------ESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp EETTEEEEE------------STTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred eeCCEEEec------------CCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 566666664 45666 678776 368999999999999544567999999999999999998889999
Q ss_pred cCCCCCCCCE-EeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeecc-ccccccccchhhHHh
Q 037042 121 ICSNLPFFES-LNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSF-NGLQGAYDHGFLQIF 198 (1002)
Q Consensus 121 ~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~~~ 198 (1002)
.|.++++|++ +++++|++++..|..|.++++|++|++++|++++..+..+....++..|++++ |+++.+.
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~-------- 145 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIE-------- 145 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEEC--------
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccc--------
Confidence 9999998875 66778999988888999999999999999999877667777888888888865 5565321
Q ss_pred hhchhhcccCCcccCCCCccccCc-cccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchh
Q 037042 199 VKNIFVQFSHNFSKCEIPNEIGNL-RNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEEL 277 (1002)
Q Consensus 199 ~~~~~~~~~~n~~~~~~p~~l~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 277 (1002)
+..+..+ ..|++|+|++|+|+.+ |...+...+|+.|++++|
T Consensus 146 -----------------~~~f~~~~~~l~~L~L~~N~i~~i-~~~~f~~~~L~~l~l~~~-------------------- 187 (350)
T 4ay9_X 146 -----------------RNSFVGLSFESVILWLNKNGIQEI-HNSAFNGTQLDELNLSDN-------------------- 187 (350)
T ss_dssp -----------------TTSSTTSBSSCEEEECCSSCCCEE-CTTSSTTEEEEEEECTTC--------------------
T ss_pred -----------------ccchhhcchhhhhhccccccccCC-ChhhccccchhHHhhccC--------------------
Confidence 2334444 3578888888888753 444444445555555432
Q ss_pred hcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCC
Q 037042 278 YLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLS 357 (1002)
Q Consensus 278 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls 357 (1002)
|.++...+..|.++++|++|+|++|+|+.+.+..|.++++|+.+++ +.++.+| ++.++++|+.++++
T Consensus 188 ----n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~~lP-------~l~~l~~L~~l~l~ 254 (350)
T 4ay9_X 188 ----NNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKLP-------TLEKLVALMEASLT 254 (350)
T ss_dssp ----TTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCCCCC-------CTTTCCSCCEEECS
T ss_pred ----CcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcCcCC-------CchhCcChhhCcCC
Confidence 3344333345666777777777777777666666777777766655 3455554 25667777777776
Q ss_pred CC
Q 037042 358 SN 359 (1002)
Q Consensus 358 ~N 359 (1002)
++
T Consensus 255 ~~ 256 (350)
T 4ay9_X 255 YP 256 (350)
T ss_dssp CH
T ss_pred CC
Confidence 54
No 338
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=7.9e-24 Score=249.49 Aligned_cols=215 Identities=22% Similarity=0.296 Sum_probs=167.1
Q ss_pred CCCCCCCCC-----ccccc-EeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEE
Q 037042 33 NWNSSISFC-----NWTGV-TCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLL 106 (1002)
Q Consensus 33 ~w~~~~~~c-----~w~gv-~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 106 (1002)
+|..+.++| .|.|+ .|.. ++++.|+|++|++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L 105 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYL 105 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEE
Confidence 577677778 79999 7875 479999999999996 888774 89999999999999 788 457899999
Q ss_pred EecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccc
Q 037042 107 SFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGL 186 (1002)
Q Consensus 107 ~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 186 (1002)
+|++|+|++ ||. +. . +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|
T Consensus 106 ~Ls~N~l~~-ip~-l~-~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 106 DACDNRLST-LPE-LP-A--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQL 172 (571)
T ss_dssp ECCSSCCSC-CCC-CC-T--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred EccCCCCCC-cch-hh-c--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCC
Confidence 999999986 887 43 3 88999999999986 666 67889999999999885 665 567888888888888
Q ss_pred cccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCc
Q 037042 187 QGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSI 266 (1002)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 266 (1002)
++ +|. |. ++|++|+|++|+|+ .+|. +.. +|
T Consensus 173 ~~--------------------------lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L----------------- 202 (571)
T 3cvr_A 173 TF--------------------------LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RN----------------- 202 (571)
T ss_dssp SC--------------------------CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------------------
T ss_pred CC--------------------------cch-hh--CCCCEEECcCCCCC-chhh-HHH--hh-----------------
Confidence 74 455 44 78888888888887 3444 332 22
Q ss_pred cccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccc
Q 037042 267 PYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRN 321 (1002)
Q Consensus 267 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 321 (1002)
+...+.|++|+|++|+|+ .+|..++.+++|+.|+|++|.|++.+|..|+.++.
T Consensus 203 -~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 203 -HHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp ------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred -hcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 112244588888888887 57777888999999999999999888888877654
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=2.1e-23 Score=220.79 Aligned_cols=196 Identities=20% Similarity=0.247 Sum_probs=129.8
Q ss_pred CccEEEccCCccCccCCccccCCCCCCEEEccCCc-ccccCCccccCCccccEEEccC-CcCCccCCccccCCccCcccc
Q 037042 400 NLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNK-LEGSIPDEVCRLAKVYQLDLSN-NKLSGSIPACFGDLASLRNLS 477 (1002)
Q Consensus 400 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ 477 (1002)
+|++|++++|++++..+..|.++++|++|++++|+ +++..+..|.++++|++|+|++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666666666666655566666666666666665 6655555666666666677766 666666566666667777777
Q ss_pred cccccccccCCccccccccCc---eeeccCC-CCCCCCcccccccccce-eeeCCCCccCccCcccccCCccccEEEccC
Q 037042 478 LASNELISVIPSTFWNLKDIL---YLNLSSN-SLTGPLPLEIGNLKVLV-KIDFSMNNFSGVIPNAIGGIKDLQFLFLEY 552 (1002)
Q Consensus 478 L~~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 552 (1002)
+++|++++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ .|++++|+++.+.+..|.. .+|+.|+|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 77777666 333 66666666 7777777 67665556677777777 7777777777544445554 6777777777
Q ss_pred ee-ecccCCcccccc-cccceeccccccccCCCcccccCCCccceeeCCCC
Q 037042 553 NI-LQGSIPDSFGDL-MSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFN 601 (1002)
Q Consensus 553 N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 601 (1002)
|+ +++..+..|..+ ++|+.|+|++|+|++ +|.. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 74 776666677777 777777777777774 3333 4566777777665
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=5.1e-23 Score=219.45 Aligned_cols=159 Identities=25% Similarity=0.296 Sum_probs=88.8
Q ss_pred cccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCC
Q 037042 448 KVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFS 527 (1002)
Q Consensus 448 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 527 (1002)
+++.|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 34444444444444444444444555555555555554444445555555555555555554444455555555555555
Q ss_pred CCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCccc
Q 037042 528 MNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGE 606 (1002)
Q Consensus 528 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 606 (1002)
+|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 5555555555555566666666666666655555566666666666666666655555566666666666666666654
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=8.7e-24 Score=233.09 Aligned_cols=202 Identities=20% Similarity=0.238 Sum_probs=113.2
Q ss_pred cccEEecCCCCCCCCCCccc--CCCCCccEEEccCCccCccCC----ccccCCCCCCEEEccCCcccccCCccccCCccc
Q 037042 376 SLKIFDMSDCNVSGSIPEEI--GNLTNLIGFYLGGNNLNGSIP----ITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKV 449 (1002)
Q Consensus 376 ~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 449 (1002)
+|++|++++|++++..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|++++..|..+..+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 46777777777776666666 666667777777776665443 233456666666666666665555566666666
Q ss_pred cEEEccCCcCCcc---C-CccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcc-cccccccceee
Q 037042 450 YQLDLSNNKLSGS---I-PACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPL-EIGNLKVLVKI 524 (1002)
Q Consensus 450 ~~L~Ls~N~l~~~---~-p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L 524 (1002)
++|+|++|++.+. . +..+..+++|++|+|++|+++...+. +. .++.+++|++|
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~----------------------~~~l~~~l~~L~~L 229 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGV----------------------CAALAAAGVQPHSL 229 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHH----------------------HHHHHHHTCCCSSE
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHH----------------------HHHHHhcCCCCCEE
Confidence 6666666665431 1 12234455555555555555422111 00 12344445555
Q ss_pred eCCCCccCccCcccccCC---ccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCC
Q 037042 525 DFSMNNFSGVIPNAIGGI---KDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFN 601 (1002)
Q Consensus 525 ~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 601 (1002)
||++|+|++..|..+..+ ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++|
T Consensus 230 ~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N 304 (310)
T 4glp_A 230 DLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGN 304 (310)
T ss_dssp ECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSST
T ss_pred ECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCC
Confidence 555555554444444444 46666666666666 4454443 5666666666666643 32 455666777777777
Q ss_pred cCc
Q 037042 602 KLE 604 (1002)
Q Consensus 602 ~l~ 604 (1002)
+|+
T Consensus 305 ~l~ 307 (310)
T 4glp_A 305 PFL 307 (310)
T ss_dssp TTS
T ss_pred CCC
Confidence 765
No 342
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.2e-24 Score=245.57 Aligned_cols=231 Identities=19% Similarity=0.194 Sum_probs=142.4
Q ss_pred ccEEecCCCCCCCCCC----cccCCCC-CccEEEccCCccCccCCccccCC-----CCCCEEEccCCcccccCCccccC-
Q 037042 377 LKIFDMSDCNVSGSIP----EEIGNLT-NLIGFYLGGNNLNGSIPITLGKL-----QKLQVLYFPDNKLEGSIPDEVCR- 445 (1002)
Q Consensus 377 L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~- 445 (1002)
|+.|+|++|++++..+ ..|..++ +|++|+|++|++++..+..+..+ ++|++|+|++|++++..+..+..
T Consensus 24 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 103 (362)
T 3goz_A 24 VTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKT 103 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH
T ss_pred ceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHH
Confidence 4444444444443333 4455555 66666666666665555555553 66777777777766555543332
Q ss_pred ---C-ccccEEEccCCcCCccCCcccc----C-CccCcccccccccccccCCc----cccccc-cCceeeccCCCCCCCC
Q 037042 446 ---L-AKVYQLDLSNNKLSGSIPACFG----D-LASLRNLSLASNELISVIPS----TFWNLK-DILYLNLSSNSLTGPL 511 (1002)
Q Consensus 446 ---l-~~L~~L~Ls~N~l~~~~p~~~~----~-l~~L~~L~L~~N~l~~~~~~----~~~~l~-~L~~L~Ls~N~l~~~~ 511 (1002)
+ ++|++|+|++|+|++..+..+. . .++|++|+|++|++.+..+. .+..++ +|++|+|++|++++..
T Consensus 104 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~ 183 (362)
T 3goz_A 104 LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKN 183 (362)
T ss_dssp HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSC
T ss_pred HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhh
Confidence 3 5677777777777655544432 2 24677777777777643332 333443 7777777777777665
Q ss_pred cccccc----c-ccceeeeCCCCccCcc----CcccccC-CccccEEEccCeeecccCC----cccccccccceeccccc
Q 037042 512 PLEIGN----L-KVLVKIDFSMNNFSGV----IPNAIGG-IKDLQFLFLEYNILQGSIP----DSFGDLMSLKSLNLSNN 577 (1002)
Q Consensus 512 ~~~~~~----l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N 577 (1002)
+..+.. + ++|+.|||++|.|++. ++..+.. .++|+.|+|++|.|++..+ ..+..+++|+.|+|++|
T Consensus 184 ~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n 263 (362)
T 3goz_A 184 CAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYD 263 (362)
T ss_dssp HHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHH
T ss_pred HHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccC
Confidence 544443 3 5777788888877753 3444544 3478888888888876544 33456677888888888
Q ss_pred cccCCC-------cccccCCCccceeeCCCCcCcccC
Q 037042 578 NLSGSI-------PVSLEKLSYLKDLNLSFNKLEGEI 607 (1002)
Q Consensus 578 ~l~~~~-------p~~~~~l~~L~~L~Ls~N~l~~~~ 607 (1002)
.+.+.. +..+..+++|+.|||++|++.+..
T Consensus 264 ~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~ 300 (362)
T 3goz_A 264 IVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSH 300 (362)
T ss_dssp HHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGG
T ss_pred CccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcc
Confidence 855433 335667788888888888887653
No 343
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=2.4e-25 Score=253.84 Aligned_cols=193 Identities=23% Similarity=0.262 Sum_probs=108.9
Q ss_pred cCCCCCceEEcccccCCC----CCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCc
Q 037042 147 SNCTYLRILRLSYNDFAG----GIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNL 222 (1002)
Q Consensus 147 ~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l 222 (1002)
.++++|++|+|++|.+++ .+|..+.++++|++|+|++|.+++..... ++..+..+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~---------------------l~~~l~~l 149 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAK---------------------IARALQEL 149 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHH---------------------HHHHHHHH
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHH---------------------HHHHHHHH
Confidence 455555666666665554 24555555556666666666554211110 11122222
Q ss_pred ---------cccceeeccCcccc-cccc---cccccccccceeecccCCCccc----cCCccccCCCccchhhccccccc
Q 037042 223 ---------RNLEVLALGLNKLV-GVIP---AEIFNMSTIQGVGLQNNSLSGS----LQSIPYVRLPNLEELYLWGNHFS 285 (1002)
Q Consensus 223 ---------~~L~~L~L~~N~l~-~~~p---~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~~l~~L~~L~Ls~N~l~ 285 (1002)
++|++|+|++|+++ +.+| ..+..+++|+.|+|++|+++.. +....+..+++|++|+|++|.++
T Consensus 150 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~ 229 (386)
T 2ca6_A 150 AVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFT 229 (386)
T ss_dssp HHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCH
T ss_pred hhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCC
Confidence 55666666666665 2233 3444555666666666655410 11112345566677777777764
Q ss_pred ----ccccccccccCCCCeeecCCCccCCC----Ccccc--ccccccchhccccccCcc-----chhhhhhhcccCCCCC
Q 037042 286 ----GSIPNFIFNASKLSRLELQKNSFSGF----IPSTF--GNLRNLKRLGLNNNHLTS-----LTLELSFLSSLSNCKY 350 (1002)
Q Consensus 286 ----~~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~--~~l~~L~~L~L~~N~l~~-----l~~~~~~~~~l~~l~~ 350 (1002)
+.+|..+..+++|++|+|++|.|++. ++..+ +.+++|++|+|++|+|+. ++..+ +.++++
T Consensus 230 ~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l-----~~~l~~ 304 (386)
T 2ca6_A 230 HLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVI-----DEKMPD 304 (386)
T ss_dssp HHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHH-----HHHCTT
T ss_pred cHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHH-----HhcCCC
Confidence 45666777777777777777777755 44555 337777777777777776 44322 245677
Q ss_pred CcEEeCCCCCCCCcc
Q 037042 351 LEFIDLSSNSIDGIL 365 (1002)
Q Consensus 351 L~~L~Ls~N~l~~~~ 365 (1002)
|++|+|++|.+++..
T Consensus 305 L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 305 LLFLELNGNRFSEED 319 (386)
T ss_dssp CCEEECTTSBSCTTS
T ss_pred ceEEEccCCcCCcch
Confidence 777777777776543
No 344
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=4.5e-23 Score=227.33 Aligned_cols=204 Identities=16% Similarity=0.126 Sum_probs=143.2
Q ss_pred CCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCC----cccCCCCCccEEEccCCccCccCCccccCC
Q 037042 347 NCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIP----EEIGNLTNLIGFYLGGNNLNGSIPITLGKL 422 (1002)
Q Consensus 347 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 422 (1002)
.+++|++|++++|.+.+..+...+..-..+|++|+|++|++++..+ ..+..+++|++|+|++|++.+..|..|+.+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 3467999999999999877654431335689999999999998766 445689999999999999999999999999
Q ss_pred CCCCEEEccCCccccc--C--CccccCCccccEEEccCCcCCccCCc----cccCCccCcccccccccccccCCcccccc
Q 037042 423 QKLQVLYFPDNKLEGS--I--PDEVCRLAKVYQLDLSNNKLSGSIPA----CFGDLASLRNLSLASNELISVIPSTFWNL 494 (1002)
Q Consensus 423 ~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 494 (1002)
++|++|+|++|++.+. + +..+..+++|++|+|++|+++. ++. .++.+++|++|+|++|++.+..|..+..+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 9999999999998752 2 2345689999999999999973 232 24566777777777777777666655554
Q ss_pred ---ccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeec
Q 037042 495 ---KDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQ 556 (1002)
Q Consensus 495 ---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 556 (1002)
++|++|+|++|+++ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++|+|+
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred cCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 46666666666665 2344332 4455555555555432 11 334444444444444443
No 345
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=1.9e-22 Score=208.49 Aligned_cols=198 Identities=24% Similarity=0.261 Sum_probs=127.3
Q ss_pred CCCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccc
Q 037042 37 SISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGE 116 (1002)
Q Consensus 37 ~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 116 (1002)
....|+|++|.|+.. +++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|+++ .
T Consensus 3 ~~C~C~~~~v~c~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~ 66 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQ------------GRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-S 66 (208)
T ss_dssp TTCEEETTEEECCSS------------CCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-C
T ss_pred CCCEECCCEEEecCC------------Ccc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-c
Confidence 345589999999753 333 445444 357888888888888666666777777777777777776 5
Q ss_pred cCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhH
Q 037042 117 IPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQ 196 (1002)
Q Consensus 117 ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 196 (1002)
+|...|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++.
T Consensus 67 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~------- 139 (208)
T 2o6s_A 67 LPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSV------- 139 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC-------
T ss_pred cChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCcccee-------
Confidence 5666666677777777777777655555566667777777777766655555566666666666666666531
Q ss_pred HhhhchhhcccCCcccCCCCccccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccch
Q 037042 197 IFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEE 276 (1002)
Q Consensus 197 ~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~ 276 (1002)
.+..+..+++|++|+|++|.+.+ .+++|++
T Consensus 140 ------------------~~~~~~~l~~L~~L~l~~N~~~~--------------------------------~~~~l~~ 169 (208)
T 2o6s_A 140 ------------------PDGVFDRLTSLQYIWLHDNPWDC--------------------------------TCPGIRY 169 (208)
T ss_dssp ------------------CTTTTTTCTTCCEEECCSCCBCC--------------------------------CTTTTHH
T ss_pred ------------------CHHHhccCCCccEEEecCCCeec--------------------------------CCCCHHH
Confidence 12224445555555555554332 3467888
Q ss_pred hhcccccccccccccccccCCCCeeecCCCccCCC
Q 037042 277 LYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGF 311 (1002)
Q Consensus 277 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 311 (1002)
|+++.|+++|.+|..++.++. ++..+...+.
T Consensus 170 L~~~~n~~~g~ip~~~~~l~~----~~~~C~~~~~ 200 (208)
T 2o6s_A 170 LSEWINKHSGVVRNSAGSVAP----DSAKCSGSGK 200 (208)
T ss_dssp HHHHHHHCTTTBBCTTSSBCT----TCSBBTTTCC
T ss_pred HHHHHHhCCceeeccCccccC----CccccccCCC
Confidence 888888888888887776554 3444444433
No 346
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=3e-25 Score=252.99 Aligned_cols=264 Identities=20% Similarity=0.237 Sum_probs=151.0
Q ss_pred CeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccccccccccccc
Q 037042 299 SRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLK 378 (1002)
Q Consensus 299 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~ 378 (1002)
+...++...+. .++..+..+++|++|+|++|+|+..... .+...+..+++|++|+|++|.+..+
T Consensus 12 ~~~~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~-~l~~~l~~~~~L~~L~Ls~~~~~~l-------------- 75 (386)
T 2ca6_A 12 KLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAAR-WLSENIASKKDLEIAEFSDIFTGRV-------------- 75 (386)
T ss_dssp EESSCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHH-HHHHTTTTCTTCCEEECCSCCTTSC--------------
T ss_pred ccCCCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHH-HHHHHHHhCCCccEEeCcccccCcc--------------
Confidence 33333333333 3455666777777777777777654321 1122355666777777766654322
Q ss_pred EEecCCCCCCCCCCc-------ccCCCCCccEEEccCCccCc----cCCccccCCCCCCEEEccCCcccccCCccccCCc
Q 037042 379 IFDMSDCNVSGSIPE-------EIGNLTNLIGFYLGGNNLNG----SIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLA 447 (1002)
Q Consensus 379 ~L~L~~N~l~~~~p~-------~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 447 (1002)
++.+|. .+..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+...
T Consensus 76 ---------~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~- 145 (386)
T 2ca6_A 76 ---------KDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA- 145 (386)
T ss_dssp ---------GGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH-
T ss_pred ---------ccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH-
Confidence 222232 23556666666666666665 345555666666666666666653322222221
Q ss_pred cccEEEccCCcCCccCCccccCC---------ccCccccccccccc-ccCC---ccccccccCceeeccCCCCCC-----
Q 037042 448 KVYQLDLSNNKLSGSIPACFGDL---------ASLRNLSLASNELI-SVIP---STFWNLKDILYLNLSSNSLTG----- 509 (1002)
Q Consensus 448 ~L~~L~Ls~N~l~~~~p~~~~~l---------~~L~~L~L~~N~l~-~~~~---~~~~~l~~L~~L~Ls~N~l~~----- 509 (1002)
+..+ ++|++|+|++|++. ...+ ..+..+++|++|++++|+++.
T Consensus 146 -------------------l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~ 206 (386)
T 2ca6_A 146 -------------------LQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEH 206 (386)
T ss_dssp -------------------HHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHH
T ss_pred -------------------HHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHH
Confidence 1111 44555555555554 1222 244455666666666666651
Q ss_pred CCcccccccccceeeeCCCCccC----ccCcccccCCccccEEEccCeeeccc----CCcccc--cccccceeccccccc
Q 037042 510 PLPLEIGNLKVLVKIDFSMNNFS----GVIPNAIGGIKDLQFLFLEYNILQGS----IPDSFG--DLMSLKSLNLSNNNL 579 (1002)
Q Consensus 510 ~~~~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~--~l~~L~~L~Ls~N~l 579 (1002)
..|..+..+++|+.|+|++|.|+ +.+|..+..+++|+.|+|++|.|++. +|..+. .+++|+.|+|++|+|
T Consensus 207 l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i 286 (386)
T 2ca6_A 207 LLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEI 286 (386)
T ss_dssp HHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCC
T ss_pred HHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcC
Confidence 23335666666777777777764 45666677777777777777777654 455553 367777777777777
Q ss_pred cC----CCcccc-cCCCccceeeCCCCcCcccC
Q 037042 580 SG----SIPVSL-EKLSYLKDLNLSFNKLEGEI 607 (1002)
Q Consensus 580 ~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~ 607 (1002)
++ .+|..+ .++++|+.|+|++|++++..
T Consensus 287 ~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 287 ELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp BHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 76 366666 55777888888888777543
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=5.9e-24 Score=237.54 Aligned_cols=258 Identities=16% Similarity=0.185 Sum_probs=178.5
Q ss_pred CCCEEEcccCCCCCCCCcccccc--cCCcEEEecccccccccCcccCCCCCCCCEEeCCCCccccc-CCccccCCCCCce
Q 037042 78 SLQSLFLHSNQFSGSIPFSIFNI--HTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGG-IPSALSNCTYLRI 154 (1002)
Q Consensus 78 ~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~ 154 (1002)
.++.|++++|.+. |..+..+ +++++|++++|.+.+..|. + ..+++|++|+|++|.+++. +|..+.++++|++
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~-~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-H-FSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-C-CCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-h-ccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 4788999998887 5667777 8899999999998876555 3 3588899999999988865 7788888899999
Q ss_pred EEcccccCCCCCccccccccccceeeeccc-cccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCc
Q 037042 155 LRLSYNDFAGGIPKEIGNLTKLEELYLSFN-GLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLN 233 (1002)
Q Consensus 155 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N 233 (1002)
|+|++|++++..|..|+++++|++|+|++| .+++. .+|..+.++++|++|++++|
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~------------------------~l~~~~~~~~~L~~L~l~~~ 178 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEF------------------------ALQTLLSSCSRLDELNLSWC 178 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHH------------------------HHHHHHHHCTTCCEEECCCC
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHH------------------------HHHHHHhcCCCCCEEcCCCC
Confidence 999999888778888888888999998888 56531 14455667788888888888
Q ss_pred -ccccc-ccccccccc-ccceeecccCCCccccCCccccCCCccchhhccccccc-ccccccccccCCCCeeecCCCc-c
Q 037042 234 -KLVGV-IPAEIFNMS-TIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFS-GSIPNFIFNASKLSRLELQKNS-F 308 (1002)
Q Consensus 234 -~l~~~-~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~-l 308 (1002)
++++. ++..+..++ +|++|++++|.+ .++ +.+|..+.++++|++|+|++|. +
T Consensus 179 ~~l~~~~~~~~~~~l~~~L~~L~l~~~~~-----------------------~~~~~~l~~~~~~~~~L~~L~l~~~~~l 235 (336)
T 2ast_B 179 FDFTEKHVQVAVAHVSETITQLNLSGYRK-----------------------NLQKSDLSTLVRRCPNLVHLDLSDSVML 235 (336)
T ss_dssp TTCCHHHHHHHHHHSCTTCCEEECCSCGG-----------------------GSCHHHHHHHHHHCTTCSEEECTTCTTC
T ss_pred CCcChHHHHHHHHhcccCCCEEEeCCCcc-----------------------cCCHHHHHHHHhhCCCCCEEeCCCCCcC
Confidence 77754 455555555 555555555521 222 2345556667778888888777 6
Q ss_pred CCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCC
Q 037042 309 SGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVS 388 (1002)
Q Consensus 309 ~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~ 388 (1002)
++..+..+.++++|++|+|++|. ...+.. +..+..+++|+.|++++| +. ...+..+...++.|++++|+++
T Consensus 236 ~~~~~~~l~~l~~L~~L~l~~~~-~~~~~~---~~~l~~~~~L~~L~l~~~-i~----~~~~~~l~~~l~~L~l~~n~l~ 306 (336)
T 2ast_B 236 KNDCFQEFFQLNYLQHLSLSRCY-DIIPET---LLELGEIPTLKTLQVFGI-VP----DGTLQLLKEALPHLQINCSHFT 306 (336)
T ss_dssp CGGGGGGGGGCTTCCEEECTTCT-TCCGGG---GGGGGGCTTCCEEECTTS-SC----TTCHHHHHHHSTTSEESCCCSC
T ss_pred CHHHHHHHhCCCCCCEeeCCCCC-CCCHHH---HHHHhcCCCCCEEeccCc-cC----HHHHHHHHhhCcceEEecccCc
Confidence 66666777777888888888775 111111 123566788888888877 32 2222333334555556666666
Q ss_pred CCCCcccC
Q 037042 389 GSIPEEIG 396 (1002)
Q Consensus 389 ~~~p~~~~ 396 (1002)
+..|..++
T Consensus 307 ~~~~~~~~ 314 (336)
T 2ast_B 307 TIARPTIG 314 (336)
T ss_dssp CTTCSSCS
T ss_pred cccCCccc
Confidence 65555544
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1e-22 Score=223.85 Aligned_cols=173 Identities=24% Similarity=0.426 Sum_probs=94.5
Q ss_pred cCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCc
Q 037042 395 IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474 (1002)
Q Consensus 395 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 474 (1002)
+..+++|++|+|++|++++..+ +..+++|++|+|++|++++. +.+..+++|+.|+|++|++++. + .+..+++|+
T Consensus 59 ~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~ 132 (308)
T 1h6u_A 59 VQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQ 132 (308)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCC
T ss_pred hhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCC
Confidence 3444445555555555543322 45555555555555555432 2345555555555555555542 2 155555555
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
.|++++|++++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|+
T Consensus 133 ~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 133 VLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSC
T ss_pred EEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCc
Confidence 55555555555433 5556666666666666654322 5566666666666666654433 5566666666666666
Q ss_pred ecccCCcccccccccceeccccccccC
Q 037042 555 LQGSIPDSFGDLMSLKSLNLSNNNLSG 581 (1002)
Q Consensus 555 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 581 (1002)
+++..| +..+++|+.|+|++|++++
T Consensus 207 l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 207 ISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cCcccc--ccCCCCCCEEEccCCeeec
Confidence 664332 5666666666666666653
No 349
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=1.5e-22 Score=222.60 Aligned_cols=195 Identities=24% Similarity=0.344 Sum_probs=173.3
Q ss_pred cCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCc
Q 037042 395 IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474 (1002)
Q Consensus 395 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 474 (1002)
+..+++|++|++++|.++. +| .+..+++|++|+|++|.+++..+ +..+++|++|+|++|++++. + .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCC
Confidence 4567789999999999985 44 68999999999999999996544 99999999999999999864 3 699999999
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
.|++++|+++++. .+..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|+
T Consensus 111 ~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 9999999998863 39999999999999999997544 8999999999999999997654 9999999999999999
Q ss_pred ecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcc
Q 037042 555 LQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEG 605 (1002)
Q Consensus 555 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 605 (1002)
+++..+ +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 996554 8999999999999999996553 8999999999999999986
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=3.9e-22 Score=223.70 Aligned_cols=223 Identities=17% Similarity=0.141 Sum_probs=170.3
Q ss_pred ccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCC-ccccCCCCCCE-EEccCCcccccCCccccCCccccEE
Q 037042 375 HSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIP-ITLGKLQKLQV-LYFPDNKLEGSIPDEVCRLAKVYQL 452 (1002)
Q Consensus 375 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L 452 (1002)
.++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++++. +.++.|+++...|+.|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 456666666666665555678889999999999998866554 56888888765 6667788888888888889999999
Q ss_pred EccCCcCCccCCccccCCccCccccccc-ccccccCCccccccc-cCceeeccCCCCCCCCcccccccccceeeeCCC-C
Q 037042 453 DLSNNKLSGSIPACFGDLASLRNLSLAS-NELISVIPSTFWNLK-DILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSM-N 529 (1002)
Q Consensus 453 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~-N 529 (1002)
++++|+|++..+..+....++..|++.+ |++..+.+..|..+. .++.|+|++|+|+.+.+..| ...+|+.|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCC
Confidence 9999999877777777777788888865 577777777787765 58889999999986444444 556889999874 6
Q ss_pred ccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCc
Q 037042 530 NFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNK 602 (1002)
Q Consensus 530 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 602 (1002)
.++.+.+++|.++++|+.|+|++|+|+...+..|.++++|+.+++ ++++ .+| .+.++++|+.++++++.
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred cccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-CchhCcChhhCcCCCCc
Confidence 777666678899999999999999999666666777776666554 3454 566 47888999999987654
No 351
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.86 E-value=6.3e-23 Score=251.18 Aligned_cols=224 Identities=21% Similarity=0.200 Sum_probs=126.9
Q ss_pred CCCCChhHHHHHHHHHHhccCCCCCccccCCC-CCCCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEE
Q 037042 4 NTSNITTDLDALHALKTHITNDPTNFFAKNWN-SSISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSL 82 (1002)
Q Consensus 4 ~~~~~~~~~~~l~~~k~~~~~~~~~~~~~~w~-~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L 82 (1002)
+.+....++++|.++..+.....+.. ...|. ..+..+.|.++++.. .+++.|+|.++++.+ +|..+....+|..+
T Consensus 126 s~s~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~ 201 (727)
T 4b8c_D 126 SKSLVDCTKQALMEMADTLTDSKTAK-KQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQALLQHKKLSQY 201 (727)
T ss_dssp ------CCCHHHHHHHHHHHHHHTTC------------------------------------------------------
T ss_pred hhhccccchhhhhhhhhhcccccCcc-cCCCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chhhHhhcCccCcc
Confidence 44567888999999998764433332 23453 344567899998876 579999999999986 45444333333332
Q ss_pred -----EcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEc
Q 037042 83 -----FLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRL 157 (1002)
Q Consensus 83 -----~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 157 (1002)
+++.|.+. ..|..+..+++|++|+|++|.+. .+|..++ .+++|++|+|++|.|+ .+|..|++|++|++|+|
T Consensus 202 ~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~-~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 277 (727)
T 4b8c_D 202 SIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIF-KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDL 277 (727)
T ss_dssp ---------------------CCCCCCEEECTTSCCS-CCCGGGG-GCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEEC
T ss_pred cccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhc-CCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeC
Confidence 23334444 55788889999999999999998 7888887 6899999999999998 88888999999999999
Q ss_pred ccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCccccc
Q 037042 158 SYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVG 237 (1002)
Q Consensus 158 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~ 237 (1002)
++|+|+ .+|..|++|++|++|+|++|.|+ .+|..|++|++|++|+|++|+|++
T Consensus 278 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~--------------------------~lp~~~~~l~~L~~L~L~~N~l~~ 330 (727)
T 4b8c_D 278 SHNRLT-SLPAELGSCFQLKYFYFFDNMVT--------------------------TLPWEFGNLCNLQFLGVEGNPLEK 330 (727)
T ss_dssp TTSCCS-SCCSSGGGGTTCSEEECCSSCCC--------------------------CCCSSTTSCTTCCCEECTTSCCCS
T ss_pred cCCcCC-ccChhhcCCCCCCEEECCCCCCC--------------------------ccChhhhcCCCccEEeCCCCccCC
Confidence 999998 78989999999999999999886 578888999999999999999998
Q ss_pred ccccccccccc-cceeecccCCCccc
Q 037042 238 VIPAEIFNMST-IQGVGLQNNSLSGS 262 (1002)
Q Consensus 238 ~~p~~~~~l~~-L~~L~L~~N~l~~~ 262 (1002)
.+|..+..+.. +..++|++|.+++.
T Consensus 331 ~~p~~~~~~~~~~~~l~l~~N~l~~~ 356 (727)
T 4b8c_D 331 QFLKILTEKSVTGLIFYLRDNRPEIP 356 (727)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred CChHHHhhcchhhhHHhhccCcccCc
Confidence 88888765532 22355666655543
No 352
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=4.4e-22 Score=215.20 Aligned_cols=163 Identities=16% Similarity=0.146 Sum_probs=126.5
Q ss_pred HHHHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccc------------------hhHHHHHHHHHHHHhccC
Q 037042 700 ELCQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCG------------------RAFKSFDVECEVMKSIRH 761 (1002)
Q Consensus 700 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h 761 (1002)
.+......|+..+.||+|+||.||+|+..+|+.||||+++.... .....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 34445566778899999999999999987799999999864321 13456889999999999
Q ss_pred CCcceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCe
Q 037042 762 RNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNV 841 (1002)
Q Consensus 762 ~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NI 841 (1002)
| +++++++..+ ..++||||+++|+|.+ +... ....++.||++|++||| +.+|+||||||+||
T Consensus 163 -~-~~v~~~~~~~-----~~~lvmE~~~g~~L~~-l~~~-------~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NI 224 (282)
T 1zar_A 163 -G-LAVPKVYAWE-----GNAVLMELIDAKELYR-VRVE-------NPDEVLDMILEEVAKFY---HRGIVHGDLSQYNV 224 (282)
T ss_dssp -T-SSSCCEEEEE-----TTEEEEECCCCEEGGG-CCCS-------CHHHHHHHHHHHHHHHH---HTTEECSCCSTTSE
T ss_pred -C-CCcCeEEecc-----ceEEEEEecCCCcHHH-cchh-------hHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHE
Confidence 4 6666655432 3479999999999998 4221 23469999999999999 89999999999999
Q ss_pred eeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCC----------CCcCcccchHH
Q 037042 842 LLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSE----------GRVSTNGDVYN 897 (1002)
Q Consensus 842 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~DvwS 897 (1002)
|++ ++.+||+|||+|+.. ..|+|||++.. .+|+..+|+|.
T Consensus 225 Ll~-~~~vkl~DFG~a~~~---------------~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 225 LVS-EEGIWIIDFPQSVEV---------------GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp EEE-TTEEEECCCTTCEET---------------TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred EEE-CCcEEEEECCCCeEC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 999 999999999998632 23789997643 34555566654
No 353
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=8e-21 Score=199.16 Aligned_cols=164 Identities=25% Similarity=0.293 Sum_probs=135.0
Q ss_pred CCCCCCCCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccc
Q 037042 33 NWNSSISFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQ 112 (1002)
Q Consensus 33 ~w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 112 (1002)
-|..+.+.|+|++|.|.. +++. .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 11 ~~~~~~~~Cs~~~v~c~~------------~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~ 75 (229)
T 3e6j_A 11 AACPSQCSCSGTTVDCRS------------KRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQ 75 (229)
T ss_dssp CCCCTTCEEETTEEECTT------------SCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ccCCCCCEEeCCEeEccC------------CCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCC
Confidence 355677889999999964 3343 6676554 899999999999998889999999999999999999
Q ss_pred cccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccc
Q 037042 113 LSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDH 192 (1002)
Q Consensus 113 l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 192 (1002)
|. .+|...|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+.++++|++|+|++|+|++.
T Consensus 76 l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~--- 150 (229)
T 3e6j_A 76 LG-ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSI--- 150 (229)
T ss_dssp CC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCC---
T ss_pred CC-CcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCcc---
Confidence 96 788888888999999999999998777777888999999999999988 7788888888899999988888742
Q ss_pred hhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcccccc
Q 037042 193 GFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNKLVGV 238 (1002)
Q Consensus 193 ~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 238 (1002)
.+..+..+++|+.|+|++|.+...
T Consensus 151 ----------------------~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 151 ----------------------PHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp ----------------------CTTTTTTCTTCCEEECTTSCBCTT
T ss_pred ----------------------CHHHHhCCCCCCEEEeeCCCccCC
Confidence 224567788888888888887753
No 354
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=8e-21 Score=196.21 Aligned_cols=161 Identities=24% Similarity=0.249 Sum_probs=81.4
Q ss_pred CCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeecc
Q 037042 424 KLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLS 503 (1002)
Q Consensus 424 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 503 (1002)
+|++|++++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|+++++.+..|.++++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 33444444444443333333344444444444444443333344444444444444444444444444555555555555
Q ss_pred CCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCC
Q 037042 504 SNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSI 583 (1002)
Q Consensus 504 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 583 (1002)
+|++++..+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|.+.+ .+++|+.|+++.|+++|.+
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVV 181 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCcee
Confidence 555554444445555555555555555555555555556666666666665543 2335666666666666666
Q ss_pred cccccCCC
Q 037042 584 PVSLEKLS 591 (1002)
Q Consensus 584 p~~~~~l~ 591 (1002)
|..++.++
T Consensus 182 p~~~~~l~ 189 (208)
T 2o6s_A 182 RNSAGSVA 189 (208)
T ss_dssp BCTTSSBC
T ss_pred eccCcccc
Confidence 66655544
No 355
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=4.5e-21 Score=226.00 Aligned_cols=187 Identities=22% Similarity=0.289 Sum_probs=88.0
Q ss_pred CCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEE
Q 037042 350 YLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLY 429 (1002)
Q Consensus 350 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 429 (1002)
+|+.|+|++|.|++++.. +.++|+.|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.+ +|++|+
T Consensus 60 ~L~~L~Ls~n~L~~lp~~-----l~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~ 126 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDN-----LPPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLD 126 (571)
T ss_dssp TCSEEECCSSCCSCCCSC-----CCTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEE
T ss_pred CccEEEeCCCCCCccCHh-----HcCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEE
Confidence 666777777766654221 1134555555555554 333 223444455555554443 333 332 444444
Q ss_pred ccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCC
Q 037042 430 FPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTG 509 (1002)
Q Consensus 430 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 509 (1002)
|++|+|++ +|. . +++|+.|+|++|+|+++ |. .+++|++|+|++|+|++
T Consensus 127 Ls~N~l~~-lp~---~------------------------l~~L~~L~Ls~N~l~~l-p~---~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 127 VDNNQLTM-LPE---L------------------------PALLEYINADNNQLTML-PE---LPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp CCSSCCSC-CCC---C------------------------CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC
T ss_pred CCCCcCCC-CCC---c------------------------CccccEEeCCCCccCcC-CC---cCCCcCEEECCCCCCCC
Confidence 44444443 232 2 34444444444444442 22 23445555555555544
Q ss_pred CCcccccccccceeeeCCCCccCccCcccccCCccc-------cEEEccCeeecccCCcccccccccceeccccccccCC
Q 037042 510 PLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDL-------QFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGS 582 (1002)
Q Consensus 510 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 582 (1002)
+|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.
T Consensus 175 -lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~ 245 (571)
T 3cvr_A 175 -LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSR 245 (571)
T ss_dssp -CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHH
T ss_pred -cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCc
Confidence 333 33 44555555555554 2233 332 44 55555555555 3455555555555555555555555
Q ss_pred CcccccCC
Q 037042 583 IPVSLEKL 590 (1002)
Q Consensus 583 ~p~~~~~l 590 (1002)
+|..+..+
T Consensus 246 ~p~~l~~l 253 (571)
T 3cvr_A 246 IRESLSQQ 253 (571)
T ss_dssp HHHHHHHH
T ss_pred CHHHHHHh
Confidence 55554443
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=5.3e-21 Score=199.10 Aligned_cols=156 Identities=26% Similarity=0.294 Sum_probs=105.7
Q ss_pred EEEccCCcCCccCCccccCCccCcccccccccccccCC-ccccccccCceeeccCCCCCCCCcccccccccceeeeCCCC
Q 037042 451 QLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIP-STFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMN 529 (1002)
Q Consensus 451 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 529 (1002)
.+++++|.++. +|..+. ..++.|+|++|+|+++.+ ..|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 45555555553 333332 234556666666665533 34666666777777777766666666777777777777777
Q ss_pred ccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCCC
Q 037042 530 NFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIPK 609 (1002)
Q Consensus 530 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 609 (1002)
+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 77776667777777777777777777777777777777777777777777777777777777788888888888776553
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=2.1e-20 Score=210.47 Aligned_cols=176 Identities=24% Similarity=0.208 Sum_probs=97.9
Q ss_pred cEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCcccc-CCccccEEEccCCcCCccCCccccCCccCccccccc
Q 037042 402 IGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVC-RLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLAS 480 (1002)
Q Consensus 402 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 480 (1002)
+.+++++|+++. +|..+. +.++.|+|++|+|++..+..+. .+++|+.|+|++|+|+++.+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 466777777763 444432 2466666666666655555555 666666666666666655555666666666666666
Q ss_pred ccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccc---cCCccccEEEccCeeecc
Q 037042 481 NELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAI---GGIKDLQFLFLEYNILQG 557 (1002)
Q Consensus 481 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~ 557 (1002)
|+|+++.+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 66665555555556666666666665555555555555555555555555554443333 335555555555555554
Q ss_pred cCCcccccccc--cceecccccccc
Q 037042 558 SIPDSFGDLMS--LKSLNLSNNNLS 580 (1002)
Q Consensus 558 ~~p~~~~~l~~--L~~L~Ls~N~l~ 580 (1002)
..+..|..++. |+.|+|++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 33344444443 244444444444
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.1e-19 Score=188.98 Aligned_cols=161 Identities=18% Similarity=0.227 Sum_probs=144.4
Q ss_pred CCCCCCcccccEeeCC---------CCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEE
Q 037042 36 SSISFCNWTGVTCDVH---------SHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLL 106 (1002)
Q Consensus 36 ~~~~~c~w~gv~c~~~---------~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 106 (1002)
++...|.|..|.|... ...++.|+|++|++++..+..+..+++|++|+|++|++++..|..|.++++|++|
T Consensus 6 P~~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L 85 (220)
T 2v9t_B 6 PAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 85 (220)
T ss_dssp CTTSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEE
T ss_pred CCCCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEE
Confidence 3445589999999652 2368999999999998777799999999999999999998889999999999999
Q ss_pred EecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccc
Q 037042 107 SFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGL 186 (1002)
Q Consensus 107 ~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 186 (1002)
+|++|+|+ .+|..+|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|.+
T Consensus 86 ~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 86 VLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred ECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 99999999 78999999999999999999999999899999999999999999999988888899999999999999999
Q ss_pred cccccchhhHH
Q 037042 187 QGAYDHGFLQI 197 (1002)
Q Consensus 187 ~~~~~~~~~~~ 197 (1002)
....+..|+..
T Consensus 165 ~c~c~l~~l~~ 175 (220)
T 2v9t_B 165 ICDCHLKWLAD 175 (220)
T ss_dssp ECSGGGHHHHH
T ss_pred CCCCccHHHHH
Confidence 87555444433
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.3e-20 Score=196.14 Aligned_cols=134 Identities=22% Similarity=0.322 Sum_probs=68.9
Q ss_pred cCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEcc
Q 037042 472 SLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLE 551 (1002)
Q Consensus 472 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 551 (1002)
+|+.|+|++|+|+++.+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|+|+++.+..|.++++|+.|+|+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 34444444444444444444444444444444444444444444444555555555555554444445555555555555
Q ss_pred CeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcc
Q 037042 552 YNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEG 605 (1002)
Q Consensus 552 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 605 (1002)
+|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.+
T Consensus 113 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 113 ANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 555555555555555555555555555555444555555556666666666554
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=6e-20 Score=199.92 Aligned_cols=150 Identities=27% Similarity=0.428 Sum_probs=76.0
Q ss_pred cCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCc
Q 037042 395 IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474 (1002)
Q Consensus 395 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 474 (1002)
+..+++|++|+|++|++++..+ +.++++|++|+|++|++++ +| .+..+++|+.|+|++|++++. ..+..+++|+
T Consensus 64 ~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~ 137 (291)
T 1h6t_A 64 IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLE 137 (291)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCC
T ss_pred HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCC
Confidence 4445555555555555554333 5555666666666665553 22 255555555555555555532 2344455555
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
.|++++|+++++ ..+..+++|+.|++++|++++..+ +..+++|+.|++++|.|++. | .+..+++|+.|++++|+
T Consensus 138 ~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 138 SLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQE 211 (291)
T ss_dssp EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEE
T ss_pred EEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCc
Confidence 555555555443 344555555555555555554322 44455555555555555432 2 24444455555555554
Q ss_pred ec
Q 037042 555 LQ 556 (1002)
Q Consensus 555 l~ 556 (1002)
++
T Consensus 212 i~ 213 (291)
T 1h6t_A 212 CL 213 (291)
T ss_dssp EE
T ss_pred cc
Confidence 44
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=9.9e-20 Score=217.17 Aligned_cols=130 Identities=26% Similarity=0.396 Sum_probs=66.8
Q ss_pred cCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCc
Q 037042 395 IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474 (1002)
Q Consensus 395 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 474 (1002)
+..+++|+.|+|++|+|++. | .+..+++|+.|+|++|++++. +.+..+++|+.|+|++|+|+
T Consensus 83 l~~l~~L~~L~Ls~N~l~~l-~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~-------------- 144 (605)
T 1m9s_A 83 LTNLKNLGWLFLDENKIKDL-S-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKIT-------------- 144 (605)
T ss_dssp GGGCTTCCEEECCSSCCCCC-T-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCC--------------
T ss_pred hccCCCCCEEECcCCCCCCC-h-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccC--------------
Confidence 44555566666666655532 2 455555555555555555431 23444444444554444444
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
++ ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.
T Consensus 145 ----------~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 145 ----------DI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQE 208 (605)
T ss_dssp ----------CC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEE
T ss_pred ----------Cc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCc
Confidence 43 344455555555555555554333 55555555555555555543 235555556666666665
Q ss_pred eccc
Q 037042 555 LQGS 558 (1002)
Q Consensus 555 l~~~ 558 (1002)
+.+.
T Consensus 209 l~~~ 212 (605)
T 1m9s_A 209 CLNK 212 (605)
T ss_dssp EECC
T ss_pred CcCC
Confidence 5543
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.2e-19 Score=216.29 Aligned_cols=170 Identities=29% Similarity=0.445 Sum_probs=88.6
Q ss_pred CCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCC
Q 037042 271 LPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKY 350 (1002)
Q Consensus 271 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~ 350 (1002)
+++|+.|+|++|.+.. +| .+..+++|+.|+|++|+|+++.| |..+++|+.|+|++|+|+.++ .+..+++
T Consensus 42 L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-------~l~~l~~ 110 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLS-------SLKDLKK 110 (605)
T ss_dssp HTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCT-------TSTTCTT
T ss_pred CCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCCh-------hhccCCC
Confidence 3444555555555542 22 35556666666666666665443 556666666666666665543 2455555
Q ss_pred CcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEc
Q 037042 351 LEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYF 430 (1002)
Q Consensus 351 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 430 (1002)
|+.|+|++|.|.++ ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|
T Consensus 111 L~~L~Ls~N~l~~l----------------------------~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L 160 (605)
T 1m9s_A 111 LKSLSLEHNGISDI----------------------------NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 160 (605)
T ss_dssp CCEEECTTSCCCCC----------------------------GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEEC
T ss_pred CCEEEecCCCCCCC----------------------------ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEEC
Confidence 55555555555432 1234445555555555555433 34455555555555
Q ss_pred cCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccc
Q 037042 431 PDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELIS 485 (1002)
Q Consensus 431 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 485 (1002)
++|+|++..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+.+
T Consensus 161 s~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 161 EDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred cCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 5555554333 45555555555555555532 234555555555555555544
No 363
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=4.5e-21 Score=227.49 Aligned_cols=203 Identities=20% Similarity=0.197 Sum_probs=148.8
Q ss_pred ccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccCcc-------------ccc
Q 037042 171 GNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGLNK-------------LVG 237 (1002)
Q Consensus 171 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~N~-------------l~~ 237 (1002)
..+++|+.|+|++|+|+ .+|.++++|++|+.|++++|. +.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~--------------------------~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~ 399 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST--------------------------VLQSELESCKELQELEPENKWCLLTIILLMRALDPLL 399 (567)
T ss_dssp STTTTSSSCCCCHHHHH--------------------------HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGG
T ss_pred ccCccceeccCChhhHH--------------------------hhHHHHHHHHHHHHhccccchhhhhHHHHHHhccccc
Confidence 66889999999999997 589999999999999998876 567
Q ss_pred ccccccccccccceee-cccCCCccccCCccccCCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCcccc
Q 037042 238 VIPAEIFNMSTIQGVG-LQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTF 316 (1002)
Q Consensus 238 ~~p~~~~~l~~L~~L~-L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 316 (1002)
.+|..+.++++|+.|+ ++.|.+ .+|..+.+++|.++...+ ..|+.|+|++|+|+++ |. |
T Consensus 400 ~~~~~l~~l~~L~~L~~l~~n~~------------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~ 459 (567)
T 1dce_A 400 YEKETLQYFSTLKAVDPMRAAYL------------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-L 459 (567)
T ss_dssp GHHHHHHHHHHHHHHCGGGHHHH------------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-G
T ss_pred CCHHHHHHHHhcccCcchhhccc------------chhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-c
Confidence 7888899999999998 777755 378889999999885433 2588999999999974 55 8
Q ss_pred ccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccC
Q 037042 317 GNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIG 396 (1002)
Q Consensus 317 ~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~ 396 (1002)
+++++|+.|+|++|+|+.+|.. +.++++|+.|+|++|.|+++ | .|+
T Consensus 460 ~~l~~L~~L~Ls~N~l~~lp~~------~~~l~~L~~L~Ls~N~l~~l---------------------------p-~l~ 505 (567)
T 1dce_A 460 EQLLLVTHLDLSHNRLRALPPA------LAALRCLEVLQASDNALENV---------------------------D-GVA 505 (567)
T ss_dssp GGGTTCCEEECCSSCCCCCCGG------GGGCTTCCEEECCSSCCCCC---------------------------G-GGT
T ss_pred cccccCcEeecCcccccccchh------hhcCCCCCEEECCCCCCCCC---------------------------c-ccC
Confidence 8888898888888888877643 55666666666666665532 3 455
Q ss_pred CCCCccEEEccCCccCccC-CccccCCCCCCEEEccCCcccccCCcc---ccCCccccEEE
Q 037042 397 NLTNLIGFYLGGNNLNGSI-PITLGKLQKLQVLYFPDNKLEGSIPDE---VCRLAKVYQLD 453 (1002)
Q Consensus 397 ~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~l~~L~~L~ 453 (1002)
.+++|+.|+|++|+|++.. |..|+.+++|+.|+|++|.+++.+|.. +..+++|+.|+
T Consensus 506 ~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 506 NLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp TCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 6666666666666666655 666666666666666666666543321 12245555554
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=2.1e-19 Score=186.96 Aligned_cols=134 Identities=23% Similarity=0.305 Sum_probs=83.7
Q ss_pred ccEEEccCCcCCccCC-ccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCC
Q 037042 449 VYQLDLSNNKLSGSIP-ACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFS 527 (1002)
Q Consensus 449 L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 527 (1002)
++.|+|++|+|++..+ ..|..+++|+.|+|++|+|+++.+..|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 3455555555554432 335555566666666666665555566666666666666666666555556666666666666
Q ss_pred CCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCC
Q 037042 528 MNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGS 582 (1002)
Q Consensus 528 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 582 (1002)
+|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|++++.
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 6666666666666666666666666666666666666666666777777766654
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.4e-19 Score=197.12 Aligned_cols=173 Identities=23% Similarity=0.361 Sum_probs=133.2
Q ss_pred cCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCc
Q 037042 395 IGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLR 474 (1002)
Q Consensus 395 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 474 (1002)
+..+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +..+++|+.|+|++|++++ +| .+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 44667788888888888754 3 47888888888888888886544 7888888888888888875 33 378888888
Q ss_pred ccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCee
Q 037042 475 NLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI 554 (1002)
Q Consensus 475 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (1002)
.|++++|++.++ ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|+|++|.
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 888888888775 4677788888888888888764 567778888888888888876654 7778888888888888
Q ss_pred ecccCCcccccccccceeccccccccC
Q 037042 555 LQGSIPDSFGDLMSLKSLNLSNNNLSG 581 (1002)
Q Consensus 555 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 581 (1002)
|++ +| .+..+++|+.|++++|+++.
T Consensus 190 i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 190 ISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 875 33 37777788888888887774
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=1.3e-19 Score=203.97 Aligned_cols=177 Identities=23% Similarity=0.251 Sum_probs=132.7
Q ss_pred ccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCcccc-CCCCCCEEEccCCcccccCCccccCCccccEEEcc
Q 037042 377 LKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLG-KLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLS 455 (1002)
Q Consensus 377 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 455 (1002)
-+.+++++|+++. +|..+. +.++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 20 ~~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 3567788887774 455443 3577788888888877777776 78888888888888887777777888888888888
Q ss_pred CCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccc---cccccceeeeCCCCccC
Q 037042 456 NNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEI---GNLKVLVKIDFSMNNFS 532 (1002)
Q Consensus 456 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~ 532 (1002)
+|+|++..+..|..+++|+.|+|++|+|.++.|..|.++++|+.|+|++|+|++..+..| ..+++|+.|||++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 888887777778888888888888888887777778888888888888888876555445 56778888888888888
Q ss_pred ccCcccccCCcc--ccEEEccCeeec
Q 037042 533 GVIPNAIGGIKD--LQFLFLEYNILQ 556 (1002)
Q Consensus 533 ~~~p~~~~~l~~--L~~L~Ls~N~l~ 556 (1002)
++.+..|..++. |+.|+|++|.+.
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ccCHHHhhhccHhhcceEEecCCCcc
Confidence 766677777776 377888888776
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=4.3e-19 Score=185.93 Aligned_cols=155 Identities=24% Similarity=0.280 Sum_probs=102.3
Q ss_pred cEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCC
Q 037042 450 YQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMN 529 (1002)
Q Consensus 450 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 529 (1002)
+.++.+++.++ .+|..+. ++|+.|+|++|+|.++.|..|.++++|++|+|++|+|+...+..|..+++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 34555555554 2333222 55666666666666665666666666666666666666555555666667777777777
Q ss_pred ccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcCcccCC
Q 037042 530 NFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608 (1002)
Q Consensus 530 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 608 (1002)
+|+++.+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 776666666777777777777777777 566677777777777777777776666667777777777777777776654
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=3.9e-21 Score=227.96 Aligned_cols=203 Identities=20% Similarity=0.171 Sum_probs=131.3
Q ss_pred cCCCccchhhcccccccccccccccccCCCCeeecCCCc-------------cCCCCccccccccccchhc-cccccCcc
Q 037042 269 VRLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNS-------------FSGFIPSTFGNLRNLKRLG-LNNNHLTS 334 (1002)
Q Consensus 269 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~ 334 (1002)
...++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+..
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 34677888888888887 678888888888888887765 5677788888899999988 77776654
Q ss_pred chhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCcc
Q 037042 335 LTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGS 414 (1002)
Q Consensus 335 l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 414 (1002)
++ .+.+++|.|..+.+ ..|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .
T Consensus 425 L~----------------~l~l~~n~i~~l~~--------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~ 477 (567)
T 1dce_A 425 LR----------------SKFLLENSVLKMEY--------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-A 477 (567)
T ss_dssp HH----------------HHHHHHHHHHHHHH--------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-C
T ss_pred hh----------------hhhhhcccccccCc--------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-c
Confidence 43 23344555443311 135666666666664 344 666666777777776666 5
Q ss_pred CCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccC-CccccCCccCcccccccccccccCCcc---
Q 037042 415 IPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSI-PACFGDLASLRNLSLASNELISVIPST--- 490 (1002)
Q Consensus 415 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~--- 490 (1002)
+|..|+++++|+.|+|++|+|++ +| .+..+++|+.|+|++|+|++.. |..|+.+++|+.|+|++|.+++.+|..
T Consensus 478 lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l 555 (567)
T 1dce_A 478 LPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERL 555 (567)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHH
T ss_pred cchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHH
Confidence 56666666666666666666664 44 5666666666666666666554 666666666666666666666544321
Q ss_pred ccccccCceee
Q 037042 491 FWNLKDILYLN 501 (1002)
Q Consensus 491 ~~~l~~L~~L~ 501 (1002)
+..+++|+.|+
T Consensus 556 ~~~lp~L~~L~ 566 (567)
T 1dce_A 556 AEMLPSVSSIL 566 (567)
T ss_dssp HHHCTTCSEEE
T ss_pred HHHCcccCccC
Confidence 22245555554
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=9.8e-19 Score=178.70 Aligned_cols=152 Identities=20% Similarity=0.272 Sum_probs=90.8
Q ss_pred CCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCc
Q 037042 74 GNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLR 153 (1002)
Q Consensus 74 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 153 (1002)
+.+++|++|+|++|.++ .+| .+..+++|++|++++|.+. .++ .+..+++|++|+|++|++++..|..|+++++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~~--~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NYN--PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CCG--GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cch--hhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 45566666666666666 455 5666666666666666554 222 234566666666666666665666666666666
Q ss_pred eEEcccccCCCCCccccccccccceeeecccc-ccccccchhhHHhhhchhhcccCCcccCCCCccccCccccceeeccC
Q 037042 154 ILRLSYNDFAGGIPKEIGNLTKLEELYLSFNG-LQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLEVLALGL 232 (1002)
Q Consensus 154 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~~L~L~~ 232 (1002)
+|+|++|++++..|..|+++++|++|+|++|. ++ .+| .+..+++|++|++++
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~--------------------------~~~-~l~~l~~L~~L~l~~ 168 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT--------------------------DIM-PLKTLPELKSLNIQF 168 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC--------------------------CCG-GGGGCSSCCEEECTT
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc--------------------------ccH-hhcCCCCCCEEECCC
Confidence 66666666666566666666666666666665 43 233 455666666666666
Q ss_pred cccccccccccccccccceeecccCCC
Q 037042 233 NKLVGVIPAEIFNMSTIQGVGLQNNSL 259 (1002)
Q Consensus 233 N~l~~~~p~~~~~l~~L~~L~L~~N~l 259 (1002)
|++++. + .+..+++|+.|++++|++
T Consensus 169 n~i~~~-~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 169 DGVHDY-R-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp BCCCCC-T-TGGGCSSCCEEEECBC--
T ss_pred CCCcCh-H-HhccCCCCCEEEeeCccc
Confidence 666542 2 444455555555555544
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=1.8e-19 Score=220.55 Aligned_cols=181 Identities=21% Similarity=0.238 Sum_probs=67.9
Q ss_pred CccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccc
Q 037042 416 PITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLK 495 (1002)
Q Consensus 416 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 495 (1002)
|..|..+++|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|+|+ .+|..|++++
T Consensus 217 ~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 293 (727)
T 4b8c_D 217 KDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCF 293 (727)
T ss_dssp -----CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGT
T ss_pred hhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCC
Confidence 333444444444444444444 33333334444444444444444 34444444444444444444444 2344455555
Q ss_pred cCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCcc-ccEEEccCeeecccCCcccccccccceecc
Q 037042 496 DILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKD-LQFLFLEYNILQGSIPDSFGDLMSLKSLNL 574 (1002)
Q Consensus 496 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 574 (1002)
+|++|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|.. |+.|++
T Consensus 294 ~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l 366 (727)
T 4b8c_D 294 QLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEI 366 (727)
T ss_dssp TCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------------
T ss_pred CCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEe
Confidence 5555555555554 34444555555555555555555555555443321 123455555555555542 233344
Q ss_pred ccc--------cccCCCcccccCCCccceeeCCCCcCccc
Q 037042 575 SNN--------NLSGSIPVSLEKLSYLKDLNLSFNKLEGE 606 (1002)
Q Consensus 575 s~N--------~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 606 (1002)
++| .|.+..+..+..+..+....+++|-+.+.
T Consensus 367 ~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~ 406 (727)
T 4b8c_D 367 NTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQH 406 (727)
T ss_dssp -----------------------------------CCCGG
T ss_pred ecccccccccCCccccccchhhcccccceeeeeccccccc
Confidence 444 33334444455555666666777766543
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=6.7e-18 Score=171.57 Aligned_cols=171 Identities=18% Similarity=0.264 Sum_probs=134.6
Q ss_pred EEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCc-ccccccCCcEEEecccccccccCcccCCCCCCCCEEeCC
Q 037042 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPF-SIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLS 134 (1002)
Q Consensus 56 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls 134 (1002)
+.++++++++. .+|..+.. +|++|+|++|+|++..|. .|.++++|++|+|++|+|++..|. .|.++++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPN-AFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTT-TTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHh-HcCCcccCCEEECC
Confidence 36778888885 78887765 999999999999976665 489999999999999999965554 45789999999999
Q ss_pred CCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCC
Q 037042 135 KNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCE 214 (1002)
Q Consensus 135 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 214 (1002)
+|+|++..|..|.++++|++|+|++|+|++.+|..|..+++|++|+|++|.+++..+..++..+.... .+..+...|.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~--~~~~~~~~C~ 164 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKK--SLNGGAARCG 164 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHH--CCSGGGCBBC
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHc--CCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999876654443333222 2333444555
Q ss_pred CCccccCccccceeeccCccc
Q 037042 215 IPNEIGNLRNLEVLALGLNKL 235 (1002)
Q Consensus 215 ~p~~l~~l~~L~~L~L~~N~l 235 (1002)
.|..+. .....++..+.+
T Consensus 165 ~P~~l~---~~~l~~l~~~~~ 182 (192)
T 1w8a_A 165 APSKVR---DVQIKDLPHSEF 182 (192)
T ss_dssp SSTTTT---TSBGGGSCTTTC
T ss_pred CChHHc---CCChhhCcHhhc
Confidence 555433 334444444444
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=1.1e-18 Score=186.99 Aligned_cols=166 Identities=19% Similarity=0.278 Sum_probs=92.8
Q ss_pred ccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccC
Q 037042 377 LKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSN 456 (1002)
Q Consensus 377 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 456 (1002)
+..+++++|.+++.. .+..+++|+.|++++|+++. +| .+..+++|+.|+|++|++++..+ +..+++|+.|+|++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 333444444444322 35556666666666666653 33 45666666666666666664333 56666666666666
Q ss_pred CcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCc
Q 037042 457 NKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIP 536 (1002)
Q Consensus 457 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 536 (1002)
|++++. |.. .. ++|+.|+|++|++++. +.+..+++|+.|++++|++++. + .+..+++|+.|+|++|++++.
T Consensus 95 N~l~~l-~~~-~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-- 165 (263)
T 1xeu_A 95 NRLKNL-NGI-PS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-- 165 (263)
T ss_dssp SCCSCC-TTC-CC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--
T ss_pred CccCCc-Ccc-cc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--
Confidence 666643 221 11 5566666666666553 2355566666666666666543 2 455556666666666666544
Q ss_pred ccccCCccccEEEccCeeecc
Q 037042 537 NAIGGIKDLQFLFLEYNILQG 557 (1002)
Q Consensus 537 ~~~~~l~~L~~L~Ls~N~l~~ 557 (1002)
..+..+++|+.|++++|.+++
T Consensus 166 ~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 166 GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp TTSTTCCCCCEEEEEEEEEEC
T ss_pred HHhccCCCCCEEeCCCCcccC
Confidence 445556666666666666654
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=2e-18 Score=184.89 Aligned_cols=169 Identities=21% Similarity=0.273 Sum_probs=100.0
Q ss_pred CCCccchhhcccccccccccccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCC
Q 037042 270 RLPNLEELYLWGNHFSGSIPNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCK 349 (1002)
Q Consensus 270 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~ 349 (1002)
.+.++..+++++|.+++.. .+..+++|++|++++|+|+.+ | .+..+++|++|+|++|+|+.++. +..++
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~-------l~~l~ 85 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP-------LKDLT 85 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-------GTTCS
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh-------hccCC
Confidence 3456777777777777433 466778888888888888754 3 67788888888888888887653 56777
Q ss_pred CCcEEeCCCCCCCCcccccccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEE
Q 037042 350 YLEFIDLSSNSIDGILSRKSVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLY 429 (1002)
Q Consensus 350 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 429 (1002)
+|++|+|++|+++++.... . .+|+.|++++|++++. ..+..+++|+.|+|++|++++. + .+..+++|+.|+
T Consensus 86 ~L~~L~L~~N~l~~l~~~~---~--~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~ 156 (263)
T 1xeu_A 86 KLEELSVNRNRLKNLNGIP---S--ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLD 156 (263)
T ss_dssp SCCEEECCSSCCSCCTTCC---C--SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEE
T ss_pred CCCEEECCCCccCCcCccc---c--CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEE
Confidence 8888888888777653211 1 3455555555555432 2344555555555555555433 1 344445555555
Q ss_pred ccCCcccccCCccccCCccccEEEccCCcCC
Q 037042 430 FPDNKLEGSIPDEVCRLAKVYQLDLSNNKLS 460 (1002)
Q Consensus 430 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 460 (1002)
|++|++++. ..+..+++|+.|++++|.++
T Consensus 157 L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 157 LHGNEITNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp CTTSCCCBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred CCCCcCcch--HHhccCCCCCEEeCCCCccc
Confidence 555544433 33444444444444444444
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=7.8e-18 Score=171.98 Aligned_cols=150 Identities=17% Similarity=0.287 Sum_probs=131.4
Q ss_pred cEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeC
Q 037042 54 RVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNL 133 (1002)
Q Consensus 54 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~L 133 (1002)
+++.|++++|+++ .+| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|++++..|..+ ..+++|++|+|
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l-~~l~~L~~L~L 119 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNL-SGLTSLTLLDI 119 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCC-TTCTTCCEEEC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhh-cCCCCCCEEEe
Confidence 5889999999998 677 7999999999999999775 44589999999999999999998777765 67999999999
Q ss_pred CCCcccccCCccccCCCCCceEEccccc-CCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCccc
Q 037042 134 SKNMFHGGIPSALSNCTYLRILRLSYND-FAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSK 212 (1002)
Q Consensus 134 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~ 212 (1002)
++|++++..|..++++++|++|+|++|. ++ .+| .+.++++|++|++++|++++
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~------------------------ 173 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD------------------------ 173 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC------------------------
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC------------------------
Confidence 9999998889999999999999999998 65 666 69999999999999999984
Q ss_pred CCCCccccCccccceeeccCccccc
Q 037042 213 CEIPNEIGNLRNLEVLALGLNKLVG 237 (1002)
Q Consensus 213 ~~~p~~l~~l~~L~~L~L~~N~l~~ 237 (1002)
++ .+..+++|++|++++|++.+
T Consensus 174 --~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 174 --YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp --CT-TGGGCSSCCEEEECBC----
T ss_pred --hH-HhccCCCCCEEEeeCcccCC
Confidence 34 67889999999999999864
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=1.6e-18 Score=176.14 Aligned_cols=131 Identities=27% Similarity=0.326 Sum_probs=84.9
Q ss_pred cEEEccCCcCCccCCccccCCccCcccccccccccccCCc-cccccccCceeeccCCCCCCCCcccccccccceeeeCCC
Q 037042 450 YQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPS-TFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSM 528 (1002)
Q Consensus 450 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 528 (1002)
+.+++++|+++ .+|..+.. +|+.|++++|+|.++.+. .|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56777777776 45544432 667777777777665553 366666666666666666666666666666666666666
Q ss_pred CccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCC
Q 037042 529 NNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSI 583 (1002)
Q Consensus 529 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 583 (1002)
|+|++..|..|.++++|+.|+|++|+|++.+|..|..+++|+.|+|++|++++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 6666666666666666666666666666666666666666666666666666543
No 376
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73 E-value=1.8e-18 Score=184.69 Aligned_cols=138 Identities=20% Similarity=0.271 Sum_probs=105.7
Q ss_pred CCCCCceeeccCcceEEEEEe-CCCcE--EEEEEeecccch------------------------hHHHHHHHHHHHHhc
Q 037042 707 GFSENNLIGRGGFGSVYKARI-QDGME--VAVKVFNQQCGR------------------------AFKSFDVECEVMKSI 759 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l 759 (1002)
-|+..+.||+|+||.||+|+. .+|+. ||||+++..... ....+.+|+++++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 366788999999999999987 67989 999987543111 123678899999999
Q ss_pred cCCCc--ceeeeEEecCchhhHHHHHhhccCCC-C----ChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcE
Q 037042 760 RHRNI--IKIISCCSIGDFKALFKALALEYMPH-G----SLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVI 832 (1002)
Q Consensus 760 ~h~ni--v~~~~~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ii 832 (1002)
.|+++ +..+++ . ..++||||+.+ | +|.++... .++..+..++.|++.|+.|||. ..+|+
T Consensus 128 ~~~~i~~p~~~~~--~------~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~giv 193 (258)
T 1zth_A 128 KEAGVSVPQPYTY--M------KNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELV 193 (258)
T ss_dssp HHTTCCCCCEEEE--E------TTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEE
T ss_pred HhCCCCCCeEEEc--C------CCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEE
Confidence 88764 344432 1 34699999942 4 66665432 2234567899999999999994 57899
Q ss_pred EccCCCCCeeeCCCCcEEEecccccccc
Q 037042 833 HCDLKPSNVLLGDNMVAHLSDFGITKLL 860 (1002)
Q Consensus 833 HrDlkp~NILl~~~~~~kl~DfGla~~~ 860 (1002)
||||||+|||++. .++|+|||+|...
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999988 9999999999754
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=1.8e-18 Score=192.03 Aligned_cols=102 Identities=17% Similarity=0.213 Sum_probs=55.1
Q ss_pred CccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccce-eeeCCCCccCccCcccccCCccccEE
Q 037042 470 LASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLV-KIDFSMNNFSGVIPNAIGGIKDLQFL 548 (1002)
Q Consensus 470 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 548 (1002)
+++|+.|+|++|+++.+.+.+|.++.+|+.|++++| ++.+.+.+|.++.+|+ .+++.+ .++.+.+.+|.++.+|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 444555555555555554555555555555555554 4444444555555555 555555 4544555555555555555
Q ss_pred EccCeeecccCCcccccccccceec
Q 037042 549 FLEYNILQGSIPDSFGDLMSLKSLN 573 (1002)
Q Consensus 549 ~Ls~N~l~~~~p~~~~~l~~L~~L~ 573 (1002)
++++|.++.+.+.+|.++++|+.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 5555555555555555555555554
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=7.2e-18 Score=187.23 Aligned_cols=197 Identities=11% Similarity=0.047 Sum_probs=142.8
Q ss_pred CCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcC----CccCCccccCCccC
Q 037042 398 LTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKL----SGSIPACFGDLASL 473 (1002)
Q Consensus 398 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l----~~~~p~~~~~l~~L 473 (1002)
+++|+.|+|.+ +++.+.+.+|.++++|+.|++++|.+....+.+|.+..++..+.++.+.. ....+.+|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 88888888888 77777777788888888888888888767777777777777776665322 22233445444444
Q ss_pred c--------------------------ccccccccccccCCccc-cccccCceeeccCCCCCCCCcccccccccceeeeC
Q 037042 474 R--------------------------NLSLASNELISVIPSTF-WNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDF 526 (1002)
Q Consensus 474 ~--------------------------~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 526 (1002)
+ .+.+.++- .......+ ..+++|+.|+|++|+++.+.+..|.++++|+.|+|
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l-~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKL-DNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECC-CHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeee-cHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 4 22222221 11001111 13678899999988888777778888999999999
Q ss_pred CCCccCccCcccccCCcccc-EEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeC
Q 037042 527 SMNNFSGVIPNAIGGIKDLQ-FLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNL 598 (1002)
Q Consensus 527 s~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 598 (1002)
++| ++.+.+.+|.++.+|+ .|++.+ .++.+.+.+|.++++|+.|++++|+++.+.+..|.++++|+.++.
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 888 8778888899999998 999988 777677888999999999999888888777778888888888764
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=2.8e-16 Score=159.50 Aligned_cols=138 Identities=25% Similarity=0.351 Sum_probs=121.6
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N 136 (1002)
.+++++++++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|+ .++...|.++++|++|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCC-EeCHhHccCCCCCCEEECCCC
Confidence 5777888887 7787664 69999999999998 88999999999999999999999 577777789999999999999
Q ss_pred cccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhh
Q 037042 137 MFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFV 199 (1002)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 199 (1002)
+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|.+....+..++..+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~~~~ 151 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWV 151 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHH
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHHHHHH
Confidence 999888889999999999999999999766678999999999999999998765555544443
No 380
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=2.8e-16 Score=157.38 Aligned_cols=136 Identities=23% Similarity=0.301 Sum_probs=116.5
Q ss_pred CCCcccccEeeCCCCcEEEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccC
Q 037042 39 SFCNWTGVTCDVHSHRVTALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIP 118 (1002)
Q Consensus 39 ~~c~w~gv~c~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip 118 (1002)
..|+|++|.|+. +++. .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++ .+|
T Consensus 5 C~C~~~~l~~~~------------~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~ 68 (177)
T 2o6r_A 5 CSCSGTEIRCNS------------KGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLP 68 (177)
T ss_dssp CEEETTEEECCS------------SCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCC
T ss_pred CEeCCCEEEecC------------CCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcce-EeC
Confidence 347787777754 4454 4565443 69999999999999777778899999999999999998 677
Q ss_pred cccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccc
Q 037042 119 TNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAY 190 (1002)
Q Consensus 119 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 190 (1002)
...|..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..
T Consensus 69 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 69 DGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred hhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 777789999999999999999888888999999999999999999766667899999999999999998754
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.3e-16 Score=158.47 Aligned_cols=133 Identities=21% Similarity=0.158 Sum_probs=92.7
Q ss_pred CCCCCEEEcccCCCC-CCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCce
Q 037042 76 LSSLQSLFLHSNQFS-GSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRI 154 (1002)
Q Consensus 76 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 154 (1002)
.++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|++
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~---~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV---SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC---SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh---hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 467777777777776 67777777777777777777777643 34456777777777777777667777777777777
Q ss_pred EEcccccCCCCC-ccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCc----cccCccccceee
Q 037042 155 LRLSYNDFAGGI-PKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPN----EIGNLRNLEVLA 229 (1002)
Q Consensus 155 L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~----~l~~l~~L~~L~ 229 (1002)
|+|++|++++.. +..+..+++|++|++++|.+++ +|. .+..+++|++|+
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~--------------------------~~~~~~~~~~~l~~L~~L~ 153 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTN--------------------------LNDYRESVFKLLPQLTYLD 153 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGT--------------------------STTHHHHHHTTCSSCCEET
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcc--------------------------hHHHHHHHHHhCccCcEec
Confidence 777777776432 2567777777777777777763 222 456677777777
Q ss_pred ccCccccc
Q 037042 230 LGLNKLVG 237 (1002)
Q Consensus 230 L~~N~l~~ 237 (1002)
++.|.+..
T Consensus 154 l~~n~~~~ 161 (168)
T 2ell_A 154 GYDREDQE 161 (168)
T ss_dssp TEETTSCB
T ss_pred CCCCChhh
Confidence 77776653
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=2e-16 Score=157.07 Aligned_cols=130 Identities=26% Similarity=0.238 Sum_probs=54.5
Q ss_pred ccEEEccCCcCC-ccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCC
Q 037042 449 VYQLDLSNNKLS-GSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFS 527 (1002)
Q Consensus 449 L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 527 (1002)
|+.|+|++|+++ +.+|..+..+++|+.|++++|.+++. ..|..+++|++|++++|++++.+|..+..+++|+.|+|+
T Consensus 26 L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 103 (168)
T 2ell_A 26 VRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLS 103 (168)
T ss_dssp CSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECB
T ss_pred CCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEecc
Confidence 334444444433 23333333344444444444443332 333444444444444444443333333334444444444
Q ss_pred CCccCccC-cccccCCccccEEEccCeeecccCC---cccccccccceecccccccc
Q 037042 528 MNNFSGVI-PNAIGGIKDLQFLFLEYNILQGSIP---DSFGDLMSLKSLNLSNNNLS 580 (1002)
Q Consensus 528 ~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 580 (1002)
+|+|++.. +..+..+++|+.|++++|.+++..+ ..|..+++|+.|++++|.+.
T Consensus 104 ~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 104 GNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp SSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred CCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 44444321 1344444444444444444443222 24444445555555555444
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=8.8e-17 Score=163.25 Aligned_cols=111 Identities=32% Similarity=0.409 Sum_probs=73.1
Q ss_pred cCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccc
Q 037042 496 DILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLS 575 (1002)
Q Consensus 496 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 575 (1002)
+|++|++++|+++ .+|..|.++++|+.|+|++|+|+++.+.+|.++++|+.|+|++|+|++..|..|..+++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4555666666665 344556666666666666666666666666666666777777777666666667777777777777
Q ss_pred cccccCCCcccccCCCccceeeCCCCcCcccC
Q 037042 576 NNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEI 607 (1002)
Q Consensus 576 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 607 (1002)
+|+|++..+..|..+++|+.|+|++|+|.+..
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 77776555556667777777777777776543
No 384
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.63 E-value=2.4e-15 Score=170.42 Aligned_cols=266 Identities=12% Similarity=0.160 Sum_probs=192.5
Q ss_pred cCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccccccccc
Q 037042 295 ASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLS 374 (1002)
Q Consensus 295 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 374 (1002)
...++.+.+.+ .++.+...+|.+. +|+.+.|..| ++.++.. +|.++ +|+.+++..
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~-----aF~~~-~L~~i~lp~---------------- 166 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDM-----AFFNS-TVQEIVFPS---------------- 166 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTT-----TTTTC-CCCEEECCT----------------
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHH-----hcCCC-CceEEEeCC----------------
Confidence 35666666654 4555666777764 6777777665 6666543 24442 455555543
Q ss_pred ccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEc
Q 037042 375 HSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDL 454 (1002)
Q Consensus 375 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 454 (1002)
.+....+..|.++++|+.+++.+|+++.+....|. ..+|+.+.|.++ ++.....+|.++++|+.+++
T Consensus 167 -----------~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 167 -----------TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp -----------TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred -----------CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 23334456788888888888888888866666676 578888888754 66566677888888888888
Q ss_pred cCCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCC-----CCCcccccccccceeeeCCCC
Q 037042 455 SNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLT-----GPLPLEIGNLKVLVKIDFSMN 529 (1002)
Q Consensus 455 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N 529 (1002)
..| ++.+...+|.+ .+|+.+.+ .|.++.+.+.+|.++++|+.+++.+|.+. .+.+..|.++++|+.++|. |
T Consensus 234 ~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~ 309 (401)
T 4fdw_A 234 PEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-E 309 (401)
T ss_dssp CTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-T
T ss_pred CCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-C
Confidence 865 56566777877 67888888 55677777788888888888888887765 3556778888888888888 4
Q ss_pred ccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCC-ccceeeCCCCcCc
Q 037042 530 NFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLS-YLKDLNLSFNKLE 604 (1002)
Q Consensus 530 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~ 604 (1002)
.++.+...+|.++.+|+.++|..| ++.+.+.+|.++ +|+.|++++|.+....+..|..++ .++.|++..|.+.
T Consensus 310 ~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 310 SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 577777788888888888888665 665677888888 888888888888766667777774 6777777766544
No 385
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.63 E-value=2.3e-15 Score=170.64 Aligned_cols=249 Identities=10% Similarity=0.113 Sum_probs=126.9
Q ss_pred cccccccCCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCccccc
Q 037042 289 PNFIFNASKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRK 368 (1002)
Q Consensus 289 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~ 368 (1002)
...|.+ .+|+.+.|.+| ++.+...+|.+. +|+.+.|.+ .++.++.. +|.+|++|+.++++.|.++.+....
T Consensus 129 ~~aF~~-~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~-----aF~~c~~L~~l~l~~n~l~~I~~~a 199 (401)
T 4fdw_A 129 KDAFRN-SQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKED-----IFYYCYNLKKADLSKTKITKLPAST 199 (401)
T ss_dssp TTTTTT-CCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSS-----TTTTCTTCCEEECTTSCCSEECTTT
T ss_pred Hhhccc-CCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHH-----HhhCcccCCeeecCCCcceEechhh
Confidence 334444 25666665554 555555556553 466666653 45555432 3566666666666666555442221
Q ss_pred ccccccccccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCcc
Q 037042 369 SVGNLSHSLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAK 448 (1002)
Q Consensus 369 ~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 448 (1002)
+. ..+|+.+.+.++ +..+....|.++++|+.+.+.+| ++.+...+|.+ .+|+.+.+. |
T Consensus 200 F~---~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~--------------- 257 (401)
T 4fdw_A 200 FV---YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-N--------------- 257 (401)
T ss_dssp TT---TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-T---------------
T ss_pred Ee---ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-C---------------
Confidence 11 023333333321 33233345555555555555543 33344444444 445555552 2
Q ss_pred ccEEEccCCcCCccCCccccCCccCccccccccccc-----ccCCccccccccCceeeccCCCCCCCCccccccccccee
Q 037042 449 VYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELI-----SVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVK 523 (1002)
Q Consensus 449 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 523 (1002)
.++.+.+.+|.++++|+.+++.+|.+. .+.+.+|.++++|+.+++. +.++.+....|.++++|+.
T Consensus 258 ---------~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~ 327 (401)
T 4fdw_A 258 ---------GVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQ 327 (401)
T ss_dssp ---------TCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCE
T ss_pred ---------CccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccE
Confidence 233334444444555555544444433 3444556666666666665 3355444555666666666
Q ss_pred eeCCCCccCccCcccccCCccccEEEccCeeecccCCccccccc-ccceecccccccc
Q 037042 524 IDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLM-SLKSLNLSNNNLS 580 (1002)
Q Consensus 524 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~ 580 (1002)
++|..| ++.+.+.+|.++ +|+.|++++|.+....+..|.+++ +++.|++..|.+.
T Consensus 328 l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 328 LTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp EEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 666433 555555666666 666666666666655555666653 5566666655543
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=4e-16 Score=151.41 Aligned_cols=108 Identities=23% Similarity=0.242 Sum_probs=56.3
Q ss_pred CCCCEEEcccCCCC-CCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceE
Q 037042 77 SSLQSLFLHSNQFS-GSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRIL 155 (1002)
Q Consensus 77 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 155 (1002)
++|+.|+|++|.++ +.+|..+..+++|++|+|++|++++. ..+..+++|++|+|++|.+++.+|..++++++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI---ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC---TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc---hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 45666666666665 55665555566666666665555532 223445555555555555554444444445555555
Q ss_pred EcccccCCCC-Cccccccccccceeeecccccc
Q 037042 156 RLSYNDFAGG-IPKEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 156 ~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
+|++|++++. .|..+.++++|++|++++|.++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCccc
Confidence 5555555431 2244444555555555555444
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=7.1e-16 Score=154.46 Aligned_cols=114 Identities=25% Similarity=0.305 Sum_probs=74.3
Q ss_pred ccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceecc
Q 037042 495 KDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNL 574 (1002)
Q Consensus 495 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 574 (1002)
++|+.|++++|++++..+..|..+++|+.|++++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 35556666666666555555566666666666666666555556666667777777777776655566666777777777
Q ss_pred ccccccCCCcccccCCCccceeeCCCCcCcccCC
Q 037042 575 SNNNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608 (1002)
Q Consensus 575 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 608 (1002)
++|+|++..+..+..+++|++|+|++|++++.+|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7777765555556667777777777777776655
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=4e-16 Score=151.42 Aligned_cols=126 Identities=21% Similarity=0.227 Sum_probs=52.7
Q ss_pred cccEEEccCCcCC-ccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeC
Q 037042 448 KVYQLDLSNNKLS-GSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDF 526 (1002)
Q Consensus 448 ~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 526 (1002)
+|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+.++++|++|++++|++++.+|..+..+++|+.|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 3444444444443 33333334444444444444444333 33344444444444444444333433334444444444
Q ss_pred CCCccCcc-CcccccCCccccEEEccCeeecccCC---cccccccccceeccc
Q 037042 527 SMNNFSGV-IPNAIGGIKDLQFLFLEYNILQGSIP---DSFGDLMSLKSLNLS 575 (1002)
Q Consensus 527 s~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls 575 (1002)
++|.+++. .+..++.+++|+.|++++|.+++..+ ..+..+++|+.|+++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 44444432 12344444444444444444443322 234444444444443
No 389
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=1.5e-15 Score=167.48 Aligned_cols=143 Identities=13% Similarity=0.128 Sum_probs=103.9
Q ss_pred HHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccc--------------h--------hHHHHHHHHHHHHhc
Q 037042 702 CQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCG--------------R--------AFKSFDVECEVMKSI 759 (1002)
Q Consensus 702 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~--------~~~~~~~E~~~l~~l 759 (1002)
.....-|++.+.||+|+||.||+|...+|+.||||+++.... . ......+|...+.++
T Consensus 91 ~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL 170 (397)
T 4gyi_A 91 AARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL 170 (397)
T ss_dssp HHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence 333345899999999999999999988899999998753210 0 011234577777777
Q ss_pred cCCCcceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCC
Q 037042 760 RHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839 (1002)
Q Consensus 760 ~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~ 839 (1002)
.+.++....-+.... .++||||++|++|.++.... ....++.|++.+|.||| ..+||||||||.
T Consensus 171 ~~~gv~vp~p~~~~~------~~LVME~i~G~~L~~l~~~~-------~~~~l~~qll~~l~~lH---~~gIVHrDLKp~ 234 (397)
T 4gyi_A 171 YEEGFPVPEPIAQSR------HTIVMSLVDALPMRQVSSVP-------DPASLYADLIALILRLA---KHGLIHGDFNEF 234 (397)
T ss_dssp HHTTCSCCCEEEEET------TEEEEECCSCEEGGGCCCCS-------CHHHHHHHHHHHHHHHH---HTTEECSCCSTT
T ss_pred HhcCCCCCeeeeccC------ceEEEEecCCccHhhhcccH-------HHHHHHHHHHHHHHHHH---HCCCcCCCCCHH
Confidence 655543222221111 25999999999987664321 23568899999999999 889999999999
Q ss_pred CeeeCCCC----------cEEEecccccccc
Q 037042 840 NVLLGDNM----------VAHLSDFGITKLL 860 (1002)
Q Consensus 840 NILl~~~~----------~~kl~DfGla~~~ 860 (1002)
|||+++++ .+.|+||+-+...
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 99998776 3899999977543
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.58 E-value=2.4e-15 Score=150.35 Aligned_cols=133 Identities=17% Similarity=0.114 Sum_probs=91.1
Q ss_pred ccCCCCCCCEEEcccCCCCCCCCccccccc-CCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCC
Q 037042 72 RLGNLSSLQSLFLHSNQFSGSIPFSIFNIH-TLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCT 150 (1002)
Q Consensus 72 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 150 (1002)
.+.++.+|++|+|++|+++ .+|. +..+. +|++|+|++|+|++. ..+..+++|++|+|++|+|++..|..|+.++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~---~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL---DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE---CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc---cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 4566777888888888887 4454 44444 777888877777743 2346677777777777777755445557777
Q ss_pred CCceEEcccccCCCCCcc--ccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCcc----ccCccc
Q 037042 151 YLRILRLSYNDFAGGIPK--EIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNE----IGNLRN 224 (1002)
Q Consensus 151 ~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~----l~~l~~ 224 (1002)
+|++|+|++|+|+ .+|. .+..+++|++|++++|.++. +|.. ++.+++
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~--------------------------~~~~~~~~~~~l~~ 141 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN--------------------------KKHYRLYVIYKVPQ 141 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG--------------------------STTHHHHHHHHCTT
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC--------------------------cHhHHHHHHHHCCc
Confidence 7777777777775 5555 67777777777777777763 3332 566677
Q ss_pred cceeeccCcccc
Q 037042 225 LEVLALGLNKLV 236 (1002)
Q Consensus 225 L~~L~L~~N~l~ 236 (1002)
|++||++.|.+.
T Consensus 142 L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 142 VRVLDFQKVKLK 153 (176)
T ss_dssp CSEETTEECCHH
T ss_pred cceeCCCcCCHH
Confidence 777777777665
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=3e-17 Score=167.81 Aligned_cols=139 Identities=24% Similarity=0.284 Sum_probs=80.4
Q ss_pred cCCCCCCCEEEcccCCCCCCCCc------ccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccc
Q 037042 73 LGNLSSLQSLFLHSNQFSGSIPF------SIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSAL 146 (1002)
Q Consensus 73 l~~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 146 (1002)
+.....++.++|+.|.++|.+|. .+..+++|++|+|++|++++ +| .+..+++|++|+|++|.++ .+|..+
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~--~~~~l~~L~~L~l~~n~l~-~l~~~~ 89 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS--SLSGMENLRILSLGRNLIK-KIENLD 89 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC--CHHHHTTCCEEEEEEEEEC-SCSSHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc--ccccCCCCCEEECCCCCcc-cccchh
Confidence 33444555555555555555554 55556666666666666553 44 2344555666666666665 455556
Q ss_pred cCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccccc
Q 037042 147 SNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRNLE 226 (1002)
Q Consensus 147 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~L~ 226 (1002)
..+++|++|+|++|++++ +| .+.++++|++|+|++|++++.. .+..+..+++|+
T Consensus 90 ~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~------------------------~~~~l~~l~~L~ 143 (198)
T 1ds9_A 90 AVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWG------------------------EIDKLAALDKLE 143 (198)
T ss_dssp HHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHH------------------------HHHHHTTTTTCS
T ss_pred hcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchh------------------------HHHHHhcCCCCC
Confidence 666667777777776664 44 4666666777777777665311 002455666677
Q ss_pred eeeccCccccccccc
Q 037042 227 VLALGLNKLVGVIPA 241 (1002)
Q Consensus 227 ~L~L~~N~l~~~~p~ 241 (1002)
+|++++|.+++.+|.
T Consensus 144 ~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 144 DLLLAGNPLYNDYKE 158 (198)
T ss_dssp EEEECSCHHHHHHHT
T ss_pred EEEecCCcccccccc
Confidence 777777766655443
No 392
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.57 E-value=5.8e-14 Score=159.80 Aligned_cols=316 Identities=13% Similarity=0.079 Sum_probs=151.2
Q ss_pred ccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCc
Q 037042 138 FHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPN 217 (1002)
Q Consensus 138 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~ 217 (1002)
++..-..+|.++++|+.+.|..+ ++..-..+|.++++|+.++|..+ ++.+. ..
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~-------------------------~~ 111 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIG-------------------------RC 111 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEEC-------------------------TT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEcc-------------------------ch
Confidence 44444567788888888888643 65444566778888888877644 33211 13
Q ss_pred cccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCC
Q 037042 218 EIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASK 297 (1002)
Q Consensus 218 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 297 (1002)
.|.++.+|+.+.+..+ ++.+...+|.++.. ++...... +.......|.++++
T Consensus 112 aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~-------------------------~~~~~~~~--~~~i~~~aF~~c~~ 163 (394)
T 4fs7_A 112 TFSGCYALKSILLPLM-LKSIGVEAFKGCDF-------------------------KEITIPEG--VTVIGDEAFATCES 163 (394)
T ss_dssp TTTTCTTCCCCCCCTT-CCEECTTTTTTCCC-------------------------SEEECCTT--CCEECTTTTTTCTT
T ss_pred hhcccccchhhcccCc-eeeecceeeecccc-------------------------cccccCcc--ccccchhhhcccCC
Confidence 4556666666655433 33232333333221 11111111 11122345666677
Q ss_pred CCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccc
Q 037042 298 LSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSL 377 (1002)
Q Consensus 298 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L 377 (1002)
|+.+.+.++. ..+...+|.++.+|+.+.+..| ++.++.. .|.++..|+.+.+..+...
T Consensus 164 L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~-----~F~~~~~L~~i~~~~~~~~--------------- 221 (394)
T 4fs7_A 164 LEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDY-----CFAECILLENMEFPNSLYY--------------- 221 (394)
T ss_dssp CCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTT-----TTTTCTTCCBCCCCTTCCE---------------
T ss_pred CcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCch-----hhccccccceeecCCCceE---------------
Confidence 7777776543 3355666777777777777655 5555432 3666666666655443221
Q ss_pred cEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCC
Q 037042 378 KIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNN 457 (1002)
Q Consensus 378 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 457 (1002)
+.+.+...++|+.+.+..+ ++.+....|..+..|+.+.+..+... .....|.....++.+.+..+
T Consensus 222 -------------i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~ 286 (394)
T 4fs7_A 222 -------------LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSV 286 (394)
T ss_dssp -------------ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSS
T ss_pred -------------eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCce
Confidence 0111222334444444322 22233344555555555555544332 33334444444444444433
Q ss_pred cCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcc
Q 037042 458 KLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPN 537 (1002)
Q Consensus 458 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 537 (1002)
.+ ....|..+.+|+.+.+..+ +..+...+|.++.+|+.+++.++ ++.+...+|.++.+|+.+++..| ++.+...
T Consensus 287 ~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~ 360 (394)
T 4fs7_A 287 IV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGAN 360 (394)
T ss_dssp EE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTT
T ss_pred ee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHH
Confidence 22 1234444444554444332 33333444444444544444322 33333334444444444444333 3333334
Q ss_pred cccCCccccEEEcc
Q 037042 538 AIGGIKDLQFLFLE 551 (1002)
Q Consensus 538 ~~~~l~~L~~L~Ls 551 (1002)
+|.++.+|+.+++.
T Consensus 361 aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 361 AFQGCINLKKVELP 374 (394)
T ss_dssp TBTTCTTCCEEEEE
T ss_pred HhhCCCCCCEEEEC
Confidence 44444444444443
No 393
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.56 E-value=7.7e-14 Score=158.81 Aligned_cols=102 Identities=14% Similarity=0.115 Sum_probs=53.0
Q ss_pred cccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCccccccccC
Q 037042 418 TLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDI 497 (1002)
Q Consensus 418 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 497 (1002)
.|..+.+|+.+.+.++ ++..-..+|.++.+|+.++|.++ ++.+...+|.++++|+.+++..| ++.+...+|.++.+|
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 368 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINL 368 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTC
T ss_pred cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCC
Confidence 3444555555555433 33233344555555555555433 44444556666666666666554 555555566666666
Q ss_pred ceeeccCCCCCCCCcccccccccceee
Q 037042 498 LYLNLSSNSLTGPLPLEIGNLKVLVKI 524 (1002)
Q Consensus 498 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L 524 (1002)
+.+++..+ ++ .+...|.++++|+.+
T Consensus 369 ~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 369 KKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CEEEECCC-CE-EhhheecCCCCCcEE
Confidence 66666544 22 123455566665543
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=9.1e-17 Score=164.17 Aligned_cols=86 Identities=23% Similarity=0.285 Sum_probs=52.7
Q ss_pred cccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCccccCccc
Q 037042 145 ALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPNEIGNLRN 224 (1002)
Q Consensus 145 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~~l~~l~~ 224 (1002)
.|+++++|++|+|++|++++ +| .+.++++|++|+|++|+++ .+|..+..+++
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~--------------------------~l~~~~~~~~~ 94 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK--------------------------KIENLDAVADT 94 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC--------------------------SCSSHHHHHHH
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc--------------------------cccchhhcCCc
Confidence 66666666666666666664 55 6666666666666666665 34555555666
Q ss_pred cceeeccCcccccccccccccccccceeecccCCCc
Q 037042 225 LEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLS 260 (1002)
Q Consensus 225 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 260 (1002)
|++|+|++|++++ +| .+..+++|+.|++++|+++
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~ 128 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT 128 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECC
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCC
Confidence 6666666666665 23 3555555555555555544
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=5.3e-15 Score=147.86 Aligned_cols=135 Identities=19% Similarity=0.212 Sum_probs=102.0
Q ss_pred cccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCcccccccc
Q 037042 95 FSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLT 174 (1002)
Q Consensus 95 ~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 174 (1002)
..+.++.+|++|+|++|+++ .+|. +....++|++|+|++|.|++. ..|+++++|++|+|++|+|++..|..|.+++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 35677888999999999988 5554 434455899999999999864 5788899999999999999855445568888
Q ss_pred ccceeeeccccccccccchhhHHhhhchhhcccCCcccCCCCc--cccCccccceeeccCccccccccc----ccccccc
Q 037042 175 KLEELYLSFNGLQGAYDHGFLQIFVKNIFVQFSHNFSKCEIPN--EIGNLRNLEVLALGLNKLVGVIPA----EIFNMST 248 (1002)
Q Consensus 175 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~ 248 (1002)
+|++|+|++|+++ .+|. .++.+++|++|++++|.++.. |. .+..+++
T Consensus 89 ~L~~L~L~~N~i~--------------------------~~~~~~~l~~l~~L~~L~l~~N~i~~~-~~~~~~~~~~l~~ 141 (176)
T 1a9n_A 89 DLTELILTNNSLV--------------------------ELGDLDPLASLKSLTYLCILRNPVTNK-KHYRLYVIYKVPQ 141 (176)
T ss_dssp TCCEEECCSCCCC--------------------------CGGGGGGGGGCTTCCEEECCSSGGGGS-TTHHHHHHHHCTT
T ss_pred CCCEEECCCCcCC--------------------------cchhhHhhhcCCCCCEEEecCCCCCCc-HhHHHHHHHHCCc
Confidence 9999999999886 3444 677888888889988888743 44 3666666
Q ss_pred cceeecccCCCc
Q 037042 249 IQGVGLQNNSLS 260 (1002)
Q Consensus 249 L~~L~L~~N~l~ 260 (1002)
|+.|++++|.+.
T Consensus 142 L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 142 VRVLDFQKVKLK 153 (176)
T ss_dssp CSEETTEECCHH
T ss_pred cceeCCCcCCHH
Confidence 666666666543
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=6.9e-14 Score=139.15 Aligned_cols=104 Identities=26% Similarity=0.383 Sum_probs=82.9
Q ss_pred EEEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCC
Q 037042 56 TALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSK 135 (1002)
Q Consensus 56 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~ 135 (1002)
+.+++++|++. .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|..+|..+++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCC-ccChhHhCCcchhhEEECCC
Confidence 47899999996 7888775 88999999999999888888888888888888888887 46777777777777777777
Q ss_pred CcccccCCccccCCCCCceEEcccccCC
Q 037042 136 NMFHGGIPSALSNCTYLRILRLSYNDFA 163 (1002)
Q Consensus 136 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 163 (1002)
|+|++..+..|.++++|++|+|++|.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 7777555555777777777777777776
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=4.2e-14 Score=140.23 Aligned_cols=109 Identities=21% Similarity=0.214 Sum_probs=82.5
Q ss_pred CceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceecccc
Q 037042 497 ILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSN 576 (1002)
Q Consensus 497 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 576 (1002)
.+.+++++|.++. +|..+. +.|+.|+|++|+|+++.|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4567777777774 454442 6777788888888777777788888888888888888877777777888888888888
Q ss_pred ccccCCCcccccCCCccceeeCCCCcCcccCC
Q 037042 577 NNLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608 (1002)
Q Consensus 577 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 608 (1002)
|+|++..+..|..+++|+.|+|++|+|++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 88887666677888888888888888877655
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=9.9e-14 Score=137.53 Aligned_cols=103 Identities=24% Similarity=0.341 Sum_probs=75.0
Q ss_pred EEEeCCCCCccccCcccCCCCCCCEEEcccCCCCCCCCcccccccCCcEEEecccccccccCcccCCCCCCCCEEeCCCC
Q 037042 57 ALNISHLSLSGTIPSRLGNLSSLQSLFLHSNQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKN 136 (1002)
Q Consensus 57 ~L~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N 136 (1002)
.|++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|...|..+++|++|+|++|
T Consensus 13 ~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcC-ccChhhccCCCCCCEEECCCC
Confidence 6777888887 5777664 78888888888888777777888888877777777777 566666666677777777777
Q ss_pred cccccCCccccCCCCCceEEcccccCC
Q 037042 137 MFHGGIPSALSNCTYLRILRLSYNDFA 163 (1002)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 163 (1002)
+|++..+..|.++++|++|+|++|.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 776555555666666666666666665
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=1.1e-13 Score=137.76 Aligned_cols=108 Identities=21% Similarity=0.279 Sum_probs=76.0
Q ss_pred ceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccc
Q 037042 498 LYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNN 577 (1002)
Q Consensus 498 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 577 (1002)
+.+++++|+++. +|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 466777777653 454443 66777777777777777777777777777777777777665666677777777777777
Q ss_pred cccCCCcccccCCCccceeeCCCCcCcccCC
Q 037042 578 NLSGSIPVSLEKLSYLKDLNLSFNKLEGEIP 608 (1002)
Q Consensus 578 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 608 (1002)
+|++..+..|..+++|+.|+|++|+|.+..+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 7776555557777777777777777776544
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.39 E-value=1.3e-12 Score=146.13 Aligned_cols=137 Identities=20% Similarity=0.240 Sum_probs=78.3
Q ss_pred CcccccEeeCCCCcEEEEEeCCC-CCccccCcccCCCCCCCEEEccc-CCCCCCCCcccccccCCcEEEecccccccccC
Q 037042 41 CNWTGVTCDVHSHRVTALNISHL-SLSGTIPSRLGNLSSLQSLFLHS-NQFSGSIPFSIFNIHTLKLLSFGDNQLSGEIP 118 (1002)
Q Consensus 41 c~w~gv~c~~~~~~v~~L~l~~~-~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip 118 (1002)
|.|.+|.|. ++ +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|
T Consensus 8 C~~~~v~~~------------~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L--------------- 58 (347)
T 2ifg_A 8 HGSSGLRCT------------RDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGEL--------------- 58 (347)
T ss_dssp SSSSCEECC------------SSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCC---------------
T ss_pred ccCCEEEcC------------CCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCC---------------
Confidence 777777664 33 566 4677 77777777777775 77775444555555554
Q ss_pred cccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccccccchhhHHh
Q 037042 119 TNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQGAYDHGFLQIF 198 (1002)
Q Consensus 119 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 198 (1002)
++|+|++|+|++..|..|++|++|++|+|++|+|++..+..|..++ |++|+|++|.+....+..++..+
T Consensus 59 ----------~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~ 127 (347)
T 2ifg_A 59 ----------RNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRW 127 (347)
T ss_dssp ----------SEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHH
T ss_pred ----------CEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHH
Confidence 5555555555555555556666666666666666644444444444 66666666666654444444444
Q ss_pred hhchhhcccCCcccCCCCc
Q 037042 199 VKNIFVQFSHNFSKCEIPN 217 (1002)
Q Consensus 199 ~~~~~~~~~~n~~~~~~p~ 217 (1002)
.+.....+..+...|.-|.
T Consensus 128 ~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 128 EEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp HHTTCSSCGGGCCCCSSSS
T ss_pred HHhCcccccccCCCCCCCh
Confidence 4333333333444555555
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.31 E-value=2.1e-14 Score=161.05 Aligned_cols=111 Identities=21% Similarity=0.176 Sum_probs=49.9
Q ss_pred CCCCEEEcccCCCCCCCCcccccc-----cCCcEEEecccccccccCcccCCCCCCCCEEeCCCCcccccCCccc-----
Q 037042 77 SSLQSLFLHSNQFSGSIPFSIFNI-----HTLKLLSFGDNQLSGEIPTNICSNLPFFESLNLSKNMFHGGIPSAL----- 146 (1002)
Q Consensus 77 ~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~----- 146 (1002)
++|++|+|++|.++......+..+ ++|++|+|++|.++..-...++..+++|++|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 345555555555553322222221 4555555555555433222232334445555555555543222222
Q ss_pred cCCCCCceEEcccccCCC----CCccccccccccceeeecccccc
Q 037042 147 SNCTYLRILRLSYNDFAG----GIPKEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 147 ~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
...++|++|+|++|.|+. .++..+..+++|++|+|++|.|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 123455555555555542 12233344455555555555554
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.30 E-value=5.2e-11 Score=135.37 Aligned_cols=329 Identities=12% Similarity=0.151 Sum_probs=161.1
Q ss_pred ccCcc-ccceeeccCcccccccccccccccccceeecccCCCc--cccCCccccCCCccchhhccccccccccccccccc
Q 037042 219 IGNLR-NLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLS--GSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNA 295 (1002)
Q Consensus 219 l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 295 (1002)
|.+++ .|+.+.+-.+ ++.+-..+|.++++|+.+.+.+|.-+ ..+...+|....+|+.+.+..+ ++......|.++
T Consensus 59 F~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c 136 (394)
T 4gt6_A 59 FCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHC 136 (394)
T ss_dssp TTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTC
T ss_pred ccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhh
Confidence 44443 4666666543 55555566667777777776665321 1344455555555555555433 332333444455
Q ss_pred CCCCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccc
Q 037042 296 SKLSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSH 375 (1002)
Q Consensus 296 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 375 (1002)
.+|+.+.+..+ +..+...+|.++.+|+.+.+..+ ++.+... +|.+ ..|+.+
T Consensus 137 ~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~-----aF~~-~~l~~i--------------------- 187 (394)
T 4gt6_A 137 EELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEER-----AFTG-TALTQI--------------------- 187 (394)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTT-----TTTT-CCCSEE---------------------
T ss_pred cccccccccce-eeeecccceecccccccccccce-eeEeccc-----cccc-cceeEE---------------------
Confidence 55555555432 22234444555555554444332 3333221 1211 223333
Q ss_pred cccEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEcc
Q 037042 376 SLKIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLS 455 (1002)
Q Consensus 376 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 455 (1002)
.+..+- .......|.++.+++......+......-..+........... .+.....+..+.+.
T Consensus 188 -----~ip~~~-~~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ip 250 (394)
T 4gt6_A 188 -----HIPAKV-TRIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALI-----------RYPSQREDPAFKIP 250 (394)
T ss_dssp -----EECTTC-CEECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEE-----------ECCTTCCCSEEECC
T ss_pred -----EECCcc-cccccchhhhccccceecccccccccccceeeccccccccccc-----------ccccccccceEEcC
Confidence 332211 1122344555556665555544433111111111000000000 01111223333332
Q ss_pred CCcCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccC
Q 037042 456 NNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVI 535 (1002)
Q Consensus 456 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 535 (1002)
+.++.+...+|.++..|+.+.+..+. ..+...+|.++.+|+.+.+. +.++.+....|.++.+|+.+++..+ ++.+.
T Consensus 251 -~~v~~i~~~aF~~c~~L~~i~lp~~~-~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~ 326 (394)
T 4gt6_A 251 -NGVARIETHAFDSCAYLASVKMPDSV-VSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQIL 326 (394)
T ss_dssp -TTEEEECTTTTTTCSSCCEEECCTTC-CEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEEC
T ss_pred -CcceEcccceeeecccccEEeccccc-ceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEeh
Confidence 22333445566677777777665443 34555667777777777775 3455455566777777777777654 55566
Q ss_pred cccccCCccccEEEccCeeecccCCcccccccccceeccccccccCCCcccccCCCccceeeCCCCcC
Q 037042 536 PNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNNNLSGSIPVSLEKLSYLKDLNLSFNKL 603 (1002)
Q Consensus 536 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 603 (1002)
..+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+++.+|.... ..+.....|+.+.+..|.+
T Consensus 327 ~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 327 DDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred HhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 677777777777777654 554556777777778887777776542 3556667777777766554
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.30 E-value=4.8e-11 Score=135.66 Aligned_cols=111 Identities=13% Similarity=0.221 Sum_probs=48.0
Q ss_pred CCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccCcccccccccccccCCcccccc
Q 037042 415 IPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNL 494 (1002)
Q Consensus 415 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 494 (1002)
-..+|.++.+|+.+.+.++..+ .....|.++.+|+.+.+. +.++.+...+|.++.+|+.+++..+ ++.+...+|.++
T Consensus 257 ~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C 333 (394)
T 4gt6_A 257 ETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGC 333 (394)
T ss_dssp CTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred ccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCC
Confidence 3444555555555555443322 333344444455555443 2233333444555555555544432 333334444444
Q ss_pred ccCceeeccCCCCCCCCcccccccccceeeeCCCC
Q 037042 495 KDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMN 529 (1002)
Q Consensus 495 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 529 (1002)
.+|+.+.+..+ ++.+...+|.++++|+.+++.+|
T Consensus 334 ~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 334 EQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp TTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSC
T ss_pred CCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCc
Confidence 44444444322 33233333444444444444433
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.27 E-value=3.9e-14 Score=158.90 Aligned_cols=87 Identities=23% Similarity=0.241 Sum_probs=40.5
Q ss_pred ccCceeeccCCCCCCC----CcccccccccceeeeCCCCccCcc----CcccccCCccccEEEccCeeeccc----CCcc
Q 037042 495 KDILYLNLSSNSLTGP----LPLEIGNLKVLVKIDFSMNNFSGV----IPNAIGGIKDLQFLFLEYNILQGS----IPDS 562 (1002)
Q Consensus 495 ~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 562 (1002)
++|+.|+|++|.|+.. ++..+..+++|++|+|++|.|+.. ++..+...++|+.|+|++|.|++. ++..
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 3455555555554321 122223444555555555555432 233444455555556665555532 2222
Q ss_pred cccccccceeccccccccC
Q 037042 563 FGDLMSLKSLNLSNNNLSG 581 (1002)
Q Consensus 563 ~~~l~~L~~L~Ls~N~l~~ 581 (1002)
+...++|++|+|++|.|+.
T Consensus 235 L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 235 AREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHCSSCCEEECTTSSCCH
T ss_pred HHhCCCCCEEeccCCCCCH
Confidence 3334555555555555553
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.25 E-value=7.4e-12 Score=139.86 Aligned_cols=103 Identities=25% Similarity=0.248 Sum_probs=51.7
Q ss_pred eeccCC-CCCCCCcccccccccceeeeCCC-CccCccCcccccCCccccEEEccCeeecccCCcccccccccceeccccc
Q 037042 500 LNLSSN-SLTGPLPLEIGNLKVLVKIDFSM-NNFSGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLSNN 577 (1002)
Q Consensus 500 L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 577 (1002)
++++++ +|++ +|. +..+++|+.|+|++ |+|+++.+..|+++++|+.|+|++|+|++.+|..|..|++|+.|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 344444 4443 333 55555555555553 5555554455555555555555555555555555555555555555555
Q ss_pred cccCCCcccccCCCccceeeCCCCcCcc
Q 037042 578 NLSGSIPVSLEKLSYLKDLNLSFNKLEG 605 (1002)
Q Consensus 578 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 605 (1002)
+|++..+..|..++ |+.|+|++|+|.+
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 55543333343333 5555555555554
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.11 E-value=3.9e-11 Score=128.24 Aligned_cols=146 Identities=13% Similarity=0.051 Sum_probs=111.7
Q ss_pred HHhhcCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHH
Q 037042 702 CQATDGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALF 780 (1002)
Q Consensus 702 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 780 (1002)
....+.|+....+|.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++...+ .
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~----~ 84 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG----W 84 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT----E
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC----c
Confidence 345567888888888999999999755 6899999987532222346889999999984 677888998887654 4
Q ss_pred HHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCC---------------------------------
Q 037042 781 KALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY--------------------------------- 827 (1002)
Q Consensus 781 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--------------------------------- 827 (1002)
.++||||++|.++.+.... ......++.+++++++.||...
T Consensus 85 ~~lv~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 85 SNLLMSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EEEEEECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred eEEEEEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 4699999999999876421 1123468899999999999610
Q ss_pred -----------------------CCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 828 -----------------------STPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 828 -----------------------~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
...++|+|++|.||+++++..+.|+||+.+.
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876667799998764
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.09 E-value=2.1e-09 Score=121.41 Aligned_cols=300 Identities=10% Similarity=0.093 Sum_probs=134.1
Q ss_pred cccCccccceeeccCcccccccccccccccccceeecccCCCccccCCccccCCCccchhhcccccccccccccccccCC
Q 037042 218 EIGNLRNLEVLALGLNKLVGVIPAEIFNMSTIQGVGLQNNSLSGSLQSIPYVRLPNLEELYLWGNHFSGSIPNFIFNASK 297 (1002)
Q Consensus 218 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 297 (1002)
++....+|+.+.+.. .++.+-..+|.++++|+.+.|.++ ++ .+...+|... +|+.+.+..+ ++ .++...+...+
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~-~Ig~~aF~~c-~l~~i~~~~~-l~-~I~~~aF~~~~ 114 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VT-SIGDGAFADT-KLQSYTGMER-VK-KFGDYVFQGTD 114 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CC-EECTTTTTTC-CCCEEEECTT-CC-EECTTTTTTCC
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ce-EechhhhcCC-CCceEECCce-ee-EeccceeccCC
Confidence 344556666666653 355555667777777777777654 43 4555666554 4555555433 33 23333333346
Q ss_pred CCeeecCCCccCCCCccccccccccchhccccccCccchhhhhhhcccCCCCCCcEEeCCCCCCCCcccccccccccccc
Q 037042 298 LSRLELQKNSFSGFIPSTFGNLRNLKRLGLNNNHLTSLTLELSFLSSLSNCKYLEFIDLSSNSIDGILSRKSVGNLSHSL 377 (1002)
Q Consensus 298 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L 377 (1002)
|+.+.+..+ +..+...+|.+. +|+.+.+-. .++.+.. ..|.++.+++.+.+..+............
T Consensus 115 L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~-~v~~i~~-----~~f~~~~~l~~~~~~~~~~~~~~~~~~~~------ 180 (379)
T 4h09_A 115 LDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPK-SVTTIKD-----GIGYKAENLEKIEVSSNNKNYVAENYVLY------ 180 (379)
T ss_dssp CSEEECCTT-CCEECTTTTTTC-CCCEEEECT-TCCEECS-----CTTTTCTTCCEEEECTTCSSEEEETTEEE------
T ss_pred cccccCCCc-cccccccccccc-eeeeeeccc-eeecccc-----chhcccccccccccccccceeecccceec------
Confidence 777777654 333444555543 344444332 2333332 23566666666666554432211100000
Q ss_pred cEEecCCCCCCCCCCcccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCC
Q 037042 378 KIFDMSDCNVSGSIPEEIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNN 457 (1002)
Q Consensus 378 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 457 (1002)
+ ........+.....+..+.+..+.- ......+....+|+.+.+..+ +.......+.+...|+.+.+..+
T Consensus 181 -------~-~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~ 250 (379)
T 4h09_A 181 -------N-KNKTILESYPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN 250 (379)
T ss_dssp -------E-TTSSEEEECCTTCCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT
T ss_pred -------c-cccceecccccccccccccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC
Confidence 0 0001122233333444444333221 233344444555555555433 22233334444444555444433
Q ss_pred cCCccCCccccCCccCcccccccccccccCCccccccccCceeeccCCCCCCCCcccccccccceeeeCCCCccCccCcc
Q 037042 458 KLSGSIPACFGDLASLRNLSLASNELISVIPSTFWNLKDILYLNLSSNSLTGPLPLEIGNLKVLVKIDFSMNNFSGVIPN 537 (1002)
Q Consensus 458 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 537 (1002)
++.+...+|.++.+|+.+.+..+ +..+...+|.++.+|+.+.+.++.++.+....|.++.+|+.++|..+ ++.+...
T Consensus 251 -v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~ 327 (379)
T 4h09_A 251 -VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVY 327 (379)
T ss_dssp -CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTT
T ss_pred -ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHH
Confidence 33333344444444444444322 33333334444444444444444444333334444444444444322 3333333
Q ss_pred cccCCccccEEEc
Q 037042 538 AIGGIKDLQFLFL 550 (1002)
Q Consensus 538 ~~~~l~~L~~L~L 550 (1002)
+|.++.+|+.+.+
T Consensus 328 aF~~C~~L~~i~i 340 (379)
T 4h09_A 328 AFKNCKALSTISY 340 (379)
T ss_dssp TTTTCTTCCCCCC
T ss_pred HhhCCCCCCEEEE
Confidence 4444444444444
No 408
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.02 E-value=2.8e-12 Score=134.93 Aligned_cols=144 Identities=22% Similarity=0.249 Sum_probs=102.4
Q ss_pred CCcccccEeeCCCCcEEEEEeCC---CCCccccC-cccCCCCCCCEEEcccCCCCCCCCcc-cccccCCcE--EEecccc
Q 037042 40 FCNWTGVTCDVHSHRVTALNISH---LSLSGTIP-SRLGNLSSLQSLFLHSNQFSGSIPFS-IFNIHTLKL--LSFGDNQ 112 (1002)
Q Consensus 40 ~c~w~gv~c~~~~~~v~~L~l~~---~~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~--L~L~~N~ 112 (1002)
.|.|.|+.|+....+|+.+...+ ..+.|.++ +.+..|+. .|..++|.-++.++-+ |...+.|+. ++++.|+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 48999999998777887776654 23444443 23333333 3444555555554433 666777776 7888885
Q ss_pred cccccCcc---cCCCCCCCCEEeCCCCcccc--cCCccccCCCCCceEEcccccCCCCCcccccccc--ccceeeecccc
Q 037042 113 LSGEIPTN---ICSNLPFFESLNLSKNMFHG--GIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLT--KLEELYLSFNG 185 (1002)
Q Consensus 113 l~~~ip~~---~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~ 185 (1002)
.. .++.. +..++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.
T Consensus 155 ~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Np 231 (267)
T 3rw6_A 155 RS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNS 231 (267)
T ss_dssp HH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTST
T ss_pred HH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCc
Confidence 43 33321 23568999999999999997 5677888999999999999999865 3455555 99999999999
Q ss_pred ccc
Q 037042 186 LQG 188 (1002)
Q Consensus 186 l~~ 188 (1002)
+.+
T Consensus 232 l~~ 234 (267)
T 3rw6_A 232 LCD 234 (267)
T ss_dssp TGG
T ss_pred Ccc
Confidence 986
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.01 E-value=1.9e-08 Score=113.59 Aligned_cols=84 Identities=14% Similarity=0.122 Sum_probs=36.5
Q ss_pred ccCCCCCccEEEccCCccCccCCccccCCCCCCEEEccCCcccccCCccccCCccccEEEccCCcCCccCCccccCCccC
Q 037042 394 EIGNLTNLIGFYLGGNNLNGSIPITLGKLQKLQVLYFPDNKLEGSIPDEVCRLAKVYQLDLSNNKLSGSIPACFGDLASL 473 (1002)
Q Consensus 394 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 473 (1002)
.|.++.+|+.+.+..+ +..+....|.++++|+.+.+.++.++.....+|.++.+|+.++|..+ ++.+...+|.++++|
T Consensus 258 aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 335 (379)
T 4h09_A 258 LLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKAL 335 (379)
T ss_dssp TTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred ccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCC
Confidence 3444444444444322 33333344444444554444444444333344444444444444332 333333444444444
Q ss_pred cccccc
Q 037042 474 RNLSLA 479 (1002)
Q Consensus 474 ~~L~L~ 479 (1002)
+.+.+.
T Consensus 336 ~~i~ip 341 (379)
T 4h09_A 336 STISYP 341 (379)
T ss_dssp CCCCCC
T ss_pred CEEEEC
Confidence 444443
No 410
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.96 E-value=2.8e-10 Score=121.30 Aligned_cols=137 Identities=15% Similarity=0.069 Sum_probs=99.1
Q ss_pred cCCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCC--cceeeeEEecCchhhHHHHH
Q 037042 706 DGFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRN--IIKIISCCSIGDFKALFKAL 783 (1002)
Q Consensus 706 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~l 783 (1002)
..|......+.|..+.||++...+|+.+++|+.... ....+..|+++++.+.+.+ +.+++++...++ ..++
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~----~~~~ 92 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAG----RDWL 92 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS----CEEE
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCC----CCEE
Confidence 345443333456679999998777888999997643 2345788999999986544 556888776554 3469
Q ss_pred hhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCC------------------------------------
Q 037042 784 ALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY------------------------------------ 827 (1002)
Q Consensus 784 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 827 (1002)
||||++|.++. ... .+ ...++.+++++++.||...
T Consensus 93 v~e~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
T 1nd4_A 93 LLGEVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ 163 (264)
T ss_dssp EEECCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred EEEecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence 99999999884 211 11 2357788888899888421
Q ss_pred -------------------CCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 828 -------------------STPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 828 -------------------~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
...++|+|++|.||++++++.+.|+|||.+.
T Consensus 164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999877667799999874
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.84 E-value=9.2e-10 Score=122.18 Aligned_cols=103 Identities=15% Similarity=0.161 Sum_probs=54.3
Q ss_pred CCcEEEEEeCCCCCcc-c-------cCcccCCCCCCCEEEcccCCCC---------CCCCcccccccCCcEEEecccccc
Q 037042 52 SHRVTALNISHLSLSG-T-------IPSRLGNLSSLQSLFLHSNQFS---------GSIPFSIFNIHTLKLLSFGDNQLS 114 (1002)
Q Consensus 52 ~~~v~~L~l~~~~l~~-~-------~p~~l~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~L~~N~l~ 114 (1002)
..+|+.|.+....+.| . +.+++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3478899888776653 2 2445667889999988765432 123333444556666666555211
Q ss_pred cccCcccCCCCCCCCEEeCCCCcccccCCcccc--CCCCCceEEcc
Q 037042 115 GEIPTNICSNLPFFESLNLSKNMFHGGIPSALS--NCTYLRILRLS 158 (1002)
Q Consensus 115 ~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls 158 (1002)
.+|. + .+++|++|+|..+.++......+. .+++|++|+|+
T Consensus 186 -~l~~-~--~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 186 -SIGK-K--PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp -BCCS-C--BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred -eecc-c--cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 1222 1 145555555555554432222222 44555555553
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.80 E-value=7.8e-10 Score=122.78 Aligned_cols=84 Identities=18% Similarity=0.205 Sum_probs=50.4
Q ss_pred ccccceeeeCCCCccCccCccccc---CCccccEEEccCeeeccc----CCcccccccccceeccccccccCCCcccccC
Q 037042 517 NLKVLVKIDFSMNNFSGVIPNAIG---GIKDLQFLFLEYNILQGS----IPDSFGDLMSLKSLNLSNNNLSGSIPVSLEK 589 (1002)
Q Consensus 517 ~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 589 (1002)
.+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.|.+. ++..+..+++|+.|+|++|.|+...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 356777777777776543332332 467778888887777753 3334455677888888888776433222322
Q ss_pred -CCccceeeCCCCc
Q 037042 590 -LSYLKDLNLSFNK 602 (1002)
Q Consensus 590 -l~~L~~L~Ls~N~ 602 (1002)
+ ...+++++|+
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 2 2457777776
No 413
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.75 E-value=6.5e-09 Score=116.36 Aligned_cols=145 Identities=12% Similarity=0.111 Sum_probs=105.9
Q ss_pred CCceeeccCcceEEEEEeCCCcEEEEEEee--ccc-chhHHHHHHHHHHHHhcc--CCCcceeeeEEecCchhhHHHHHh
Q 037042 710 ENNLIGRGGFGSVYKARIQDGMEVAVKVFN--QQC-GRAFKSFDVECEVMKSIR--HRNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 710 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
..+.++.|.++.||+.+..+ ..+++|+.. ... ......+.+|+++++.+. +..+++++.++..... ....++|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~-~g~~~~v 119 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESV-IGRAFYI 119 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT-TSSCEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc-cCCeEEE
Confidence 35678999999999998764 678888765 322 122456888999999996 4568888888765531 1134689
Q ss_pred hccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCC-------------------------------------
Q 037042 785 LEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY------------------------------------- 827 (1002)
Q Consensus 785 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------- 827 (1002)
|||++|..+.+... ..++..++..++.+++++|+.||...
T Consensus 120 me~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 120 MEFVSGRVLWDQSL---PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp EECCCCBCCCCTTC---TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EEecCCeecCCCcc---ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 99999988854221 13677788899999999999999521
Q ss_pred ------------------CCCcEEccCCCCCeeeCCCCc--EEEeccccccc
Q 037042 828 ------------------STPVIHCDLKPSNVLLGDNMV--AHLSDFGITKL 859 (1002)
Q Consensus 828 ------------------~~~iiHrDlkp~NILl~~~~~--~kl~DfGla~~ 859 (1002)
...++|+|+++.||+++.++. +.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999987653 69999998864
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.71 E-value=2.9e-09 Score=116.23 Aligned_cols=192 Identities=15% Similarity=0.140 Sum_probs=123.5
Q ss_pred CceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCC--cceeeeEEecCchhhHHHHHhhcc
Q 037042 711 NNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRN--IIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
.+.++.|....||++. ..+++|+.... .....+.+|.++++.+. +.. +.+.+.+....+ .....++|||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~-~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSE-TYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCS-SCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC-CCCcceEEEcc
Confidence 4568999999999873 56899986432 34567889999999884 333 445554433222 11123678999
Q ss_pred CCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCC----------------------------------------
Q 037042 788 MPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGY---------------------------------------- 827 (1002)
Q Consensus 788 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~---------------------------------------- 827 (1002)
++|.++.+.... .++..++..++.++++.++.||...
T Consensus 98 i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 98 IKGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred cCCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 999988754332 2567777888889999988888411
Q ss_pred ---------------CCCcEEccCCCCCeeeCC--CCcEEEecccccccccCCCceeeeccC---CC---------Cccc
Q 037042 828 ---------------STPVIHCDLKPSNVLLGD--NMVAHLSDFGITKLLTREDQFVTQTQT---PA---------TIGY 878 (1002)
Q Consensus 828 ---------------~~~iiHrDlkp~NILl~~--~~~~kl~DfGla~~~~~~~~~~~~~~~---~g---------t~~y 878 (1002)
...++|+|++|.||++++ ...+.|+||+.+..-.+.......... .+ ..++
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 135899999999999987 566889999988653322111000000 00 0001
Q ss_pred cc-ccccCCCCcCcccchHHHHHHHHHHHhCCCCCcc
Q 037042 879 MA-LEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNE 914 (1002)
Q Consensus 879 ~a-PE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~ 914 (1002)
.. |+... ......+.|++|.++|.+.+|..+|..
T Consensus 255 ~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 255 KDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp SCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 11 11110 112236899999999999999887643
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.50 E-value=4.7e-09 Score=105.13 Aligned_cols=122 Identities=17% Similarity=0.150 Sum_probs=87.6
Q ss_pred cccCcccCCCCCCCEEEcccC-CCCCC----CCcccccccCCcEEEecccccccccCcc---cCCCCCCCCEEeCCCCcc
Q 037042 67 GTIPSRLGNLSSLQSLFLHSN-QFSGS----IPFSIFNIHTLKLLSFGDNQLSGEIPTN---ICSNLPFFESLNLSKNMF 138 (1002)
Q Consensus 67 ~~~p~~l~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ip~~---~~~~l~~L~~L~Ls~N~l 138 (1002)
..+...+...++|++|+|++| .+... +...+...++|++|+|++|+|...--.. .+...+.|++|+|++|.|
T Consensus 26 ~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i 105 (185)
T 1io0_A 26 ETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 105 (185)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred HHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcC
Confidence 344556777788888888888 77632 3445566678888888888886421111 123456789999999998
Q ss_pred ccc----CCccccCCCCCceEEc--ccccCCCC----Cccccccccccceeeeccccccc
Q 037042 139 HGG----IPSALSNCTYLRILRL--SYNDFAGG----IPKEIGNLTKLEELYLSFNGLQG 188 (1002)
Q Consensus 139 ~~~----~p~~~~~l~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 188 (1002)
+.. +...+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+..
T Consensus 106 ~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~~ 165 (185)
T 1io0_A 106 SGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGP 165 (185)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHHH
T ss_pred CHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCCh
Confidence 853 5667888899999999 88999743 34455666899999999999863
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.39 E-value=5.3e-08 Score=102.31 Aligned_cols=66 Identities=27% Similarity=0.321 Sum_probs=32.8
Q ss_pred cccccCceeeccCCCCCCC--CcccccccccceeeeCCCCccCccCcccccCCc--cccEEEccCeeecccC
Q 037042 492 WNLKDILYLNLSSNSLTGP--LPLEIGNLKVLVKIDFSMNNFSGVIPNAIGGIK--DLQFLFLEYNILQGSI 559 (1002)
Q Consensus 492 ~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~ 559 (1002)
.++++|+.|+|++|+|++. +|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~ 236 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTF 236 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGC
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcccc
Confidence 3455666666666666652 223444555555555555555543 2222222 4555555555544433
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.33 E-value=4.4e-08 Score=98.03 Aligned_cols=42 Identities=14% Similarity=0.152 Sum_probs=18.9
Q ss_pred ccCCCCCceEEcccccCCCC----Cccccccccccceeeecccccc
Q 037042 146 LSNCTYLRILRLSYNDFAGG----IPKEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 146 ~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
+...++|++|+|++|+|... +...+...++|++|+|++|.++
T Consensus 61 L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 61 LKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34444555555555554321 2222333344555555555554
No 418
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.31 E-value=1.3e-06 Score=95.76 Aligned_cols=136 Identities=17% Similarity=0.171 Sum_probs=100.9
Q ss_pred CCCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccC----CCcceeeeEEecCchhhHHHH
Q 037042 707 GFSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRH----RNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 707 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~~~~ 782 (1002)
.....+.++.|....||+. |+.+++|+.... .....+.+|.++++.+.+ ..+.+++++ + ..+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---~-----~~~ 103 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ---S-----DRF 103 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---C-----SSC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec---C-----CcE
Confidence 4566788999999999998 677899986432 224568899999998865 234555554 2 236
Q ss_pred HhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCC----------------------------------
Q 037042 783 LALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYS---------------------------------- 828 (1002)
Q Consensus 783 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~---------------------------------- 828 (1002)
+||||++|.++.+.... .++..+...++.++++.++.||....
T Consensus 104 lvme~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 104 NIMKYIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp EEEECCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEeecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 99999999998743321 25666677888888888888884321
Q ss_pred --------------------------CCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 829 --------------------------TPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 829 --------------------------~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
..++|+|++|.||+++.+..+.|+||+.+..
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999876679999998864
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.15 E-value=4.4e-06 Score=89.67 Aligned_cols=77 Identities=14% Similarity=0.162 Sum_probs=60.5
Q ss_pred CCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCC---CcceeeeEEecCchhhHHHHHhh
Q 037042 709 SENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHR---NIIKIISCCSIGDFKALFKALAL 785 (1002)
Q Consensus 709 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~lv~ 785 (1002)
...+.||.|.++.||+++..+|+.++||+...........+..|++.++.+++. .+++++++. ..++||
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~--------~~~lvm 89 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD--------DRTLAM 89 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--------TTEEEE
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec--------CcEEEE
Confidence 345779999999999999888999999996543333346789999999999765 577887763 136999
Q ss_pred ccCCCCCh
Q 037042 786 EYMPHGSL 793 (1002)
Q Consensus 786 e~~~~g~L 793 (1002)
||++++++
T Consensus 90 e~l~g~~~ 97 (288)
T 3d1u_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EecccCCC
Confidence 99999875
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.04 E-value=5.9e-06 Score=89.76 Aligned_cols=136 Identities=15% Similarity=0.111 Sum_probs=93.3
Q ss_pred CceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCC---CcceeeeEEecCchhhHHHHHhhcc
Q 037042 711 NNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHR---NIIKIISCCSIGDFKALFKALALEY 787 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~lv~e~ 787 (1002)
.+.++.|....||+. |..++||+-.. ......+.+|.++++.+.+. .|.+.+.++.... ...++||||
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~---g~~~~v~e~ 94 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSD---GNPFVGYRK 94 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTT---SCEEEEEEC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCC---CceEEEEec
Confidence 456888988999998 56788998432 23456789999999999642 3566666664221 123599999
Q ss_pred CCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcC-----------------------------------------
Q 037042 788 MPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG----------------------------------------- 826 (1002)
Q Consensus 788 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~----------------------------------------- 826 (1002)
++|.++.+.... .++..+...++.++++.++.||..
T Consensus 95 i~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 95 VQGQILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp CCSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred cCCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 999888763221 134445555566666666666532
Q ss_pred ----------------CCCCcEEccCCCCCeeeCC---CCc-EEEecccccc
Q 037042 827 ----------------YSTPVIHCDLKPSNVLLGD---NMV-AHLSDFGITK 858 (1002)
Q Consensus 827 ----------------~~~~iiHrDlkp~NILl~~---~~~-~kl~DfGla~ 858 (1002)
....++|+|++|.||+++. ++. +.|+||+.+.
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 1335799999999999987 455 5899999775
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.00 E-value=1.3e-05 Score=85.47 Aligned_cols=134 Identities=16% Similarity=0.062 Sum_probs=96.6
Q ss_pred eeeccCcc-eEEEEEeC-CCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHHHhhccCC
Q 037042 713 LIGRGGFG-SVYKARIQ-DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKALALEYMP 789 (1002)
Q Consensus 713 ~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 789 (1002)
.+..|..| .||+.... ++..++||+-... ....+.+|...++.+. +--|.++++++...+ ..++|||+++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~----~~~lvme~l~ 103 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD----DAWLLTTAIP 103 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT----EEEEEEECCC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC----eEEEEEEeeC
Confidence 45556555 69988754 5678999986532 3567888999999884 434778888877665 3469999999
Q ss_pred CCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcC-------------------------------------------
Q 037042 790 HGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFG------------------------------------------- 826 (1002)
Q Consensus 790 ~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------------------------------------------- 826 (1002)
|.++.+...... .....++.+++..++.||..
T Consensus 104 G~~~~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 104 GKTAFQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp SEEHHHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred CccccccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 988877654321 22345677778888888841
Q ss_pred ------------CCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 827 ------------YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 827 ------------~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
....++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01237999999999999987777899999774
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.86 E-value=1.6e-05 Score=88.35 Aligned_cols=142 Identities=10% Similarity=0.120 Sum_probs=88.5
Q ss_pred CCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCC--cceeeeEEecCchhhHHHHHhhc
Q 037042 709 SENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRN--IIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 709 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
...+.++.|....||+.+. +|+.+++|+.... ..+..|+.+++.+.... +.++++++...+ ...++|||
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~---g~~~lv~e 114 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSE---SLTYCISR 114 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS---SCEEEEEE
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCC---CCeEEEEE
Confidence 3456789999999999876 4788999987532 25888999999886433 566777665432 13468999
Q ss_pred cCCCCChhHh------------------hhccCC----------------cCCHHHH---------------------HH
Q 037042 787 YMPHGSLEKY------------------LYSSNY----------------ILDIFQR---------------------LN 811 (1002)
Q Consensus 787 ~~~~g~L~~~------------------l~~~~~----------------~l~~~~~---------------------~~ 811 (1002)
|++|.++.+. ++.... .-.|... ..
T Consensus 115 ~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~ 194 (362)
T 3ovc_A 115 RAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSAS 194 (362)
T ss_dssp CCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHH
T ss_pred ecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 9998766421 010000 0001000 01
Q ss_pred HHHHHHHHHHHHHcCC-CCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 812 IMIDVASALEYLYFGY-STPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 812 i~~~ia~~l~~LH~~~-~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
....+....+++.... ...++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 195 ~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 195 VAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 1111222222332111 25689999999999998877888999998864
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.83 E-value=1.1e-05 Score=89.98 Aligned_cols=83 Identities=10% Similarity=0.009 Sum_probs=55.7
Q ss_pred cee-eccCcceEEEEEeC-------CCcEEEEEEeeccc---chhHHHHHHHHHHHHhcc-C--CCcceeeeEEecCchh
Q 037042 712 NLI-GRGGFGSVYKARIQ-------DGMEVAVKVFNQQC---GRAFKSFDVECEVMKSIR-H--RNIIKIISCCSIGDFK 777 (1002)
Q Consensus 712 ~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~~ 777 (1002)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.+. + ..+.+++.++.....
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~- 104 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV- 104 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT-
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc-
Confidence 567 78889999998754 26788999865432 101245788999998884 3 357778887755421
Q ss_pred hHHHHHhhccCCCCChhH
Q 037042 778 ALFKALALEYMPHGSLEK 795 (1002)
Q Consensus 778 ~~~~~lv~e~~~~g~L~~ 795 (1002)
....++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 112358999999877654
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.62 E-value=9.7e-05 Score=83.44 Aligned_cols=75 Identities=12% Similarity=0.136 Sum_probs=48.3
Q ss_pred CceeeccCcceEEEEEeC-CCcEEEEEEeecccc-------hhHHHHHHHHHHHHhccC--C-CcceeeeEEecCchhhH
Q 037042 711 NNLIGRGGFGSVYKARIQ-DGMEVAVKVFNQQCG-------RAFKSFDVECEVMKSIRH--R-NIIKIISCCSIGDFKAL 779 (1002)
Q Consensus 711 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~~ 779 (1002)
.+.+|.|..+.||+++.. +++.|+||....... .....+..|.++++.+.. + .+.+++.+.. +
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d~--~---- 108 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDT--E---- 108 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEET--T----
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEcC--C----
Confidence 467899999999999754 468899998653211 123456778999888742 3 3445665432 2
Q ss_pred HHHHhhccCCCC
Q 037042 780 FKALALEYMPHG 791 (1002)
Q Consensus 780 ~~~lv~e~~~~g 791 (1002)
..++||||+++.
T Consensus 109 ~~~lvmE~l~g~ 120 (397)
T 2olc_A 109 MAVTVMEDLSHL 120 (397)
T ss_dssp TTEEEECCCTTS
T ss_pred ccEEEEEeCCCc
Confidence 235899999764
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.51 E-value=0.00011 Score=81.24 Aligned_cols=138 Identities=17% Similarity=0.177 Sum_probs=77.4
Q ss_pred ceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc--CCCcceeeeE------EecCchhhHHHHH
Q 037042 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR--HRNIIKIISC------CSIGDFKALFKAL 783 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~------~~~~~~~~~~~~l 783 (1002)
+.|+.|..+.||+....+| .+++|+.... ...+..|.++++.+. .-.+.+++.. ....+ ..++
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~----~~~~ 108 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGS----FLFV 108 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETT----EEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECC----EEEE
Confidence 4566677899999987655 5899998752 233445666666553 1223444331 11111 2358
Q ss_pred hhccCCCCChh--------------HhhhccCC-------------cCCHHHH---------------------------
Q 037042 784 ALEYMPHGSLE--------------KYLYSSNY-------------ILDIFQR--------------------------- 809 (1002)
Q Consensus 784 v~e~~~~g~L~--------------~~l~~~~~-------------~l~~~~~--------------------------- 809 (1002)
||||++|.++. ..++.... ...|...
T Consensus 109 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 188 (346)
T 2q83_A 109 VYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLY 188 (346)
T ss_dssp EEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred EEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHH
Confidence 89999886542 11111000 0122110
Q ss_pred ----HHHHHHHHHHHHHHHc----------CCCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 810 ----LNIMIDVASALEYLYF----------GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 810 ----~~i~~~ia~~l~~LH~----------~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
..+...+.+++++|+. .....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 189 LQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666652 125789999999999999888899999999764
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.42 E-value=3.1e-05 Score=75.24 Aligned_cols=83 Identities=14% Similarity=0.125 Sum_probs=40.7
Q ss_pred cceeeeCCCCccCccCcccccCCccccEEEccCee-ecccCCcccccc----cccceecccccc-ccCCCcccccCCCcc
Q 037042 520 VLVKIDFSMNNFSGVIPNAIGGIKDLQFLFLEYNI-LQGSIPDSFGDL----MSLKSLNLSNNN-LSGSIPVSLEKLSYL 593 (1002)
Q Consensus 520 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L 593 (1002)
.|+.||+|++.|+..--..+.++++|+.|+|+++. |++.--..++.+ ++|+.|+|++|. ||..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 35555555555544333444555555555555553 443332333332 246666666653 543322344455666
Q ss_pred ceeeCCCCc
Q 037042 594 KDLNLSFNK 602 (1002)
Q Consensus 594 ~~L~Ls~N~ 602 (1002)
+.|+|++.+
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666665543
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.39 E-value=3e-05 Score=75.30 Aligned_cols=36 Identities=11% Similarity=0.013 Sum_probs=22.2
Q ss_pred CCCceEEccccc-CCCCCccccccccccceeeecccc
Q 037042 150 TYLRILRLSYND-FAGGIPKEIGNLTKLEELYLSFNG 185 (1002)
Q Consensus 150 ~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~ 185 (1002)
++|++|+|++|. ++..--..+.++++|++|+|+++.
T Consensus 114 ~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 114 KSMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 357777777763 553323345667777777777764
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.25 E-value=0.00058 Score=73.18 Aligned_cols=78 Identities=14% Similarity=0.164 Sum_probs=56.8
Q ss_pred CCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-C--CCcceeeeEEecCchhhHHHHHh
Q 037042 708 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-H--RNIIKIISCCSIGDFKALFKALA 784 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~~~~~~~lv 784 (1002)
....+.+|.|..+.||+.+..+|+.|+||+-..........+..|++.|+.+. . --+.+++++. .. ++|
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~~------~lv 88 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD--DR------TLA 88 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--TT------EEE
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc--Cc------eEE
Confidence 44557789999999999999999999999876544334456889999999884 2 2355555542 22 478
Q ss_pred hccCCCCCh
Q 037042 785 LEYMPHGSL 793 (1002)
Q Consensus 785 ~e~~~~g~L 793 (1002)
|||++++..
T Consensus 89 ~e~l~~~~~ 97 (288)
T 3f7w_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEeecccCC
Confidence 899877643
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.16 E-value=0.0006 Score=73.60 Aligned_cols=137 Identities=12% Similarity=0.078 Sum_probs=88.9
Q ss_pred CCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc---CCCcceeeeEEecCchhhHHHHHhhc
Q 037042 710 ENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR---HRNIIKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 710 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~lv~e 786 (1002)
..+.|+.|....+|+.+.. +..++||+.... ....+..|.+.++.+. ...+++.++++...+ ..++|||
T Consensus 40 ~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g----~~~lvme 111 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG----HSFLLLE 111 (312)
T ss_dssp EEEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS----EEEEEEE
T ss_pred eeEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC----ceEEEEE
Confidence 3467899999999999864 678889987643 3567888999998884 356888888776543 3469999
Q ss_pred cCCCCChhH-----------hhhccCC---------------------cCCHHHHH---HHHH----------------H
Q 037042 787 YMPHGSLEK-----------YLYSSNY---------------------ILDIFQRL---NIMI----------------D 815 (1002)
Q Consensus 787 ~~~~g~L~~-----------~l~~~~~---------------------~l~~~~~~---~i~~----------------~ 815 (1002)
|+++..+.. .++.... .-+|.... ++.. .
T Consensus 112 ~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~ 191 (312)
T 3jr1_A 112 ALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDL 191 (312)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHH
T ss_pred eccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Confidence 999876521 1222110 11343221 1111 1
Q ss_pred HH-HHHHHHH-cCCCCCcEEccCCCCCeeeCCCCcEEEeccc
Q 037042 816 VA-SALEYLY-FGYSTPVIHCDLKPSNVLLGDNMVAHLSDFG 855 (1002)
Q Consensus 816 ia-~~l~~LH-~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 855 (1002)
+. .....|. ......++|+|+.+.|++++.++ +.|.||.
T Consensus 192 l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 192 IVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11 1122332 12256799999999999999887 8899974
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.08 E-value=0.0015 Score=60.39 Aligned_cols=57 Identities=18% Similarity=0.190 Sum_probs=35.7
Q ss_pred EEeCCCCccc-ccCCccccCCCCCceEEcccccCCCCCccccccccccceeeeccccccc
Q 037042 130 SLNLSKNMFH-GGIPSALSNCTYLRILRLSYNDFAGGIPKEIGNLTKLEELYLSFNGLQG 188 (1002)
Q Consensus 130 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 188 (1002)
.++.+++.++ ..+|..+. ++|++|+|++|+|+...+..|..+++|++|+|++|.+.=
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 4566666664 24443322 256777777777775555567777777777777777654
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.03 E-value=0.0013 Score=74.77 Aligned_cols=80 Identities=11% Similarity=0.071 Sum_probs=49.4
Q ss_pred CCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCC---CcCcccchHHHHHHHHH
Q 037042 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEG---RVSTNGDVYNFGVMLME 904 (1002)
Q Consensus 828 ~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~e 904 (1002)
...++|+|++|.||+++.++ ++++||+.+..-.+.-.... ....-...|.+|+..... .-....++......+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGA-YLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHH-HHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHH-HHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 67899999999999998776 99999998864322111000 000011346666654321 12233556688888888
Q ss_pred HHhCC
Q 037042 905 TFTGK 909 (1002)
Q Consensus 905 lltg~ 909 (1002)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87753
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.02 E-value=0.00017 Score=71.50 Aligned_cols=43 Identities=21% Similarity=0.203 Sum_probs=21.1
Q ss_pred cccCCCCCceEEcccccCCC----CCccccccccccceeeecccccc
Q 037042 145 ALSNCTYLRILRLSYNDFAG----GIPKEIGNLTKLEELYLSFNGLQ 187 (1002)
Q Consensus 145 ~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 187 (1002)
.+..-+.|+.|+|++|+|.. .+...+..-+.|++|+|++|.|+
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 34444555555555555542 12223333445555555555554
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.90 E-value=0.00087 Score=72.32 Aligned_cols=131 Identities=11% Similarity=0.134 Sum_probs=77.0
Q ss_pred CCCCceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCCc-ceeeeEEecCchhhHHHHHhhc
Q 037042 708 FSENNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNI-IKIISCCSIGDFKALFKALALE 786 (1002)
Q Consensus 708 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~lv~e 786 (1002)
+...+.|+.|....+|+. +.+++|+....... .....+|+.+++.+....+ .+++++....+ ++|+|
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~~~~------~~v~e 87 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDPATG------VMVTR 87 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTTTC------CEEEE
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEECCCC------EEEEe
Confidence 444678999999999998 56889987643211 1223568888877743223 45665443222 47899
Q ss_pred cC-CCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHc----------------------------------------
Q 037042 787 YM-PHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYF---------------------------------------- 825 (1002)
Q Consensus 787 ~~-~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~---------------------------------------- 825 (1002)
|+ ++.++...-... +..++.++++.|+-+|.
T Consensus 88 ~i~~g~~l~~~~~~~--------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (301)
T 3dxq_A 88 YIAGAQTMSPEKFKT--------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREA 159 (301)
T ss_dssp CCTTCEECCHHHHHH--------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHH
T ss_pred ecCCCccCCHhhHhh--------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHH
Confidence 99 665553210000 00122222222222221
Q ss_pred ----------CCCCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 826 ----------GYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 826 ----------~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
.....++|+|+.+.||+ ..++.+.++||..+..
T Consensus 160 ~~l~~~l~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 160 GGVRSALAAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp HHHHHHHHSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 11345899999999999 5566789999998753
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.62 E-value=0.0028 Score=69.38 Aligned_cols=139 Identities=12% Similarity=0.053 Sum_probs=72.2
Q ss_pred ceeeccCcce-EEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhcc-C-CCcceeeeEEecCchhhHHHHHhhccC
Q 037042 712 NLIGRGGFGS-VYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-H-RNIIKIISCCSIGDFKALFKALALEYM 788 (1002)
Q Consensus 712 ~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~niv~~~~~~~~~~~~~~~~~lv~e~~ 788 (1002)
+.|+.|+... +|+....+|+.+++|...... ...+..|+.+++.+. + -.+.+++.+....+ ++|||++
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g------~ll~e~l 94 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG------LLLIEDL 94 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT------EEEECCC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC------EEEEeeC
Confidence 3455554444 677765446778888654321 123456777777774 2 23556666532221 4788988
Q ss_pred CCCChhHhhhccC-------------------------CcCCHHHHH-------H-------------HHHHHHHHHHHH
Q 037042 789 PHGSLEKYLYSSN-------------------------YILDIFQRL-------N-------------IMIDVASALEYL 823 (1002)
Q Consensus 789 ~~g~L~~~l~~~~-------------------------~~l~~~~~~-------~-------------i~~~ia~~l~~L 823 (1002)
.+..+.+++.... ...+..... . ....+...++.+
T Consensus 95 ~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l 174 (333)
T 3csv_A 95 GDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQI 174 (333)
T ss_dssp CSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred CCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 7766644332110 001111000 0 001111222222
Q ss_pred H---cCCCCCcEEccCCCCCeeeCCC----CcEEEeccccccc
Q 037042 824 Y---FGYSTPVIHCDLKPSNVLLGDN----MVAHLSDFGITKL 859 (1002)
Q Consensus 824 H---~~~~~~iiHrDlkp~NILl~~~----~~~kl~DfGla~~ 859 (1002)
. ......++|+|+.+.||+++.+ +.+.|+||+.+..
T Consensus 175 ~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 175 LSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred HHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1 1125679999999999999874 6899999998763
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.58 E-value=0.00034 Score=69.23 Aligned_cols=62 Identities=11% Similarity=0.165 Sum_probs=26.6
Q ss_pred CCccEEEccCC-ccCc----cCCccccCCCCCCEEEccCCccccc----CCccccCCccccEEEccCCcCC
Q 037042 399 TNLIGFYLGGN-NLNG----SIPITLGKLQKLQVLYFPDNKLEGS----IPDEVCRLAKVYQLDLSNNKLS 460 (1002)
Q Consensus 399 ~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 460 (1002)
+.|++|+|++| +|.. .+...+..-+.|+.|+|++|.|... +.+.+..-+.|+.|+|++|.|.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 44555555543 4431 1223334444555555555555421 1222223344555555555544
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.57 E-value=0.0037 Score=69.31 Aligned_cols=138 Identities=12% Similarity=0.132 Sum_probs=80.5
Q ss_pred ceeeccCcceEEEEEeC--------CCcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHH
Q 037042 712 NLIGRGGFGSVYKARIQ--------DGMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
+.+..|-...+|+.... +++.|++|+.... ........+|.++++.+. +.-..++++++.. +
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~-g------- 126 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE-G------- 126 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT-E-------
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC-c-------
Confidence 56777888899999864 2578999986332 223456678999998884 3334566666532 1
Q ss_pred HhhccCCCCChhHh-----------------hhccC----CcCC--HHHHHHHHHHHHH-------------------HH
Q 037042 783 LALEYMPHGSLEKY-----------------LYSSN----YILD--IFQRLNIMIDVAS-------------------AL 820 (1002)
Q Consensus 783 lv~e~~~~g~L~~~-----------------l~~~~----~~l~--~~~~~~i~~~ia~-------------------~l 820 (1002)
+||||++|.++..- ++... .... +.++.++..++.. .+
T Consensus 127 ~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~ 206 (379)
T 3feg_A 127 RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEM 206 (379)
T ss_dssp EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHH
T ss_pred cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHH
Confidence 78999988665311 11111 1111 2333333333211 22
Q ss_pred HHHH----c-CCCCCcEEccCCCCCeeeCCC----CcEEEecccccc
Q 037042 821 EYLY----F-GYSTPVIHCDLKPSNVLLGDN----MVAHLSDFGITK 858 (1002)
Q Consensus 821 ~~LH----~-~~~~~iiHrDlkp~NILl~~~----~~~kl~DfGla~ 858 (1002)
+.|. . .....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 207 ~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 207 GNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2222 1 123569999999999999876 789999998775
No 437
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.55 E-value=0.0023 Score=69.71 Aligned_cols=159 Identities=14% Similarity=0.135 Sum_probs=83.7
Q ss_pred cCHHHHHHhhcCCCC-----CceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCCC--cceee
Q 037042 696 FSYLELCQATDGFSE-----NNLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRN--IIKII 768 (1002)
Q Consensus 696 ~~~~~~~~~~~~~~~-----~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~ 768 (1002)
++.+++......|.. .+.|+.|....||+....+| .+++|+..... ....+..|+.+++.+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 344455555555654 24466788889999987655 68899887521 2234566888877774212 33333
Q ss_pred eEEecCch---hhHHHHHhhccCCCCChhH--------------hhhcc----CCc----C---CHHHHHH---------
Q 037042 769 SCCSIGDF---KALFKALALEYMPHGSLEK--------------YLYSS----NYI----L---DIFQRLN--------- 811 (1002)
Q Consensus 769 ~~~~~~~~---~~~~~~lv~e~~~~g~L~~--------------~l~~~----~~~----l---~~~~~~~--------- 811 (1002)
... .+.. .....+++++|++|..+.. .++.. ... . .|.....
T Consensus 84 ~~~-~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 84 PRK-DGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CBT-TCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred CCC-CCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 211 0000 0002257788888764321 01111 000 0 1211000
Q ss_pred ---HHHHHHHHHHHHHcC----CCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 812 ---IMIDVASALEYLYFG----YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 812 ---i~~~ia~~l~~LH~~----~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
+...+.+.+++++.. ...+++|+|+.+.||+++.++.+.|+||+.+.
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455555421 24579999999999999887666899998764
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.53 E-value=0.0031 Score=58.20 Aligned_cols=56 Identities=25% Similarity=0.278 Sum_probs=35.5
Q ss_pred EEEecccccc-cccCcccCCCCCCCCEEeCCCCcccccCCccccCCCCCceEEcccccCC
Q 037042 105 LLSFGDNQLS-GEIPTNICSNLPFFESLNLSKNMFHGGIPSALSNCTYLRILRLSYNDFA 163 (1002)
Q Consensus 105 ~L~L~~N~l~-~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 163 (1002)
.++.+++.|+ ..+|..+ -++|++|+|++|+|+...+..|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l---p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF---PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC---CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC---CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4455555553 2455443 234677777777777555666777888888888888664
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.48 E-value=0.0043 Score=70.34 Aligned_cols=72 Identities=18% Similarity=0.211 Sum_probs=48.3
Q ss_pred ceeeccCcceEEEEEeCC--------CcEEEEEEeecccchhHHHHHHHHHHHHhccCCC-cceeeeEEecCchhhHHHH
Q 037042 712 NLIGRGGFGSVYKARIQD--------GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRN-IIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~~ 782 (1002)
+.|+.|....||++...+ ++.|++|+..... ....+..|..+++.+...+ ..++++.+.. .
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~--------g 148 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG--------G 148 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT--------E
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC--------C
Confidence 567888889999998653 5789999874321 1144557999988885333 3566765531 1
Q ss_pred HhhccCCCCCh
Q 037042 783 LALEYMPHGSL 793 (1002)
Q Consensus 783 lv~e~~~~g~L 793 (1002)
+|+||++|.++
T Consensus 149 ~v~e~l~G~~l 159 (429)
T 1nw1_A 149 RLEEYIPSRPL 159 (429)
T ss_dssp EEECCCCEEEC
T ss_pred EEEEEeCCccc
Confidence 78899876444
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.45 E-value=0.0065 Score=69.18 Aligned_cols=73 Identities=15% Similarity=0.171 Sum_probs=47.6
Q ss_pred ceeeccCcceEEEEEeCC-CcEEEEEEeecccchhHHHHHHHHHHHHhccCCCc-ceeeeEEecCchhhHHHHHhhccCC
Q 037042 712 NLIGRGGFGSVYKARIQD-GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRNI-IKIISCCSIGDFKALFKALALEYMP 789 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~lv~e~~~ 789 (1002)
+.|+.|-...+|+....+ +..|++|+........ ....+|..+++.+...++ .++++++. +. +||||++
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~-~G-------~v~e~I~ 184 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT-NG-------RIEEFMD 184 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET-TE-------EEEECCC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC-Ce-------EEEEeeC
Confidence 568888889999998765 5788999875432211 122578999998864444 56777662 22 4899998
Q ss_pred CCCh
Q 037042 790 HGSL 793 (1002)
Q Consensus 790 ~g~L 793 (1002)
|.++
T Consensus 185 G~~l 188 (458)
T 2qg7_A 185 GYAL 188 (458)
T ss_dssp SEEC
T ss_pred CccC
Confidence 7554
No 441
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.45 E-value=0.011 Score=58.61 Aligned_cols=105 Identities=12% Similarity=0.049 Sum_probs=70.4
Q ss_pred CChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeec
Q 037042 791 GSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQT 870 (1002)
Q Consensus 791 g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 870 (1002)
-+|.+.+...+.++++.+++.++.|.+++|.-+-. .+.-..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc------------
Confidence 48999999999999999999999999999887621 11101223456889999999998764 1110
Q ss_pred cCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCc
Q 037042 871 QTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTN 913 (1002)
Q Consensus 871 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~ 913 (1002)
.....+.|||... ...+.+.=|||+|+++|.-+--..|-.
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~ 137 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN 137 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc
Confidence 0112366888753 345788899999999999888655543
No 442
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.22 E-value=0.0069 Score=66.02 Aligned_cols=141 Identities=10% Similarity=0.097 Sum_probs=78.6
Q ss_pred ceeeccCcceEEEEEeCCCcEEEEEEeecccchhHHHHHHHHHHHHhccCC--CcceeeeEEecCch---hhHHHHHhhc
Q 037042 712 NLIGRGGFGSVYKARIQDGMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHR--NIIKIISCCSIGDF---KALFKALALE 786 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~~~---~~~~~~lv~e 786 (1002)
..++ |....||+....+|+.+++|+.+... .....+..|..+++.+... .+++++.. .+.. .....++|||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~--~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAF--NGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCB--TTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeec--CCcEEEEECCEEEEEEE
Confidence 4566 88889999887778789999986432 1245667788888877422 24444443 1110 0012245788
Q ss_pred cCCCCChhH----h----------hhc----c----CCcCCHHHH----HH---------------HHHHHHHHHHHHHc
Q 037042 787 YMPHGSLEK----Y----------LYS----S----NYILDIFQR----LN---------------IMIDVASALEYLYF 825 (1002)
Q Consensus 787 ~~~~g~L~~----~----------l~~----~----~~~l~~~~~----~~---------------i~~~ia~~l~~LH~ 825 (1002)
|++|..+.. . ++. . ....++... .. +...+.+.++.+..
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 887754320 0 111 0 001121110 00 01111122233221
Q ss_pred C----CCCCcEEccCCCCCeeeCCCCcEEEecccccc
Q 037042 826 G----YSTPVIHCDLKPSNVLLGDNMVAHLSDFGITK 858 (1002)
Q Consensus 826 ~----~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 858 (1002)
. ....++|+|+++.||+++ + .+.|+||+.+.
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 1 245689999999999999 4 89999998764
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.89 E-value=0.0084 Score=66.59 Aligned_cols=73 Identities=12% Similarity=0.221 Sum_probs=43.5
Q ss_pred ceeeccCcceEEEEEeCC---------CcEEEEEEeecccchhHHHHHHHHHHHHhccCCC-cceeeeEEecCchhhHHH
Q 037042 712 NLIGRGGFGSVYKARIQD---------GMEVAVKVFNQQCGRAFKSFDVECEVMKSIRHRN-IIKIISCCSIGDFKALFK 781 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~ 781 (1002)
+.++.|....+|+....+ ++.+++|+....... ......|.++++.+...+ +.++++.. .+
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~------ 109 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--NG------ 109 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT------
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--CC------
Confidence 467788888999998654 268889987543221 123467888888885333 44666543 11
Q ss_pred HHhhccCCCCCh
Q 037042 782 ALALEYMPHGSL 793 (1002)
Q Consensus 782 ~lv~e~~~~g~L 793 (1002)
++||||++|.++
T Consensus 110 ~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 GRIEEWLYGDPL 121 (369)
T ss_dssp EEEEECCCSEEC
T ss_pred cEEEEEecCCcC
Confidence 368888887543
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.06 E-value=0.018 Score=62.99 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=28.0
Q ss_pred CCCcEEccCCCCCeeeCCCCcEEEeccccccc
Q 037042 828 STPVIHCDLKPSNVLLGDNMVAHLSDFGITKL 859 (1002)
Q Consensus 828 ~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 859 (1002)
...++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35699999999999999888899999987753
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.56 E-value=0.064 Score=59.54 Aligned_cols=139 Identities=14% Similarity=0.135 Sum_probs=79.7
Q ss_pred ceeeccCcceEEEEEeCC--------CcEEEEEEeecccch------------------hHHHHHHHHHHHHhcc-CCCc
Q 037042 712 NLIGRGGFGSVYKARIQD--------GMEVAVKVFNQQCGR------------------AFKSFDVECEVMKSIR-HRNI 764 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~-h~ni 764 (1002)
+.|..|-...+|+....+ ++.|.+++.-...+. ..+....|..+++.+. +--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999988653 367888886543211 0112234888888884 4445
Q ss_pred ceeeeEEecCchhhHHHHHhhccCCCCChhH--h---------------hhccC----CcCC--HHHHHHHHHHHH----
Q 037042 765 IKIISCCSIGDFKALFKALALEYMPHGSLEK--Y---------------LYSSN----YILD--IFQRLNIMIDVA---- 817 (1002)
Q Consensus 765 v~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~~----~~l~--~~~~~~i~~~ia---- 817 (1002)
.++++++.. + +|+||++|-+|.. + ++... .... +....++..++.
T Consensus 138 Pkl~~~~~~-G-------~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~ 209 (401)
T 3f2s_A 138 PKLYGIFPQ-G-------RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKF 209 (401)
T ss_dssp CCEEEEETT-E-------EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCC
T ss_pred CeEEEEeCC-C-------eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccC
Confidence 667776532 1 7889998755521 1 01110 1112 122222332221
Q ss_pred ------------------HHH----HHHHc-CCCCCcEEccCCCCCeeeCCC------CcEEEecccccc
Q 037042 818 ------------------SAL----EYLYF-GYSTPVIHCDLKPSNVLLGDN------MVAHLSDFGITK 858 (1002)
Q Consensus 818 ------------------~~l----~~LH~-~~~~~iiHrDlkp~NILl~~~------~~~kl~DfGla~ 858 (1002)
+.+ +++.. .....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 210 ~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 210 TEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp CSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred cchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 22321 124568999999999999876 789999998764
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.96 E-value=0.057 Score=60.60 Aligned_cols=73 Identities=15% Similarity=0.209 Sum_probs=47.7
Q ss_pred ceeeccCcceEEEEEeCC--------CcEEEEEEeecccchhHHHHHHHHHHHHhcc-CCCcceeeeEEecCchhhHHHH
Q 037042 712 NLIGRGGFGSVYKARIQD--------GMEVAVKVFNQQCGRAFKSFDVECEVMKSIR-HRNIIKIISCCSIGDFKALFKA 782 (1002)
Q Consensus 712 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 782 (1002)
+.+..|-...+|+....+ ++.|++|+..... .......+|.++++.+. +.-..++++.+ .+ +
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~~------~ 146 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF--PE------G 146 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--TT------E
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--CC------C
Confidence 457778888999998653 5789999865432 22223467888888884 33345556533 22 4
Q ss_pred HhhccCCCCCh
Q 037042 783 LALEYMPHGSL 793 (1002)
Q Consensus 783 lv~e~~~~g~L 793 (1002)
.|+||++|.++
T Consensus 147 ~I~efI~G~~l 157 (424)
T 3mes_A 147 RIEEFIDGEPL 157 (424)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEeCCccC
Confidence 78999998664
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.65 E-value=0.28 Score=54.74 Aligned_cols=29 Identities=28% Similarity=0.387 Sum_probs=24.9
Q ss_pred CcEEccCCCCCeee------CCCCcEEEecccccc
Q 037042 830 PVIHCDLKPSNVLL------GDNMVAHLSDFGITK 858 (1002)
Q Consensus 830 ~iiHrDlkp~NILl------~~~~~~kl~DfGla~ 858 (1002)
.++|+|+.+.||++ +++..++++||..|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 36799999999999 456789999999875
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=75.02 E-value=0.42 Score=54.32 Aligned_cols=61 Identities=11% Similarity=0.061 Sum_probs=18.2
Q ss_pred CCceeeccCcceEEEEEeCC-CcEEEE------EEeeccc--chhHHHHHHHHHHHHhccCCCcceeeeEEec
Q 037042 710 ENNLIGRGGFGSVYKARIQD-GMEVAV------KVFNQQC--GRAFKSFDVECEVMKSIRHRNIIKIISCCSI 773 (1002)
Q Consensus 710 ~~~~lG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 773 (1002)
..+.+| ||+||+|.+.. ..+||| |..+... ......+.+|..+++..+|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 345566 99999998764 467888 6654321 2233567788999999999999999887654
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=61.18 E-value=3.7 Score=29.08 Aligned_cols=22 Identities=18% Similarity=0.233 Sum_probs=9.0
Q ss_pred eEeeeeccchhhHHHHHHHHHh
Q 037042 651 ILLGIFLPLSTIFMIAVILLIA 672 (1002)
Q Consensus 651 ~~~~i~~~~~~~~~i~v~l~~~ 672 (1002)
+..+++.+++.++++++.++++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~ 34 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLF 34 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHHHHHHHHHHH
Confidence 3344444444444444333333
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=47.15 E-value=14 Score=36.53 Aligned_cols=121 Identities=10% Similarity=0.164 Sum_probs=78.2
Q ss_pred cCCCcceeeeEEecCchhhHHHHHhhccCCCCChhHhhhccCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCcEEccCCCC
Q 037042 760 RHRNIIKIISCCSIGDFKALFKALALEYMPHGSLEKYLYSSNYILDIFQRLNIMIDVASALEYLYFGYSTPVIHCDLKPS 839 (1002)
Q Consensus 760 ~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iiHrDlkp~ 839 (1002)
.||+.+.. .+-...+ .++..|-.......+-.-. ..+...+++++..|+....+++ . =+|--+.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD------~v~~~y~~~~~~~~f~~ik--~~~~~eKlr~l~ni~~l~~~~~---~--r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRD------SFQIHYDINDNHTPFDNIK--SFTKNEKLRYLLNIKNLEEVNR---T--RYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSS------EEEEEECCCTTSEEGGGGG--GSCHHHHHHHHHHGGGGGGGGG---S--SEECCCSGG
T ss_pred cCCcccce-EEEEccc------EEEEEEEcCcccCCHHHHH--hcCHHHHHHHHHHHHHHHHHhc---C--ceEEEEecc
Confidence 57887765 3333333 1445554444444443322 2678889999999999886665 2 367789999
Q ss_pred CeeeCCCCcEEEecccccccccCCCceeeeccCCCCcccccccccCCCCcCcccchHHHHHHHHHHHhCCCCCcccccc
Q 037042 840 NVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALEYGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEIFNE 918 (1002)
Q Consensus 840 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~~~~ 918 (1002)
||+++.++.+++.-.|+-..+ +|. ..+...=.-.+=+++..+++++..|+....+
T Consensus 109 NL~f~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G 163 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDALVEG 163 (215)
T ss_dssp GEEECTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHS
T ss_pred eEEEcCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcC
Confidence 999999999999877754322 222 1122222345667888899999998775444
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=45.82 E-value=6.3 Score=27.85 Aligned_cols=17 Identities=12% Similarity=0.258 Sum_probs=6.9
Q ss_pred EeeeeccchhhHHHHHH
Q 037042 652 LLGIFLPLSTIFMIAVI 668 (1002)
Q Consensus 652 ~~~i~~~~~~~~~i~v~ 668 (1002)
..+++.+++.++++++.
T Consensus 13 A~gVVgGv~~v~ii~~~ 29 (44)
T 2l2t_A 13 AAGVIGGLFILVIVGLT 29 (44)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred EEeehHHHHHHHHHHHH
Confidence 33444434443343333
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=39.99 E-value=23 Score=35.11 Aligned_cols=83 Identities=10% Similarity=0.148 Sum_probs=58.1
Q ss_pred CCHHHHHHHHHHHHHHHH-HHHcCCCCCcEEccCCCCCeeeCCCCcEEEecccccccccCCCceeeeccCCCCccccccc
Q 037042 804 LDIFQRLNIMIDVASALE-YLYFGYSTPVIHCDLKPSNVLLGDNMVAHLSDFGITKLLTREDQFVTQTQTPATIGYMALE 882 (1002)
Q Consensus 804 l~~~~~~~i~~~ia~~l~-~LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE 882 (1002)
.+...+++++..|+.... +++ .-+|--+.|+||++|.++.++|.-.|+-.. ++|.
T Consensus 82 ~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~f~~~~~p~i~hRGi~~~-------------------lpP~ 137 (219)
T 4ano_A 82 TTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLMFNRALEPFFLHVGVKES-------------------LPPD 137 (219)
T ss_dssp SCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEEECTTCCEEESCCEETTT-------------------BSSC
T ss_pred cCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEEEeCCCcEEEEEcCCccc-------------------CCCC
Confidence 678889999999988776 544 346778999999999999999988775432 2332
Q ss_pred ccCCCCcCcccchHHHHHHHHHHHhCCCCCccc
Q 037042 883 YGSEGRVSTNGDVYNFGVMLMETFTGKKPTNEI 915 (1002)
Q Consensus 883 ~~~~~~~~~~~DvwSlGv~l~elltg~~P~~~~ 915 (1002)
-. +...=.-.+=+++..++.++..|+..
T Consensus 138 e~-----~ee~fl~qyKali~all~~K~~Fe~l 165 (219)
T 4ano_A 138 EW-----DDERLLREVKATVLALTEGEYRFDEY 165 (219)
T ss_dssp SC-----CHHHHHHHHHHHHHHHTTCSSCHHHH
T ss_pred CC-----CHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 21 11112335667778888888887654
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=35.86 E-value=59 Score=27.60 Aligned_cols=14 Identities=21% Similarity=0.076 Sum_probs=5.6
Q ss_pred ccccccccCceeec
Q 037042 489 STFWNLKDILYLNL 502 (1002)
Q Consensus 489 ~~~~~l~~L~~L~L 502 (1002)
.+|.++++|+.+.+
T Consensus 14 ~aF~~c~~L~~i~i 27 (100)
T 2lz0_A 14 SLFAGNTVIREITV 27 (100)
T ss_dssp CTTTTCTTCCCEEE
T ss_pred HHhcCCCCCcEEEc
Confidence 33444444444433
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=35.34 E-value=8.5 Score=27.14 Aligned_cols=7 Identities=0% Similarity=0.263 Sum_probs=2.7
Q ss_pred Eeeeecc
Q 037042 652 LLGIFLP 658 (1002)
Q Consensus 652 ~~~i~~~ 658 (1002)
+++.+++
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 3333444
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=28.27 E-value=66 Score=27.25 Aligned_cols=43 Identities=16% Similarity=0.167 Sum_probs=19.1
Q ss_pred CccCcccccCCccccEEEccCeeecccCCcccccccccceeccc
Q 037042 532 SGVIPNAIGGIKDLQFLFLEYNILQGSIPDSFGDLMSLKSLNLS 575 (1002)
Q Consensus 532 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 575 (1002)
+.+...+|.++.+|+.+.|-.+ ++.+-..+|.++.+|+.+.+.
T Consensus 9 t~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 9 VGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred CEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 3333444555555555544433 222334444444445444443
Done!