BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037049
(731 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359472780|ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
Length = 983
Score = 1021 bits (2640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/765 (67%), Positives = 605/765 (79%), Gaps = 42/765 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRICVKNLPKYV EDRLRD FSQKGEITDAKLMRTK+GKSRQFAFIGFRTEQEAEEA+K+
Sbjct: 119 SRICVKNLPKYVAEDRLRDHFSQKGEITDAKLMRTKEGKSRQFAFIGFRTEQEAEEALKF 178
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEK------NPVLAAKRGE 114
FN SYLDTCRI+CEIARKVGDP++PRPWSRYSLKKE + +E EK N +GE
Sbjct: 179 FNNSYLDTCRITCEIARKVGDPDIPRPWSRYSLKKEDKSTEVEKKDRGTKNSSHVGSKGE 238
Query: 115 KKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIK-GGE 173
K +K +ENDDPQL EFLQVMQPRVKSKMWANDTL D K S+ +Q+++ G +
Sbjct: 239 KS--KKGSENDDPQLQEFLQVMQPRVKSKMWANDTLGVPPLDHNGKNSDKQTQSMREGRD 296
Query: 174 KSITLHVKSDKSNV----ITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESED-- 227
+++ + D+S+ ++DSQ K N A DE++SDMDYFKSRVKK WSDSES+D
Sbjct: 297 EAVQMQADLDESDEREDELSDSQMDTKPNNLAHDEVISDMDYFKSRVKKKWSDSESDDVS 356
Query: 228 ----------------------DSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSI 265
DS + ++ + HN N+ + D
Sbjct: 357 ESGDDSESDDDSESGDDNDDNIDSFNKKSVESQDVQQVCQHGQHNTIKNDVAQEKVDDED 416
Query: 266 HSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNV 325
HS E+++GE +D GNP SSKD ++VLE+GRLFVRNLPYTATEDEL E FSKFGNV
Sbjct: 417 HS----EESDGERMDSGNPLLSSKD-GKDVLETGRLFVRNLPYTATEDELEELFSKFGNV 471
Query: 326 SEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQE 385
S+VH+VV+KDTKRSKGIAYVL+ +PESA RA+E LDNSIFQGRLLHVMPAR KK S+KQE
Sbjct: 472 SQVHLVVNKDTKRSKGIAYVLFTLPESAVRALEELDNSIFQGRLLHVMPAREKKPSEKQE 531
Query: 386 LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDR 445
+ S SQ +KTLKQ+REEE+KASEASG+T+AWNSLFMR DTVVENIARK+G+SKSDLLD
Sbjct: 532 ANASASQSSKTLKQKREEEKKASEASGDTRAWNSLFMRTDTVVENIARKYGISKSDLLDS 591
Query: 446 EANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYD 505
+A+DLAVRIALGETQVIAETKKAL NAGVN++SLEEF AGKT+G KRSNH+ LVKNLPY
Sbjct: 592 QADDLAVRIALGETQVIAETKKALINAGVNIASLEEFVAGKTEGAKRSNHILLVKNLPYG 651
Query: 506 SSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
SSEGELAKMFGK+GSLDK+ILP TKTLALVVFLEP EA AAF+GLAYKRYK PLYLEWA
Sbjct: 652 SSEGELAKMFGKYGSLDKIILPPTKTLALVVFLEPAEARAAFRGLAYKRYKDAPLYLEWA 711
Query: 566 PSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNF 625
P ++LSQ++ + + +VGE D KR LLEQQ+EG++D DIDPDRVESRSLFVKNLNF
Sbjct: 712 PGNILSQNAPYENDASRSVIVGERDVKRMLLEQQVEGISDVDIDPDRVESRSLFVKNLNF 771
Query: 626 KTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGT 685
KT E+LRKHF EH+KEG+I SV+VK+HLKNGKNVSMGFGFIEFDSVETA NVC +LQGT
Sbjct: 772 KTSGESLRKHFSEHMKEGKIRSVRVKEHLKNGKNVSMGFGFIEFDSVETAVNVCSNLQGT 831
Query: 686 ILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+LDGHALILQLC AKKDEQV+KK +KDKSSTKL+VRNVAFEA K
Sbjct: 832 VLDGHALILQLCRAKKDEQVLKKVDKDKSSTKLIVRNVAFEATEK 876
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRN+ + ATE +LR+ FS FG + + + + + R G A+V + + A A+
Sbjct: 861 STKLIVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHR--GFAFVEFVTKQEAQNAL 918
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+ L ++ GR H++ R K+ +EL T+
Sbjct: 919 QALSSTHLYGR--HLVMERAKEGESLEELRARTA 950
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+ TE LR FS G+I +L K G R FAF+ F T+QEA+ A++
Sbjct: 862 TKLIVRNVAFEATEKDLRQLFSPFGQIKSLRLP-MKFGSHRGFAFVEFVTKQEAQNALQA 920
Query: 61 FNKSYL 66
+ ++L
Sbjct: 921 LSSTHL 926
Score = 39.3 bits (90), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 608 IDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFI 667
+D D+ S L V+N+ F+ +++LR+ F G+I S+++ +K G + GF F+
Sbjct: 855 VDKDK-SSTKLIVRNVAFEATEKDLRQLFSPF---GQIKSLRLP--MKFGSH--RGFAFV 906
Query: 668 EFDSVETATNVCRDLQGTILDGHALILQ 695
EF + + A N + L T L G L+++
Sbjct: 907 EFVTKQEAQNALQALSSTHLYGRHLVME 934
>gi|297738037|emb|CBI27238.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/709 (67%), Positives = 557/709 (78%), Gaps = 60/709 (8%)
Query: 33 MRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
MRTK+GKSRQFAFIGFRTEQEAEEA+K+FN SYLDTCRI+CEIARKVGDP++PRPWSRYS
Sbjct: 1 MRTKEGKSRQFAFIGFRTEQEAEEALKFFNNSYLDTCRITCEIARKVGDPDIPRPWSRYS 60
Query: 93 LKKEKEVSEDEK------NPVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWA 146
LKKE + +E EK N +GEK +K +ENDDPQL EFLQVMQPRVKSKMWA
Sbjct: 61 LKKEDKSTEVEKKDRGTKNSSHVGSKGEKS--KKGSENDDPQLQEFLQVMQPRVKSKMWA 118
Query: 147 NDTLIGLMADQKAKVSENISQAIK-GGEKSITLHVKSDKSNV----ITDSQATEKSKNAA 201
NDTL D K S+ +Q+++ G ++++ + D+S+ ++DSQ K N A
Sbjct: 119 NDTLGVPPLDHNGKNSDKQTQSMREGRDEAVQMQADLDESDEREDELSDSQMDTKPNNLA 178
Query: 202 ADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSII 261
DE++SDMDYFKSR S DD+D
Sbjct: 179 HDEVISDMDYFKSR------------KSKVDDED-------------------------- 200
Query: 262 KDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSK 321
HS E+++GE +D GNP SSKD ++VLE+GRLFVRNLPYTATEDEL E FSK
Sbjct: 201 ----HS----EESDGERMDSGNPLLSSKD-GKDVLETGRLFVRNLPYTATEDELEELFSK 251
Query: 322 FGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS 381
FGNVS+VH+VV+KDTKRSKGIAYVL+ +PESA RA+E LDNSIFQGRLLHVMPAR KK S
Sbjct: 252 FGNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRALEELDNSIFQGRLLHVMPAREKKPS 311
Query: 382 DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSD 441
+KQE + S SQ +KTLKQ+REEE+KASEASG+T+AWNSLFMR DTVVENIARK+G+SKSD
Sbjct: 312 EKQEANASASQSSKTLKQKREEEKKASEASGDTRAWNSLFMRTDTVVENIARKYGISKSD 371
Query: 442 LLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKN 501
LLD +A+DLAVRIALGETQVIAETKKAL NAGVN++SLEEF AGKT+G KRSNH+ LVKN
Sbjct: 372 LLDSQADDLAVRIALGETQVIAETKKALINAGVNIASLEEFVAGKTEGAKRSNHILLVKN 431
Query: 502 LPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLY 561
LPY SSEGELAKMFGK+GSLDK+ILP TKTLALVVFLEP EA AAF+GLAYKRYK PLY
Sbjct: 432 LPYGSSEGELAKMFGKYGSLDKIILPPTKTLALVVFLEPAEARAAFRGLAYKRYKDAPLY 491
Query: 562 LEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVK 621
LEWAP ++LSQ++ + + +VGE D KR LLEQQ+EG++D DIDPDRVESRSLFVK
Sbjct: 492 LEWAPGNILSQNAPYENDASRSVIVGERDVKRMLLEQQVEGISDVDIDPDRVESRSLFVK 551
Query: 622 NLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRD 681
NLNFKT E+LRKHF EH+KEG+I SV+VK+HLKNGKNVSMGFGFIEFDSVETA NVC +
Sbjct: 552 NLNFKTSGESLRKHFSEHMKEGKIRSVRVKEHLKNGKNVSMGFGFIEFDSVETAVNVCSN 611
Query: 682 LQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
LQGT+LDGHALILQLC AKKDEQV+KK +KDKSSTKL+VRNVAFEA K
Sbjct: 612 LQGTVLDGHALILQLCRAKKDEQVLKKVDKDKSSTKLIVRNVAFEATEK 660
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRN+ + ATE +LR+ FS FG + + + + + R G A+V + + A A+
Sbjct: 645 STKLIVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHR--GFAFVEFVTKQEAQNAL 702
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+ L ++ GR H++ R K+ +EL T+
Sbjct: 703 QALSSTHLYGR--HLVMERAKEGESLEELRARTA 734
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+ TE LR FS G+I +L K G R FAF+ F T+QEA+ A++
Sbjct: 646 TKLIVRNVAFEATEKDLRQLFSPFGQIKSLRLP-MKFGSHRGFAFVEFVTKQEAQNALQA 704
Query: 61 FNKSYLDTCRISCEIAR 77
+ ++L + E A+
Sbjct: 705 LSSTHLYGRHLVMERAK 721
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIKY 60
R+ V+NLP TED L + FS+ G ++ L+ KD K S+ A++ F + A A++
Sbjct: 230 RLFVRNLPYTATEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRALEE 289
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKK 116
+ S + MP + S K+E S + + L KR E+K
Sbjct: 290 LDNSIFQGRLLHV----------MPAREKKPSEKQEANASASQSSKTLKQKREEEK 335
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 608 IDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFI 667
+D D+ S L V+N+ F+ +++LR+ F G+I S+++ +K G + GF F+
Sbjct: 639 VDKDK-SSTKLIVRNVAFEATEKDLRQLFSPF---GQIKSLRLP--MKFGSH--RGFAFV 690
Query: 668 EFDSVETATNVCRDLQGTILDGHALILQ 695
EF + + A N + L T L G L+++
Sbjct: 691 EFVTKQEAQNALQALSSTHLYGRHLVME 718
>gi|224072369|ref|XP_002303703.1| predicted protein [Populus trichocarpa]
gi|222841135|gb|EEE78682.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/705 (68%), Positives = 574/705 (81%), Gaps = 24/705 (3%)
Query: 37 DGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKE 96
DGKSRQFAF+GFRTE+EAE+AIKYFNKSYLDTCRI CEIARKVGDP++PRPWSRYS +KE
Sbjct: 1 DGKSRQFAFVGFRTEREAEDAIKYFNKSYLDTCRIVCEIARKVGDPDIPRPWSRYSKQKE 60
Query: 97 KEVSEDEKNPVLAAKRGEKKTIEKV----------TENDDPQLLEFLQVMQPRVKSKMWA 146
+++SEDE N V +K + K + E DDP+L EFLQVMQPR KSK+W
Sbjct: 61 EKLSEDENN-VTGSKSLDVKGAKDEKKKNKDNEKGNEIDDPRLQEFLQVMQPRAKSKLWE 119
Query: 147 NDTLIGLMADQKAKVSENISQAIK-GGEKSITLHVKSDKSNVITDSQATEKSKNAAADEL 205
ND+++ AD +V + SQ K G EK + + V+ DK N TD E+S + A DE
Sbjct: 120 NDSIVSHTADINGEVGKKGSQGKKEGKEKLVPVEVEIDKGNSDTD----EESNDPARDEA 175
Query: 206 MSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSI 265
+SDMDYF+SRVKK+ SDSESE + DDDDDD + +++ D S+ +S+ + ++
Sbjct: 176 VSDMDYFRSRVKKELSDSESESGGSDDDDDDDKNDNCNDKDED----SDLSNESLQRGNV 231
Query: 266 HSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNV 325
ED + E D NPSS+ KD ++E+LE+ RLFVRNLPYTA EDEL EHFSKFGN+
Sbjct: 232 AQAEVAEDTHAE--DHENPSSTLKDEKEEILETCRLFVRNLPYTAIEDELEEHFSKFGNI 289
Query: 326 SEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQE 385
S+VH+VVDKDTKRSKG+AY+ Y +PESA+RA+E LDNSIFQGRLLHVMPA+ K S+KQ+
Sbjct: 290 SQVHLVVDKDTKRSKGLAYIHYTLPESAARALEELDNSIFQGRLLHVMPAKQKILSNKQD 349
Query: 386 LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDR 445
+ SQG+ TLKQRR+EE+KA+EASG+T+AWNS F DTV+ENIAR+HGVSKSDLLDR
Sbjct: 350 --DLLSQGSNTLKQRRQEEKKAAEASGDTRAWNSFFFHHDTVIENIARRHGVSKSDLLDR 407
Query: 446 EANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYD 505
EA+DLAVR+ALGETQVIAETKKALTNAGVN+++LEE +AGK DG+KRSNHV LVKNLPY
Sbjct: 408 EADDLAVRVALGETQVIAETKKALTNAGVNITALEEIAAGKKDGMKRSNHVLLVKNLPYG 467
Query: 506 SSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
SSE ELA+ FGKFGSLDK+ILP TKTLALVVFLEP EA AAFKGLAYK+YKGVPLYLEWA
Sbjct: 468 SSEVELAEKFGKFGSLDKIILPPTKTLALVVFLEPSEARAAFKGLAYKQYKGVPLYLEWA 527
Query: 566 PSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNF 625
P+++LSQSSTSK ++K+DA VGEHDAKR +LEQ +EG+++ DIDPDR+ESRSLFVKNLNF
Sbjct: 528 PANILSQSSTSKSDEKSDAAVGEHDAKRVILEQSVEGISEMDIDPDRIESRSLFVKNLNF 587
Query: 626 KTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGT 685
KT DE+L+KHF EH+KEGRI SV++KKH+K GKNVSMGFGFIEFDSVETATN+CRDLQGT
Sbjct: 588 KTADESLKKHFSEHMKEGRIQSVRIKKHMKKGKNVSMGFGFIEFDSVETATNICRDLQGT 647
Query: 686 ILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+LDGHALILQLCHAKKDE VKKA KDKSSTKLLVRNVAFEA K
Sbjct: 648 VLDGHALILQLCHAKKDEHSVKKAGKDKSSTKLLVRNVAFEATEK 692
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRN+ + ATE +LR+ F FG + + + + R G A+V Y + A A+
Sbjct: 677 STKLLVRNVAFEATEKDLRQLFGPFGQIKSLRLPMKFGNHR--GFAFVEYVTKQEAQNAL 734
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+ L ++ GR H++ R K+ +EL T+
Sbjct: 735 QALSSTHLYGR--HLVLERAKEGESLEELRARTA 766
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S L V+N+ F+ +++LR+ FG G+I S+++ N + GF F+E+ + +
Sbjct: 677 STKLLVRNVAFEATEKDLRQLFGPF---GQIKSLRLPMKFGNHR----GFAFVEYVTKQE 729
Query: 675 ATNVCRDLQGTILDGHALILQ 695
A N + L T L G L+L+
Sbjct: 730 AQNALQALSSTHLYGRHLVLE 750
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+ TE LR F G+I +L K G R FAF+ + T+QEA+ A++
Sbjct: 678 TKLLVRNVAFEATEKDLRQLFGPFGQIKSLRLP-MKFGNHRGFAFVEYVTKQEAQNALQA 736
Query: 61 FNKSYLDTCRISCEIAR 77
+ ++L + E A+
Sbjct: 737 LSSTHLYGRHLVLERAK 753
>gi|356554642|ref|XP_003545653.1| PREDICTED: probable RNA-binding protein 19-like [Glycine max]
Length = 824
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/742 (64%), Positives = 560/742 (75%), Gaps = 59/742 (7%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEI-TDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRICVKNLPK V ED LR+FFS KG I TD KLMRTKDGKSRQFAFIG+RTE EA+EAI+
Sbjct: 18 SRICVKNLPKDVGEDELREFFSGKGGIITDVKLMRTKDGKSRQFAFIGYRTEDEAQEAIR 77
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVS-EDEKNPVLAAKRGEKKTI 118
YFNK++L T RI CE+ARK GD N+PRPWSR+S K++ +V+ D + P A +GE
Sbjct: 78 YFNKNFLRTSRIICEVARKHGDANLPRPWSRHSKKEDDKVTAPDLEKPSRAKGQGENSKG 137
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWANDT-LIGLMADQKAKVSENISQAIKGGEKSIT 177
+ DDPQL +FLQVMQPRVKSKMWANDT ++ + +++A +++ A ++S +
Sbjct: 138 GVGDDVDDPQLQDFLQVMQPRVKSKMWANDTSIVTNVGNKQAMPNKDNDGASVASDQSGS 197
Query: 178 LHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGD----- 232
+ + DS+ KS DE++SDMDYFKSRV K+WSDSES DD D
Sbjct: 198 F-----EDGFLEDSEPN-KSHEPERDEVISDMDYFKSRVTKEWSDSESSDDEDDDDDNDS 251
Query: 233 ---DDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDAN-GEIVDPGNPSSSS 288
D+D DD HS GE+D N G++ S S
Sbjct: 252 SCIDNDRDD---------------------------HSDAGEDDENWGQL-------SKS 277
Query: 289 KDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYA 348
+D + V +S RLFVRNLPY TE+EL EHFS+FG+VS+VH+VVDKDTKRSKGIAY+LY
Sbjct: 278 ED-NKGVFDSCRLFVRNLPYMTTEEELEEHFSRFGSVSQVHLVVDKDTKRSKGIAYILYT 336
Query: 349 IPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKAS 408
P+ A+RA E LDNSIFQGRLLHVM A ++ SD QE Q +KTLKQ+REE+RKA
Sbjct: 337 APDIAARAQEELDNSIFQGRLLHVMQAL-QRHSDNQEY----DQRSKTLKQQREEKRKAD 391
Query: 409 EASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKA 468
EASG+T+AWNSLFMRPDTVVENIARK+GV+K DLLDREA+DLAVRIALGETQVI+ETKKA
Sbjct: 392 EASGDTRAWNSLFMRPDTVVENIARKYGVNKGDLLDREADDLAVRIALGETQVISETKKA 451
Query: 469 LTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS 528
NAGVNV +LEE + KTDGLKRSNHV LVKNLPY S+E ELAKMFGKFGSLDK+ILP
Sbjct: 452 FKNAGVNVEALEELANNKTDGLKRSNHVLLVKNLPYGSTENELAKMFGKFGSLDKIILPP 511
Query: 529 TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGE 588
TKTLALVVFLEP EA AAF+GLAYKRYK PLYLEWAPS++LSQ STSK N N +V+GE
Sbjct: 512 TKTLALVVFLEPAEARAAFRGLAYKRYKDAPLYLEWAPSNILSQCSTSKNNAMN-SVIGE 570
Query: 589 HDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSV 648
+DAKR +LEQQ+E +TD DIDPDRV++RSLFVKNLNFKT DE+LRKHF EH+KEGRILSV
Sbjct: 571 NDAKRQMLEQQVERITDVDIDPDRVQARSLFVKNLNFKTIDESLRKHFSEHMKEGRILSV 630
Query: 649 KVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKK 708
KV KHLKNGKNVSMGFGF+EFDS ETATNVCRDLQGT+LD HALILQ CH K D Q KK
Sbjct: 631 KVLKHLKNGKNVSMGFGFVEFDSPETATNVCRDLQGTVLDSHALILQPCHVKNDGQKQKK 690
Query: 709 AEKDKSSTKLLVRNVAFEAQRK 730
+KD+SSTKL ++NVAFEA K
Sbjct: 691 IDKDRSSTKLHIKNVAFEATEK 712
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L ++N+ + ATE +LR FS FG + + + + + R G A+V Y + A A
Sbjct: 697 STKLHIKNVAFEATEKDLRRLFSPFGQIKSLRLPMKFGSHR--GFAFVEYVTQQEAKNAR 754
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
E L ++ GR H++ K+ +EL T+
Sbjct: 755 EALASTHLYGR--HLLIEHAKEDETLEELRAKTA 786
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 10/98 (10%)
Query: 608 IDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFI 667
ID DR S L +KN+ F+ +++LR+ F G+I S+++ +K G + GF F+
Sbjct: 691 IDKDR-SSTKLHIKNVAFEATEKDLRRLFSPF---GQIKSLRLP--MKFGSH--RGFAFV 742
Query: 668 EFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQV 705
E+ + + A N L T L G L+++ HAK+DE +
Sbjct: 743 EYVTQQEAKNAREALASTHLYGRHLLIE--HAKEDETL 778
>gi|449464088|ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Cucumis sativus]
Length = 823
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/738 (61%), Positives = 559/738 (75%), Gaps = 34/738 (4%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRICVKNLPKY+ ++RLR FS+KGEITD KLMRTKDGKSRQFAFIGFRTE EA+EAI+Y
Sbjct: 6 SRICVKNLPKYIDDNRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRY 65
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKE-----KEVSEDEKNPVLAAKRGEK 115
FNKS+++T RI+CE A KVGDP +PRPWS++S K+ EV ED+KN + E
Sbjct: 66 FNKSFINTHRIACESAWKVGDPKIPRPWSKHSKAKKGSKDGMEV-EDDKNSNFLGSKEEG 124
Query: 116 KTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
++ ++DDP++ EFLQV QPR+ SK+WAND L+ ADQ K E SQ K K
Sbjct: 125 DDLKLSIQDDDPKIQEFLQVTQPRINSKLWANDILVASDADQNRKGKEKPSQMKKMDRKR 184
Query: 176 ITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDD 235
L V TD A E+ + + K+R K+WSDSES D+ ++D
Sbjct: 185 SEL--------VNTDEDE--------AQEMQTSL--HKNRGMKNWSDSESSDNDNINEDA 226
Query: 236 DDDGE---EEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQ 292
++GE ++ E++N +S + ++ HS ++ A+ ++ SS+ +D +
Sbjct: 227 KNEGESIKKKLEKKNVQMVNSKSPLEIKAREEDHSDHCDDVADVHHMEKS--SSTLEDKK 284
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
E+LESGRLFVRNLPY TE+EL EHF K+G VSEVH+VVDKDT+RSKG+AY+ Y +PES
Sbjct: 285 DEMLESGRLFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIHYTLPES 344
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG 412
A RA+E LDNSIFQGRLLHVMPA KK+ +K E +K+ +++REEERK SEASG
Sbjct: 345 AKRALEELDNSIFQGRLLHVMPAELKKTLEKPE---XVPLLSKSFQKKREEERKTSEASG 401
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNA 472
NT+AWNSLFMRPDTVVENIARK+GVSK +LLDREA+DLAVR+ALGETQV+AETKKALTNA
Sbjct: 402 NTRAWNSLFMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKALTNA 461
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL 532
GVNV+SLEEF++GK DG KRSNH+ LVKNLPY SS+GELA MFGKFGS+DK+ILPSTK L
Sbjct: 462 GVNVASLEEFASGKADGHKRSNHILLVKNLPYGSSQGELANMFGKFGSVDKIILPSTKIL 521
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
ALV+FLEP A AAFKGLAYKRYK PLYLEWAP ++LSQ + GN + D VGE D +
Sbjct: 522 ALVIFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQKPMA-GNVE-DEKVGEGDTR 579
Query: 593 RALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK 652
R +LEQ +EG+ D D+DPDRVESRSLFVKNLNFKT DE+LR HF EH+KEG+ILS KVKK
Sbjct: 580 RVMLEQAVEGIPDVDLDPDRVESRSLFVKNLNFKTTDESLRNHFSEHMKEGKILSAKVKK 639
Query: 653 HLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKD 712
H+K G++VSMGFGF+EFDSVET+T+VC +LQGT+LDGHALILQ+C+ KKD+Q +K +K+
Sbjct: 640 HVKKGQHVSMGFGFLEFDSVETSTSVCSNLQGTVLDGHALILQMCNVKKDDQGKRKVDKE 699
Query: 713 KSSTKLLVRNVAFEAQRK 730
+SSTKLLVRNVAFEA K
Sbjct: 700 QSSTKLLVRNVAFEATGK 717
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRN+ + AT +LR+ FS +G + + + + + +G A+V + + A A
Sbjct: 702 STKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPM--KFGKHRGFAFVEFVTKQEAQNAF 759
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+ L N+ GR H++ R K+ +EL T+
Sbjct: 760 QALSNTHLYGR--HLVLERAKEGESLEELRARTA 791
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+ T LR FS G+I +L K GK R FAF+ F T+QEA+ A +
Sbjct: 703 TKLLVRNVAFEATGKDLRQLFSPYGQIKSLRL-PMKFGKHRGFAFVEFVTKQEAQNAFQA 761
Query: 61 FNKSYLDTCRISCEIAR 77
+ ++L + E A+
Sbjct: 762 LSNTHLYGRHLVLERAK 778
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S L V+N+ F+ ++LR+ F + G+I S+++ +K GK+ GF F+EF + +
Sbjct: 702 STKLLVRNVAFEATGKDLRQLFSPY---GQIKSLRLP--MKFGKH--RGFAFVEFVTKQE 754
Query: 675 ATNVCRDLQGTILDGHALILQ 695
A N + L T L G L+L+
Sbjct: 755 AQNAFQALSNTHLYGRHLVLE 775
>gi|449505035|ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Cucumis sativus]
Length = 826
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/738 (60%), Positives = 557/738 (75%), Gaps = 31/738 (4%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRICVKNLPKY+ ++RLR FS+KGEITD KLMRTKDGKSRQFAFIGFRTE EA+EAI+Y
Sbjct: 6 SRICVKNLPKYIDDNRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRY 65
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKE-----KEVSEDEKNPVLAAKRGEK 115
FNKS+++T RI+CE A KVGDP +PRPWS++S K+ EV ED+KN + E
Sbjct: 66 FNKSFINTHRIACESAWKVGDPKIPRPWSKHSKAKKGSKDGMEV-EDDKNSNFLGSKEEG 124
Query: 116 KTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
++ ++DDP++ EFLQV QPR+ SK+WAND L+ ADQ K E SQ K K
Sbjct: 125 DDLKLSIQDDDPKIQEFLQVTQPRINSKLWANDILVASDADQNRKGKEKPSQMKKMDRKR 184
Query: 176 ITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDD 235
L V TD A E+ + + K+R K+WSDSES D+ ++D
Sbjct: 185 SEL--------VNTDEDE--------AQEMQTSL--HKNRGMKNWSDSESSDNDNINEDA 226
Query: 236 DDDGE---EEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQ 292
++GE ++ E++N +S + ++ HS ++ A+ ++ SS+ +D +
Sbjct: 227 KNEGESIKKKLEKKNVQMVNSKSPLEIKAREEDHSDHCDDVADVHHMEKS--SSTLEDKK 284
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
E+LESGRLFVRNLPY TE+EL EHF K+G VSEVH+VVDKDT+RSKG+AY+ Y +PES
Sbjct: 285 DEMLESGRLFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIHYTLPES 344
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG 412
A RA+E LDNSIFQGRLLHVMPA K + + + +K+ +++REEERK SEASG
Sbjct: 345 AKRALEELDNSIFQGRLLHVMPAELKNTRETGVSSIAVCSLSKSFQKKREEERKTSEASG 404
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNA 472
NT+AWNSLFMRPDTVVENIARK+GVSK +LLDREA+DLAVR+ALGETQV+AETKKALTNA
Sbjct: 405 NTRAWNSLFMRPDTVVENIARKYGVSKGELLDREADDLAVRVALGETQVVAETKKALTNA 464
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL 532
GVNV+SLEEF++GK DG KRSNH+ LVKNLPY SS+GELA MFGKFGS+DK+ILPSTK L
Sbjct: 465 GVNVASLEEFASGKADGHKRSNHILLVKNLPYGSSQGELANMFGKFGSVDKIILPSTKIL 524
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
ALV+FLEP A AAFKGLAYKRYK PLYLEWAP ++LSQ + GN + D VGE D +
Sbjct: 525 ALVIFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSQKPMA-GNVE-DEKVGEGDTR 582
Query: 593 RALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK 652
R +LEQ +EG+ D D+DPDRVESRSLFVKNLNFKT DE+LR HF EH+KEG+ILS KVKK
Sbjct: 583 RVMLEQAVEGIPDVDLDPDRVESRSLFVKNLNFKTTDESLRNHFSEHMKEGKILSAKVKK 642
Query: 653 HLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKD 712
H+K G++VSMGFGF+EFDSVET+T+VC +LQGT+LDGHALILQ+C+ KKD+Q +K +K+
Sbjct: 643 HVKKGQHVSMGFGFLEFDSVETSTSVCSNLQGTVLDGHALILQMCNVKKDDQGKRKVDKE 702
Query: 713 KSSTKLLVRNVAFEAQRK 730
+SSTKLLVRNVAFEA K
Sbjct: 703 QSSTKLLVRNVAFEATGK 720
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRN+ + AT +LR+ FS +G + + + + + +G A+V + + A A
Sbjct: 705 STKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPM--KFGKHRGFAFVEFVTKQEAQNAF 762
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+ L N+ GR H++ R K+ +EL T+
Sbjct: 763 QALSNTHLYGR--HLVLERAKEGESLEELRARTA 794
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+ T LR FS G+I +L K GK R FAF+ F T+QEA+ A +
Sbjct: 706 TKLLVRNVAFEATGKDLRQLFSPYGQIKSLRL-PMKFGKHRGFAFVEFVTKQEAQNAFQA 764
Query: 61 FNKSYLDTCRISCEIAR 77
+ ++L + E A+
Sbjct: 765 LSNTHLYGRHLVLERAK 781
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S L V+N+ F+ ++LR+ F + G+I S+++ +K GK+ GF F+EF + +
Sbjct: 705 STKLLVRNVAFEATGKDLRQLFSPY---GQIKSLRLP--MKFGKH--RGFAFVEFVTKQE 757
Query: 675 ATNVCRDLQGTILDGHALILQ 695
A N + L T L G L+L+
Sbjct: 758 AQNAFQALSNTHLYGRHLVLE 778
>gi|356551226|ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Glycine max]
Length = 847
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/752 (63%), Positives = 570/752 (75%), Gaps = 40/752 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEI-TDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRICVKNLPK V ED LR+FFS KG I TDAKLMRTKDGKSRQFAFIG+RTE EA+EAI+
Sbjct: 2 SRICVKNLPKDVAEDELREFFSGKGGIITDAKLMRTKDGKSRQFAFIGYRTEDEAQEAIR 61
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVS-EDEKNPVLAAK-RGEKKT 117
YFNK++L T RI CE+ARK GD N+PRPWSR+S KK+ +V+ D + P A K +GE
Sbjct: 62 YFNKNFLRTSRIICEVARKHGDENLPRPWSRHSKKKDDKVTAPDVEKPARANKGQGENSK 121
Query: 118 IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMAD-QKAKVSENISQAIKGGEKSI 176
+ DDPQL +FLQVMQPRVKSKMWANDT I D ++A +++ A ++S
Sbjct: 122 GSVGDDVDDPQLQDFLQVMQPRVKSKMWANDTSIATNVDNRQAMPNKDNDGASVASDQSG 181
Query: 177 TLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDD 236
+L + + DS+ KS D+++SDMDYFKSRV +WSDSES D DDD+D
Sbjct: 182 SL-----EDGFLEDSEPKNKSHEPERDKVISDMDYFKSRVTTEWSDSESSDGEDDDDDND 236
Query: 237 DDGEEEEEEENDHNGDSNEECDSIIKDSIHSGV--------GEEDANGE----------I 278
+ + +++ + G + CDS +G G+ED +GE +
Sbjct: 237 SSCIDSDRDDHSNAGKDEDNCDS------RNGAREVDVDLEGKEDTSGENVTNGKTQVNV 290
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
+ G S S+D ++ V +S RLFVRNLPYT TE+EL EHFS+FG+VS+VH+VV+KDTKR
Sbjct: 291 TEQGGQLSKSED-EKGVFDSCRLFVRNLPYTTTEEELEEHFSRFGSVSQVHLVVNKDTKR 349
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLK 398
SKGIAY+LY P A+RA E LDNSIFQGRLLHVMPA ++ SD QE Q +KTLK
Sbjct: 350 SKGIAYILYTAPNIAARAQEELDNSIFQGRLLHVMPAL-QRHSDNQE----XDQSSKTLK 404
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGE 458
Q+R+E+R+A EASG+T+AWNSLFMR DTVVENIARK GVSKSDLLDREA+DLAVRIALGE
Sbjct: 405 QQRQEKRQADEASGDTRAWNSLFMRSDTVVENIARKFGVSKSDLLDREADDLAVRIALGE 464
Query: 459 TQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKF 518
TQVI+ETKKA NAGVNV +LEE + KTD LKRSNHV LVKNLPY S+E ELAKMFGKF
Sbjct: 465 TQVISETKKAFKNAGVNVEALEELANNKTDELKRSNHVLLVKNLPYGSTENELAKMFGKF 524
Query: 519 GSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKG 578
GSLDK+ILP TKTLALVVFLEPVEA AAF+GLAYKR+K PLYLEWAPS++LSQSSTSK
Sbjct: 525 GSLDKIILPPTKTLALVVFLEPVEARAAFRGLAYKRFKDAPLYLEWAPSNILSQSSTSKN 584
Query: 579 NQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE 638
N+ N A +GE++AKR +LEQQ+E +TD DID DRV++RSLFVKNLNFKT DE+LRKH E
Sbjct: 585 NEINGA-IGENEAKRQILEQQVERITDVDIDSDRVQARSLFVKNLNFKTIDESLRKHLTE 643
Query: 639 HIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
H+KEG ILSVKV KHLKNGKNVSMGFGF+EFDS ETATNVC+DLQGT+LD HALILQ C+
Sbjct: 644 HMKEGSILSVKVLKHLKNGKNVSMGFGFVEFDSPETATNVCKDLQGTVLDSHALILQPCN 703
Query: 699 AKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
K D Q K EKD+SSTKLL++NVAFEA K
Sbjct: 704 VKNDGQKQKTLEKDRSSTKLLIKNVAFEATEK 735
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 252 DSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLE----SGRLFVRNLP 307
DS E ++ KD + + D++ I+ P N + + +Q+ LE S +L ++N+
Sbjct: 675 DSPETATNVCKDLQGTVL---DSHALILQPCNVKNDGQ--KQKTLEKDRSSTKLLIKNVA 729
Query: 308 YTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQG 367
+ ATE +LR FS FG + + + + R G A+V Y + A A++ L ++ G
Sbjct: 730 FEATEKDLRRLFSPFGQIKSLRLPMKFGNHR--GFAFVEYVTQQEAQNALKALSSTHLYG 787
Query: 368 RLLHVMPARHKKSSDKQELHNSTS 391
R H++ R K++ +EL T+
Sbjct: 788 R--HLVIERAKEAESLEELRARTA 809
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ +KN+ TE LR FS G+I +L K G R FAF+ + T+QEA+ A+K
Sbjct: 721 TKLLIKNVAFEATEKDLRRLFSPFGQIKSLRLP-MKFGNHRGFAFVEYVTQQEAQNALKA 779
Query: 61 FNKSYL 66
+ ++L
Sbjct: 780 LSSTHL 785
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 601 EGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNV 660
+G ++ DR S L +KN+ F+ +++LR+ F G+I S+++ N +
Sbjct: 707 DGQKQKTLEKDR-SSTKLLIKNVAFEATEKDLRRLFSPF---GQIKSLRLPMKFGNHR-- 760
Query: 661 SMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
GF F+E+ + + A N + L T L G L+++
Sbjct: 761 --GFAFVEYVTQQEAQNALKALSSTHLYGRHLVIE 793
>gi|186512055|ref|NP_193696.3| nucleotide/nucleic acid binding protein [Arabidopsis thaliana]
gi|332658804|gb|AEE84204.1| nucleotide/nucleic acid binding protein [Arabidopsis thaliana]
Length = 816
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/737 (56%), Positives = 535/737 (72%), Gaps = 29/737 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRICVKNLPK+V ED+LRD FSQKGEITDAKLMR+ DGKSRQF FIGFR+ QEA++AIKY
Sbjct: 2 SRICVKNLPKHVKEDQLRDHFSQKGEITDAKLMRSNDGKSRQFGFIGFRSAQEAQQAIKY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEV--SEDEKNPVLAAKRGEKKTI 118
FN +YL T I EIA KVGD N PRPWSR S KKE+E S E AK G+K+
Sbjct: 62 FNNTYLGTSLIIVEIAHKVGDENAPRPWSRLSHKKEEEAKKSSSEGLKDGNAKGGKKRK- 120
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITL 178
E DDP+ EFL+V Q R KSK+W+ND I ++ K + +A E+ ++
Sbjct: 121 ---AEVDDPEFQEFLEVHQ-RSKSKIWSNDMSIPPAPEETGKEKVLVKKA---DEQIVSN 173
Query: 179 HVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESED---DSAGDDDD 235
V+ K+ +D++ T+KSK AA + +SDM+YFKSR+KK+ SDSES++ DS+ D+
Sbjct: 174 GVEPKKAKKSSDTEKTKKSKVVAASDDVSDMEYFKSRIKKNLSDSESDNESEDSSEDEAG 233
Query: 236 DDDGEEEEEEENDHNGDSNEECDSIIKD--SIHSGVGEEDANGEIVDPGNPSSSSKDVQQ 293
DDDG+ E + + D++ I D + G ++ E+ G + SK V
Sbjct: 234 DDDGKAETDGQ-----DADIRYFPIDGDVEAGGVGKDDDGDAMEVEGDGKVAQESKAVSD 288
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
+VL++GRLFVRNLPYTATE+EL EHFS FG +SEVH+V+DK+TKRS+GIAY+LY IPE A
Sbjct: 289 DVLDTGRLFVRNLPYTATEEELMEHFSTFGKISEVHLVLDKETKRSRGIAYILYLIPECA 348
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
+RA+E LDNS FQGRLLH++PA+H+++SDKQ N TS KT KQ+REE+RKASEA G+
Sbjct: 349 ARAMEELDNSSFQGRLLHILPAKHRETSDKQV--NDTSNLPKTFKQKREEQRKASEAGGD 406
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAG 473
TKAWNSLFMRPDT++ENI R +GVSKS+LLDREA D AVR+ALGET+VIAETK+AL AG
Sbjct: 407 TKAWNSLFMRPDTILENIVRVYGVSKSELLDREAEDPAVRLALGETKVIAETKEALAKAG 466
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
VNV+SLE+F+ D RS H+ LVKNLP+ S+E ELA+MFGKFGSLDK+ILP TKT+A
Sbjct: 467 VNVTSLEKFATRNGDEKNRSKHILLVKNLPFASTEKELAQMFGKFGSLDKIILPPTKTMA 526
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKR 593
L VFLEP EA AA KG+AYKRYK PLYLEWAP ++L + N++ + + E+ +R
Sbjct: 527 LAVFLEPAEARAALKGMAYKRYKDAPLYLEWAPGNILEPKNLPDTNEER-SDIEENGVRR 585
Query: 594 ALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKH 653
LEQQ+E IDPD ES L VKNL+FKT DE L+KHF + +K+G+ILSV + KH
Sbjct: 586 VNLEQQVE------IDPDVTESNVLNVKNLSFKTTDEGLKKHFTKLVKQGKILSVTIIKH 639
Query: 654 LKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDK 713
KN K +S G+GF+EFDSVETAT+V RDLQGT+LDGHALIL+ C K+ ++V K + KDK
Sbjct: 640 KKNEKYLSSGYGFVEFDSVETATSVYRDLQGTVLDGHALILRFCENKRSDKVGKDSNKDK 699
Query: 714 SSTKLLVRNVAFEAQRK 730
TKL V+N+AFEA ++
Sbjct: 700 PCTKLHVKNIAFEATKR 716
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 499 VKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-----LALVVFLEPVEAAAAFKGLAYK 553
VKN+ +++++ EL ++F FG + + LP A V F+ EA A K LA
Sbjct: 706 VKNIAFEATKRELRQLFSPFGQIKSMRLPKKNIGQYAGYAFVEFVTKQEALNAKKALAST 765
Query: 554 RYKGVPLYLEWAPSD----VLSQSSTSKGNQKND 583
+ G L LEWA D + + S +K +++ND
Sbjct: 766 HFYGRHLVLEWANDDNSMEAIRKRSAAKFDEEND 799
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L V+N+ + AT+ ELR+ FS FG + + + K+ + G A+V + + A A +
Sbjct: 703 KLHVKNIAFEATKRELRQLFSPFGQIKSMRL-PKKNIGQYAGYAFVEFVTKQEALNAKKA 761
Query: 360 LDNSIFQGRLL--------HVMPARHKKSSDKQELHNSTSQGTKTLK 398
L ++ F GR L + M A K+S+ K + N ++ K+ K
Sbjct: 762 LASTHFYGRHLVLEWANDDNSMEAIRKRSAAKFDEENDNARKRKSSK 808
>gi|226504376|ref|NP_001146285.1| uncharacterized protein LOC100279860 [Zea mays]
gi|219886507|gb|ACL53628.1| unknown [Zea mays]
gi|413919482|gb|AFW59414.1| hypothetical protein ZEAMMB73_904714 [Zea mays]
Length = 881
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/787 (52%), Positives = 534/787 (67%), Gaps = 74/787 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+CVKNLPK E RLRD FS+KGE+TDAK++RTKDGKSRQFAFIG+RT +EA+EA+KY
Sbjct: 3 SRLCVKNLPKGADERRLRDVFSRKGEVTDAKVIRTKDGKSRQFAFIGYRTNEEADEALKY 62
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNP--VLAAKRGEKK-- 116
FN +Y+DTC+I+CE+ARK+GDP+ PRPWSR+SLKK + S+D+ N V A +G
Sbjct: 63 FNNTYIDTCKITCEVARKIGDPDAPRPWSRHSLKKSEYGSKDKNNAGAVDAPPKGSNAQG 122
Query: 117 -----TIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKG 171
+ K + +DP+ LEFL+ MQPR K+KMWANDT L D AK S ++ KG
Sbjct: 123 TSAHASGSKGSVANDPKFLEFLEAMQPRSKAKMWANDTAATL--DTAAKDSVVAAKESKG 180
Query: 172 GEKSITLHVKSDKS----------NVITDSQATEKSKNA-AADELMSDMDYFKSRVKKDW 220
K++ L ++D S N ++ A+E+ K D+ M+D D+FKS+VKK+W
Sbjct: 181 PLKNV-LTSENDSSSEDTSDEKVANDLSSENASEQLKTENKQDKNMTDADFFKSKVKKNW 239
Query: 221 SDSESED----------------------------DSAGDDD-----DDDDGEEEE--EE 245
SDSES+D D+ GD D D D E +E
Sbjct: 240 SDSESDDEGSAHQSNTTTDDEDSSDESQDSDNQLADTKGDPDKRNIVDKDTLVENTDLQE 299
Query: 246 ENDHNGDSNEECDSIIKDS-IHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVR 304
D + +E+ D + + IH D NG + D ++ LE+GRL++
Sbjct: 300 PEDLDNKESEDLDGRPRGTEIHEDQERADENGAPI---------TDEKKLALETGRLYIC 350
Query: 305 NLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSI 364
NLPY +ED+L E ++G+V + HIVV+K TK S G YVL+++P+SA RA++ LDNS
Sbjct: 351 NLPYATSEDDLVELCRQYGDVEQAHIVVNKATKISTGRGYVLFSLPDSAVRALDELDNSS 410
Query: 365 FQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRP 424
FQGR+L V A K +K E + T+ +LKQ+R E++KASE SG+T+AWNS +MR
Sbjct: 411 FQGRVLRVKAA---KPLNKLESFHETAVEKVSLKQKRLEQKKASEISGDTRAWNSFYMRQ 467
Query: 425 DTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSA 484
DTVVENIARK+G+SKS+LLDREA+DLAVRIALGET VIAETKK L+ +GVNV++LEE ++
Sbjct: 468 DTVVENIARKNGISKSELLDREADDLAVRIALGETHVIAETKKFLSRSGVNVAALEEHAS 527
Query: 485 GKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAA 544
+ + KRSN+V LVKNLP++S+E ELA +F K GSLDK+ILP T+ ALVVF+E EA
Sbjct: 528 KRNEKFKRSNYVILVKNLPFNSTEEELATLFQKHGSLDKIILPPTRVFALVVFVEATEAQ 587
Query: 545 AAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQ-KNDAVVGEHDAKRALLEQQLEGV 603
AFK L Y RYK PLYLEWAP ++LS +S + KN+ VGE +A ++Q +EGV
Sbjct: 588 YAFKKLLYTRYKDTPLYLEWAPENILSPTSAPVDEEVKNE--VGERILTKANIDQTVEGV 645
Query: 604 TDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMG 663
+ +IDPDRVESRS+FVKNLNFKT DE+L++HF +K G + S VKKH+K GKNVSMG
Sbjct: 646 SAEEIDPDRVESRSVFVKNLNFKTTDESLKQHFSTKLKSGSLKSATVKKHVKKGKNVSMG 705
Query: 664 FGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
FGF+EFDSVETAT VC+DLQGT+LDGHALILQLCH KKD Q KK KDKSSTKLLVRNV
Sbjct: 706 FGFVEFDSVETATGVCKDLQGTVLDGHALILQLCHVKKDGQAAKKNGKDKSSTKLLVRNV 765
Query: 724 AFEAQRK 730
AFEA K
Sbjct: 766 AFEATEK 772
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRN+ + ATE +LR+ FS FG + + + + + R G A+V Y + A A+
Sbjct: 757 STKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHR--GFAFVEYVTKQEAQNAL 814
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNST-------SQGTKTLKQRR 401
+ L ++ GR H++ R K+ +EL T S G ++L +R
Sbjct: 815 QALASTHLYGR--HLVIERAKEGETLEELRERTAAQFVDESSGFQSLSSKR 863
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S RL V+NLP A E LR+ FS+ G V++ ++ KD K S+ A++ Y E A A+
Sbjct: 2 SSRLCVKNLPKGADERRLRDVFSRKGEVTDAKVIRTKDGK-SRQFAFIGYRTNEEADEAL 60
Query: 358 EVLDNS 363
+ +N+
Sbjct: 61 KYFNNT 66
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 484 AGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP----STKTLALVVFLE 539
A K +G +S+ LV+N+ ++++E +L ++F FG + + LP S + A V ++
Sbjct: 747 AAKKNGKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEYVT 806
Query: 540 PVEAAAAFKGLAYKRYKGVPLYLEWA 565
EA A + LA G L +E A
Sbjct: 807 KQEAQNALQALASTHLYGRHLVIERA 832
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+ TE LR FS G+I +L K G R FAF+ + T+QEA+ A++
Sbjct: 758 TKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLP-MKFGSHRGFAFVEYVTKQEAQNALQA 816
Query: 61 FNKSYL 66
++L
Sbjct: 817 LASTHL 822
>gi|357168436|ref|XP_003581646.1| PREDICTED: probable RNA-binding protein 19-like [Brachypodium
distachyon]
Length = 894
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/769 (52%), Positives = 536/769 (69%), Gaps = 46/769 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+CVKNLPK E RLR+ FS+KGE+TDAK++RTKDGKSR FAFIGFRT ++A EA+KY
Sbjct: 24 SRLCVKNLPKGADEKRLREVFSRKGEVTDAKVIRTKDGKSRHFAFIGFRTNEDAVEALKY 83
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNP----VLAAKRGEKK 116
FN +Y+DT +I+CE+ARK+GDP+ PRPWSR+SLKK + SED+ N L + +G+
Sbjct: 84 FNNTYIDTSKITCEVARKIGDPDAPRPWSRHSLKKPEYNSEDKANTSDVNALKSSKGQGI 143
Query: 117 TIE----KVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMAD-QKAKVSENISQAIKG 171
+I+ K + +DP+L EFL+VMQPR K+KMWANDT L A ++K ++ + A+
Sbjct: 144 SIDVGGSKDSVVNDPKLKEFLEVMQPRSKAKMWANDTTGTLDAPVTESKKTQKSAAAVSE 203
Query: 172 GEKSITLHVKSDKSNVITDSQATEKSKNAAADEL---MSDMDYFKSRVKKDWSDSESEDD 228
G+ S +N A+EK + + + M+D ++FKS+++K+WSDSES+DD
Sbjct: 204 GDSSSEEDFDEKMTNDSPLEDASEKLQTESKRDKNMNMTDAEFFKSKIRKNWSDSESDDD 263
Query: 229 SA----GDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNP 284
+ G + DD+D +E + N+ N +++ + K+ V E+ E+VDP N
Sbjct: 264 DSGDQLGTNTDDEDSSDESLDANERNQLVDQKSNLNQKNH----VAEKATMEEVVDPDNQ 319
Query: 285 -----------------------SSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSK 321
S+S D +Q LE+GRL++ NLPY TED+L E S+
Sbjct: 320 ESEHIECEQRDENHANQEKEDVESASITDEKQLALETGRLYICNLPYATTEDDLVELCSQ 379
Query: 322 FGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS 381
+G+V + HIVVDK TK S G YVL+++P+SA RA++ LDN FQGRLL V A+ ++
Sbjct: 380 YGDVDQAHIVVDKTTKLSTGRGYVLFSLPDSAVRALDELDNLSFQGRLLRVKAAKPLNNN 439
Query: 382 DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSD 441
+ H LKQ++ E++KASE G+T+AWNS +MR DTVVENIARK+G+SKS+
Sbjct: 440 KFESSH--VIDEKMNLKQQKLEQKKASEIGGDTRAWNSFYMRQDTVVENIARKNGISKSE 497
Query: 442 LLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKN 501
LL REA+DLAVRIALGET VIAETKK L+ +GVNV++LEE ++ K + LKRSNHV LVKN
Sbjct: 498 LLHREADDLAVRIALGETHVIAETKKYLSRSGVNVAALEENTSKKNEKLKRSNHVILVKN 557
Query: 502 LPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLY 561
LP++SSE +LA MF K GSLDK+ILP T+ ALVVF+E EA AFK L Y RYK PLY
Sbjct: 558 LPFNSSEEDLAAMFQKHGSLDKIILPPTRVFALVVFVEATEARHAFKKLLYTRYKDTPLY 617
Query: 562 LEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVK 621
LEWAP ++LS +S ++ + V+GE +A+++Q +EGV +IDPDRVESRSLFVK
Sbjct: 618 LEWAPDNILSPTSIHVEEEETN-VIGERIVAKAIVDQTVEGVGAEEIDPDRVESRSLFVK 676
Query: 622 NLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRD 681
NLNFKT DE+L++HF +K G + S VKKH+K GKNVSMGFGF+EFDS+ETAT+VC+D
Sbjct: 677 NLNFKTTDESLKQHFSTKLKIGSLKSATVKKHIKKGKNVSMGFGFVEFDSIETATSVCKD 736
Query: 682 LQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
LQGT+LDGHALILQLCH KKD + KK EKDKSSTKLLVRNVAFEA K
Sbjct: 737 LQGTLLDGHALILQLCHGKKDSKTAKKNEKDKSSTKLLVRNVAFEATEK 785
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRN+ + ATE +LR+ FS FG + + + + + R G A+V + + A A+
Sbjct: 770 STKLLVRNVAFEATEKDLRQLFSPFGQLKSLRLPMKFGSHR--GFAFVEFVTKQEAQNAL 827
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+ L ++ GR H++ R K+ +EL T+
Sbjct: 828 QALASTHLYGR--HLVIERAKEGETLEELRARTA 859
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S RL V+NLP A E LRE FS+ G V++ ++ KD K S+ A++ + E A A+
Sbjct: 23 SSRLCVKNLPKGADEKRLREVFSRKGEVTDAKVIRTKDGK-SRHFAFIGFRTNEDAVEAL 81
Query: 358 EVLDNS 363
+ +N+
Sbjct: 82 KYFNNT 87
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+ TE LR FS G++ +L K G R FAF+ F T+QEA+ A++
Sbjct: 771 TKLLVRNVAFEATEKDLRQLFSPFGQLKSLRLP-MKFGSHRGFAFVEFVTKQEAQNALQA 829
Query: 61 FNKSYL 66
++L
Sbjct: 830 LASTHL 835
>gi|297804178|ref|XP_002869973.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315809|gb|EFH46232.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 788
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/704 (56%), Positives = 507/704 (72%), Gaps = 23/704 (3%)
Query: 33 MRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
MR+ DGKSRQFAFIGFR+ QEA+EAIKYFNKSYLDT RI EIA KVGD N PR WSR S
Sbjct: 1 MRSNDGKSRQFAFIGFRSAQEAQEAIKYFNKSYLDTSRIFVEIAHKVGDENAPRRWSRLS 60
Query: 93 LKKEKEVSEDEKNPV--LAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTL 150
KKE+E +E+ K + K +K E DDP+ EFL+V R KSK+W+ND
Sbjct: 61 HKKEEEANENSKKSSTEVLNNGNAKGGKKKKAEVDDPEFQEFLEV-HDRSKSKIWSNDMS 119
Query: 151 IGLMADQKAKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMD 210
I ++ K + +A E I + + + +D++ T+KSK AA + +SDM+
Sbjct: 120 IPPAPEETGKEKVLVKKA---DEPMIFNGAEPNNAKRSSDTEKTKKSKVVAASDDVSDME 176
Query: 211 YFKSRVKKDWSDSESED---DSAGDDDDDDDGEEEEEEENDHNGD-SNEECDSIIKDSIH 266
YFKSR+KK+ SDS+S++ DS+ D+ DDDG+ E + H+ D N D + ++
Sbjct: 177 YFKSRIKKNLSDSDSDNESEDSSEDEASDDDGKAEA---DGHDADIRNFPIDGDV-EAGG 232
Query: 267 SGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVS 326
++ E+ G + K +VL++GRLFVRNLPYTATE+EL EHFSKFG +S
Sbjct: 233 VDKDDDGDTMEVEADGKVAQELKADSDDVLDTGRLFVRNLPYTATEEELMEHFSKFGEIS 292
Query: 327 EVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQEL 386
EVH+V+DK+TKRS+GIAY+LY IPE A+RA+E LDNS FQGRLLHV+PA+H+++SDKQ
Sbjct: 293 EVHLVLDKETKRSRGIAYILYPIPECAARAMEELDNSSFQGRLLHVLPAKHRETSDKQV- 351
Query: 387 HNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE 446
N TS KT KQ+REE+RKASEA GNTKAWNSLFMRPDT++ENI R +GVSKS+LLDRE
Sbjct: 352 -NDTSNLPKTFKQKREEQRKASEAGGNTKAWNSLFMRPDTILENIVRVYGVSKSELLDRE 410
Query: 447 ANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDS 506
A D AVR+ALGET+VIAETK+AL AGVNV+SLEEF+ D RS H+ LVKNLP+ S
Sbjct: 411 AEDPAVRLALGETKVIAETKEALAKAGVNVTSLEEFATRNGDENNRSKHILLVKNLPFAS 470
Query: 507 SEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAP 566
+E ELA+MFGKFGSLDK+ILP TKT+ALVVFLEP EA AA KG++YKRYK PLYLEWAP
Sbjct: 471 TEKELAQMFGKFGSLDKIILPPTKTMALVVFLEPAEARAALKGMSYKRYKDAPLYLEWAP 530
Query: 567 SDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFK 626
++L + T N + + V E+ +R LEQQ+E IDPD ES L VKNL+FK
Sbjct: 531 GNIL-EPKTLPDNNEEKSDVEENGVRRVNLEQQVE------IDPDVTESNVLHVKNLSFK 583
Query: 627 TCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTI 686
T D+ L+KH + +K+G+ILSVK+ KH+KNGKN+S G+GF+EFDSVETATNV RDLQGT+
Sbjct: 584 TTDDGLKKHLTKLVKQGKILSVKIIKHVKNGKNLSRGYGFVEFDSVETATNVYRDLQGTV 643
Query: 687 LDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
LDGHALIL+ C K+ ++ K + KDK STKL V+NVAFEA +K
Sbjct: 644 LDGHALILRFCENKRSDKAGKDSGKDKPSTKLHVKNVAFEATKK 687
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 484 AGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-----LALVVFL 538
AGK G + + VKN+ +++++ EL ++F FG + + LP A V F+
Sbjct: 662 AGKDSGKDKPSTKLHVKNVAFEATKKELKQLFSPFGQIKSMRLPKRNIEQYAGFAFVEFV 721
Query: 539 EPVEAAAAFKGLAYKRYKGVPLYLEWAPSD----VLSQSSTSKGNQKND 583
EA A K L+ + G L LEWA D + + S +K +++ND
Sbjct: 722 TKQEALNAKKALSSTHFYGRHLVLEWANDDNSMEAIRKRSAAKLDEEND 770
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L V+N+ + AT+ EL++ FS FG + + + ++ ++ G A+V + + A A
Sbjct: 672 STKLHVKNVAFEATKKELKQLFSPFGQIKSMRLP-KRNIEQYAGFAFVEFVTKQEALNAK 730
Query: 358 EVLDNSIFQGRLL--------HVMPARHKKSSDKQELHNSTSQGTKTLK 398
+ L ++ F GR L + M A K+S+ K + N ++ K+ K
Sbjct: 731 KALSSTHFYGRHLVLEWANDDNSMEAIRKRSAAKLDEENDNAKKRKSSK 779
>gi|38345802|emb|CAE03574.2| OSJNBa0085I10.19 [Oryza sativa Japonica Group]
gi|38568013|emb|CAE05198.3| OSJNBa0070C17.5 [Oryza sativa Japonica Group]
Length = 904
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/781 (52%), Positives = 536/781 (68%), Gaps = 59/781 (7%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+CVKNLPK E RLR+ FS+KGE+TDAK++RTKDGKSRQFAF+GFRT +EAEEA+KY
Sbjct: 23 SRLCVKNLPKGADEGRLREVFSRKGEVTDAKVIRTKDGKSRQFAFVGFRTNEEAEEALKY 82
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEK-----NPVLAAKRGEK 115
FN +Y+DTC+I+CE+ARK+GDP PRPWSR+SLKK + S+D+ + L + +G+K
Sbjct: 83 FNNTYIDTCKITCEVARKIGDPEAPRPWSRHSLKKPEYNSKDKTKTGDVSAPLKSSKGQK 142
Query: 116 KTIE----KVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKG 171
+ + K + DP+ EFL+VMQPR K+KMWANDT+ L D AK S +S+ +
Sbjct: 143 VSDDVGGSKGSAASDPKFQEFLEVMQPRSKAKMWANDTMGTL--DASAKDSMVVSEKPEK 200
Query: 172 GEKSITLHVKSDKSNV-----ITDSQATEKSKNAAADEL-----------MSDMDYFKSR 215
+K++ + S + + Q+ ++ M+DMD+FKS+
Sbjct: 201 PQKNVPVSENDSSSGDSSDEEMANDQSESDDSSSEEASEELKIESKQGKDMTDMDFFKSK 260
Query: 216 VKKDWSDSESEDDSAGD------DDDDDDGEEEEEEEND---HNGDSNEECDSIIKD-SI 265
+KK+WSDSES+ + +GD DD+D E + +E D H DS ++ K+ ++
Sbjct: 261 IKKNWSDSESDSEDSGDQSDHSTDDEDSSDESHDADEKDEIAHQKDSLNLKKNVDKEMTL 320
Query: 266 HSGVGEEDANGEIVDPGNPSSSSK----------------DVQQEVLESGRLFVRNLPYT 309
+E N + + N S K D ++ LE+GRLF NLPY
Sbjct: 321 EGSTVQEAGNSDNKEVENLDSQLKEDDNQEKEDEEAALITDEKKLALETGRLFFCNLPYA 380
Query: 310 ATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRL 369
TE +L E S++G+V + IVVDK TK S G YVL+++P+SA RA+E LDNS FQGRL
Sbjct: 381 TTEGDLVELCSQYGDVDQARIVVDKTTKLSTGRGYVLFSLPDSAVRALE-LDNSSFQGRL 439
Query: 370 LHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVE 429
L V A K + +++ +S + +LKQ++ ++RKASE SG+T+AWNS +MR DTV E
Sbjct: 440 LRVKAA---KPLNNKKIESSYEEKKMSLKQQKLDQRKASEISGDTRAWNSFYMRQDTVAE 496
Query: 430 NIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDG 489
NIARK+G+SKS+LLDREA+DLAVRIALGET VIAETKK L+ +GVNV++LEE ++ + +
Sbjct: 497 NIARKNGISKSELLDREADDLAVRIALGETHVIAETKKYLSRSGVNVAALEELASKRNEK 556
Query: 490 LKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKG 549
KRSNHV LVKNLPY S E +LA MF K GSLDK+ILP T+ ALVVF+E EA AFK
Sbjct: 557 FKRSNHVILVKNLPYSSCEEDLATMFRKHGSLDKIILPPTRVFALVVFVEATEARHAFKK 616
Query: 550 LAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADID 609
L Y RYK PLYLEWAP ++LS +S + + D VVG+ +A++EQ +EGV+ +ID
Sbjct: 617 LLYTRYKDTPLYLEWAPENILSPTSAPVEDDEKD-VVGDRIVTKAIVEQTVEGVSAEEID 675
Query: 610 PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEF 669
PDRVESRS+FVKNLNFKT DE+L++HF +K G + S VKKH+KNGKNVSMGFGF+EF
Sbjct: 676 PDRVESRSVFVKNLNFKTSDESLKQHFSTKLKSGSLKSATVKKHIKNGKNVSMGFGFVEF 735
Query: 670 DSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQR 729
DSVETAT+VC+DLQGT+LDGHALILQLCH +KD Q KK EKDKSSTKLLVRNVAFEA
Sbjct: 736 DSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQ-TKKNEKDKSSTKLLVRNVAFEATE 794
Query: 730 K 730
K
Sbjct: 795 K 795
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRN+ + ATE +LR+ FS FG + + + + + R G A+V + + A A+
Sbjct: 780 STKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHR--GFAFVEFVTKQEAQNAL 837
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS-------QGTKTLKQRREEERKASEA 410
+ L ++ GR H++ R K+ +EL T+ G + L ++R++ E
Sbjct: 838 QALASTHLYGR--HLVIERAKEGETLEELRARTAAQFVDEQSGFQRLSKKRKQTSLVDEG 895
Query: 411 S 411
S
Sbjct: 896 S 896
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S RL V+NLP A E LRE FS+ G V++ ++ KD K S+ A+V + E A A+
Sbjct: 22 SSRLCVKNLPKGADEGRLREVFSRKGEVTDAKVIRTKDGK-SRQFAFVGFRTNEEAEEAL 80
Query: 358 EVLDNS 363
+ +N+
Sbjct: 81 KYFNNT 86
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+ TE LR FS G+I +L K G R FAF+ F T+QEA+ A++
Sbjct: 781 TKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLP-MKFGSHRGFAFVEFVTKQEAQNALQA 839
Query: 61 FNKSYL 66
++L
Sbjct: 840 LASTHL 845
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S L V+N+ F+ +++LR+ F G+I S+++ +K G + GF F+EF + +
Sbjct: 780 STKLLVRNVAFEATEKDLRQLFSPF---GQIKSLRLP--MKFGSH--RGFAFVEFVTKQE 832
Query: 675 ATNVCRDLQGTILDGHALILQ 695
A N + L T L G L+++
Sbjct: 833 AQNALQALASTHLYGRHLVIE 853
>gi|125549686|gb|EAY95508.1| hypothetical protein OsI_17353 [Oryza sativa Indica Group]
Length = 904
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/781 (52%), Positives = 536/781 (68%), Gaps = 59/781 (7%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+CVKNLPK E RLR+ FS+KGE+TDAK++RTKDGKSRQFAF+GFRT +EAEEA+KY
Sbjct: 23 SRLCVKNLPKGADEGRLREVFSRKGEVTDAKVIRTKDGKSRQFAFVGFRTNEEAEEALKY 82
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEK-----NPVLAAKRGEK 115
FN +Y+DTC+I+CE+ARK+GDP PRPWSR+SLKK + S+D+ + L + +G+K
Sbjct: 83 FNNTYIDTCKITCEVARKIGDPEAPRPWSRHSLKKPEYNSKDKTKTGDVSAPLKSSKGQK 142
Query: 116 KTIE----KVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKG 171
+ + K + DP+ EFL+VMQPR K+KMWANDT+ L D AK S +S+ +
Sbjct: 143 VSDDVGGSKGSAASDPKFQEFLEVMQPRSKAKMWANDTMGTL--DASAKDSMVVSEKPEK 200
Query: 172 GEKSITLHVKSDKSNV-----ITDSQATEKSKNAAADEL-----------MSDMDYFKSR 215
+K++ + S + + Q+ ++ M+DMD+FKS+
Sbjct: 201 PQKNVPVSENDSSSGDSSDEEMANDQSESDDSSSEEASEELKIESKQGKDMTDMDFFKSK 260
Query: 216 VKKDWSDSESEDDSAGD------DDDDDDGEEEEEEEND---HNGDSNEECDSIIKD-SI 265
+KK+WSDSES+ + +GD DD+D E + +E D H DS ++ K+ ++
Sbjct: 261 IKKNWSDSESDSEDSGDQSDHSTDDEDSSDESHDADEKDEIAHQKDSLNLKKNVDKEMTL 320
Query: 266 HSGVGEEDANGEIVDPGNPSSSSK----------------DVQQEVLESGRLFVRNLPYT 309
+E N + + N S K D ++ LE+GRLF NLPY
Sbjct: 321 EGSTVQEAGNSDNKEVENLDSQLKEDDNQEKEDEEAALITDEKKLALETGRLFFCNLPYA 380
Query: 310 ATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRL 369
TE +L E S++G+V + IVVDK TK S G YVL+++P+SA RA+E LDNS FQGRL
Sbjct: 381 TTEGDLVELCSQYGDVDQARIVVDKTTKLSTGRGYVLFSLPDSAVRALE-LDNSSFQGRL 439
Query: 370 LHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVE 429
L V A K + +++ +S + +LKQ++ ++RKASE SG+T+AWNS +MR DTV E
Sbjct: 440 LRVKAA---KPLNNKKIESSYEEKKMSLKQQKLDQRKASEISGDTRAWNSFYMRQDTVAE 496
Query: 430 NIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDG 489
NIARK+G+SKS+LLDREA++LAVRIALGET VIAETKK L+ +GVNV++LEE ++ + +
Sbjct: 497 NIARKNGISKSELLDREADNLAVRIALGETHVIAETKKYLSRSGVNVAALEELASKRNEK 556
Query: 490 LKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKG 549
KRSNHV LVKNLPY S E +LA MF K GSLDK+ILP T+ ALVVF+E EA AFK
Sbjct: 557 FKRSNHVILVKNLPYSSCEEDLATMFRKHGSLDKIILPPTRVFALVVFVEATEARHAFKK 616
Query: 550 LAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADID 609
L Y RYK PLYLEWAP ++LS +S + + D VVG+ +A++EQ +EGV+ +ID
Sbjct: 617 LLYTRYKDTPLYLEWAPENILSPTSAPVEDDEKD-VVGDRIVTKAIVEQTVEGVSAEEID 675
Query: 610 PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEF 669
PDRVESRS+FVKNLNFKT DE+L++HF +K G + S VKKH+KNGKNVSMGFGF+EF
Sbjct: 676 PDRVESRSVFVKNLNFKTSDESLKQHFSTKLKSGSLKSATVKKHIKNGKNVSMGFGFVEF 735
Query: 670 DSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQR 729
DSVETAT+VC+DLQGT+LDGHALILQLCH +KD Q KK EKDKSSTKLLVRNVAFEA
Sbjct: 736 DSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQ-TKKNEKDKSSTKLLVRNVAFEATE 794
Query: 730 K 730
K
Sbjct: 795 K 795
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRN+ + ATE +LR+ FS FG + + + + + R G A+V + + A A+
Sbjct: 780 STKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHR--GFAFVEFVTKQEAQNAL 837
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS-------QGTKTLKQRREEERKASEA 410
+ L ++ GR H++ R K+ +EL T+ G + L ++R++ E
Sbjct: 838 QALASTHLYGR--HLVIERAKEGETLEELRARTAAQFVDEQSGFQRLSKKRKQTSLVDEG 895
Query: 411 S 411
S
Sbjct: 896 S 896
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S RL V+NLP A E LRE FS+ G V++ ++ KD K S+ A+V + E A A+
Sbjct: 22 SSRLCVKNLPKGADEGRLREVFSRKGEVTDAKVIRTKDGK-SRQFAFVGFRTNEEAEEAL 80
Query: 358 EVLDNS 363
+ +N+
Sbjct: 81 KYFNNT 86
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+ TE LR FS G+I +L K G R FAF+ F T+QEA+ A++
Sbjct: 781 TKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLP-MKFGSHRGFAFVEFVTKQEAQNALQA 839
Query: 61 FNKSYL 66
++L
Sbjct: 840 LASTHL 845
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S L V+N+ F+ +++LR+ F G+I S+++ +K G + GF F+EF + +
Sbjct: 780 STKLLVRNVAFEATEKDLRQLFSPF---GQIKSLRLP--MKFGSH--RGFAFVEFVTKQE 832
Query: 675 ATNVCRDLQGTILDGHALILQ 695
A N + L T L G L+++
Sbjct: 833 AQNALQALASTHLYGRHLVIE 853
>gi|125591601|gb|EAZ31951.1| hypothetical protein OsJ_16124 [Oryza sativa Japonica Group]
Length = 867
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/750 (51%), Positives = 508/750 (67%), Gaps = 59/750 (7%)
Query: 32 LMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRY 91
L++ DGKSRQFAF+GFRT +EAEEA+KYFN +Y+DTC+I+CE+ARK+GDP PRPWSR+
Sbjct: 17 LIQPMDGKSRQFAFVGFRTNEEAEEALKYFNNTYIDTCKITCEVARKIGDPEAPRPWSRH 76
Query: 92 SLKKEKEVSEDEK-----NPVLAAKRGEKKTIE----KVTENDDPQLLEFLQVMQPRVKS 142
SLKK + S+D+ + L + +G+K + + K + DP+ EFL+VMQPR K+
Sbjct: 77 SLKKPEYNSKDKTKTGDVSAPLKSSKGQKVSDDVGGSKGSAASDPKFQEFLEVMQPRSKA 136
Query: 143 KMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLHVKSDKSNV-----ITDSQATEKS 197
KMWANDT+ L D AK S +S+ + +K++ + S + + Q+
Sbjct: 137 KMWANDTMGTL--DASAKDSMVVSEKPEKPQKNVPVSENDSSSGDSSDEEMANDQSESDD 194
Query: 198 KNAAADEL-----------MSDMDYFKSRVKKDWSDSESEDDSAGD------DDDDDDGE 240
++ M+DMD+FKS++KK+WSDSES+ + +GD DD+D E
Sbjct: 195 SSSEEASEELKIESKQGKDMTDMDFFKSKIKKNWSDSESDSEDSGDQSDHSTDDEDSSDE 254
Query: 241 EEEEEEND---HNGDSNEECDSIIKD-SIHSGVGEEDANGEIVDPGNPSSSSK------- 289
+ +E D H DS ++ K+ ++ +E N + + N S K
Sbjct: 255 SHDADEKDEIAHQKDSLNLKKNVDKEMTLEGSTVQEAGNSDNKEVENLDSQLKEDDNQEK 314
Query: 290 ---------DVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
D ++ LE+GRLF NLPY TE +L E S++G+V + IVVDK TK S
Sbjct: 315 EDEEAALITDEKKLALETGRLFFCNLPYATTEGDLVELCSQYGDVDQARIVVDKTTKLST 374
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
G YVL+++P+SA RA+E LDNS FQGRLL V A K + +++ +S + +LKQ+
Sbjct: 375 GRGYVLFSLPDSAVRALE-LDNSSFQGRLLRVKAA---KPLNNKKIESSYEEKKMSLKQQ 430
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
+ ++RKASE SG+T+AWNS +MR DTV ENIARK+G+SKS+LLDREA+DLAVRIALGET
Sbjct: 431 KLDQRKASEISGDTRAWNSFYMRQDTVAENIARKNGISKSELLDREADDLAVRIALGETH 490
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
VIAETKK L+ +GVNV++LEE ++ + + KRSNHV LVKNLPY S E +LA MF K GS
Sbjct: 491 VIAETKKYLSRSGVNVAALEELASKRNEKFKRSNHVILVKNLPYSSCEEDLATMFRKHGS 550
Query: 521 LDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQ 580
LDK+ILP T+ ALVVF+E EA AFK L Y RYK PLYLEWAP ++LS +S +
Sbjct: 551 LDKIILPPTRVFALVVFVEATEARHAFKKLLYTRYKDTPLYLEWAPENILSPTSAPVEDD 610
Query: 581 KNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHI 640
+ D VVG+ +A++EQ +EGV+ +IDPDRVESRS+FVKNLNFKT DE+L++HF +
Sbjct: 611 EKD-VVGDRIVTKAIVEQTVEGVSAEEIDPDRVESRSVFVKNLNFKTSDESLKQHFSTKL 669
Query: 641 KEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
K G + S VKKH+KNGKNVSMGFGF+EFDSVETAT+VC+DLQGT+LDGHALILQLCH +
Sbjct: 670 KSGSLKSATVKKHIKNGKNVSMGFGFVEFDSVETATSVCKDLQGTVLDGHALILQLCHGR 729
Query: 701 KDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
KD Q KK EKDKSSTKLLVRNVAFEA K
Sbjct: 730 KDGQ-TKKNEKDKSSTKLLVRNVAFEATEK 758
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRN+ + ATE +LR+ FS FG + + + + + R G A+V + + A A+
Sbjct: 743 STKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHR--GFAFVEFVTKQEAQNAL 800
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS-------QGTKTLKQRREEERKASEA 410
+ L ++ GR H++ R K+ +EL T+ G + L ++R++ E
Sbjct: 801 QALASTHLYGR--HLVIERAKEGETLEELRARTAAQFVDEQSGFQRLSKKRKQTSLVDEG 858
Query: 411 S 411
S
Sbjct: 859 S 859
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+ TE LR FS G+I +L K G R FAF+ F T+QEA+ A++
Sbjct: 744 TKLLVRNVAFEATEKDLRQLFSPFGQIKSLRL-PMKFGSHRGFAFVEFVTKQEAQNALQA 802
Query: 61 FNKSYL 66
++L
Sbjct: 803 LASTHL 808
Score = 39.3 bits (90), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S L V+N+ F+ +++LR+ F G+I S+++ +K G + GF F+EF + +
Sbjct: 743 STKLLVRNVAFEATEKDLRQLFSPF---GQIKSLRLP--MKFGSH--RGFAFVEFVTKQE 795
Query: 675 ATNVCRDLQGTILDGHALILQ 695
A N + L T L G L+++
Sbjct: 796 AQNALQALASTHLYGRHLVIE 816
>gi|168015560|ref|XP_001760318.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688332|gb|EDQ74709.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 878
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/778 (49%), Positives = 518/778 (66%), Gaps = 62/778 (7%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRICVKNLP++VTE+RLR+ F+ KGE+TDAK++RT+DG++RQF F+G+RTE+EA++A KY
Sbjct: 7 SRICVKNLPRHVTEERLREHFAAKGEVTDAKIIRTRDGRTRQFGFVGYRTEEEAKDAAKY 66
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS--LKKEKEVSEDE-KNPVLAAKRGEK-- 115
F++S+ DT R++CE+A+ VGDPN+PRPWSR+S K K S+D +NP +AK K
Sbjct: 67 FHRSFFDTSRLTCELAQAVGDPNLPRPWSRHSEGSSKFKPKSDDVVENPTTSAKDTGKFK 126
Query: 116 -------KTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQA 168
KT + END PQL EFL+VMQPR KSK+WANDT I A Q
Sbjct: 127 KNQDFRSKTADSELEND-PQLQEFLEVMQPRSKSKLWANDTKIASNGSDSASKHGKQKQG 185
Query: 169 IKGGEKSITLHVKSDKSNVITDSQATEKSKNAAA-DELMSDMDYFKSRVKKD-WSDSESE 226
K EK ++ +K+ V T S+ +K+ DE ++D+DY KSR K WSD + +
Sbjct: 186 SKK-EKKASVEMKT----VETFSRRVPINKDPVLKDETLTDLDYLKSRTKSGAWSDDDDD 240
Query: 227 DD--------------SAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVG-- 270
DD + +DDD+ EEE+E + + N+ D+++ I G
Sbjct: 241 DDASDKDAALDDANDLTTSSKEDDDEDGEEEDESEVEDEEMNDAADNVVIAEIDRDDGKN 300
Query: 271 -----EEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNV 325
E+ A G+ + + + Q+ V E+GRLFVRNLPYTATE+EL E F KFG +
Sbjct: 301 GLDHIEQSAEGD----AHVAPVLAEEQESVSETGRLFVRNLPYTATEEELAELFGKFGEL 356
Query: 326 SEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQE 385
SEVH+V+DK TKRSK +A+VLY IPE A RA+E LD SIFQGRL+H++PAR + E
Sbjct: 357 SEVHLVLDKTTKRSKAMAFVLYMIPECAVRAMEQLDKSIFQGRLIHILPARRPPPPPETE 416
Query: 386 LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDR 445
S G+ KQ +E +RKA+E SGNTKAWN LFMRPDT+ EN+AR++ ++KS+ LD
Sbjct: 417 KTTSMGPGSTKFKQEKESQRKAAELSGNTKAWNPLFMRPDTIAENVARQYNMTKSEFLDP 476
Query: 446 EANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYD 505
A+DLAVR+ALGET +IAETK+AL++ GVNV LE+ ++GK + RS+ V LVKNLP+
Sbjct: 477 NADDLAVRMALGETHIIAETKRALSDEGVNVEVLEDVASGKEIKVTRSSTVILVKNLPFS 536
Query: 506 SSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
++E EL MFG FGS+ +VILP TKTLALV +LE EA AFKGLAYKR+K VPLYLEWA
Sbjct: 537 TTEDELVSMFGVFGSIARVILPPTKTLALVEYLEAAEARRAFKGLAYKRFKHVPLYLEWA 596
Query: 566 PSDVLS---QSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVT-DADIDPDRVESRSLFVK 621
P ++L+ +S G +K VG+ +R +E Q+ +T D D+D ++RSLFVK
Sbjct: 597 PVNLLTGVKKSRVFTGAEKTKGAVGDKLLQRVAVETQVAALTEDDDVD----QARSLFVK 652
Query: 622 NLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCR 680
NLNF T + +L+KHF + I +G + SV + KK K+GK +SMGFGFIEFDSV+TA VC+
Sbjct: 653 NLNFSTTEVSLKKHFDQKITQGSVRSVTIKKKQSKSGKPLSMGFGFIEFDSVDTAKMVCQ 712
Query: 681 DLQGTILDGHALILQLCHA--------KKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+LQGT+L+GHALILQL H K KAE +SSTK++VRNVAFEA RK
Sbjct: 713 NLQGTVLEGHALILQLSHNSKKACGSDSKTSATKGKAESKESSTKIIVRNVAFEATRK 770
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S R+ V+NLP TE+ LREHF+ G V++ I+ +D R++ +V Y E A A
Sbjct: 6 SSRICVKNLPRHVTEERLREHFAAKGEVTDAKIIRTRDG-RTRQFGFVGYRTEEEAKDAA 64
Query: 358 EVLDNSIF 365
+ S F
Sbjct: 65 KYFHRSFF 72
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++ VRN+ + AT +L++ F+ FG + + + D +G A+V + + A A
Sbjct: 755 STKIIVRNVAFEATRKDLQQIFNPFGQIKSIRLPKKFDGNH-RGFAFVEFLTKKEAQNAF 813
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
E L N+ GR H++ R K+ +EL T+
Sbjct: 814 EALQNTHLYGR--HMVLERAKEGESLEELRARTA 845
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I V+N+ T L+ F+ G+I +L + DG R FAF+ F T++EA+ A +
Sbjct: 756 TKIIVRNVAFEATRKDLQQIFNPFGQIKSIRLPKKFDGNHRGFAFVEFLTKKEAQNAFEA 815
Query: 61 FNKSYL 66
++L
Sbjct: 816 LQNTHL 821
>gi|297806589|ref|XP_002871178.1| hypothetical protein ARALYDRAFT_349841 [Arabidopsis lyrata subsp.
lyrata]
gi|297317015|gb|EFH47437.1| hypothetical protein ARALYDRAFT_349841 [Arabidopsis lyrata subsp.
lyrata]
Length = 692
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 358/706 (50%), Positives = 451/706 (63%), Gaps = 98/706 (13%)
Query: 12 VTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRI 71
+TEDRLR+ FS+KGEITD KL R DG+SRQFA+IGFRTEQEA++AI YFNKS++DT +I
Sbjct: 1 MTEDRLRNVFSKKGEITDVKLRRKSDGRSRQFAYIGFRTEQEAQDAITYFNKSFIDTIQI 60
Query: 72 SCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEKVTENDDPQLLE 131
S E+A +P P +KE +V E+ ++ A +G+KK +K + DPQL E
Sbjct: 61 SVEVA-------IPPP------RKEGKVIENSEHFSNAYAKGDKKFKKKAEADHDPQLQE 107
Query: 132 FLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLHVKSDKSNVITDS 191
FL K K W+ND I + K KVS + +D+ N S
Sbjct: 108 FLD---QHTKLKFWSNDMCIP-RSSGKEKVS------------PVIFSNGADEPNKAKTS 151
Query: 192 QATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNG 251
+ ++N D++ SDM+YFKSR+ D E DS
Sbjct: 152 -LLDTTENKVGDDV-SDMEYFKSRIYGILQDDYYETDSR--------------------- 188
Query: 252 DSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTAT 311
+D+IH+ + D + VD VL++GRLFVRNLPYTAT
Sbjct: 189 ----------EDAIHAFPIDGDIEADRVD--------------VLDTGRLFVRNLPYTAT 224
Query: 312 EDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLH 371
E+EL EHFSKFG +SEVH+V+DK+TK S+G+A+VLY IPE A RA+E LDN FQGRLLH
Sbjct: 225 EEELTEHFSKFGEISEVHLVLDKETKNSRGMAFVLYQIPEYAKRAMEELDNKDFQGRLLH 284
Query: 372 VMPARHKKSSDKQ------ELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPD 425
++PA K DKQ N++S K KQ+REE+RKASEASGNTKAWNS FMRPD
Sbjct: 285 ILPA---KKPDKQVSVTSSMFRNNSSNLPKAFKQKREEQRKASEASGNTKAWNSFFMRPD 341
Query: 426 TVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAG 485
TVVENI R +GV+KS+ LDRE +D AVR+ALGET+VI ETK+AL AGV V+SLEEFSA
Sbjct: 342 TVVENIVRCYGVTKSEFLDRECDDPAVRLALGETKVIMETKEALAKAGVRVTSLEEFSAR 401
Query: 486 KTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAA 545
K D RS H+ LVKNLP+ SSE ELA+MFG+FGSLDK++LP TKTLAL VFL+P EA A
Sbjct: 402 KGDVKNRSKHILLVKNLPFASSEKELAQMFGRFGSLDKIVLPRTKTLALFVFLKPAEARA 461
Query: 546 AFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTD 605
A KG+ YKRYK PLYLEWAP D+L + N+K + V E+D +R L+QQ+
Sbjct: 462 AMKGMKYKRYKDAPLYLEWAPEDILEPKALPDNNEKT-SDVEENDVRRLNLDQQV----- 515
Query: 606 ADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKN--VSMG 663
ID D ES L+VKNLNF T DE+LRKH E +K+G+ILSVK+K KNGK+ S G
Sbjct: 516 -GIDLDITESNVLYVKNLNFNTTDESLRKHLTELVKQGKILSVKIK---KNGKSRPRSSG 571
Query: 664 FGFIEFDSVETATNVCRDLQG-TILDGHALILQLCHAKKDEQVVKK 708
+GF+EFDSVETAT+V RDLQG T LD H LIL+ K+ + K+
Sbjct: 572 YGFVEFDSVETATSVYRDLQGTTFLDRHKLILRFSENKRTFEATKQ 617
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAI 58
R+ V+NLP TE+ L + FS+ GEI++ L+ K+ K SR AF+ ++ + A+ A+
Sbjct: 213 RLFVRNLPYTATEEELTEHFSKFGEISEVHLVLDKETKNSRGMAFVLYQIPEYAKRAM 270
>gi|302810024|ref|XP_002986704.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
gi|300145592|gb|EFJ12267.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
Length = 730
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 332/732 (45%), Positives = 454/732 (62%), Gaps = 98/732 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+CVKNLP YVT+D+LR+ F KG++TDAK+MRT+DGKSR+F F+GF +++EAE A+ Y
Sbjct: 5 SRVCVKNLPTYVTDDKLREHFGAKGQVTDAKVMRTRDGKSRRFGFVGFYSQEEAESAVAY 64
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIE- 119
FN+S+LDT R+ CE+AR VGD + RPWSR+S K E P A+ KKT+
Sbjct: 65 FNRSFLDTSRLVCEVARSVGDAAV-RPWSRHS--KGSSAYEKTHAPEEKAQLKPKKTVSV 121
Query: 120 KVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLH 179
+ DP L EFL VMQPR K+K+WAND D K
Sbjct: 122 DRDQEQDPGLDEFLSVMQPRTKTKVWAND-------DAK--------------------- 153
Query: 180 VKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDG 239
+T Q + K+ + A +SD+ Y KS+V++ WSD D DD+
Sbjct: 154 --------LTTQQPSSKASDDAGP--VSDLYYLKSKVRQQWSD-----------DSDDEK 192
Query: 240 EEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESG 299
E E + D+ + PGN +++DV + ++G
Sbjct: 193 ETEGGAKPQQQADTGDR------------------------PGN-EEAAQDVAE--TDTG 225
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RLFVRNL YT +E+EL F ++G V +VH++ DK+T RSKG YV + +PE A+RA+
Sbjct: 226 RLFVRNLAYTTSEEELASLFGQYGEVVQVHLICDKETNRSKGYGYVGFTLPEEATRAMTE 285
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNS 419
LDNSIFQGRLLHV+PA+ + S KQ+L + LKQ RE ERK E+SGNT+AWN
Sbjct: 286 LDNSIFQGRLLHVLPAKQQTSQVKQKLDRPMN-----LKQEREVERKKKESSGNTQAWNP 340
Query: 420 LFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSL 479
L+MRPDTV EN+AR++G+S+ + LD EA D+AVR+ALGET V++ETK++L GVNV L
Sbjct: 341 LYMRPDTVAENVARQYGISRREFLDPEAEDVAVRLALGETHVLSETKRSLAQQGVNVELL 400
Query: 480 EEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLE 539
E+ SA KT G+ RS+ V LVKNLP+ ++E +L +F +GSL +++LP TKT+A+V FLE
Sbjct: 401 EKISASKTSGVTRSSRVILVKNLPFSTTEVDLFGVFCPYGSLGRLVLPPTKTVAIVEFLE 460
Query: 540 PVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQ 599
EA AF+ LAY+++K VPLYLEWAP D+LS+ +K+ VV ++ +Q
Sbjct: 461 SSEARKAFESLAYRKFKHVPLYLEWAPQDLLSE-------KKDGGVVPAKLEGTSMKDQ- 512
Query: 600 LEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVK-KHLKNGK 658
+ D S ++FVKNLNFKT D +LRKHF +K G + + VK K K G
Sbjct: 513 ---LVANDEGAASTRSSTVFVKNLNFKTTDASLRKHFEGRVKAGSLRTATVKRKPSKTGA 569
Query: 659 NVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKL 718
++SMGFGF+EFDS +TA VC+++QG++LDGHAL+LQ A DE+ K + SS+KL
Sbjct: 570 SLSMGFGFVEFDSADTAERVCKEMQGSVLDGHALVLQPSRAGDDEK-PSKVDAKGSSSKL 628
Query: 719 LVRNVAFEAQRK 730
+VRNVAFEA RK
Sbjct: 629 IVRNVAFEATRK 640
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S++ V+N+ T L+ FS G++ KL + DG R FAF+ F T+QEA+ A +
Sbjct: 626 SKLIVRNVAFEATRKDLKQLFSPFGQVKKVKLPKKFDGNHRGFAFVEFVTKQEAQNAFEA 685
Query: 61 FNKSYLDTCRISCEIAR 77
S+L + E AR
Sbjct: 686 LGSSHLYGRHLVLEWAR 702
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 126/297 (42%), Gaps = 45/297 (15%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP++ TE +L F +G++ + + +K +A V + A +A E L
Sbjct: 418 ILVKNLPFSTTEVDLFGVFCPYGSLGRLVL------PPTKTVAIVEFLESSEARKAFESL 471
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQE--LHNSTSQGTKTLKQR-REEERKASEASGNTKAW 417
F+ L++ A S+K++ + + +GT Q +E AS S
Sbjct: 472 AYRKFKHVPLYLEWAPQDLLSEKKDGGVVPAKLEGTSMKDQLVANDEGAASTRSSTVFVK 531
Query: 418 NSLFMRPDTVVENIARKH-------GVSKSDLLDREANDLAVRIALG-----------ET 459
N F D + RKH G ++ + R+ + +++G
Sbjct: 532 NLNFKTTDASL----RKHFEGRVKAGSLRTATVKRKPSKTGASLSMGFGFVEFDSADTAE 587
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAG------KTDGLKRSNHVFLVKNLPYDSSEGELAK 513
+V E + ++ + V L+ AG K D K S+ +V+N+ ++++ +L +
Sbjct: 588 RVCKEMQGSVLDGHALV--LQPSRAGDDEKPSKVDA-KGSSSKLIVRNVAFEATRKDLKQ 644
Query: 514 MFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
+F FG + KV LP + + A V F+ EA AF+ L G L LEWA
Sbjct: 645 LFSPFGQVKKVKLPKKFDGNHRGFAFVEFVTKQEAQNAFEALGSSHLYGRHLVLEWA 701
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRN+ + AT +L++ FS FG V +V + D +G A+V + + A A
Sbjct: 625 SSKLIVRNVAFEATRKDLKQLFSPFGQVKKVKLPKKFDGNH-RGFAFVEFVTKQEAQNAF 683
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRRE 402
E L +S GR L + AR ++ D+ + ++ +RR+
Sbjct: 684 EALGSSHLYGRHLVLEWAREGETLDELRIKAASQVAPSKPNKRRK 728
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S R+ V+NLP T+D+LREHF G V++ ++ +D K S+ +V + E A A+
Sbjct: 4 SSRVCVKNLPTYVTDDKLREHFGAKGQVTDAKVMRTRDGK-SRRFGFVGFYSQEEAESAV 62
Query: 358 EVLDNSIF 365
+ S
Sbjct: 63 AYFNRSFL 70
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S + VKNL D+ LR+HFG +G++ KV + ++GK S FGF+ F S E
Sbjct: 4 SSRVCVKNLPTYVTDDKLREHFG---AKGQVTDAKVMR-TRDGK--SRRFGFVGFYSQEE 57
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSST 716
A + + LD L+ ++ + D V + K S+
Sbjct: 58 AESAVAYFNRSFLDTSRLVCEVARSVGDAAVRPWSRHSKGSS 99
>gi|297807131|ref|XP_002871449.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317286|gb|EFH47708.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 745
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 360/727 (49%), Positives = 459/727 (63%), Gaps = 89/727 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VKN+PKYVTED+LR FS+KGEITD KL R DG SRQFA+IGFR EQEA++AI Y
Sbjct: 6 SRIIVKNVPKYVTEDQLRGIFSRKGEITDVKLKRLSDGTSRQFAYIGFRNEQEAQDAITY 65
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNKS++DT RIS +A DP PR + K E A +G+KK +K
Sbjct: 66 FNKSFIDTLRISVLVA----DPP-PRTQGKADEKSEH-----------AYAKGDKKIKKK 109
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLHV 180
+ DPQL EFL + K K W+ND I + K KVS + G K L
Sbjct: 110 PEADHDPQLQEFLHEHK---KLKFWSNDMCIP-PSTGKEKVS---PVSFSNGAKRSFLDP 162
Query: 181 KSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGE 240
K + N + D +SDM+Y KSR+KK+ SDS+S
Sbjct: 163 KKTRKNKVGDD--------------VSDMEYLKSRIKKNLSDSDS--------------- 193
Query: 241 EEEEEENDHNGDSNEECDSIIKDSIHSGV--GEEDANGEIVDPGNPSSSSKDVQQEVLES 298
D DS E D+IH GE +A+ D + + D +VL++
Sbjct: 194 -------DCETDSRE-------DAIHVFPIDGEVEADRVDKDDDDDDGHAMDGNDDVLDT 239
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
RLFV LPY+ E+EL EHFSKFG++SEVH+V+DKDT+ S+G+AYVLY IPESA RA+E
Sbjct: 240 SRLFVHGLPYSTAEEELTEHFSKFGDISEVHLVLDKDTRNSRGMAYVLYLIPESAKRAME 299
Query: 359 VLDNSIFQGRLLHVMPARHKKSSDKQELH----------NSTSQGTKTLKQRREEERKAS 408
LD FQGR LH++PA+ S KQ+ H +++S K+ KQ+REE+RKAS
Sbjct: 300 KLDKLPFQGRTLHILPAKPCAKSAKQDFHQLFIMAFPNRDNSSNLPKSFKQKREEQRKAS 359
Query: 409 EASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKA 468
EA GNTKAWNS FMRPDT++EN+ R +GV+KS+LLDRE D AVR+ALGET+VI ETK+A
Sbjct: 360 EACGNTKAWNSFFMRPDTILENLVRSYGVTKSELLDRECEDPAVRLALGETKVIMETKEA 419
Query: 469 LTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS 528
L AGV V+SLEEF+A K D RS H+ LVKNLP+ S+E ELA+MF KFGSLDK+ILP
Sbjct: 420 LAKAGVRVASLEEFAARKGDEKNRSKHILLVKNLPFASTEKELAQMFRKFGSLDKIILPP 479
Query: 529 TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGE 588
TKT+ALVVFLEP EA AA G+AYKRYK VPLYLEWAP D+L + + N++ + V E
Sbjct: 480 TKTMALVVFLEPAEARAALNGMAYKRYKDVPLYLEWAPRDILEPKALA-DNKEEKSAVEE 538
Query: 589 HDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSV 648
+DA+R L+QQ+ I D ES L VKNL+FKT DE L+KH +K+G+ILSV
Sbjct: 539 NDARRVNLDQQV------GIYSDIAESNVLHVKNLSFKTTDEGLKKHLTGLVKQGKILSV 592
Query: 649 KVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDL--QGTILDGHALILQLCHAKKDEQVV 706
K+ + K + S G+GF+EFDSVETAT+V RDL +G +LDGH+LIL K+ E V
Sbjct: 593 KIIRDWKRRR--SSGYGFVEFDSVETATSVYRDLPVEGNVLDGHSLILSYSENKRSETVG 650
Query: 707 KKAEKDK 713
+ ++K K
Sbjct: 651 EGSDKIK 657
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L+ R+ V+N+P TED+LR FS+ G +++V + D S+ AY+ + + A
Sbjct: 3 LDWSRIIVKNVPKYVTEDQLRGIFSRKGEITDVKLKRLSDGT-SRQFAYIGFRNEQEAQD 61
Query: 356 AIEVLDNSIFQGRLLHVM----PARHKKSSDKQELH 387
AI + S + V+ P R + +D++ H
Sbjct: 62 AITYFNKSFIDTLRISVLVADPPPRTQGKADEKSEH 97
>gi|302818104|ref|XP_002990726.1| hypothetical protein SELMODRAFT_185536 [Selaginella moellendorffii]
gi|300141464|gb|EFJ08175.1| hypothetical protein SELMODRAFT_185536 [Selaginella moellendorffii]
Length = 738
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 334/739 (45%), Positives = 455/739 (61%), Gaps = 104/739 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+CVKNLP YVT+D+L++ F KG++TDAK+MRT++GKSR+F F+GF +++EAE A+ Y
Sbjct: 5 SRVCVKNLPAYVTDDKLKEHFGAKGQVTDAKVMRTREGKSRRFGFVGFYSQEEAESAVAY 64
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIE- 119
FN+S+LDT R+ CE+AR VGD + RPWSR+S K E P A+ KKT+
Sbjct: 65 FNRSFLDTSRLVCEVARSVGDAAV-RPWSRHS--KGSSAYEKTHAPEEKAQLKPKKTVSV 121
Query: 120 KVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLH 179
+ DP L EFL VMQPR K+K+WAND D K S+A
Sbjct: 122 DRDQEQDPGLDEFLSVMQPRTKTKVWAND-------DAKLTTQHPSSKA----------- 163
Query: 180 VKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDG 239
SD + + SD+ Y KS+V++ WSD D DD+
Sbjct: 164 --SDDTGPV------------------SDLHYLKSKVRQQWSD-----------DSDDEK 192
Query: 240 EEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESG 299
E E E + D+ + PGN +++DV + ++G
Sbjct: 193 ETEGEAKPQQQADTGDR------------------------PGN-EEAAQDVAE--TDTG 225
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RLFVRNL YT +E+EL F ++G V +VH++ DK+T RSKG YV + +PE A+RA+
Sbjct: 226 RLFVRNLAYTTSEEELVSLFGQYGEVVQVHVICDKETNRSKGYGYVGFMLPEEATRAMTE 285
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNS 419
LDNSIFQGRLLHV+PA+ + S K +L + LKQ RE ERK E+SGNT+AWN
Sbjct: 286 LDNSIFQGRLLHVLPAKQQTSQVKHKLDRPMN-----LKQEREVERKKKESSGNTQAWNP 340
Query: 420 LFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSL 479
L+MRPDTV EN+AR++G+S+ + LD EA D+AVR+ALGET V++ETK++L GVNV L
Sbjct: 341 LYMRPDTVAENVARQYGISRREFLDPEAEDVAVRLALGETHVLSETKRSLAQQGVNVELL 400
Query: 480 EEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLE 539
E+ SA KT G+ RS+ V LVKNLP+ ++E +L +F +GSL +++LP TKT+A+V FLE
Sbjct: 401 EKISASKTSGVTRSSRVILVKNLPFSTTEADLFGVFCPYGSLGRLVLPPTKTVAIVEFLE 460
Query: 540 PVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQ 599
EA AF+ LAY+++K VPLYLEWAP D+LS +K D V + ++ Q
Sbjct: 461 SSEARKAFESLAYRKFKHVPLYLEWAPQDLLS--------EKKDGGVVPAKLEGTSIKDQ 512
Query: 600 L----EGVTDA---DIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVK- 651
L EG +I P +S ++FVKNLNFKT D +LRKHF +K G + + VK
Sbjct: 513 LVANDEGAASTRLIEIRP--WQSSTVFVKNLNFKTTDASLRKHFEGRVKAGSLRTATVKR 570
Query: 652 KHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEK 711
K K G ++SMGFGF+EFDS +TA VC+++QG++LDGHAL+LQ A DE+ K +
Sbjct: 571 KPSKTGASLSMGFGFVEFDSTDTAERVCKEMQGSVLDGHALVLQPSRAGDDEK-PSKVDA 629
Query: 712 DKSSTKLLVRNVAFEAQRK 730
SS+KL+VRNVAFEA RK
Sbjct: 630 RGSSSKLIVRNVAFEATRK 648
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S++ V+N+ T L+ FS G++ KL + DG R FAF+ F T+QEA+ A +
Sbjct: 634 SKLIVRNVAFEATRKDLKLLFSPFGQVKKVKLPKKFDGNHRGFAFVEFVTKQEAQNAFEA 693
Query: 61 FNKSYLDTCRISCEIAR 77
S+L + E AR
Sbjct: 694 LGSSHLYGRHLVLEWAR 710
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 127/305 (41%), Gaps = 53/305 (17%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP++ TE +L F +G++ + + +K +A V + A +A E L
Sbjct: 418 ILVKNLPFSTTEADLFGVFCPYGSLGRLVL------PPTKTVAIVEFLESSEARKAFESL 471
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQE--LHNSTSQGTKTLKQR-REEERKASEASGNTKAW 417
F+ L++ A S+K++ + + +GT Q +E AS + W
Sbjct: 472 AYRKFKHVPLYLEWAPQDLLSEKKDGGVVPAKLEGTSIKDQLVANDEGAASTRLIEIRPW 531
Query: 418 NSLFMRPDTVVENI--------ARKH-------GVSKSDLLDREANDLAVRIALG----- 457
S V+N+ RKH G ++ + R+ + +++G
Sbjct: 532 QS----STVFVKNLNFKTTDASLRKHFEGRVKAGSLRTATVKRKPSKTGASLSMGFGFVE 587
Query: 458 ------ETQVIAETKKALTNAGVNVSSLEEFSAG------KTDGLKRSNHVFLVKNLPYD 505
+V E + ++ + V L+ AG K D + S+ +V+N+ ++
Sbjct: 588 FDSTDTAERVCKEMQGSVLDGHALV--LQPSRAGDDEKPSKVDA-RGSSSKLIVRNVAFE 644
Query: 506 SSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPL 560
++ +L +F FG + KV LP + + A V F+ EA AF+ L G L
Sbjct: 645 ATRKDLKLLFSPFGQVKKVKLPKKFDGNHRGFAFVEFVTKQEAQNAFEALGSSHLYGRHL 704
Query: 561 YLEWA 565
LEWA
Sbjct: 705 VLEWA 709
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRN+ + AT +L+ FS FG V +V + D +G A+V + + A A
Sbjct: 633 SSKLIVRNVAFEATRKDLKLLFSPFGQVKKVKLPKKFDGNH-RGFAFVEFVTKQEAQNAF 691
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRRE 402
E L +S GR L + AR ++ D+ + ++ +RR+
Sbjct: 692 EALGSSHLYGRHLVLEWAREGETLDELRIKAASQVAPSKPNKRRK 736
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S R+ V+NLP T+D+L+EHF G V++ ++ ++ K S+ +V + E A A+
Sbjct: 4 SSRVCVKNLPAYVTDDKLKEHFGAKGQVTDAKVMRTREGK-SRRFGFVGFYSQEEAESAV 62
Query: 358 EVLDNSIF 365
+ S
Sbjct: 63 AYFNRSFL 70
>gi|186521407|ref|NP_001119193.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332003956|gb|AED91339.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 690
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 355/736 (48%), Positives = 459/736 (62%), Gaps = 97/736 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VKN+PKYVTED+LR FS+KGEITD KL R DG+SRQFA+IGFR+EQ+A++AI Y
Sbjct: 4 SRIIVKNVPKYVTEDQLRGIFSEKGEITDVKLKRLSDGRSRQFAYIGFRSEQKAQDAITY 63
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNK++ + +IS +A DP R + V A +G+K+ +K
Sbjct: 64 FNKNFKHSHQISVLVA----DPPPRR----------------TQGKVDAYAKGDKQIQKK 103
Query: 121 VTEND-DPQLLEFLQVMQPRVKSKMWANDTLI----GLMADQKAKVSENISQAIKGGEKS 175
E D DPQL EFL K K W+ND I G KAK S
Sbjct: 104 DPEVDHDPQLQEFLHQEH---KLKFWSNDMCIHPSNGADDPNKAKRS------------- 147
Query: 176 ITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDD 235
DS+ T KSK D++ SDM+YFKSR+KK+ DS+ E DS
Sbjct: 148 ------------FLDSKKTRKSK--VGDDV-SDMEYFKSRIKKNL-DSDCETDS------ 185
Query: 236 DDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEV 295
E+ N D + D + KD D G+ D +V
Sbjct: 186 ------REDAINVFPIDGEVKADRVDKD----------------DDGHAMEVEADGSDDV 223
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L++GRLFV LPY+ TE+EL EHFSKFG++SEVH+V+DKDT+ +G+A+VLY IPESA
Sbjct: 224 LDAGRLFVHGLPYSTTEEELMEHFSKFGDISEVHLVLDKDTRSCRGMAFVLYLIPESAKM 283
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
A++ LD FQGR LH++PA+ + S KQ +++S K+ K+ REE+RKASEA GNT
Sbjct: 284 AMDKLDKLPFQGRTLHILPAKPRAMSAKQV--DNSSNLPKSFKKEREEQRKASEACGNTN 341
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVN 475
AWNS FMRPDT++EN+ R +GV+KS+LLDRE D AVR+ALGET+VI ETK+AL AGV
Sbjct: 342 AWNSFFMRPDTILENLVRSYGVTKSELLDRECEDPAVRLALGETRVIMETKEALAKAGVR 401
Query: 476 VSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALV 535
V+SLEEF+A K D RS H+ LVK+LP+ S+E ELA+MF KFGSLDK++LP TKT+ALV
Sbjct: 402 VTSLEEFAARKGDVKNRSKHILLVKHLPFASTEKELAQMFRKFGSLDKIVLPPTKTMALV 461
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRAL 595
VFLE EA AA GLAY RYK PLYLEWAP D+L + + +K A V E+DA+R
Sbjct: 462 VFLEAAEARAAMNGLAYTRYKDAPLYLEWAPRDILEPKALADNKEKKSA-VEENDARRVN 520
Query: 596 LEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLK 655
L+QQ+ I D ES L VKNL+FKT DE L+KH +K+G+ILS VK+ ++
Sbjct: 521 LDQQV------GIYSDITESNVLHVKNLSFKTTDEGLKKHLTGVVKQGKILS--VKQIIR 572
Query: 656 NG-KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS 714
+ + S G+GF+EFDSVETAT+V RDL G +LDGH+LIL K+ E V + ++K
Sbjct: 573 DWTRRRSSGYGFVEFDSVETATSVYRDLPGNVLDGHSLILNFSENKRSETVGEGSDKVTK 632
Query: 715 STKLLVRNVAFEAQRK 730
KL V+NVAFEA +K
Sbjct: 633 LAKLHVKNVAFEATKK 648
>gi|4582489|emb|CAB40378.1| putative protein [Arabidopsis thaliana]
gi|7268757|emb|CAB78963.1| putative protein [Arabidopsis thaliana]
Length = 772
Score = 590 bits (1521), Expect = e-165, Method: Compositional matrix adjust.
Identities = 357/740 (48%), Positives = 463/740 (62%), Gaps = 110/740 (14%)
Query: 33 MRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
MR+ DGKSRQF FIGFR+ QEA++AIKYFN +YL T I EIA KVGD N PRPWSR S
Sbjct: 1 MRSNDGKSRQFGFIGFRSAQEAQQAIKYFNNTYLGTSLIIVEIAHKVGDENAPRPWSRLS 60
Query: 93 LKKEKEV--SEDEKNPVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTL 150
KKE+E S E AK G+K+ E DDP+ EFL+V Q R KSK+W+ND
Sbjct: 61 HKKEEEAKKSSSEGLKDGNAKGGKKRK----AEVDDPEFQEFLEVHQ-RSKSKIWSNDMS 115
Query: 151 IGLMADQKAKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMD 210
I ++ K + +A E+ ++ V+ K+ +D++ T+KSK AA + +SDM+
Sbjct: 116 IPPAPEETGKEKVLVKKA---DEQIVSNGVEPKKAKKSSDTEKTKKSKVVAASDDVSDME 172
Query: 211 YFKSRVKKDWSDSESED---DSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKD--SI 265
YFKSR+KK+ SDSES++ DS+ D+ DDDG+ E + + D++ I D +
Sbjct: 173 YFKSRIKKNLSDSESDNESEDSSEDEAGDDDGKAETDGQ-----DADIRYFPIDGDVEAG 227
Query: 266 HSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNV 325
G ++ E+ G + SK V +VL++GRLFVRNLPYTAT
Sbjct: 228 GVGKDDDGDAMEVEGDGKVAQESKAVSDDVLDTGRLFVRNLPYTAT-------------- 273
Query: 326 SEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQE 385
A+E LDNS FQGRLLH++PA+H+++SDKQ
Sbjct: 274 ------------------------------AMEELDNSSFQGRLLHILPAKHRETSDKQV 303
Query: 386 LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDR 445
N TS KT KQ+REE+RKASEA G+TKAWNSLFMRPDT+ R +GVSKS+LLDR
Sbjct: 304 --NDTSNLPKTFKQKREEQRKASEAGGDTKAWNSLFMRPDTLAS--FRVYGVSKSELLDR 359
Query: 446 EANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYD 505
EA D AVR+ALGET+VIAETK+AL AGVNV+SLE+F+ D RS H+ LVKNLP+
Sbjct: 360 EAEDPAVRLALGETKVIAETKEALAKAGVNVTSLEKFATRNGDEKNRSKHILLVKNLPFA 419
Query: 506 SSEGELAKMFGKFGSLDKVILPSTKTLALV---------------VFLEPVEAAAAFKGL 550
S+E ELA+MFGKFGSLDK+ILP TKT+ALV VFLEP EA AA KG+
Sbjct: 420 STEKELAQMFGKFGSLDKIILPPTKTMALVLFFPCVLRQYIGRIAVFLEPAEARAALKGM 479
Query: 551 AYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDP 610
AYKRYK PLYLEWAP ++L + N++ + + E+ +R LEQQ+E IDP
Sbjct: 480 AYKRYKDAPLYLEWAPGNILEPKNLPDTNEER-SDIEENGVRRVNLEQQVE------IDP 532
Query: 611 DRVESR-----SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFG 665
D E++ SL NL+FKT DE L+KHF + +K+G+ILSV + KH KN K +S G+G
Sbjct: 533 DVTETKKVAYVSLNWYNLSFKTTDEGLKKHFTKLVKQGKILSVTIIKHKKNEKYLSSGYG 592
Query: 666 FIEFDSVETATNVCRDL---------------QGTILDGHALILQLCHAKKDEQVVKKAE 710
F+EFDSVETAT+V RDL QGT+LDGHALIL+ C K+ ++V K +
Sbjct: 593 FVEFDSVETATSVYRDLQLIGLDGVEWHFLLWQGTVLDGHALILRFCENKRSDKVGKDSN 652
Query: 711 KDKSSTKLLVRNVAFEAQRK 730
KDK TKL V+N+AFEA ++
Sbjct: 653 KDKPCTKLHVKNIAFEATKR 672
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 499 VKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-----LALVVFLEPVEAAAAFKGLAYK 553
VKN+ +++++ EL ++F FG + + LP A V F+ EA A K LA
Sbjct: 662 VKNIAFEATKRELRQLFSPFGQIKSMRLPKKNIGQYAGYAFVEFVTKQEALNAKKALAST 721
Query: 554 RYKGVPLYLEWAPSD----VLSQSSTSKGNQKND 583
+ G L LEWA D + + S +K +++ND
Sbjct: 722 HFYGRHLVLEWANDDNSMEAIRKRSAAKFDEEND 755
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L V+N+ + AT+ ELR+ FS FG + + + K+ + G A+V + + A A +
Sbjct: 659 KLHVKNIAFEATKRELRQLFSPFGQIKSMRLP-KKNIGQYAGYAFVEFVTKQEALNAKKA 717
Query: 360 LDNSIFQGRLL--------HVMPARHKKSSDKQELHNSTSQGTKTLK 398
L ++ F GR L + M A K+S+ K + N ++ K+ K
Sbjct: 718 LASTHFYGRHLVLEWANDDNSMEAIRKRSAAKFDEENDNARKRKSSK 764
>gi|13548328|emb|CAC35875.1| putative protein [Arabidopsis thaliana]
Length = 768
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 348/728 (47%), Positives = 449/728 (61%), Gaps = 106/728 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VKN+PKYVTED+LR FS+KGEITD KL R DG+SRQFA+IGFR+EQ+A++AI Y
Sbjct: 32 SRIIVKNVPKYVTEDQLRGIFSEKGEITDVKLKRLSDGRSRQFAYIGFRSEQKAQDAITY 91
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNK++ + +IS +A DP P R K V A +G+K+ +K
Sbjct: 92 FNKNFKHSHQISVLVA----DP----PPRRTQGK------------VDAYAKGDKQIQKK 131
Query: 121 VTEND-DPQLLEFLQVMQPRVKSKMWANDTLI----GLMADQKAKVSENISQAIKGGEKS 175
E D DPQL EFL K K W+ND I G KAK S
Sbjct: 132 DPEVDHDPQLQEFLHQEH---KLKFWSNDMCIHPSNGADDPNKAKRS------------- 175
Query: 176 ITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDD 235
DS+ T KSK D++ SDM+YFKSR+KK+ DS+ E DS
Sbjct: 176 ------------FLDSKKTRKSK--VGDDV-SDMEYFKSRIKKNL-DSDCETDS------ 213
Query: 236 DDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEV 295
E+ N D + D + KD D G+ D +V
Sbjct: 214 ------REDAINVFPIDGEVKADRVDKD----------------DDGHAMEVEADGSDDV 251
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L++GRLFV LPY+ TE+EL EHFSKFG++SEVH+V+DKDT+ +G+A+VLY IPESA
Sbjct: 252 LDAGRLFVHGLPYSTTEEELMEHFSKFGDISEVHLVLDKDTRSCRGMAFVLYLIPESAKM 311
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELH----------NSTSQGTKTLKQRREEER 405
A++ LD FQGR LH++PA+ + S KQ+ H +++S K+ K+ REE+R
Sbjct: 312 AMDKLDKLPFQGRTLHILPAKPRAMSAKQDFHQMFIMDFPNRDNSSNLPKSFKKEREEQR 371
Query: 406 KASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAET 465
KASEA GNT AWNS FMRPDT++EN+ R +GV+KS+LLDRE D AVR+ALGET+VI ET
Sbjct: 372 KASEACGNTNAWNSFFMRPDTILENLVRSYGVTKSELLDRECEDPAVRLALGETRVIMET 431
Query: 466 KKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVI 525
K+AL AGV V+SLEEF+A K D RS H+ LVK+LP+ S+E ELA+MF KFGSLDK++
Sbjct: 432 KEALAKAGVRVTSLEEFAARKGDVKNRSKHILLVKHLPFASTEKELAQMFRKFGSLDKIV 491
Query: 526 LPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAV 585
LP TKT+ALVVFLE EA AA GLAY RYK PLYLEWAP D+L + + +K A
Sbjct: 492 LPPTKTMALVVFLEAAEARAAMNGLAYTRYKDAPLYLEWAPRDILEPKALADNKEKKSA- 550
Query: 586 VGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRI 645
V E+DA+R L+QQ+ I D ES L VKNL+FKT DE L+KH +K+G+I
Sbjct: 551 VEENDARRVNLDQQV------GIYSDITESNVLHVKNLSFKTTDEGLKKHLTGVVKQGKI 604
Query: 646 LSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDL--QGTILDGHALILQLCHAKKDE 703
LSVK+ + + S G+GF+EFDSVETAT+V RDL +G +LDGH+LIL K+ E
Sbjct: 605 LSVKIIRDWTRRR--SSGYGFVEFDSVETATSVYRDLPVEGNVLDGHSLILNFSENKRSE 662
Query: 704 QVVKKAEK 711
V + ++K
Sbjct: 663 TVGEGSDK 670
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 278 IVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTK 337
+ +P N SS S R+ V+N+P TED+LR FS+ G +++V + D
Sbjct: 22 LANPKNVSSGS-----------RIIVKNVPKYVTEDQLRGIFSEKGEITDVKLKRLSDG- 69
Query: 338 RSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA 375
RS+ AY+ + + A AI + + + V+ A
Sbjct: 70 RSRQFAYIGFRSEQKAQDAITYFNKNFKHSHQISVLVA 107
>gi|242077146|ref|XP_002448509.1| hypothetical protein SORBIDRAFT_06g028190 [Sorghum bicolor]
gi|241939692|gb|EES12837.1| hypothetical protein SORBIDRAFT_06g028190 [Sorghum bicolor]
Length = 620
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 273/449 (60%), Positives = 340/449 (75%), Gaps = 7/449 (1%)
Query: 282 GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
G P + K + LE+GRL++ NLPY +ED+L E ++G+V + HIVVDK TK S G
Sbjct: 70 GAPITDEKKL---ALETGRLYICNLPYATSEDDLVELCRQYGDVEQAHIVVDKTTKLSTG 126
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRR 401
YVL+ +P+SA RA++ LDNS FQGR+L V A+ +++K E ++ T LKQ+R
Sbjct: 127 RGYVLFCLPDSAVRALDELDNSSFQGRVLRVKAAK-PLNNNKLESNHETVVEKMNLKQKR 185
Query: 402 EEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQV 461
E++KASE SG+T+AWNS +MR DTVVENIARK+G+SKS+LLDREA+DLAVRIALGET V
Sbjct: 186 LEQKKASEISGDTRAWNSFYMRQDTVVENIARKNGISKSELLDREADDLAVRIALGETHV 245
Query: 462 IAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSL 521
IAETKK L+ +GVNV++LEE ++ + + KRSNHV LVKNLP++S+E ELA MF K GSL
Sbjct: 246 IAETKKFLSRSGVNVAALEELASKRNE--KRSNHVILVKNLPFNSTEEELAAMFQKHGSL 303
Query: 522 DKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQK 581
DK+ILP T+ ALVVF+E EA AFK L Y RYK PLYLEWAP ++LS +S ++
Sbjct: 304 DKIILPPTRVFALVVFVEATEARHAFKKLLYARYKDTPLYLEWAPENILSPTSAPVDEEE 363
Query: 582 NDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIK 641
+ V GE +A +EQ +EGV+ DIDPDRVESRS+FVKNLNFKT DE+L++HF +K
Sbjct: 364 KNEV-GERIVTKANIEQTVEGVSAEDIDPDRVESRSVFVKNLNFKTTDESLKQHFSAKLK 422
Query: 642 EGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKK 701
G + S VKKH+K GK VSMGFGF+EFDSVETAT VC+DLQGT+LDGHALILQLCH KK
Sbjct: 423 SGSLKSATVKKHVKKGKTVSMGFGFVEFDSVETATGVCKDLQGTVLDGHALILQLCHGKK 482
Query: 702 DEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
D Q KK KDKSSTKLLVRNVAFEA K
Sbjct: 483 DGQAAKKNGKDKSSTKLLVRNVAFEATEK 511
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRN+ + ATE +LR+ FS FG + + + + + R G A+V Y + A A+
Sbjct: 496 STKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHR--GFAFVEYVTKQEAQNAL 553
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS-------QGTKTLKQRREE 403
+ L ++ GR H++ R K+ +EL T+ G ++L ++R++
Sbjct: 554 QALASTHLYGR--HLVIERAKEGETLEELRARTAAQFVDEHSGFQSLSRKRKQ 604
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 484 AGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP----STKTLALVVFLE 539
A K +G +S+ LV+N+ ++++E +L ++F FG + + LP S + A V ++
Sbjct: 486 AAKKNGKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEYVT 545
Query: 540 PVEAAAAFKGLAYKRYKGVPLYLEWA 565
EA A + LA G L +E A
Sbjct: 546 KQEAQNALQALASTHLYGRHLVIERA 571
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+ TE LR FS G+I +L K G R FAF+ + T+QEA+ A++
Sbjct: 497 TKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLP-MKFGSHRGFAFVEYVTKQEAQNALQA 555
Query: 61 FNKSYL 66
++L
Sbjct: 556 LASTHL 561
>gi|115460478|ref|NP_001053839.1| Os04g0611500 [Oryza sativa Japonica Group]
gi|113565410|dbj|BAF15753.1| Os04g0611500, partial [Oryza sativa Japonica Group]
Length = 536
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 270/433 (62%), Positives = 335/433 (77%), Gaps = 6/433 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+GRLF NLPY TE +L E S++G+V + IVVDK TK S G YVL+++P+SA RA+
Sbjct: 1 TGRLFFCNLPYATTEGDLVELCSQYGDVDQARIVVDKTTKLSTGRGYVLFSLPDSAVRAL 60
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
E LDNS FQGRLL V A K + +++ +S + +LKQ++ ++RKASE SG+T+AW
Sbjct: 61 E-LDNSSFQGRLLRVKAA---KPLNNKKIESSYEEKKMSLKQQKLDQRKASEISGDTRAW 116
Query: 418 NSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVS 477
NS +MR DTV ENIARK+G+SKS+LLDREA+DLAVRIALGET VIAETKK L+ +GVNV+
Sbjct: 117 NSFYMRQDTVAENIARKNGISKSELLDREADDLAVRIALGETHVIAETKKYLSRSGVNVA 176
Query: 478 SLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVF 537
+LEE ++ + + KRSNHV LVKNLPY S E +LA MF K GSLDK+ILP T+ ALVVF
Sbjct: 177 ALEELASKRNEKFKRSNHVILVKNLPYSSCEEDLATMFRKHGSLDKIILPPTRVFALVVF 236
Query: 538 LEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLE 597
+E EA AFK L Y RYK PLYLEWAP ++LS +S + + D VVG+ +A++E
Sbjct: 237 VEATEARHAFKKLLYTRYKDTPLYLEWAPENILSPTSAPVEDDEKD-VVGDRIVTKAIVE 295
Query: 598 QQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNG 657
Q +EGV+ +IDPDRVESRS+FVKNLNFKT DE+L++HF +K G + S VKKH+KNG
Sbjct: 296 QTVEGVSAEEIDPDRVESRSVFVKNLNFKTSDESLKQHFSTKLKSGSLKSATVKKHIKNG 355
Query: 658 KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTK 717
KNVSMGFGF+EFDSVETAT+VC+DLQGT+LDGHALILQLCH +KD Q KK EKDKSSTK
Sbjct: 356 KNVSMGFGFVEFDSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQ-TKKNEKDKSSTK 414
Query: 718 LLVRNVAFEAQRK 730
LLVRNVAFEA K
Sbjct: 415 LLVRNVAFEATEK 427
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRN+ + ATE +LR+ FS FG + + + + + R G A+V + + A A+
Sbjct: 412 STKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHR--GFAFVEFVTKQEAQNAL 469
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS-------QGTKTLKQRREEERKASEA 410
+ L ++ GR H++ R K+ +EL T+ G + L ++R++ E
Sbjct: 470 QALASTHLYGR--HLVIERAKEGETLEELRARTAAQFVDEQSGFQRLSKKRKQTSLVDEG 527
Query: 411 S 411
S
Sbjct: 528 S 528
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+ TE LR FS G+I +L K G R FAF+ F T+QEA+ A++
Sbjct: 413 TKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLP-MKFGSHRGFAFVEFVTKQEAQNALQA 471
Query: 61 FNKSYL 66
++L
Sbjct: 472 LASTHL 477
>gi|384245230|gb|EIE18725.1| hypothetical protein COCSUDRAFT_20380 [Coccomyxa subellipsoidea
C-169]
Length = 876
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 319/780 (40%), Positives = 443/780 (56%), Gaps = 58/780 (7%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRICVK LPK ++ +LR+ FS+KG+ITDAK+MRT+DG SRQF F+GFR+ EA+ A+KY
Sbjct: 3 SRICVKGLPKQCSDQQLREHFSEKGDITDAKIMRTEDGHSRQFGFVGFRSVAEAQAAVKY 62
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS--LKKEKEVSEDEKNPVLAAKRGEKKTI 118
FN+S++ R++ E A K ++PR WS+Y+ + +++ +DE+N E K +
Sbjct: 63 FNRSFMGAQRLTVEFAEKFRGSHLPRAWSKYTEGSSRYQKLHQDEENEEKPKGVRELKKL 122
Query: 119 EK-------VTENDDPQLLEFLQVMQPRVKSKMWAN-DTLI----GLMADQKAKVSENIS 166
+K E +DP+L EFLQ+MQPR +W+N DT + K
Sbjct: 123 KKQQRMGGTAPEEEDPKLAEFLQLMQPRRAGAIWSNEDTELAAAAAQTRTAAGKAGSTAP 182
Query: 167 QAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAA-ADELMSDMDYFKSRVKKDWSDSES 225
+A GGE ++ K + QA K+AA D +SDMDY +SRV ++ +S S
Sbjct: 183 EASNGGEALAGDRRQASKGGKM---QAVPAQKDAAVVDTGVSDMDYLRSRVTGNFDESAS 239
Query: 226 EDDSAGDDDDDDDGE----EEEEEENDHNGD------SNEECDSIIKDSIH-SGVGEEDA 274
++D+ D+D +G E + H GD E D D + +G
Sbjct: 240 DEDNLEDEDAGIEGAVSITYAIERKAVHAGDVAAQQAGAEASDDSDGDELDLDRMGSHGK 299
Query: 275 NGEIVDPGNPSSSSKDVQQE-----VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVH 329
G + G S++++V+ + + E+GRLFVRNLPY+ATE +L E F + G +SEVH
Sbjct: 300 AGTNI--GGEGSAAEEVRAQTKEARIEETGRLFVRNLPYSATEADLAEAFGQHGQLSEVH 357
Query: 330 IVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNS 389
IVVDK T++SKG A + Y A A E LD SIFQGRLLHV+PA H+ +
Sbjct: 358 IVVDKATRKSKGFALIQYEEVADAITAKEELDESIFQGRLLHVLPA-HRPPPQRSAAQAE 416
Query: 390 TSQGTKTL--KQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA 447
T +L KQ E +GN AWN+LFMRPDTV +A +GVS+++LLDR+A
Sbjct: 417 ARPRTDSLLRKQLACLTSICREGAGNRAAWNTLFMRPDTVAAAVAEHYGVSRAELLDRDA 476
Query: 448 NDLAVRIALGETQVIAETKKALTNAGVNV-----SSLEEFSAGKTDGLKRSNHVFLVKNL 502
+DL VR+ALGET VIA TK+AL AGV+V ++ A + RS LVKNL
Sbjct: 477 SDLPVRMALGETHVIAMTKRALGEAGVDVAALEAAAAAGGRAAAKTAVARSPTTLLVKNL 536
Query: 503 PYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYL 562
PY +SE EL + FGK G++ +++LP T+TLALV F E +A AFK LAYKR++ VPLYL
Sbjct: 537 PYTASEAELEETFGKLGAIARLVLPPTRTLALVQFAEAADARRAFKALAYKRFQSVPLYL 596
Query: 563 EWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKN 622
EWAP+DV S + + + V AK+ ++ +E V D D ES +++VKN
Sbjct: 597 EWAPADVFSPDAPLQ-PRLQAQAVVAKKAKKVDTDEPVE-VADLPAGDDEAESTTIYVKN 654
Query: 623 LNFKTCDENLRKHFGEHIKE--GRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVC 679
L F T D LR HF + G I + V K+ +GK +S GFGFIE S + A
Sbjct: 655 LAFATTDATLRAHFDAVVSAAGGSIRAASVAKRKGPDGKPLSSGFGFIECSSEDVAKIAI 714
Query: 680 RDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSS---------TKLLVRNVAFEAQRK 730
+ QG+ILDGH L LQL K + K + K+ ++ TKL+VRNVAFEA RK
Sbjct: 715 KKQQGSILDGHKLALQLSLRKVGGKAAKPSAKETAAAADTGKAKGTKLVVRNVAFEATRK 774
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 485 GKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLE 539
GK G K +V+N+ ++++ ++A +F FG + LP S + A V FL
Sbjct: 755 GKAKGTK-----LVVRNVAFEATRKDVAALFAPFGQIKSCRLPKKFDGSHRGFAFVDFLT 809
Query: 540 PVEAAAAFKGLAYKRYKGVPLYLEWAPS-----DVLSQSSTSKGNQKNDAVVGEHDAKR 593
EA +A + +A G L +EWA + D L + ++ DA +H AK+
Sbjct: 810 KQEAKSAAEAVAGTHLYGRRLVVEWAEADEAGLDELRAKTAARFRPDEDAAGDQHPAKK 868
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+ T + F+ G+I +L + DG R FAF+ F T+QEA+ A +
Sbjct: 760 TKLVVRNVAFEATRKDVAALFAPFGQIKSCRLPKKFDGSHRGFAFVDFLTKQEAKSAAEA 819
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ E A
Sbjct: 820 VAGTHLYGRRLVVEWA 835
>gi|308802782|ref|XP_003078704.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116057157|emb|CAL51584.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 907
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 322/807 (39%), Positives = 456/807 (56%), Gaps = 102/807 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+CVKN+PK+V E RLR+ F+ +GE+TD K++RT DG SRQ AF+G++TE+ A A+KY
Sbjct: 33 SRLCVKNVPKHVKEQRLREHFASQGEVTDVKVVRTADGTSRQMAFVGYKTEKAATRAMKY 92
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSL----------KKEKEVSEDEKNPVLAA 110
F+K+++DT RI AR V +PRPWS+YS KK E+E + A
Sbjct: 93 FDKTFIDTSRIEVTYARSVHSAQIPRPWSKYSAGSSANKEVEKKKAPAKEEEEGERWIGA 152
Query: 111 KRGEKKTIEKVTE------------NDDPQLLEFLQVMQPRVKSKMWAN------DTLIG 152
+ +K +K+ E +DP+ EF+Q+M P+ KSK W++ DTL
Sbjct: 153 REAKKLAKQKLREKYDPKYKAQQMMKEDPKFREFMQLMMPQ-KSKFWSDGFFEDMDTLEQ 211
Query: 153 -------LMADQKAKVSENISQAIKGGEKSITLHVKSD---KSNVITDSQATEKSKNAAA 202
L D A S++ Q + G K SD ++ + + A
Sbjct: 212 YKDSEKVLREDGDAGSSDDEYQDMDGDSKGKERESGSDGEESASDLESDDEESDEDDVAH 271
Query: 203 DELMSDMDYFKSR----------------VKKDWSDSESEDDSAGDDDDDDDGEEEEEEE 246
D+ +SDMDYFK + + DSES+ DS +DD DD ++ E EE
Sbjct: 272 DDKVSDMDYFKLKQGAINDESESEFSSESEEDSEDDSESDSDSEVREDDIDDLDKSEGEE 331
Query: 247 NDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNL 306
+NEE +K+ V+P ++ D++ + E+GR+FVRNL
Sbjct: 332 ------ANEEKSEDVKE---------------VEPKTKDVNAADMEA-LSETGRIFVRNL 369
Query: 307 PYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQ 366
PYTATE+E+ E F +FG +S VHI+VD+ TKRSKG+AYV +AIPE +A+E +D SIFQ
Sbjct: 370 PYTATEEEVAELFEQFGKLSAVHILVDRSTKRSKGLAYVTFAIPEDGVKAMEAVDGSIFQ 429
Query: 367 GRLLHVMPARHKKSSD------KQELHNSTSQGTK-TLKQRREEERKASEASGNTKAWNS 419
GRL+H++PA+ D + + +G K + K R+ ERKA +GNTKAWNS
Sbjct: 430 GRLIHLLPAKRAPQIDTTMGGVGRVGGDDEEEGKKDSFKTERDAERKAD--AGNTKAWNS 487
Query: 420 LFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSL 479
LFMR DTV IA +GV+K++LL+ A+DLAVR+ALGE VIA TK+ LT++GV+ SL
Sbjct: 488 LFMRQDTVAAAIAAHYGVTKAELLESGADDLAVRMALGEAHVIATTKQQLTDSGVDADSL 547
Query: 480 EEFSAGKTDG----LKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALV 535
E +A +KRSN V L+KNLPY++ E EL +M K+G L + ILP T T+A+V
Sbjct: 548 ERSAAASGAKSSSRVKRSNCVLLLKNLPYEADEDELKEMCEKYGGLARFILPDTHTIAVV 607
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTS--KGNQKNDAVVGEHDAKR 593
FLE EA AF LAYKRY+ VPLY+EWAP D+ + +S KG + E D +
Sbjct: 608 EFLEAAEARRAFTSLAYKRYRHVPLYVEWAPDDIFAATSKVDIKGAKALAVAEAESDLAQ 667
Query: 594 ALLEQ---QLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHF--GEHIKEGRILSV 648
A E+ +++ +D ++ S+FVK L+F T + LR HF GR++SV
Sbjct: 668 AAREKTKAKVDATSDLAGKSSNDDALSIFVKGLDFGTTENKLRSHFLVAAQRVSGRVVSV 727
Query: 649 KVKKHL-KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHA----KKDE 703
++ H GK +S GFGF+E DS TA +V LQG+ LDG L L+L + D
Sbjct: 728 RIVTHRGPGGKTLSRGFGFVELDSHRTAKSVLNALQGSSLDGKTLKLELSSQGSGREDDG 787
Query: 704 QVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ K S+TKL++RNVAFEA ++
Sbjct: 788 KESSKVPTGFSATKLVIRNVAFEATKR 814
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 272 EDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
EDA+ GN +SS V +EV + RL V+N+P E LREHF+ G V++V +V
Sbjct: 7 EDASARARADGNGIASS-SVDEEVRPTSRLCVKNVPKHVKEQRLREHFASQGEVTDVKVV 65
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
D S+ +A+V Y ++A+RA++ D + + V AR
Sbjct: 66 RTADGT-SRQMAFVGYKTEKAATRAMKYFDKTFIDTSRIEVTYAR 109
>gi|145345423|ref|XP_001417211.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577438|gb|ABO95504.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 874
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 324/803 (40%), Positives = 461/803 (57%), Gaps = 93/803 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+CVKN+PK++ +DRLR+ F+ GE+TD K++RT DG SRQ AF+G++TE A +A+KY
Sbjct: 1 SRLCVKNVPKHLKDDRLREHFAAMGEVTDVKIVRTADGTSRQMAFVGYKTEAMATKALKY 60
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRY----SLKKEKEV------------SEDEK 104
F+K+++DT R+ + AR V +PRPWS+Y S KEKE ++ E
Sbjct: 61 FDKTFIDTSRVEVQYARSVHSAQIPRPWSKYSAGSSANKEKETIKSGHGGKGEAEADGEG 120
Query: 105 NPVLAAKRGEKKTIEKVTENDDP-----QLL-------EFLQVMQPRVKSKMWAN----- 147
+ A+ +K +K E DP QL+ EF+++M P K K W++
Sbjct: 121 ERWIGAREAKKLAKQKARELHDPRYKAEQLMKVDPKFREFMELMVP-AKQKFWSDGFFED 179
Query: 148 -DTLIGLMADQKAKVSENISQAIKGGE-------KSITLHVKSDKSNVITDSQATEKSKN 199
D L G D + + E+ E + +SDKS +DS++ +S
Sbjct: 180 QDKLEGYRKDSEKALREDGDAGSSDDEYQDLDESEDEEQEEESDKSGSESDSESESESDK 239
Query: 200 AAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDS 259
A D+ +SDMDYFKS+ + W D E + + + DD + ++E+ + D + D + DS
Sbjct: 240 VANDDKVSDMDYFKSK-QSTWKDDEDDSEDSDSDDSESSSDDEQSQSPDASDDEEKSSDS 298
Query: 260 IIKDSIHSGVGEEDANGEIVDPGNPSSSSKDV----QQEVLESGRLFVRNLPYTATEDEL 315
D + EE D P SKDV + + E+GR+FVRNLPYTATE+E+
Sbjct: 299 DASDDPDTLEKEE------TDAAEP--ESKDVNAADMEALSETGRIFVRNLPYTATEEEV 350
Query: 316 REHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA 375
E F +FG ++ VHI+VD+ TKRSKG+AYV + IPE +A+E +D SIFQGRL+H++PA
Sbjct: 351 AELFEQFGKLTAVHILVDRSTKRSKGLAYVTFVIPEDGVKAMEAVDGSIFQGRLIHLLPA 410
Query: 376 RHKKSSDKQELH-NSTSQG----TKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVEN 430
+ D T +G + K R+ ERKA +GNTKAWNSLFMR DTV
Sbjct: 411 KRAPQLDSTMGGVGRTGEGEDDKKDSFKTERDAERKAD--AGNTKAWNSLFMRQDTVAAA 468
Query: 431 IARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDG- 489
IA +GV+K++LLD A+DLAVR+ALGE VIA TK+ L AG++ SLE+ +A
Sbjct: 469 IAAHYGVTKAELLDSGADDLAVRMALGEAHVIATTKQQLGEAGIDAESLEQSAASSGAKS 528
Query: 490 ---LKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAA 546
+KRSN V L+KNLPY++ E EL ++ KFG + + ILP T T+A+V FLE EA A
Sbjct: 529 ASRVKRSNCVLLLKNLPYEAEEDELRELCEKFGGVARFILPDTHTIAVVEFLEASEARRA 588
Query: 547 FKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQ------- 599
F GLAYKRY+ VPLYLEWAP ++ +STSK + K + DA L ++
Sbjct: 589 FTGLAYKRYRHVPLYLEWAPENIF--ASTSKVDIKGAKALAVADASSDLAKEARDKTKAK 646
Query: 600 ------LEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKE--GRILSVKVK 651
L G T +D ++ S+FVK L+F T D+ LR HF + G+I++ +V
Sbjct: 647 VDAANDLAGKTVSD------DAVSIFVKGLDFGTTDKKLRSHFAAAAQRVSGQIIAARVV 700
Query: 652 KHL-KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH---AKKDEQVVK 707
H GK +S GFGF+EFD+ A +V LQG+ LDG L L+L ++D+
Sbjct: 701 THRGPGGKMLSRGFGFVEFDTPMVAKSVLTALQGSSLDGKTLKLELSSQGGGERDDDKAG 760
Query: 708 KAEKDKSSTKLLVRNVAFEAQRK 730
K K S+TK++VRNVAFEA ++
Sbjct: 761 KVPKGFSATKIVVRNVAFEATKR 783
>gi|328773827|gb|EGF83864.1| hypothetical protein BATDEDRAFT_8977, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 873
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 281/800 (35%), Positives = 436/800 (54%), Gaps = 95/800 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP +T +RL++ FS+KG++TD KL TKDG R F F+GF+T+++AE A+ Y
Sbjct: 1 SRLIVKNLPYNITPERLKNHFSKKGQVTDVKLATTKDGVFRCFGFVGFKTQEQAESALAY 60
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSL-----------KKEKEVSEDEKNPVLA 109
FNKSY+DT RI E+A+ +GD ++ R WS+++ +KE+E E +P
Sbjct: 61 FNKSYIDTSRIEVEVAKAIGDASLSRGWSKHTPGTSANTQMINRQKEREFRRLEASPQTT 120
Query: 110 AKRGEKKTIEKVT---------------ENDDPQLLEFLQVMQPR--VKSKMWANDTLIG 152
A ++ V+ + +DP+L EFL+VM+PR ++++W ND +I
Sbjct: 121 ANDSTMVDLDPVSKLNSKQKKFLADLQDDPEDPKLKEFLEVMRPRAAAQTRIWGNDDVIA 180
Query: 153 LMADQKAKVSENISQAIKGGEK-------SITLHVKSD---KSNVITDSQATEKS--KNA 200
+ V +++ + G E + H D + V D + ++S K+
Sbjct: 181 AHRNDHEFVKASVT--VPGDEDDELYDELPVINHKDIDIEESATVTEDKEHVDESNIKST 238
Query: 201 AADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSI 260
A D MSDM+Y +S++KK + S + + + N H + + I
Sbjct: 239 AFDSTMSDMEYMRSKMKKPEVEMVKIHPSRLAVLEGTGAVDANDIYNIHTPTA-PRSEPI 297
Query: 261 IKDSIHSGVGEEDAN----GEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELR 316
+ + +ED N I++ P + + ++GR+ VRNL Y + +++
Sbjct: 298 QQVQVVEAESDEDDNSADRSRIIN-SKPIEDELPPAELIADTGRIMVRNLTYLCSPEDIE 356
Query: 317 EHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
E F FG +SEVHI +D++TK+SKG A+++Y +PE+A A LDN+IFQGR++ ++PA+
Sbjct: 357 ELFKPFGPISEVHIPIDRETKKSKGYAFIMYLMPENAVNAYTTLDNTIFQGRIMQIVPAK 416
Query: 377 HK-KSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKH 435
+ K++D+ T G +T K+ RE +RK A+ N WNSLFM DTV E++A+K
Sbjct: 417 ERPKAADE------TLTGPQTFKKNRETQRKG--AASNDFNWNSLFMNADTVAESMAKKL 468
Query: 436 GVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNH 495
V KSD+LD+ +++AVR+AL ET +I ETK + GV++ +L+ RSN
Sbjct: 469 NVRKSDILDKTVDNMAVRLALAETNIINETKAYIEKEGVSIDALKSTQT-------RSNT 521
Query: 496 VFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRY 555
V LVKN+PY + E +L + FGKFG+L ++ILP KT+ALV F E EA AAF+ LAY ++
Sbjct: 522 VILVKNIPYTTEEEDLIETFGKFGTLGRIILPPAKTIALVEFTERNEAKAAFRKLAYSKF 581
Query: 556 KGVPLYLEWAPSDVLSQ-----------------SSTSKGNQKNDA---VVGEHDAKRAL 595
K +PLYL+WA + +Q S G Q N A ++ +
Sbjct: 582 KNIPLYLQWASQGIFTQEFDAEKEAARREARSAAKEISTGYQFNAAGFDSATQNPNVSSK 641
Query: 596 LEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLK 655
+E +LE + D P S+++KNLNF+T +E LR+ FG + R +++K+K K
Sbjct: 642 VEHRLEDLEDDSSAPPVA---SIYIKNLNFQTTEEGLRQAFG-GLSGLRSVNIKMKDDPK 697
Query: 656 NGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDK-- 713
G S+GFGF+ F S E AT + +Q LD H +LQL ++K + E D
Sbjct: 698 TGGKQSLGFGFLGFASTEDATKCLKAMQNFKLDNH--VLQLKYSKPVAPQKRTLEMDDED 755
Query: 714 ---SSTKLLVRNVAFEAQRK 730
TKL+VRNV FEA +K
Sbjct: 756 DTIKGTKLVVRNVPFEASKK 775
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPST-----KTLALVVFLEPVEAAAAFKGLA 551
+V+N+P+++S+ ++ ++F F + V +P+ + A V FL EA A+ L
Sbjct: 763 LVVRNVPFEASKKDIKELFSSFAQVKSVRIPTKYDGQHRGFAFVDFLTKQEAKTAYDTLG 822
Query: 552 YKRYKGVPLYLEWAPSD 568
G L LEWA D
Sbjct: 823 ATHLYGRHLVLEWAQDD 839
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 290 DVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAI 349
D + + ++ +L VRN+P+ A++ +++E FS F V V I D + +G A+V +
Sbjct: 752 DDEDDTIKGTKLVVRNVPFEASKKDIKELFSSFAQVKSVRIPTKYDGQH-RGFAFVDFLT 810
Query: 350 PESASRAIEVLDNSIFQGRLL 370
+ A A + L + GR L
Sbjct: 811 KQEAKTAYDTLGATHLYGRHL 831
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+P ++ +++ FS ++ ++ DG+ R FAF+ F T+QEA+ A
Sbjct: 761 TKLVVRNVPFEASKKDIKELFSSFAQVKSVRIPTKYDGQHRGFAFVDFLTKQEAKTAYDT 820
Query: 61 FNKSYLDTCRISCEIAR 77
++L + E A+
Sbjct: 821 LGATHLYGRHLVLEWAQ 837
>gi|68468570|ref|XP_721604.1| hypothetical protein CaO19.9215 [Candida albicans SC5314]
gi|46443527|gb|EAL02808.1| hypothetical protein CaO19.9215 [Candida albicans SC5314]
Length = 845
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 265/766 (34%), Positives = 427/766 (55%), Gaps = 72/766 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LPKY TE++LR+FFS++G++TD KLM+ ++G+SR+FAFIG+++ AE A+KY
Sbjct: 2 SRLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAK---RGEKKT 117
FNKS++DT RI E A+ DP +P + + K+E++ +DE+ +L + + +K+
Sbjct: 62 FNKSFIDTARIEVEFAKTFSDPTVPLSF-KEKRKREEQKLKDEQERLLEQELRAQAKKQK 120
Query: 118 IEKVTENDD-----PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVS-ENISQAIKG 171
+ +E DD P+L E+++VM+P + K WANDT+ AD S +++ A+ G
Sbjct: 121 TKSTSEIDDEIASNPKLREYMEVMKPSHQVKSWANDTI----ADGSGGPSVQDLENALNG 176
Query: 172 GEKSITLHVKSDKSNVITDSQATEKSKNAAAD------------------ELMSDMDYFK 213
+S DKSN+ + + S + D E+MS D
Sbjct: 177 NNESPV-----DKSNIEVVNTVEDASDDEYNDFKELSNKHGENEDEEEEEEMMSLGDLPT 231
Query: 214 SRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEED 273
+ KD ++S E+ +A ++ D + + NG+ E + + + + V ++
Sbjct: 232 NEENKDKNES-GENLAANENISDLEWLKSRSTRIKENGEVPEIVPEVKEVNEVTEVTQQS 290
Query: 274 ANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD 333
N + P + + Q++ E+GRLF+RN+ Y A+E++ R FS++G + EVHI +D
Sbjct: 291 DNEPELTP------EEQIAQKIEETGRLFIRNISYEASEEDFRSLFSQYGALEEVHIAID 344
Query: 334 KDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTS 391
T +SKG YV + E A+RA LD IFQGRLLH++PA KK D+ +L N
Sbjct: 345 TRTGKSKGFLYVQFLKKEDATRAYRSLDKQIFQGRLLHILPADKKKDHRLDEFDLKNL-- 402
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLA 451
LK++RE ++KA +A+ +WNSL+M D V+E++A K GV+KS L+D E + A
Sbjct: 403 ----PLKKQRELKKKA-QAAKTQFSWNSLYMNSDAVLESVASKLGVTKSQLIDPENSSSA 457
Query: 452 VRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGEL 511
V+ AL E VI + +K + GV+++S D +R + + LVKN P+ ++ E+
Sbjct: 458 VKQALAEAHVIGDVRKYFEDRGVDLTSF--------DKKERDDKIILVKNFPFGTTIDEI 509
Query: 512 AKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS 571
++F +G L ++++P T+A++ F + A AAF LAYKR+K LYLE P D+ +
Sbjct: 510 GELFSAYGQLKRMLMPPAGTIAIIEFRDAPSARAAFSKLAYKRFKSSILYLEKGPKDLFT 569
Query: 572 QSSTSK------GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNF 625
+ T+ Q+N+ V +AK + E E D +I+ + + ++FVKNLNF
Sbjct: 570 REPTTNEVATIPEQQQNEHAV---EAKISANEILGESKEDDEIESVQGPTVAVFVKNLNF 626
Query: 626 KTCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQG 684
T + L F + + + +VK K KN GK +SMGFGF+EF + E A L G
Sbjct: 627 ATTVQALSDLF-KPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANVAISTLDG 685
Query: 685 TILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+LDGH L L+L H + +K S+K++++N+ FEA RK
Sbjct: 686 HVLDGHKLQLKLSHKQGTGTSASSIKKSGKSSKIIIKNLPFEATRK 731
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 622 NLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRD 681
NL F+ ++L + FG G++ SV+V K + GF F+EF+ ++ A
Sbjct: 723 NLPFEATRKDLLELFGAF---GQLKSVRVPKKFDQS---ARGFAFVEFNLMKEAETAMSQ 776
Query: 682 LQGTILDGHALILQLCHAKKD--------EQVVKKAEKDKSSTKLLVRNVA 724
L+G L G L++Q +A++D E++ KK +K ++ L +A
Sbjct: 777 LEGVHLLGRRLVMQ--YAEQDAENAEVEIERMTKKVKKQVATQNLAAARLA 825
>gi|68468327|ref|XP_721723.1| hypothetical protein CaO19.1646 [Candida albicans SC5314]
gi|74680318|sp|Q5AJS6.1|MRD1_CANAL RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|46443655|gb|EAL02935.1| hypothetical protein CaO19.1646 [Candida albicans SC5314]
Length = 841
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 265/766 (34%), Positives = 427/766 (55%), Gaps = 72/766 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LPKY TE++LR+FFS++G++TD KLM+ ++G+SR+FAFIG+++ AE A+KY
Sbjct: 2 SRLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAK---RGEKKT 117
FNKS++DT RI E A+ DP +P + + K+E++ +DE+ +L + + +K+
Sbjct: 62 FNKSFIDTARIEVEFAKTFSDPTVPLSF-KEKRKREEQKLKDEQERLLEQELRAQAKKQK 120
Query: 118 IEKVTENDD-----PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVS-ENISQAIKG 171
+ +E DD P+L E+++VM+P + K WANDT+ AD S +++ A+ G
Sbjct: 121 TKSTSEIDDEIASNPKLREYMEVMKPSHQVKSWANDTI----ADGSGGPSVQDLENALNG 176
Query: 172 GEKSITLHVKSDKSNVITDSQATEKSKNAAAD------------------ELMSDMDYFK 213
+S DKSN+ + + S + D E+MS D
Sbjct: 177 NNESPV-----DKSNIEVVNTVEDASDDEYNDFKELSNKHGENEDEEEEEEMMSLGDLPT 231
Query: 214 SRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEED 273
+ KD ++S E+ +A ++ D + + NG+ E + + + + V ++
Sbjct: 232 NEENKDKNES-GENLAANENISDLEWLKSRSTRIKENGEVPEIVPEVKEVNEVTEVTQQS 290
Query: 274 ANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD 333
N + P + + Q++ E+GRLF+RN+ Y A+E++ R FS++G + EVHI +D
Sbjct: 291 DNEPELTP------EEQIAQKIEETGRLFIRNISYEASEEDFRSLFSQYGALEEVHIAID 344
Query: 334 KDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTS 391
T +SKG YV + E A+RA LD IFQGRLLH++PA KK D+ +L N
Sbjct: 345 TRTGKSKGFLYVQFLKKEDATRAYRSLDKQIFQGRLLHILPADKKKDHRLDEFDLKNL-- 402
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLA 451
LK++RE ++KA +A+ +WNSL+M D V+E++A K GV+KS L+D E + A
Sbjct: 403 ----PLKKQRELKKKA-QAAKTQFSWNSLYMNSDAVLESVASKLGVTKSQLIDPENSSSA 457
Query: 452 VRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGEL 511
V+ AL E VI + +K + GV+++S D +R + + LVKN P+ ++ E+
Sbjct: 458 VKQALAEAHVIGDVRKYFEDRGVDLTSF--------DKKERDDKIILVKNFPFGTTIDEI 509
Query: 512 AKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS 571
++F +G L ++++P T+A++ F + A AAF LAYKR+K LYLE P D+ +
Sbjct: 510 GELFSAYGQLKRMLMPPAGTIAIIEFRDAPSARAAFSKLAYKRFKSSILYLEKGPKDLFT 569
Query: 572 QSSTSK------GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNF 625
+ T+ Q+N+ V +AK + E E D +I+ + + ++FVKNLNF
Sbjct: 570 REPTTNEVATIPEQQQNEHAV---EAKISANEILGESKEDDEIESVQGPTVAVFVKNLNF 626
Query: 626 KTCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQG 684
T + L F + + + +VK K KN GK +SMGFGF+EF + E A L G
Sbjct: 627 ATTVQALSDLF-KPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANVAISTLDG 685
Query: 685 TILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+LDGH L L+L H + +K S+K++++N+ FEA RK
Sbjct: 686 HVLDGHKLQLKLSHKQGTGTSASSIKKSGKSSKIIIKNLPFEATRK 731
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 622 NLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRD 681
NL F+ ++L + FG G++ SV+V K + GF F+EF+ ++ A
Sbjct: 723 NLPFEATRKDLLELFGAF---GQLKSVRVPKKFDQS---ARGFAFVEFNLMKEAETAMSQ 776
Query: 682 LQGTILDGHALILQLCHAKKD--------EQVVKKAEKDKSSTKLLVRNVA 724
L+G L G L++Q +A++D E++ KK +K ++ L +A
Sbjct: 777 LEGVHLLGRRLVMQ--YAEQDPENAEVEIERMTKKVKKQVATQNLAAARLA 825
>gi|238880627|gb|EEQ44265.1| multiple RNA-binding domain-containing protein 1 [Candida albicans
WO-1]
Length = 845
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 265/766 (34%), Positives = 427/766 (55%), Gaps = 72/766 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LPKY TE++LR+FFS++G++TD KLM+ ++G+SR+FAFIG+++ AE A+KY
Sbjct: 2 SRLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAK---RGEKKT 117
FNKS++DT RI E A+ DP +P + + K+E++ +DE+ +L + + +K+
Sbjct: 62 FNKSFIDTARIEVEFAKTFSDPTVPLSF-KEKRKREEQKLKDEQERLLEQELRAQAKKQK 120
Query: 118 IEKVTENDD-----PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVS-ENISQAIKG 171
+ +E DD P+L E+++VM+P + K WANDT+ AD S +++ A+ G
Sbjct: 121 TKSTSEIDDEIASNPKLREYMEVMKPSHQVKSWANDTI----ADGSGGPSVQDLENALNG 176
Query: 172 GEKSITLHVKSDKSNVITDSQATEKSKNAAAD------------------ELMSDMDYFK 213
+S DKSN+ + + S + D E+MS D
Sbjct: 177 NNESPV-----DKSNIEVVNTVEDASDDEYNDFKELSNKHGENEDEEEEEEMMSLGDLPT 231
Query: 214 SRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEED 273
+ KD ++S E+ +A ++ D + + NG+ E + + + + V ++
Sbjct: 232 NEENKDKNES-GENLAANENISDLEWLKSRSTRIKENGEVLEIVPEVKEVNEVTEVTQQS 290
Query: 274 ANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD 333
N + P + + Q++ E+GRLF+RN+ Y A+E++ R FS++G + EVHI +D
Sbjct: 291 DNEPELTP------EEQIAQKIEETGRLFIRNISYEASEEDFRNLFSQYGALEEVHIAID 344
Query: 334 KDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTS 391
T +SKG YV + E A+RA LD IFQGRLLH++PA KK D+ +L N
Sbjct: 345 TRTGKSKGFLYVQFLKKEDATRAYRSLDKQIFQGRLLHILPADKKKDHRLDEFDLKNL-- 402
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLA 451
LK++RE ++KA +A+ +WNSL+M D V+E++A K GV+KS L+D E + A
Sbjct: 403 ----PLKKQRELKKKA-QAAKTQFSWNSLYMNSDAVLESVASKLGVTKSQLIDPENSSSA 457
Query: 452 VRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGEL 511
V+ AL E VI + +K + GV+++S D +R + + LVKN P+ ++ E+
Sbjct: 458 VKQALAEAHVIGDVRKYFEDRGVDLTSF--------DKKERDDKIILVKNFPFGTTIDEI 509
Query: 512 AKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS 571
++F +G L ++++P T+A++ F + A AAF LAYKR+K LYLE P D+ +
Sbjct: 510 GELFSAYGQLKRMLMPPAGTIAIIEFRDAPSARAAFSKLAYKRFKSSILYLEKGPKDLFT 569
Query: 572 QSSTSK------GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNF 625
+ T+ Q+N+ V +AK + E E D +I+ + + ++FVKNLNF
Sbjct: 570 REPTTNEVATIPEQQQNEHAV---EAKISANEILGESKKDDEIESVQGPTVAVFVKNLNF 626
Query: 626 KTCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQG 684
T + L F + + + +VK K KN GK +SMGFGF+EF + E A L G
Sbjct: 627 ATTVQALSDLF-KPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANVAISTLDG 685
Query: 685 TILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+LDGH L L+L H + +K S+K++++N+ FEA RK
Sbjct: 686 HVLDGHKLQLKLSHKQGTGTSASSIKKSGKSSKIIIKNLPFEATRK 731
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 622 NLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRD 681
NL F+ ++L + FG G++ SV+V K + GF F+EF+ ++ A
Sbjct: 723 NLPFEATRKDLLELFGAF---GQLKSVRVPKKFDQS---ARGFAFVEFNLMKEAETAMSQ 776
Query: 682 LQGTILDGHALILQLCHAKKD--------EQVVKKAEKDKSSTKLLVRNVA 724
L+G L G L++Q +A++D E++ KK +K ++ L +A
Sbjct: 777 LEGVHLLGRRLVMQ--YAEQDAENAEVEIERMTKKVKKQVATQNLAAARLA 825
>gi|241952837|ref|XP_002419140.1| multiple RNA-binding domain-containing protein, putative [Candida
dubliniensis CD36]
gi|223642480|emb|CAX42729.1| multiple RNA-binding domain-containing protein, putative [Candida
dubliniensis CD36]
Length = 846
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 268/788 (34%), Positives = 425/788 (53%), Gaps = 115/788 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LPKY TE++LR+FFS++G++TD KLM+ ++G+SR+FAFIG+++ AE A+KY
Sbjct: 2 SRLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGE--KKTI 118
FNKS++DT RI E A+ DP +P + + E+ + ++++ + R + K+ I
Sbjct: 62 FNKSFIDTARIDVEFAKTFSDPTVPLSFKEKRKRDEQRLKDEQERLLEQELRTQVKKQKI 121
Query: 119 EKVTENDD-----PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVS-ENISQAIKGG 172
+ +E DD P+L E+++VM+P + K WANDT+ AD S +++ A+ G
Sbjct: 122 KSTSEIDDEISNNPKLREYMEVMKPSHQVKSWANDTI----ADGSGGPSVQDLENALNGN 177
Query: 173 EKSI----------TLHVKSDKSN------------------------VITDSQATEKSK 198
+ S T+ SD + D A EK+K
Sbjct: 178 KDSSIGKPDIEVVKTMEDASDDEYNDFKELSEKRGENEGEEEEEEMMISLGDLPANEKNK 237
Query: 199 -------NAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNG 251
N AA+E +SD+++ KSR + + E + S EE+E N+
Sbjct: 238 VDNESGENLAANENISDLEWLKSRSTRIKENGELPEISP-----------EEKEVNEDTA 286
Query: 252 DSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTAT 311
+ HS D E+ + + + Q++ E+GRLF+RN+ Y A+
Sbjct: 287 VTQ-----------HS-----DNESEL-------TPEEQIIQKIEETGRLFIRNISYEAS 323
Query: 312 EDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLH 371
E++ R+ FS++G + EVHI +D T +SKG YV ++ + A+RA LD IFQGRLLH
Sbjct: 324 EEDFRKLFSQYGALEEVHIAIDTRTGKSKGFLYVQFSKKDDATRAYRSLDKQIFQGRLLH 383
Query: 372 VMPARHKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVE 429
++PA KK D+ +L N LK++RE ++K S+A+ + +WNSL+M D V+E
Sbjct: 384 ILPADQKKDHRLDEFDLKNL------PLKKQRELKKK-SQAAKSQFSWNSLYMNSDAVLE 436
Query: 430 NIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDG 489
++A K GV+KS L+D E + AV+ AL E VI + +K + GV+++S D
Sbjct: 437 SVASKLGVTKSQLIDPENSSSAVKQALAEAHVIGDVRKYFEDRGVDLTSF--------DK 488
Query: 490 LKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKG 549
+R + + LVKN P+ ++ E+ ++F G L ++++P T+A++ F + A AAF
Sbjct: 489 KERDDKIILVKNFPFGTTIDEIGELFAAHGQLKRMLMPPAGTIAIIEFRDAPSARAAFAK 548
Query: 550 LAYKRYKGVPLYLEWAPSDVLSQSSTSK------GNQKNDAVVGEHDAKRALLEQQLEGV 603
LAYKR+K LYLE P D+ ++ T+ Q+N+ V +AK + E E
Sbjct: 549 LAYKRFKSSILYLEKGPKDLFTREPTTNEIASAPEQQQNEHAV---EAKISANEILGESK 605
Query: 604 TDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSM 662
D DI+ + + ++FVKNLNF T + L F + + + +VK K KN GK +SM
Sbjct: 606 QDDDIESVQGPTVAVFVKNLNFATTVQALSDLF-KPLSGFVVATVKTKPDPKNSGKTLSM 664
Query: 663 GFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRN 722
GFGF+EF + E A L G +LDGH L L+L H + +K S+K++++N
Sbjct: 665 GFGFVEFRTKEQANVAISTLDGHVLDGHKLQLKLSHKQGSGASASSVKKSGKSSKIIIKN 724
Query: 723 VAFEAQRK 730
+ FEA RK
Sbjct: 725 LPFEATRK 732
Score = 39.3 bits (90), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 622 NLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRD 681
NL F+ ++L + FG G++ SV+V K + GF F+EF+ ++ A
Sbjct: 724 NLPFEATRKDLLELFGAF---GQLKSVRVPKKFDQS---ARGFAFVEFNLMKEAETAMNQ 777
Query: 682 LQGTILDGHALILQLC 697
L+G L G L++Q
Sbjct: 778 LEGVHLLGRRLVMQYA 793
>gi|71012413|ref|XP_758493.1| hypothetical protein UM02346.1 [Ustilago maydis 521]
gi|74702789|sp|Q4PC17.1|MRD1_USTMA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|46098151|gb|EAK83384.1| hypothetical protein UM02346.1 [Ustilago maydis 521]
Length = 858
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 263/771 (34%), Positives = 420/771 (54%), Gaps = 80/771 (10%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ V+ LP Y+T+ RLR+ FSQKG +TD KLMR DG SR+F F+G+R+EQEA++A+ Y
Sbjct: 2 SRLIVRGLPSYLTDARLREHFSQKGAVTDVKLMRRPDGTSRKFGFVGYRSEQEAQQALDY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPR--------------PWSRYSLKKEKEVSEDEKNP 106
FN++++DT RIS E+A+K+GD + P S ++ D+ +
Sbjct: 62 FNRTFIDTSRISIELAKKIGDEELVHQREERRNRRNAGAGPEGSASTSDARKRKADKSD- 120
Query: 107 VLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWAND------TLIGLMADQKAK 160
++ E +K + EF+ VMQP+ K K W N+ T+ ++A ++A
Sbjct: 121 ---TQQEEGSGKKKPKKGGAISFEEFMSVMQPKAKRKAWQNEDALPEQTMQDIVAPEEAI 177
Query: 161 VSENISQAIKGGEKSITLHVKSDKSNVITDS--QATEKSKNAAADELMSDMDYFKSRVK- 217
+ +A+K + + ++ + DS + T + AA D ++D +Y + R+K
Sbjct: 178 QKKAARKALKKADAAAAATATAESTAAQPDSGREETPEPDAAANDVGLTDEEYMRLRMKH 237
Query: 218 KDWSDSES-EDDSAGDDDDDDDGEE-----------EEEEENDHNGDSNEECDSIIKDSI 265
+ +D ++ E S+G + + D E+ E E+E H D EC
Sbjct: 238 RVGTDLDTLEQSSSGPEFEQSDNEKDDDDAAADSDPESEDEPIH--DQGFECKQAEMQRK 295
Query: 266 HSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNV 325
E+D ++VD +++ESGRLF+RNLP+ A+ DE+ F FG V
Sbjct: 296 AQQAAEKDQ--KLVD-------------QIMESGRLFIRNLPFAASGDEILAFFESFGTV 340
Query: 326 SEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQE 385
+VHI +DK TK SKG+A+V ++ P A A D S FQGRLLH++PA +K +
Sbjct: 341 KQVHIPLDKQTKASKGLAFVSFSDPAHALAAYRAKDGSTFQGRLLHLLPAVNKDA----- 395
Query: 386 LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDR 445
L + S+ T TLKQ R E++K +A+ + W+ L+M D V +IA + GV+KSD+L+
Sbjct: 396 LAETGSKKTATLKQARAEQKK-QDATKDFN-WSMLYMSSDAVASSIADRLGVNKSDILNP 453
Query: 446 EAN----DLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKN 501
AN + AVR+AL ET++I ETK+ L G+NV + F K RS+ LVKN
Sbjct: 454 GANGGADNAAVRLALAETRIIQETKEFLAQQGINVDA---FQGAKG---PRSDTTILVKN 507
Query: 502 LPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLY 561
+PY +S E+ K+FG+ G +DKV++P + T+A+V EA AF+ +AYKR+KG LY
Sbjct: 508 IPYGTSAEEVEKLFGEHGEVDKVLIPPSGTIAVVEMPVVNEARLAFRAIAYKRFKGGILY 567
Query: 562 LEWAPSDVLSQSSTSKGNQKNDAVVGEH-DAKRALLEQQLEGVTDADIDPDRVESRSLFV 620
LE AP +L+Q + K +VG+ D+ ++ L+G A + V+ +L+V
Sbjct: 568 LEKAPVGLLTQHKVGEKVVKQAPIVGKSIDSSNPSVD--LDGPAGAGAGDEAVDGATLYV 625
Query: 621 KNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVC 679
KNL+F T DE L F + + ++ K + G +SMG+GF+ F S++ A
Sbjct: 626 KNLSFSTTDERLTAFF-HGLSDFAFARIQTKPDPRRPGARLSMGYGFVGFKSIDAARTAQ 684
Query: 680 RDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ + G +LD H L+ + A+++ + + STK+L++N+ FEA ++
Sbjct: 685 KAMDGKVLDAHTLV--VTFARRNAEASTTSISSGGSTKILIKNLPFEATKR 733
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ ++R F +G++ SV++ K N + GFGF+E+ +V A +
Sbjct: 721 ILIKNLPFEATKRDIRDLFSS---QGQLKSVRLPKKFDN---TTRGFGFVEYSTVREAQS 774
Query: 678 VCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTK 717
L+ T L G L+LQ H Q ++ + +S TK
Sbjct: 775 AMEALKHTHLLGRHLVLQWSHLASSTQ--QQVDMQRSKTK 812
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+I +KNLP T+ +RD FS +G++ +L + D +R F F+ + T +EA+ A++
Sbjct: 720 KILIKNLPFEATKRDIRDLFSSQGQLKSVRLPKKFDNTTRGFGFVEYSTVREAQSAMEAL 779
Query: 62 NKSYL 66
++L
Sbjct: 780 KHTHL 784
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R+ FS G + V + D ++G +V Y+ A A+E
Sbjct: 720 KILIKNLPFEATKRDIRDLFSSQGQLKSVRLPKKFDNT-TRGFGFVEYSTVREAQSAMEA 778
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQEL 386
L ++ GR L V+ H SS +Q++
Sbjct: 779 LKHTHLLGRHL-VLQWSHLASSTQQQV 804
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
L+KNLP+++++ ++ +F G L V LP +T+ V + EA +A + L
Sbjct: 721 ILIKNLPFEATKRDIRDLFSSQGQLKSVRLPKKFDNTTRGFGFVEYSTVREAQSAMEALK 780
Query: 552 YKRYKGVPLYLEWA 565
+ G L L+W+
Sbjct: 781 HTHLLGRHLVLQWS 794
>gi|149241847|ref|XP_001526367.1| multiple RNA-binding domain-containing protein 1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146450490|gb|EDK44746.1| multiple RNA-binding domain-containing protein 1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 868
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 279/808 (34%), Positives = 414/808 (51%), Gaps = 129/808 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LPKY TED LR F ++G++TD KL+++K+G+SR+FAFIG+++ + AE+A+K+
Sbjct: 2 SRLIVKGLPKYFTEDNLRKHFGEQGDVTDVKLVKSKNGESRRFAFIGYKSRESAEKAVKF 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMP------RPWSRYSLKKEKEVSEDEKNPVLAAKRGE 114
FNKS+LDT RI EIA+ DPN+P R L++++E ++ KR +
Sbjct: 62 FNKSFLDTARIDVEIAKTFSDPNVPISFREKRKRDNERLRRQEEALIEQNEMAKNVKRQK 121
Query: 115 KKT-IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
K+ IE+ EN DP+ E+++VM+P + K WAND + + AK E+ A+ G
Sbjct: 122 PKSAIEEEMEN-DPKFREYMEVMKPSHEVKSWANDAIADGSGGRSAKELED---ALAGDT 177
Query: 174 KSITLHV------KSDKSNVITDSQATEKSK---------------------------NA 200
K I + +S + D E K N
Sbjct: 178 KPIAQNYDVIEAKESASDDEYEDFSKIEARKGGEEGEEGEEDKEEEMMMMMSLDNVENNL 237
Query: 201 AADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSI 260
A DE +SD+D+ KSR + ++GE E + + NE + +
Sbjct: 238 AKDENVSDLDWLKSRSIR----------------IKENGEVPESALENDSLKQNEGINPL 281
Query: 261 IKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLE----SGRLFVRNLPYTATEDELR 316
V E E++ P + S K +++ LE +GRLF+RN+ Y ATED+ R
Sbjct: 282 T-------VLE---TTEVLVPVS-KSVQKTEEEKTLEKLQDTGRLFIRNILYEATEDDFR 330
Query: 317 EHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
E F +G + EVHI +D T +SKG Y+ + P+ A RA LD IFQGRLLH++ A
Sbjct: 331 ELFLPYGALEEVHIAIDTRTSKSKGFVYIQFVNPQDAVRAYSSLDKEIFQGRLLHILAAD 390
Query: 377 HKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARK 434
KKS D+ +L N LK++RE +RK +A +WNSLFM D V+E++A K
Sbjct: 391 RKKSHRLDEFDLKNL------PLKKQRELKRK-EQAVKTQFSWNSLFMNTDAVMESMAAK 443
Query: 435 HGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSN 494
GV+KS L+D E + AV+ AL E VI + KK + GV+++S + +R +
Sbjct: 444 LGVTKSQLIDPENSSSAVKQALAEAHVIGDVKKFFEDKGVDLTSFNK--------KERDD 495
Query: 495 HVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKR 554
+ LVKN Y ++ EL ++F ++G + ++I+P T+A+V F + A AAF LAYKR
Sbjct: 496 KIILVKNFTYGTTTEELGELFSQYGPIARIIMPPAGTIAIVEFKDAPSARAAFTKLAYKR 555
Query: 555 YKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRA-------------------- 594
+ LYLE P D+ +++ T+ + +G A A
Sbjct: 556 FNSSILYLEKGPKDLFTRAPTTAEEASLNVGIGADTAGTAGVAGVAGNISQPVKAVEVIS 615
Query: 595 ---LLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRIL-SVKV 650
+L Q ++ D DI V S+FVKNLNF T + L F G +L +VK
Sbjct: 616 ANDILGQDIDDTEDGDIHGSTV---SIFVKNLNFSTTVQQLSDLFKPL--SGFVLATVKT 670
Query: 651 KKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK----KDEQ- 704
K KN GK +SMGFGF+EF S A L G +LDGH L L++ H + KD +
Sbjct: 671 KPDPKNTGKTLSMGFGFVEFRSKAQADAAIAALDGHVLDGHKLQLKISHKQSGGAKDSRA 730
Query: 705 --VVKKAEKDKSSTKLLVRNVAFEAQRK 730
V A K S K++++N+ FEA RK
Sbjct: 731 TAVGSAAAKSGKSNKIIIKNLPFEATRK 758
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S + +KNL F+ ++L + FG G + SV+V K + GF FIEF+ ++
Sbjct: 743 SNKIIIKNLPFEATRKDLLELFGAF---GSLKSVRVPKKFDQS---ARGFAFIEFNLLKE 796
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKD------EQVVKKAEK 711
A N L+G L G L++Q D E++ KK +K
Sbjct: 797 AENAMTQLEGVHLLGRRLVMQYAERDADNAEAEIERMTKKVKK 839
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++ ++NLP+ AT +L E F FG++ V V K + ++G A++ + + + A A+
Sbjct: 743 SNKIIIKNLPFEATRKDLLELFGAFGSLKSVR-VPKKFDQSARGFAFIEFNLLKEAENAM 801
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
L+ GR L + A + + E+ T K KQ + A+ +G +K
Sbjct: 802 TQLEGVHLLGRRLVMQYAERDADNAEAEIERMTK---KVKKQVGTQNMAAARLAGKSK 856
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T L + F G + ++ + D +R FAFI F +EAE A+
Sbjct: 744 NKIIIKNLPFEATRKDLLELFGAFGSLKSVRVPKKFDQSARGFAFIEFNLLKEAENAMTQ 803
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEV 99
+L R+ + A + D N R + K +K+V
Sbjct: 804 LEGVHLLGRRLVMQYAERDAD-NAEAEIERMTKKVKKQV 841
>gi|320581887|gb|EFW96106.1| multiple RNA-binding domain-containing protein 1 [Ogataea
parapolymorpha DL-1]
Length = 824
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 256/762 (33%), Positives = 409/762 (53%), Gaps = 82/762 (10%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LP Y TED+L+ F +KG +TD KL+R + G+SR+FAFIG+R++Q+AE A+KY
Sbjct: 2 SRIIVKGLPLYYTEDKLKTHFQKKGVVTDVKLVRNRQGESRRFAFIGYRSQQDAENAVKY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDE----KNPVLAAKRGEKK 116
F+K+++DT RIS + A+ DP +P PW L+ ++++ E E K + KR K
Sbjct: 62 FDKTFIDTARISVQPAKTFSDPTVPLPWREKRLQAKRQLQETEEKLKKLEEIQNKRRNKN 121
Query: 117 T---IEKVTEND---DPQLLEFLQVMQPRVKSKMWANDTLIGLMAD-----QKAKV-SEN 164
T ++ E+ +P+L EFL+V +P V+ K W N+ L+ D Q A + +EN
Sbjct: 122 TKKGVDAFIEDQVSSNPKLQEFLEVSKPSVQQKSWKNEDLVSAQPDNSTDLQSASLATEN 181
Query: 165 IS----QAIKG-------GEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFK 213
S + G EK ITL ++ + +Q K + + E+ D+++FK
Sbjct: 182 ASDDEYEEFNGFQSEEEESEKMITLDEAENRQTQVETAQDDNKEEVKQSAEI-DDLEWFK 240
Query: 214 SRVKKDWSDSESEDDSAGDDDDDDDGE--EEEEEENDHNGDSNEECDSIIKDSIHSGVGE 271
R K+ +GE EE E+ D N ++ + + + + + H E
Sbjct: 241 LRRKR-----------------IKEGEVTEEPEKSQDINKANDIQIEQVGQSAQHQSDDE 283
Query: 272 EDANGEIVDPGNPSSSSKD-VQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHI 330
E+ P + +D Q + ++GRLF+RN+ Y+ATED+ RE F +G++ EVHI
Sbjct: 284 EE----------PQLNEQDKAIQRISQTGRLFLRNILYSATEDDFRELFGTYGSLDEVHI 333
Query: 331 VVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNST 390
VD T SKG AYV + + A +A LD IFQGRLLH++PA KK H T
Sbjct: 334 AVDTRTGNSKGFAYVKFTSADDAVKAYLELDKQIFQGRLLHILPAEAKKD------HTLT 387
Query: 391 SQGTKTLKQRREEE-RKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND 449
L +++ E +K EAS +WNSL+M D V+E++A K G+SK +L+D +
Sbjct: 388 DFDLANLPLKKQRELKKKYEASKAQFSWNSLYMNNDAVLESVASKMGISKGELIDPTNSS 447
Query: 450 LAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEG 509
AV+ AL E VI + +K + GV+++S + +R + V LVKN + +++
Sbjct: 448 SAVKQALAEAHVIGDVRKYFEDKGVDLTSF--------NTKERDDKVILVKNFQHGTTKE 499
Query: 510 ELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDV 569
E+ ++F +G L+++++P T+A+V F + A AAF LA++R LYLE P ++
Sbjct: 500 EIGELFSAYGQLNRLLMPPAGTIAIVEFRDAPAARAAFSKLAFRRLGKSILYLEKGPKNL 559
Query: 570 LSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCD 629
++ ++++ + + D + ++ D +I V S+FVKNLNF T
Sbjct: 560 FTKEASTEELESVSKTESKADTTEIM---DIDNEEDVEISGPTV---SVFVKNLNFSTTT 613
Query: 630 ENLRKHFGEHIKEGRILSVKVKKHLK-NGKNVSMGFGFIEFDSVETATNVCRDLQGTILD 688
L F + + + V+ + K GK SMGFGF+EF + E A N + + G +LD
Sbjct: 614 NELTATF-KSLPGFVVAVVRTRPDPKRTGKTQSMGFGFVEFKTKEQAENAIKIMNGHLLD 672
Query: 689 GHALILQLCH-AKKDEQVVKKAEKDKSSTKLLVRNVAFEAQR 729
GH L L+L + + + A+K K S K++V+N+AFE+ R
Sbjct: 673 GHQLQLKLSNRVSQGKSDTASAKKGKKSPKIIVKNLAFESTR 714
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++ V+NL + +T +++ E FS FGN+ V V K K ++G A+V ++ + A A+
Sbjct: 700 SPKIIVKNLAFESTRNDIFELFSPFGNLKSVR-VPKKFDKSARGFAFVEFSTLKEAESAM 758
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSD-KQELHNSTSQ-----GTKTLKQRRE 402
+ L GR L VM +S D ++E+ T + G + + Q RE
Sbjct: 759 DQLQGVHLLGRRL-VMDFADAESKDVEEEIERMTKKAKFQTGVRKMAQLRE 808
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S + VKNL F++ ++ + F G + SV+V K + GF F+EF +++
Sbjct: 700 SPKIIVKNLAFESTRNDIFELFSPF---GNLKSVRVPKKFDKS---ARGFAFVEFSTLKE 753
Query: 675 ATNVCRDLQGTILDGHALILQLCHAK-KD-----EQVVKKA 709
A + LQG L G L++ A+ KD E++ KKA
Sbjct: 754 AESAMDQLQGVHLLGRRLVMDFADAESKDVEEEIERMTKKA 794
>gi|344301140|gb|EGW31452.1| multiple RNA-binding domain-containing protein 1 [Spathaspora
passalidarum NRRL Y-27907]
Length = 841
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 255/774 (32%), Positives = 422/774 (54%), Gaps = 89/774 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LPKY TED+LR++FS++G++TD KLM+ ++G+SR+FAFIG+++ ++AE+A ++
Sbjct: 2 SRLIVKGLPKYYTEDKLREYFSKQGDVTDVKLMKKRNGESRRFAFIGYKSTEDAEQAARF 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGE--KKTI 118
FN+S++DT RI E+A+ DPN+P + + E + +E+ + R + ++ +
Sbjct: 62 FNRSFIDTARIDVELAKTFSDPNVPLSFKEKRRRDEDRLRMEEERLIEQENRAQMKRQKV 121
Query: 119 EKVTEND-----DPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVS-ENISQAIKGG 172
+ V+E D +P+L E+++VM+P + K WAND++ AD S +++ A+ G
Sbjct: 122 KGVSEIDEEISKNPKLREYMEVMKPSHQVKSWANDSI----ADGSGGPSVKDLEDALNGK 177
Query: 173 EKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGD 232
++ KS V D + ++A +D+ +D + +R ++ + E + S D
Sbjct: 178 NET--------KSTV--DEHEVLQVEDAGSDDEYTDFN--TNRNNEEEEEEEEQMMSLAD 225
Query: 233 DDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGE-EDANGE-------------- 277
+D+ E+ +EEEN + + D + I E ED+N E
Sbjct: 226 LNDEQGKEQTQEEENLAANEDVSDLDWLKSRRIRIKENEQEDSNNEQQEQTEEPSEEPKK 285
Query: 278 ---IVDPGNPSSSSKDVQQEVL-ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD 333
+ P P S ++ E L E+GRLF+RN+ Y +TE++ R F +G + EVHI +D
Sbjct: 286 QPRMQAPVVPQKSPEEQTVEKLQETGRLFIRNILYDSTENDFRNLFEPYGTLEEVHIAID 345
Query: 334 KDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQG 393
T +SKG YV +A PE A RA + LD IFQGRLLH++ + DK++ H +
Sbjct: 346 TRTGKSKGFVYVQFANPEDAVRAYKSLDKQIFQGRLLHIL------AGDKKKDHRLSEFD 399
Query: 394 TKTLKQRREEE-RKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAV 452
K L +++ + +K ++A+ +WNSL+M D V+E++A K G++K+ L+D +++ AV
Sbjct: 400 LKNLPLKKQRDLKKKAQAAKTQFSWNSLYMNNDAVLESVASKLGLTKAQLIDPQSSSSAV 459
Query: 453 RIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELA 512
+ AL E VI + +K + G+++++ D +R + + LVKN P+ ++ EL
Sbjct: 460 KQALAEAHVIGDVRKYFEDRGIDLTTF--------DRKERDDKIILVKNFPFGTTIEELG 511
Query: 513 KMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDV--- 569
+F ++G + ++++P T+A+V F + A AAF LAY+R+K +YLE P D+
Sbjct: 512 NLFSEYGQIKRMLMPPAGTIAIVEFRDAPSARAAFAKLAYRRFKTSIIYLEKGPKDLFLR 571
Query: 570 ------------LSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRS 617
+ QS+ + ++GE A E +EG T A
Sbjct: 572 EPKPEENISVPEIEQSTAVEAKVTAHEILGEEPANN---EDVIEGPTVA----------- 617
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETAT 676
+FVKNLNF T E L F + + I +VK K K G +SMGFGF+EF + E A
Sbjct: 618 IFVKNLNFSTTVEALSALF-KPLPGFVIATVKTKPDPKKPGNTLSMGFGFVEFKTKEFAN 676
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+L G ILDGH L L+L H + A+K S+KL+++N+ FEA RK
Sbjct: 677 AAISNLDGHILDGHKLQLKLSHKQGGSNAAAAAKKSNKSSKLIIKNLPFEATRK 730
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
L +KNL F+ ++L + FG G++ SV+V K + + GF F+EF+ ++ A N
Sbjct: 718 LIIKNLPFEATRKDLLELFGAF---GQLKSVRVPKKFDSS---ARGFAFVEFNLMKEAEN 771
Query: 678 VCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKD-KSSTKLLVRNVA 724
L+G L G L++Q EQ + AE + + TK + R VA
Sbjct: 772 AMNQLEGVHLLGRRLVMQYA-----EQDAEDAEAEIEKMTKKVKRQVA 814
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L ++NLP+ AT +L E F FG + V + D+ ++G A+V + + + A A+ L
Sbjct: 718 LIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDSS-ARGFAFVEFNLMKEAENAMNQL 776
Query: 361 DNSIFQGRLL 370
+ GR L
Sbjct: 777 EGVHLLGRRL 786
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNLP T L + F G++ ++ + D +R FAF+ F +EAE A+
Sbjct: 718 LIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDSSARGFAFVEFNLMKEAENAMNQLE 777
Query: 63 KSYLDTCRISCEIA 76
+L R+ + A
Sbjct: 778 GVHLLGRRLVMQYA 791
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
++KNLP++++ +L ++FG FG L V +P S + A V F EA A L
Sbjct: 718 LIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDSSARGFAFVEFNLMKEAENAMNQLE 777
Query: 552 YKRYKGVPLYLEWAPSD 568
G L +++A D
Sbjct: 778 GVHLLGRRLVMQYAEQD 794
>gi|146422677|ref|XP_001487274.1| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 257/757 (33%), Positives = 408/757 (53%), Gaps = 72/757 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LP Y E +LRD F ++G +TD KLM+ ++G+SR+FAF+G+++ +AE+A KY
Sbjct: 55 SRIIVKGLPSYCDEAKLRDHFLKQGNVTDVKLMKKRNGESRRFAFVGYKSIDDAEKAAKY 114
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPV---LAAKRGEKKT 117
F++S++DT RI E+A+ DP +P + K+ + E E+ + L ++ K
Sbjct: 115 FHQSFMDTARIHVELAKTFSDPTVPLSFREQQRIKQNRLQEQEERLLQQQLFKRQKTKSQ 174
Query: 118 IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSIT 177
I+K EN +P+L EF++VM+P + K WAND + + A ++ + +A++ EK
Sbjct: 175 IDKEIEN-NPKLQEFMEVMRPSHEVKSWANDAVFN---EGGAPSAKELERALEAQEKGDN 230
Query: 178 LHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKK----------DWSDSESED 227
+ VK +K + D TE SK +D+ D F + +D + ED
Sbjct: 231 VSVKPNK---VPDVVHTEGSK---SDDEYDDFPKFDEVEDDEEDEEMIPLNNINDDQRED 284
Query: 228 DS---AGDDDDDDDGEEEEEEENDHNGD------SNEECDSIIKDSIHSGVGEEDANGEI 278
S A + D D + + NGD + EE D+ D+N E+
Sbjct: 285 SSETAANQEMSDLDWLRQRQTRIKENGDKADPAKTTEEPDTA------------DSNIEV 332
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
+ S S +++ ++GRLFVRN+ YT+TE+E R F K+G++ EVHI VD T +
Sbjct: 333 QETKQEESPS----EKIAKTGRLFVRNILYTSTEEEFRTLFQKYGSLEEVHIAVDTRTGK 388
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKT 396
SKG YV + P+ A A + LD IFQGRLLH++PA KK D+ ++ N
Sbjct: 389 SKGFVYVQFKQPKDAVEAYKSLDKQIFQGRLLHILPAEAKKDHRLDEFDIKNL------P 442
Query: 397 LKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIAL 456
LK++R+ ++KA +A+ + +WNSL+M D V+E++A K GVSKSDL+D E++ V+ AL
Sbjct: 443 LKKQRDLKKKA-QAAKSQFSWNSLYMNSDAVLESVAAKMGVSKSDLIDAESSSSGVKQAL 501
Query: 457 GETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFG 516
E VI + +K + GV+++S + +R + + LVKN PY + EL +MFG
Sbjct: 502 AEAHVIGDVRKYFESKGVDLTSFSK--------KERDDKIVLVKNFPYGTGVNELNEMFG 553
Query: 517 KFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTS 576
++G + + ++P T+A++ F + A AAF LAY+++ LYLE P + + +
Sbjct: 554 QYGPIKRTLMPPAGTIAVIEFQDAPSARAAFTKLAYRKFNNSILYLEKGPKGLFIREPVT 613
Query: 577 KGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVE--SRSLFVKNLNFKTCDENLRK 634
+ + E + + L +++ D +E + S+FVKNLNF T L
Sbjct: 614 SEVVEVEKEKVEQGIEPKVTANSL--ISNDAKDETEIEGPTVSVFVKNLNFSTTQPQLAS 671
Query: 635 HFGEHIKEGRILSVKVKKHL-KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALI 693
F E + + +K K K+G +SMGFGF+EF S E A L +LDGH L
Sbjct: 672 VF-EKLPGFALAIIKTKPDPKKSGATLSMGFGFVEFKSKEEAEAAISALNDYVLDGHKLQ 730
Query: 694 LQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
L+L H ++ Q A K + K++++N+ FEA RK
Sbjct: 731 LKLSH-RQGGQSKGGASKTNKTNKIIIKNLPFEATRK 766
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ ++ ++NLP+ AT ++ E F FG + V V K K ++G A+V + + + A A+
Sbjct: 751 TNKIIIKNLPFEATRKDVLELFGAFGQLKSVR-VPKKFDKSARGFAFVEFVLLKEAENAM 809
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSD 382
+ L+ GR L VM K + D
Sbjct: 810 DQLEGVHLLGRRL-VMQYAEKDAED 833
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFK-GLAYKRYK 556
VKNL + +++ +LA +F K I+ + +P ++ A G + +K
Sbjct: 656 FVKNLNFSTTQPQLASVFEKLPGFALAIIKTKP--------DPKKSGATLSMGFGFVEFK 707
Query: 557 GVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESR 616
+ + + + ND V+ H + L +Q G ++
Sbjct: 708 S-------------KEEAEAAISALNDYVLDGHKLQLKLSHRQ--GGQSKGGASKTNKTN 752
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+ +KNL F+ +++ + FG G++ SV+V K + GF F+EF ++ A
Sbjct: 753 KIIIKNLPFEATRKDVLELFGAF---GQLKSVRVPKKFDKS---ARGFAFVEFVLLKEAE 806
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQ--------VVKKAEKDKSSTKLLVRNVAFEAQ 728
N L+G L G L++Q +A+KD + + KK + ++ +L +A + +
Sbjct: 807 NAMDQLEGVHLLGRRLVMQ--YAEKDAEDAEAEIAKMTKKVKNQVATQELAAARLAGKGK 864
Query: 729 RKI 731
R I
Sbjct: 865 RNI 867
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 483 SAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVF 537
S G ++N + ++KNLP++++ ++ ++FG FG L V +P S + A V F
Sbjct: 741 SKGGASKTNKTNKI-IIKNLPFEATRKDVLELFGAFGQLKSVRVPKKFDKSARGFAFVEF 799
Query: 538 LEPVEAAAAFKGLAYKRYKGVPLYLEWAPSD 568
+ EA A L G L +++A D
Sbjct: 800 VLLKEAENAMDQLEGVHLLGRRLVMQYAEKD 830
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T + + F G++ ++ + D +R FAF+ F +EAE A+
Sbjct: 752 NKIIIKNLPFEATRKDVLELFGAFGQLKSVRVPKKFDKSARGFAFVEFVLLKEAENAMDQ 811
Query: 61 FNKSYLDTCRISCEIARK 78
+L R+ + A K
Sbjct: 812 LEGVHLLGRRLVMQYAEK 829
>gi|190344798|gb|EDK36553.2| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 258/757 (34%), Positives = 407/757 (53%), Gaps = 72/757 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LP Y E +LRD FS++G +TD KLM+ ++G+SR+FAF+G+++ +AE+A KY
Sbjct: 55 SRIIVKGLPSYCDEAKLRDHFSKQGNVTDVKLMKKRNGESRRFAFVGYKSIDDAEKAAKY 114
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEK---NPVLAAKRGEKKT 117
F++S++DT RI E+A+ DP +P + K+ + E E+ L ++ K
Sbjct: 115 FHQSFMDTARIHVELAKTFSDPTVPLSFREQQRIKQNRLQEQEERLSQQQLFKRQKTKSQ 174
Query: 118 IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSIT 177
I+K EN +P+L EF++VM+P + K WAND + + A ++ + +A++ EK
Sbjct: 175 IDKEIEN-NPKLQEFMEVMRPSHEVKSWANDAVFN---EGGAPSAKELERALEAQEKGDN 230
Query: 178 LHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKK----------DWSDSESED 227
+ VK +K + D TE SK +D+ D F + +D + ED
Sbjct: 231 VSVKPNK---VPDVVHTEGSK---SDDEYDDFPKFDEVEDDEEDEEMIPLNNINDDQRED 284
Query: 228 DS---AGDDDDDDDGEEEEEEENDHNGD------SNEECDSIIKDSIHSGVGEEDANGEI 278
S A + D D + + NGD + EE D+ D+N E+
Sbjct: 285 SSETAANQEMSDLDWLRQRQTRIKENGDKADPAKTTEEPDTA------------DSNIEV 332
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
+ S S +++ ++GRLFVRN+ YT+TE+E R F K+G++ EVHI VD T +
Sbjct: 333 QETKQEESPS----EKIAKTGRLFVRNILYTSTEEEFRTLFQKYGSLEEVHIAVDTRTGK 388
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKT 396
SKG YV + P+ A A + LD IFQGRLLH++PA KK D+ ++ N
Sbjct: 389 SKGFVYVQFKQPKDAVEAYKSLDKQIFQGRLLHILPAEAKKDHRLDEFDIKNL------P 442
Query: 397 LKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIAL 456
LK++R+ ++KA +A+ + +WNSL+M D V+E++A K GVSKSDL+D E++ V+ AL
Sbjct: 443 LKKQRDLKKKA-QAAKSQFSWNSLYMNSDAVLESVAAKMGVSKSDLIDAESSSSGVKQAL 501
Query: 457 GETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFG 516
E VI + +K + GV+++S + +R + + LVKN PY + EL +MFG
Sbjct: 502 AEAHVIGDVRKYFESKGVDLTSFSK--------KERDDKIVLVKNFPYGTGVNELNEMFG 553
Query: 517 KFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTS 576
++G + + ++P T+A++ F + A AAF LAY+++ LYLE P + + +
Sbjct: 554 QYGPIKRTLMPPAGTIAVIEFQDAPSARAAFTKLAYRKFNNSILYLEKGPKGLFIREPVT 613
Query: 577 KGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVE--SRSLFVKNLNFKTCDENLRK 634
+ + E + + L +++ D +E + S+FVKNLNF T L
Sbjct: 614 SEVVEVEKEKVEQGIEPKVTANSL--ISNDAKDETEIEGPTVSVFVKNLNFSTTQPQLAS 671
Query: 635 HFGEHIKEGRILSVKVKKHL-KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALI 693
F E + +K K K+G +SMGFGF+EF S E A L +LDGH L
Sbjct: 672 VF-EKLPGFASAIIKTKPDPKKSGATLSMGFGFVEFKSKEEAEAAISALNDYVLDGHKLQ 730
Query: 694 LQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
L+L H ++ Q A K + K++++N+ FEA RK
Sbjct: 731 LKLSH-RQGGQSKGGASKTNKTNKIIIKNLPFEATRK 766
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFK-GLAYKRYK 556
VKNL + +++ +LA +F K I+ + +P ++ A G + +K
Sbjct: 656 FVKNLNFSTTQPQLASVFEKLPGFASAIIKTKP--------DPKKSGATLSMGFGFVEFK 707
Query: 557 GVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESR 616
+ + + + ND V+ H + L +Q G ++
Sbjct: 708 S-------------KEEAEAAISALNDYVLDGHKLQLKLSHRQ--GGQSKGGASKTNKTN 752
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+ +KNL F+ +++ + FG G++ SV+V K + GF F+EF ++ A
Sbjct: 753 KIIIKNLPFEATRKDVLELFGAF---GQLKSVRVPKKFDKS---ARGFAFVEFVLLKEAE 806
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQ--------VVKKAEKDKSSTKLLVRNVAFEAQ 728
N L+G L G L++Q +A+KD + + KK + ++ +L +A + +
Sbjct: 807 NAMDQLEGVHLLGRRLVMQ--YAEKDAEDAEAEIAKMTKKVKNQVATQELAAARLAGKGK 864
Query: 729 RKI 731
R I
Sbjct: 865 RNI 867
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ ++ ++NLP+ AT ++ E F FG + V V K K ++G A+V + + + A A+
Sbjct: 751 TNKIIIKNLPFEATRKDVLELFGAFGQLKSVR-VPKKFDKSARGFAFVEFVLLKEAENAM 809
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSD 382
+ L+ GR L VM K + D
Sbjct: 810 DQLEGVHLLGRRL-VMQYAEKDAED 833
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 483 SAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVF 537
S G ++N + ++KNLP++++ ++ ++FG FG L V +P S + A V F
Sbjct: 741 SKGGASKTNKTNKI-IIKNLPFEATRKDVLELFGAFGQLKSVRVPKKFDKSARGFAFVEF 799
Query: 538 LEPVEAAAAFKGLAYKRYKGVPLYLEWAPSD 568
+ EA A L G L +++A D
Sbjct: 800 VLLKEAENAMDQLEGVHLLGRRLVMQYAEKD 830
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T + + F G++ ++ + D +R FAF+ F +EAE A+
Sbjct: 752 NKIIIKNLPFEATRKDVLELFGAFGQLKSVRVPKKFDKSARGFAFVEFVLLKEAENAMDQ 811
Query: 61 FNKSYLDTCRISCEIARK 78
+L R+ + A K
Sbjct: 812 LEGVHLLGRRLVMQYAEK 829
>gi|344232148|gb|EGV64027.1| multiple RNA-binding domain-containing protein 1 [Candida tenuis
ATCC 10573]
Length = 840
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 260/763 (34%), Positives = 422/763 (55%), Gaps = 67/763 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LP+Y+TED+L+ F + G+++D KLM+ ++G+SR+FAFIG+++ +AE A+ Y
Sbjct: 2 SRLIVKGLPQYLTEDKLKSHFDKHGDVSDIKLMKKRNGESRRFAFIGYKSPSDAESAVTY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMP--------RPWSRYSLKKEKEVSEDEKNPVLAAKR 112
FN S++DT RIS E+A+ DP +P + + R +++E+ + ++E+ + +
Sbjct: 62 FNNSFIDTARISVEVAKSFADPTVPMSMKDQRKQQYERLMVREERLLQQEEERKLKKQRI 121
Query: 113 GEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTL--------IGLMADQKAKVSEN 164
K +++ +N PQL EF+Q M+P ++K WAND L + + + AK +N
Sbjct: 122 IRSKVDDQIEKN--PQLKEFVQAMKPSSQTKSWANDDLADGSGGPSVKALEEALAKQDQN 179
Query: 165 ISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSE 224
+ + E VK ++S+ D A + ++ DE+M ++ F + +
Sbjct: 180 -DREVPSFETMSDTKVKENESDAEYDDFAPKGTEVDEDDEVMMPLNTFNKELPEKEMIPN 238
Query: 225 SEDDSAGDDDDDDDGEEE-------EEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGE 277
ED+ A D+ D + E EN E+ DS S
Sbjct: 239 EEDEIAKDEKVTDLEWLQQRRIRMIENRENQIESKPEEKHDSAKAPS---------RTKP 289
Query: 278 IVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTK 337
VDP + ++ Q++ E+GRLF+RN+ YT+TE+E RE F+ +GN+ EVH+ +D T
Sbjct: 290 SVDPEVETHTNH--VQKINETGRLFIRNISYTSTEEEFRELFASYGNLEEVHVAIDTRTG 347
Query: 338 RSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTK 395
+SKG Y+ + PE A +A EVLD IFQGRLLH++PA KK D+ +L N
Sbjct: 348 KSKGFVYIQFTNPEDAVKAYEVLDKEIFQGRLLHILPAEKKKDHRMDEFDLQNL------ 401
Query: 396 TLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIA 455
LK++RE ++KA +A+ +WN+L+M D ++E++A K GV+KS L++ +++D AV+ A
Sbjct: 402 PLKKQRELKKKA-QAAKTQFSWNALYMNQDAILESVAAKMGVAKSQLINAQSSDSAVKQA 460
Query: 456 LGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMF 515
L E VI + +K + GV++ S + +R + V LVKN + ++ EL +MF
Sbjct: 461 LAEAHVIGDVRKYFESKGVDLMSF--------NKKERDDKVILVKNFSFGTTLQELGEMF 512
Query: 516 GKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
++G + ++++P T+A+V F + A +AF LAYKR LYLE P D+ ++ +T
Sbjct: 513 SQYGEVKRMLMPPAGTIAIVEFRDAPSARSAFTKLAYKRSGKSILYLEKGPKDLFTREAT 572
Query: 576 SKG----NQKNDAVVGEHDAKRALLEQ---QLEGVTDADIDPDRVESRSLFVKNLNFKTC 628
+ +++ AV + AK L+E+ Q + A+ D V S+FVKNLNF T
Sbjct: 573 EQEAVEVKEESTAVEAKVSAKDILMEETKPQDDEEVVAETDGPTV---SVFVKNLNFSTT 629
Query: 629 DENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTIL 687
E L K F + + + VK K KN +SMGFGF+EF + E A + G +L
Sbjct: 630 TEQLAKIF-KSLPGFAVALVKTKPDAKNPNSTLSMGFGFVEFRTKEDANKAISLMDGHVL 688
Query: 688 DGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
DGH L L+L + + KK + K STK++++N+ FEA RK
Sbjct: 689 DGHKLQLKLSN-RTGATSGKKTKGGKKSTKIIIKNLPFEATRK 730
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++ + FG G+I S +V K + GF F+EF ++ A N
Sbjct: 718 IIIKNLPFEATRKDIIELFGAF---GQIKSARVPKKFDRS---ARGFAFVEFSLLKEAEN 771
Query: 678 VCRDLQGTILDGHALIL 694
L+G L G L++
Sbjct: 772 AMNQLEGVHLLGRRLVM 788
Score = 39.3 bits (90), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNLP T + + F G+I A++ + D +R FAF+ F +EAE A+
Sbjct: 718 IIIKNLPFEATRKDIIELFGAFGQIKSARVPKKFDRSARGFAFVEFSLLKEAENAMNQLE 777
Query: 63 KSYLDTCRI 71
+L R+
Sbjct: 778 GVHLLGRRL 786
>gi|354545488|emb|CCE42216.1| hypothetical protein CPAR2_807650 [Candida parapsilosis]
Length = 819
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 257/765 (33%), Positives = 413/765 (53%), Gaps = 91/765 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LPKY TED L+ FSQ+G++TD KL+++K+G+SR+FAFIG++++ A++A+K+
Sbjct: 2 SRLIVKGLPKYYTEDNLKKHFSQQGDVTDVKLVKSKNGESRRFAFIGYKSDDAAQKAVKF 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMP------RPWSRYSLKKEKEVSEDEKNPVLAAKRG- 113
FNKS++DT RI ++A+ DP++P R L++++E +E N + A K+
Sbjct: 62 FNKSFIDTSRIDVQLAKSFSDPDVPISFREKRKRENERLRRQEESLIEENNRLNAKKQKV 121
Query: 114 EKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSE-NISQAIKGG 172
E+K++ + DP+ E+++VM+P + K WANDTL AD S ++ +A++G
Sbjct: 122 ERKSLIEAEMESDPKFKEYMEVMKPSYQVKSWANDTL----ADGSGGPSNTDLERALQGD 177
Query: 173 EKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGD 232
+ I V+ K V+ A A E + + F V+ + E+ +
Sbjct: 178 QSDI---VELSKPEVV----------EAPAGESDDEYNDFNGPVENEG----DEEMMPLN 220
Query: 233 DDDDDDGEEEEEEENDHNGD----------SNEECDSIIKDSIHSGVGEEDANGEIVDPG 282
+ D+ + ++EN + D + E S + + S +E + +
Sbjct: 221 EVDETETAPLPQDENVSDFDWLKSRSIRIREDGEVPSNTSEKVESKPEKEYPAHHVAEHK 280
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
+ +KD ++ E+GRLF+RN+ Y ATED+ + F K+G + EVHI VD T +SKG
Sbjct: 281 SEEEKAKD---KIEETGRLFIRNISYEATEDDFKHLFEKYGPLEEVHIAVDTRTGKSKGF 337
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQR 400
Y+ + E A A E LD IFQGRLLH++ A KKS D+ +L N LK++
Sbjct: 338 VYIQFVNTEDAVNAFEALDKQIFQGRLLHILAADQKKSHRLDEFDLKNL------PLKKQ 391
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
RE +++A +AS + +WNSL+M D V+E++A K GV+KS L+D E + AV+ AL E
Sbjct: 392 RELKKRA-QASKSQFSWNSLYMNTDAVMESMAAKLGVTKSQLIDPENSSSAVKQALAEAH 450
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
VI + +K + GV+++S FS + D + V LVKN + ++ +L ++F ++G
Sbjct: 451 VIGDVRKFFEDRGVDLAS---FSKKEKD-----DKVILVKNFSFGTTVEQLGELFSQYGQ 502
Query: 521 LDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQ 580
+ ++I+P + T+A+V F + A AAF LAYKR+ LYLE P D+ ++
Sbjct: 503 IKRIIMPPSGTIAIVEFNDAPSARAAFTKLAYKRFGSSILYLEKGPKDLFTREPV----- 557
Query: 581 KNDAVVGEHDAKRALLEQQLEGVTDADIDPDRV-------------ESRSLFVKNLNFKT 627
E+++ R Q E V +A + + + S+FVKNLNF T
Sbjct: 558 -------ENESIRV---SQSESVVEAKVSASDILGEPEVEEEEIQGPTVSVFVKNLNFST 607
Query: 628 CDENLRKHFGEHIKEGRIL-SVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGT 685
+ L F G +L +VK K KN GK +SMGFGF+EF S+ A L G
Sbjct: 608 TVQQLSDLFKPL--HGFVLATVKTKPDPKNTGKTLSMGFGFVEFKSLAQANAAIATLDGH 665
Query: 686 ILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+LDGH L L++ H + K ++K++++N+ FE RK
Sbjct: 666 VLDGHKLQLKISHKQGSAASSTAPSKSSKTSKIIIKNLPFETSRK 710
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+T +++ + FG G++ SV+V K + GF F+EF+ ++ N
Sbjct: 698 IIIKNLPFETSRKDILELFGAF---GQLKSVRVPKKFDQS---ARGFAFVEFNLLKETEN 751
Query: 678 VCRDLQGTILDGHALILQLCHAKKD--------EQVVKKAEKDKSSTKLLVRNVA 724
+ L+G L G L++Q +A++D E++ KK +K + L +A
Sbjct: 752 AMKQLEGVHLLGRRLVMQ--YAEQDSEDAEAEIEKMTKKVKKQVGTQNLAAARLA 804
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S+I +KNLP + + + F G++ ++ + D +R FAF+ F +E E A+K
Sbjct: 696 SKIIIKNLPFETSRKDILELFGAFGQLKSVRVPKKFDQSARGFAFVEFNLLKETENAMKQ 755
Query: 61 FNKSYLDTCRISCEIA 76
+L R+ + A
Sbjct: 756 LEGVHLLGRRLVMQYA 771
>gi|452823111|gb|EME30124.1| RNA-binding protein [Galdieria sulphuraria]
Length = 713
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 231/707 (32%), Positives = 396/707 (56%), Gaps = 54/707 (7%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ ++ LPKY+ E RL+D FS +GE+TD K++R KDG R+F F+GF+T ++A+ A Y
Sbjct: 7 SRLLIQGLPKYIAEKRLKDIFSSQGEVTDVKVLRKKDGTCRRFGFVGFKTVKQAKAAKDY 66
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
F+++++DT RI E A+ VGD N+PR K++ ++ E+E KR +K E+
Sbjct: 67 FHETFIDTSRIQVEYAKPVGDQNLPR-------KRKPKLVENE-----LPKRYREKEQER 114
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSEN-------ISQAIKGGE 173
DP EFLQVM+PR K +W ND + + + + ++ GGE
Sbjct: 115 -----DPAFQEFLQVMKPRKKKAIWENDWSVDIFGKNNKETNNAGREERRLVASKKPGGE 169
Query: 174 KSI--TLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAG 231
LHV+ D+ + ++S + ++ + + D D S + + + E+D
Sbjct: 170 DVAYEQLHVRFDEEDNSSESSSYQQLEESVPDAQQEDSTSLSSVSSEK-EEEKVENDQQE 228
Query: 232 DDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDV 291
+ +D++ E + + + ++ D +++ I + D E N S+
Sbjct: 229 EYSNDEEWLESKLSKPIIPIEPMKKNDEMVEKEI-TLTENNDTKSENFSVENTKDSTNSN 287
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
VLE+GRLFVRNL Y+ T++EL + F K+G +S+VH+ +D +T+++KG A++ + +PE
Sbjct: 288 SSNVLETGRLFVRNLAYSVTDEELTKLFEKYGLLSDVHVCIDSETQKAKGFAFITFVLPE 347
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
+A++A+ LD IFQGRLLH++PA ++++ ++ + K K + ++++
Sbjct: 348 NAAQAMAELDGHIFQGRLLHILPAMAPIRNEQERKTSNLYKDEKLAKMK-----QSAKLG 402
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD--REANDLAVRIALGETQVIAETKKAL 469
+ +AW+SL+M D V ++IA+ VSKS + + +++ AV++A+GE + ET++
Sbjct: 403 TDRQAWSSLYMSTDAVADSIAQNFQVSKSQVYENLQDSGTAAVQLAIGEAHLQEETRQLF 462
Query: 470 TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST 529
+AGVNV +L + G RS V LVKNLP + E E+ +F KFG+L +VI+ +
Sbjct: 463 QSAGVNVDALNDSKDGP-----RSKTVILVKNLPATTLEKEVVDLFMKFGALRQVIMAPS 517
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH 589
+ LV F+E +A A++ LAY ++K PLYLEWA D+ +S
Sbjct: 518 CLIGLVEFIEANDAKRAYRALAYSKFKDRPLYLEWASQDIFLMKPSS------------- 564
Query: 590 DAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVK 649
D+ ++E++ E + + DR+ SLFVKNL+F T ++ LR+ F E + R +++
Sbjct: 565 DSNVMMIEEKQEEDEPSSNNLDRIGRTSLFVKNLDFNTTEDQLRRVF-EKVAPVRSVTIA 623
Query: 650 VKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL 696
K + VS+GFGF+E+ + + A LQGT++DGHA++L+L
Sbjct: 624 KKNKISASAPVSLGFGFVEYATEKDAQRALNQLQGTVIDGHAVVLKL 670
>gi|294656916|ref|XP_002770331.1| DEHA2D17358p [Debaryomyces hansenii CBS767]
gi|199431836|emb|CAR65685.1| DEHA2D17358p [Debaryomyces hansenii CBS767]
Length = 842
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 256/773 (33%), Positives = 410/773 (53%), Gaps = 89/773 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LPKY TE +LR+ FS+KG++TD KLM+ ++G+SR+FAFIG+++ ++AE++ ++
Sbjct: 2 SRLIVKGLPKYFTEQKLREHFSKKGDVTDVKLMKKRNGESRRFAFIGYKSFEDAEKSARF 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKK---- 116
F+KS++DT RI E+A+ DP++P + ++++ E E V +R KK
Sbjct: 62 FDKSFIDTARIDVELAKTFSDPSVPLSFKEKRRLNDEKLREQEARLVEEQERKNKKQRTN 121
Query: 117 --TIEKVTENDDPQLLEFLQVMQPRVKSKMWAN-DTLIGL-------MADQKAKV----- 161
TI++ EN+ P+L EF++VM+P + K WAN D G +AD+ A+
Sbjct: 122 KSTIDEEIENN-PKLREFMEVMKPSHQVKSWANFDVADGTGAPSTQALADELARQDGNEL 180
Query: 162 -----SENISQAIKGGEKSITLHVKSDKSN------------VITDSQATEKSKNAAADE 204
N+ QA +G K +N +I+ S E+ A DE
Sbjct: 181 STESNKPNVLQAPEGESDDEYEDFKPTDANKGEVEEEEEEEKMISLSDLPEEENKLANDE 240
Query: 205 LMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDS 264
++D+D+ K R ++ + +ED A +++ KD
Sbjct: 241 NVTDLDWLKLRRRRMKDNEPAEDPQA--------------------------REAVSKDE 274
Query: 265 IHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGN 324
I E + +P S + ++ E+GRLFVRN+ YT+TE E RE F +G
Sbjct: 275 IIPAEVERLPERYLEEPQQ--SPEEITIAKISETGRLFVRNILYTSTEQEFRELFETYGP 332
Query: 325 VSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--D 382
+ EVH+ +D T +SKG Y+ + E+A A LD IFQGRLLH++PA KK D
Sbjct: 333 LEEVHVAIDTRTGKSKGFVYIQFFKSENAVSAYHALDKQIFQGRLLHILPAEKKKDHRLD 392
Query: 383 KQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDL 442
+ +L N LK++RE +RK AS +WNSL+M D V++++A K GVSKS L
Sbjct: 393 EFDLKNL------PLKKQRELKRK-DHASKTQFSWNSLYMNSDAVLDSVAAKMGVSKSQL 445
Query: 443 LDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNL 502
+D ++++ AV+ AL E VI + +K N GV++++ D +R + V LVKN
Sbjct: 446 IDAQSSNSAVKQALAEAHVIGDVRKYFENKGVDLTTF--------DKKERDDKVILVKNF 497
Query: 503 PYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYL 562
PY ++ E+ ++F ++G L ++++P T+A+V F + A AAF+ LAY+R+ +YL
Sbjct: 498 PYGTTIEEIGELFSEYGQLKRMLMPPAGTIAIVEFRDAPSARAAFQKLAYRRFGKSIIYL 557
Query: 563 EWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVE--SRSLFV 620
E P D+ ++ +S N + E + + + G + + D D ++ + S+FV
Sbjct: 558 EKGPKDLFTREPSSDENNEISEKPDEKAVEVKVTANDIMGESKVEEDEDTIDGPTVSIFV 617
Query: 621 KNLNFKTCDENLRKHFGEHIKEGRILS--VKVKKHLKNGKNVSMGFGFIEFDSVETATNV 678
KNLNF T + L + F G I++ K+G +SMGFGF+EF + E A
Sbjct: 618 KNLNFATTSQRLTEAF--QALPGFIVAKVKVKPDPKKSGSTLSMGFGFVEFRTKEQANVA 675
Query: 679 CRDLQGTILDGHALILQLCHAK-KDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ +LDGH L L+L H + K+EK S K++++N+ FEA RK
Sbjct: 676 ISTMNDYVLDGHKLQLKLSHRQSGSTSTSSKSEKSNKSNKIIIKNLPFEATRK 728
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 582 NDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIK 641
ND V+ H + L +Q + + +S + +KNL F+ +++ + FG
Sbjct: 680 NDYVLDGHKLQLKLSHRQSGSTSTSSKSEKSNKSNKIIIKNLPFEATRKDVLELFGAF-- 737
Query: 642 EGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
G++ SV+V K + GF F+EF ++ A N L+G L G L++Q
Sbjct: 738 -GQLKSVRVPKKFDKS---ARGFAFVEFSLLKEAENAMNQLEGVHLLGRRLVMQYA 789
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ ++NLP+ AT ++ E F FG + V V K K ++G A+V +++ + A A+ L
Sbjct: 716 IIIKNLPFEATRKDVLELFGAFGQLKSVR-VPKKFDKSARGFAFVEFSLLKEAENAMNQL 774
Query: 361 DNSIFQGRLL 370
+ GR L
Sbjct: 775 EGVHLLGRRL 784
>gi|406607411|emb|CCH41202.1| Multiple RNA-binding domain-containing protein 1 [Wickerhamomyces
ciferrii]
Length = 861
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 260/800 (32%), Positives = 427/800 (53%), Gaps = 122/800 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LPKY+ E++LRD F++KG+ITD KL + + G+SR+FAFIGF+ +++AEEA++Y
Sbjct: 2 SRLIVKGLPKYLDEEKLRDHFAKKGDITDVKLRKNRAGESRRFAFIGFKRQEDAEEAVRY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRY------SLKKEKEVSEDEKNPVLAAKRGE 114
FN S++DT +I IA+ DP++P+ + +K+ + ++ + +R +
Sbjct: 62 FNGSFIDTAKIEVSIAKSFVDPSVPKSFKEKRREAFDRIKQREREEQEREEAAKEQERRK 121
Query: 115 KKTIEKVTEND-----DPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAI 169
++ I+K ++ D DP+L EF++ M+P ++K W+ND ++
Sbjct: 122 RQKIDKKSKIDQDIENDPKLKEFIESMKPSTQAKSWSNDVVVN----------------- 164
Query: 170 KGGEKSIT-----LHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSE 224
+GG S + L +K D SN K +N ADE+ +V+++ SD E
Sbjct: 165 EGGAPSNSLLDKVLAMKGDGSN----DDNNNKFENKFADEIF--------KVQENESDDE 212
Query: 225 SE---------------------DDSAGDDDDDDDGEEEEEEENDHN---------GDSN 254
+ DD D+ + +D E +EE+ +D ++
Sbjct: 213 YDAFGKTKQDQEEQEDDEPMMDLDDFGKDEGEIEDKENQEEDISDMEWLKRRRVRIKENG 272
Query: 255 EECDSIIKDSI---HSGVGEEDANGEIVDPGNPSSSSKDVQQ-----------EVLESGR 300
E D +SI + EE+ + + SSSK+ ++ ++ +GR
Sbjct: 273 EVVDKPKTNSIEPQNDDQKEEEVEQKNSEKAAEKSSSKEPEELKPSEEETIINKIRTTGR 332
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LF+RNL Y++ E+E RE FSK+G + EVHI +D T +SKG AY+ + P+ A +A
Sbjct: 333 LFLRNLLYSSKEEEFRELFSKYGELEEVHIAIDTRTGQSKGFAYIQFVNPDDAVQAYIEQ 392
Query: 361 DNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWN 418
D IFQGRLLH++P KK+ D+ +L N LK++RE ++K ++AS +T +WN
Sbjct: 393 DKQIFQGRLLHILPGDSKKNHRLDEFDLKNL------PLKKQRELKKK-NDASKHTFSWN 445
Query: 419 SLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSS 478
SL+M D V+ +IA G+ K DL+D E+++ AV+ AL E VI + +K N G++++
Sbjct: 446 SLYMNNDAVLNSIASSMGLQKRDLIDPESSNSAVKQALAEAHVIGDVRKFFENKGIDLTK 505
Query: 479 LEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFL 538
++ +R + + L+KN P+ ++E EL ++F FG + ++I+P + T+A++ F
Sbjct: 506 FQD--------KERDDSIILIKNFPFGTTEAELLELFTPFGPVKRIIMPPSGTIAIIQFR 557
Query: 539 EPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGE-----HDAKR 593
+ +AF L Y+R+K LYLE P D+ ++ S N E D R
Sbjct: 558 DLPSGRSAFTKLCYRRFKKGILYLEKGPKDLFTREPESDEIANNSETPKEDVKEVKDNAR 617
Query: 594 ALLE-QQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK 652
++E +Q++ D P + S+FVKNLNF T L F E + + ++K K
Sbjct: 618 DIMEDEQVQEDEDIFEGP----TVSIFVKNLNFNTTSSQLTSVF-EKLTGFVVATIKTKP 672
Query: 653 HLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEK 711
++ K SMGFGF+EF + E A L T+LDGH L L+L H + VVKK
Sbjct: 673 DPRDSSKTQSMGFGFVEFKTKEQANIAISTLDNTVLDGHKLQLKLSHR---QNVVKKTST 729
Query: 712 DKS-STKLLVRNVAFEAQRK 730
+K+ S+K++V+N+ FEA RK
Sbjct: 730 NKAVSSKIIVKNLPFEASRK 749
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++ V+NLP+ A+ ++ E F+ FG + V V K K ++G A+V + IP+ A A+
Sbjct: 734 SSKIIVKNLPFEASRKDVFELFNSFGQLKSVR-VPKKFDKSARGFAFVEFLIPKEAQSAM 792
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSD 382
+ L GR L VM + S D
Sbjct: 793 DQLQGVHLLGRRL-VMQYAEQGSDD 816
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
+VKNLP+++S ++ ++F FG L V +P S + A V FL P EA +A L
Sbjct: 738 IVKNLPFEASRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLIPKEAQSAMDQLQG 797
Query: 553 KRYKGVPLYLEWA 565
G L +++A
Sbjct: 798 VHLLGRRLVMQYA 810
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S + VKNL F+ +++ + F G++ SV+V K + GF F+EF +
Sbjct: 734 SSKIIVKNLPFEASRKDVFELFNSF---GQLKSVRVPKKFDKS---ARGFAFVEFLIPKE 787
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKD------EQVVKKAEKDKSSTKL 718
A + LQG L G L++Q D E++ KK +K ++ +L
Sbjct: 788 AQSAMDQLQGVHLLGRRLVMQYAEQGSDDVEAEIEKMTKKVKKQVATQQL 837
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S+I VKNLP + + + F+ G++ ++ + D +R FAF+ F +EA+ A+
Sbjct: 735 SKIIVKNLPFEASRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLIPKEAQSAMDQ 794
Query: 61 FNKSYLDTCRISCEIARKVGD 81
+L R+ + A + D
Sbjct: 795 LQGVHLLGRRLVMQYAEQGSD 815
>gi|390596289|gb|EIN05691.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 779
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 248/737 (33%), Positives = 387/737 (52%), Gaps = 71/737 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE----ITDAKLMRTKDGKSRQFAFIGFRTEQEAEE 56
SR+ VKN+P YVT DRLR++F QKG ITDAK+ + DG SR+F FIGF+T+ EA
Sbjct: 2 SRLIVKNIPSYVTPDRLREYFQQKGAPSGTITDAKVAQKSDGTSRRFGFIGFKTDAEAAA 61
Query: 57 AIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKK 116
A +F++++LD+ RI+ +I + D PRP R L D + EK+
Sbjct: 62 ARDWFDRTFLDSSRIAVQIVQGAKDAPAPRPSKRPRLGPSP-AERDTPQASSSTHVKEKE 120
Query: 117 TIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSI 176
K D QL EF++ M+PR K + WAN+ + + S++ +
Sbjct: 121 QAMKTKNKKDQQLEEFMETMKPRKKGRTWANEEPSPSAQPDALRHPDKKSRSTSKNPEGA 180
Query: 177 TLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDD 236
+ D + Q +N MSDMD+ K + K + E+E
Sbjct: 181 SPDRNVDPTGADDGDQ-----ENVG----MSDMDWLKKHMSKRVEEVEAEKAF------- 224
Query: 237 DDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVL 296
E+ +EE++ D N+E D ++P +P+ ++ +L
Sbjct: 225 ---EQSDEEDSMDTQDRNKEADQAP-----------------LEPEDPT------RRTIL 258
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E+ RLF+RNL +T TE +L EHF +FG +S+VHI +D TK+SKG+AY+ +A + A A
Sbjct: 259 ETSRLFLRNLAFTCTEADLEEHFRRFGAISQVHIPLDHATKQSKGLAYIKFAKAQDAVDA 318
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA 416
+ LD + FQGRLLH++PA +K E+ ++ + KT+KQ + +RKA G
Sbjct: 319 YDALDKTSFQGRLLHILPAVERKPP--PEVQDADGK-KKTVKQEKAAQRKAMAGKGFN-- 373
Query: 417 WNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNV 476
W+ L+M D VV +IA + VSK+D+L+ E+++ AV++AL ET VI+ETK L + GV++
Sbjct: 374 WSMLYMNSDAVVSSIADRMNVSKADILNPESDNAAVKMALAETHVISETKAYLESQGVDL 433
Query: 477 SSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVV 536
+S + + RS+ + LVKN+PY +S ++ +F G L +V++P T+A+V
Sbjct: 434 ASFAQPA--------RSDTIILVKNIPYGTSADDIRALFEPHGDLTRVLVPPAGTMAVVE 485
Query: 537 FLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALL 596
F +P E AFK +AY+R +YLE P + + S+ + N A+ E +
Sbjct: 486 FAQPDETRKAFKAVAYRRMGNSIIYLERGPEGMFTGKVPSE-EEANGALAKEP----VRI 540
Query: 597 EQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKN 656
E+ E ++ +LFVKNL F T E L + H+ V+ K KN
Sbjct: 541 EEPEEDAAGEEL--SLAAGTTLFVKNLAFSTTSERLTQLL-RHLPSFAFARVQTKPDPKN 597
Query: 657 GKN-VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS- 714
+SMG+GF+ F E+A + LQGT++DGHAL ++ +DE+ K+ E
Sbjct: 598 PNGRLSMGYGFVGFKDKESAKKGMKSLQGTVVDGHALSVKWAGRGQDEKEGKEGEGKAKA 657
Query: 715 -STKLLVRNVAFEAQRK 730
+TK++V+NV FEA +K
Sbjct: 658 RTTKMIVKNVPFEATKK 674
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P T+ +R+ F G++ +L + D +SR FAF+ F + EAE A +
Sbjct: 660 TKMIVKNVPFEATKKDIRELFGAHGQLKSVRLPKKFDHRSRGFAFLDFVSRHEAENAYEA 719
Query: 61 FNKSYLDTCRISCEIA 76
++L + E A
Sbjct: 720 LKHTHLLGRHLVLEWA 735
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLA 551
+VKN+P+++++ ++ ++FG G L V LP ++ A + F+ EA A++ L
Sbjct: 662 MIVKNVPFEATKKDIRELFGAHGQLKSVRLPKKFDHRSRGFAFLDFVSRHEAENAYEALK 721
Query: 552 YKRYKGVPLYLEWA 565
+ G L LEWA
Sbjct: 722 HTHLLGRHLVLEWA 735
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ VKN+ F+ +++R+ FG H G++ SV++ K + S GF F++F S A N
Sbjct: 662 MIVKNVPFEATKKDIRELFGAH---GQLKSVRLPKKFDH---RSRGFAFLDFVSRHEAEN 715
Query: 678 VCRDLQGTILDGHALILQLC 697
L+ T L G L+L+
Sbjct: 716 AYEALKHTHLLGRHLVLEWA 735
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ V+N+P+ AT+ ++RE F G + V + D RS+G A++ + A A E
Sbjct: 661 KMIVKNVPFEATKKDIRELFGAHGQLKSVRLPKKFD-HRSRGFAFLDFVSRHEAENAYEA 719
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 720 LKHTHLLGRHL 730
>gi|448521115|ref|XP_003868429.1| hypothetical protein CORT_0C01480 [Candida orthopsilosis Co 90-125]
gi|380352769|emb|CCG25525.1| hypothetical protein CORT_0C01480 [Candida orthopsilosis]
Length = 819
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 253/773 (32%), Positives = 408/773 (52%), Gaps = 107/773 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LPKY TE+ L+ FSQ+G++TD KL+++K+G+SR+FAFIG+++++ AE+A+K+
Sbjct: 2 SRLIVKGLPKYYTEENLKKHFSQQGDVTDVKLVKSKNGESRRFAFIGYKSDESAEKAVKF 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPV----------LAA 110
FNKS++DT RI ++A+ DP++P S K++++ + L A
Sbjct: 62 FNKSFIDTSRIDVQLAKSFSDPDVP-----LSFKEKRKRENERLRREEELLIEENNRLKA 116
Query: 111 K--RGEKKT-IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSE-NIS 166
K R E+K+ IE+ EN DP+ E+++VM+P + K WANDT+ AD S ++
Sbjct: 117 KKQRTERKSLIEEEMEN-DPKFKEYMEVMKPSHQVKSWANDTI----ADGSGGPSNADLE 171
Query: 167 QAIKGGEKSITLHVKS-----------DKSN---------------VITDSQATEKSKNA 200
+A++GG+ + K D+ N ++ ++ ++
Sbjct: 172 RALEGGKSNAAEVSKPEVAEAQEQESDDEYNDFNGSVDNEDEEEEMMLLNAVDENETGTL 231
Query: 201 AADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSI 260
A DE +SD+D+ KSR + D E ++ + EN +
Sbjct: 232 AKDENVSDLDWLKSRSIRIKEDGEFPENVS---------------ENQTTTQEEHPVSPV 276
Query: 261 IKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFS 320
++ EED ++ + E+GRLF+RN+ Y ATED+ R F
Sbjct: 277 VEHK-----SEEDK----------------IRDRIEETGRLFIRNISYDATEDDFRHLFE 315
Query: 321 KFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKS 380
+G + EVHI VD T +SKG Y+ + E A A E LD IFQGRLLH++ A KKS
Sbjct: 316 SYGPLEEVHIAVDTRTNKSKGFVYIQFVNTEDAVNAFESLDKQIFQGRLLHILAADKKKS 375
Query: 381 S--DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVS 438
D+ +L N LK++RE ++KA +AS N +WNSL+M D V+E++A K GV+
Sbjct: 376 HRLDEFDLKNL------PLKKQRELKKKA-QASKNQFSWNSLYMNTDAVMESMAAKLGVT 428
Query: 439 KSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFL 498
KS L++ E + AV+ AL E VI + +K GV+++S + ++ + V L
Sbjct: 429 KSQLINPENSSSAVKQALAEAHVIGDVRKFFEERGVDLASF--------NKKEKDDKVIL 480
Query: 499 VKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGV 558
VKN + ++ EL ++F ++G L ++I+P + T+A++ F + A AAF LAYKR+
Sbjct: 481 VKNFSFGTTVEELGELFSQYGKLKRIIMPPSGTIAIIEFNDAPSARAAFTKLAYKRFGSS 540
Query: 559 PLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSL 618
LYLE P D+ ++ N+ + E + + + G + + + + S+
Sbjct: 541 ILYLEKGPKDLFTREPVE--NENVELSEPEKVVEAKVSASDILGEPEVEEEEIEGPTVSV 598
Query: 619 FVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATN 677
FVKNLNF T + L F + + + +VK K K+ GK +SMGFGF+EF S+ A
Sbjct: 599 FVKNLNFSTTVQQLSNLF-KSLPGFVLATVKTKPDPKDAGKILSMGFGFVEFKSLAQANA 657
Query: 678 VCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
L G +LDGH L L++ H + K ++K++++N+ FEA RK
Sbjct: 658 AIATLDGHVLDGHKLQLKISHKQGTATSATAPSKSAKTSKIIIKNLPFEASRK 710
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 31/202 (15%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFK-GLAYKRYK 556
VKNL + ++ +L+ +F SL +L + KT +P +A G + +K
Sbjct: 599 FVKNLNFSTTVQQLSNLFK---SLPGFVLATVKTKP-----DPKDAGKILSMGFGFVEFK 650
Query: 557 GVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR-VES 615
L+Q++ + + G H + + +Q G + P + ++
Sbjct: 651 S------------LAQANAAIATLDGHVLDG-HKLQLKISHKQ--GTATSATAPSKSAKT 695
Query: 616 RSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETA 675
+ +KNL F+ ++L + FG G++ SV+V K + GF F+EF+ ++ A
Sbjct: 696 SKIIIKNLPFEASRKDLLELFGAF---GQLKSVRVPKKFDQS---ARGFAFVEFNLLKEA 749
Query: 676 TNVCRDLQGTILDGHALILQLC 697
+ + L+G L G L++Q
Sbjct: 750 EDAMKQLEGVHLLGRRLVMQYA 771
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S+I +KNLP + L + F G++ ++ + D +R FAF+ F +EAE+A+K
Sbjct: 696 SKIIIKNLPFEASRKDLLELFGAFGQLKSVRVPKKFDQSARGFAFVEFNLLKEAEDAMKQ 755
Query: 61 FNKSYLDTCRISCEIA 76
+L R+ + A
Sbjct: 756 LEGVHLLGRRLVMQYA 771
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
++KNLP+++S +L ++FG FG L V +P S + A V F EA A K L
Sbjct: 699 IIKNLPFEASRKDLLELFGAFGQLKSVRVPKKFDQSARGFAFVEFNLLKEAEDAMKQLEG 758
Query: 553 KRYKGVPLYLEWAPSD 568
G L +++A D
Sbjct: 759 VHLLGRRLVMQYAEQD 774
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
PS S+K + ++ ++NLP+ A+ +L E F FG + V V K + ++G A
Sbjct: 689 PSKSAK--------TSKIIIKNLPFEASRKDLLELFGAFGQLKSVR-VPKKFDQSARGFA 739
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ-----GTKTLK 398
+V + + + A A++ L+ GR L + A + E+ T + GT+ L
Sbjct: 740 FVEFNLLKEAEDAMKQLEGVHLLGRRLVMQYAEQDSEDAEAEIERMTKKVKRQVGTQNLA 799
Query: 399 QRR 401
R
Sbjct: 800 AAR 802
>gi|126275158|ref|XP_001386803.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126212672|gb|EAZ62780.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 838
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 261/775 (33%), Positives = 418/775 (53%), Gaps = 94/775 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LPKY TED+LR+FF ++G++TD KLM+ ++G+SR+FAF+G+++ ++AE+A +
Sbjct: 2 SRLIVKGLPKYYTEDKLREFFGKQGDVTDVKLMKKRNGESRRFAFVGYKSFEDAEKAASF 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNKS++DT RI E+A+ DPN+P + + E+ + E E+ + ++ +K+
Sbjct: 62 FNKSFIDTARIDVELAKTFSDPNVPMSFKDRKRQNEERLREQEERLLQQEQQQKKRRKNV 121
Query: 121 VTEND----DPQLLEFLQVMQPRVKSKMWANDTLI------------GLMADQKAKVSEN 164
T +D DP+L EF++VM+P + K WAND+ +A Q + + E
Sbjct: 122 NTIDDEIAADPKLREFMEVMKPSHQVKSWANDSTADGSGAPSAAALEEALAKQDSGIKEE 181
Query: 165 ISQAIKGGEK-------------SITLHVKSDKSNVIT-------DSQA-TEKSKNAAAD 203
+SQ + + + H + D+ +++ +++A E++ + AAD
Sbjct: 182 LSQKYEVKQAREVESDDEYDDFVANRKHSEDDEEEMMSLDNLKKPEAEADVEETADIAAD 241
Query: 204 ELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKD 263
E +SD+D+ KSR + D+E E + ++ E EE H + + I++
Sbjct: 242 ENVSDLDWLKSR-RIRIRDNEEEKKEESVGEVVEETAESEE----HRARPRRQVE--IEE 294
Query: 264 SIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFG 323
S+ EE +I +GRLF+RN+ YT+TE E R+ F ++G
Sbjct: 295 SL-----EEVTAAKIA-----------------VTGRLFIRNILYTSTEAEFRDLFEQYG 332
Query: 324 NVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS-- 381
+ EVHI VD T +SKG YV + A +A E LD IFQGRLLH++P KK
Sbjct: 333 PLQEVHIAVDTRTGKSKGFVYVQFENSSDAVQAYEALDKQIFQGRLLHILPGEKKKDHRL 392
Query: 382 DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSD 441
D+ ++ N LK++RE ++K S+AS + +WNSL+M D V++++A K GVSKS
Sbjct: 393 DEFDIKNL------PLKKQRELKKK-SQASKSQFSWNSLYMNTDAVLDSVAAKMGVSKSQ 445
Query: 442 LLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKN 501
L+D + + AV+ AL E VI + +K + GV++++ D +R + V LVKN
Sbjct: 446 LIDPQNSSSAVKQALAEAHVIGDVRKYFEDRGVDLTTF--------DRKERDDKVILVKN 497
Query: 502 LPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLY 561
PY ++ E+ +MF ++GSL ++++P T+A+V F + A AAF LAY+R+K +Y
Sbjct: 498 FPYGTTIEEIGEMFTQYGSLKRMLMPPAGTIAIVEFRDAPAARAAFTKLAYRRFKKSIIY 557
Query: 562 LEWAPSDVLSQ-----SSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESR 616
LE P D+ ++ + K Q +AV + A L E +I+ V
Sbjct: 558 LEKGPKDLFTREPSVHETVDKQEQIENAVEVKVTASDVLGESSKNEQEQNEIEGPTV--- 614
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETA 675
S+FVKNLNF T L + F + + ++K K KN G +SMGFGF+EF + E A
Sbjct: 615 SIFVKNLNFATTALQLTELFNP-LAGFVVATIKTKPDPKNSGGVLSMGFGFVEFRTKEQA 673
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
L G +L+GH L L+L H + K K S K++++N+ FEA RK
Sbjct: 674 NAAISALDGHVLEGHKLQLKLSHRQGGSSAGSKTSKS-GSNKIIIKNLPFEATRK 727
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S + +KNL F+ +++ + FG G++ SV+V K + GF F+EF+ ++
Sbjct: 712 SNKIIIKNLPFEATRKDILELFGAF---GQLKSVRVPKKFDKS---ARGFAFVEFNLLKE 765
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKL 718
A N L+G L G L++Q +A++D + +AE +K ++K+
Sbjct: 766 AENAMNQLEGVHLLGRRLVMQ--YAEQDSESA-EAEIEKMTSKV 806
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++ ++NLP+ AT ++ E F FG + V V K K ++G A+V + + + A A+
Sbjct: 712 SNKIIIKNLPFEATRKDILELFGAFGQLKSVR-VPKKFDKSARGFAFVEFNLLKEAENAM 770
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTL 397
L+ GR L + A S + E+ TS+ K +
Sbjct: 771 NQLEGVHLLGRRLVMQYAEQDSESAEAEIEKMTSKVRKQV 810
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 483 SAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVF 537
SAG SN + ++KNLP++++ ++ ++FG FG L V +P S + A V F
Sbjct: 702 SAGSKTSKSGSNKI-IIKNLPFEATRKDILELFGAFGQLKSVRVPKKFDKSARGFAFVEF 760
Query: 538 LEPVEAAAAFKGLAYKRYKGVPLYLEWAPSD 568
EA A L G L +++A D
Sbjct: 761 NLLKEAENAMNQLEGVHLLGRRLVMQYAEQD 791
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T + + F G++ ++ + D +R FAF+ F +EAE A+
Sbjct: 713 NKIIIKNLPFEATRKDILELFGAFGQLKSVRVPKKFDKSARGFAFVEFNLLKEAENAMNQ 772
Query: 61 FNKSYLDTCRISCEIA 76
+L R+ + A
Sbjct: 773 LEGVHLLGRRLVMQYA 788
>gi|50546647|ref|XP_500793.1| YALI0B12276p [Yarrowia lipolytica]
gi|74689812|sp|Q6CEW9.1|MRD1_YARLI RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49646659|emb|CAG83044.1| YALI0B12276p [Yarrowia lipolytica CLIB122]
Length = 828
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 259/776 (33%), Positives = 408/776 (52%), Gaps = 106/776 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQ----------KGEITDAKLMRTKDGKSRQFAFIGFRT 50
SR+ VKNLP Y+ E L+ FS +ITD K++R +DGK+R+F F+GFR+
Sbjct: 2 SRLIVKNLPPYLDEAGLKKHFSTVKDPKSAGFAPSDITDVKVVRARDGKTRRFGFVGFRS 61
Query: 51 EQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMP---RPWSRYSLKKEKEVSEDEKNPV 107
++ AE A+KYF+ S++++ +IS +A DPN+P R R + ++ +E +ED++
Sbjct: 62 DETAEAAVKYFDTSFINSTKISVAVAMTFTDPNVPLSSRERKRQAAQRAREDAEDDREAK 121
Query: 108 LAAKRGEKKTIEKVT---ENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSEN 164
A + TI+ + DP+L ++L MQ R +K WAN+ G +A++ +
Sbjct: 122 KARYLEKPMTIDDINGLGNASDPRLADYLDAMQVRSNAKTWANND-AGAVANEPQVIQST 180
Query: 165 ISQ------AIKGGEKSITLHVKSDKSN-----------------VITDSQATEKSKNAA 201
S KG ++ + ++S VI D A
Sbjct: 181 ASDDEYDEFTGKGDDEIDEDEDEEEESENKKDDDNEEAEEDEEDPVIED--------GLA 232
Query: 202 ADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSII 261
AD +SDMD+ + R + +GE EE+ EN H +E
Sbjct: 233 ADPGVSDMDWLRQRQTR-----------------IKEGEPEEDRENRHTESKSEG----- 270
Query: 262 KDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSK 321
G G VD PS V + ++GRLF+RNL YTA E++ R+ FS+
Sbjct: 271 ----KKGKGNAPKAATPVDE-EPSEDPTIVS--IRKTGRLFLRNLLYTAKEEDFRQLFSQ 323
Query: 322 FGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS 381
+G + EVH+ ++ T + KG A+V + PE+A A E D IFQGRLLH++P + KK
Sbjct: 324 YGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAAYEAQDGKIFQGRLLHILPGKPKKDY 383
Query: 382 DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSD 441
++ + H+ + LK+++E +RKA EA+ +WNSL+M D V+E++A+ G+ KS+
Sbjct: 384 NRLDEHDLKNL---PLKKQQELKRKA-EAAKQQFSWNSLYMNQDAVMESVAKSMGIKKSE 439
Query: 442 LLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKN 501
L+D +++D AV+ AL E VI + K GV+++S D R + V LVKN
Sbjct: 440 LIDPDSSDAAVKQALAEATVIGDVKSYFEKMGVDLASF--------DNKDRDDRVILVKN 491
Query: 502 LPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLY 561
P+ +++ E+A+MF ++G L KV++P T+A+V+F +A AAF LA++R+K LY
Sbjct: 492 FPFGTTQPEIAEMFSEYGDLYKVMMPPAGTIAIVIFKHIPDARAAFAKLAFRRFKTSILY 551
Query: 562 LEWAPSDVLSQSSTSKGNQKNDAVVGEH--DAKRALLEQQLEG--VTDADIDPDR--VES 615
LE P ++L N+K ++ EH K +E +L V D + +R S
Sbjct: 552 LEKGPKNLLP-------NEKMESDEVEHVKQDKIVTIEDKLSASDVMDTGSNDERPATAS 604
Query: 616 RSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVET 674
S+FVKNLNFKT L F + + + VK+K KN GK +SMGFGF+EF S E
Sbjct: 605 TSVFVKNLNFKTTSRVLTDAF-KALDGFLVAQVKMKPDSKNKGKFLSMGFGFVEFSSKEA 663
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
A + + G +LDGH L L++ + +DE+ + K +K+L++N+ FEA +K
Sbjct: 664 AEIAQKAMDGHVLDGHKLQLKISNRGQDEETTET--KKAIDSKILIKNLPFEATKK 717
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 143/347 (41%), Gaps = 66/347 (19%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+N P+ T+ E+ E FS++G++ +V + + IA V++ A A L
Sbjct: 487 ILVKNFPFGTTQPEIAEMFSEYGDLYKVMM------PPAGTIAIVIFKHIPDARAAFAKL 540
Query: 361 DNSIFQGRLLHV-------MP--------ARHKK--------------------SSDKQE 385
F+ +L++ +P H K S+D++
Sbjct: 541 AFRRFKTSILYLEKGPKNLLPNEKMESDEVEHVKQDKIVTIEDKLSASDVMDTGSNDERP 600
Query: 386 LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLF-----MRPDTVVENIARKHGVSKS 440
STS K L + R ++A KA + M+PD+ + G
Sbjct: 601 ATASTSVFVKNL-NFKTTSRVLTDA---FKALDGFLVAQVKMKPDSKNKGKFLSMGFGFV 656
Query: 441 DLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVK 500
+ +EA ++A + G + + ++N G + + T+ K + L+K
Sbjct: 657 EFSSKEAAEIAQKAMDGHVLDGHKLQLKISNRGQDEET--------TETKKAIDSKILIK 708
Query: 501 NLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLAYKRY 555
NLP+++++ ++ K+FG FGSL V +P ++ A ++ EA A L
Sbjct: 709 NLPFEATKKDVQKLFGAFGSLKTVRVPKKFNSESRGFAFAEYVSAKEAEHAMSALQGTHL 768
Query: 556 KGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEG 602
G L L++A +D S+ + ++ A V + A+R+ + +L G
Sbjct: 769 LGRRLVLQYAQADA---SNAEEEIERMQATVSKQAAQRSFADMKLAG 812
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ ++++K FG G + +V+V K + S GF F E+ S + A +
Sbjct: 705 ILIKNLPFEATKKDVQKLFGAF---GSLKTVRVPKKFNSE---SRGFAFAEYVSAKEAEH 758
Query: 678 VCRDLQGTILDGHALILQLCHA 699
LQGT L G L+LQ A
Sbjct: 759 AMSALQGTHLLGRRLVLQYAQA 780
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++++ F FG++ V V K S+G A+ Y + A A+
Sbjct: 704 KILIKNLPFEATKKDVQKLFGAFGSLKTVR-VPKKFNSESRGFAFAEYVSAKEAEHAMSA 762
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
L + GR L + A+ S+ ++E+ + +K QR
Sbjct: 763 LQGTHLLGRRLVLQYAQADASNAEEEIERMQATVSKQAAQR 803
>gi|403416240|emb|CCM02940.1| predicted protein [Fibroporia radiculosa]
Length = 805
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 265/748 (35%), Positives = 393/748 (52%), Gaps = 68/748 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQK----GEITDAKLMRTKDGKSRQFAFIGFRTEQEAEE 56
SR+ VKNLP Y+T++RLR +F G +TD KL+ DG SR+F FIG+++ EAE
Sbjct: 2 SRLIVKNLPAYLTQERLRSYFDSPDGPGGTLTDVKLVCRPDGTSRRFGFIGYKSPAEAER 61
Query: 57 AIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDE-KNPVLAAKRGEK 115
A K+FN++++D+ RI EI D PRP R L + +E N + A +
Sbjct: 62 AKKWFNRAFVDSSRILVEIVEGSKDAPPPRPNKRPRLGPGPDETETRLPNDIRATGQASG 121
Query: 116 KTIEKVTE--NDDPQLLEFLQVMQPRVK-SKMWANDTLIGLMADQKAKVSENISQAIKGG 172
+K ++ L EF+QVMQPR K WA D + + ++ A +I I
Sbjct: 122 ILAQKQSKASQSKSHLDEFMQVMQPRTKKGPSWA-DADVAMPLNRPATNGIDIKDQIDAT 180
Query: 173 E--KSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSA 230
+ KS S +++ + D+ + ++ D+ +SDMD+F+ R K A
Sbjct: 181 QSRKSSKAQPTSGENDEMKDATDSLDFESEHRDDGISDMDWFRKRTK------------A 228
Query: 231 GDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKD 290
D+ D E+ E+ S+EE D + + H ED P +P
Sbjct: 229 VLDEADPPAEKAFEQ-------SDEEVDDVDR---HEATVSEDP------PPDP------ 266
Query: 291 VQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIP 350
V++ +L++GRLF+RNL +T TEDELRE F G VS +HI +D TK+ KG+AYV +A P
Sbjct: 267 VKETILQTGRLFIRNLAFTCTEDELRELFRNQGEVSNIHIPLDAVTKQPKGLAYVTFARP 326
Query: 351 ESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEA 410
A A E LD + FQGRLLH++PA +K + E HN G KT+K RE +RKA A
Sbjct: 327 AQALSAFEALDRTSFQGRLLHILPAVDRKGKVEDE-HN----GKKTVKGEREAKRKA--A 379
Query: 411 SGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALT 470
+G W L+M D VV ++A + + KS++L+ E+++ AV++AL ET +I ETK L
Sbjct: 380 AGKEFNWAMLYMNSDAVVSSVADRMNIPKSEILNPESDNAAVKLALAETHIINETKSFLE 439
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV +S FS+ + ++RS+ LVKN+PY +S L MFG G L +V++P
Sbjct: 440 SHGVVLSV---FSSSR---VQRSDTTILVKNIPYGTSTDTLRTMFGTHGELRRVLVPPAG 493
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAP----SDVLSQSSTSKGNQKNDAVV 586
TLA++ F + +A AF+ LAY+R +YLE AP SDV + S G VV
Sbjct: 494 TLAIIEFEQAADARTAFRSLAYRRLGNTIMYLEKAPMGMFSDVPADSPAMSGQSSKAPVV 553
Query: 587 GEH-DAKRALLEQQ--LEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEG 643
+ RA + +EG DA +P +LFVKNL F T E L H H+
Sbjct: 554 ATAVEPIRAPVSGAALVEG-DDAATEPPLSAGTTLFVKNLAFSTTTEGL-VHALRHLPGF 611
Query: 644 RILSVKVK-KHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD 702
V+ K + +SMG+GF+ F + + A + L+G +LDGH L + D
Sbjct: 612 AFARVQAKVDPARPTARLSMGYGFVGFRTKDDAKRALKSLEGFVLDGHVLAAKWAGRGVD 671
Query: 703 EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
E ++ + S K++V+NV FEA +K
Sbjct: 672 EAEGQEVKGKPKSAKMIVKNVPFEATKK 699
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLA 551
+VKN+P+++++ ++ ++FG L V LP T+ A + F+ P EAA A L
Sbjct: 687 MIVKNVPFEATKKDIQELFGAHAQLKSVRLPRKFNHRTRGFAFLEFVSPHEAARAHATLR 746
Query: 552 YKRYKGVPLYLEWA 565
+ + G L LEWA
Sbjct: 747 HTHFLGRHLVLEWA 760
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+S ++ V+N+P+ AT+ +++E F + V + K R++G A++ + P A+RA
Sbjct: 683 KSAKMIVKNVPFEATKKDIQELFGAHAQLKSVRL-PRKFNHRTRGFAFLEFVSPHEAARA 741
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
L ++ F GR L V+ ++D +EL G K+ +RK + +G
Sbjct: 742 HATLRHTHFLGRHL-VLEWAEDGAADVEELRKKAGVGFGGGKEMPGRKRKLNLGNGG 797
>gi|448122956|ref|XP_004204573.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
gi|448125223|ref|XP_004205131.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
gi|358249764|emb|CCE72830.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
gi|358350112|emb|CCE73391.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
Length = 841
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 259/766 (33%), Positives = 409/766 (53%), Gaps = 75/766 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LPKY+TE+RLR FSQ+G++TD K+MR +DG+SR+F F+G+R ++A +A K+
Sbjct: 2 SRIIVKGLPKYLTEERLRQHFSQRGDVTDVKIMRKRDGESRRFGFVGYRGVEDASDAEKF 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPV-LAAKRGEKKTIE 119
FNKS++DT RI E+A+ DPN+P + K + + E E+ L +R EKK
Sbjct: 62 FNKSFIDTSRIEVELAKSFADPNVPASVRKRQYMKLESLKEQEQRLFELENQRKEKKQKT 121
Query: 120 KVTEND-----DPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKG--G 172
++ D +PQL E+++VM+P +S+ W N+ + A +E +++A+KG G
Sbjct: 122 SKSQIDEEIQKNPQLREYMEVMKPSSQSRSWDNNETVD---GSGAPSTEALAEALKGKSG 178
Query: 173 EKSI----TLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDD 228
E S TL + + + D + A D D SD D
Sbjct: 179 EPSTQTNNTLSIDRESDDEYEDYNRINGASAEADD---------------DESDKFLNLD 223
Query: 229 SAGDDDDDDDGEEEEEEENDHNG-DSN-EECDSIIKDSIHSGVGEEDANGEIVDPGNPSS 286
+ D +D E E+E +D D N + + + H E DA+ E +P P +
Sbjct: 224 TFAPKPDGEDNVENEQETSDQAARDPNVSDLEWLKSHRRHMRDNENDASQE--EP--PKA 279
Query: 287 SSKDVQQEVL--------------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVV 332
+ +D ++ + E+GRLFVRN+ YT+ E++ + F ++G + EVH+ +
Sbjct: 280 AEQDQEESYMEEKTDEEKAVDRIRETGRLFVRNILYTSKEEDFKALFDQYGPLEEVHMAI 339
Query: 333 DKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNST 390
D T + KG YV + E A A +D IFQGRLLH++PA KKS D+ ++ N
Sbjct: 340 DTRTGKPKGYVYVQFKNSEDALEAYRSMDKQIFQGRLLHILPADAKKSHRLDEDDIKNL- 398
Query: 391 SQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL 450
LK++RE +RKA+ A + +WNSL+M D V+E++A K G+SKS ++D + +
Sbjct: 399 -----PLKKQRELKRKAT-AGKSQFSWNSLYMNTDAVLESVAAKMGMSKSSIIDPQNSSS 452
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AV+ AL E VI + +K + V+++S +R + V LVKN P+ +S E
Sbjct: 453 AVKQALAEADVIGDVRKYFESKYVDLTSFSR--------KERDDRVILVKNFPFGTSSSE 504
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L ++F +G L+++++P T+A+V F + A AAF LAYKR+K LYLE P D+
Sbjct: 505 LGELFSVYGQLNRILMPPAGTIAIVQFRDVPSARAAFSKLAYKRFKKSILYLEKGPKDLF 564
Query: 571 SQ----SSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFK 626
++ + K +K++ V + A ++ + G ++D + S+FVKNLNF
Sbjct: 565 TREVSEEESEKLEKKDNVVEPKLTADDLMVAEGNNGDAINEVDTYEGPTVSVFVKNLNFA 624
Query: 627 TCDENLRKHFGEHIKEGRILS-VKVKKHLKNG-KNVSMGFGFIEFDSVETATNVCRDLQG 684
T +E L F G IL+ VK K K +SMGFGF+EF + E A + + G
Sbjct: 625 TTNEALSNAFKSV--PGFILALVKTKPDPKKPDSTLSMGFGFVEFKTKEDANTAIKTMDG 682
Query: 685 TILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+LDGH L L+L + + + K S+K++++N+ FE RK
Sbjct: 683 YVLDGHKLQLKLSNRQGGSGKNETKTKSSKSSKIIIKNLPFETTRK 728
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 622 NLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRD 681
NL F+T +++ + FG G+I S +V K + GF F+EF+ ++ A N
Sbjct: 720 NLPFETTRKDIVELFGAF---GQIKSARVPKKFDRS---ARGFAFVEFNLLKEAENAIEQ 773
Query: 682 LQGTILDGHALILQLC 697
LQG L G L++Q
Sbjct: 774 LQGVHLLGRRLVMQYA 789
>gi|328354024|emb|CCA40421.1| Multiple RNA-binding domain-containing protein 1 [Komagataella
pastoris CBS 7435]
Length = 834
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 261/789 (33%), Positives = 416/789 (52%), Gaps = 125/789 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LPKY TED+L+ +FS++G+++D KLM+ + G+SR+FAFIG++ ++AE+A Y
Sbjct: 2 SRLIVKGLPKYYTEDKLKAYFSKQGDVSDVKLMKNRFGESRRFAFIGYKNAEDAEKAASY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDE-KNPVLAAKRGEKKTIE 119
+N S++DT RIS E+A D N+P S K +K ++ED K+ KR E+ ++
Sbjct: 62 YNDSFIDTARISVELAVTFADSNVP-----LSFKAKKRLAEDRIKDTEEKLKRLEEAPMK 116
Query: 120 KVTEND----------DPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAI 169
K N D +L +F+ ++P +++ WA+++ + + + +E + +A+
Sbjct: 117 KNKTNPIREIDEQIAKDHKLRDFMNALRPGSQTQTWADNSAV---SGEGGPTNEALVEAL 173
Query: 170 KGGEKSITLHVKSDKSNVITDSQATEK--------------------------------S 197
K DKS TDS + S
Sbjct: 174 ----------AKRDKSEPTTDSAQHDPNVSDHASDDDYDDFQKSNEDNESEEEEEMIPLS 223
Query: 198 KNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEEN----DHNGDS 253
+ A AD+ M+D+++ R +K SD+ S + G D + +EEE +G +
Sbjct: 224 EVAPADDSMTDLEWLIQR-RKRMSDNPSHKEQNGTKDTEHKRPGHDEEETTATQSQDGQT 282
Query: 254 NEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATED 313
+ + + I + EED N +I+ ++GRLFVRN+ YTATE
Sbjct: 283 SSQQQTEI---VQEEESEEDQNIKIIS----------------QTGRLFVRNISYTATEA 323
Query: 314 ELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
E R+ FS +G + EVH+ +D T SKG YV + PE A A + LD IFQGRLLH++
Sbjct: 324 EFRQLFSTYGELDEVHVAIDTRTGASKGFVYVKFQDPEQALEAYKSLDKQIFQGRLLHIL 383
Query: 374 PARHKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENI 431
PA+ KK D+ ++ N LK++RE ++K +AS + +WNSL+M D V+ ++
Sbjct: 384 PAQPKKDHRLDEFDIKNL------PLKKQRELKKKV-DASKSVFSWNSLYMNNDAVLSSV 436
Query: 432 ARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLK 491
A K G+SK++L+D + + AV+ AL E VI + +K + GV+++ K D +
Sbjct: 437 ADKLGISKTELIDPQNSSSAVKQALAEAHVIGDVRKYFESKGVDLT--------KFDTKE 488
Query: 492 RSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLA 551
R + V LVKN PY +S E+ +F ++G L +V++P T+A+V F + +AF LA
Sbjct: 489 RDDKVILVKNFPYGTSLDEITDLFAQYGELKRVLMPPAGTIAVVEFRDAPSGRSAFTKLA 548
Query: 552 YKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDAD-IDP 610
Y+R+K +YLE P+ + ++ S N+ D V + + K T D +D
Sbjct: 549 YRRFKKSIIYLEKGPTGLFTRDPNS--NEAPD-VAEKKEGKEV-------KATGGDLLDT 598
Query: 611 DRVE--------SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVS 661
D+ + + S+FVKNL+F T + L F + ++ + +VK K KN GK +S
Sbjct: 599 DKSDEALTPSGPTVSVFVKNLSFSTTVQTLTDTF-KPLEGFTVATVKTKPDAKNPGKTLS 657
Query: 662 MGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVR 721
MGFGF+EF + E A L G LDGH L L+L H +K KKA K+S K++++
Sbjct: 658 MGFGFVEFRTKEQAELAISTLDGKPLDGHRLQLKLSH-RKSGTNEKKARSSKTS-KIIIK 715
Query: 722 NVAFEAQRK 730
N+ FEA RK
Sbjct: 716 NLPFEATRK 724
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S+I +KNLP T + + FS G + A++ + D +R FAF+ F +EAE+A+
Sbjct: 710 SKIIIKNLPFEATRKDIVELFSSFGHLKSARVPKKFDSSARGFAFVEFSLLKEAEQAMDQ 769
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDE 103
+L R+ E A++ + N R + K +K+V+ E
Sbjct: 770 LQGVHLLGRRLVMEYAQQDAE-NAEEEIERMTKKVQKQVASRE 811
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ ++ ++NLP+ AT ++ E FS FG++ + D+ ++G A+V +++ + A +A+
Sbjct: 709 TSKIIIKNLPFEATRKDIVELFSSFGHLKSARVPKKFDSS-ARGFAFVEFSLLKEAEQAM 767
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
+ L GR L + A+ + ++E+ T + K + R
Sbjct: 768 DQLQGVHLLGRRLVMEYAQQDAENAEEEIERMTKKVQKQVASR 810
>gi|151942889|gb|EDN61235.1| multiple RNA-binding domain containing protein [Saccharomyces
cerevisiae YJM789]
Length = 887
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 264/826 (31%), Positives = 426/826 (51%), Gaps = 146/826 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE---------------ITDAKLMRTKDGKSRQFAF 45
SRI VK LP Y+T+D LR+ F+++ ITD K++R ++G+SR+F F
Sbjct: 2 SRIIVKGLPVYLTDDNLREHFTKRLRQKHSHQAVNGSGPDLITDVKILRDRNGESRRFGF 61
Query: 46 IGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKN 105
IG+R E++A +A++YFN S+++T +I +A+ DP +P+P + K E E+
Sbjct: 62 IGYRNEEDAFDAVEYFNGSFINTSKIEVSMAKSFADPRVPQPMKEKRREALKRFREKEEK 121
Query: 106 PVLAAKRGEKKTIEKVTENDD------PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKA 159
+ R +KK E N D QL EF++ M+P + W + + D+K
Sbjct: 122 LLQEENRKKKKVDENKHSNIDDEIRKNKQLQEFMETMKPSSQVTSWEKVGIDKSIEDEKL 181
Query: 160 KVSENISQAIKGGEKSITLHV--------KSDKSNVITDSQA------------------ 193
K E S +++G S+ H K + N++ ++++
Sbjct: 182 KREEEDS-SVQGN--SLLAHALALKEENNKDEAPNLVIENESDDEYSALNRNRDEDQEDA 238
Query: 194 ------------------------------TEKSKNAAADELMSDMDYFKS-RVKKDWSD 222
EK +N A DE +SD+D+FK RV+ S+
Sbjct: 239 GEEEKMISISNLKDTDIGLVNDDANSDEKENEKRRNLAQDEKVSDLDWFKQRRVRIKESE 298
Query: 223 SESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPG 282
+E+ + S+ + + NE D+ E +P
Sbjct: 299 AETREKSSS-----------------YATEQNESLDT--------------KKEEQPEPA 327
Query: 283 NPSSSSKDVQQE-VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
P + +++ E + ++GRLF+RN+ YT+ E++ R+ FS FG + EVH+ +D T +SKG
Sbjct: 328 VPQKTDEELAIEKINQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKG 387
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQ 399
AYVL+ P++A A LD IFQGRLLH++P KKS D+ +L N LK+
Sbjct: 388 FAYVLFKDPKNAVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNM------PLKK 441
Query: 400 RREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGET 459
++E +RKA+ AS T +WNSL+M D V+ ++A K G+ KS L+D E + AV+ AL E
Sbjct: 442 QKELKRKAA-ASRQTFSWNSLYMNQDAVLGSVAAKLGLEKSQLIDAENSSSAVKQALAEA 500
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
VI + +K + GV+ L +FS K+ +R + V LVKN P+ ++ EL +MF +G
Sbjct: 501 HVIGDVRKYFESKGVD---LTKFSQLKSTN-QRDDKVILVKNFPFGTTREELGEMFLPYG 556
Query: 520 SLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ------- 572
L+++++P T+A+V F + A AAF L+YKR+K +YLE P D ++
Sbjct: 557 KLERLLMPPAGTIAIVQFRDTTSARAAFTKLSYKRFKDGIIYLERGPKDCFTKPAEADDL 616
Query: 573 -SSTSKGNQKNDAVVGEHDAKRALLEQQ---LEGVTDADIDPDRVE--SRSLFVKNLNFK 626
++TS ++N V + L+E EG ++A D D ++ + S+F+KNLNF
Sbjct: 617 INNTSAKEEENPVEV--KPSSNDLMEANKDVTEGSSNAH-DEDVIDGPTVSIFIKNLNFS 673
Query: 627 TCDENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQG 684
T ++NL F + G +++ VK K K+ GK +SMGFGF+EF + E A V + G
Sbjct: 674 TTNQNLTDRF--KVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDG 731
Query: 685 TILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
T++DGH + L+L H + + K + +K S K++V+N+ FEA RK
Sbjct: 732 TVIDGHKIQLKLSHRQASQSGNTKTKSNKKSGKIIVKNLPFEATRK 777
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG++ V+NLP+ AT ++ E F+ FG + V V K K ++G A+V + +P+ A A+
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAENAM 820
Query: 358 EVLDNSIFQGRLL 370
+ L GR L
Sbjct: 821 DQLHGVHLLGRRL 833
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 486 KTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEP 540
KT K+S + +VKNLP++++ ++ ++F FG L V +P S + A V FL P
Sbjct: 755 KTKSNKKSGKI-IVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLP 813
Query: 541 VEAAAAFKGLAYKRYKGVPLYLEW 564
EA A L G L +++
Sbjct: 814 KEAENAMDQLHGVHLLGRRLVMQY 837
>gi|410075077|ref|XP_003955121.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
gi|372461703|emb|CCF55986.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
Length = 850
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 260/774 (33%), Positives = 415/774 (53%), Gaps = 82/774 (10%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQK------------GEITDAKLMRTKDGKSRQFAFIGF 48
SRI VKN+P ++ + +L++ F+++ ITD K++R KDG SR+FAFIG+
Sbjct: 2 SRIIVKNVPTFIDDKKLKEHFNKRLIEKYENSQNIDNLITDVKILRDKDGNSRKFAFIGY 61
Query: 49 RTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWS---RYSLKKEKEVSE---D 102
R E +A +AI+Y++ S++ T +IS A+ DPN+PR R +LK+ +E E
Sbjct: 62 RNESDALDAIRYYDGSFIYTAKISVSEAKSFADPNVPRSMKEKKREALKRLREREEKLLT 121
Query: 103 EKNPVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVS 162
EKN K+ + +I+ E + QL EF++ M+P K W + + + +V+
Sbjct: 122 EKNAKKQKKQERRNSIDNEIEKN-KQLQEFIETMKPSAKVASWEATSTNAVTEQEGEEVN 180
Query: 163 ENISQAIKG-----GEKSITLHVKSDKSNV-ITDSQATEKSKNAAADELMSDMDYFKSRV 216
++ A+ E I SD V + +Q E + +++MS D +
Sbjct: 181 PLLAHALAMKSDDENENDIASGDNSDDEYVDLNRNQNNEDNVQENGEQMMSLSD-----L 235
Query: 217 KKDWSDSESEDDSAGDDD-------DDDDGEEEEEEENDHNGDSNEECDSIIKDS---IH 266
S++ ++DD+ D D DGE++ ++N ++NEE SI+++ I
Sbjct: 236 NDGESNALAKDDAVSDLDWLKQRRVRIRDGEDKAVKKN--KTETNEE-KSIVEEGSQEIE 292
Query: 267 SGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVS 326
+E+ N E ++ E+GRLF+RN+ YT+TED+ + F KFG +
Sbjct: 293 ETRSQEELNLE----------------KIQETGRLFLRNILYTSTEDDFKALFGKFGELE 336
Query: 327 EVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQ 384
E+H+ +D T +SKG AYVL+ P+ A +A LD IFQGRLLH++PA KK D
Sbjct: 337 EIHVALDTRTGQSKGFAYVLFKNPQDAVQAYIELDKQIFQGRLLHILPAESKKDHRLDDF 396
Query: 385 ELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD 444
+L N LK++RE +RKA+ AS +T +WN+L+M D V+ ++A K G+ KSDL+D
Sbjct: 397 DLKNM------PLKKQRELKRKAN-ASKSTFSWNALYMNQDAVLSSVAAKLGMEKSDLID 449
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPY 504
E++ AV+ AL E VI + +K GVN+ ++ + D +R + V LVKN PY
Sbjct: 450 AESSGAAVKQALAEAHVINDVRKFFEEKGVNLLKFQDLK--RPD--QRDDRVILVKNFPY 505
Query: 505 DSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEW 564
++ E+ ++F FG ++++++P T+A+V + + A AAF LA+KR+K +YLE
Sbjct: 506 GTTTEEIGELFLPFGKIERLVMPPAGTIAIVQYRDITSARAAFTKLAFKRFKDGIIYLEK 565
Query: 565 APSDVLSQSSTSKGN-QKNDAVVGEHDAKRALLEQQLEGVTD--ADIDPDRV---ESRSL 618
P D ++ + + K DA E + +EG T+ ++ D V + S+
Sbjct: 566 GPKDCFNKDAEVDASINKADAEAKEAKVAKPSSHDVMEGTTNEVSNESQDDVINGPTVSV 625
Query: 619 FVKNLNFKTCDENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETAT 676
F+KNLNF T L F + G +++ VK K K+ GK VSMGFGF+EF + E A
Sbjct: 626 FIKNLNFSTTSAQLNDKFSQF--SGFVIAQVKTKPDSKHPGKTVSMGFGFVEFRTKEQAN 683
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
V L GT++DGH + L+L H +K S K++V+N+ FEA RK
Sbjct: 684 AVIAALDGTVIDGHKIQLKLSHRTTASNTTTTKKKGVKSGKIIVKNLPFEATRK 737
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG++ V+NLP+ AT ++ E F+ FG + V V K K ++G A+V + +P+ A A+
Sbjct: 722 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAEAAM 780
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNST 390
+ L GR L + A+ + ++E+ T
Sbjct: 781 DQLQGVHLLGRRLVMQYAQQDAENAEEEIARMT 813
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
+VKNLP++++ ++ ++F FG L V +P S + A V FL P EA AA L
Sbjct: 726 IVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAEAAMDQLQG 785
Query: 553 KRYKGVPLYLEWAPSD 568
G L +++A D
Sbjct: 786 VHLLGRRLVMQYAQQD 801
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+I VKNLP T + + F+ G++ ++ + D +R FAF+ F +EAE A+
Sbjct: 724 KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAEAAMDQL 783
Query: 62 NKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEKV 121
+L R+ + A++ + N +R + K +++ + +E + + A G KK +E
Sbjct: 784 QGVHLLGRRLVMQYAQQDAE-NAEEEIARMTKKVKRQAAANELSAIRQAS-GRKK-LELE 840
Query: 122 TENDD 126
EN D
Sbjct: 841 DENTD 845
>gi|349581915|dbj|GAA27072.1| K7_Mrd1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 887
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 262/824 (31%), Positives = 424/824 (51%), Gaps = 142/824 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE---------------ITDAKLMRTKDGKSRQFAF 45
SRI VK LP Y+T+D LR+ F+++ ITD K++R ++G+SR+F F
Sbjct: 2 SRIIVKGLPVYLTDDNLREHFTKRLRQKHSHQAVNGSGPDLITDVKILRDRNGESRRFGF 61
Query: 46 IGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKN 105
IG+R E++A +A++YFN S+++T +I +A+ DP +P+P + K E E+
Sbjct: 62 IGYRNEEDAFDAVEYFNGSFINTSKIEVSMAKSFADPRVPQPMKEKRREALKRFREKEEK 121
Query: 106 PVLAAKRGEKKTIEKVTENDD------PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKA 159
+ R +KK E N D QL EF++ M+P + W + + D+K
Sbjct: 122 LLQEENRKKKKVDENKHSNIDDEIRKNKQLQEFMETMKPSSQVTSWEKVGIDKSIEDEKL 181
Query: 160 KVSENISQAIKGGEKSITLHV--------KSDKSNVITDSQA------------------ 193
K E S +++G S+ H K + N++ ++++
Sbjct: 182 KREEEDS-SVQGN--SLLAHALALKEENNKDEAPNLVIENESDDEYSALNRNRDEDQEDA 238
Query: 194 ------------------------------TEKSKNAAADELMSDMDYFKS-RVKKDWSD 222
EK +N A DE +SD+D+FK RV+ S+
Sbjct: 239 GEEEKMISISNLKDTDIGLVNDDANSDEKENEKRRNLAQDEKVSDLDWFKQRRVRIKESE 298
Query: 223 SESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPG 282
+E+ + S+ + + NE D+ E +P
Sbjct: 299 AETREKSSS-----------------YATEQNESLDT--------------KKEEQPEPA 327
Query: 283 NPSSSSKDVQQE-VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
P + +++ E + ++GRLF+RN+ YT+ E++ R+ FS FG + EVH+ +D T +SKG
Sbjct: 328 VPQKTDEELAIEKINQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKG 387
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQ 399
AYVL+ P++A A LD IFQGRLLH++P KKS D+ +L N LK+
Sbjct: 388 FAYVLFKDPKNAVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNM------PLKK 441
Query: 400 RREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGET 459
++E +RKA+ AS T +WNSL+M D V+ ++A K G+ KS L+D E + AV+ AL E
Sbjct: 442 QKELKRKAA-ASRQTFSWNSLYMNQDAVLGSVAAKLGLEKSQLIDAENSSSAVKQALAEA 500
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
VI + +K + GV+ L +FS K+ +R + V LVKN P+ ++ EL +MF +G
Sbjct: 501 HVIGDVRKYFESKGVD---LTKFSQLKSTN-QRDDKVILVKNFPFGTTREELGEMFLPYG 556
Query: 520 SLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGN 579
L+++++P T+A+V F + A AAF L+YKR+K +YLE P D ++ + +
Sbjct: 557 KLERLLMPPAGTIAIVQFRDTTSARAAFTKLSYKRFKDGIIYLEKGPKDCFTKPAEADDL 616
Query: 580 QKNDAVVGEHD------AKRALLEQQ---LEGVTDADIDPDRVE--SRSLFVKNLNFKTC 628
N + E + + L+E EG ++A D D ++ + S+F+KNLNF T
Sbjct: 617 INNTSAKEEENPVEIKPSSNDLMEANKDVTEGSSNAH-DEDVIDGPTVSIFIKNLNFSTT 675
Query: 629 DENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTI 686
++NL F + G +++ VK K K+ GK +SMGFGF+EF + E A V + GT+
Sbjct: 676 NQNLTDRF--KVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDGTV 733
Query: 687 LDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+DGH + L+L H + + K + +K S K++V+N+ FEA RK
Sbjct: 734 IDGHKIQLKLSHRQASQNGNTKTKSNKKSGKIIVKNLPFEATRK 777
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG++ V+NLP+ AT ++ E F+ FG + V V K K ++G A+V + +P+ A A+
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAENAM 820
Query: 358 EVLDNSIFQGRLL 370
+ L GR L
Sbjct: 821 DQLHGVHLLGRRL 833
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 486 KTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEP 540
KT K+S + +VKNLP++++ ++ ++F FG L V +P S + A V FL P
Sbjct: 755 KTKSNKKSGKI-IVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLP 813
Query: 541 VEAAAAFKGLAYKRYKGVPLYLEW 564
EA A L G L +++
Sbjct: 814 KEAENAMDQLHGVHLLGRRLVMQY 837
>gi|259150262|emb|CAY87065.1| Mrd1p [Saccharomyces cerevisiae EC1118]
Length = 887
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 262/824 (31%), Positives = 424/824 (51%), Gaps = 142/824 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE---------------ITDAKLMRTKDGKSRQFAF 45
SRI VK LP Y+T+D LR+ F+++ ITD K++R ++G+SR+F F
Sbjct: 2 SRIIVKGLPVYLTDDNLREHFTKRLRQKHSHQAVNGSGPDLITDVKILRDRNGESRRFGF 61
Query: 46 IGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKN 105
IG+R E++A +A++YFN S+++T +I +A+ DP +P+P + K E E+
Sbjct: 62 IGYRNEEDAFDAVEYFNGSFINTSKIEVSMAKSFADPRVPQPMKEKRREALKRFREKEEK 121
Query: 106 PVLAAKRGEKKTIEKVTENDD------PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKA 159
+ R +KK E N D QL EF++ M+P + W + + D+K
Sbjct: 122 LLQEENRKKKKVDENKHSNIDDEIRKNKQLQEFMETMKPSSQVTSWEKVGIDKSIEDEKL 181
Query: 160 KVSENISQAIKGGEKSITLHV--------KSDKSNVITDSQA------------------ 193
K E S +++G S+ H K + N++ ++++
Sbjct: 182 KREEEDS-SVQGN--SLLAHALALKEENNKDEAPNLVIENESDDEYSALNRNRDEDQEDA 238
Query: 194 ------------------------------TEKSKNAAADELMSDMDYFKS-RVKKDWSD 222
EK +N A DE +SD+D+FK RV+ S+
Sbjct: 239 GEEEKMISISNLKDTDIGLVNDDANSDEKENEKRRNLAQDEKVSDLDWFKQRRVRIKESE 298
Query: 223 SESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPG 282
+E+ + S+ + + NE D+ E +P
Sbjct: 299 AETREKSSS-----------------YATEQNESLDT--------------KKEEQPEPA 327
Query: 283 NPSSSSKDVQQE-VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
P + +++ E + ++GRLF+RN+ YT+ E++ R+ FS FG + EVH+ +D T +SKG
Sbjct: 328 VPQKTDEELAIEKINQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKG 387
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQ 399
AYVL+ P++A A LD IFQGRLLH++P KKS D+ +L N LK+
Sbjct: 388 FAYVLFKDPKNAVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNM------PLKK 441
Query: 400 RREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGET 459
++E +RKA+ AS T +WNSL+M D V+ ++A K G+ KS L+D E + AV+ AL E
Sbjct: 442 QKELKRKAA-ASRQTFSWNSLYMNQDAVLGSVAAKLGLEKSQLIDAENSSSAVKQALAEA 500
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
VI + +K + GV+ L +FS K+ +R + V LVKN P+ ++ EL +MF +G
Sbjct: 501 HVIGDVRKYFESKGVD---LTKFSQLKSTN-QRDDKVILVKNFPFGTTREELGEMFLPYG 556
Query: 520 SLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGN 579
L+++++P T+A+V F + A AAF L+YKR+K +YLE P D ++ + +
Sbjct: 557 KLERLLMPPAGTIAIVQFRDTTSARAAFTKLSYKRFKDGIIYLERGPKDCFTKPAEADDL 616
Query: 580 QKNDAVVGEHD------AKRALLEQQ---LEGVTDADIDPDRVE--SRSLFVKNLNFKTC 628
N + E + + L+E EG ++A D D ++ + S+F+KNLNF T
Sbjct: 617 INNTSAKEEENPVEIKPSSNDLMEANKDVTEGSSNAH-DEDVIDGPTVSIFIKNLNFSTT 675
Query: 629 DENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTI 686
++NL F + G +++ VK K K+ GK +SMGFGF+EF + E A V + GT+
Sbjct: 676 NQNLTDKF--KVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDGTV 733
Query: 687 LDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+DGH + L+L H + + K + +K S K++V+N+ FEA RK
Sbjct: 734 IDGHKIQLKLSHRQASQSGNTKTKSNKKSGKIIVKNLPFEATRK 777
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG++ V+NLP+ AT ++ E F+ FG + V V K K ++G A+V + +P+ A +
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAENVM 820
Query: 358 EVLDNSIFQGRLL 370
+ L GR L
Sbjct: 821 DQLHGVHLLGRRL 833
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 486 KTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEP 540
KT K+S + +VKNLP++++ ++ ++F FG L V +P S + A V FL P
Sbjct: 755 KTKSNKKSGKI-IVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLP 813
Query: 541 VEAAAAFKGLAYKRYKGVPLYLEW 564
EA L G L +++
Sbjct: 814 KEAENVMDQLHGVHLLGRRLVMQY 837
>gi|365762580|gb|EHN04114.1| Mrd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 887
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 262/824 (31%), Positives = 424/824 (51%), Gaps = 142/824 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE---------------ITDAKLMRTKDGKSRQFAF 45
SRI VK LP Y+T+D LR+ F+++ ITD K++R ++G+SR+F F
Sbjct: 2 SRIIVKGLPVYLTDDNLREHFTKRLRQKHSHQAVNGSGPDLITDVKILRDRNGESRRFGF 61
Query: 46 IGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKN 105
IG+R E++A +A++YFN S+++T +I +A+ DP +P+P + K E E+
Sbjct: 62 IGYRNEEDAFDAVEYFNGSFINTSKIEVSMAKSFADPRVPQPMKEKRREALKRFREKEEK 121
Query: 106 PVLAAKRGEKKTIEKVTENDD------PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKA 159
+ R +KK E N D QL EF++ M+P + W + + D+K
Sbjct: 122 LLQEENRKKKKVDENKHSNIDDEIRKNKQLQEFMETMKPSSQVTSWEKVGIDKSIEDEKL 181
Query: 160 KVSENISQAIKGGEKSITLHV--------KSDKSNVITDSQA------------------ 193
K E S +++G S+ H K + N++ ++++
Sbjct: 182 KREEEDS-SVQGN--SLLAHALALKEENNKDEAPNLVIENESDDEYSALNRNRDEDQEDA 238
Query: 194 ------------------------------TEKSKNAAADELMSDMDYFKS-RVKKDWSD 222
EK +N A DE +SD+D+FK RV+ S+
Sbjct: 239 GEEEKMISISNLKDTDIGLVNDDANSDEKENEKRRNLAQDEKVSDLDWFKQRRVRIKESE 298
Query: 223 SESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPG 282
+E+ + S+ + + NE D+ E +P
Sbjct: 299 AETREKSSS-----------------YATEQNESLDT--------------KKEEQPEPA 327
Query: 283 NPSSSSKDVQQE-VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
P + +++ E + ++GRLF+RN+ YT+ E++ R+ FS FG + EVH+ +D T +SKG
Sbjct: 328 VPQKTDEELAIEKINQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKG 387
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQ 399
AYVL+ P++A A LD IFQGRLLH++P KKS D+ +L N LK+
Sbjct: 388 FAYVLFKDPKNAVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNM------PLKK 441
Query: 400 RREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGET 459
++E +RKA+ AS T +WNSL+M D V+ ++A K G+ KS L+D E + AV+ AL E
Sbjct: 442 QKELKRKAA-ASRQTFSWNSLYMNQDAVLGSVAAKLGLEKSQLIDAENSSSAVKQALAEA 500
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
VI + +K + GV+ L +FS K+ +R + V LVKN P+ ++ EL +MF +G
Sbjct: 501 HVIGDVRKYFESKGVD---LTKFSQLKSTN-QRDDKVILVKNFPFGTTREELGEMFLPYG 556
Query: 520 SLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGN 579
L+++++P T+A+V F + A AAF L+YKR+K +YLE P D ++ + +
Sbjct: 557 KLERLLMPPAGTIAIVQFRDTTSARAAFTKLSYKRFKDGIIYLEKGPKDCFTKPAEADDL 616
Query: 580 QKNDAVVGEHD------AKRALLEQQ---LEGVTDADIDPDRVE--SRSLFVKNLNFKTC 628
N + E + + L+E EG ++A D D ++ + S+F+KNLNF T
Sbjct: 617 INNTSAKEEENPVEIKPSSNDLMEANKDVTEGSSNAH-DEDVIDGPTVSIFIKNLNFSTT 675
Query: 629 DENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTI 686
++NL F + G +++ VK K K+ GK +SMGFGF+EF + E A V + GT+
Sbjct: 676 NQNLTDKF--KVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDGTV 733
Query: 687 LDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+DGH + L+L H + + K + +K S K++V+N+ FEA RK
Sbjct: 734 IDGHKIQLKLSHRQASQSGNTKTKSNKKSGKIIVKNLPFEATRK 777
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG++ V+NLP+ AT ++ E F+ FG + V V K K ++G A+V + +P+ A +
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAENVM 820
Query: 358 EVLDNSIFQGRLL 370
+ L GR L
Sbjct: 821 DQLHGVHLLGRRL 833
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 486 KTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEP 540
KT K+S + +VKNLP++++ ++ ++F FG L V +P S + A V FL P
Sbjct: 755 KTKSNKKSGKI-IVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLP 813
Query: 541 VEAAAAFKGLAYKRYKGVPLYLEW 564
EA L G L +++
Sbjct: 814 KEAENVMDQLHGVHLLGRRLVMQY 837
>gi|207340299|gb|EDZ68693.1| YPR112Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269058|gb|EEU04395.1| Mrd1p [Saccharomyces cerevisiae JAY291]
Length = 887
Score = 362 bits (928), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 262/824 (31%), Positives = 424/824 (51%), Gaps = 142/824 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE---------------ITDAKLMRTKDGKSRQFAF 45
SRI VK LP Y+T+D LR+ F+++ ITD K++R ++G+SR+F F
Sbjct: 2 SRIIVKGLPVYLTDDNLREHFTKRLRQKHSHQAVNGSGPDLITDVKILRDRNGESRRFGF 61
Query: 46 IGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKN 105
IG+R E++A +A++YFN S+++T +I +A+ DP +P+P + K E E+
Sbjct: 62 IGYRNEEDAFDAVEYFNGSFINTSKIEVSMAKSFADPRVPQPMKEKRREALKRFREKEEK 121
Query: 106 PVLAAKRGEKKTIEKVTENDD------PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKA 159
+ R +KK E N D QL EF++ M+P + W + + D+K
Sbjct: 122 LLQEENRKKKKVDENKHSNIDDEIRKNKQLQEFMETMKPSSQVTSWEKVGIDKSIEDEKL 181
Query: 160 KVSENISQAIKGGEKSITLHV--------KSDKSNVITDSQA------------------ 193
K E S +++G S+ H K + N++ ++++
Sbjct: 182 KREEEDS-SVQGN--SLLAHALALKDENNKDEAPNLVIENESDDEYSALNRNRDEDQEDA 238
Query: 194 ------------------------------TEKSKNAAADELMSDMDYFKS-RVKKDWSD 222
EK +N A DE +SD+D+FK RV+ S+
Sbjct: 239 GEEEKMISISNLKDTDIGLVNDDANSDEKENEKRRNLAQDEKVSDLDWFKQRRVRIKESE 298
Query: 223 SESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPG 282
+E+ + S+ + + NE D+ E +P
Sbjct: 299 AETREKSSS-----------------YATEQNESLDT--------------KKEEQPEPA 327
Query: 283 NPSSSSKDVQQE-VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
P + +++ E + ++GRLF+RN+ YT+ E++ R+ FS FG + EVH+ +D T +SKG
Sbjct: 328 VPQKTDEELAIEKINQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKG 387
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQ 399
AYVL+ P++A A LD IFQGRLLH++P KKS D+ +L N LK+
Sbjct: 388 FAYVLFKDPKNAVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNM------PLKK 441
Query: 400 RREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGET 459
++E +RKA+ AS T +WNSL+M D V+ ++A K G+ KS L+D E + AV+ AL E
Sbjct: 442 QKELKRKAA-ASRQTFSWNSLYMNQDAVLGSVAAKLGLEKSQLIDAENSSSAVKQALAEA 500
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
VI + +K + GV+ L +FS K+ +R + V LVKN P+ ++ EL +MF +G
Sbjct: 501 HVIGDVRKYFESKGVD---LTKFSQLKSTN-QRDDKVILVKNFPFGTTREELGEMFLPYG 556
Query: 520 SLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGN 579
L+++++P T+A+V F + A AAF L+YKR+K +YLE P D ++ + +
Sbjct: 557 KLERLLMPPAGTIAIVQFRDTTSARAAFTKLSYKRFKDGIIYLEKGPKDCFTKPAEADDL 616
Query: 580 QKNDAVVGEHD------AKRALLEQQ---LEGVTDADIDPDRVE--SRSLFVKNLNFKTC 628
N + E + + L+E EG ++A D D ++ + S+F+KNLNF T
Sbjct: 617 INNTSAKEEENPVEIKPSSNDLMEANKDVTEGSSNAH-DEDVIDGPTVSIFIKNLNFSTT 675
Query: 629 DENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTI 686
++NL F + G +++ VK K K+ GK +SMGFGF+EF + E A V + GT+
Sbjct: 676 NQNLTDKF--KVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDGTV 733
Query: 687 LDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+DGH + L+L H + + K + +K S K++V+N+ FEA RK
Sbjct: 734 IDGHKIQLKLSHRQASQSGNTKTKSNKKSGKIIVKNLPFEATRK 777
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG++ V+NLP+ AT ++ E F+ FG + V V K K ++G A+V + +P+ A A+
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAENAM 820
Query: 358 EVLDNSIFQGRLL 370
+ L GR L
Sbjct: 821 DQLHGVHLLGRRL 833
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 486 KTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEP 540
KT K+S + +VKNLP++++ ++ ++F FG L V +P S + A V FL P
Sbjct: 755 KTKSNKKSGKI-IVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLP 813
Query: 541 VEAAAAFKGLAYKRYKGVPLYLEW 564
EA A L G L +++
Sbjct: 814 KEAENAMDQLHGVHLLGRRLVMQY 837
>gi|392585482|gb|EIW74821.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 834
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 257/775 (33%), Positives = 393/775 (50%), Gaps = 94/775 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE----ITDAKLMRTKDGKSRQFAFIGFRTEQEAEE 56
SR+ VKNLP Y+T DRLR F QKG ITD K+ DG SR+F F+GF++E EA
Sbjct: 2 SRLIVKNLPTYLTPDRLRKHFEQKGAPAGTITDVKVSFKPDGTSRRFGFVGFKSEAEALR 61
Query: 57 AIKYFNKSYLDTCRISCEIA-------------------RKVGDPNMPRPWSRYSLKKEK 97
A ++FN++Y+D+ RI+ ++ + D PRP R L
Sbjct: 62 AKEWFNRTYVDSTRITVDVVDVRFSPLSLSAAVIVTLGWQGTKDAPAPRPNKRRRLDP-- 119
Query: 98 EVSEDEKNPVLA----------AKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWAN 147
EDE P A A K E TEN QL E++ +M+P+ K WAN
Sbjct: 120 -TPEDENAPSKANGGKVDKKKKANVAAGKEAEAGTENS--QLAEYMTLMKPK-KGPAWAN 175
Query: 148 DTLIGLMADQKAKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAA-ADELM 206
D + A A V + + A E+S S +N D + E S + DE +
Sbjct: 176 DAEVSHPA---APVPSSSTTAKATSEQS----KDSADANDPPDEEMAEPSPHVPDGDEAI 228
Query: 207 SDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIH 266
SDM++ + R+ + S+ +D+ EE+ + D N DS
Sbjct: 229 SDMEWMRRRMAAASTLSQPAEDA----------REEKAFYQSEDEDDNTRQDST------ 272
Query: 267 SGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVS 326
A E P + ++ +LE+ RLF+RNL ++ TE+E+REHF FGN+S
Sbjct: 273 ------KATPE------PEAEKDPAKETILETSRLFLRNLTFSCTEEEIREHFQPFGNIS 320
Query: 327 EVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQEL 386
+VHI +D T++ KG+AYV ++ SA A E LD FQGR+LH++PA + +Q
Sbjct: 321 QVHIPLDSSTRKPKGVAYVTFSEGASALSAYESLDKKSFQGRVLHILPAVDRIPKPEQPG 380
Query: 387 HNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE 446
+ +++K ++ +RK + +G W+ L+M D V+ ++A + VSK+D+LD E
Sbjct: 381 DDK----KRSVKDQKAAQRKVT--AGREFNWSMLYMNSDAVMSSVADRMNVSKADMLDPE 434
Query: 447 ANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGK-TDGLKRSNHVFLVKNLPYD 505
+++ AV++AL ET VI ETK L GV +S+ ++ S+G + ++RS+ LVKN+PY
Sbjct: 435 SSNAAVKMALAETHVIQETKAFLEQQGVVLSTFDDDSSGSGSKRVRRSDTTILVKNIPYG 494
Query: 506 SSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
+SE ++ +MF G L + I+P T+A+V FL EA AFK +AY+R +YLE
Sbjct: 495 TSEAQIREMFEPHGQLARAIVPPAGTIAVVEFLHADEAGKAFKAVAYRRLGNSVVYLEKG 554
Query: 566 PSDVLSQ----SSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVK 621
P +L S+S + A+ AK ++ Q G D +P +LFVK
Sbjct: 555 PLGMLRDPDDVPSSSAPATASLAISRGEAAKPVTIDDQEAGAGAGD-EPALSAGSTLFVK 613
Query: 622 NLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKN----VSMGFGFIEFDSVETATN 677
NL+F T + L + G + V+ K K + +SMG+GF+ F + E A
Sbjct: 614 NLSFATTNTRLSQACGA-LPGFAFARVQTKPDPKRPSDPTARLSMGYGFVGFKTPEHARG 672
Query: 678 VCRDLQGTILDGHALILQLCHAKKDE--QVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ +QG +LDGHAL ++ ++E Q K A +TK++V+NV FEA +K
Sbjct: 673 ALKSVQGLVLDGHALSVKFAGRGQEEVGQEGKGASSKGRTTKMIVKNVPFEASKK 727
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 124/312 (39%), Gaps = 50/312 (16%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+N+PY +E ++RE F G ++ IV T IA V + + A +A + +
Sbjct: 486 ILVKNIPYGTSEAQIREMFEPHGQLARA-IVPPAGT-----IAVVEFLHADEAGKAFKAV 539
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERK--------ASEASG 412
++++ D ++ +S++ T +L R E K A +G
Sbjct: 540 AYRRLGNSVVYLEKGPLGMLRDPDDVPSSSAPATASLAISRGEAAKPVTIDDQEAGAGAG 599
Query: 413 NTKAWN---SLFMRP---DTVVENIARKHGVSKSDLLDR--------EANDLAVRIALGE 458
+ A + +LF++ T +++ G R +D R+++G
Sbjct: 600 DEPALSAGSTLFVKNLSFATTNTRLSQACGALPGFAFARVQTKPDPKRPSDPTARLSMGY 659
Query: 459 TQVIAETKKALTNAGVNVSSL-----------------EEFSAGKTDGLKRSNHVFLVKN 501
V +T + A +V L E GK K +VKN
Sbjct: 660 GFVGFKTPEHARGALKSVQGLVLDGHALSVKFAGRGQEEVGQEGKGASSKGRTTKMIVKN 719
Query: 502 LPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLAYKRYK 556
+P+++S+ ++ ++FG G L V LP ++ A + FL EA A+ L +
Sbjct: 720 VPFEASKKDIRELFGAHGQLKSVRLPKKFDSRSRGFAFLEFLTRQEAENAYAALRHTHLL 779
Query: 557 GVPLYLEWAPSD 568
G L L+WA D
Sbjct: 780 GRHLVLQWAEED 791
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P ++ +R+ F G++ +L + D +SR FAF+ F T QEAE A
Sbjct: 713 TKMIVKNVPFEASKKDIRELFGAHGQLKSVRLPKKFDSRSRGFAFLEFLTRQEAENAYAA 772
Query: 61 FNKSYL 66
++L
Sbjct: 773 LRHTHL 778
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ VKN+ F+ +++R+ FG H G++ SV++ K + S GF F+EF + + A N
Sbjct: 715 MIVKNVPFEASKKDIRELFGAH---GQLKSVRLPKKFDS---RSRGFAFLEFLTRQEAEN 768
Query: 678 VCRDLQGTILDGHALILQLC 697
L+ T L G L+LQ
Sbjct: 769 AYAALRHTHLLGRHLVLQWA 788
Score = 39.3 bits (90), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ V+N+P+ A++ ++RE F G + V + D+ RS+G A++ + + A A
Sbjct: 714 KMIVKNVPFEASKKDIRELFGAHGQLKSVRLPKKFDS-RSRGFAFLEFLTRQEAENAYAA 772
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQG 393
L ++ GR L + A ++D L G
Sbjct: 773 LRHTHLLGRHLVLQWAEEDGATDVDALRAKAGVG 806
>gi|389743141|gb|EIM84326.1| hypothetical protein STEHIDRAFT_170049 [Stereum hirsutum FP-91666
SS1]
Length = 779
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 254/752 (33%), Positives = 390/752 (51%), Gaps = 103/752 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQK----GEITDAKLMRTKDGKSRQFAFIGFRTEQEAEE 56
SR+ VK LP Y+T DRL+++FSQ G ITD K+ +DG SR+F F+G++T+ EA +
Sbjct: 2 SRLIVKGLPTYITPDRLKEYFSQSKGPGGTITDVKVAHKQDGTSRRFGFVGYKTDAEAAK 61
Query: 57 AIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKK 116
A ++F+K++LDT R+ ++ D PRP R L + E A G K
Sbjct: 62 AKEWFDKTFLDTARVRVDVVDGAKDAPAPRPNKRPRLGPSPSEAASE------AALGPKT 115
Query: 117 TIEKVTENDDPQLLEFLQVMQPRV-KSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
+K +++ D QL EFLQVMQPR K WA+ A + E +
Sbjct: 116 NAKKSSKSKDSQLDEFLQVMQPRSRKGPSWAD--------------------APEAPEDT 155
Query: 176 ITLHVKSDKS--NVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDD-SAGD 232
T KSD+ + + SQ E+ E MSDM++ ++R+++D + E D
Sbjct: 156 ATQSKKSDRQAKSDVEKSQPVEEE----PPEGMSDMEWLRARMRQDVETAVPEKAFEQSD 211
Query: 233 DDDDDDGE----EEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSS 288
D++ D GE E++EEE DP
Sbjct: 212 DEEMDTGEALVPEQKEEERS-------------------------------DP------- 233
Query: 289 KDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYA 348
++ +L++ RLFVRNL + TEDELRE F FG +S++HI +D TK+ KG+AYV +
Sbjct: 234 --TKETILQTARLFVRNLAFACTEDELRELFRPFGEISQIHIPIDPKTKQPKGLAYVSFV 291
Query: 349 IPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKAS 408
P +A A E LD FQGRLLH++ A +K + E + K+LK R E++KA+
Sbjct: 292 QPTAALAAYETLDRKSFQGRLLHILGAVDRKGNIAVEDADGKK---KSLKDERGEKKKAT 348
Query: 409 EASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKA 468
+G W+ L+M D V+ ++A + +SKSD+LD E+ + AV++AL ET VI+ETK
Sbjct: 349 --AGKEFNWSMLYMNSDAVLSSVADRMNLSKSDILDPESPNAAVKLALAETHVISETKAY 406
Query: 469 LTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS 528
L + GV +SS + S+ T RS+ LVKN+PY ++ ++ +MF G L +V++P
Sbjct: 407 LESQGVILSSFSDSSSTPTTRTHRSDTTILVKNIPYGTTADQIREMFETHGELSRVLVPP 466
Query: 529 TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS-TSKGNQKNDA--- 584
T+A+V F+ P EA AF+ +AY+R +YLE P+ + + + ++G + D
Sbjct: 467 AGTMAVVEFVHPDEARKAFRAVAYRRLGNSVIYLEKGPAGMFQEPAEPAQGTKVADGVKP 526
Query: 585 VVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGR 644
V E DA + + ++ + +P +LFVKNL F T E L + F +H+
Sbjct: 527 VTVEDDATGSAIR-----ISADEEEPSMAAGSTLFVKNLAFSTTAERLNQVF-KHLPSFA 580
Query: 645 ILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDE 703
++ K K +SMG+GF+ F + E A + +QG +LDGHAL ++ +E
Sbjct: 581 FARIQTKPDPKRPNARLSMGYGFVGFKTTEGAKKALKGMQGYVLDGHALSVKFAGRGVEE 640
Query: 704 QVVKKAEKDKS-----STKLLVRNVAFEAQRK 730
E K +TK+LV+NV FEA +K
Sbjct: 641 DEAAGGEGAKKGGKSRTTKMLVKNVPFEATKK 672
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P T+ +R+ F G++ ++ + D ++R FAF+ F T QEAE A
Sbjct: 658 TKMLVKNVPFEATKKEIRELFGSHGQLKSVRVPKRFDHRTRGFAFLEFVTRQEAENAYNA 717
Query: 61 FNKSYLDTCRISCEIA 76
++L + E A
Sbjct: 718 LKHTHLLGRHLVLEWA 733
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLA 551
LVKN+P+++++ E+ ++FG G L V +P T+ A + F+ EA A+ L
Sbjct: 660 MLVKNVPFEATKKEIRELFGSHGQLKSVRVPKRFDHRTRGFAFLEFVTRQEAENAYNALK 719
Query: 552 YKRYKGVPLYLEWA 565
+ G L LEWA
Sbjct: 720 HTHLLGRHLVLEWA 733
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ VKN+ F+ + +R+ FG H G++ SV+V K + + GF F+EF + + A N
Sbjct: 660 MLVKNVPFEATKKEIRELFGSH---GQLKSVRVPKRFDH---RTRGFAFLEFVTRQEAEN 713
Query: 678 VCRDLQGTILDGHALILQLC 697
L+ T L G L+L+
Sbjct: 714 AYNALKHTHLLGRHLVLEWA 733
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ V+N+P+ AT+ E+RE F G + V + D R++G A++ + + A A
Sbjct: 659 KMLVKNVPFEATKKEIRELFGSHGQLKSVRVPKRFD-HRTRGFAFLEFVTRQEAENAYNA 717
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 718 LKHTHLLGRHL 728
>gi|190408039|gb|EDV11304.1| multiple RNA-binding domain-containing protein 1 [Saccharomyces
cerevisiae RM11-1a]
Length = 887
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 261/824 (31%), Positives = 423/824 (51%), Gaps = 142/824 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE---------------ITDAKLMRTKDGKSRQFAF 45
SRI K LP Y+T+D LR+ F+++ ITD K++R ++G+SR+F F
Sbjct: 2 SRIIAKGLPVYLTDDNLREHFTKRLRQKHSHQAVNGSGPDLITDVKILRDRNGESRRFGF 61
Query: 46 IGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKN 105
IG+R E++A +A++YFN S+++T +I +A+ DP +P+P + K E E+
Sbjct: 62 IGYRNEEDAFDAVEYFNGSFINTSKIEVSMAKSFADPRVPQPMKEKRREALKRFREKEEK 121
Query: 106 PVLAAKRGEKKTIEKVTENDD------PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKA 159
+ R +KK E N D QL EF++ M+P + W + + D+K
Sbjct: 122 LLQEENRKKKKVDENKHSNIDDEIRKNKQLQEFMETMKPSSQVTSWEKVGIDKSIEDEKL 181
Query: 160 KVSENISQAIKGGEKSITLHV--------KSDKSNVITDSQA------------------ 193
K E S +++G S+ H K + N++ ++++
Sbjct: 182 KREEEDS-SVQGN--SLLAHALALKDENNKDEAPNLVIENESDDEYSALNRNRDEDQEDA 238
Query: 194 ------------------------------TEKSKNAAADELMSDMDYFKS-RVKKDWSD 222
EK +N A DE +SD+D+FK RV+ S+
Sbjct: 239 GEEEKMISISNLKDTDIGLVNDDANSDEKENEKRRNLAQDEKVSDLDWFKQRRVRIKESE 298
Query: 223 SESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPG 282
+E+ + S+ + + NE D+ E +P
Sbjct: 299 AETREKSSS-----------------YATEQNESLDT--------------KKEEQPEPA 327
Query: 283 NPSSSSKDVQQE-VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
P + +++ E + ++GRLF+RN+ YT+ E++ R+ FS FG + EVH+ +D T +SKG
Sbjct: 328 VPQKTDEELAIEKINQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKG 387
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQ 399
AYVL+ P++A A LD IFQGRLLH++P KKS D+ +L N LK+
Sbjct: 388 FAYVLFKDPKNAVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNM------PLKK 441
Query: 400 RREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGET 459
++E +RKA+ AS T +WNSL+M D V+ ++A K G+ KS L+D E + AV+ AL E
Sbjct: 442 QKELKRKAA-ASRQTFSWNSLYMNQDAVLGSVAAKLGLEKSQLIDAENSSSAVKQALAEA 500
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
VI + +K + GV+ L +FS K+ +R + V LVKN P+ ++ EL +MF +G
Sbjct: 501 HVIGDVRKYFESKGVD---LTKFSQLKSTN-QRDDKVILVKNFPFGTTREELGEMFLPYG 556
Query: 520 SLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGN 579
L+++++P T+A+V F + A AAF L+YKR+K +YLE P D ++ + +
Sbjct: 557 KLERLLMPPAGTIAIVQFRDTTSARAAFTKLSYKRFKDGIIYLEKGPKDCFTKPAEADDL 616
Query: 580 QKNDAVVGEHD------AKRALLEQQ---LEGVTDADIDPDRVE--SRSLFVKNLNFKTC 628
N + E + + L+E EG ++A D D ++ + S+F+KNLNF T
Sbjct: 617 INNTSAKEEENPVEIKPSSNDLMEANKDVTEGSSNAH-DEDVIDGPTVSIFIKNLNFSTT 675
Query: 629 DENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTI 686
++NL F + G +++ VK K K+ GK +SMGFGF+EF + E A V + GT+
Sbjct: 676 NQNLTDKF--KVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDGTV 733
Query: 687 LDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+DGH + L+L H + + K + +K S K++V+N+ FEA RK
Sbjct: 734 IDGHKIQLKLSHRQASQSGNTKTKSNKKSGKIIVKNLPFEATRK 777
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG++ V+NLP+ AT ++ E F+ FG + V V K K ++G A+V + +P+ A A+
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAENAM 820
Query: 358 EVLDNSIFQGRLL 370
+ L GR L
Sbjct: 821 DQLHGVHLLGRRL 833
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 486 KTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEP 540
KT K+S + +VKNLP++++ ++ ++F FG L V +P S + A V FL P
Sbjct: 755 KTKSNKKSGKI-IVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLP 813
Query: 541 VEAAAAFKGLAYKRYKGVPLYLEW 564
EA A L G L +++
Sbjct: 814 KEAENAMDQLHGVHLLGRRLVMQY 837
>gi|323350239|gb|EGA84386.1| Mrd1p [Saccharomyces cerevisiae VL3]
Length = 887
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 257/824 (31%), Positives = 421/824 (51%), Gaps = 142/824 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE---------------ITDAKLMRTKDGKSRQFAF 45
SRI VK LP Y+T+D LR+ F+++ ITD K++R ++G+SR+F F
Sbjct: 2 SRIIVKGLPVYLTDDNLREHFTKRLRQKHSHQAVNGSGPDLITDVKILRDRNGESRRFGF 61
Query: 46 IGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKN 105
IG+R E++A +A++YFN S+++T +I +A+ D +P+P + K E E+
Sbjct: 62 IGYRNEEDAFDAVEYFNGSFINTSKIEVSMAKSFADXRVPQPMKEKRREALKRFREKEEK 121
Query: 106 PVLAAKRGEKKTIEKVTENDD------PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKA 159
+ R +KK E N D QL EF++ M+P + W + + D+K
Sbjct: 122 LLQEENRKKKKVDENKHSNIDDEIRKNKQLQEFMETMKPSSQVTSWEKVGIDKSIEDEKL 181
Query: 160 KVSENISQAIKGGEKSITLHV--------KSDKSNVITDSQA------------------ 193
K E S +++G S+ H K + N++ ++++
Sbjct: 182 KREEEDS-SVQGN--SLLAHALALNDENNKDEAPNLVIENESDDEYSALNRNRDEDQEDA 238
Query: 194 ------------------------------TEKSKNAAADELMSDMDYFKS-RVKKDWSD 222
EK +N A DE +SD+D+FK RV+ S+
Sbjct: 239 GEEEKMISISNLKDTDIGLVNDDANSDEKENEKRRNLAQDEKVSDLDWFKQRRVRIKESE 298
Query: 223 SESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPG 282
+E+ + S+ + + NE D+ E +P
Sbjct: 299 AETREKSSS-----------------YATEQNESLDT--------------KKEEQPEPA 327
Query: 283 NPSSSSKDVQQE-VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
P + +++ E + ++GRLF+RN+ YT+ E++ R+ FS FG + EVH+ +D T +SKG
Sbjct: 328 VPQKTDEELAIEKINQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKG 387
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQ 399
AYVL+ P++A A LD IFQGRLLH++P KKS D+ +L N LK+
Sbjct: 388 FAYVLFKDPKNAVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNM------PLKK 441
Query: 400 RREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGET 459
++E +RKA+ AS T +WNSL+M D V+ ++A K G+ KS L+D E + AV+ AL E
Sbjct: 442 QKELKRKAA-ASRQTFSWNSLYMNQDAVLGSVAAKLGLEKSQLIDAENSSSAVKQALAEA 500
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
VI + +K + GV+++ + + +R + V LVKN P+ ++ EL +MF +G
Sbjct: 501 HVIGDVRKYFESKGVDLTKFSQLKSTN----QRDDKVILVKNFPFGTTREELGEMFLPYG 556
Query: 520 SLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGN 579
L+++++P T+A+V F + A AAF L+YKR+K +YLE P D ++ + +
Sbjct: 557 KLERLLMPPAGTIAIVQFRDTTSARAAFTKLSYKRFKDGIIYLEKGPKDCFTKPAEADDL 616
Query: 580 QKNDAVVGEHD------AKRALLEQQ---LEGVTDADIDPDRVE--SRSLFVKNLNFKTC 628
N + E + + L+E EG ++A D D ++ + S+F+KNLNF T
Sbjct: 617 INNTSAKEEENPVEIKPSSNDLMEANKDVTEGSSNAH-DEDVIDGPTVSIFIKNLNFSTT 675
Query: 629 DENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTI 686
++NL F + G +++ VK K K+ GK +SMGFGF+EF + E A V + GT+
Sbjct: 676 NQNLTDKF--KVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDGTV 733
Query: 687 LDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+DGH + L+L H + + K + +K S K++V+N+ FEA RK
Sbjct: 734 IDGHKIQLKLSHRQASQSGNTKTKSNKKSGKIIVKNLPFEATRK 777
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG++ V+NLP+ AT ++ E F+ FG + V V K K ++G A+V + +P+ A A+
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAENAM 820
Query: 358 EVLDNSIFQGRLL 370
+ L GR L
Sbjct: 821 DQLHGVHLLGRRL 833
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 486 KTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEP 540
KT K+S + +VKNLP++++ ++ ++F FG L V +P S + A V FL P
Sbjct: 755 KTKSNKKSGKI-IVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLP 813
Query: 541 VEAAAAFKGLAYKRYKGVPLYLEW 564
EA A L G L +++
Sbjct: 814 KEAENAMDQLHGVHLLGRRLVMQY 837
>gi|6325369|ref|NP_015437.1| Mrd1p [Saccharomyces cerevisiae S288c]
gi|74676381|sp|Q06106.1|MRD1_YEAST RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|914983|gb|AAB68082.1| Ypr112cp [Saccharomyces cerevisiae]
gi|285815635|tpg|DAA11527.1| TPA: Mrd1p [Saccharomyces cerevisiae S288c]
gi|392296115|gb|EIW07218.1| Mrd1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 887
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 262/826 (31%), Positives = 425/826 (51%), Gaps = 146/826 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE---------------ITDAKLMRTKDGKSRQFAF 45
SRI VK LP Y+T+D LR+ F+++ ITD K++R ++G+SR+F F
Sbjct: 2 SRIIVKGLPVYLTDDNLREHFTKRLRQKHSHQAVNGSGPDLITDVKILRDRNGESRRFGF 61
Query: 46 IGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKN 105
IG+R E++A +A++YFN S+++T +I +A+ DP +P+P + K E E+
Sbjct: 62 IGYRNEEDAFDAVEYFNGSFINTSKIEVSMAKSFADPRVPQPMKEKRREALKRFREKEEK 121
Query: 106 PVLAAKRGEKKTIEKVTENDD------PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKA 159
+ R +KK E N D QL EF++ M+P + W + + D+K
Sbjct: 122 LLQEENRKKKKVDENKHSNIDDEIRKNKQLQEFMETMKPSSQVTSWEKVGIDKSIEDEKL 181
Query: 160 KVSENISQAIKGGEKSITLHV--------KSDKSNVITDSQA------------------ 193
K E S +++G S+ H K + N++ ++++
Sbjct: 182 KREEEDS-SVQGN--SLLAHALALKEENNKDEAPNLVIENESDDEYSALNRNRDEDQEDA 238
Query: 194 ------------------------------TEKSKNAAADELMSDMDYFKS-RVKKDWSD 222
EK +N A DE +SD+D+FK RV+ S+
Sbjct: 239 GEEEKMISISNLKDTDIGLVNDDANSDEKENEKRRNLAQDEKVSDLDWFKQRRVRIKESE 298
Query: 223 SESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPG 282
+E+ + S+ + + NE D+ ++ V
Sbjct: 299 AETREKSSS-----------------YATEQNESLDTKKEEQPERAV------------- 328
Query: 283 NPSSSSKDVQQE-VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
P + +++ E + ++GRLF+RN+ YT+ E++ R+ FS FG + EVH+ +D T +SKG
Sbjct: 329 -PQKTDEELAIEKINQTGRLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKG 387
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQ 399
AYVL+ ++A A LD IFQGRLLH++P KKS D+ +L N LK+
Sbjct: 388 FAYVLFKDSKNAVNAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNM------PLKK 441
Query: 400 RREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGET 459
++E +RKA+ AS T +WNSL+M D V+ ++A K G+ KS L+D E + AV+ AL E
Sbjct: 442 QKELKRKAA-ASRQTFSWNSLYMNQDAVLGSVAAKLGLEKSQLIDAENSSSAVKQALAEA 500
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
VI + +K + GV+ L +FS K+ +R + V LVKN P+ ++ EL +MF +G
Sbjct: 501 HVIGDVRKYFESKGVD---LTKFSQLKSTN-QRDDKVILVKNFPFGTTREELGEMFLPYG 556
Query: 520 SLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ------- 572
L+++++P T+A+V F + A AAF L+YKR+K +YLE P D ++
Sbjct: 557 KLERLLMPPAGTIAIVQFRDTTSARAAFTKLSYKRFKDGIIYLERGPKDCFTKPAEADDL 616
Query: 573 -SSTSKGNQKNDAVVGEHDAKRALLEQQ---LEGVTDADIDPDRVE--SRSLFVKNLNFK 626
++TS ++N V + L+E EG ++A D D ++ + S+F+KNLNF
Sbjct: 617 INNTSAKEEENPVEV--KPSSNDLMEANKDVTEGSSNAH-DEDVIDGPTVSIFIKNLNFS 673
Query: 627 TCDENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQG 684
T ++NL F + G +++ VK K K+ GK +SMGFGF+EF + E A V + G
Sbjct: 674 TTNQNLTDRF--KVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDG 731
Query: 685 TILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
T++DGH + L+L H + + K + +K S K++V+N+ FEA RK
Sbjct: 732 TVIDGHKIQLKLSHRQASQSGNTKTKSNKKSGKIIVKNLPFEATRK 777
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG++ V+NLP+ AT ++ E F+ FG + V V K K ++G A+V + +P+ A A+
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAENAM 820
Query: 358 EVLDNSIFQGRLL 370
+ L GR L
Sbjct: 821 DQLHGVHLLGRRL 833
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 486 KTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEP 540
KT K+S + +VKNLP++++ ++ ++F FG L V +P S + A V FL P
Sbjct: 755 KTKSNKKSGKI-IVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLP 813
Query: 541 VEAAAAFKGLAYKRYKGVPLYLEW 564
EA A L G L +++
Sbjct: 814 KEAENAMDQLHGVHLLGRRLVMQY 837
>gi|255726322|ref|XP_002548087.1| multiple RNA-binding domain-containing protein 1 [Candida
tropicalis MYA-3404]
gi|240134011|gb|EER33566.1| multiple RNA-binding domain-containing protein 1 [Candida
tropicalis MYA-3404]
Length = 846
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 253/733 (34%), Positives = 404/733 (55%), Gaps = 70/733 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LPKY TED+LR+ FS++G++TD KLM+ ++G+SR+FAFIG+++ + AE A+K+
Sbjct: 2 SRLIVKGLPKYFTEDKLREHFSKQGDVTDVKLMKKRNGESRRFAFIGYKSAEAAERAVKF 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSED-----EKNPVLAAKRGEK 115
FNKS++DT RI + A+ DP +P + + E+ + E+ E+ AKR +
Sbjct: 62 FNKSFVDTARIDVDFAKTFSDPTVPISFKEKRRRDEERLREEQERLIEQQNRADAKRQKV 121
Query: 116 KTIEKVTE--NDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKG-G 172
K + + +++P+L E+++VM+P + K WAND L AK ++ A+ G G
Sbjct: 122 KPSSSIDDEISNNPKLREYMEVMKPSHQVKSWANDALADGSGGPSAK---DLEDALNGTG 178
Query: 173 EKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGD 232
++ I K +V+T +++ A+D+ +D F ++ K+D + E + S D
Sbjct: 179 DEPID----RSKYDVVT-------AEDNASDDEYNDFKGFDNQ-KEDDEEEEEQMMSLSD 226
Query: 233 DDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQ 292
+ E EE+E+ + N ++ + D + S NGE+ P N S+DV+
Sbjct: 227 LPQEKKSEGEEQEKEEENLAADTNVSDL--DWLKSRSTRIKENGEV--PENEKEESQDVE 282
Query: 293 ---------------------QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
Q++ E+GRLF+RN+ Y ATE + ++ FS +G + EVHI
Sbjct: 283 KEEDANYEETEPELTPEEKTVQKIEETGRLFIRNISYDATEKDFKDLFSGYGPLEEVHIA 342
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNS 389
+D T +SKG Y + A RA LD IFQGRLLH++PA KK D+ +L N
Sbjct: 343 IDTRTGKSKGFVYAQFVKSSDAVRAYRSLDKQIFQGRLLHILPADKKKDHRLDEFDLKNL 402
Query: 390 TSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND 449
LK++RE ++KA +AS + +WNSL+M D V+E++A K GVSKS L+D E +
Sbjct: 403 ------PLKKQRELKKKA-QASKSQFSWNSLYMNSDAVLESVAAKLGVSKSQLIDPENSS 455
Query: 450 LAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEG 509
AV+ AL E VI + +K + GV++++ D +R + + LVKN P+ ++
Sbjct: 456 SAVKQALAEAHVIGDVRKYFEDRGVDLTTF--------DKKERDDKIILVKNFPFGTTID 507
Query: 510 ELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDV 569
E+ ++F +G L ++++P T+A+V F + A +AF LAYKR+K LYLE P D+
Sbjct: 508 EIGELFAAYGQLKRMLMPPAGTIAIVEFRDAPSARSAFTRLAYKRFKSTILYLEKGPKDL 567
Query: 570 LSQSSTSKGNQKNDAVVGEHDAKRALLE-QQLEGVTDADIDPDRVE--SRSLFVKNLNFK 626
++ T+ A E A A + ++ G + D + ++ + S+FVKNLNF
Sbjct: 568 FTREPTTNEVVNVPAEKEEQTAVEAKVSASEILGDVNEDDASEEIQGPTVSIFVKNLNFA 627
Query: 627 TCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGT 685
T + L F + + + +VK K KN GK +SMGFGF+EF + + A L G
Sbjct: 628 TTVQALSDVF-KGLPGFVVATVKTKPDPKNAGKTLSMGFGFVEFRTKDQANVAISTLDGH 686
Query: 686 ILDGHALILQLCH 698
+LDGH L L+L H
Sbjct: 687 VLDGHKLQLKLSH 699
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 622 NLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRD 681
NL F+ ++L + FG G++ SV+V K + GF F+EF+ ++ A
Sbjct: 725 NLPFEATRKDLLELFGAF---GQLKSVRVPKKFDQS---ARGFAFVEFNLMKEAETAMNQ 778
Query: 682 LQGTILDGHALILQLCHAKKD--------EQVVKKAEKDKSSTKL 718
L+G L G L++Q +A+KD E++ KK +K ++ L
Sbjct: 779 LEGVHLLGRRLVMQ--YAEKDAEDAEAEIERMTKKVKKQVATQNL 821
>gi|213403304|ref|XP_002172424.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212000471|gb|EEB06131.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 804
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 251/762 (32%), Positives = 402/762 (52%), Gaps = 93/762 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQK----GEITDAKLMRTKDGKSRQFAFIGFRTEQEAEE 56
SRI VKNLP + E++++ F+ + GEITD KL + +DG SR+FAF+GF+ ++A++
Sbjct: 2 SRIIVKNLPAFFDEEKIKQHFTSQSGYNGEITDVKLAKLRDGTSRRFAFLGFKNSEDAQD 61
Query: 57 AIKYFNKSYLDTCRISCEIARKVGDPNMP----RPWSRYSLKKEKEVSEDEKNPVLAAKR 112
A+K+FNK+++ T ++ ++A DP +P S++S ++ + + +L A+R
Sbjct: 62 AVKFFNKTFVCTSKLDVQLA---FDPRTADQRIKPKSKHSRVNVEQRQKKREEELLLAQR 118
Query: 113 G-------EKKTIEKVTE---NDDPQLLEFLQVMQPRVKSKMWANDT-LIGLMADQK--A 159
EKK K E D+ + EFL V + S+ W N T L+G ++ A
Sbjct: 119 AADQKEKAEKKNKRKHGEAEVKDETKFQEFLSVSKSLSTSRSWDNGTPLVGETQQEQTAA 178
Query: 160 KVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKD 219
V + ++ L ++ ++ V+T + N DE + ++R+K
Sbjct: 179 DVRAFEEEDDDEYQELPALKRRATEATVMTSITTAPAASNLTDDEWLR---LHRTRIK-- 233
Query: 220 WSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIV 279
+ A +D D + E D ++ D+ +++
Sbjct: 234 --------EQATEDHADPEAE-----------------DMLVDDAAEETTKKQEEQVVEE 268
Query: 280 DPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS 339
+P P+ K ++Q + ES RLF+RNL Y+ ED++ E F +G + +VH+ VDK T
Sbjct: 269 EPRVPTEEEKAIEQ-ISESKRLFLRNLTYSCQEDDIVELFQDYGALEQVHVPVDKKTNAP 327
Query: 340 KGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKS--SDKQELHNSTSQGTKTL 397
KG AYV + + A RA + LD FQGRLLH++PA+ + + D+Q H L
Sbjct: 328 KGFAYVEFKNKDDAIRAYQDLDGLAFQGRLLHILPAKSRTNIMQDEQAFHKL------PL 381
Query: 398 KQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALG 457
K++RE +RK + AS +T +WN+L+M D VV ++A + GV K+D+L+ ++D AV+ A+
Sbjct: 382 KKQRELKRKLA-ASASTFSWNTLYMGSDAVVSSLASRLGVKKADILNPTSSDAAVKQAMA 440
Query: 458 ETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGK 517
ET VI ETK GV+ LE F +RS+ V L KN PY ++ ELA+MFG+
Sbjct: 441 ETHVIQETKNFFEEHGVD---LEAFKNS-----QRSDSVILAKNFPYGTTAEELAEMFGE 492
Query: 518 FGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
FG L +V++P T+A++ FL +A AF LAYKR KG LYLE AP +V + + K
Sbjct: 493 FGELGRVLIPPAGTIAIIEFLNTPDARQAFAKLAYKRIKGSVLYLEKAPKNVFNTAVAKK 552
Query: 578 GN-----QKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENL 632
QK D + E+ A V +A +P E+ +LFVKN++F T +
Sbjct: 553 AGKPEVVQKIDGISTENKA----------AVDEAVTEPADGETSTLFVKNISFSTSQTDF 602
Query: 633 RKHFGEHIKEGRILSV-KVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHA 691
++ F G + +V + K + G+ +SMGFGF+EF S E A +QG +LDGH
Sbjct: 603 QRIFASL--NGFLSAVIRAKPSKRPGQLMSMGFGFVEFRSKEDAVTAMNAMQGFLLDGHK 660
Query: 692 LILQLCHAKKDEQV-VKKAEKDK--SSTKLLVRNVAFEAQRK 730
L ++L H D +KA++ + TK+L++N+ FEA +K
Sbjct: 661 LEIKLSHKGADAAAETRKADEKRHVKGTKILIKNLPFEATKK 702
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
L+KNLP+++++ ++ +FG +G L V +P + + A F+ EA A K L +
Sbjct: 691 LIKNLPFEATKKDVVSLFGAYGQLRSVRVPKKFDRTARGFAFAEFVTAREAENAMKALKH 750
Query: 553 KRYKGVPLYLEWAPS 567
G L L++A +
Sbjct: 751 THLLGRHLVLQYAST 765
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ + F G++ ++ + D +R FAF F T +EAE A+K
Sbjct: 688 TKILIKNLPFEATKKDVVSLFGAYGQLRSVRVPKKFDRTARGFAFAEFVTAREAENAMKA 747
Query: 61 FNKSYLDTCRISCEIARKVGDPNM 84
++L + + A G +M
Sbjct: 748 LKHTHLLGRHLVLQYASTAGLDDM 771
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
V+ + +KNL F+ +++ FG + G++ SV+V K + GF F EF +
Sbjct: 685 VKGTKILIKNLPFEATKKDVVSLFGAY---GQLRSVRVPKKFDR---TARGFAFAEFVTA 738
Query: 673 ETATNVCRDLQGTILDGHALILQLC 697
A N + L+ T L G L+LQ
Sbjct: 739 REAENAMKALKHTHLLGRHLVLQYA 763
>gi|254574096|ref|XP_002494157.1| Essential conserved protein that is part of the 90S preribosome
[Komagataella pastoris GS115]
gi|238033956|emb|CAY71978.1| Essential conserved protein that is part of the 90S preribosome
[Komagataella pastoris GS115]
Length = 810
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 253/778 (32%), Positives = 411/778 (52%), Gaps = 127/778 (16%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LPKY TED+L+ +FS++G+++D KLM+ + G+SR+FAFIG++ ++AE+A Y
Sbjct: 2 SRLIVKGLPKYYTEDKLKAYFSKQGDVSDVKLMKNRFGESRRFAFIGYKNAEDAEKAASY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
+N S++DT RIS E+A D N +E + +++ NP+ ++ E+
Sbjct: 62 YNDSFIDTARISVELAVTFADSNR---------LEEAPMKKNKTNPI-------REIDEQ 105
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLHV 180
+ + D +L +F+ ++P +++ WA+++ + + + +E + +A+
Sbjct: 106 IAK--DHKLRDFMNALRPGSQTQTWADNSAV---SGEGGPTNEALVEAL----------A 150
Query: 181 KSDKSNVITDSQATEK--------------------------------SKNAAADELMSD 208
K DKS TDS + S+ A AD+ M+D
Sbjct: 151 KRDKSEPTTDSAQHDPNVSDHASDDDYDDFQKSNEDNESEEEEEMIPLSEVAPADDSMTD 210
Query: 209 MDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEEN----DHNGDSNEECDSIIKDS 264
+++ R +K SD+ S + G D + +EEE +G ++ + + I
Sbjct: 211 LEWLIQR-RKRMSDNPSHKEQNGTKDTEHKRPGHDEEETTATQSQDGQTSSQQQTEI--- 266
Query: 265 IHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGN 324
+ EED N +I+ ++GRLFVRN+ YTATE E R+ FS +G
Sbjct: 267 VQEEESEEDQNIKIIS----------------QTGRLFVRNISYTATEAEFRQLFSTYGE 310
Query: 325 VSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--D 382
+ EVH+ +D T SKG YV + PE A A + LD IFQGRLLH++PA+ KK D
Sbjct: 311 LDEVHVAIDTRTGASKGFVYVKFQDPEQALEAYKSLDKQIFQGRLLHILPAQPKKDHRLD 370
Query: 383 KQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDL 442
+ ++ N LK++RE ++K +AS + +WNSL+M D V+ ++A K G+SK++L
Sbjct: 371 EFDIKNL------PLKKQRELKKKV-DASKSVFSWNSLYMNNDAVLSSVADKLGISKTEL 423
Query: 443 LDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNL 502
+D + + AV+ AL E VI + +K + GV+++ K D +R + V LVKN
Sbjct: 424 IDPQNSSSAVKQALAEAHVIGDVRKYFESKGVDLT--------KFDTKERDDKVILVKNF 475
Query: 503 PYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYL 562
PY +S E+ +F ++G L +V++P T+A+V F + +AF LAY+R+K +YL
Sbjct: 476 PYGTSLDEITDLFAQYGELKRVLMPPAGTIAVVEFRDAPSGRSAFTKLAYRRFKKSIIYL 535
Query: 563 EWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDAD-IDPDRVE------- 614
E P+ + ++ S N+ D V + + K T D +D D+ +
Sbjct: 536 EKGPTGLFTRDPNS--NEAPD-VAEKKEGKEV-------KATGGDLLDTDKSDEALTPSG 585
Query: 615 -SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSV 672
+ S+FVKNL+F T + L F + ++ + +VK K KN GK +SMGFGF+EF +
Sbjct: 586 PTVSVFVKNLSFSTTVQTLTDTF-KPLEGFTVATVKTKPDAKNPGKTLSMGFGFVEFRTK 644
Query: 673 ETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
E A L G LDGH L L+L H +K KKA K+S K++++N+ FEA RK
Sbjct: 645 EQAELAISTLDGKPLDGHRLQLKLSH-RKSGTNEKKARSSKTS-KIIIKNLPFEATRK 700
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S+I +KNLP T + + FS G + A++ + D +R FAF+ F +EAE+A+
Sbjct: 686 SKIIIKNLPFEATRKDIVELFSSFGHLKSARVPKKFDSSARGFAFVEFSLLKEAEQAMDQ 745
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDE 103
+L R+ E A++ + N R + K +K+V+ E
Sbjct: 746 LQGVHLLGRRLVMEYAQQDAE-NAEEEIERMTKKVQKQVASRE 787
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ ++ ++NLP+ AT ++ E FS FG++ + D+ ++G A+V +++ + A +A+
Sbjct: 685 TSKIIIKNLPFEATRKDIVELFSSFGHLKSARVPKKFDSS-ARGFAFVEFSLLKEAEQAM 743
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
+ L GR L + A+ + ++E+ T + K + R
Sbjct: 744 DQLQGVHLLGRRLVMEYAQQDAENAEEEIERMTKKVQKQVASR 786
>gi|403213912|emb|CCK68414.1| hypothetical protein KNAG_0A07610 [Kazachstania naganishii CBS
8797]
Length = 867
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 257/810 (31%), Positives = 398/810 (49%), Gaps = 137/810 (16%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQK----------GEITDAKLMRTKDGKSRQFAFIGFRT 50
SRI VK LP Y+T+D L+ F+++ ITD K+++ K+G+SR+FAFIGFR
Sbjct: 2 SRIIVKGLPTYLTDDGLKSHFNKRLISNHENTTDELITDVKILKDKNGQSRRFAFIGFRN 61
Query: 51 EQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSR-----YSLKKEKEVSEDEKN 105
E +A +A+ YFN SY++T ++ +A+ DP +P+ Y +E+E ++
Sbjct: 62 EADAHDAVNYFNGSYINTAKLEVSMAKSFADPGVPQSMREKKREAYKRMREREAQLAQEE 121
Query: 106 PVLAAKRGEKKTIEKVTEN------DDPQLLEFLQVMQPRVKSKMW-------------- 145
A + +K E + D QL EF++ M+P W
Sbjct: 122 ESARANKKQKNVPENTSRGIDAEIAKDKQLQEFIETMKPGAHVASWEKVGSNKTEETEST 181
Query: 146 -ANDTL------------IGLMADQKAKVSENIS--------------QAIKGGEKSITL 178
AND + + D+ A + E S QA +G E ++L
Sbjct: 182 IANDEADNAQGNLLLAHALAMKKDEPALLKETASDDEYEELNKKSTETQADEGDEPMMSL 241
Query: 179 HVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDD 238
+ + + N A DE +SD+D+FK R + D A +
Sbjct: 242 -------DQLDEGAVANSENNLAQDEKVSDLDWFKQRRVRI-------KDGANEPVKKPT 287
Query: 239 GEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQE-VLE 297
+EEEE D A E V+P P S ++V E + +
Sbjct: 288 QPQEEEEATD-------------------------AKPEYVEPAQPEKSEEEVALEKIGQ 322
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+GRLF+RN+ Y +TE + R+ FS FG + EVHI VD T +SKG AY+L+ P+ A +A
Sbjct: 323 TGRLFLRNILYNSTEQDFRDLFSPFGELEEVHIAVDIRTGKSKGFAYILFKNPKDAIQAY 382
Query: 358 EVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
LD IFQGRLLH++P KK+ D+ +L N LK++RE ++KA+ AS +
Sbjct: 383 IELDKQIFQGRLLHILPGESKKNHRLDEFDLKNM------PLKKQRELKKKAT-ASKQSF 435
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVN 475
+WNSL+M D V+ ++A K G+ KSDL+D E ++ AV+ AL E VI + +K GV+
Sbjct: 436 SWNSLYMNQDAVLASVANKLGMQKSDLIDAENSNSAVKQALAEAHVIGDVRKYFEAKGVD 495
Query: 476 VSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALV 535
++ + ++D R + V LVKN P+ ++ EL ++F FG L++++LP T+A+V
Sbjct: 496 LTKFLQMRT-QSD---RDDRVILVKNFPFGTNIEELGELFLPFGKLERLLLPPAGTIAIV 551
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAV---------- 585
+ + A AAF LAYKR+K +YLE P + ++ +T+ + +
Sbjct: 552 QYKDIPSARAAFTKLAYKRFKDGIIYLEKGPKNCFARDATADEAMEKETAPAVEIKPSVH 611
Query: 586 -VGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLR---KHFGEHIK 641
+ E + + + Q D ID V S+FVKNLNF T L K FG +
Sbjct: 612 DIMEGNKSKEEVSQDAHERDDDAIDGPTV---SIFVKNLNFSTTSVQLTDRFKKFGGFV- 667
Query: 642 EGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
+ VK K K G +SMGFGF+EF + E A V + G ++DGH + L+L H +
Sbjct: 668 ---VAQVKTKPDPKREGHTLSMGFGFVEFRTKEQANAVISAMDGEVIDGHKIQLKLSHRQ 724
Query: 701 KDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ + K+ S K++V+N+ FEA RK
Sbjct: 725 SNNTSSHGSNKNSKSGKIIVKNLPFEATRK 754
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG++ V+NLP+ AT ++ E F+ FG + V V K K ++G A+V + +P+ A A+
Sbjct: 739 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVR-VPKKFDKSTRGFAFVEFLLPKEAEDAM 797
Query: 358 EVLDNSIFQGRLL 370
+ L GR L
Sbjct: 798 DQLQGVHLLGRRL 810
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
+VKNLP++++ ++ ++F FG L V +P ST+ A V FL P EA A L
Sbjct: 743 IVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSTRGFAFVEFLLPKEAEDAMDQLQG 802
Query: 553 KRYKGVPLYLEW 564
G L +++
Sbjct: 803 VHLLGRRLVMQY 814
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+I VKNLP T + + F+ G++ ++ + D +R FAF+ F +EAE+A+
Sbjct: 741 KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSTRGFAFVEFLLPKEAEDAMDQL 800
Query: 62 NKSYLDTCRISCE 74
+L R+ +
Sbjct: 801 QGVHLLGRRLVMQ 813
>gi|393239414|gb|EJD46946.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 769
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 251/747 (33%), Positives = 391/747 (52%), Gaps = 107/747 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP Y+TE RLR+ F+ KG +TD K++ +DG SR+F F+G++TE++A +A++Y
Sbjct: 5 SRLIVKNLPSYLTESRLREHFAAKGLVTDVKVLYNQDGSSRRFGFVGYKTEEDARKALEY 64
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLA------AKRGE 114
F+++Y+ T +IS ++ + D PRP R L E +DE LA ++ +
Sbjct: 65 FDRTYVGTSKISVQVVQGTKDAPPPRPHKRPRL----EGPDDEAAAALATTFKSKSQTDK 120
Query: 115 KKTIEKVTENDD---PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKG 171
K +E + +D QL EF++VM+P K MW+N V ++ A
Sbjct: 121 KPAVEPPAKKNDKKGAQLDEFIKVMKPTKKGAMWSNGD----------DVPTPVAPA--- 167
Query: 172 GEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAG 231
+ + +V D A E+ E +SD+++ + R+K ++A
Sbjct: 168 ---------REETMDVEEDEAAPEE-----VPEGVSDLEWMQRRMK----------NTAL 203
Query: 232 DDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDV 291
DD+D ++ ++E D K S EE D
Sbjct: 204 DDEDHKAFQQSDDE------------DDAAKSKAKSKPAEE-------------PKPADE 238
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
+++ S RLFVRNL ++ TE +L+ HFS G + +VHI +D K SKG+A+V Y+ P+
Sbjct: 239 EEQDTPSARLFVRNLAFSCTESDLKSHFSAHGTLVQVHIPLDTANKTSKGLAFVTYSTPD 298
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
AS A E LD + FQGRLLH++PA ++++ T+TLKQ+RE +KA+ +
Sbjct: 299 EASAAREALDGTSFQGRLLHILPA-----IERRKPAAPADPKTQTLKQQREAAKKAN--A 351
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND---LAVRIALGETQVIAETKKA 468
G W L+M D V ++A + V KSD+L+ ++ D AV++AL ET VI ETKK
Sbjct: 352 GKEFNWAMLYMNADAVASSVAERMNVPKSDILNPDSADPTSAAVKLALAETHVITETKKY 411
Query: 469 LTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS 528
GV LE F+ G+T +RS+ + LVKN+PY ++ +L ++F G+L ++++P
Sbjct: 412 FEEHGV---VLESFATGRT---QRSSTIILVKNIPYGTTSAQLTELFAPHGALVRLLIPP 465
Query: 529 TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGE 588
T+A+V F EA +AFKG+AYKR +YLEWAP + + KG + VV
Sbjct: 466 AGTIAVVEFAHADEARSAFKGVAYKRLGSAVVYLEWAPQGMF-RPDAPKGKEDKGGVVRV 524
Query: 589 HDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS- 647
+ + ++ EG A +LFVKNL F T + LR +G + +
Sbjct: 525 EEKEVPVVAPAEEGEVKAGT--------TLFVKNLAFSTNSDALRAVVARM--QGFVFAR 574
Query: 648 VKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC-HAKKDEQV 705
V++K K G+ +SMG+GF+ F + + A LQG ILDGH L ++ ++DE
Sbjct: 575 VQMKPDPKRLGEMLSMGYGFVGFATADDAKRALEGLQGYILDGHELRVKFAGRGREDEAQ 634
Query: 706 VKK--AEKDKSSTKLLVRNVAFEAQRK 730
+ A K S K++V+NV FEA RK
Sbjct: 635 DSRDGAIGGKKSAKMIVKNVPFEATRK 661
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLA 551
+VKN+P++++ +L +FG G L V LP ++ A + F+ EA AF L
Sbjct: 649 MIVKNVPFEATRKDLRALFGAHGHLKSVRLPKKFNSRSRGFAFLEFVSHQEAEHAFATLR 708
Query: 552 YKRYKGVPLYLEWAPSD 568
+ + G L LEWA S+
Sbjct: 709 HTHFLGRHLVLEWASSE 725
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P T LR F G + +L + + +SR FAF+ F + QEAE A
Sbjct: 647 AKMIVKNVPFEATRKDLRALFGAHGHLKSVRLPKKFNSRSRGFAFLEFVSHQEAEHAFAT 706
Query: 61 FNKSYLDTCRISCEIARKVGD 81
++ + E A GD
Sbjct: 707 LRHTHFLGRHLVLEWASSEGD 727
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S + VKN+ F+ ++LR FG H G + SV++ K + S GF F+EF S +
Sbjct: 646 SAKMIVKNVPFEATRKDLRALFGAH---GHLKSVRLPKKFNS---RSRGFAFLEFVSHQE 699
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKDEQ 704
A + L+ T G L+L+ ++ D Q
Sbjct: 700 AEHAFATLRHTHFLGRHLVLEWASSEGDAQ 729
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++ V+N+P+ AT +LR F G++ V + K RS+G A++ + + A A
Sbjct: 646 SAKMIVKNVPFEATRKDLRALFGAHGHLKSVRL-PKKFNSRSRGFAFLEFVSHQEAEHAF 704
Query: 358 EVLDNSIFQGRLL 370
L ++ F GR L
Sbjct: 705 ATLRHTHFLGRHL 717
>gi|401623161|gb|EJS41268.1| mrd1p [Saccharomyces arboricola H-6]
Length = 886
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 261/830 (31%), Positives = 428/830 (51%), Gaps = 155/830 (18%)
Query: 1 SRICVKNLPKYVTEDRLRDFFS---------QKGE------ITDAKLMRTKDGKSRQFAF 45
SRI VK LP Y+T+D L++ F+ Q G ITD K++R ++G+SR+F F
Sbjct: 2 SRIIVKGLPVYLTDDNLKEHFTKRLRQKHSHQAGNGSGPDLITDVKILRDRNGESRRFGF 61
Query: 46 IGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKN 105
IG+R E++A +A+ YFN S+++T +I +A+ DP +P+P + K E+E+
Sbjct: 62 IGYRNEEDAFDAVDYFNGSFVNTSKIEVSMAKSFADPRVPQPMKERRREAFKRFRENEEK 121
Query: 106 PVLAAKRGEKKTIEKVTEND-------DPQLLEFLQVMQPRVKSKMWANDTLIGL----- 153
+L + +KK +E N + L EF++ M+P + W IG+
Sbjct: 122 -LLHEQNQKKKKLEDNKHNSIDEEISKNKHLQEFMETMKPSSQVTSWEK---IGIDKSKE 177
Query: 154 -MADQKAKVSENISQ--------AIKG--------------------------------- 171
DQK + ++ A+KG
Sbjct: 178 DKKDQKPEEDSSVQSNSLLAHALALKGDSGNDETPKIDIDNESDNEYSNFNTDKNEGTDD 237
Query: 172 ---GEKSITL-HVKSDKSNVITDSQA-----TEKSKNAAADELMSDMDYFKSR-VKKDWS 221
EK I+L ++++ +N++ DS +EK + A DE +SD+D+FK R ++ S
Sbjct: 238 DEEEEKMISLDNLENVDTNIVDDSTTNDEAESEKRRKLALDEQVSDLDWFKQRRIRIKES 297
Query: 222 DSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDP 281
+E+ ++S+ + D ++GV E+ V+P
Sbjct: 298 GAETRENSSLTTTEQKD---------------------------NAGVREKKQ----VEP 326
Query: 282 GNPSSSSKD-VQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
P + ++ +++ ++GRLF+RN+ YT+ E++ +E FS FG + EVH+ +D T +SK
Sbjct: 327 TVPQKTDEEQAIEKINKTGRLFLRNILYTSKEEDFKELFSSFGELEEVHVALDTRTGQSK 386
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLK 398
G AYVL+ P++A A LD IFQGRLLH++P KKS D+ +L N LK
Sbjct: 387 GFAYVLFKDPKNAVEAYVELDKQIFQGRLLHILPGEEKKSHRLDEFDLKNM------PLK 440
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGE 458
+++E +RKA+ AS T +WNSL+M D V+ ++A K G++KS L+D E + AV+ AL E
Sbjct: 441 KQKELKRKAA-ASKQTFSWNSLYMNQDAVLGSVAAKLGLAKSQLIDAENSSSAVKQALAE 499
Query: 459 TQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKF 518
VI + +K + GV+ L +FS K+ +R + V LVKN P+ ++ EL +MF +
Sbjct: 500 AHVIGDVRKYFESKGVD---LAKFSQLKSPS-QRDDRVILVKNFPFGTTREELGEMFVPY 555
Query: 519 GSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS---- 574
G L+++++P T+A++ F + A AAF L+YKR+K +YLE P D ++ +
Sbjct: 556 GKLERLLMPPAGTIAIIQFRDTTSARAAFTKLSYKRFKDGIIYLEKGPKDCFTKPANSDD 615
Query: 575 ----TSKGNQK--------NDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKN 622
+S +K ND + +++ Q E V D + S+F+KN
Sbjct: 616 LIDDSSAKEEKPVEIKPSLNDLMEVNNNSNEESTATQGEDVADG-------PTVSIFIKN 668
Query: 623 LNFKTCDENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCR 680
LNF T +++L F + G +++ VK K K+ GK +SMGFGF+EF + E A V
Sbjct: 669 LNFSTTNQDLSDRF--KVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIS 726
Query: 681 DLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ GT++DGH + L+L H + + K + +K S K++V+N+ FEA RK
Sbjct: 727 AMDGTVIDGHKIQLKLSHRQASQNNSTKTKSNKRSGKIIVKNLPFEATRK 776
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG++ V+NLP+ AT ++ E F+ FG + V V K K ++G A+V + +P+ A A+
Sbjct: 761 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAENAM 819
Query: 358 EVLDNSIFQGRLL 370
+ L GR L
Sbjct: 820 DQLHGVHLLGRRL 832
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 483 SAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVF 537
++ KT KRS + +VKNLP++++ ++ ++F FG L V +P S + A V F
Sbjct: 751 NSTKTKSNKRSGKI-IVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEF 809
Query: 538 LEPVEAAAAFKGLAYKRYKGVPLYLEW 564
L P EA A L G L +++
Sbjct: 810 LLPKEAENAMDQLHGVHLLGRRLVMQY 836
>gi|363752183|ref|XP_003646308.1| hypothetical protein Ecym_4446 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889943|gb|AET39491.1| hypothetical protein Ecym_4446 [Eremothecium cymbalariae
DBVPG#7215]
Length = 855
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 264/812 (32%), Positives = 410/812 (50%), Gaps = 152/812 (18%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE---------ITDAKLMRTKDGKSRQFAFIGFRTE 51
SRI VK LPKY+ EDRL+D F ++ + ITD KLM+ KDG+SR+FAF+GF+ E
Sbjct: 2 SRIIVKGLPKYLNEDRLQDHFYKRLQKVHSDTTNLITDVKLMKNKDGESRRFAFVGFKFE 61
Query: 52 QEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWS---RYSLKKEKE-----VSEDE 103
+A +A++YF+ S++DTC++ +A+ DP +P P R +LK+ +E + E++
Sbjct: 62 SDAFDAVEYFDGSFIDTCKLEVSMAKSFADPRVPVPMREKRREALKRLREREDKLLQENQ 121
Query: 104 KNPVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSE 163
+ K G I K + QL EF+ M+P + W
Sbjct: 122 RKHRKETKPGIDAEIAK-----NAQLQEFIDTMKPSNQVTSW------------------ 158
Query: 164 NISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDS 223
EK ++ + D +N + + K A DE D+D FK SD
Sbjct: 159 ---------EKVVSTNKVEDSNNGDDSNPLLKVLKGAEEDE---DVDMFK------LSDG 200
Query: 224 ESE------DDSAGDDDDDDDGEEEEE-------EENDHNGDSNEECDSIIKD------- 263
ES+ D + + D D EEE + E N D N D + D
Sbjct: 201 ESDEEYIDVDKTKMEQDVPVDQEEETKMMSLDTFENTQLNKDDNLAQDEGVSDLDWLKNR 260
Query: 264 SIHSGVGEEDANGEIVD---PGNPSSSSKDVQQE--------------VLESGRLFVRNL 306
+ GE+ A + PG P +++++ + SGRLF+RN+
Sbjct: 261 RVRIRDGEDQAAQASISSEVPGVPVQQQSEIEEKQVPPISDEEQCLSKIRASGRLFLRNI 320
Query: 307 PYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQ 366
YTA ED+ ++ F+ +G + E+HI VD T +SKG AYVL+ P+ A A LD IFQ
Sbjct: 321 LYTAKEDDFQQLFAPYGEIEEIHIAVDTRTGQSKGFAYVLFKNPDDAVNAYIELDKQIFQ 380
Query: 367 GRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRP 424
GRLLH++PA KKS D+ ++ N LK+++E +RKAS A+ +WNSL+M
Sbjct: 381 GRLLHILPADPKKSHRLDEFDIKNL------PLKKQKELKRKAS-AAQQIFSWNSLYMNQ 433
Query: 425 DTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSA 484
D ++ ++A K G+ KS L+D E + AV+ AL E VI + +K GV++++ +++
Sbjct: 434 DAILSSVASKLGMEKSQLIDPENSSSAVKQALAEAHVIGDVRKYFELRGVDLTAFQKYK- 492
Query: 485 GKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAA 544
+ R + + LVKN P+ ++ ELA++F FG L ++++P + T+A+V + + A
Sbjct: 493 ---NAFDRDDRIILVKNFPHGTTREELAELFLPFGKLLRLLMPPSGTIAIVQYRDVPSAR 549
Query: 545 AAFKGLAYKRYKGVPLYLEWAPSDVLSQSS---------TSKGNQK-------------- 581
AAF L+YKR+K LYLE P + S+++ T++ +K
Sbjct: 550 AAFSKLSYKRFKEGILYLEKGPKNCFSRNAEGDELVEDGTTEPEEKFKEAKATVDDVMAA 609
Query: 582 -NDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHI 640
+ + EHD L+ Q+ G T S+FVKNLNF T E+L F
Sbjct: 610 NRNETLNEHDD----LDTQVHGPT-----------TSIFVKNLNFSTKTEDLTDKFKSFA 654
Query: 641 KEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
G I++ +K K K GK SMGFGF+EF + E A V L+GT++DGH + L+L H
Sbjct: 655 --GFIVAQIKTKPDPKRKGKTQSMGFGFVEFRTKEQANAVISALEGTVIDGHKIQLKLSH 712
Query: 699 AKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ K ++K+ + K++V+N+ FEA RK
Sbjct: 713 RQGTASTAKTSKKNING-KIIVKNLPFEATRK 743
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+G++ V+NLP+ AT ++ E FS FG + V V K K ++G A+V + +P+ A A+
Sbjct: 728 NGKIIVKNLPFEATRKDIFELFSSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAENAM 786
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSD 382
+ L+ GR L VM ++S D
Sbjct: 787 DQLEGVHLLGRRL-VMQYAEQESED 810
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAA 545
K N +VKNLP++++ ++ ++F FG L V +P S + A V FL P EA
Sbjct: 725 KNINGKIIVKNLPFEATRKDIFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAEN 784
Query: 546 AFKGLAYKRYKGVPLYLEWA 565
A L G L +++A
Sbjct: 785 AMDQLEGVHLLGRRLVMQYA 804
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+I VKNLP T + + FS G++ ++ + D +R FAF+ F +EAE A+
Sbjct: 730 KIIVKNLPFEATRKDIFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQL 789
Query: 62 NKSYLDTCRISCEIA 76
+L R+ + A
Sbjct: 790 EGVHLLGRRLVMQYA 804
Score = 39.3 bits (90), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ VKNL F+ +++ + F G++ SV+V K + GF F+EF + A N
Sbjct: 731 IIVKNLPFEATRKDIFELFSSF---GQLKSVRVPKKFDKS---ARGFAFVEFLLPKEAEN 784
Query: 678 VCRDLQGTILDGHALILQLCHAKKD------EQVVKKAEKDKSSTKL 718
L+G L G L++Q + + E++ + +K ++TKL
Sbjct: 785 AMDQLEGVHLLGRRLVMQYAEQESEDAELQIEKMTNRMKKQVATTKL 831
>gi|367015674|ref|XP_003682336.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
gi|359749998|emb|CCE93125.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
Length = 855
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 265/789 (33%), Positives = 415/789 (52%), Gaps = 107/789 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQK-----------GE-ITDAKLMRTKDGKSRQFAFIGF 48
SRI VK LP Y+ + +LR+ F ++ GE ITD K+++ +DG+SR+FAFIG+
Sbjct: 2 SRIIVKGLPVYLDDAKLREHFVKRLINKNGNSRTAGELITDVKILKDRDGQSRRFAFIGY 61
Query: 49 RTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMP---RPWSRYSLK----KEKEVSE 101
R+E++A +A+ YF+ S+++T +I +A+ DP +P R R +LK KE+ + E
Sbjct: 62 RSEEDAFDAVNYFDGSFINTSKIEVAMAKSFADPRVPKSMREQRREALKRLREKEERLLE 121
Query: 102 DEKNPVLAAKRGEKK--TIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKA 159
D++ L +KK +I+ E D +L EF++ M+P + W L G +Q++
Sbjct: 122 DKQTKKLKTVHDKKKGHSIDAEVEKDQ-KLKEFIETMKPTSQVASWETPGLAGQNTEQES 180
Query: 160 KVSEN--ISQAIKGGE----KSITLHV--KSDKSNV----------------ITDSQATE 195
N ++QA+ E KS +V K D NV DS E
Sbjct: 181 GAPGNSLLAQALALKEDEENKSDEEYVDFKKDDQNVEEPEEQMVGLGDYEAEQQDSVNDE 240
Query: 196 KSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNE 255
K+ A DE +SD+D+FK R + DGE+E +++
Sbjct: 241 KTDELAKDETVSDLDWFKQRRVRIR-----------------DGEQEPVKQDG------- 276
Query: 256 ECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDEL 315
K + +E+ ++ N + K ++Q + +GRLF+RN+ Y++TE +
Sbjct: 277 ------KKPVEENEAQEEVVQAVIQEENKTDEDKAMEQ-ICRTGRLFLRNILYSSTEQDF 329
Query: 316 REHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA 375
R+ FS +G + EVHI +D T +SKG AYVL+ + A+ A LD IFQGRLLH++PA
Sbjct: 330 RQLFSPYGELEEVHIALDTRTGKSKGFAYVLFKNSKDAAEAYIALDKQIFQGRLLHILPA 389
Query: 376 RHKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIAR 433
KK D+ +L N LK+++E +RKA+ AS + AWNSL+M D V+ ++A
Sbjct: 390 DAKKDHRLDEFDLKNM------PLKKQKELKRKAT-ASKQSFAWNSLYMNQDAVLGSVAA 442
Query: 434 KHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRS 493
K G+ KS L+D E + AV+ AL E VI + +K + GV+++ + + +R
Sbjct: 443 KLGMQKSQLIDPENSSSAVKQALAEAHVIGDVRKYFESKGVDLTKFGQLK----NADQRD 498
Query: 494 NHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYK 553
N V LVKN P+ ++ EL +F FG L++ ++P T+A++ + + A AAF LAYK
Sbjct: 499 NRVILVKNFPFGTTIEELGDLFLPFGKLERFLMPPAGTIAIIQYRDVTSARAAFTKLAYK 558
Query: 554 RYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH--DAKRA------LLEQQLEGVTD 605
R+K +YLE P D ++S+ S ++ D+ GE D K L+E + TD
Sbjct: 559 RFKDGIIYLEMGPKDCFTRSAES--DETLDSQSGEEPKDVKEIEPSSHDLMEAKDLSKTD 616
Query: 606 ADIDPDRVE--SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVS 661
D D ++ + S+F+KNLNF T + L + F G +++ VK K KN K +S
Sbjct: 617 EDTLDDSIDGPTVSIFIKNLNFSTNSQQLTEVFRPFT--GFVVAQVKTKPDPKNKDKTLS 674
Query: 662 MGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVR 721
MGFGF EF + E A V + GT+L+GH L L++ H + K S K++V+
Sbjct: 675 MGFGFAEFRTKEQALAVISAVDGTVLNGHRLQLKISH-RAGASSNTSKSSSKKSGKIIVK 733
Query: 722 NVAFEAQRK 730
N+ FEA RK
Sbjct: 734 NLPFEATRK 742
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP+ AT ++ E FS FG++ V V K K ++G A+V + +P+ A A++ L
Sbjct: 730 IIVKNLPFEATRKDIFELFSSFGHLKSVR-VPKKFDKSARGFAFVEFLLPKEAENAMDQL 788
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQE 385
GR L VM ++S D ++
Sbjct: 789 QGVHLLGRRL-VMQYAEQESEDAED 812
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
+VKNLP++++ ++ ++F FG L V +P S + A V FL P EA A L
Sbjct: 731 IVKNLPFEATRKDIFELFSSFGHLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLQG 790
Query: 553 KRYKGVPLYLEWA 565
G L +++A
Sbjct: 791 VHLLGRRLVMQYA 803
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I VKNLP T + + FS G + ++ + D +R FAF+ F +EAE A+
Sbjct: 730 IIVKNLPFEATRKDIFELFSSFGHLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLQ 789
Query: 63 KSYLDTCRISCEIA 76
+L R+ + A
Sbjct: 790 GVHLLGRRLVMQYA 803
>gi|392563575|gb|EIW56754.1| hypothetical protein TRAVEDRAFT_127405 [Trametes versicolor
FP-101664 SS1]
Length = 784
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 249/745 (33%), Positives = 383/745 (51%), Gaps = 83/745 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQK----GEITDAKLMRTKDGKSRQFAFIGFRTEQEAEE 56
SR+ VKNLP Y+T++RLR +F G +TD KLM +DG SR F FIG+++ QEAE
Sbjct: 2 SRLIVKNLPAYLTQERLRKYFESSDGPGGTLTDVKLMLKRDGTSRCFGFIGYKSSQEAER 61
Query: 57 AIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEK-EVSEDEKNPVLAAKRGEK 115
A K+FN++++D+ RI +I + PRP R L EV E P +A K K
Sbjct: 62 AQKWFNRTFVDSSRIMVDIVEGAKNAPAPRPNKRPRLGPSPGEVDE----PKVAKKSSSK 117
Query: 116 KTIEKVTENDDPQLLEFLQVMQPRV-KSKMWANDTLIGLMADQKAKVSENISQAIKGGEK 174
+ D EFLQVMQPR K W ++ + + + + +K +K
Sbjct: 118 DKSQGA---GDALATEFLQVMQPRSQKGPSWKDEEPAQEPVASSSTSANSADKPLKKSKK 174
Query: 175 SITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDS--AGD 232
S T + D + +T+ Q + A E +SD+D+ K K +D E+ + + D
Sbjct: 175 SKT---QPDHVDGVTEDQ-----EPVTATEPVSDLDWLKRHTKTAVADVEANEKAFEQSD 226
Query: 233 DDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQ 292
D+ D + ++EE+ H D IH+
Sbjct: 227 DEPMQDADSDDEEQEPH------------LDPIHA------------------------- 249
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+L++ RLF+RNLP+T TEDELRE F ++G+VS+ H+++D TK+SKG+AY+ YA P+S
Sbjct: 250 -SILQTSRLFIRNLPFTCTEDELRELFQRYGDVSQAHLILDPATKQSKGLAYISYANPDS 308
Query: 353 ASRAIEVLDNSIFQGRLLHVMPA--RHKKSSDKQELHNSTSQG-TKTLKQRREEERKASE 409
A A E LD + FQGRLLH++PA R K +D + +G KTLKQ RE +RKA
Sbjct: 309 ALGAYEALDKTSFQGRLLHILPAVDRRGKEADAE------GEGKKKTLKQDREGKRKA-- 360
Query: 410 ASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKAL 469
+G W L+M D VV ++A + VSK+D+L+ E+++ AV++AL ET VI ETK L
Sbjct: 361 MAGKEFNWAMLYMNSDAVVSSVADRMNVSKADILNPESDNAAVKLALAETHVIQETKTFL 420
Query: 470 TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST 529
GV++++L+ + + RS+ + LVKN+PY +S ++ +F G L +V++P
Sbjct: 421 EQHGVDLAALDTTGSKRP---ARSDRIILVKNIPYGTSAADVRALFEPHGELRRVLVPPA 477
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH 589
TLA+V F + AF+ +AY+R +YLE P + + +
Sbjct: 478 GTLAVVEFTHADDGRKAFRAVAYRRLGNSVVYLEKGPDGMFITDEPM--TDAAEPITATG 535
Query: 590 DAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVK 649
A A + + +P +LFVKNL F T E L +H+ E V+
Sbjct: 536 SAPIAAPDAAVAEAKAGADEPALSAGTTLFVKNLAFSTTAEKLVAVM-QHLPEYAFARVQ 594
Query: 650 VKK-HLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKK 708
K + G +SMG+GF+ F + + A + + G +LDGH L + + E+
Sbjct: 595 TKPDPARPGARLSMGYGFVGFHTTDGAKRGLKSIDGMVLDGHKLSAKWA-GRGAEEADGA 653
Query: 709 AEKD---KSSTKLLVRNVAFEAQRK 730
A+K+ +TK++V+NV FEA +K
Sbjct: 654 ADKETVKARTTKMIVKNVPFEATKK 678
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P T+ +R+ F ++ ++ R D ++R FAF+ F T EAE A
Sbjct: 664 TKMIVKNVPFEATKKDIRELFGAHAQLKSVRVPRKFDHRTRGFAFLEFTTRHEAERAYAT 723
Query: 61 FNKSYL 66
++
Sbjct: 724 LRHTHF 729
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 267 SGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVS 326
+G G E+A+G + D + + ++ V+N+P+ AT+ ++RE F +
Sbjct: 643 AGRGAEEADG-----------AADKETVKARTTKMIVKNVPFEATKKDIRELFGAHAQLK 691
Query: 327 EVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLL 370
V + D R++G A++ + A RA L ++ F GR L
Sbjct: 692 SVRVPRKFD-HRTRGFAFLEFTTRHEAERAYATLRHTHFLGRHL 734
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
+VKN+P+++++ ++ ++FG L V +P T+ A + F EA A+ L
Sbjct: 666 MIVKNVPFEATKKDIRELFGAHAQLKSVRVPRKFDHRTRGFAFLEFTTRHEAERAYATLR 725
Query: 552 YKRYKGVPLYLEWA 565
+ + G L LEWA
Sbjct: 726 HTHFLGRHLVLEWA 739
>gi|367001456|ref|XP_003685463.1| hypothetical protein TPHA_0D03960 [Tetrapisispora phaffii CBS 4417]
gi|357523761|emb|CCE63029.1| hypothetical protein TPHA_0D03960 [Tetrapisispora phaffii CBS 4417]
Length = 872
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 263/790 (33%), Positives = 412/790 (52%), Gaps = 91/790 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE-------------ITDAKLMRTKDGKSRQFAFIG 47
SRI VK LP Y+T+D+L++ F + + ITD K+++ K+G SR+FAFIG
Sbjct: 2 SRIIVKGLPVYLTDDKLKEHFVARLKTTHPNTTSLVDSLITDVKILKDKNGTSRRFAFIG 61
Query: 48 FRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEK--- 104
F TE +A +AI+YFN S++DT RI A DPN P+ ++ K V E E+
Sbjct: 62 FLTEDDARDAIRYFNGSFIDTARIQVSEATSFADPNRPKSVKEKRMEALKRVREREQRLL 121
Query: 105 -----NPVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKA 159
N + + EK+ + QL EF++ M+P + W N ++ A
Sbjct: 122 EEEEANKKVKIDKNEKRHAIDAEIEKNKQLKEFMETMKPNSQVSSWENASVSTSTNPLLA 181
Query: 160 KVSENISQAIKGGEKSITLHVKSDKSN-VITDSQATEKSKNAA-------ADELMSDMDY 211
V G + H S K + ++ D ++ ++ ++ ADE M +D
Sbjct: 182 AVQNQDEDDRSNGSNPLLQHALSMKGDDIVADKESDDEYEDFNKPTTVEDADEQMVSLDN 241
Query: 212 FKSRVK--KDWSDSESEDDSAGDDDDDD------------DGEEEEEEENDHNGDSNEEC 257
F S + ++ S++E E + D+ D DGE EE + N ++
Sbjct: 242 FNSNTQDHQEVSNNEDEKNLGQDETVSDLDWLKQRRIRIRDGENEEAKPRPINKENEGGN 301
Query: 258 DSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLES-GRLFVRNLPYTATEDELR 316
D++ ++ I GV E P S +++ E + S GRLF+RN+ YT+TE + R
Sbjct: 302 DTVEEEKI-PGVEAE-----------PEKSQEELAIEKISSTGRLFLRNILYTSTEKDFR 349
Query: 317 EHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
+ F FG + EVH+ +D T +SKG AYVLY +A +A LD IFQGRLLH++P
Sbjct: 350 DLFEPFGELEEVHVALDTRTGQSKGFAYVLYKDSANAVQAYINLDKQIFQGRLLHILPGE 409
Query: 377 HKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARK 434
KKS D+ ++ N LK++RE +RK + AS T +WNSL+M D V+ ++A K
Sbjct: 410 SKKSHRLDEFDIKNM------PLKKQRELKRKDT-ASKQTFSWNSLYMNQDAVLGSVASK 462
Query: 435 HGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSN 494
G+ KS L+D E ++ AV+ AL E VI + +K + GV+++S FS ++ KR +
Sbjct: 463 LGIEKSQLIDAENSNSAVKQALAEAHVIGDVRKYFEDKGVDIAS---FSVLRSTN-KRDD 518
Query: 495 HVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKR 554
V LVKN P+ ++ EL+ +F FG +D+ ++P T+A++ + + A AAF+ LAYKR
Sbjct: 519 TVILVKNFPFGTTVEELSDLFLPFGKIDRFLMPPAGTIAIIQYRDVTSARAAFRSLAYKR 578
Query: 555 YKGVPLYLEWAPSDVLS---------QSSTSKGNQKND--AVVGE-HDAKRALLEQQLEG 602
+K +YLE PS+ + +SST K + + +G+ + K + E+Q
Sbjct: 579 FKSGIIYLEKGPSNCFTRDANATDGVESSTPKEEEVKEIKPSIGDMMEVKTSNNEEQ--D 636
Query: 603 VTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS-VKVKKHLK-NGKNV 660
TD +D V S+F+KNLNF T + L + F G I++ VK K K GK +
Sbjct: 637 STDNVVDGPTV---SIFIKNLNFSTTSQQLSQQFKNF--NGFIVAQVKTKSDPKIEGKIL 691
Query: 661 SMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLV 720
SMGFGF EF + E A + G+++DGH + ++L H ++ + K S K++V
Sbjct: 692 SMGFGFAEFKTKEQALAAISAMDGSVIDGHKIQIKLSH-RQGTASKSNVSQRKPSGKIIV 750
Query: 721 RNVAFEAQRK 730
+N+ FEA RK
Sbjct: 751 KNLPFEATRK 760
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG++ V+NLP+ AT ++ E FS FG + V V K K ++G A+V + +P+ A A+
Sbjct: 745 SGKIIVKNLPFEATRKDVFELFSSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAENAM 803
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKAS 408
+ L GR L + A+ + ++E+ T + K + R K+S
Sbjct: 804 DQLQGVHLLGRRLVIQYAQAEAVDAEEEISRMTKKARKQMATREYGSLKSS 854
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
+VKNLP++++ ++ ++F FG L V +P S + A V FL P EA A L
Sbjct: 749 IVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLQG 808
Query: 553 KRYKGVPLYLEWAPSDVL 570
G L +++A ++ +
Sbjct: 809 VHLLGRRLVIQYAQAEAV 826
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 30/203 (14%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEP-VEAAAAFKGLAYKRYK 556
+KNL + ++ +L++ F F I+ KT + +P +E G + +K
Sbjct: 650 FIKNLNFSTTSQQLSQQFKNFNGF---IVAQVKTKS-----DPKIEGKILSMGFGFAEFK 701
Query: 557 GVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESR 616
L+ S G +V+ H + L +Q G R S
Sbjct: 702 --------TKEQALAAISAMDG-----SVIDGHKIQIKLSHRQ--GTASKSNVSQRKPSG 746
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+ VKNL F+ +++ + F G++ SV+V K + GF F+EF + A
Sbjct: 747 KIIVKNLPFEATRKDVFELFSSF---GQLKSVRVPKKFDKS---ARGFAFVEFLLPKEAE 800
Query: 677 NVCRDLQGTILDGHALILQLCHA 699
N LQG L G L++Q A
Sbjct: 801 NAMDQLQGVHLLGRRLVIQYAQA 823
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+I VKNLP T + + FS G++ ++ + D +R FAF+ F +EAE A+
Sbjct: 747 KIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQL 806
Query: 62 NKSYLDTCRISCEIAR 77
+L R+ + A+
Sbjct: 807 QGVHLLGRRLVIQYAQ 822
>gi|156849149|ref|XP_001647455.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
gi|156118141|gb|EDO19597.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
Length = 863
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 258/774 (33%), Positives = 418/774 (54%), Gaps = 67/774 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQK------------GEITDAKLMRTKDGKSRQFAFIGF 48
SRI VK LP Y+T+D+L++ F+++ ITD K+++ K+G+SR+FAFIGF
Sbjct: 2 SRIIVKGLPVYLTDDKLKEHFTKRLIKKHGNTTHSNDLITDVKILKDKNGQSRRFAFIGF 61
Query: 49 RTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPR--------PWSRYSLKKEKEVS 100
R E +A + IKYFN S++DT +I +A+ DP +P+ + R ++EK +
Sbjct: 62 RNEDDALDCIKYFNGSFVDTAKIEVSMAKSFADPTVPQSMKEKRREAYKRLREREEKLLE 121
Query: 101 EDEKNPVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWAN----DTLIGLMAD 156
E K P + +K +I+ E D QL EF+Q M P + W N + LI + +
Sbjct: 122 EKSKKPK-PQQNNQKSSIDAEIEKDK-QLKEFIQTMNPTANTPSWENVSTSNPLINEVEE 179
Query: 157 QKAKVSENI-SQAIKGGEKSITLHVKSDKSNVITDSQA-TEKSKNAAADELMSDMDYFKS 214
+++ + +QA+ + + +SD V + A TE A +E M +D F
Sbjct: 180 NESESENPLLAQALALKDTEVVKDQESDDEYVDFKTTADTEGQDEEAKEEEMMSLDNFAD 239
Query: 215 RVKKDWSDSESEDDSAGDDD-------DDDDGEEEEEEENDHNGDSNEECDSIIKDSIHS 267
V +D +D+ ++DD D D +GE +++ EE + ++ ++
Sbjct: 240 NVNEDDADNIAQDDKVSDLDWFKQRRVRIREGENVPVKQSQSKSADAEELN---QEELNQ 296
Query: 268 GVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSE 327
ED N V+P ++ + + Q++ ++GRLF+RN+ Y +TE + FS FG + E
Sbjct: 297 EEANEDENE--VEPD--TTEEEKIIQKITKTGRLFLRNILYNSTEQDFERLFSPFGELEE 352
Query: 328 VHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQE 385
VHI +D T +SKG AY+L+ P+ A +A LD IFQGRLLH++ A KKS D+ +
Sbjct: 353 VHIAIDTRTGQSKGFAYILFKDPKDAVQAYIELDKQIFQGRLLHILAADAKKSHRLDEFD 412
Query: 386 LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDR 445
L N LK+++E +RK + AS T +WNSL+M D V+ ++A K G+ KS L+D
Sbjct: 413 LKNM------PLKKQKELKRKDT-ASRQTFSWNSLYMNQDAVLSSVANKLGIEKSQLIDA 465
Query: 446 EANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYD 505
E ++ AV+ AL E VI + +K GV+++ E + + K+ + V LVKN P+
Sbjct: 466 ENSNSAVKQALAEAHVIGDVRKYFEVRGVDLAKFAEMRSTE----KKDDTVILVKNFPFG 521
Query: 506 SSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
++ EL ++F FG L+++++P T+A+V + + A AF LAYKR+K +YLE
Sbjct: 522 TTREELGELFLPFGKLERLLMPPAGTIAIVQYRDVPSAKKAFMKLAYKRFKDTIIYLEKG 581
Query: 566 PSDVLSQSSTSKGNQKNDAVVGEH--DAKRAL--LEQQLEGVTDADIDPDRVE---SRSL 618
P + ++ + ND + E +AK ++ + + E +AD D + + S+
Sbjct: 582 PKNCFTREAQDSDTLVNDDLPAEEIKEAKPSVSDIMETTESSNNADDTADDIHDGPTVSI 641
Query: 619 FVKNLNFKTCDENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETAT 676
F+KNLNF T + L + F G +++ V+ K K+ GK SMGFGF EF + E A
Sbjct: 642 FIKNLNFTTTTQQLTQRFNAF--NGFVVAQVRTKPDPKHQGKTQSMGFGFAEFRTKEQAL 699
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
V + GT++DGH + L+L H + K+ K K S K++V+N+ FEA RK
Sbjct: 700 AVISAVDGTVIDGHKVQLKLSHRQGGSTGTSKS-KGKQSGKIIVKNLPFEATRK 752
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+SG++ V+NLP+ AT ++ + FS FG + V V K K ++G A++ + +P+ A A
Sbjct: 736 QSGKIIVKNLPFEATRKDIFDLFSSFGQLKSVR-VPKKFDKSARGFAFIEFLLPKEAENA 794
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
++ L GR L + A+ + + ++E+ T + K + R
Sbjct: 795 MDQLQGVHLLGRRLVMQYAQEEAVNAEEEISRMTQKARKQMATR 838
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+I VKNLP T + D FS G++ ++ + D +R FAFI F +EAE A+
Sbjct: 739 KIIVKNLPFEATRKDIFDLFSSFGQLKSVRVPKKFDKSARGFAFIEFLLPKEAENAMDQL 798
Query: 62 NKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDE 103
+L R+ + A++ N SR + K K+++ E
Sbjct: 799 QGVHLLGRRLVMQYAQEEA-VNAEEEISRMTQKARKQMATRE 839
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 483 SAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVF 537
S G + + + +VKNLP++++ ++ +F FG L V +P S + A + F
Sbjct: 726 STGTSKSKGKQSGKIIVKNLPFEATRKDIFDLFSSFGQLKSVRVPKKFDKSARGFAFIEF 785
Query: 538 LEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL-SQSSTSKGNQK 581
L P EA A L G L +++A + + ++ S+ QK
Sbjct: 786 LLPKEAENAMDQLQGVHLLGRRLVMQYAQEEAVNAEEEISRMTQK 830
>gi|255716874|ref|XP_002554718.1| KLTH0F11968p [Lachancea thermotolerans]
gi|238936101|emb|CAR24281.1| KLTH0F11968p [Lachancea thermotolerans CBS 6340]
Length = 879
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 263/804 (32%), Positives = 407/804 (50%), Gaps = 114/804 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQ------KGE-----ITDAKLMRTKDGKSRQFAFIGFR 49
SR+ VK LPKY+T+D+L+D FS+ KG ITD K+++ + G+SR+FAF+GFR
Sbjct: 2 SRVIVKGLPKYLTDDQLKDHFSKRLAHLHKGADVTEAITDVKILKNRAGESRRFAFVGFR 61
Query: 50 TEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWS---RYSLKKEKEVSEDEKNP 106
+E++A +A+ YF++S++ TC+I +A+ DP +P+P R +LK+ +E ED+
Sbjct: 62 SEEDAFDAVNYFDQSFIHTCKIEVTMAKSFADPRVPQPMREKRREALKRLRE-REDQLLE 120
Query: 107 VLAAKRGEKKTIEKVTENDDP------QLLEFLQVMQPRVKSKMWAN------------- 147
AK+ +K+ + D QL EF+ M+P + W N
Sbjct: 121 EKTAKKLQKQKRDSSKPGIDAEIKSNKQLQEFIDTMKPSSQVASWDNLGGAVKSAPSNQL 180
Query: 148 ----DTLIG--LMADQKAKVSENI-SQAIKGGE-----KSITLHVKS---------DKSN 186
D G L+A A SE+ Q + E + TL + ++
Sbjct: 181 AVQADAPQGNSLLAQALAMKSEDKEPQGFRAQENESDDEYTTLDGQKGQGDDGGTEEEQM 240
Query: 187 VITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEE 246
V D+ +N A D+ +SD D+ K R + E +++S G G E+
Sbjct: 241 VKLDNFNEPAGENIAQDQEVSDFDWLKQRRTRI---KEQQENSVGA------GTAPEKPT 291
Query: 247 NDHNGDSNEECDSIIKDSIHSGVGEEDANGE--IVDPGNPSSSSKDVQQEVLESGRLFVR 304
D E ED E +P +S + Q++ +GRLF+R
Sbjct: 292 ETTQVDEPTETPPA-----------EDKEPEQSPAEPPMDTSEEEKFIQKIRTTGRLFLR 340
Query: 305 NLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSI 364
N+ YTATE++ + + FG + EVH+ +D T +SKG AYV++ PE A A LD I
Sbjct: 341 NILYTATEEDFKGLLAPFGELEEVHVALDTRTGKSKGFAYVMFRNPEDAVNAYVELDKHI 400
Query: 365 FQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFM 422
FQGRLLH++PA KKS D+ +L N LK++R +RKA+ A+ T +WNSL+M
Sbjct: 401 FQGRLLHILPADAKKSHRLDEFDLKNL------PLKKQRALKRKAN-AAHETFSWNSLYM 453
Query: 423 RPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEF 482
+ V+ ++A K GV KSDL+D AV+ AL E VI + +K + G++++ E
Sbjct: 454 NQNAVLGSVAAKLGVQKSDLIDATDASAAVKQALAEAHVIGDVRKYFESKGMDLAKFAEM 513
Query: 483 SAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVE 542
+ R + V LVKN P+ ++ ELA++F FG L +++LP +T+A+V + +
Sbjct: 514 KSPN----DRDDTVLLVKNFPFGTTHSELAELFLPFGKLLRLLLPPAQTIAVVQYRDATS 569
Query: 543 AAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEG 602
A AAF L+YKR+K LYLE P K + + D +V H+ ++ ++
Sbjct: 570 ARAAFTKLSYKRFKDGILYLEKGPKGCF------KRDPEGDEIVDLHEEPQSATAREARA 623
Query: 603 VTDADIDPDRVESR--------------SLFVKNLNFKTCDENLRKHFGEHIKEGRILS- 647
D ++ D+ + + S+FVKNLNF T + L + F G +++
Sbjct: 624 TGDEIMEVDKDDKQDEDGTDDVLDGPTVSIFVKNLNFSTTTKELTEKFKPF--SGFVVAQ 681
Query: 648 VKVKKHLKNG-KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV 706
VK K KN K +SMGFGF EF + E A V L G +LDGH + L+L H +
Sbjct: 682 VKTKPDPKNANKTLSMGFGFAEFKTKEQAVAVIDALDGAVLDGHRIQLKLSHRQGSAAPT 741
Query: 707 KKAEKDKSSTKLLVRNVAFEAQRK 730
K KSS K++V+N+ FEA+RK
Sbjct: 742 SGQSKKKSSGKIVVKNLPFEAERK 765
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG++ V+NLP+ A ++ E FS FG + V V K K ++G A+V + +P+ A A+
Sbjct: 750 SGKIVVKNLPFEAERKQVFELFSSFGQLKSVR-VPKKFDKSTRGFAFVEFLLPKEAENAM 808
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQE 385
E L GR L VM ++ D +E
Sbjct: 809 EQLQGVHLLGRRL-VMQHAEQEPQDAEE 835
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 483 SAGKTDGL--KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALV 535
SA T G K+S+ +VKNLP+++ ++ ++F FG L V +P ST+ A V
Sbjct: 737 SAAPTSGQSKKKSSGKIVVKNLPFEAERKQVFELFSSFGQLKSVRVPKKFDKSTRGFAFV 796
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWA---PSDVLSQ 572
FL P EA A + L G L ++ A P D Q
Sbjct: 797 EFLLPKEAENAMEQLQGVHLLGRRLVMQHAEQEPQDAEEQ 836
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+I VKNLP ++ + FS G++ ++ + D +R FAF+ F +EAE A++
Sbjct: 752 KIVVKNLPFEAERKQVFELFSSFGQLKSVRVPKKFDKSTRGFAFVEFLLPKEAENAMEQL 811
Query: 62 NKSYLDTCRISCEIA 76
+L R+ + A
Sbjct: 812 QGVHLLGRRLVMQHA 826
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S + VKNL F+ + + + F G++ SV+V K + GF F+EF +
Sbjct: 750 SGKIVVKNLPFEAERKQVFELFSSF---GQLKSVRVPKKFDKS---TRGFAFVEFLLPKE 803
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKDEQ 704
A N LQG L G L++Q HA+++ Q
Sbjct: 804 AENAMEQLQGVHLLGRRLVMQ--HAEQEPQ 831
>gi|336387594|gb|EGO28739.1| hypothetical protein SERLADRAFT_459485 [Serpula lacrymans var.
lacrymans S7.9]
Length = 780
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 239/744 (32%), Positives = 381/744 (51%), Gaps = 86/744 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE----ITDAKLMRTKDGKSRQFAFIGFRTEQEAEE 56
SR+ VKN+P YVT RLR F QKG ITD K+ DG SR+F F+GF+T++EA
Sbjct: 2 SRLIVKNIPPYVTPARLRQHFEQKGAPGGTITDIKVSFKPDGTSRRFGFVGFKTDKEAST 61
Query: 57 AIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKK 116
A +F+++++D+ RI+ + D PRP R + K+ D + + E
Sbjct: 62 AKDWFDRTFIDSTRINVVVVEASKDAPTPRPNKRRRMDSSKDDHPDIRESKPIQSKNETA 121
Query: 117 TIEKVTENDDPQLLEFLQVMQPRVK-SKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
V E DP L EF++VMQPR K WAN+ + +QA+
Sbjct: 122 ASNPVKEKSDPNLDEFMKVMQPRTKKGPSWANE-------------ASQHNQAL------ 162
Query: 176 ITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDD 235
+ V V ++Q ++ KN DE +SD+D+ K R+ + + ++ DD
Sbjct: 163 LPPVVDVTPVPVEENNQEGDEGKN---DEGISDLDWMKRRMTQKMDNINLQERVFQQSDD 219
Query: 236 DDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEV 295
+D E+ D N ++ + + EE+ DP ++ +
Sbjct: 220 ED-------EDRDMNAEN------------QTAIPEEEK-----DP---------TKETI 246
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L++ RLF+RNL ++ T+ EL E F FG +S+VHI +D TK+ KG+AYV ++ +A
Sbjct: 247 LQTSRLFLRNLAFSCTDSELMELFQPFGEISQVHIPLDPRTKQPKGLAYVTFSESSAALA 306
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQG-TKTLKQRREEERKASEASGNT 414
A E LD FQGRLLH++PA +K ++ + +G K+LK ++ +RKAS +G
Sbjct: 307 AYEALDKKSFQGRLLHILPAVTRKG----KIQDEDQEGKKKSLKGEKDAKRKAS--AGRE 360
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGV 474
W+ L+M D VV ++A + ++KSD+L+ E+++ AV++AL ET +I ETK + GV
Sbjct: 361 FNWSMLYMNSDAVVSSVADRMNIAKSDILNPESDNAAVKLALAETHIIQETKTYFESQGV 420
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLAL 534
+SS FS+ RS+ LVKN+PY ++ ++ +MF G L +V+LP T+A+
Sbjct: 421 VLSS---FSSK-----ARSDTTILVKNIPYGTTAEQIREMFEPHGQLSRVLLPPAGTMAV 472
Query: 535 VVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRA 594
V F P EA+ AF+ +AY+R +YLE P + Q + +
Sbjct: 473 VEFAHPDEASKAFRAVAYRRLGNSVVYLEKGPLGMF-QDTGDTNEPTGQPKISTSFKPVT 531
Query: 595 LLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL 654
+ EQ+ +G D D +P +LFVKN++F T + + F ++ V+ K
Sbjct: 532 ISEQEADG-PDGDDEPSLSAGSTLFVKNISFSTTSDRFTQVF-RNLPSFAFARVQTKPDP 589
Query: 655 KN-------GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVK 707
K +SMG+GF+ F + + A + +QG +LDGHAL ++ +E K
Sbjct: 590 KRPAVPGVEAPRLSMGYGFVGFKTADAAQKALKSMQGFVLDGHALHVKFAGRGAEEDEGK 649
Query: 708 KAEKDKS-STKLLVRNVAFEAQRK 730
K KS +TK++V+N+ FEA +K
Sbjct: 650 DKGKTKSNTTKMIVKNMPFEATKK 673
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P T+ +R+ F G++ +L + D +SR FAF+ F T EAE A
Sbjct: 659 TKMIVKNMPFEATKKDIRELFGAHGQLKSVRLPKKFDSRSRGFAFLEFVTRHEAENAYAM 718
Query: 61 FNKSYL 66
++L
Sbjct: 719 LRHTHL 724
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ VKN+ F+ +++R+ FG H G++ SV++ K + S GF F+EF + A N
Sbjct: 661 MIVKNMPFEATKKDIRELFGAH---GQLKSVRLPKKFDS---RSRGFAFLEFVTRHEAEN 714
Query: 678 VCRDLQGTILDGHALILQLC-HAKKDEQVVKK 708
L+ T L G L+LQ ++D V++K
Sbjct: 715 AYAMLRHTHLLGRHLVLQWAEEGEQDLDVLRK 746
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 485 GKTDGLKRSNHV-FLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFL 538
GK G +SN +VKN+P+++++ ++ ++FG G L V LP ++ A + F+
Sbjct: 648 GKDKGKTKSNTTKMIVKNMPFEATKKDIRELFGAHGQLKSVRLPKKFDSRSRGFAFLEFV 707
Query: 539 EPVEAAAAFKGLAYKRYKGVPLYLEWA 565
EA A+ L + G L L+WA
Sbjct: 708 TRHEAENAYAMLRHTHLLGRHLVLQWA 734
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ V+N+P+ AT+ ++RE F G + V + D+ RS+G A++ + A A +
Sbjct: 660 KMIVKNMPFEATKKDIRELFGAHGQLKSVRLPKKFDS-RSRGFAFLEFVTRHEAENAYAM 718
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 719 LRHTHLLGRHL 729
>gi|336364271|gb|EGN92632.1| hypothetical protein SERLA73DRAFT_190814 [Serpula lacrymans var.
lacrymans S7.3]
Length = 780
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 239/744 (32%), Positives = 381/744 (51%), Gaps = 86/744 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE----ITDAKLMRTKDGKSRQFAFIGFRTEQEAEE 56
SR+ VKN+P YVT RLR F QKG ITD K+ DG SR+F F+GF+T++EA
Sbjct: 2 SRLIVKNIPPYVTPARLRQHFEQKGAPGGTITDIKVSFKPDGTSRRFGFVGFKTDKEAST 61
Query: 57 AIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKK 116
A +F+++++D+ RI+ + D PRP R + K+ D + + E
Sbjct: 62 AKDWFDRTFIDSTRINVVVVEASKDAPTPRPNKRRRMDSSKDDHPDIRESKPIQSKNETA 121
Query: 117 TIEKVTENDDPQLLEFLQVMQPRVK-SKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
V E DP L EF++VMQPR K WAN+ + +QA+
Sbjct: 122 ASNPVKEKSDPNLDEFMKVMQPRTKKGPSWANE-------------ASQHNQAL------ 162
Query: 176 ITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDD 235
+ V V ++Q ++ KN DE +SD+D+ K R+ + + ++ DD
Sbjct: 163 LPPVVDVTPVPVEENNQEGDEGKN---DEGISDLDWMKRRMTQKMDNINLQERVFQQSDD 219
Query: 236 DDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEV 295
+D E+ D N ++ + + EE+ DP ++ +
Sbjct: 220 ED-------EDRDMNAEN------------QTAIPEEEK-----DP---------TKETI 246
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L++ RLF+RNL ++ T+ EL E F FG +S+VHI +D TK+ KG+AYV ++ +A
Sbjct: 247 LQTSRLFLRNLAFSCTDSELMELFQPFGEISQVHIPLDPRTKQPKGLAYVTFSESSAALA 306
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQG-TKTLKQRREEERKASEASGNT 414
A E LD FQGRLLH++PA +K ++ + +G K+LK ++ +RKAS +G
Sbjct: 307 AYEALDKKSFQGRLLHILPAVTRKG----KIQDEDQEGKKKSLKGEKDAKRKAS--AGRE 360
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGV 474
W+ L+M D VV ++A + ++KSD+L+ E+++ AV++AL ET +I ETK + GV
Sbjct: 361 FNWSMLYMNSDAVVSSVADRMNIAKSDILNPESDNAAVKLALAETHIIQETKTYFESQGV 420
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLAL 534
+SS FS+ RS+ LVKN+PY ++ ++ +MF G L +V+LP T+A+
Sbjct: 421 VLSS---FSSK-----ARSDTTILVKNIPYGTTAEQIREMFEPHGQLSRVLLPPAGTMAV 472
Query: 535 VVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRA 594
V F P EA+ AF+ +AY+R +YLE P + Q + +
Sbjct: 473 VEFAHPDEASKAFRAVAYRRLGNSVVYLEKGPLGMF-QDTGDTNEPTGQPKISTSFKPVT 531
Query: 595 LLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL 654
+ EQ+ +G D D +P +LFVKN++F T + + F ++ V+ K
Sbjct: 532 ISEQEADG-PDGDDEPSLSAGSTLFVKNISFSTTSDRFTQVF-RNLPSFAFARVQTKPDP 589
Query: 655 KN-------GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVK 707
K +SMG+GF+ F + + A + +QG +LDGHAL ++ +E K
Sbjct: 590 KRPAVPGVEAPRLSMGYGFVGFKTADAAQKALKSMQGFVLDGHALHVKFAGRGAEEDEGK 649
Query: 708 KAEKDKS-STKLLVRNVAFEAQRK 730
K KS +TK++V+N+ FEA +K
Sbjct: 650 DKGKTKSNTTKMIVKNMPFEATKK 673
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P T+ +R+ F G++ +L + D +SR FAF+ F T EAE A
Sbjct: 659 TKMIVKNMPFEATKKDIRELFGAHGQLKSVRLPKKFDSRSRGFAFLEFVTRHEAENAYAM 718
Query: 61 FNKSYL 66
+L
Sbjct: 719 LRHIHL 724
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 485 GKTDGLKRSNHV-FLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFL 538
GK G +SN +VKN+P+++++ ++ ++FG G L V LP ++ A + F+
Sbjct: 648 GKDKGKTKSNTTKMIVKNMPFEATKKDIRELFGAHGQLKSVRLPKKFDSRSRGFAFLEFV 707
Query: 539 EPVEAAAAFKGLAYKRYKGVPLYLEWA 565
EA A+ L + G L L+WA
Sbjct: 708 TRHEAENAYAMLRHIHLLGRHLVLQWA 734
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ VKN+ F+ +++R+ FG H G++ SV++ K + S GF F+EF + A N
Sbjct: 661 MIVKNMPFEATKKDIRELFGAH---GQLKSVRLPKKFDS---RSRGFAFLEFVTRHEAEN 714
Query: 678 VCRDLQGTILDGHALILQLC-HAKKDEQVVKK 708
L+ L G L+LQ ++D V++K
Sbjct: 715 AYAMLRHIHLLGRHLVLQWAEEGEQDLDVLRK 746
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ V+N+P+ AT+ ++RE F G + V + D+ RS+G A++ + A A +
Sbjct: 660 KMIVKNMPFEATKKDIRELFGAHGQLKSVRLPKKFDS-RSRGFAFLEFVTRHEAENAYAM 718
Query: 360 LDNSIFQGRLL 370
L + GR L
Sbjct: 719 LRHIHLLGRHL 729
>gi|428175786|gb|EKX44674.1| hypothetical protein GUITHDRAFT_109452 [Guillardia theta CCMP2712]
Length = 895
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 253/778 (32%), Positives = 393/778 (50%), Gaps = 112/778 (14%)
Query: 37 DGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYS---- 92
DGKSR F F+GF++E++A +A+KYF +Y+DT +I+ E A+ VGD ++ RPWS+YS
Sbjct: 15 DGKSRNFGFVGFKSEKDAHKALKYFQDTYIDTSKITVEFAKPVGDSSLSRPWSKYSEGSS 74
Query: 93 ----LKKEKEVSEDEKNPVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWAND 148
+ K+ ++ +NP K+ K+ DP++ F++ +PR K+K+W ND
Sbjct: 75 AHDRVTKKHSSADVSENPTKPEKKLSKEAQLLQKAKTDPEMKAFVESFKPRSKTKIWEND 134
Query: 149 ---------------TLIGLMADQKAKVSE-------NISQAIKGGEKSITLHVKSD--- 183
IG + D+K E ++ + + GGE + D
Sbjct: 135 DPLLAAAEVKQVGTTRWIGGVEDRKEGEGEENKQSKGDVFEYVAGGEAGTSDEEYEDVPK 194
Query: 184 ------KSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDD 237
K + +++ K N A + + DM Y K+++ W DS+ ED+ A +D+ D
Sbjct: 195 KQEDGEKEDGEGEAKGAGKDANQAFNPALDDMAYLKAKMSSSWKDSDDEDEGASEDEMSD 254
Query: 238 DGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLE 297
+G ++ + + + EE + ++ GE E D + S ++ +Q+V +
Sbjct: 255 EGGMKKVSKGRDDEEEQEEDEGGEEEDQEMSEGEGKDRKE--DQPDMSHVTQATRQDVEQ 312
Query: 298 S------------GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYV 345
GRLFVRNLPY+ +E+EL FSKFG +SEVHI + TK G+A++
Sbjct: 313 DKRDDDEDDEVEDGRLFVRNLPYSTSEEELTAFFSKFGELSEVHICIHNITKEPTGMAFI 372
Query: 346 LYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEER 405
L+ IP A + + + + L + G+ +++E+++
Sbjct: 373 LFLIPSDADKQAKQRRKEEEEQKKLE-----------------AGKDGSSYKAKKKEQQK 415
Query: 406 KASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND-LAVRIALGETQVIAE 464
K S +S N WN LFMR DTV E IA KH + K+ LLD E++ +AVR+ALGET +I
Sbjct: 416 KTSASSHN---WNMLFMRSDTVAEAIANKHQMDKAQLLDHESSSSMAVRMALGETHIIET 472
Query: 465 TKKALTNAGVNVSSLE---EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSL 521
TK L GVNVS LE + RSN LVKN+P+ ++ EL ++F +FG +
Sbjct: 473 TKSDLRENGVNVSCLEVAWNLFLVEKKPRDRSNTAMLVKNIPFSTTLQELRELFERFGDV 532
Query: 522 DKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL---SQSSTSKG 578
+LP TKT+A+V F P EA AFK LAY ++K P+YLEWAP D+ + + +S+G
Sbjct: 533 SHAVLPKTKTMAIVDFTHPSEARKAFKSLAYSQFKHQPIYLEWAPVDIFLPGAPTLSSEG 592
Query: 579 NQKNDAVVGE-----HDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLR 633
+K V E K E+Q E + P+ R+L+VKNLNFKT +E L+
Sbjct: 593 GKKQPKAVEEEGKTQEGGKAGKQEKQQE-----EKSPEG-SGRTLYVKNLNFKTTEEALK 646
Query: 634 KHFGEHIKEGRILSVKVKKHLKNGKN------VSMGFGFIEFDSVETATNVCRDLQGTIL 687
E + + + K + K GK+ +SMG+GF+EF + A R LQGT L
Sbjct: 647 GKMEGGGGEVKAVRIVTKPNPKAGKDSKEPSRLSMGYGFVEFKRSKDANEALRKLQGTKL 706
Query: 688 DGHALILQLCH------------AKKDEQVVKK---AEKDKSSTKLLVRNVAFEAQRK 730
DGH L L++ KD + K ++ + +KL++RNV FEA +K
Sbjct: 707 DGHVLQLKMSSRVSADSSAGEVDVTKDNRSRAKPSDSQAPQDCSKLVIRNVPFEANKK 764
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQE 53
S++ ++N+P + LRD S GE+T +L DG R FAF F T QE
Sbjct: 750 SKLVIRNVPFEANKKELRDLLSSFGELTSLRLPSKFDGSHRGFAFAEFVTHQE 802
>gi|407925474|gb|EKG18485.1| hypothetical protein MPH_04287 [Macrophomina phaseolina MS6]
Length = 836
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 251/776 (32%), Positives = 399/776 (51%), Gaps = 99/776 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI V+NLP +T+ R FSQ+ +TD KL+ R+ ++G++T + AE+A+KY
Sbjct: 4 SRIFVRNLPPTLTDADFRKHFSQRDAVTDTKLL-----AHRRIGYVGYKTPEAAEKAVKY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSED--EKNPV----LAAKRGE 114
FNK+++ RI E+AR V + PR R + +D E PV L KRG
Sbjct: 59 FNKTFIRMSRIGVELARPVDEAPQPRNRKRAPTAALPALDKDLNESKPVEENSLKRKRGV 118
Query: 115 KKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTL-IGLMA------------------ 155
+E DP+L EFL+VM+P K+K WAND + +G A
Sbjct: 119 DDAVE-----SDPKLKEFLEVMKPASKNKTWANDDMHVGQSAVAEDTTLVEPVQVAEAES 173
Query: 156 -------DQKAKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSD 208
+K + SE+ + A + + + T DKS+ D Q + ++ + MSD
Sbjct: 174 DDEYQTVQKKPRRSES-TPAAETSDVTTTAIQPPDKSSP-EDQQVNDGNEPQLETQPMSD 231
Query: 209 MDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSG 268
+D+ +SR + + G +DD EEE H E+ + I
Sbjct: 232 LDWLRSRTSR----------TLGVVEDD-------EEELTHRPKPPEKEEPIASHEDKPE 274
Query: 269 VGEEDANGEIVDPGNPSSSSKDVQ-----QEVLESGRLFVRNLPYTATEDELREHFSKFG 323
V ED + + G ++ + Q + + ++GRLF+RNLPY +ED+LR++F+ FG
Sbjct: 275 V--EDDTPQPISGGGAATEKTEAQVSTEIESIRQTGRLFLRNLPYDVSEDDLRDYFNSFG 332
Query: 324 NVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK 383
+ EVH+ +D T KG AYVL+ A RA E LD IFQGRLLH++PA K+ +
Sbjct: 333 TLEEVHVPLDAKTGSGKGFAYVLFEESNDAVRAYEDLDGRIFQGRLLHIIPAAAKRENKL 392
Query: 384 QELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLL 443
+ S +KQ+R ++KA +A+ +T WNSL+M D V+ ++A + GVSKS++L
Sbjct: 393 DDFAISKL----PIKQQRRIQQKA-QAATSTFNWNSLYMNADAVISSVADRLGVSKSEVL 447
Query: 444 DREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLP 503
D ++D AV+ A ET +I ETK + GV++ + ++ + G T LVKN
Sbjct: 448 DPTSSDAAVKQAHAETHIIQETKAYFSQNGVDLDAFKQKARGDT--------AILVKNFS 499
Query: 504 YDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLE 563
Y + EL KMF + G++ + ++P + T+A+V F + +A AAF LAY++ K L+LE
Sbjct: 500 YGTKPDELKKMFEEHGTVTRFLMPPSGTIAIVEFAQAPQARAAFASLAYRKIKDSILFLE 559
Query: 564 WAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNL 623
AP D+ + T A E AK A + + + P++ ++ +L+V+NL
Sbjct: 560 KAPKDLFKEGFTPHAIPTAAAPTAEGKAKLAASD-----LLAKEASPEQFDTSTLYVRNL 614
Query: 624 NFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCR 680
NF T + L + F +G +S +VK K G+ +SMGFGF+EF + E A
Sbjct: 615 NFATTSQRLTEVF--RPLDG-FVSARVKTKTDPKKPGQVLSMGFGFLEFRTKEQAQAALA 671
Query: 681 DLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS------STKLLVRNVAFEAQRK 730
+ G LDG+ L+++ + D ++ E DK+ TK++++N+ FEA +K
Sbjct: 672 AMDGYNLDGYKLMIKASNKGLDAAEERRKE-DKAKKAAGRQTKVIIKNLPFEATKK 726
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ S R+FVRNLP T T+ + R+HFS+ V++ ++ + I YV Y PE+A +
Sbjct: 1 MASSRIFVRNLPPTLTDADFRKHFSQRDAVTDTKLLA------HRRIGYVGYKTPEAAEK 54
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
A++ + + + + V AR
Sbjct: 55 AVKYFNKTFIRMSRIGVELAR 75
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ +KNLP T+ +R F G++ ++ + D +R FAF F T +EAE A+
Sbjct: 712 TKVIIKNLPFEATKKDIRALFGAYGQLRSVRVPKKFDASARGFAFADFTTPREAENAMDA 771
Query: 61 FNKSYL 66
++L
Sbjct: 772 LRNTHL 777
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R F +G + V + D ++G A+ + P A A++
Sbjct: 713 KVIIKNLPFEATKKDIRALFGAYGQLRSVRVPKKFDAS-ARGFAFADFTTPREAENAMDA 771
Query: 360 LDNSIFQGRLL 370
L N+ GR L
Sbjct: 772 LRNTHLLGRKL 782
>gi|449544221|gb|EMD35195.1| hypothetical protein CERSUDRAFT_116663 [Ceriporiopsis subvermispora
B]
Length = 788
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 253/745 (33%), Positives = 382/745 (51%), Gaps = 74/745 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQK----GEITDAKLMRTKDGKSRQFAFIGFRTEQEAEE 56
SR+ VKNLP Y+T+ LR F K G +TD K++ DG SR+F F+G++T EAE
Sbjct: 2 SRLIVKNLPSYLTQQGLRAHFESKDGPGGTLTDVKVVLRPDGTSRRFGFLGYKTPAEAER 61
Query: 57 AIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKK 116
A K++N++++D RIS E+ V D PRP R L + S + P R +
Sbjct: 62 AKKWYNRTFVDGSRISVEVIEGVKDAPPPRPNKRPRL----DASGGDSTP----GRSSQD 113
Query: 117 TIEKVTENDDPQLL----EFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGG 172
++ E P+ EFL+ MQPR K WA+ G ++ Q + + +
Sbjct: 114 RTHELKEVKSPKANALADEFLRTMQPRTKGPSWAD----GDLSSQPIASTSTGTSS---- 165
Query: 173 EKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGD 232
S+ KS D E +A E SD+D+ K + S D +
Sbjct: 166 SASMKSKKDRSKSKDAPDQHHAEPQPDA---EAASDLDWLKRHTRSTLDPDASAADKVFN 222
Query: 233 DDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQ 292
DD E + E H D+++ V E DP ++
Sbjct: 223 QSDD---EADAATEGSHADDTDKVA-----------VTE--------DP---------LK 251
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+LE+GRLF+RNL YT T++EL++ FS +G +++VHI VD TK+ KG+AYV +A P S
Sbjct: 252 VTILETGRLFLRNLSYTCTDEELKQLFSPYGEIAQVHIPVDPLTKQPKGLAYVTFAQPSS 311
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG 412
A A E LD + FQGRLLHV+PA ++ +K+ + KTLK+ R+ +RKAS +G
Sbjct: 312 AVAAFEALDKASFQGRLLHVLPAVDRRGKEKEGEGAGDAGRKKTLKEERDAKRKAS--AG 369
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNA 472
W L+M D VV ++A + +SKS++LD +++ AV++AL ET +I ETK L
Sbjct: 370 REFNWAMLYMNSDAVVSSVADRLHISKSEILDPTSDNAAVKLALAETHIIQETKTFLEEN 429
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL 532
GV +SSL S G+ +KRS+ + LVKN+PY +S L +F G+L +V++P TL
Sbjct: 430 GVVMSSL---SPGQP--IKRSDTIILVKNIPYGTSAEALRSLFEPHGTLRRVLIPPAGTL 484
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAV-VGEHDA 591
A+V F + AFK LAY+R +YLE P + ++ S + + A+ A
Sbjct: 485 AVVEFEHADDGKRAFKALAYRRLGNAVMYLEKGPMGMFAEGSAAPSAGGDPAIKSAASKA 544
Query: 592 KRALLEQQLEGVTDADI----DPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS 647
+ L Q+ D D +P +LFVKNL+F T L H+
Sbjct: 545 EPVKLPDQIAAAADEDRATEDEPPLSSGSTLFVKNLSFATTSAGLSA-IARHLPGFAFAR 603
Query: 648 VKVKKHL-KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC-HAKKDEQV 705
V++K + G+ +SMG+GF+ F + + A + L+GT+LDGHAL ++ +D+
Sbjct: 604 VQMKPSPNEPGERLSMGYGFVGFKTKDDAKRGAKALEGTVLDGHALSVKWAGRGTEDDAK 663
Query: 706 VKKAEKDKSSTKLLVRNVAFEAQRK 730
+ A K K TK++V+NV FEA +K
Sbjct: 664 AEDAVKAK-GTKMIVKNVPFEATKK 687
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P T+ +R+ FS ++ +L R D ++R FAF+ F T EA A
Sbjct: 673 TKMIVKNVPFEATKKDIRELFSAHAQLKSVRLPRKFDHRARGFAFLEFTTHAEAARAYAT 732
Query: 61 FNKSYLDTCRISCEIARKVGD 81
++L + E A D
Sbjct: 733 LRHTHLLGRHLVLEWAEDTQD 753
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 130/335 (38%), Gaps = 70/335 (20%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHI-------V 331
+ PG P S + + V+N+PY + + LR F G + V I V
Sbjct: 436 LSPGQPIKRSDTI---------ILVKNIPYGTSAEALRSLFEPHGTLRRVLIPPAGTLAV 486
Query: 332 VD----KDTKRS-KGIAY------VLY-------AIPESASRAIEVLDNSIFQGRLLHVM 373
V+ D KR+ K +AY V+Y E ++ D +I
Sbjct: 487 VEFEHADDGKRAFKALAYRRLGNAVMYLEKGPMGMFAEGSAAPSAGGDPAI--------- 537
Query: 374 PARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL-FMRPDTVVENIA 432
K ++ K E Q + R E + +SG+T +L F + IA
Sbjct: 538 ----KSAASKAEPVKLPDQIAAAADEDRATEDEPPLSSGSTLFVKNLSFATTSAGLSAIA 593
Query: 433 RK-HGVSKSDL-LDREANDLAVRIALGETQVIAETK-------KALTNAGVNVSSLEEFS 483
R G + + + + N+ R+++G V +TK KAL ++ +L
Sbjct: 594 RHLPGFAFARVQMKPSPNEPGERLSMGYGFVGFKTKDDAKRGAKALEGTVLDGHALSVKW 653
Query: 484 AGKT--------DGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STK 530
AG+ D +K +VKN+P+++++ ++ ++F L V LP +
Sbjct: 654 AGRGTEDDAKAEDAVKAKGTKMIVKNVPFEATKKDIRELFSAHAQLKSVRLPRKFDHRAR 713
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
A + F EAA A+ L + G L LEWA
Sbjct: 714 GFAFLEFTTHAEAARAYATLRHTHLLGRHLVLEWA 748
>gi|443895118|dbj|GAC72464.1| signal peptidase complex subunit [Pseudozyma antarctica T-34]
Length = 913
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 260/815 (31%), Positives = 403/815 (49%), Gaps = 111/815 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ V+ LP Y+T+ RLR+ FSQKG +TD KLMR DG SR+F F+G+R+EQEA+EA+ Y
Sbjct: 2 SRLIVRGLPTYLTDARLREHFSQKGAVTDVKLMRRPDGTSRKFGFVGYRSEQEAQEALDY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPV----LAAKRGE-- 114
FN++++DT RI+ E A+K+GD + + K++ +D + L A +G+
Sbjct: 62 FNRTFIDTSRITIEHAKKIGDEELTKQREERMNKRKAATGQDSQASTSAHGLDASKGKPS 121
Query: 115 KKTIEKVTENDDP----QLLEFLQVMQPRVKSKMWAN----------DTLIGLMADQKAK 160
K+ E V + EF+ VMQP+ K K W N D G+ A +K
Sbjct: 122 KENAEGVKKKPKKGGAISFEEFMSVMQPKAKRKAWQNEDARPEQTMDDIFSGVEAVEKKA 181
Query: 161 VSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADEL-MSDMDYFKSRVK-K 218
+ QA E + S A+E +AA +++ ++D +Y + R+K +
Sbjct: 182 AKKAKKQAKAEAEAAAAAATTGSNSAQADADDASEPEPDAAVNDVGLTDEEYMRLRMKHR 241
Query: 219 DWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEI 278
+D +++DD E+ ++E D ++ D V +E+ +
Sbjct: 242 VGTDLDTQDDPTAPQ------FEQSDDEKDDKAVASASDSESDSDDEADAVNDEELERKQ 295
Query: 279 VDPGNPSSSSKDVQQ----EVLESGRLFVRNLPYTATEDELREHFSKFGNV--------- 325
+ + + Q +++ESGRLFVRNLP+TAT+D++ F FG V
Sbjct: 296 AAQRRKAEQAAERDQKIVDQIMESGRLFVRNLPFTATDDDIESFFESFGTVKQVSPPSSL 355
Query: 326 ------------------------------------------SEVHIVVDKDTKRSKGIA 343
++VHI +DK TK SKG+A
Sbjct: 356 PSQMCVAVVVIVAAVVALGHPYLHSMIGNRSLLTDACLGLFTAQVHIPLDKQTKASKGLA 415
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREE 403
+V ++ P A A D S FQGRLLH++PA +K + T + TLKQ R +
Sbjct: 416 FVSFSDPAHALAAYRAKDGSTFQGRLLHLLPAVNKDAP------ADTDKKAATLKQTRAD 469
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN----DLAVRIALGET 459
++K +A+ + W+ L+M D V +IA + GVSKSD+L+ A+ + AVR+AL ET
Sbjct: 470 QKK-QDATKDFN-WSMLYMSADAVASSIADRLGVSKSDILNPGADGGPDNAAVRLALAET 527
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
++I ET++ + G+NV + F G G RS+ LVKN+PY +S E+ K+F + G
Sbjct: 528 RIIQETREFFSQEGINV---DAFGTGAKAG--RSDTTMLVKNIPYGTSVDEVQKLFEEHG 582
Query: 520 SLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGN 579
+DKV++P + T+ALV EA AF+ LAYKR+KG LYLE AP VL TSK
Sbjct: 583 EVDKVLIPPSGTIALVEMPVVSEAKVAFRALAYKRFKGGILYLEKAPVGVL----TSKTG 638
Query: 580 QKNDAVVGEHDAKRALLEQQLE---GVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHF 636
D VV + K ++ + D + E +L++KNL+F T D+ L F
Sbjct: 639 --GDKVVKQAPIKGKTIDTSANPSANLAAGGADDEAAEGATLYIKNLSFSTTDDRLAGAF 696
Query: 637 GEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
+ + V+ K K G +SMG+GF+ F SV A + + G ++DGH L++
Sbjct: 697 -HGLSDYAFARVQTKPDPKRPGARLSMGYGFVGFKSVAAARTAQKAMDGKVVDGHTLVVT 755
Query: 696 LCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ STK+L++N+ FE +K
Sbjct: 756 FARRNAESSTTASLSSSGGSTKILIKNLPFEVTKK 790
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP VT+ +RD F+ +G++ +L + D +R F F+ + T +EA+ A +
Sbjct: 776 TKILIKNLPFEVTKKDIRDLFASQGQLKSVRLPKKFDNTTRGFGFVEYTTVREAQAAFEA 835
Query: 61 FNKSYL 66
++L
Sbjct: 836 LKHTHL 841
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S + +KNL F+ +++R F +G++ SV++ K N + GFGF+E+ +V
Sbjct: 775 STKILIKNLPFEVTKKDIRDLFAS---QGQLKSVRLPKKFDN---TTRGFGFVEYTTVRE 828
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKD--EQVVKKAEKDKSS 715
A L+ T L G L+LQ ++ +QV + EK KS+
Sbjct: 829 AQAAFEALKHTHLLGRHLVLQWSKQGENAQDQVDMQREKTKSA 871
>gi|412990000|emb|CCO20642.1| predicted protein [Bathycoccus prasinos]
Length = 992
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 203/476 (42%), Positives = 292/476 (61%), Gaps = 48/476 (10%)
Query: 297 ESGRLFVRNLPYTATEDELREHF-SKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
E+GR+F+RNLPYT TE+E+ +H S G ++ VH++VDK TK+SKG+AY +A+PE +
Sbjct: 412 ETGRVFLRNLPYTCTEEEIFDHMQSHVGKLTAVHVLVDKSTKQSKGLAYATFALPEDGVK 471
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGT-----------------KTLK 398
I+VLD +IFQGR+LHV+PA+ ++ ++ + T + K
Sbjct: 472 CIDVLDGAIFQGRILHVLPAKRAPTNAEKNTLGGVGRITIINDDNGEDNDDENDPKNSYK 531
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGE 458
+++E RKA A + KAWN+LFMR DTV+ IA +GV K DLL E D+AVR+ALGE
Sbjct: 532 KQKEHTRKADAA--DKKAWNALFMRQDTVLSAIAAMYGVDKGDLLSTETEDVAVRVALGE 589
Query: 459 TQVIAETKKALTNAGVNVSSLEEFSAGKTD-GLKRSNHVFLVKNLPYDSSEGELAKMFGK 517
QVIA TKK L + GVNV +LE + + + + RS H L+KNLPY+S E +L +M K
Sbjct: 590 AQVIANTKKELGDVGVNVHALESAAESRENVKIARSQHSILIKNLPYESEESDLREMCEK 649
Query: 518 FGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
FG+L +++LPST+T+A+ FLE EA AF+GLAYKRY+ VPLY+EWAP D+ S K
Sbjct: 650 FGTLSQLVLPSTRTIAIAEFLESNEARRAFQGLAYKRYRHVPLYVEWAPKDIFKTS--KK 707
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
N +D E+D +R ++ D + DP+ +S+ LFVKN++F T DE+ + F
Sbjct: 708 KNDDDDDDATENDERRTKFTKETSNKDDVEEDPEE-KSKVLFVKNIDFATTDESFLQFFE 766
Query: 638 EHIKEG-----RILSVKV-KKHLKNGKN-VSMGFGFIEFDSVETATNVCRDLQGT---IL 687
K R++S K+ +K +GK+ +S GFGF+EF+S ETA+ +C L T L
Sbjct: 767 NLCKRAGGKNRRLVSAKIARKPNSDGKSLLSKGFGFVEFESHETAS-ICSKLVSTGIGKL 825
Query: 688 DGHALILQLCHAKKDEQVVK-------------KAEKDKSSTKLLVRNVAFEAQRK 730
DG L ++L K + V+ K K KS+TKL++RNVAFEA ++
Sbjct: 826 DGKVLSIELSRQKMSRETVEDDNTNALAMKKKSKIPKGKSATKLVLRNVAFEATKR 881
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 58/114 (50%), Gaps = 22/114 (19%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDG-------------------KSR 41
SR+C+KNLPK+ TE R R+ FS GE+TD + T G SR
Sbjct: 32 SRLCIKNLPKHYTEVRFREHFSTIGEVTDCVIKNTHGGTNDNDSRSSWRQHRKQQQQTSR 91
Query: 42 QFAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIA--RKVGDPNMPR-PWSRYS 92
FIG++TEQ A A KYF+ +++DT RI A RK R WS+YS
Sbjct: 92 CLGFIGYKTEQMAILAQKYFHNTFIDTSRIDVSFAASRKERAALSERSSWSKYS 145
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 30/62 (48%)
Query: 269 VGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEV 328
G+ED E NP S Q L S RL ++NLP TE REHFS G V++
Sbjct: 2 AGKEDQQREETFKANPEHPSDGDVQTPLVSSRLCIKNLPKHYTEVRFREHFSTIGEVTDC 61
Query: 329 HI 330
I
Sbjct: 62 VI 63
>gi|409042979|gb|EKM52462.1| hypothetical protein PHACADRAFT_126290 [Phanerochaete carnosa
HHB-10118-sp]
Length = 767
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 249/744 (33%), Positives = 368/744 (49%), Gaps = 98/744 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG----EITDAKLMRTKDGKSRQFAFIGFRTEQEAEE 56
SR+ VKNLP Y+T+ +LR+ F KG +TD K++ DG SR+F F+G++TE EAE+
Sbjct: 2 SRLIVKNLPAYLTQQQLREHFESKGGPGGALTDVKVVLKPDGTSRRFGFVGYKTEVEAEK 61
Query: 57 AIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPV---LAAKRG 113
A K+F+++++ + RI+ + D PRP R L E E PV ++ ++
Sbjct: 62 ATKWFDRTFIHSSRINVSVIEGAKDAPAPRPNKRSRL----EGPPSEGKPVKDKVSKEKA 117
Query: 114 EKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWAN-DTLIGLMADQKAKVSENISQAIKGG 172
+ T + +N D +L EF+QVMQPR K W + DT+ A A S+
Sbjct: 118 KPSTKGRGRDNKDERLEEFMQVMQPR-KGPSWKDVDTVPSADAQGVASTSK--------- 167
Query: 173 EKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGD 232
+ + +S K D + ++ + + E SD+D+ K +K + SES D
Sbjct: 168 ---VRMQGRSAKE----DEEPSDA--DVSGGEPASDVDWLKRHMKPSLTLSESADMVF-- 216
Query: 233 DDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQ 292
D D E ++ E +E S I
Sbjct: 217 --DQSDTEMDQLSETPAKSSPEDEAKSTI------------------------------- 243
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
L +GRLF+RNL +T TEDEL F FG VS+ HI +D TK SKG+ YV +A PE
Sbjct: 244 ---LRTGRLFLRNLAFTCTEDELLGLFQPFGEVSQTHIPLDSITKTSKGLGYVTFADPEK 300
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG 412
A A E LD FQGRLLHV+PA ++K E +TLK RE ++KA +G
Sbjct: 301 AVIAYETLDKMSFQGRLLHVLPAINRKGKVAVEEVGK----KRTLKDEREAKKKA--IAG 354
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNA 472
W L+M D VV ++A + +SKSD+L+ E+++ AV++AL ET VI ETK L
Sbjct: 355 KDFNWGMLYMNSDAVVSSVADRMNISKSDILNPESDNAAVKLALAETHVIQETKSFLETN 414
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL 532
GV +SSL + RS+ LVKN+PY +S ++ ++F G L +V++P T+
Sbjct: 415 GVVLSSLS------GPRVARSDTTILVKNIPYGTSADQIRELFEAHGKLRRVLVPPAGTM 468
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
A+V F+ EA AFK +AY+R YLE P + S N +V A
Sbjct: 469 AVVEFVHSDEARKAFKTVAYRRMGNSITYLEKGPVGMFVDSVPV----ANGSVTIASAAP 524
Query: 593 RALLEQQLEGVTDADI--DPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV 650
+ + TDA DP +LFVKNL F T E F H+ + V+
Sbjct: 525 VKIAD------TDAPSPNDPPPNAGSTLFVKNLAFSTASERFVAAF-RHLPDFAFARVQT 577
Query: 651 KKHLKNGKN----VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV 706
K K + +SMG+GF+ F + E A + +QG +LDGHAL+++ +E+
Sbjct: 578 KPDPKKPGDAHARLSMGYGFVGFKTAEGARKGLKAMQGYVLDGHALVVKFAGRGAEEEKE 637
Query: 707 KKAEKDKSSTKLLVRNVAFEAQRK 730
+ +TK++V+NV FEA +K
Sbjct: 638 DAGKVKSRTTKMIVKNVPFEATKK 661
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P T+ +RD F G++ +L + D +SR FAF+ F T EAE A
Sbjct: 647 TKMIVKNVPFEATKKDIRDLFGAHGQLKSVRLPKKFDHRSRGFAFLEFITRHEAENAYAA 706
Query: 61 FNKSYLDTCRISCEIA 76
++L + E A
Sbjct: 707 LRHTHLLGRHLVLEWA 722
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 609 DPDRVESRS--LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGF 666
D +V+SR+ + VKN+ F+ +++R FG H G++ SV++ K + S GF F
Sbjct: 638 DAGKVKSRTTKMIVKNVPFEATKKDIRDLFGAH---GQLKSVRLPKKFDH---RSRGFAF 691
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLC 697
+EF + A N L+ T L G L+L+
Sbjct: 692 LEFITRHEAENAYAALRHTHLLGRHLVLEWA 722
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLA 551
+VKN+P+++++ ++ +FG G L V LP ++ A + F+ EA A+ L
Sbjct: 649 MIVKNVPFEATKKDIRDLFGAHGQLKSVRLPKKFDHRSRGFAFLEFITRHEAENAYAALR 708
Query: 552 YKRYKGVPLYLEWAPSD 568
+ G L LEWA D
Sbjct: 709 HTHLLGRHLVLEWAEED 725
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ V+N+P+ AT+ ++R+ F G + V + D RS+G A++ + A A
Sbjct: 648 KMIVKNVPFEATKKDIRDLFGAHGQLKSVRLPKKFD-HRSRGFAFLEFITRHEAENAYAA 706
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERK 406
L ++ GR L + A S D +EL G K+ ++RK
Sbjct: 707 LRHTHLLGRHLVLEWAEEDSSVDIEELRKKAGVGFGGGKELPGKKRK 753
>gi|255075605|ref|XP_002501477.1| predicted protein [Micromonas sp. RCC299]
gi|226516741|gb|ACO62735.1| predicted protein [Micromonas sp. RCC299]
Length = 951
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 208/481 (43%), Positives = 282/481 (58%), Gaps = 46/481 (9%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+ V E+GRLFVRNLP+TATE+E+ HF+ +GN++ V I+ DK TKRSKG+AY+ YA+PE+
Sbjct: 372 EAVAETGRLFVRNLPFTATEEEVAAHFAPYGNLAGVFILADKATKRSKGLAYITYALPEN 431
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSD------KQELHNSTSQGTKTLKQRREEERK 406
ASRA+E LD SIFQGRL+H++PAR S D E N K+ REE K
Sbjct: 432 ASRAMEELDGSIFQGRLIHLLPARRPPSGDAVGANLNGENFNGEDGADGNFKRSREERLK 491
Query: 407 ASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETK 466
+A N AWNSLFMR DTV +A K+GVSK+DLL+ ND+AVR+ALGE QVIA+TK
Sbjct: 492 -RDAGTNRAAWNSLFMRQDTVAAAVAAKYGVSKADLLESGENDVAVRMALGEAQVIADTK 550
Query: 467 KALTNAGVNVSSLEEF----------SAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFG 516
L+ AGV+ +LE S G G+KRSN L+KNLP++S EL +
Sbjct: 551 DQLSAAGVDPGALEAAAASSGANANKSGGGVGGVKRSNVAILLKNLPFESEVNELRGLCE 610
Query: 517 KFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTS 576
+FG + +++LP TKT+A+V +LEP +A AFKGLAYKRY+ VP+Y+EWAP + +
Sbjct: 611 RFGGVARMVLPDTKTIAVVEWLEPGDARKAFKGLAYKRYRHVPIYVEWAPEGIFTGDQPV 670
Query: 577 KGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR-------------VESRSLFVKNL 623
A + D L++ E DA ++ E+ LFVK L
Sbjct: 671 GTVNGAPARTPKIDGGGLGLQKMRE--RDAIVNAKAKNSDDDDDDTAGDAEATRLFVKGL 728
Query: 624 NFKTCDENLRKHF--GEHIKEGRILSVKVK-KHLKNGKNVSMGFGFIEFDSVETATNVCR 680
+F T D +LR HF GR+L+ V + G N+S G+GF+EFDS A + R
Sbjct: 729 SFNTTDASLRAHFLRAAAAASGRVLAATVATQKGPGGANLSRGYGFVEFDSPGAARSAKR 788
Query: 681 DLQGTILDGHALILQLCH-----------AKKDEQVVKKAEKDKSSTKLLVRNVAFEAQR 729
+QG LDG AL L++ D++ K K S+TK++VRNVAFEA +
Sbjct: 789 AMQGKELDGRALRLEISSRGGGGGGGGGGGGGDDKDKDKVPKGTSATKIVVRNVAFEATK 848
Query: 730 K 730
+
Sbjct: 849 R 849
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
Q+ S RL V+N+P ED LREHF++ G V++V I+ D K S+ +A+V Y
Sbjct: 20 QEPAPPSSRLCVKNIPKHLKEDRLREHFAERGEVTDVKILKTGDGK-SRQMAFVGYKTTA 78
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRRE 402
A +A+E N+ + V AR KS+ + S+G+ ++ E
Sbjct: 79 DAVKALEYFHNTFIDTSRVQVEYARAVKSAQLPRPWSKHSEGSSAHRRTHE 129
>gi|357447143|ref|XP_003593847.1| Multiple RNA-binding domain-containing protein [Medicago
truncatula]
gi|355482895|gb|AES64098.1| Multiple RNA-binding domain-containing protein [Medicago
truncatula]
Length = 559
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 234/538 (43%), Positives = 309/538 (57%), Gaps = 118/538 (21%)
Query: 66 LDTCRISC-------EIARKVGDPNMPRPWSRYSLKKE-KEVSEDEKNPVLAAKRGEKKT 117
LDT +C +A+K GD N+P PWS +S+KK+ K ++ KN A +G++
Sbjct: 41 LDTFVATCVYYTRRSHVAQKRGDANLPCPWSWHSIKKDNKVITPGAKNHARA--KGQEDN 98
Query: 118 IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSIT 177
+ + DD +L +FLQVMQPR KSK+WAN+T + + D + + N G
Sbjct: 99 SKDI---DDLKLQDFLQVMQPRAKSKLWANETTV-VSNDGNNQATLNKET---NGTSIAN 151
Query: 178 LHVKSDKSNV-ITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDD 236
+ SD+ V + ++ ++KS+ D +MSD+DYFK++V S+SE G+D+
Sbjct: 152 YPILSDRQVVGLPNNPESDKSRELNHDGVMSDIDYFKNKVTT--DWSDSESSDDGNDNVT 209
Query: 237 DDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSS---------- 286
D E ++ D N EC+ + G+ED GE D N S
Sbjct: 210 SDSEFAVHDDKD-NRSPASECEENCE-------GQEDIFGE--DVANDKSQGTATEEEEK 259
Query: 287 -SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYV 345
S+ +V++EV ES RLFVRNLPYT TE+EL E+FS+FG+VS+VH+VVDK+TKRSKGIAY+
Sbjct: 260 LSNPEVKKEVPESCRLFVRNLPYTTTEEELEEYFSQFGSVSQVHLVVDKETKRSKGIAYI 319
Query: 346 LYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEER 405
+++P+ A+R ++N QGTKTLKQRREEER
Sbjct: 320 HFSVPDFAARVRNNVENCF---------------------------QGTKTLKQRREEER 352
Query: 406 KASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAET 465
K +EASG+T+AWNSLFMRPDT+VEN+ARK+GVSKSDLLDREA+DLAVRIALGETQVI+ET
Sbjct: 353 KVAEASGDTRAWNSLFMRPDTIVENVARKYGVSKSDLLDREADDLAVRIALGETQVISET 412
Query: 466 KKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVI 525
K L +NLPY ++E ELAK+ GKFGSLDK+I
Sbjct: 413 KT------------------------------LRRNLPYGATENELAKILGKFGSLDKII 442
Query: 526 LPSTKTLAL--------------------VVFLEPVEAAAAFKGLAYKRYKGVPLYLE 563
L STKTLAL VVFLEP EA A F GLAYKRYK P +E
Sbjct: 443 LASTKTLALVFFLSPSFHDMSMYFLYFGEVVFLEPTEAKADFTGLAYKRYKDAPNCME 500
>gi|50307487|ref|XP_453723.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690224|sp|Q6CQR6.1|MRD1_KLULA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49642857|emb|CAH00819.1| KLLA0D14949p [Kluyveromyces lactis]
Length = 878
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 270/834 (32%), Positives = 415/834 (49%), Gaps = 173/834 (20%)
Query: 1 SRICVKNLPKYVTEDRLRDF----FSQKGE-------ITDAKLMRTKDGKSRQFAFIGFR 49
SR+ VK LP Y+ EDRLRD +QK + ++D KLM+ +DG+SR+FAFIGFR
Sbjct: 2 SRVIVKGLPIYLKEDRLRDLIEKRLTQKHQSTDVQSYLSDVKLMKNRDGESRRFAFIGFR 61
Query: 50 TEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMP---RPWSRYSLKKEKEVSEDEKNP 106
E++A + + YFN +++DT +I +A+ DP +P R R +LK+ +E E
Sbjct: 62 DEEDAFDCVNYFNGTFVDTSKIEVSMAKSFADPRVPQPMREKRREALKRLREREELLLAD 121
Query: 107 VLAAKR----------GEKKTIE-KVTENDDPQLLEFLQVMQPRVKSKMW---------- 145
+++ G+K I+ ++ +N QL EF+ M+P + W
Sbjct: 122 KKDSQKKQKSDSNNDGGKKHDIDAEIAKNK--QLQEFINTMKPSSQVTSWETVQSSKTQG 179
Query: 146 ----ANDTLIGLMADQKAKVSENISQAI--KGGEKS-------------------ITLHV 180
A D +G M+ +SQA+ KG + ++L+
Sbjct: 180 EDEEAADDEVGEMSSNPL-----LSQALALKGNSRDADEDTDMFKLPGNESDDEYVSLNG 234
Query: 181 KSDKSNV-----------ITDSQATEKSKNAAADELMSDMDYFKSR-VK-KDWSDSESED 227
S+ +N D+ + + A DE +SD+D+ K+R V+ KD +D+
Sbjct: 235 GSNNANTDEPEPQMMSLDTFDTAGPTSTDDMAKDEAVSDLDWLKNRRVRIKDGADTPVSK 294
Query: 228 DSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSS 287
D + EE E E + + EE S+ K
Sbjct: 295 QQQQPDTEQQQPEETEVETSQES----EEEKSLKK------------------------- 325
Query: 288 SKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
+ E+GRLF+RN+ YTATED+ R+ FS +G + EVHI VD T +SKG AYVL+
Sbjct: 326 -------IRETGRLFLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLF 378
Query: 348 AIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQRREEER 405
++A+ A LD IFQGRLLH++PA KKS D+ +L N LK++RE +R
Sbjct: 379 KNADNAATAFVELDKQIFQGRLLHILPADAKKSHKLDEFDLKNL------PLKKQRELKR 432
Query: 406 KASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAET 465
KA+ A T +WNSL+M D V+ ++A K G+ KS+L+D E + AV+ AL E VI +
Sbjct: 433 KANSAQ-QTFSWNSLYMNQDAVLSSVADKLGMKKSELIDAENSSSAVKQALAEASVIGDV 491
Query: 466 KKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVI 525
+K GV+++ + +R + V LVKN PY ++ E+A++F FG L +++
Sbjct: 492 RKFFETRGVDLTKFAQLKNS-----ERDDRVILVKNFPYGTTREEIAELFLPFGKLQRLL 546
Query: 526 LPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAV 585
LP + T+A++ F + A AAF ++YKR+K +YLE PSD ++ + Q ++ V
Sbjct: 547 LPPSGTIAILQFRDVPAARAAFSKISYKRFKDGIIYLEKGPSDCFTRDA-----QGDELV 601
Query: 586 VGEHDAKRALL-EQQLEGVTDADIDPDRVESRSL-------------------------F 619
E D ++A E ++ G D +E++SL F
Sbjct: 602 ESETDIQKATAKEAKISGA-------DLLEAQSLPAADKDDHDDDDDDDDVQAGPTVSIF 654
Query: 620 VKNLNFKTCDENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETATN 677
+KNLNF T + L + F G +++ VK K K GK +SMGFGF EF + E A
Sbjct: 655 IKNLNFSTTSQQLTEKFKPF--NGFVVAQVKTKPDPKQPGKTLSMGFGFAEFKTKEQANA 712
Query: 678 VCRDLQGTILDGHALILQLCHAKKDEQV-VKKAEKDKSSTKLLVRNVAFEAQRK 730
V ++GTILDGH L L+L H + +K K+ K++V+N+ FEA RK
Sbjct: 713 VISAMEGTILDGHKLQLKLSHRQGTSTTNASSKKKKKNQGKIIVKNLPFEATRK 766
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G++ V+NLP+ AT ++ E FS FG + V V K K ++G A+V + +P+ A A++
Sbjct: 752 GKIIVKNLPFEATRKDVFELFSSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAENAMD 810
Query: 359 VLDNSIFQGRLL 370
L GR L
Sbjct: 811 QLQGVHLLGRRL 822
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
+VKNLP++++ ++ ++F FG L V +P S + A V FL P EA A L
Sbjct: 755 IVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLQG 814
Query: 553 KRYKGVPLYLEWA---PSDVLSQ 572
G L +E+ P DV Q
Sbjct: 815 VHLLGRRLVMEFVEQDPEDVEQQ 837
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 585 VVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGR 644
++ H + L +Q T+A + + VKNL F+ +++ + F G+
Sbjct: 721 ILDGHKLQLKLSHRQGTSTTNASSKKKKKNQGKIIVKNLPFEATRKDVFELFSSF---GQ 777
Query: 645 ILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHA----- 699
+ SV+V K + GF F+EF + A N LQG L G L+++
Sbjct: 778 LKSVRVPKKFDKS---ARGFAFVEFLLPKEAENAMDQLQGVHLLGRRLVMEFVEQDPEDV 834
Query: 700 -KKDEQVVKKAEKDKSSTKLLVRNVAFEAQRKI 731
++ E++ +K +K ++TK + N+ +RKI
Sbjct: 835 EQQIEKMTRKVKKQVNTTK--IANMRNSGKRKI 865
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+I VKNLP T + + FS G++ ++ + D +R FAF+ F +EAE A+
Sbjct: 753 KIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQL 812
Query: 62 NKSYLDTCRISCEIARKVGDP 82
+L R+ E + DP
Sbjct: 813 QGVHLLGRRLVMEFVEQ--DP 831
>gi|156054690|ref|XP_001593271.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980]
gi|154703973|gb|EDO03712.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 842
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 256/775 (33%), Positives = 385/775 (49%), Gaps = 92/775 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI +K LP +TED + F EITDAKL+ R+ +IG++T +EA +A+KY
Sbjct: 4 SRIFIKGLPPNITEDEFKTHFGANQEITDAKLI-----SHRRIGYIGYKTPEEAVKAVKY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKR-GEKKTIE 119
FNKS++ +I EIAR + D ++P S K ++E E E N + K+ + K E
Sbjct: 59 FNKSFVRLSKIGVEIARPISDSSLP-----ISRKVQRE-QERENNKIRHLKQEADAKASE 112
Query: 120 KVTEND----------DPQLLEFLQVMQPRVK--SKMWA-----NDTLIGLMADQKAKVS 162
+ DP+L EFL+VMQP K S MW +D M Q +V
Sbjct: 113 SLNTGTKRKRSDIDAADPKLQEFLEVMQPASKSNSNMWKAGAMDDDIEEPPMKLQAIEVP 172
Query: 163 EN---------ISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDM---- 209
E S++ K K I V + + IT + ++ + DE+M D
Sbjct: 173 EGESDDEYQSVPSKSKKAPAKPIDPQVPAAPAAPITSAITSDNAD--PTDEVMVDTPSNN 230
Query: 210 ------DYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKD 263
D+ +S + + ED + + D EE E + N + ++ D
Sbjct: 231 VEATDDDWLRSHTSRLLDIVDPEDIISKTQNLDVKNVEEVTAE---KAEPNPPVEDMVVD 287
Query: 264 SIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFG 323
+ + E+ P NP+S + + SGRLFVRNLPY+ATED+LR+HF ++G
Sbjct: 288 AESEAMEEQ--------PENPASELDATIETIKASGRLFVRNLPYSATEDDLRKHFEQYG 339
Query: 324 NVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK 383
+ E+H+ VD SKG V Y P +A+ A +D FQGRLLH++PA K+ +
Sbjct: 340 ALEEIHLPVDAKGA-SKGFVLVQYTDPNAAAEAYHNVDGEPFQGRLLHILPAAAKRDNKL 398
Query: 384 QELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLL 443
E + +++ +K +++S NT WNSL+M D V ++A + GVSKSDLL
Sbjct: 399 DEFAIAKLP-----LKKQRLLKKKADSSSNTFNWNSLYMNQDAVNSSVAERLGVSKSDLL 453
Query: 444 DREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLP 503
D + D V+ A+ ET VI ETK N GV++ + ++ G T LVKN
Sbjct: 454 DPTSADAGVKQAIAETSVIQETKSYFANNGVDLDAFKKRERGDT--------AILVKNFT 505
Query: 504 YDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLE 563
Y + EL K F +FG + +V++P T T+A+V F +P A AAF LAY+R K L+LE
Sbjct: 506 YGMTLEELRKTFEEFGQVIRVLMPPTGTIAIVEFAQPTHARAAFASLAYRRMKDTVLFLE 565
Query: 564 WAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNL 623
AP D+ + + S+ D G+ + LE + A + V++ +LFV+NL
Sbjct: 566 KAPKDLFTGPAPSQPVATIDRNAGKAADPKFSTSDLLERESGA----ENVDTTTLFVRNL 621
Query: 624 NFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCR 680
NF T + L + F +G LS +V K G+ +SMGFGFIEF + A +
Sbjct: 622 NFSTTSQRLTEVFKPL--DG-FLSARVNTKTDPKKPGQVLSMGFGFIEFRTKSQAQAAIK 678
Query: 681 DLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSS------TKLLVRNVAFEAQR 729
+ G LD H L+++ H D K+ E D++ TKL+V+N+ FEA +
Sbjct: 679 AMDGYTLDNHKLLVKASHKGADAAEEKRKE-DRAKKLAGKRTKLIVKNLPFEASK 732
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKNLP ++ +R F G++ ++ + D +R FAF F T +EAE A++
Sbjct: 719 TKLIVKNLPFEASKSDIRKLFGTYGQLRSVRMPKKFDHSTRGFAFADFITAREAENALEA 778
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ + A
Sbjct: 779 LKDTHLLGRRLVIDFA 794
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
+VKNLP+++S+ ++ K+FG +G L V +P ST+ A F+ EA A + L
Sbjct: 721 LIVKNLPFEASKSDIRKLFGTYGQLRSVRMPKKFDHSTRGFAFADFITAREAENALEALK 780
Query: 552 YKRYKGVPLYLEWA 565
G L +++A
Sbjct: 781 DTHLLGRRLVIDFA 794
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ S R+F++ LP TEDE + HF +++ ++ + I Y+ Y PE A +
Sbjct: 1 MASSRIFIKGLPPNITEDEFKTHFGANQEITDAKLI------SHRRIGYIGYKTPEEAVK 54
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
A++ + S + + V AR
Sbjct: 55 AVKYFNKSFVRLSKIGVEIAR 75
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
L VKNL F+ ++RK FG + G++ SV++ K + + GF F +F + A N
Sbjct: 721 LIVKNLPFEASKSDIRKLFGTY---GQLRSVRMPKKFDHS---TRGFAFADFITAREAEN 774
Query: 678 VCRDLQGTILDGHALILQLC 697
L+ T L G L++
Sbjct: 775 ALEALKDTHLLGRRLVIDFA 794
>gi|261188230|ref|XP_002620531.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis
SLH14081]
gi|239593278|gb|EEQ75859.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis
SLH14081]
gi|239609317|gb|EEQ86304.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis ER-3]
gi|327354414|gb|EGE83271.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis ATCC
18188]
Length = 825
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 241/769 (31%), Positives = 399/769 (51%), Gaps = 96/769 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D LR FS + ++TDA ++ R+ F+GF+T A++A Y
Sbjct: 5 TRVFVSGLPPTFSNDDLRKHFSTRYQVTDAHVI-----PKRRIGFVGFKTPTLAQDAANY 59
Query: 61 FNKSYLDTCRISCEIARKV-GD-PNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTI 118
FNK+Y+ +I+ E+AR V GD P +P SR++ A K+
Sbjct: 60 FNKTYIRMSKIAVEMARPVDGDSPVSGKPNSRHATS--------------ANSTTLKRKH 105
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSI-T 177
++V + DP+L E+L MQP +KSK WA+D ++ ++ + + S I + K E +I T
Sbjct: 106 DQVEQKQDPKLQEYLAAMQPAMKSKTWADDGIV-VITNGVSTDSAQIQPSSKTEEPNIKT 164
Query: 178 LHVKSD------------KSNVITDSQATEKSKN----------AAADELMSDMDYFKSR 215
++ D +NV D+ EK+++ + + SDMD+ +SR
Sbjct: 165 KRLRPDHKPAFKKQQRERPNNVSEDNSIAEKARSIEPENEPEATSVEEAPKSDMDWLRSR 224
Query: 216 VKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDAN 275
+ E ED+ G E EE E++D+ +S G +E +
Sbjct: 225 TSRLLGLVE-EDEDEGGPSTAQIREIEESEDSDY-------------ESTRRGNAQEASP 270
Query: 276 GEIVDPGNPSSSSKDVQQ---EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVV 332
+P NPS ++ ++ E+GRLFVRNL Y A+E +L FS FG + EVH+
Sbjct: 271 PVQKEPPNPSDKNESFDANIGQLRETGRLFVRNLLYNASESDLESLFSPFGKIDEVHVAF 330
Query: 333 DKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNST 390
D +SKG AYV YA PE+A +A + LD +FQGRLLH++PA KK+ D+ EL
Sbjct: 331 DTRHSKSKGFAYVQYADPEAAIQAFKTLDGKVFQGRLLHILPASSKKTYKLDEYEL---- 386
Query: 391 SQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL 450
+K +++++ ++ EA+ + +WNSL+M D V+ +++ + G+SKS+LLD ++D
Sbjct: 387 ---SKLPLKKQQQIKRKQEAASSNFSWNSLYMNADAVMSSVSERLGISKSELLDPTSSDA 443
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AV+ A ET VI ETK ++ GVN+ S ++ +R N LVKN + +
Sbjct: 444 AVKQAHAETHVIQETKAYFSSHGVNLDSFKK--------RERGNTAILVKNFSFGVKADD 495
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L ++F FG + ++++P + T+A+V F+ E AFKGLAY++ L+LE AP D+
Sbjct: 496 LRQLFEPFGQIKRLLMPPSGTIAIVEFVMADECQKAFKGLAYRKLGDSILFLERAPKDLF 555
Query: 571 SQSST-SKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCD 629
+++T ++ V+ + + + + T+ + +E+ +LFV+NLNF T +
Sbjct: 556 DENATATRVIAPPPKVISQTYSTSDIFK-----ATETEEAESPLETSTLFVRNLNFSTTN 610
Query: 630 ENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTI 686
L + F +G LS +VK + G+ +SMGFGF+EF S A +QG
Sbjct: 611 ARLTEVF--QPLDG-FLSARVKTKTDPKRPGETLSMGFGFVEFRSSAQARAALAAMQGYK 667
Query: 687 LDGHALILQLCHAKKDEQVVKKAEKDKS-----STKLLVRNVAFEAQRK 730
LD H L+++ H D ++ + + TK+L++N+ F+A +K
Sbjct: 668 LDQHELVIKASHKAVDAAEERRRQDNAKKLAMRGTKILIKNLPFQATKK 716
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R+ FS G++ ++ + DG +R FAF F + +EAE A+
Sbjct: 702 TKILIKNLPFQATKKDIRNLFSAYGKLRSVRVPQKFDGTARGFAFADFVSAREAENAMDA 761
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ + A
Sbjct: 762 LKNTHLLGRRLVLDFA 777
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E+ R+FV LP T + D+LR+HFS V++ H++ KR I +V + P A A
Sbjct: 3 ENTRVFVSGLPPTFSNDDLRKHFSTRYQVTDAHVI----PKRR--IGFVGFKTPTLAQDA 56
Query: 357 IEVLDNSIFQGRLLHVMPARH----KKSSDKQELHNSTSQGTKTLKQRREE 403
+ + + + V AR S K ++TS + TLK++ ++
Sbjct: 57 ANYFNKTYIRMSKIAVEMARPVDGDSPVSGKPNSRHATSANSTTLKRKHDQ 107
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ ++ ++NLP+ AT+ ++R FS +G + V V K ++G A+ + A
Sbjct: 698 AMRGTKILIKNLPFQATKKDIRNLFSAYGKLRSVR-VPQKFDGTARGFAFADFVSAREAE 756
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHN 388
A++ L N+ GR L + A + ++E+ N
Sbjct: 757 NAMDALKNTHLLGRRLVLDFASEEAIDPEKEIQN 790
>gi|451993063|gb|EMD85538.1| hypothetical protein COCHEDRAFT_1187995 [Cochliobolus
heterostrophus C5]
Length = 828
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 248/766 (32%), Positives = 387/766 (50%), Gaps = 86/766 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI V+ LP TED +R F+ K +TD K R+ ++G++T ++A +A+KY
Sbjct: 4 SRIFVRGLPPKFTEDDVRKHFA-KFPVTDVKFF-----PHRRIGYVGYKTPEDAAKAVKY 57
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNK+++ +I EIAR P +P+ + L+K +++ K P+ R E + K
Sbjct: 58 FNKTFIKLTKIYVEIAR----PELPKSRRQQKLEKSAPTNDEYKPPL----RQENELKRK 109
Query: 121 VTEND-DPQLLEFLQVMQPRVKSKMWAN------------DTLIGLMA------------ 155
E + DP+L EFL+V QP K+K+WAN DT + +A
Sbjct: 110 RDETEQDPRLKEFLEVYQPPSKTKIWANGESHVDEANTAEDTAVPEIAVPEEESDDEYQV 169
Query: 156 -DQKAKVSENISQAIKGGEKSITLHVKSDKSNVITDS-QATEKSKNAAADE--LMSDMDY 211
+K KV+ + + S T D + + D+ +A E + A E +SDMD+
Sbjct: 170 ISKKPKVAAEPTATPAPAQPSPTEEPAKDPVDAVVDTDEAMEDVQEAPIAEQGPVSDMDW 229
Query: 212 FKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGE 271
+SR + E ++ A + + + DS EE ++ + S E
Sbjct: 230 LRSRTNRVLELIEDDEVPAANVPASQAPAPQPPRAVE---DSAEEVEA--QPSPPQPTAE 284
Query: 272 EDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
+ P +++ D + ++ E+GRL++RNL Y TEDE+RE FSK G + EVH+
Sbjct: 285 Q-----------PETAAPDEEDKIRETGRLYLRNLHYEVTEDEIREQFSKHGALEEVHVP 333
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+ K + KG A+V + P A A DN+IFQGRLLH++ A+ KK + E S
Sbjct: 334 LKKADGKGKGFAFVQFQNPNDAVEAYLDNDNTIFQGRLLHIISAKAKKDTKLDEYEISKL 393
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLA 451
LK+++E RK S A WNSL+M D V+ +A + G+SK++LLD ++D A
Sbjct: 394 ----PLKKQKEIRRKQSAAKAVFN-WNSLYMNADAVMSTVADRMGISKAELLDPTSSDAA 448
Query: 452 VRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGEL 511
V+ A ET +I ETK GV++ + + + G + LVKN+P+ + EL
Sbjct: 449 VKQAHAETHIIQETKSYFAQHGVDLEAFQRSAKG--------DLAILVKNIPHGVTADEL 500
Query: 512 AKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS 571
K+F + G+++K ++P T A+V F +A AAF L+Y++ K LYLE AP D+
Sbjct: 501 RKLFEEHGTVNKFLMPPTGMTAIVEFANVAQAKAAFMSLSYRKMKDSILYLEKAPKDLFK 560
Query: 572 QSSTSKGNQKN-DAVVGEHDAKRALLEQQLEGVTDADID---PDRVESRSLFVKNLNFKT 627
+ + Q A V L TD +D P+ + +L+V+NLNF T
Sbjct: 561 EGVATNFVQTTPSASVSTSTQPGTKL-----SATDLLVDIPEPEATNTATLYVRNLNFST 615
Query: 628 CDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTIL 687
E L + F + + R VK K K G +SMGFGF+EF+S ETAT R + G L
Sbjct: 616 STERLTEAF-KPLSGFRSAKVKTKVDPKRGV-LSMGFGFVEFNSPETATAALRAMDGYDL 673
Query: 688 DGHALILQLCHAKKD---EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+GH L ++ H D E+ + A K +STK++++N+ FEA +K
Sbjct: 674 EGHKLQIKASHRGADAAEERRNEDAAKKAASTKIIIKNLPFEASKK 719
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 173/437 (39%), Gaps = 79/437 (18%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+FVR LP TED++R+HF+KF V D + I YV Y PE A++
Sbjct: 1 MESSRIFVRGLPPKFTEDDVRKHFAKFP-------VTDVKFFPHRRIGYVGYKTPEDAAK 53
Query: 356 AIEVLDNSIFQGRLLHVMPARHK--KSSDKQELHNSTS---QGTKTLKQRREEERKASE- 409
A++ + + + ++V AR + KS +Q+L S + L+Q E +RK E
Sbjct: 54 AVKYFNKTFIKLTKIYVEIARPELPKSRRQQKLEKSAPTNDEYKPPLRQENELKRKRDET 113
Query: 410 --------------ASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIA 455
TK W + D N A V + + + E++D
Sbjct: 114 EQDPRLKEFLEVYQPPSKTKIWANGESHVDEA--NTAEDTAVPEIAVPEEESDD------ 165
Query: 456 LGETQVIAETKK-----ALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
E QVI++ K T A S EE + D + ++ D E
Sbjct: 166 --EYQVISKKPKVAAEPTATPAPAQPSPTEEPAKDPVDAVVDTDEAM------EDVQEAP 217
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
+A+ G +D + + + L L+ E E AA + P +E + +V
Sbjct: 218 IAEQ-GPVSDMDWLRSRTNRVLELI---EDDEVPAANVPASQAPAPQPPRAVEDSAEEVE 273
Query: 571 SQSSTSK--GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTC 628
+Q S + Q A E D R E+ L+++NL+++
Sbjct: 274 AQPSPPQPTAEQPETAAPDEEDKIR--------------------ETGRLYLRNLHYEVT 313
Query: 629 DENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILD 688
++ +R+ F +H G + V V LK GF F++F + A D TI
Sbjct: 314 EDEIREQFSKH---GALEEVHVP--LKKADGKGKGFAFVQFQNPNDAVEAYLDNDNTIFQ 368
Query: 689 GHALILQLCHAKKDEQV 705
G L + AKKD ++
Sbjct: 369 GRLLHIISAKAKKDTKL 385
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
+ S + +KNL F+ + +R F + G++ SV+V K S GFGF EF +
Sbjct: 701 KAASTKIIIKNLPFEASKKEVRALFAPY---GQLRSVRVPKKFDAS---SRGFGFAEFTT 754
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAKKDE 703
A N L+ T L G L+L A+ D+
Sbjct: 755 KRDAVNAMNALKNTHLLGRRLVLAFAEAESDD 786
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP ++ +R F+ G++ ++ + D SR F F F T+++A A+
Sbjct: 705 TKIIIKNLPFEASKKEVRALFAPYGQLRSVRVPKKFDASSRGFGFAEFTTKRDAVNAMNA 764
Query: 61 FNKSYLDTCRISCEIARKVGD 81
++L R+ A D
Sbjct: 765 LKNTHLLGRRLVLAFAEAESD 785
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++ ++NLP+ A++ E+R F+ +G + V + D S+G + + A A+
Sbjct: 704 STKIIIKNLPFEASKKEVRALFAPYGQLRSVRVPKKFDAS-SRGFGFAEFTTKRDAVNAM 762
Query: 358 EVLDNSIFQGRLL 370
L N+ GR L
Sbjct: 763 NALKNTHLLGRRL 775
>gi|302676924|ref|XP_003028145.1| hypothetical protein SCHCODRAFT_60180 [Schizophyllum commune H4-8]
gi|300101833|gb|EFI93242.1| hypothetical protein SCHCODRAFT_60180 [Schizophyllum commune H4-8]
Length = 743
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 243/742 (32%), Positives = 379/742 (51%), Gaps = 118/742 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE----ITDAKLMRTKDGKSRQFAFIGFRTEQEAEE 56
SR+ VKNLP YVT DRLR F QKG +TD K+ +DG SR+F F+G++TEQEA+
Sbjct: 2 SRLIVKNLPSYVTPDRLRKHFEQKGAPHGVLTDVKVAMKQDGTSRRFGFVGYKTEQEAQA 61
Query: 57 AIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKK 116
A +YF+K+++D RI + + + RP R L E++V+++ P K+G+
Sbjct: 62 AKEYFHKTFIDATRIFVDAVEGIQE----RPRKRRKLDGEEQVAQEP--PKKDVKKGKDA 115
Query: 117 TIEKVTENDDPQLLEFLQVMQPRV-KSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
K ++ QL E+L++ +PR K WA+ G E
Sbjct: 116 KESKKSK----QLDEYLELTRPRAAKGPAWAD-----------------------GQEAP 148
Query: 176 ITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDD 235
+ + + E K DE SD+D+ K + KD D+AG +
Sbjct: 149 QPAAPVAPGTPAEEEEAMEEDPK----DEGASDLDWLKKHMSKDV-------DTAGRAFE 197
Query: 236 DDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEV 295
D EE+ ++ K S+ S + N P +P+ +S +
Sbjct: 198 QSDDEEDAQQ----------------KSSLQS----NEPNDYAEPPEDPTIAS------I 231
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
++ RLFVRNL ++ T D+L E FS G +S+VHI VD TK+SKG+AYV + PE A +
Sbjct: 232 KQTSRLFVRNLAFSCTTDDLTELFSPLGALSQVHIPVDAMTKQSKGMAYVTFVNPEDAVK 291
Query: 356 AIEVLDNSIFQGRLLHVMPA--RHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
A ++LD FQGR+LH++PA R K+ D + +T+K ++ +RKA +G
Sbjct: 292 AYQMLDKKSFQGRILHLLPAVDRRPKAED-------VTDKKRTVKDEKQAQRKA--LAGK 342
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND-LAVRIALGETQVIAETKKALTNA 472
W+ L+M D V +IA + ++K+ +L+ E +D AVR+AL ET +I ETK L +
Sbjct: 343 EFNWSMLYMNSDAVASSIADRMNIAKASILNPEESDNAAVRLALAETHIIQETKSYLESQ 402
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL 532
GVN++S FS +RS+ LVKN+PY +SE ++ ++F G+L +VI+P T+
Sbjct: 403 GVNLTS---FSTK-----QRSDTAILVKNIPYGTSEAQIHELFEPSGALSRVIVPPAGTI 454
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
A+V F P +A AF+ +AY+R +YLE P+ + G D++
Sbjct: 455 AIVDFENPADAQKAFRAVAYRRLGNSVVYLEKGPAGIFD------GAPAPAPTSAAQDSE 508
Query: 593 RALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK 652
D + +P +LFVKNL+F T E L + FG + V+ K
Sbjct: 509 ------------DGEDEPALAAGTTLFVKNLSFATSAERLTQIFG-GLPGFAYARVQTKP 555
Query: 653 HLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC--HAKKDEQVVKKA 709
K G +SMG+GF+ F + + A + + + G +LDGH L ++ A++D+ K A
Sbjct: 556 DPKRAGGRLSMGYGFVGFKTADAAKSALKGMAGFVLDGHTLQVKFAGRGAEEDDVTRKGA 615
Query: 710 EKDKS-STKLLVRNVAFEAQRK 730
+ KS +TK++V+NV FEA +K
Sbjct: 616 KSAKSTTTKMIVKNVPFEATKK 637
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P T+ +R+ F G++ +L R D ++R FAF+ F T QEAE A+
Sbjct: 623 TKMIVKNVPFEATKKDIRELFGAHGQLKSVRLPRKFDARARGFAFLDFVTRQEAENAMAA 682
Query: 61 FNKSYL 66
++L
Sbjct: 683 LRHTHL 688
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAA 545
K + +VKN+P+++++ ++ ++FG G L V LP + A + F+ EA
Sbjct: 619 KSTTTKMIVKNVPFEATKKDIRELFGAHGQLKSVRLPRKFDARARGFAFLDFVTRQEAEN 678
Query: 546 AFKGLAYKRYKGVPLYLEWA 565
A L + G L LEWA
Sbjct: 679 AMAALRHTHLLGRHLVLEWA 698
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ V+N+P+ AT+ ++RE F G + V + D R++G A++ + + A A+
Sbjct: 624 KMIVKNVPFEATKKDIRELFGAHGQLKSVRLPRKFDA-RARGFAFLDFVTRQEAENAMAA 682
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 683 LRHTHLLGRHL 693
>gi|397643662|gb|EJK76002.1| hypothetical protein THAOC_02254 [Thalassiosira oceanica]
Length = 869
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 263/781 (33%), Positives = 415/781 (53%), Gaps = 78/781 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG---EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEA 57
+RICVKN+P ED+L+ + ITD ++++TKDG+SR+ AF+GFR+ +A+ A
Sbjct: 13 TRICVKNMPPVYNEDKLKSLLTSSQPSLRITDCRILKTKDGRSRKIAFVGFRSPSQADLA 72
Query: 58 IKYFNKSYLDTCRISCEIA--RKVGDPNMP--RPWSRYSLKKEKEV-----SEDEKNPVL 108
+ YF++S+ T R+S +A +K G P+ RPWS++S+ + +DE
Sbjct: 73 VAYFDRSFAGTARLSVSLAFSKKTG-PSASDYRPWSKHSVGSSRYAKLHNQPKDEPEKDE 131
Query: 109 AAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVK----------SKMWANDTLIGLMADQK 158
A R + +E ++ D + EFL M K SK W+ND M ++
Sbjct: 132 AEDRHD--VVESISSEVDRKKEEFLSAMGVSTKEEGHAKKVSRSKFWSNDDN---MTEEN 186
Query: 159 AKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKN--AAADELMSDMDYFKSRV 216
+ + + G E+ + S S+ ++ N + ++ SDMD+ KS+
Sbjct: 187 GRPT---THRDDGSEQDGSEDSDSGDSDSVSSDSDRGDRDNEESTGTKVPSDMDFLKSKQ 243
Query: 217 KKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-DAN 275
K SE +D S+ DD + E++ ++ CD + ++ + G+ +AN
Sbjct: 244 IKADELSEDDDSSSAVSSSDDSESDSSSSESEDEDNA---CDEVKSSTVANRSGQPVEAN 300
Query: 276 GEIVDPGNPSSSSKDVQQEVLE-SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDK 334
G G +S D Q +L+ + RLFVRNLP+T TE+EL E FS FG ++ VHI VD
Sbjct: 301 GNESSRGGGEAS--DQTQPLLQLADRLFVRNLPFTTTEEELHETFSHFGQINSVHIPVD- 357
Query: 335 DTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKK--SSDKQELHNSTSQ 392
D KR+KG A+V + + A A+E +D FQGRL+H+MPA+ K + D+ + + S +
Sbjct: 358 DAKRNKGYAFVEFESKKDAKIAMESMDGEDFQGRLIHIMPAKPTKERALDENDPNLSYKE 417
Query: 393 GTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE----AN 448
++Q+ EA T W++ F+R D VV+NI+ + GV+K D+L+ + +
Sbjct: 418 KQAIIRQK--------EAEKTTIGWSATFLRGDAVVDNISDRLGVTKGDVLNVKDGISSG 469
Query: 449 DLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSE 508
+ AVR+ALGET +I+E + GV+V +LE T+G+KRS + LVKNLPYD+
Sbjct: 470 NAAVRLALGETHIISENVSFFKSHGVDVKALEASGGKSTNGVKRSKTMILVKNLPYDTLL 529
Query: 509 GELAKMFGKFGS--LDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAP 566
+L K+F G +++LP +K+ ALV + V+A AF+ L+YK++K VPLYLEWAP
Sbjct: 530 EDLTKVFHGIGGDVPQRILLPPSKSAALVEYGHAVDARRAFRRLSYKKFKHVPLYLEWAP 589
Query: 567 SDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDP-----DRVESRSLFVK 621
D S S ++ ++ D KR E D DP D S++++VK
Sbjct: 590 MDEEFDRSVSGQSETQES---RDDPKRQTHLSANERNQPVDEDPANDAADVGTSQAIYVK 646
Query: 622 NLNFKTCDENLRKHFGEHIKEGRILSVKVK-----KHLKNG------KNVSMGFGFIEFD 670
NLNF T + LR F + E R + + K ++ +G + +SMGFGF+EF
Sbjct: 647 NLNFATSEVQLRDAFSQAGLEPRAVKIPTKAAPSRRNASDGGEGSEVRQLSMGFGFVEFS 706
Query: 671 SVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSS--TKLLVRNVAFEAQ 728
S + A + +QG ++DGH+L ++L + E DKS+ TK++VRNV FEA
Sbjct: 707 SEDEALKAIKKMQGKLVDGHSLEIKLSTKSLSGGNSRAPEVDKSARKTKIMVRNVPFEAT 766
Query: 729 R 729
R
Sbjct: 767 R 767
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
+V+N+P++++ EL ++FG FG L KV LP + + A F+ EA A L+
Sbjct: 756 IMVRNVPFEATRSELLQLFGSFGQLKKVRLPKKFDGTHRGFAFCEFVTSKEARNAMTSLS 815
Query: 552 YKRYKGVPLYLEWA 565
G L LEWA
Sbjct: 816 QTHLYGRRLVLEWA 829
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I V+N+P T L F G++ +L + DG R FAF F T +EA A+
Sbjct: 754 TKIMVRNVPFEATRSELLQLFGSFGQLKKVRLPKKFDGTHRGFAFCEFVTSKEARNAMTS 813
Query: 61 FNKSYLDTCRISCEIARKVGDPN 83
++++L R+ E A G N
Sbjct: 814 LSQTHLYGRRLVLEWAEHCGGEN 836
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ VRN+P+ AT EL + F FG + +V + D +G A+ + + A A+
Sbjct: 755 KIMVRNVPFEATRSELLQLFGSFGQLKKVRLPKKFDGTH-RGFAFCEFVTSKEARNAMTS 813
Query: 360 LDNSIFQGRLLHVMPARH 377
L + GR L + A H
Sbjct: 814 LSQTHLYGRRLVLEWAEH 831
>gi|296818279|ref|XP_002849476.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
gi|238839929|gb|EEQ29591.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
Length = 808
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 250/766 (32%), Positives = 383/766 (50%), Gaps = 104/766 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP +T D+LR+ F+Q+ E+TDA ++ +R+ F+GF+ AE AIKY
Sbjct: 4 TRVFVSGLPPSLTSDKLRNHFAQRFEVTDAHVI-----PNRRIGFVGFKGPNLAENAIKY 58
Query: 61 FNKSYLDTCRISCEIARKV-------GDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRG 113
FNK++++ RIS E+AR + G+ ++ +RY K + P L KR
Sbjct: 59 FNKTFINMSRISVEMARAIFSKVDANGEADL---RARY----RKHLDAKSHPPSLKRKRP 111
Query: 114 EKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQK-------------AK 160
+ T+E D L E+L MQP KS+ WA D+ L Q+ +
Sbjct: 112 SQDTVE------DSNLQEYLTAMQPPTKSRTWA-DSGSSLAVPQEQEREPMIDAEKENPE 164
Query: 161 VSENISQAIKGGEKSITLHVKSDKSNVIT--DSQATEKSKNAAADELMSDMDYFKSRVKK 218
+I G + TL ++S + T DS +++ A +D D+ +S+ +
Sbjct: 165 TKSDIDMQNTGEPATATLAMESQTPDTKTVGDSDPGNATEHPAP---QNDDDWLRSKTSR 221
Query: 219 DWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEI 278
+ EDD E + +++ D+I K H DAN E
Sbjct: 222 LLGLLDEEDDMLAQTWAGKASENTTDRAQAPPAETSTTQDAIEKQD-HVSEPAPDANIE- 279
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
+ +GRLF+RNLPY A+ED+L FS+FG + E H+ +D
Sbjct: 280 ---------------SIRLTGRLFIRNLPYNASEDDLSAAFSRFGKIEETHVAIDTRHST 324
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLK 398
SKG AY+ Y ++A A + LD FQGRL+H++PA KK+ E S LK
Sbjct: 325 SKGFAYIQYVESDAAIEAYKQLDGKDFQGRLMHILPASSKKTYKLDEFEIS----KLPLK 380
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGE 458
++++ +RKA EA+ +T +WNSL+M D V+ ++A + GVSKS LLD ++D AV+ A E
Sbjct: 381 KQQQIKRKA-EAASSTFSWNSLYMNTDAVMASVADRLGVSKSQLLDPTSSDAAVKQAHAE 439
Query: 459 TQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKF 518
T VI ETK + GVN+ S ++ +R N L+KN Y S ++ K+ F
Sbjct: 440 THVIQETKAYFSANGVNIESFKQ--------RERGNTALLLKNFTYGVSSEDIKKLCEPF 491
Query: 519 GSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST-SK 577
G L ++++P + T+A+V F P EA AFKGLAYKR LY+E AP D+ T +
Sbjct: 492 GQLTRLLMPPSGTIAIVEFAMPDEAQRAFKGLAYKRLGESILYVEKAPKDLFEGGPTVTM 551
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADI----DPDR-VESRSLFVKNLNFKTCDENL 632
+ N+ VV +G + +D +P+ +ES +LFV+NLNF T D L
Sbjct: 552 PSLLNEKVVS-------------QGFSTSDTFRADEPEAPMESATLFVRNLNFITTDTGL 598
Query: 633 RKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDG 689
F +G +S +VK K G+ +SMGFGF+EF S A + L G LD
Sbjct: 599 SDLF--RPLDG-FISAQVKTRPDPKKPGERLSMGFGFVEFKSRAQAEAALKALNGYKLDQ 655
Query: 690 HALILQLCHAKKD--EQVVKKAEKDKSS---TKLLVRNVAFEAQRK 730
H L+++ H D EQ ++ K+S TK++++N+ F+A +K
Sbjct: 656 HELVIKPSHKGMDAAEQRRREDNAKKASAKRTKIIIKNLPFQATKK 701
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ + F+ G++ ++ + D +R FAF F + +EAE A+
Sbjct: 687 TKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTARGFAFADFVSSREAENAMDA 746
Query: 61 FNKSYLDTCRISCE-IARKVGDP 82
++L R+ E ++ + DP
Sbjct: 747 LRNTHLLGRRLVLEFVSEEATDP 769
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E R+FV LP + T D+LR HF++ V++ H++ ++ I +V + P A
Sbjct: 1 MEGTRVFVSGLPPSLTSDKLRNHFAQRFEVTDAHVIPNRR------IGFVGFKGPNLAEN 54
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
AI+ + + + V AR
Sbjct: 55 AIKYFNKTFINMSRISVEMAR 75
>gi|365982081|ref|XP_003667874.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
gi|343766640|emb|CCD22631.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
Length = 843
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 250/796 (31%), Positives = 416/796 (52%), Gaps = 106/796 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFF------SQKGE----ITDAKLMRTKDGKSRQFAFIGFRT 50
SRI VK LP ++T+D L+ F + KG+ ITD K++R ++G+SR+FAFIG+R
Sbjct: 2 SRIIVKGLPTFLTDDNLKTHFNKRLSTTHKGKSDNLITDVKVLRDRNGESRRFAFIGYRN 61
Query: 51 EQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRP--------WSRYSLKKEKEVSED 102
E++A +A+ YFN SY++T +I +A+ DP +P+P + R+ K+EK + E+
Sbjct: 62 EEDAFDAVNYFNGSYINTAKIEVSMAKSFADPRVPQPMKEKKREAYKRFREKEEKLLGEE 121
Query: 103 EKNPVLAAKRGEKKTIEKVTE-NDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKV 161
+ ++K I E + QL EF++ M+P K W +KA
Sbjct: 122 NDKKLRKKNDVKEKHISIDAEIQKNKQLQEFIETMKPSNKVPSW-----------EKATT 170
Query: 162 SENISQAIKGGEKSITLHVKSDKSNVITDSQA-TEKSKNAAADELMSDMDYFKSRVKKDW 220
+ S +++ +K + ++++ + A KS E SD DY K D
Sbjct: 171 DDFDSASVRDADKEGDDDDEMPGNSLLAQALALNNKSDTVKLQENESDDDYADFNAKNDD 230
Query: 221 SD--SESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEI 278
++ E+E + D + +G+++E +++ D D + + S+ GE +A
Sbjct: 231 NEDVEETEPMMSLDQVEPTEGDDKELAKDEKVSD----LDWLKQRSVRIREGESEA---- 282
Query: 279 VDPGNPSSSS--KDVQQEVLE---------------------------SGRLFVRNLPYT 309
PS S+ K ++QE E +GRLF+RN+ Y+
Sbjct: 283 ---AKPSRSTEQKPIEQEEKEKDAVTEEITEQEHEINEEEKIIEKINNTGRLFLRNILYS 339
Query: 310 ATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRL 369
+TE++ R+ FS FG + EVHI +D T +SKG AY+L+ P+ A +A LD IFQGRL
Sbjct: 340 STEEDFRKLFSPFGELEEVHIALDTRTGQSKGFAYILFKDPKDALQAYIELDKQIFQGRL 399
Query: 370 LHVMPARHKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTV 427
LH++PA +K+ D+ +L N LK++RE ++K AS T +WNSL+M D V
Sbjct: 400 LHILPADERKTHRLDEFDLKNM------PLKKQRELKKK-DNASRQTFSWNSLYMSQDAV 452
Query: 428 VENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKT 487
+ ++A K G+ KS+L+D E + AV+ AL E VI + +K + GV+++ E
Sbjct: 453 LGSVASKLGLKKSELIDPENSSSAVKQALAEAHVIGDVRKYFESKGVDLTKFAELKGSD- 511
Query: 488 DGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAF 547
+R + LVKN P+ ++ E+ ++F FG ++++++P+ T+A+V F + AAF
Sbjct: 512 ---QRDHRTILVKNFPFGTTREEIGELFSPFGEIERLLMPAAGTIAIVQFRDVTSGRAAF 568
Query: 548 KGLAYKRYKGVPLYLEWAPSDVLSQSSTS------KGNQKNDAVVGEHDAKRALLE---- 597
LA+KR+K +YLE P D ++++ + + NQ AVV D+ + +++
Sbjct: 569 SKLAFKRFKDGIIYLEKGPKDCFTRNAETSDSVDVEANQT--AVVEIKDSVKDIMDGTKE 626
Query: 598 -QQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS-VKVKKHLK 655
+ +A +D V S+F+KNLNF T +L F + G +++ VK K K
Sbjct: 627 GDETGEGEEAIVDGPTV---SIFIKNLNFSTSSSDLTSRF--KVFNGFVVAQVKTKPDPK 681
Query: 656 N-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS 714
+ K +SMGFGF EF + E A V + GT++DGH + L+L H + + ++
Sbjct: 682 HPNKTLSMGFGFAEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQGTKGNNTSSKNKTK 741
Query: 715 STKLLVRNVAFEAQRK 730
S K++V+N+ FEA RK
Sbjct: 742 SAKIIVKNLPFEATRK 757
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 282 GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
GN +SS + S ++ V+NLP+ AT ++ E F+ FG + V V K K ++G
Sbjct: 731 GNNTSSKNKTK-----SAKIIVKNLPFEATRKDVFELFNSFGQLKSVR-VPKKFDKSARG 784
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKT 396
A++ + +P+ A A++ L GR L + A+ + ++E+ T + KT
Sbjct: 785 FAFIEFLLPKEAENAMDQLQGVHLLGRRLVMQYAQEDAADAEEEIARMTKKVQKT 839
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 611 DRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFD 670
++ +S + VKNL F+ +++ + F G++ SV+V K + GF FIEF
Sbjct: 738 NKTKSAKIIVKNLPFEATRKDVFELFNSF---GQLKSVRVPKKFDKS---ARGFAFIEFL 791
Query: 671 SVETATNVCRDLQGTILDGHALILQLCH---AKKDEQVVKKAEKDKSSTKL 718
+ A N LQG L G L++Q A +E++ + +K + +++L
Sbjct: 792 LPKEAENAMDQLQGVHLLGRRLVMQYAQEDAADAEEEIARMTKKVQKTSRL 842
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
+VKNLP++++ ++ ++F FG L V +P S + A + FL P EA A L
Sbjct: 746 IVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFIEFLLPKEAENAMDQLQG 805
Query: 553 KRYKGVPLYLEWAPSD 568
G L +++A D
Sbjct: 806 VHLLGRRLVMQYAQED 821
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I VKNLP T + + F+ G++ ++ + D +R FAFI F +EAE A+
Sbjct: 743 AKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFIEFLLPKEAENAMDQ 802
Query: 61 FNKSYLDTCRISCEIAR 77
+L R+ + A+
Sbjct: 803 LQGVHLLGRRLVMQYAQ 819
>gi|50285445|ref|XP_445151.1| hypothetical protein [Candida glabrata CBS 138]
gi|74691154|sp|Q6FXP4.1|MRD1_CANGA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49524454|emb|CAG58051.1| unnamed protein product [Candida glabrata]
Length = 861
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 256/786 (32%), Positives = 419/786 (53%), Gaps = 91/786 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQK-----------GEITDAKLMRTKDGKSRQFAFIGFR 49
SR+ VK LP Y+TE L+ F+++ G ITD ++++ ++GKSR+FAFIG++
Sbjct: 2 SRVIVKGLPIYLTEPELQKHFNKRLITTHATSNVDGLITDLRILKNREGKSRRFAFIGYK 61
Query: 50 TEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLA 109
EQ+A +A+ YF+ S++ T +I ++A+ DP +P+ S+K++K +
Sbjct: 62 NEQDALDAVNYFDGSFIYTSKIEVDMAKSFADPRVPK-----SMKEKKREALKRLREKEE 116
Query: 110 AKRGEKKTIEKVTEND-----------DPQLLEFLQVMQPRVKSKMWANDTLI-----GL 153
EK KV + D QL EF++ M+P ++ W T GL
Sbjct: 117 KLLEEKNKKLKVQDTKSKINIDAEIEKDKQLKEFIETMKPSAQTSSWDKITETAEPESGL 176
Query: 154 MADQKA--KVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDY 211
+Q+ + S N++ +K H S K DS S N A + SD
Sbjct: 177 AEEQELDDEESSNVNPLLK--------HALSMKKGDENDSDDEYMSFNNADSKAGSDESN 228
Query: 212 FKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGE 271
+ ++ S+ +++ + + +DDG + EE +D + I+++ VGE
Sbjct: 229 EEEKMI-SLSELPVQNEESSAEPKEDDGLAKNEEISDMDWIKQRRVR--IREN-GEKVGE 284
Query: 272 EDANG---EIVDPGNPSSSSKDVQQEVLE----------SGRLFVRNLPYTATEDELREH 318
E A + + + ++ ++++Q+E+ + +GRLF+RN+ Y++TED+ ++
Sbjct: 285 EFATNVQDKESEENSQATPAEELQEEIPDEEQAIAKIQKTGRLFLRNILYSSTEDDFKKL 344
Query: 319 FSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHK 378
FS +G + EVH+ VD T SKG AYVL+A PE A +A LD IFQGRLLH++ A
Sbjct: 345 FSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQAYIELDKQIFQGRLLHILAADEM 404
Query: 379 KSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHG 436
K D+ +L N LK++RE ++KA+ + T +WNSL+M D V+ ++A K G
Sbjct: 405 KDHRLDEFDLKNM------PLKKQRELKKKAAASK-ATFSWNSLYMNQDAVLGSVAAKLG 457
Query: 437 VSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHV 496
V K+DL+D E ++ AV+ AL E VI + +K GV+ L +FS K+ +R + V
Sbjct: 458 VQKADLIDPENSNSAVKQALAEAHVIGDVRKYFETKGVD---LTKFSNLKSPS-QRDDRV 513
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYK 556
LVKN P+ ++ EL ++F FG L+++++P T+A+V F + +AF LA+KR+K
Sbjct: 514 ILVKNFPFGTTREELGELFVPFGKLERLLMPPAGTIAIVQFRDIASGRSAFSKLAFKRFK 573
Query: 557 GVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRA------LLEQQLEGVTDADIDP 610
G +YLE P D +++++++ ++D E AK A LLE T+ D
Sbjct: 574 GTVIYLEKGPKDCFTKAASNEDAMEHDE---EKSAKEAGPSSADLLESVSSKKTEDKEDE 630
Query: 611 DRV----ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGF 664
D + S+F+KNLNFKT + L F + G +++ VK K K K +SMGF
Sbjct: 631 DEQVVDGPTVSIFIKNLNFKTTSQQLTDRF--KVFSGFVVAQVKTKPDPKQKNKVLSMGF 688
Query: 665 GFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVA 724
GF+EF + E AT V + GT++DGH + L+L H + + +K K + K++V+N+
Sbjct: 689 GFVEFRTKEQATAVISAMDGTVIDGHKIQLKLSHRQGNAGSQEK--KKAKNGKIIVKNLP 746
Query: 725 FEAQRK 730
FEA RK
Sbjct: 747 FEATRK 752
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+G++ V+NLP+ AT ++ E F+ FG + V V K K ++G A+V + +P+ A A+
Sbjct: 737 NGKIIVKNLPFEATRKDVFELFNSFGQLKSVR-VPKKFDKSARGFAFVEFVLPKEAENAM 795
Query: 358 EVLDNSIFQGRLLHVMP 374
+ L GR L + P
Sbjct: 796 DQLQGVHLLGRRLVMQP 812
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 483 SAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVF 537
+AG + K N +VKNLP++++ ++ ++F FG L V +P S + A V F
Sbjct: 726 NAGSQEKKKAKNGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEF 785
Query: 538 LEPVEAAAAFKGL 550
+ P EA A L
Sbjct: 786 VLPKEAENAMDQL 798
>gi|330935683|ref|XP_003305080.1| hypothetical protein PTT_17827 [Pyrenophora teres f. teres 0-1]
gi|311318026|gb|EFQ86793.1| hypothetical protein PTT_17827 [Pyrenophora teres f. teres 0-1]
Length = 825
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 247/777 (31%), Positives = 385/777 (49%), Gaps = 111/777 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI V+ LP +ED +R F+ K ITD K R+ ++G++T ++A +A+KY
Sbjct: 4 SRIFVRGLPPKFSEDDVRKHFA-KFPITDVKFF-----PHRRIGYVGYKTPEDAAKAVKY 57
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEV-SEDEKNPVLAAKRGEKKTIE 119
FNK+++ +I EIAR + D +P+ SR LK EK S DE P R E
Sbjct: 58 FNKTFIKLTKIYAEIARPIADKELPK--SRRQLKLEKSAPSNDEYRP----PRQENDLKR 111
Query: 120 KVTEND-DPQLLEFLQVMQPRVKSKMWAN------DTLIGL------------------- 153
K E + DP+L EFL+V QP K+ +WAN + I
Sbjct: 112 KRNEAEQDPKLKEFLEVYQPPSKTSLWANGDEQLNEAPIAAADEAVAEVAVPEDESDDDY 171
Query: 154 -MADQKAKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNA-AADE-LMSDMD 210
+ +K K++ + + + ++ I S+ E + A AAD+ +SD+D
Sbjct: 172 QVISKKPKIAPEPAASAPTQPTPVEQPAPEPQAQNIDGSEPMEDVQEASAADQGPVSDVD 231
Query: 211 YFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVG 270
+ +SR + E DD+ G S ++ I
Sbjct: 232 WLRSRTNRVLELVE-------DDEVPSAGA------------------SALQAPIPQPPA 266
Query: 271 EEDANGEIVD----PGNPSS-----SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSK 321
A+ E+V+ P P+ ++ D + ++ E+GRL++RNL Y TEDE+R+ FSK
Sbjct: 267 ATKASQEVVEAQLEPEQPTEEQAVVAAPDEEDKIRETGRLYLRNLHYEVTEDEIRQQFSK 326
Query: 322 FGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS 381
G + EVH+ + K + KG A+V +A P A A DN+IFQGRLLH++ A+ KK +
Sbjct: 327 HGALEEVHVPLQKADGKGKGFAFVQFANPSDAVEAYLDNDNTIFQGRLLHIISAKAKKDT 386
Query: 382 DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSD 441
E S K ++++E RK A+ T WNSL++ D V+ IA + G+SK++
Sbjct: 387 KLDEYEIS-----KLPLKKQKEIRKKQNAAKATFNWNSLYLNADAVMSTIAGRMGISKAE 441
Query: 442 LLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKN 501
LLD + D AVR A ET +I ETK GV++ + + + G + LVKN
Sbjct: 442 LLDPTSADAAVRQAHAETHIIQETKSYFAQHGVDLEAFQRSAKG--------DLAILVKN 493
Query: 502 LPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLY 561
+P+ + EL K+F + G++ K ++P T A+V F +A AF L+Y++ K LY
Sbjct: 494 VPHTVTPDELRKLFEEHGTVTKFLMPPTGMTAIVEFSNVAQAKTAFMSLSYRKMKDSILY 553
Query: 562 LEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADI-----DPDRVESR 616
LE AP D+ + V + + EQ + T D+ +P+ +
Sbjct: 554 LEKAPKDLFKEG------------VATNFVQTTFSEQPVIKPTATDLLVDAPEPEATNTA 601
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+L+V+NLNF T E L + F + + R +VK K K G +SMGFGF+EF+S ETAT
Sbjct: 602 TLYVRNLNFSTTIERLTEAF-KPLSGFRSATVKTKMDPKRGV-LSMGFGFVEFNSPETAT 659
Query: 677 NVCRDLQGTILDGHALILQLCHAKKD---EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
R + G L+GH L+++ H D E+ + A K +STK++++N+ FEA +K
Sbjct: 660 AALRAMDGHDLEGHKLLIKASHKGADAAEERRNEDAAKKAASTKIIIKNLPFEASKK 716
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+FVR LP +ED++R+HF+KF + D + I YV Y PE A++
Sbjct: 1 MESSRIFVRGLPPKFSEDDVRKHFAKFP-------ITDVKFFPHRRIGYVGYKTPEDAAK 53
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
A++ + + + ++ AR
Sbjct: 54 AVKYFNKTFIKLTKIYAEIAR 74
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
+ S + +KNL F+ +++R F + G++ SV+V K S GFGF EF +
Sbjct: 698 KAASTKIIIKNLPFEASKKDVRALFTPY---GQLRSVRVPKKFDAS---SRGFGFAEFTT 751
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAKKDE 703
A N L+ T L G L+L A+ D+
Sbjct: 752 KRDAVNAMNALKNTHLLGRRLVLAFAEAESDD 783
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP ++ +R F+ G++ ++ + D SR F F F T+++A A+
Sbjct: 702 TKIIIKNLPFEASKKDVRALFTPYGQLRSVRVPKKFDASSRGFGFAEFTTKRDAVNAMNA 761
Query: 61 FNKSYLDTCRISCEIARKVGD 81
++L R+ A D
Sbjct: 762 LKNTHLLGRRLVLAFAEAESD 782
>gi|154296406|ref|XP_001548634.1| hypothetical protein BC1G_13029 [Botryotinia fuckeliana B05.10]
gi|347839105|emb|CCD53677.1| similar to multiple RNA-binding domain-containing protein 1
[Botryotinia fuckeliana]
Length = 838
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 265/786 (33%), Positives = 392/786 (49%), Gaps = 118/786 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI +K LP +TED + F K EITDAKL+ R+ +IG++T +EA +A+KY
Sbjct: 4 SRIFIKGLPPNITEDEFKTHFGAKQEITDAKLI-----SHRRIGYIGYKTPEEAAKAVKY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKR-GEKKTIE 119
FNKS++ +I EIAR + D ++P S K ++E E E N + K+ + K E
Sbjct: 59 FNKSFVRMSKIGVEIARPISDASLP-----ISRKAQRE-QERENNKLRQLKQEADAKVSE 112
Query: 120 KVTEND----------DPQLLEFLQVMQPRVKSK--MWANDTLIGLMADQKAKVSENISQ 167
+ DP+L EF++VMQP KS MW T+ M + K+ Q
Sbjct: 113 SLNTGTKRKRSDVDIADPKLQEFMEVMQPASKSNANMWKAGTMDADMEEPPTKL-----Q 167
Query: 168 AIKGGE-------KSITLHVKSDKSNVI------TDSQATEKSKNA-AADELMSDMDYFK 213
AI+ E +S+ K +N I T +T + NA ADE M D
Sbjct: 168 AIEVPEEESDDEYQSVPNKAKKAPANPIEAKAPVTPIPSTVVADNANQADEAMVD----- 222
Query: 214 SRVKKDWSDSESEDDSAGDDD--------DDDDGEEEEEEENDHNGDSNEECDSIIKDSI 265
+ S D A DDD D + E+ N D N+ +++ +
Sbjct: 223 ---------APSNDVEATDDDWLRSHTNRLLDIVDPEDIIPKTQNLDVND-----VEEVV 268
Query: 266 HSGVGEEDANGEI-VDPGNP-------SSSSKDVQQEVLE-SGRLFVRNLPYTATEDELR 316
G + A G++ VD S S D E ++ SGRLFVRNLPY+ATED+LR
Sbjct: 269 AGETGPKAAVGDMAVDEAEAVEEQAENSPSELDATLETIKASGRLFVRNLPYSATEDDLR 328
Query: 317 EHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
+HF ++G + E+H+ VD SKG V Y P +A+ A +D FQGRLLH++PA
Sbjct: 329 KHFEQYGTLEEIHLPVDAKGA-SKGFVLVQYTDPNAAAEAYHNVDGEPFQGRLLHILPAA 387
Query: 377 HKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHG 436
K+ + E + +++ +K +++S +T WNSL+M D V ++A + G
Sbjct: 388 AKRDNKLDEFAIAKLP-----LKKQRLLKKKADSSSSTFNWNSLYMNQDAVNSSVAERLG 442
Query: 437 VSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHV 496
VSKS+LLD + D V+ A+ ET VI ETK N GV++ + ++ G T
Sbjct: 443 VSKSELLDPTSADAGVKQAIAETSVIQETKSYFANNGVDLDAFKKRERGDT--------A 494
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYK 556
LVKN Y + EL KMF +FG + +V++P T T+A+V F +P A AAF LAY+R K
Sbjct: 495 ILVKNFTYGMTLEELRKMFEEFGQVIRVLMPPTGTIAIVEFAQPTHARAAFASLAYRRMK 554
Query: 557 GVPLYLEWAPSDVLSQSSTSKG----NQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR 612
L+LE AP D+ + ++ N+ D + LLE+ GV +
Sbjct: 555 DTVLFLEKAPKDLFTGPPPAQPVATINRNADNAADPKLSTSDLLERD-SGV-------EN 606
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEF 669
V++ +LFV+NLNF T + L + F +G LS +V K G+ +SMGFGFIEF
Sbjct: 607 VDTTTLFVRNLNFSTTSQRLTEIFKPL--DG-FLSARVNTKTDPKKPGQVLSMGFGFIEF 663
Query: 670 DSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSS------TKLLVRNV 723
+ A + + G LD H L+++ H D K+ E D++ TKL+V+N+
Sbjct: 664 RTKSQAQAAIKAMDGYTLDNHKLLVKASHKGADAAEEKRKE-DRAKKLAGKRTKLIVKNL 722
Query: 724 AFEAQR 729
FEA +
Sbjct: 723 PFEASK 728
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKNLP ++ +R F G++ ++ + D +R FAF F T +EAE A++
Sbjct: 715 TKLIVKNLPFEASKSDIRKLFGTYGQLRSVRMPKKFDHSTRGFAFADFITAREAENALEA 774
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ + A
Sbjct: 775 LKDTHLLGRRLVIDFA 790
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ S R+F++ LP TEDE + HF +++ ++ + I Y+ Y PE A++
Sbjct: 1 MASSRIFIKGLPPNITEDEFKTHFGAKQEITDAKLI------SHRRIGYIGYKTPEEAAK 54
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
A++ + S + + V AR
Sbjct: 55 AVKYFNKSFVRMSKIGVEIAR 75
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
+VKNLP+++S+ ++ K+FG +G L V +P ST+ A F+ EA A + L
Sbjct: 717 LIVKNLPFEASKSDIRKLFGTYGQLRSVRMPKKFDHSTRGFAFADFITAREAENALEALK 776
Query: 552 YKRYKGVPLYLEWA 565
G L +++A
Sbjct: 777 DTHLLGRRLVIDFA 790
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
L VKNL F+ ++RK FG + G++ SV++ K + + GF F +F + A N
Sbjct: 717 LIVKNLPFEASKSDIRKLFGTY---GQLRSVRMPKKFDHS---TRGFAFADFITAREAEN 770
Query: 678 VCRDLQGTILDGHALILQLC 697
L+ T L G L++
Sbjct: 771 ALEALKDTHLLGRRLVIDFA 790
>gi|396480635|ref|XP_003841040.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
gi|312217614|emb|CBX97561.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
Length = 831
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 244/768 (31%), Positives = 376/768 (48%), Gaps = 88/768 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI V+ LP TED +R F + ITD K R+ ++G++T Q+A +A+KY
Sbjct: 4 SRIFVRGLPSNFTEDGMRKHFG-RYPITDVKFF-----PHRRIGYVGYKTPQDAAQAVKY 57
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSE-DEKNPVLAAKRGEKKTIE 119
F+K+++ RI EIAR + D +P+ SR K E + DE P KR E +
Sbjct: 58 FDKTFIKLTRIYAEIARPIADKELPK--SRRQQKMEALTPKTDEYVP----KRQENELKR 111
Query: 120 KVTE-NDDPQLLEFLQVMQPRVKSKMWANDTL---------------IGLMADQKAKVSE 163
K E DP+L EFL+V QP K+ +W N L + + D+ +
Sbjct: 112 KRAEVEQDPKLKEFLEVYQPPSKTNIWTNGDLQQAQMPPAADDVVPEVAVPEDESDDEYQ 171
Query: 164 NISQAIKGGEKSITLHVKSDKSNVITDSQATEKSK---------------NAAADELMSD 208
IS+ K E S+ + + ++ + A S A +MSD
Sbjct: 172 VISKKPKVMEPSVQTPAEPETTSTVEQEPAVATSSVDATSGDVMEVDQDIPEAGQGVMSD 231
Query: 209 MDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSG 268
D+ +SR + E DD+ E+ ++ +
Sbjct: 232 ADWLRSRTNRVLELVE----------DDEAPPAANAVPAVKAPPVVEQI--TLQPAPQDA 279
Query: 269 VGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEV 328
E A + N ++S + + + E+GRLF+RNL Y TEDELRE F+K G + EV
Sbjct: 280 PEESKAEAPAAEEPNVDATSAE-EDRIRETGRLFLRNLHYEVTEDELREQFAKHGPLQEV 338
Query: 329 HIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHN 388
H+ ++K + KG A+V + + A A DN+IFQGRLLH++ A+ K+ + E
Sbjct: 339 HVPLNKADGKGKGFAFVQFQNHDHAVEAYLDNDNTIFQGRLLHIISAKAKRDTALDEFEI 398
Query: 389 STSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN 448
S K ++++E R+ EA+ T WNSL+M D V+ +A + G+SKS+LLD ++
Sbjct: 399 S-----KLPLKKQKEIRRKQEAAKTTFNWNSLYMNADAVMSTVASRMGISKSELLDPTSS 453
Query: 449 DLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSE 508
D AV+ A ET +I ETK GV++ + + + G T LVKN+P+ +
Sbjct: 454 DAAVKQAHAETHIIQETKTYFAQQGVDLEAFQRSAKGDT--------AILVKNIPHGVTS 505
Query: 509 GELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSD 568
EL K+F ++G++ + ++P T A++ + EA AF L+Y+R K +YLE AP D
Sbjct: 506 DELRKLFEEYGTVIRFLMPPTGMSAIIEYSNAAEAKTAFASLSYRRLKNSIIYLEKAPKD 565
Query: 569 VLSQSSTSKGNQKNDAVVGEHDAKRA---LLEQQLEGVTDADIDPDRVESRSLFVKNLNF 625
+ + N VG+ K + LLE E P+ ++ +LFV+NLNF
Sbjct: 566 LFKEGVVP--NVPQPVSVGKAGTKLSATDLLEDAPE--------PETSDTATLFVRNLNF 615
Query: 626 KTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGT 685
T E L + F + + R VK K K G +SMGFGF+EF + ETAT R + G
Sbjct: 616 TTTSERLTEAF-KPLSGFRSAKVKTKIDPKRGV-LSMGFGFVEFTNAETATAALRTMDGH 673
Query: 686 ILDGHALILQLCHAKKD---EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
L+GH L ++ H D E+ + A K +STK+L++N+ FEA +K
Sbjct: 674 DLEGHKLQIKASHKGADAAEERRREDALKKAASTKILIKNLPFEASKK 721
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 13/121 (10%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+FVR LP TED +R+HF ++ + D + I YV Y P+ A++
Sbjct: 1 MESSRIFVRGLPSNFTEDGMRKHFGRYP-------ITDVKFFPHRRIGYVGYKTPQDAAQ 53
Query: 356 AIEVLDNSIFQGRLLHVMPARH------KKSSDKQELHNSTSQGTKTLKQRREEERKASE 409
A++ D + + ++ AR KS +Q++ T + + + +R+E E K
Sbjct: 54 AVKYFDKTFIKLTRIYAEIARPIADKELPKSRRQQKMEALTPKTDEYVPKRQENELKRKR 113
Query: 410 A 410
A
Sbjct: 114 A 114
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
+ S + +KNL F+ + +R F + G++ SV+V K + S GFGF EF +
Sbjct: 703 KAASTKILIKNLPFEASKKEVRALFTPY---GQLRSVRVPKKFDSS---SRGFGFAEFTT 756
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAKKDE 703
A N L+ T L G L+L + D+
Sbjct: 757 KRDALNAMNALKNTHLLGRRLVLAFAETESDD 788
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP ++ +R F+ G++ ++ + D SR F F F T+++A A+
Sbjct: 707 TKILIKNLPFEASKKEVRALFTPYGQLRSVRVPKKFDSSSRGFGFAEFTTKRDALNAMNA 766
Query: 61 FNKSYLDTCRISCEIARKVGD 81
++L R+ A D
Sbjct: 767 LKNTHLLGRRLVLAFAETESD 787
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++ ++NLP+ A++ E+R F+ +G + V + D+ S+G + + A A+
Sbjct: 706 STKILIKNLPFEASKKEVRALFTPYGQLRSVRVPKKFDSS-SRGFGFAEFTTKRDALNAM 764
Query: 358 EVLDNSIFQGRLL 370
L N+ GR L
Sbjct: 765 NALKNTHLLGRRL 777
>gi|366988651|ref|XP_003674093.1| hypothetical protein NCAS_0A11540 [Naumovozyma castellii CBS 4309]
gi|342299956|emb|CCC67712.1| hypothetical protein NCAS_0A11540 [Naumovozyma castellii CBS 4309]
Length = 869
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 248/796 (31%), Positives = 417/796 (52%), Gaps = 107/796 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFF------SQKGE-----ITDAKLMRTKDGKSRQFAFIGFR 49
SRI VK LP ++T+D L+ F + K E ITD K++R ++G+SR+FAFIG+
Sbjct: 2 SRIIVKGLPSFLTDDNLKQHFEKRLNQTHKNEPINSLITDVKILRNREGESRKFAFIGYH 61
Query: 50 TEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWS--------RYSLKKEKEVSE 101
E++A +A+ YFN SY++T ++ +A+ DP +P+P R+ K+E+ ++E
Sbjct: 62 NEEDAFDAVNYFNGSYINTAKLEVSMAKSFADPRVPQPMKERKREALKRFREKEERLLAE 121
Query: 102 DEKNPVLAAKRGEKKTIE-KVTENDDPQLLEFLQVMQPRVKSKMW--------------- 145
+K ++ + +I+ ++++N QL EF++ M+P + W
Sbjct: 122 SDKKKQKVKEKERRLSIDAEISKNK--QLQEFIETMKPSSQVPSWEKPVSHKNAEEDNEE 179
Query: 146 ANDTLIGLMA----DQKAKVSEN--------ISQAIKGGEKSITLHVKSDKSNVITDSQA 193
+++ L+ L+ D+K + EN ++ K ++ + D + T +
Sbjct: 180 SSNPLLALLNNGDDDKKPLLKENESDDEYADFNKDQKDEQEDEPMMKLDDLNTTETTEKK 239
Query: 194 TEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDS 253
T + + A DE +SD+++FK R + +GE E + + + +
Sbjct: 240 TREDDHLAQDEKVSDLNWFKQRRVRIR-----------------EGESEAAKPSSLSKEG 282
Query: 254 NEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQE-VLESGRLFVRNLPYTATE 312
N E ++ +K++ S ++ + P + +D+ E + ++GRLF+RN+ YT TE
Sbjct: 283 NTEGNASLKENTDSENKNDEEEKKEE--QEPQQTPEDIAMEKISKTGRLFLRNILYTTTE 340
Query: 313 DELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
D+ R+ F FG + EVH+ +D T +SKG AY+L+ P+ A +A LD IFQGRLLH+
Sbjct: 341 DDFRKLFGPFGELEEVHVALDTRTGKSKGFAYILFKDPKEAVQAYIELDKQIFQGRLLHI 400
Query: 373 MPARHKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVEN 430
+PA KKS D+ +L N LK++RE ++K AS T +WNSL+M D V+ +
Sbjct: 401 LPADAKKSHRLDEFDLKNM------PLKKQRELKKK-DNASRQTFSWNSLYMNQDAVLGS 453
Query: 431 IARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGL 490
+A K G+ KSDL+D E+++ AV+ AL E +I + +K + GV+++ + + +
Sbjct: 454 VAAKLGLKKSDLIDPESSNSAVKQALAEAHIIGDVRKYFESKGVDLTKFAQTKSPE---- 509
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGL 550
+R V LVKN PY ++ E+ ++F FG L ++++P + T+A+V + + +AF L
Sbjct: 510 QRDAKVILVKNFPYGTTREEIGELFLPFGKLKRLLMPPSGTIAIVEYRDTTSGRSAFTKL 569
Query: 551 AYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDA----VVGEHDAKRALL---------E 597
A+KR+K +YLE P D ++ + + DA VV D + ++ E
Sbjct: 570 AFKRFKDGIIYLEKGPKDCFTRDAEPADLIEADAPEENVVEVKDTVKEIMDSTDKTSNEE 629
Query: 598 QQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS-VKVKKHLKN 656
+ E V D + S+F+KNLNF T L K F G +++ VK K K+
Sbjct: 630 HEDEHVADG-------PTVSIFIKNLNFTTTSVELSKRFKTF--SGFVVAQVKTKPDPKH 680
Query: 657 G-KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKA-EKDKS 714
K +SMGFGF EF + E A V L GT++DGH + L+L H + A K
Sbjct: 681 ADKTLSMGFGFAEFRTKEQANAVISALDGTVIDGHRIQLKLSHRQGSSNTTSSAKGKKIK 740
Query: 715 STKLLVRNVAFEAQRK 730
S K++V+N+ FEA RK
Sbjct: 741 SGKIIVKNLPFEATRK 756
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 304 RNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNS 363
+NLP+ AT ++ E F+ FG + V V K K ++G A+V + +P+ A A++ L
Sbjct: 747 KNLPFEATRKDVFELFNSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAENAMDQLQGV 805
Query: 364 IFQGRLL 370
GR L
Sbjct: 806 HLLGRRL 812
>gi|169616726|ref|XP_001801778.1| hypothetical protein SNOG_11538 [Phaeosphaeria nodorum SN15]
gi|111060126|gb|EAT81246.1| hypothetical protein SNOG_11538 [Phaeosphaeria nodorum SN15]
Length = 830
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 240/769 (31%), Positives = 397/769 (51%), Gaps = 94/769 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI V+ LP TED +R F+ K +TD K R+ ++G+++ ++A +A+KY
Sbjct: 8 SRIFVRGLPPRFTEDDVRKHFA-KFPVTDVKFF-----PHRRIGYVGYKSPEDAAKAVKY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNK++++ +I EIAR + D +P+ SR + EK ++++ + K+ E+
Sbjct: 62 FNKTFINLTKIYAEIARPIADKELPK--SRRQQRLEKSAPQNDEYIAPLQENALKRKREQ 119
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWAN-DTLIGLMADQKAKV----------SENISQAI 169
DP+L EFLQV Q K+ +W N DT + ++ S++ Q I
Sbjct: 120 AELEQDPKLKEFLQVYQAPSKTNIWTNGDTQPDVAVASGEEIVPAVVVPEDESDDDYQVI 179
Query: 170 KGGEKSITLHVKSDKSNVIT----DSQATEKSKNAAA--DELM----------SDMDYFK 213
K+ + ++NV + ++++ + +K+ +A DE M +D D+ +
Sbjct: 180 AKKPKTAVDNATFVEANVASKPTVEAKSVDSTKDVSAQLDEDMEGVEPSGGPVTDDDWLR 239
Query: 214 SRVKKDWSDSESEDDSAGDDDDD-DDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE 272
SR + E ++ A D + ++ + E D E + ++ H+ V
Sbjct: 240 SRTNRVLDLVEDDELPAPTDRSQVSEAPQKRQPEVIEQPDEAEAVEEQAPEADHTKV--- 296
Query: 273 DANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVV 332
PSS D +++ E+GRL++RNL + TEDELR+HF+K+G++ EVH+ +
Sbjct: 297 -----------PSS---DEVEKIRETGRLYLRNLHFEVTEDELRQHFAKYGSLEEVHVPL 342
Query: 333 DKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ 392
K + KG A++ + PE A A + D +IFQGRLLH++ A+ KK + E S
Sbjct: 343 KKSDGKGKGFAFIQFKEPEQAVVAYDDTDGTIFQGRLLHIISAKAKKDTSLNEFEIS--- 399
Query: 393 GTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAV 452
K ++++E R+ +A+ T WNSL++ D V+ IA + G+SK++LLD ++D AV
Sbjct: 400 --KLPLKKQKEIRRKQDATRATFNWNSLYLNADAVMSTIANRMGISKAELLDPTSSDAAV 457
Query: 453 RIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELA 512
+ A ET +I ETK GV++ + + + G + LVKN+P+ + EL
Sbjct: 458 KQAHAETHIIQETKSYFAQHGVDLEAFQRSAKG--------DLAILVKNVPHGVTPDELR 509
Query: 513 KMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDV--- 569
KMF + G++ K ++P T A+V F +A AF L+Y++ K LYLE AP D+
Sbjct: 510 KMFEEHGTVTKFLMPPTGMTAIVEFSNIAQAKTAFMSLSYRKMKDSILYLEKAPKDLFKE 569
Query: 570 -----LSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLN 624
+ ++STS G A + D LLE+ E P+ + +L+V+NLN
Sbjct: 570 GAVIDVPRTSTSGGPA---AKLSATD----LLEEAPE--------PEAANTATLYVRNLN 614
Query: 625 FKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQG 684
F T E L + F + + R VK K K G +SMGFGF+EF+S ETA+ R + G
Sbjct: 615 FTTTTERLTEAF-KPLSGFRSAKVKTKVDPKRGV-LSMGFGFVEFNSAETASAALRTMDG 672
Query: 685 TILDGHALILQLCHAKKD---EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
L+GH L ++ H D E+ + A K +STK++++N+ FEA +K
Sbjct: 673 HDLEGHKLQIKASHKGADAAEERRKEDAAKKAASTKIIIKNLPFEAGKK 721
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 32/158 (20%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+FVR LP TED++R+HF+KF V D + I YV Y PE A++
Sbjct: 5 MESSRIFVRGLPPRFTEDDVRKHFAKFP-------VTDVKFFPHRRIGYVGYKSPEDAAK 57
Query: 356 AIEVLDNSIFQGRLLHVMPARH------KKSSDKQELHNSTSQGTK--------TLKQRR 401
A++ + + ++ AR KS +Q L S Q + LK++R
Sbjct: 58 AVKYFNKTFINLTKIYAEIARPIADKELPKSRRQQRLEKSAPQNDEYIAPLQENALKRKR 117
Query: 402 EEER-----------KASEASGNTKAWNSLFMRPDTVV 428
E+ + +A T W + +PD V
Sbjct: 118 EQAELEQDPKLKEFLQVYQAPSKTNIWTNGDTQPDVAV 155
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
+ S + +KNL F+ +++R F + G++ SV+V K S GFGF EF +
Sbjct: 703 KAASTKIIIKNLPFEAGKKDVRALFTPY---GQLRSVRVPKKFDAS---SRGFGFAEFTT 756
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAKKDE 703
A N L+ T L G L+L + D+
Sbjct: 757 KRDAVNAMNALKNTHLLGRRLVLAFAETESDD 788
>gi|19112391|ref|NP_595599.1| RNA-binding protein Mrd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|48474243|sp|O13620.1|MRD1_SCHPO RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|2257512|dbj|BAA21408.1| hypothetical protein YPR112c [Schizosaccharomyces pombe]
gi|13810221|emb|CAC37370.1| RNA-binding protein Mrd1 (predicted) [Schizosaccharomyces pombe]
Length = 833
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 260/781 (33%), Positives = 399/781 (51%), Gaps = 98/781 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQ----KGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEE 56
SRI +KN+P+Y +++L + EITD + +TK+G SR+FAFIGF+ E++A++
Sbjct: 2 SRIIIKNIPRYYDKEKLSTYLKSLPQLDAEITDVSVAKTKEGVSRRFAFIGFKNEEDADK 61
Query: 57 AIKYFNKSYLDTCRISCEIARKVGDPNMP-RPWSRYSLKK--------EKEVSEDEKNPV 107
AI+Y NKSY++T RI A N RP+S+Y+ K EKE
Sbjct: 62 AIRYLNKSYVETSRIEVHRALDYRSANEKLRPYSKYASKNIELKLQKKEKEEELRNLEEE 121
Query: 108 LAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWAN----DTLIG---LMADQKAK 160
A K+ + K + DP+ EFL++ S+ W N DT I + AD+
Sbjct: 122 KAKKKKDANLKRKFLDTLDPKAREFLKLSSSISNSRSWENEEVFDTEITNPVIPADEDDD 181
Query: 161 VSENISQAIKGGEKSI--TLHVKSDKSNVITDS--------------QATE--KSKNAAA 202
+++ A + SI T H + S V+ D QA E +KN+
Sbjct: 182 EYQDLPAAKRHEGDSIKSTEHDSTLDSGVVIDGREKSSSELHEEESEQAAEGDTAKNSGT 241
Query: 203 DEL--MSDMDYFK---SRVKKDWSDSESEDDSAGDD----DDDDDGEEEEEEENDHNGDS 253
D +SD ++ + +R+K+ E E GD+ D +++ E E ND D+
Sbjct: 242 DAQAPLSDDEWLRLHRTRIKE--KQPEEEVSVVGDELKSFDKENNDEHLERVTNDKIADA 299
Query: 254 NEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATED 313
S+++ + + V E++ N +++ E+ RLF+RNL Y+ ED
Sbjct: 300 -----SMLQKA-ENNVSEQERNIQLIS----------------ETKRLFLRNLTYSCAED 337
Query: 314 ELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
+L+ F FG + +VH+ +DK T KG AY+ + + A RA LD FQGRLLHV+
Sbjct: 338 DLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADDAVRAYLELDAKPFQGRLLHVL 397
Query: 374 PARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIAR 433
PA+ + S L + + LK++RE +RK + AS +T +WNSL+M D VV ++A
Sbjct: 398 PAKARSSI----LLDDYALSKLPLKKQRELKRKNTAAS-STFSWNSLYMNADAVVTSLAS 452
Query: 434 KHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRS 493
+ GV K+D+LD ++D AV+ AL ET VI ETK GV++ + + + RS
Sbjct: 453 RLGVKKTDILDPTSSDSAVKQALTETHVIQETKNFFEEHGVDLDAFKNAA--------RS 504
Query: 494 NHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYK 553
++V LVKN PY +S EL +F FG L ++++P T+A++ FL + AF LAY
Sbjct: 505 DNVLLVKNFPYGTSAEELTSLFSPFGELGRILIPPAGTIAIIEFLNAPDCRQAFSKLAYT 564
Query: 554 RYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRV 613
R K LYLE AP DV + S G + V +A + E V DI + +
Sbjct: 565 RIKSSILYLEKAPRDVFTTSFKQSGKPELAQKVNAVEATTS------EKVGTEDI--ESL 616
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSV-KVKKHLKN-GKNVSMGFGFIEFDS 671
++ +++VKNLNF T E +K F EG + +V + K K GK +SMGFGF+EF
Sbjct: 617 DTATIYVKNLNFSTKQEEFQKVFKPL--EGYLSAVIRAKPDPKRPGKYLSMGFGFVEFKD 674
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAKKD--EQVVKKAEKDKSSTKLLVRNVAFEAQR 729
+A + G +LDGH L ++L H D +V K+ TK+L++N+ FEA +
Sbjct: 675 KASAVAAMHAMNGFVLDGHKLEIKLSHQGVDAAAEVRKQDSSKPKGTKILIKNLPFEATK 734
Query: 730 K 730
K
Sbjct: 735 K 735
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ ++++ G + G++ SV+V K + GF F EF + A N
Sbjct: 723 ILIKNLPFEATKKDVQSLLGAY---GQLRSVRVPKKFDRS---ARGFAFAEFVTAREAAN 776
Query: 678 VCRDLQGTILDGHALILQLC 697
R L+ T L G L+LQ
Sbjct: 777 AMRALKNTHLLGRHLVLQYA 796
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 469 LTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP- 527
L++ GV+ ++ K D K L+KNLP+++++ ++ + G +G L V +P
Sbjct: 699 LSHQGVDAAA----EVRKQDSSKPKGTKILIKNLPFEATKKDVQSLLGAYGQLRSVRVPK 754
Query: 528 ----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
S + A F+ EAA A + L G L L++A
Sbjct: 755 KFDRSARGFAFAEFVTAREAANAMRALKNTHLLGRHLVLQYA 796
>gi|358391000|gb|EHK40405.1| hypothetical protein TRIATDRAFT_153359 [Trichoderma atroviride IMI
206040]
Length = 839
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 254/775 (32%), Positives = 395/775 (50%), Gaps = 94/775 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI VK LP +TE +R FS K EITD KL+ R+ ++G++T ++A+ A+K
Sbjct: 4 SRIFVKGLPPNITEADVRKHFSAKNREITDVKLI-----PQRRIGYVGYKTPEDAQGAVK 58
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIE 119
YFNKSY+ +IS E A+ + DP + + S+ S+ + V+ + + P L + KK
Sbjct: 59 YFNKSYIRMSKISVEPAKPISDPALGK--SQRSVHSDAHVATNLR-PHLKEEGDSKKRKR 115
Query: 120 KVTENDDPQLLEFLQVMQPRVKSKMWANDT-----LIGLMADQKAKVSENIS-----QAI 169
+ + DP+L EFL+VM+ + K + A++T + GL A V E S Q
Sbjct: 116 EDLDESDPKLREFLRVMK-QGKGGVLADETNPDADMTGLATGGGALVEEGESDNEYEQIP 174
Query: 170 KGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDS 229
K EK N++ + + ++ + + + +++ D K + ++E +
Sbjct: 175 KRQEKPHKTQSSEANQNLVMNQRVPREATSDQSVQPVAEADSVKPQ------EAEEAPQT 228
Query: 230 AGDDDDDD-------------DGEEEEEEENDHNGDSNEECDSIIKDSIHSG--VGEEDA 274
+ D DDD D ++ + DS D D+ HS V EDA
Sbjct: 229 SVDATDDDWLRSRTNRLLDLVDPDDLPQPAEQRAVDSAVRDDGENNDTTHSSHEVVMEDA 288
Query: 275 NGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDK 334
+ D G S+++ D + + RLFVRNLPYTATE++L + F +FG + EVH+ +
Sbjct: 289 PDQANDQGANSTAADDAIATISRTSRLFVRNLPYTATEEDLHQKFGEFGTLQEVHLPTNA 348
Query: 335 DTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGT 394
R KG A VLY A +A + LD FQGR+LH++PA KK D+ + +
Sbjct: 349 SGVR-KGFALVLYDDSSDAVKAFQALDGVTFQGRILHIIPAEAKKLQDEFGM-------S 400
Query: 395 KTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRI 454
K +++ RK +EAS + WNSL+M D V ++A + GVSKS++LD + D V+
Sbjct: 401 KLPLKKQNLIRKKAEASTSVFNWNSLYMSQDAVNASVAARLGVSKSEVLDPTSADAGVKQ 460
Query: 455 ALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKM 514
A+ ET +I ETK + GV++ + + KR LVKN PY +S EL KM
Sbjct: 461 AIAETTIIQETKAFFASNGVDLDAFKSH--------KRGGTSILVKNFPYGTSMEELRKM 512
Query: 515 FGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
F + G + +V++P T T+A++ F + A AAF +AY+R K L+LE AP D+ S
Sbjct: 513 FEECGPVLRVLMPPTGTIAIIQFAQLNHAKAAFGKMAYRRVKDSVLFLEKAPIDLFKNGS 572
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADID-----PDRV----ESRSLFVKNLNF 625
T Q++ A + L +Q GV +D D++ E+ SLFV+NLNF
Sbjct: 573 T----QQDQA---------SPLGEQRTGVQKLSVDDLLSSGDKIEEPAETASLFVRNLNF 619
Query: 626 KTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDL 682
T L + F +G +S +VK + K G+ +SMGFGF+EF S A + +
Sbjct: 620 ATTTNKLAEAF--EPLDG-FVSARVKTKIDAKKPGQTLSMGFGFVEFRSKSQAQAALKTM 676
Query: 683 QGTILDGHALILQLCHAKKD-------EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
G +LDGH L ++ H D E V KKA + TK++++N+ F+A +K
Sbjct: 677 DGYVLDGHTLGVKASHRGHDAAEERRREDVAKKAAAQR--TKIVIKNLPFQATKK 729
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 296 LESGRLFVRNLPYTATEDELREHFS-KFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+E+ R+FV+ LP TE ++R+HFS K +++V ++ + I YV Y PE A
Sbjct: 1 METSRIFVKGLPPNITEADVRKHFSAKNREITDVKLIPQRR------IGYVGYKTPEDAQ 54
Query: 355 RAIEVLDNSIFQGRLLHVMPAR 376
A++ + S + + V PA+
Sbjct: 55 GAVKYFNKSYIRMSKISVEPAK 76
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R FAF F T +EAE A+
Sbjct: 715 TKIVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADYTARGFAFADFVTPREAENALNA 774
Query: 61 FNKSYLDTCRISCEI 75
++L R+ +
Sbjct: 775 LKDTHLLGRRLVLDF 789
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R F +G + V + D ++G A+ + P A A+
Sbjct: 716 KIVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADYT-ARGFAFADFVTPREAENALNA 774
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 775 LKDTHLLGRRL 785
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
++KNLP+ +++ ++ +FG +G L V +P + + A F+ P EA A L
Sbjct: 717 IVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADYTARGFAFADFVTPREAENALNALK 776
Query: 552 YKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEG 602
G L L++A ++ + + Q+ VG K AL QQL G
Sbjct: 777 DTHLLGRRLVLDFAAAEAVDAEEEIEKMQRK---VGGQANKMAL--QQLTG 822
>gi|315041593|ref|XP_003170173.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
gi|311345207|gb|EFR04410.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
Length = 799
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 244/759 (32%), Positives = 379/759 (49%), Gaps = 99/759 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP +T D+LR+ F+Q+ E+TDA ++ +R+ F+GF+ AE A+KY
Sbjct: 4 TRVFVSGLPPSLTSDKLRNHFAQRFEVTDAHVI-----PNRRIGFVGFKGPDLAENAVKY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNKS+++ +IS E+AR V N +RY K ++ ++ P L KR + E
Sbjct: 59 FNKSFINMSKISVEMARAVDADNSEDLRARY----RKHLNAKKETPSLKRKRDTQDPEE- 113
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLHV 180
D +L E+L MQP KS+ WA+ I + ++ + + + + + ++
Sbjct: 114 -----DEKLQEYLTAMQPPTKSRTWADSGAIPTVHQEQDPAIDATKEPTEDKD-DVEMYN 167
Query: 181 KSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGE 240
+ I+ +Q +E N A D + + D + + DW S++ DD+D+
Sbjct: 168 AENTVTGISVTQ-SETELNEAGDAVNTSEDNPEPQNDDDWLRSKTSRLLGLLDDEDEMSA 226
Query: 241 EEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSS------------- 287
E G ED + P S+
Sbjct: 227 E-----------------------TWKGKPSEDKTAQTPVPAKTYSTKAAIEEEEAVPEP 263
Query: 288 SKDVQQEVLE-SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
D E + +GRLF+RNLPY A+ED+L FS+FG + E H+ D SKG AY+
Sbjct: 264 PPDANIESIRLTGRLFIRNLPYNASEDDLSATFSRFGKIEETHVATDTRHSTSKGFAYIQ 323
Query: 347 YAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERK 406
Y ++A A + LD FQGRL+H++PA KK+ E S LK++++ +RK
Sbjct: 324 YVESDAAIEAYKQLDGKDFQGRLMHILPASSKKTYKLDEFEISKL----PLKKQQQIKRK 379
Query: 407 ASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETK 466
A EA+ +T +WNSL+M D V+ ++A + GVSKS LLD ++D AV+ A ET VI ETK
Sbjct: 380 A-EAASSTFSWNSLYMNTDAVMASVADRLGVSKSQLLDPTSSDAAVKQAHAETHVIQETK 438
Query: 467 KALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVIL 526
+ GVN+ S ++ +R N L+KN Y S ++ K+ FG L ++++
Sbjct: 439 AYFSANGVNIESFKQ--------RERGNTALLLKNFTYGVSSEDIRKLCEPFGQLTQLLM 490
Query: 527 PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVV 586
P + T+A+V F P EA AFKGLAYKR LY+E AP ++ T
Sbjct: 491 PPSGTIAIVEFAMPDEALRAFKGLAYKRLGDSILYVEKAPKNLFEGGPTV---------- 540
Query: 587 GEHDAKRALLEQQL--EGVTDADI----DPDR-VESRSLFVKNLNFKTCDENLRKHFGEH 639
+LL Q++ +G + +D +P+ +ES +LFV+NLNF T D L F
Sbjct: 541 ----TMPSLLTQKVVSQGFSTSDTFKADEPEAPMESATLFVRNLNFITTDAGLSDLF--R 594
Query: 640 IKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL 696
+G +S +VK K G+ +SMGFGF+EF S A + L G LD H L+++
Sbjct: 595 PLDG-FISAQVKTRPDPKKPGERLSMGFGFVEFKSRAQAEAALKALNGYKLDQHELVIKP 653
Query: 697 CHAKKD--EQVVKKAEKDKSS---TKLLVRNVAFEAQRK 730
H D EQ K+ K+S TK++++N+ F+A +K
Sbjct: 654 SHKGMDAAEQRRKEDNAKKASAKRTKIIIKNLPFQATKK 692
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E R+FV LP + T D+LR HF++ V++ H++ ++ I +V + P+ A
Sbjct: 1 MEGTRVFVSGLPPSLTSDKLRNHFAQRFEVTDAHVIPNRR------IGFVGFKGPDLAEN 54
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQEL------HNSTSQGTKTLKQRREEE 404
A++ + S + V AR + + ++L H + + T +LK++R+ +
Sbjct: 55 AVKYFNKSFINMSKISVEMARAVDADNSEDLRARYRKHLNAKKETPSLKRKRDTQ 109
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ + F+ G++ ++ + D +R FAF F + +EAE A+
Sbjct: 678 TKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDHTARGFAFADFVSSREAENAMDA 737
Query: 61 FNKSYLDTCRISCE-IARKVGDP 82
++L R+ E ++ + DP
Sbjct: 738 LRNTHLLGRRLVLEFVSEEATDP 760
>gi|444317805|ref|XP_004179560.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
gi|387512601|emb|CCH60041.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
Length = 868
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 254/811 (31%), Positives = 401/811 (49%), Gaps = 138/811 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFF-----------SQKGEITDAKLMRTKDGKSRQFAFIGFR 49
SR+ VK LP Y+T+D+L++ F + + ITD K+++ K+G SR+FAFIGFR
Sbjct: 2 SRVIVKGLPVYLTDDKLKEHFIKRLTHKHNNSNSQNLITDVKILKDKNGNSRRFAFIGFR 61
Query: 50 TEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWS---RYSLKKEKEVSED---E 103
E +A +A+ YFN SY+DT +++ IA+ DPN+P+P R +LK+ +E E
Sbjct: 62 NEDDAYDAVDYFNGSYIDTAKLNVSIAKSFADPNVPQPMKEKKREALKRIREREEKLIGG 121
Query: 104 KNPVLAAKRGEKKT------IEKVTENDDPQLLEFLQVMQPRVKSKMW--------ANDT 149
KN +K KK IEK + QL EF++ M+P K W +N
Sbjct: 122 KNKKQKSKHDNKKVSSIDAEIEK-----NKQLQEFIETMKPSSKVPSWEKVTSTAESNPL 176
Query: 150 LIGLMADQKAKVSEN----ISQAI-----------------------KGGEKSITLHV-- 180
L L D S +SQA+ K E+ + L
Sbjct: 177 LDELTVDNSNSESSTSNPLLSQALAMKSDNDSDDEYIDFQSKPEKNEKSNEQIMLLDSLE 236
Query: 181 KSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGE 240
KS K++ D E S A DE +SD+D+ K R + + D+D +
Sbjct: 237 KSQKNSDDGDDDDDELSNEIAKDEAVSDLDWLKQRRVRIRNGENVPVKVDLDNDTQKEIT 296
Query: 241 EEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGR 300
EE E + ++EE +++ +GR
Sbjct: 297 HSEEAEEQTSKKTDEEI---------------------------------AIEKISATGR 323
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LF+RN+ YT+TE++ ++ FS FG + EVH+ +D T +SKG AYVL+ P A +A L
Sbjct: 324 LFLRNILYTSTENDFKKLFSSFGEIDEVHVALDTRTGKSKGFAYVLFKNPADAVQAYIEL 383
Query: 361 DNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWN 418
D IFQGRLLH++PA KK+ D+ +L N LK+++E RK A+ +T +WN
Sbjct: 384 DKQIFQGRLLHILPADSKKNHRLDEFDLKNM------PLKKQKELRRK-DNATKHTFSWN 436
Query: 419 SLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSS 478
SL+M D V+ ++A G+ KS LLD E ++ AV+ AL E VI + +K + GV+++
Sbjct: 437 SLYMNQDAVLSSVASSLGLEKSQLLDPENSNSAVKQALAEAHVIGDVRKYFESKGVDLTK 496
Query: 479 LEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFL 538
+ + + + V LVKN P+ ++ EL +F FG L + ++P+ T+A++ +
Sbjct: 497 FSQMRSAND----KDDTVILVKNFPFGTTREELGDLFLPFGKLTRFLMPNVGTIAIIQYR 552
Query: 539 EPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQK---------NDAVVGEH 589
+ AAF LAYKR+K +YLE P ++ ++ +S + + + + H
Sbjct: 553 DITSGRAAFTKLAYKRFKDGIIYLEKGPKNLFTREPSSDESLESEEKSEVEAKEVKLSSH 612
Query: 590 DAKRALLEQQLEG-----VTDADIDPDRVESRSLFVKNLNFKTCDENL---RKHFGEHIK 641
D ++E++ E D D D + S+F+KNLNF T L K FG +
Sbjct: 613 D----IMEKREESSEKRTDDDGDEDIVDGPTVSIFIKNLNFTTTTSQLVERFKSFGGFV- 667
Query: 642 EGRILSVKVKKHLKNG-KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
+ VK K K+ + +SMGFGF+EF + E A V + G+++DGH + ++L H +
Sbjct: 668 ---VAQVKTKPDPKDSQRTLSMGFGFVEFRTKEQALAVIEAMDGSVIDGHKIQMKLSHRQ 724
Query: 701 -KDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ +K K S+K++V+N+ FEA RK
Sbjct: 725 GTNNNSNNAKDKKKKSSKIIVKNLPFEATRK 755
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP+ AT ++ E FS FG + V V K K ++G A+V + +P+ A A++ L
Sbjct: 743 IIVKNLPFEATRKDIFELFSSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAENAMDQL 801
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
GR L + A + ++E+ T + K R
Sbjct: 802 QGVHLLGRRLVMQYAEQDAVNAEEEIERMTKKVRKQAATR 841
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
+VKNLP++++ ++ ++F FG L V +P S + A V FL P EA A L
Sbjct: 744 IVKNLPFEATRKDIFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLQG 803
Query: 553 KRYKGVPLYLEWAPSDVLS 571
G L +++A D ++
Sbjct: 804 VHLLGRRLVMQYAEQDAVN 822
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I VKNLP T + + FS G++ ++ + D +R FAF+ F +EAE A+
Sbjct: 743 IIVKNLPFEATRKDIFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLQ 802
Query: 63 KSYLDTCRISCEIA 76
+L R+ + A
Sbjct: 803 GVHLLGRRLVMQYA 816
>gi|327298413|ref|XP_003233900.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
gi|326464078|gb|EGD89531.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
Length = 798
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 243/747 (32%), Positives = 378/747 (50%), Gaps = 76/747 (10%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP +T D+LR F+Q+ E+TDA ++ +R+ F+GF+ AE A+KY
Sbjct: 4 TRVFVSGLPPSLTSDKLRHHFAQRFEVTDAHVI-----PNRRIGFVGFKGPDLAEIAVKY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNK++++ +IS E+AR V N +RY K ++ + P L KR + T E
Sbjct: 59 FNKTFINMSKISVEMARPVDANNSDDLRARY----RKHLNAKKDPPSLKRKRDTQDTEE- 113
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLHV 180
D +L E+L MQP KS+ WA+ + A Q+ K + + + E + +H
Sbjct: 114 -----DEKLQEYLTAMQPPTKSRTWADSGAVP-TAHQEQKAAIDAVKEPTEDEDDVEMH- 166
Query: 181 KSDKSNVITDSQATEKS-KNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDG 239
+ +TD+ TE K+ D + + + + DW S++ DD+D+
Sbjct: 167 --NVETAVTDNPVTEPEIKSDDVDAVNPNEENPVQQNDDDWLRSKTSRLLGLLDDEDEMA 224
Query: 240 EEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLE-S 298
E + + N +D I + + D E + +
Sbjct: 225 AETWKGKPLENA----------RDQPPVPAKTSSTKAAIEEEESVPEPPPDANIESIRLT 274
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
GRLF+RNLPY A+ED+L FS+FG + E H+ D SKG AY+ Y ++A A +
Sbjct: 275 GRLFIRNLPYNASEDDLNATFSRFGKIEETHVATDTRHSTSKGFAYIQYVESDAAIEAYK 334
Query: 359 VLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWN 418
LD FQGRL+H++PA KK+ E S LK++++ +RKA EA+ +T +WN
Sbjct: 335 QLDGKDFQGRLMHILPASSKKTYKLDEFEISKL----PLKKQQQIKRKA-EAASSTFSWN 389
Query: 419 SLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSS 478
SL+M D V+ ++A + GVSKS LLD ++D AV+ A ET VI ETK + GVN+ S
Sbjct: 390 SLYMNTDAVMASVADRLGVSKSQLLDPTSSDAAVKQAHAETHVIQETKAYFSANGVNIES 449
Query: 479 LEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFL 538
++ +R N L+KN Y S ++ K+ FG L ++++P + T+A+V F
Sbjct: 450 FKQ--------RERGNTALLLKNFTYGVSSEDIRKLCEPFGQLTRLLMPPSGTIAIVEFA 501
Query: 539 EPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQ 598
P E AFKGLAYKR LY+E AP ++ G +LL Q
Sbjct: 502 MPDETLRAFKGLAYKRIGDSILYVEKAPKNLFEG--------------GPPVTMPSLLNQ 547
Query: 599 QL--EGVTDADI----DPD-RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVK 651
++ +G + +D +P+ +ES +LFV+NLNF T D L F +G +S +VK
Sbjct: 548 KVVSQGFSTSDTFKADEPEAPMESATLFVRNLNFVTTDAGLSDLF--RPLDG-FISAQVK 604
Query: 652 KHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD--EQVV 706
K G+ +SMGFGF+EF S A + L G LD H L+++ H D EQ
Sbjct: 605 TRPDPKKPGERLSMGFGFVEFKSRAQAEAALKALNGYKLDQHELVIKPSHKGMDASEQRR 664
Query: 707 KKAEKDKSS---TKLLVRNVAFEAQRK 730
++ K+S TK++++N+ F+A +K
Sbjct: 665 REDNAKKASAKRTKIIIKNLPFQATKK 691
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ + F+ G++ ++ + D +R FAF F + +EAE A+
Sbjct: 677 TKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTARGFAFADFVSSREAENAMDA 736
Query: 61 FNKSYLDTCRISCE-IARKVGDP 82
++L R+ E ++ + DP
Sbjct: 737 LRNTHLLGRRLVLEFVSEEATDP 759
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E R+FV LP + T D+LR HF++ V++ H++ ++ I +V + P+ A
Sbjct: 1 MEGTRVFVSGLPPSLTSDKLRHHFAQRFEVTDAHVIPNRR------IGFVGFKGPDLAEI 54
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQEL------HNSTSQGTKTLKQRREEE 404
A++ + + + V AR +++ +L H + + +LK++R+ +
Sbjct: 55 AVKYFNKTFINMSKISVEMARPVDANNSDDLRARYRKHLNAKKDPPSLKRKRDTQ 109
>gi|451846216|gb|EMD59526.1| hypothetical protein COCSADRAFT_100727 [Cochliobolus sativus
ND90Pr]
Length = 828
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 239/764 (31%), Positives = 380/764 (49%), Gaps = 82/764 (10%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI V+ LP TED +R F+ K ITD K R+ ++G++T ++A +A+KY
Sbjct: 4 SRIFVRGLPPKFTEDDVRKHFA-KYPITDVKFF-----PHRRIGYVGYKTPEDAAKAVKY 57
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNK+++ +I EIAR P +P+ + L+K ++++ K P+ R E + K
Sbjct: 58 FNKTFIKLTKIYVEIAR----PELPKSRRQQKLEKSASINDEYKPPL----RQENELKRK 109
Query: 121 VTEND-DPQLLEFLQVMQPRVKSKMWAN------------DTLIGLMA------------ 155
E + DP+L EFL+V QP K+K+WAN DT++ +A
Sbjct: 110 RDEAEQDPKLKEFLEVYQPPSKTKIWANGESHVDEANAAEDTVVPEIAVPEEESDDEYQV 169
Query: 156 -DQKAKVSENISQAIKGGEKSITLHVKSDKSNVITDS-QATEKSKNAAADEL--MSDMDY 211
+K KV+ + + S T D + D+ +A E + E +SDMD+
Sbjct: 170 ISKKPKVAAETTATPAPAQPSSTEESTKDPVDAAVDTGEAMEDVQEVPTAEPGPVSDMDW 229
Query: 212 FKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGE 271
+SR + E ++E N +++ +
Sbjct: 230 LRSRTNRVLELVE------------------DDEVPVSNVPASQAPAPQPPRAAEDSAEP 271
Query: 272 EDANGEIVDPG--NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVH 329
+A E P P +++ D + ++ E+GRL++RNL Y TEDE+RE FSK G + EVH
Sbjct: 272 VEAQPEPPQPMAEQPETAAPDEEDKIRETGRLYLRNLHYEVTEDEIREQFSKHGALEEVH 331
Query: 330 IVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNS 389
+ + K + KG A+V + P A A DN+IFQGRLLH++ A+ KK + E S
Sbjct: 332 VPLKKADSKGKGFAFVQFQNPNDAVEAYLDNDNTIFQGRLLHIISAKAKKDTKLDEYEIS 391
Query: 390 TSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND 449
LK+++E RK S A WNSL+M D V+ +A G+SK++LLD ++D
Sbjct: 392 KL----PLKKQKEIRRKQSAAKA-VFNWNSLYMNADAVMSTVADCMGISKAELLDPTSSD 446
Query: 450 LAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEG 509
AV+ A ET +I ETK GV++ + + + G + LVKN+P+ +
Sbjct: 447 AAVKQAHAETHIIQETKSYFAQHGVDLEAFQRSAKG--------DLAILVKNIPHGVTAD 498
Query: 510 ELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDV 569
EL K+F + G+++K ++P T A+V F +A +AF L+Y++ K LYLE AP D+
Sbjct: 499 ELRKLFEEHGTVNKFLMPPTGMTAIVEFANVAQAKSAFMSLSYRKMKDSILYLEKAPKDL 558
Query: 570 LSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCD 629
+ + Q + + + + D +P+ + +L+V+NLNF T
Sbjct: 559 FKEGVATNFVQTTPSASVPTSTQPGTKLSATDLLVDIP-EPEATNTATLYVRNLNFSTST 617
Query: 630 ENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDG 689
E L + F + + R VK K K G +SMGFGF+EF+S ETAT R + G L+G
Sbjct: 618 ERLIEAF-KPLSGFRSAKVKTKVDPKRGV-LSMGFGFVEFNSPETATAALRAMDGYDLEG 675
Query: 690 HALILQLCHAKKD---EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
H L ++ H D E+ + A +STK++++N+ FEA +K
Sbjct: 676 HKLQIKASHRGADAAEERRNEDAANKAASTKIIIKNLPFEASKK 719
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+FVR LP TED++R+HF+K+ + D + I YV Y PE A++
Sbjct: 1 MESSRIFVRGLPPKFTEDDVRKHFAKYP-------ITDVKFFPHRRIGYVGYKTPEDAAK 53
Query: 356 AIEVLDNSIFQGRLLHVMPARHK--KSSDKQELHNSTS---QGTKTLKQRREEERKASEA 410
A++ + + + ++V AR + KS +Q+L S S + L+Q E +RK EA
Sbjct: 54 AVKYFNKTFIKLTKIYVEIARPELPKSRRQQKLEKSASINDEYKPPLRQENELKRKRDEA 113
Query: 411 SGNTK 415
+ K
Sbjct: 114 EQDPK 118
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 611 DRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFD 670
++ S + +KNL F+ + +R F + G++ SV+V K S GFGF EF
Sbjct: 700 NKAASTKIIIKNLPFEASKKEVRALFAPY---GQLRSVRVPKKFDAS---SRGFGFAEFT 753
Query: 671 SVETATNVCRDLQGTILDGHALILQLCHAKKDE 703
+ A N L+ T L G L+L A+ D+
Sbjct: 754 TKRDAVNAMNALKNTHLLGRRLVLAFAEAESDD 786
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP ++ +R F+ G++ ++ + D SR F F F T+++A A+
Sbjct: 705 TKIIIKNLPFEASKKEVRALFAPYGQLRSVRVPKKFDASSRGFGFAEFTTKRDAVNAMNA 764
Query: 61 FNKSYLDTCRISCEIARKVGD 81
++L R+ A D
Sbjct: 765 LKNTHLLGRRLVLAFAEAESD 785
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++ ++NLP+ A++ E+R F+ +G + V + D S+G + + A A+
Sbjct: 704 STKIIIKNLPFEASKKEVRALFAPYGQLRSVRVPKKFDAS-SRGFGFAEFTTKRDAVNAM 762
Query: 358 EVLDNSIFQGRLL 370
L N+ GR L
Sbjct: 763 NALKNTHLLGRRL 775
>gi|242802831|ref|XP_002484053.1| pre-rRNA processing protein Mrd1, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717398|gb|EED16819.1| pre-rRNA processing protein Mrd1, putative [Talaromyces stipitatus
ATCC 10500]
Length = 812
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 248/774 (32%), Positives = 377/774 (48%), Gaps = 119/774 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V +P ++ + L FS + +TD+ ++ +R+ F+GF+ + A+EA KY
Sbjct: 4 TRVFVSGIPPTLSNEDLGKHFSSRFHVTDSHVI-----PNRRIGFVGFKNAEIAKEAAKY 58
Query: 61 FNKSYLDTCRISCEIARKVGD--PNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTI 118
FNK++L +IS EIAR G+ P R S + + + + N L KR E
Sbjct: 59 FNKTFLRMSKISVEIARPAGESKPTKNRTHS------DHDSTSNASN--LKRKRDE---- 106
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITL 178
T DDP+L EFL VMQ K++ WAND +I I E +I
Sbjct: 107 ---TSKDDPKLQEFLNVMQHSSKTRTWANDDIISAAP-----------TIIDSSEPAI-- 150
Query: 179 HVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDD 238
VK++ ++ S+ +KSK M +++ + K + D A DD+ D
Sbjct: 151 -VKTNDASQDKPSRPVKKSK-------MDEVETPRPASKTPAVPAAQGGDEAQHQDDNAD 202
Query: 239 GEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQ----- 293
E EE+ + + D + + ++ P P+S+S V+
Sbjct: 203 KEASAEEDQPKS-----DMDWLRSKTSRLLGLLDEEEETASGPQPPASASSTVEPIEEDS 257
Query: 294 ----------------------EVLE-SGRLFVRNLPYTATEDELREHFSKFGNVSEVHI 330
E++ SGRLF+RNL Y ATE +L F+ FG + E+H+
Sbjct: 258 DEVEEAPVAEEPAEEKDYNADIELIRISGRLFLRNLAYDATEADLETLFAPFGKIDEIHV 317
Query: 331 VVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHN 388
D T SKG AY+ Y P SA A + LD FQGRLLH++PA KKS D+ EL
Sbjct: 318 AFDTRTTSSKGFAYIQYVDPSSAIDAYKNLDGKDFQGRLLHILPASAKKSYKIDEYELSK 377
Query: 389 STSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN 448
LK++R+ +R+ EAS +T WNSL+M D V+ +IA + GVSKSDLLD ++
Sbjct: 378 ------LPLKKQRQVKRRM-EASSSTFNWNSLYMNSDAVMSSIADRLGVSKSDLLDPTSS 430
Query: 449 DLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSE 508
D AV+ A ET VI ETK T GVN+ S ++ G T LVKN Y
Sbjct: 431 DAAVKQAHAETHVIQETKAYFTANGVNIDSFKQRERGTT--------TILVKNFSYGVKV 482
Query: 509 GELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSD 568
+L K+F FG L ++++P + T+A+V F +P EA+ AFKGLAY++ L+LE AP D
Sbjct: 483 ADLRKLFEPFGQLTRLLMPPSGTIAIVEFAKPDEASKAFKGLAYRKLGDSILFLERAPKD 542
Query: 569 VLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADI-----DPDRVESRSLFVKNL 623
+ T G+ V G + + +G + AD + ++ + +LFV+NL
Sbjct: 543 LFESPPT--GSALISGVEGP--------QAKDQGFSAADTFAAEDNEPQLPTSTLFVRNL 592
Query: 624 NFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCR 680
NF T L + F +G L+ KVK + G+ +SMGFGF+EF + E A
Sbjct: 593 NFSTTSARLTEVFSSL--DG-FLTAKVKTKTDPKRPGETLSMGFGFVEFRTKEQAQAALA 649
Query: 681 DLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSS-----TKLLVRNVAFEAQR 729
+ G LD H L+++ H D ++ E + TK++++N+ F+A +
Sbjct: 650 VMDGYTLDQHKLVVKTSHRGMDAAETRRQEDNAKKVAARRTKIIIKNLPFQATK 703
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ ++R FG + G++ SV+V K + GF F +F S A N
Sbjct: 692 IIIKNLPFQATKHDVRSLFGAY---GQLRSVRVPKKFDRS---ARGFAFADFVSSREAEN 745
Query: 678 VCRDLQGTILDGHALILQLCHAKK--DEQVVKKAEK 711
L+ T L G L+L+ A+ E+ ++K EK
Sbjct: 746 AMDALKNTHLLGRKLVLEYASAEAIDAEEEIRKIEK 781
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R FAF F + +EAE A+
Sbjct: 690 TKIIIKNLPFQATKHDVRSLFGAYGQLRSVRVPKKFDRSARGFAFADFVSSREAENAMDA 749
Query: 61 FNKSYLDTCRISCEIA 76
++L ++ E A
Sbjct: 750 LKNTHLLGRKLVLEYA 765
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R F +G + V V K + ++G A+ + A A++
Sbjct: 691 KIIIKNLPFQATKHDVRSLFGAYGQLRSVR-VPKKFDRSARGFAFADFVSSREAENAMDA 749
Query: 360 LDNSIFQGRLL 370
L N+ GR L
Sbjct: 750 LKNTHLLGRKL 760
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 20/120 (16%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E+ R+FV +P T + ++L +HFS +V++ H++ ++ I +V + E A
Sbjct: 1 MENTRVFVSGIPPTLSNEDLGKHFSSRFHVTDSHVIPNRR------IGFVGFKNAEIAKE 54
Query: 356 AIEVLDNSIFQGRLLHV---------MPARHKKSSDKQELHNSTSQGTKTLKQRREEERK 406
A + + + + + V P +++ SD H+STS + LK++R+E K
Sbjct: 55 AAKYFNKTFLRMSKISVEIARPAGESKPTKNRTHSD----HDSTSNAS-NLKRKRDETSK 109
>gi|322695955|gb|EFY87755.1| putative MRD1 [Metarhizium acridum CQMa 102]
gi|326633449|gb|ADZ99447.1| pre-rRNA processing protein [Metarhizium anisopliae]
gi|326633451|gb|ADZ99448.1| pre-rRNA processing protein [Metarhizium anisopliae]
Length = 841
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 254/788 (32%), Positives = 392/788 (49%), Gaps = 118/788 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI +K LP +TE R FS EITD KL+ R+ ++G+++ +A A+K
Sbjct: 4 SRIFIKGLPPNITEAEFRKHFSAGNREITDVKLI-----PQRRIGYVGYKSADDAAGAVK 58
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKR--GEKKT 117
YFN+SY+ +IS E AR + DP PR +S D P A+ KK
Sbjct: 59 YFNRSYIRMSKISVETARPISDP-APRKGHNWSCNLG--APGDHTTPRSASDHDVNTKKR 115
Query: 118 IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQ-----KAKVSENIS-----Q 167
+ E DP+L EFLQVM + + A+D+ + AD + V E S Q
Sbjct: 116 KREEQETADPKLREFLQVMSSGREGAV-ADDSTAAVEADHAFNHGEVAVPEGESDDEYEQ 174
Query: 168 AIKGGEKSITLHVKSDKSNVIT--------------------------DSQATEKSKNAA 201
EKS + + DKS+ +T DS+ T++ +A
Sbjct: 175 IPSRREKSRRIEPRQDKSDNVTRQPPPRDKKTSKDDIEEAGENKAEAIDSEMTDQGPSAT 234
Query: 202 ADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSII 261
++D D+ +SR + + +D +G DG E++ END S+ D +
Sbjct: 235 G---VTDDDWLRSRTNRLLDLVDPDDLGSGAVLSPVDGTTEQDMENDRL--SSHSSDEVT 289
Query: 262 KDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSK 321
D+ ++ ++++D + + RLFVRNLPY+ATED++ E F K
Sbjct: 290 PDTTADVTTSKE------------TATEDAVSAIARTSRLFVRNLPYSATEDDIWETFDK 337
Query: 322 FGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS 381
FG + EVH+ + ++ +KG A VL+ A RA + LD FQGR+LH++PA K+
Sbjct: 338 FGTLQEVHLPLTA-SRATKGFAMVLFTDSSDAVRAFQALDGVTFQGRILHIIPADAKREQ 396
Query: 382 DKQELHNSTSQGTKTLKQRREEE-RKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKS 440
E G L +++ RK +EA+ ++ WNSL+M D V +IA + GVSKS
Sbjct: 397 GLDEF------GVSKLPLKKQNMIRKKAEAASSSFNWNSLYMSQDAVNASIASRLGVSKS 450
Query: 441 DLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVK 500
+LLD + D A++ A+ ET VI ETK GV++ + + +R + LVK
Sbjct: 451 ELLDPTSADAAIKQAIAETTVIQETKAYFAANGVDLDAFKS--------QRRGDTTILVK 502
Query: 501 NLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPL 560
N P+ ++ EL KMF + G + +V++P T T+A+V F + A AAF LAY+R K L
Sbjct: 503 NFPFGTTMEELRKMFEEHGQVLRVLMPPTGTIAIVQFAQANHAKAAFGKLAYRRIKDSVL 562
Query: 561 YLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGV---TDADI-----DPDR 612
+LE AP D+L +G+ + E ++ A +QQ GV T +D+ +
Sbjct: 563 FLEKAPKDLL------RGD------IFEQTSRAA--DQQATGVQKFTVSDLLSSGDKAEE 608
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEF 669
VE+ SLF++NLNF T L + F E + +G +S +VK + K G+ +SMGFGF EF
Sbjct: 609 VETTSLFIRNLNFATTTSRLAEAF-ESL-DG-FVSARVKTKMDPKKPGQTLSMGFGFAEF 665
Query: 670 DSVETATNVCRDLQGTILDGHALILQLCHAKKD-------EQVVKKAEKDKSSTKLLVRN 722
S A + + G +LDGH L ++ H +D E KKA + TK++++N
Sbjct: 666 RSKTQAQAALKAMDGHVLDGHTLGVKASHKGQDAAEERRREDRAKKAAAQR--TKIVIKN 723
Query: 723 VAFEAQRK 730
+ F+A +K
Sbjct: 724 LPFQATKK 731
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R FAF F T +EAE A+
Sbjct: 717 TKIVIKNLPFQATKKDVRSLFGTYGQLRSVRVPKKADFTARGFAFADFVTAREAENALNA 776
Query: 61 FNKSYL 66
++L
Sbjct: 777 LKDTHL 782
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGN--VSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
+ S R+F++ LP TE E R+HFS GN +++V ++ + I YV Y + A
Sbjct: 1 MSSSRIFIKGLPPNITEAEFRKHFSA-GNREITDVKLIPQRR------IGYVGYKSADDA 53
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHN 388
+ A++ + S + + V AR ++ HN
Sbjct: 54 AGAVKYFNRSYIRMSKISVETARPISDPAPRKGHN 88
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V K + GF F +F + A N
Sbjct: 719 IVIKNLPFQATKKDVRSLFGTY---GQLRSVRVPK---KADFTARGFAFADFVTAREAEN 772
Query: 678 VCRDLQGTILDGHALILQL 696
L+ T L G L+L
Sbjct: 773 ALNALKDTHLLGRRLVLDF 791
>gi|325185984|emb|CCA20488.1| RNAbinding protein putative [Albugo laibachii Nc14]
Length = 754
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 236/744 (31%), Positives = 376/744 (50%), Gaps = 114/744 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIK 59
+R+ V+NLP YV RLR F +GE+TDA ++ TK D KSR+F F+G++T +A A
Sbjct: 8 TRLYVRNLPTYVDNARLRAHFESQGEVTDAAVVLTKADKKSRRFGFVGYKTSDQARRACA 67
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMP--RPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKT 117
YF+++Y D+C+++ A + ++ RPWS+YS S + L +K+
Sbjct: 68 YFHQTYFDSCKLNVSFAVPKAEESVCGIRPWSKYS-------SGSSQFAALHNTNEKKRK 120
Query: 118 IEK---VTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEK 174
+ K N EF + M+ R K++ WAND + +QK++ IK E
Sbjct: 121 LVKGQVAGTNSTNDFEEFAETMKARSKARFWANDDVQNFDTNQKSE-----EDRIKAAET 175
Query: 175 SITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDD 234
S +S +E + + +SDM+Y +S+ K
Sbjct: 176 S--------------NSDTSEDTMHP-----LSDMEYLRSKAAK---------------C 201
Query: 235 DDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQE 294
D+ +E +D + + E ++ D I + + A
Sbjct: 202 DNKAPTLRVKEASDKSISTTSEPEATQVDGITAQNKADYA-------------------- 241
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
RLFVRNLP++A E++LR F FG V+EVHI +D +TKR KG +V + A
Sbjct: 242 ---CNRLFVRNLPFSAVEEDLRTIFEAFGKVAEVHIPLD-ETKRRKGFGFVSFDTVSDAQ 297
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQEL-HNSTSQGTKTLKQRREEERKASEASGN 413
+A++ +D FQGR+L+V A K L N + + KTL E++ A++ G
Sbjct: 298 KALQNVDGIAFQGRVLYVTFAEAKPEITADPLDKNLSYREKKTL----EKQANANQPIG- 352
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAG 473
WN+ +R D V +A + G+++SD+L +E ++AVR+AL ET ++ E K +N G
Sbjct: 353 ---WNASHIRSDAAVGTLANRMGIARSDVLSQEHGNMAVRLALCETMLVKENKDFFSNHG 409
Query: 474 VNVSSLE------EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP 527
V++S+++ S K+D + RS V L+KNLP+ + E EL + FG FG + K +L
Sbjct: 410 VDLSAIQGALLSDSKSNAKSD-IMRSTTVILIKNLPHTTEEDELCQKFGTFGQILKFLLA 468
Query: 528 STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVG 587
++T+AL+ F+E EA AF+ LAY++Y+ VPLYLEWAP V + + K V
Sbjct: 469 PSRTVALIEFVEASEARKAFRSLAYRKYQHVPLYLEWAPLHVFTTKTVDIQTSKPGVV-- 526
Query: 588 EHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS 647
K L+++Q+ ++ +L +KNL+F T + L +F K G++
Sbjct: 527 ----KADLIDEQIGEAPCMEL------RNTLCLKNLSFTTRESTLETYFS---KFGKLRK 573
Query: 648 VKVKKHL-KNGKNVSMGFGFIEFDSVETATNV--CRDLQGTILDGHALILQLCHAKKDEQ 704
V + K K G +SMGFGF+EF A + I+DGH+L + L K +
Sbjct: 574 VTIAKSRDKRGGILSMGFGFVEFADENDAQRALSASEQSSPIIDGHSLRVTLSQKKVER- 632
Query: 705 VVKKAEKD-KSSTKLLVRNVAFEA 727
K ++KD KS++K+++RNVAFEA
Sbjct: 633 --KTSDKDGKSTSKIIIRNVAFEA 654
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 126/314 (40%), Gaps = 44/314 (14%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E+ RL+VRNLP LR HF G V++ +V+ K K+S+ +V Y + A R
Sbjct: 5 VETTRLYVRNLPTYVDNARLRAHFESQGEVTDAAVVLTKADKKSRRFGFVGYKTSDQARR 64
Query: 356 AIEVLDNSIFQGRLLHVMPARHKK----------------SSDKQELHNSTSQGTKTLKQ 399
A + F L+V A K SS LHN+ + K +K
Sbjct: 65 ACAYFHQTYFDSCKLNVSFAVPKAEESVCGIRPWSKYSSGSSQFAALHNTNEKKRKLVKG 124
Query: 400 R---------REEERKASEASGNTKAW-NSLFMRPDT---VVENIARKHGVSKSDLLDRE 446
+ EE + +A + W N DT E+ + S SD +
Sbjct: 125 QVAGTNSTNDFEEFAETMKARSKARFWANDDVQNFDTNQKSEEDRIKAAETSNSDTSEDT 184
Query: 447 ANDLA----VRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHV------ 496
+ L+ +R + A T + + ++S+ E A + DG+ N
Sbjct: 185 MHPLSDMEYLRSKAAKCDNKAPTLRVKEASDKSISTTSEPEATQVDGITAQNKADYACNR 244
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-----LALVVFLEPVEAAAAFKGLA 551
V+NLP+ + E +L +F FG + +V +P +T V F +A A + +
Sbjct: 245 LFVRNLPFSAVEEDLRTIFEAFGKVAEVHIPLDETKRRKGFGFVSFDTVSDAQKALQNVD 304
Query: 552 YKRYKGVPLYLEWA 565
++G LY+ +A
Sbjct: 305 GIAFQGRVLYVTFA 318
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 133/336 (39%), Gaps = 43/336 (12%)
Query: 285 SSSSKDVQQEVLESGR-LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
S S + + +++ S + ++NLP+T EDEL + F FG + + + S+ +A
Sbjct: 421 SDSKSNAKSDIMRSTTVILIKNLPHTTEEDELCQKFGTFGQILKFLLAP------SRTVA 474
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPA-RHKKSSDKQELHNSTSQGTKT-LKQRR 401
+ + A +A L +Q L++ A H ++ ++ S K L +
Sbjct: 475 LIEFVEASEARKAFRSLAYRKYQHVPLYLEWAPLHVFTTKTVDIQTSKPGVVKADLIDEQ 534
Query: 402 EEERKASEASGNTKAWNSLFMRPDTVVENIARKHG----VSKSDLLDREANDLAVRIALG 457
E E N F ++ +E K G V+ + D+ L++
Sbjct: 535 IGEAPCMELRNTLCLKNLSFTTRESTLETYFSKFGKLRKVTIAKSRDKRGGILSMGFGFV 594
Query: 458 ETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKR-----------SNHVFLVKNLPYDS 506
E + ++AL+ + + ++ S T K+ S +++N+ +++
Sbjct: 595 EFADENDAQRALSASEQSSPIIDGHSLRVTLSQKKVERKTSDKDGKSTSKIIIRNVAFEA 654
Query: 507 SEGELAKMFGKFGSLDKVILPST-----KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLY 561
+ ++ + G FG L +V +P + A V F+ EA AF L G L
Sbjct: 655 TVHDIRSLCGAFGQLKRVRMPKKFDGRHRGFAFVEFMTEQEAKDAFNSLCKSHLYGRHLV 714
Query: 562 LEW--------------APSDVLSQSSTSKGNQKND 583
LEW A D+LS S++ K Q+ D
Sbjct: 715 LEWAEEEENSVESLRVKAKRDLLSLSTSQKSVQEED 750
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S+I ++N+ T +R G++ ++ + DG+ R FAF+ F TEQEA++A
Sbjct: 643 SKIIIRNVAFEATVHDIRSLCGAFGQLKRVRMPKKFDGRHRGFAFVEFMTEQEAKDAFNS 702
Query: 61 FNKSYL 66
KS+L
Sbjct: 703 LCKSHL 708
>gi|326474597|gb|EGD98606.1| pre-rRNA processing protein Mrd1 [Trichophyton tonsurans CBS
112818]
Length = 798
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 246/763 (32%), Positives = 378/763 (49%), Gaps = 108/763 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP +T D+LR F+Q+ E+TDA ++ +R+ F+GF+ AE A+KY
Sbjct: 4 TRVFVSGLPPSLTSDKLRHHFAQRFEVTDAHVI-----PNRRIGFVGFKGPDLAENAVKY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNK++++ +IS E+AR V N +RY K ++ + P L KR + T E
Sbjct: 59 FNKTFINMSKISVEMARPVDADNSDDLRARY----RKHLNAKKDPPSLKRKRDTQDTEE- 113
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLHV 180
D +L E+L MQP KS+ WA+ I ++ S AI E+
Sbjct: 114 -----DEKLQEYLTAMQPPTKSRTWADSGAIPTAHQEQ-------SPAIDAAEEPTEDKD 161
Query: 181 KSDKSNV---ITDSQATE-KSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDD 236
++ NV + D T+ ++K+ D ++ + + DW S++ DD+D
Sbjct: 162 DTEMHNVETAVIDIPVTQPETKSDDVDAANANEENLVQQNDDDWLRSKTSRLLGLLDDED 221
Query: 237 DDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSS--------- 287
+ E G EDA + P SS+
Sbjct: 222 EMAAE-----------------------TWKGKPSEDARDQPPVPAKTSSTKAAAEEEES 258
Query: 288 ----SKDVQQEVLE-SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
D E + +GRLF+RNLPY A+ED+L FS+FG + E H+ D SKG
Sbjct: 259 VPEPPPDANIESIRLTGRLFIRNLPYNASEDDLNAAFSRFGKIEETHVATDTRHSTSKGF 318
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRRE 402
AY+ Y ++A A + LD FQGRL+H++PA KK+ E S LK++++
Sbjct: 319 AYIQYVESDAAIEAYKQLDGKDFQGRLMHILPASSKKTYKLDEFEISKL----PLKKQQQ 374
Query: 403 EERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI 462
+RKA EA+ +T +WNSL+M D V+ ++A + GVSKS LLD ++D AV+ A ET VI
Sbjct: 375 IKRKA-EAASSTFSWNSLYMNTDAVMASVADRLGVSKSQLLDPTSSDAAVKQAHAETHVI 433
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
ETK + GV++ S ++ +R N L+KN Y S ++ K+ FG L
Sbjct: 434 QETKAYFSANGVHIESFKQ--------RERGNTALLLKNFTYGVSSEDIRKLCEPFGQLT 485
Query: 523 KVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN 582
++++P + T+A+V F P EA AFKGLAYKR LY+E AP ++
Sbjct: 486 RLLMPPSGTIAIVEFAMPDEALRAFKGLAYKRIGDSILYVEKAPKNLFEG---------- 535
Query: 583 DAVVGEHDAKRALLEQQL--EGVTDADI----DPDR-VESRSLFVKNLNFKTCDENLRKH 635
G +LL Q++ +G + +D +P+ +ES +LFV+NLNF T D L
Sbjct: 536 ----GPPVTMPSLLNQKVVSQGFSTSDTFKADEPEAPMESATLFVRNLNFTTTDAGLSDL 591
Query: 636 FGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHAL 692
F +G +S +VK K G+ +SMGFGF+EF A + L G LD H L
Sbjct: 592 F--RPLDG-FISAQVKTRPDPKKPGERLSMGFGFVEFKGRAQAEAALKALNGYKLDQHEL 648
Query: 693 ILQLCHAKKD--EQVVKKAEKDKSS---TKLLVRNVAFEAQRK 730
+++ H D EQ ++ K+S TK++++N+ F+A +K
Sbjct: 649 VIKPSHKGMDAAEQRRREDNTKKASAKRTKIIIKNLPFQATKK 691
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E R+FV LP + T D+LR HF++ V++ H++ + + I +V + P+ A
Sbjct: 1 MEGTRVFVSGLPPSLTSDKLRHHFAQRFEVTDAHVIPN------RRIGFVGFKGPDLAEN 54
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQEL------HNSTSQGTKTLKQRREEE 404
A++ + + + V AR + + +L H + + +LK++R+ +
Sbjct: 55 AVKYFNKTFINMSKISVEMARPVDADNSDDLRARYRKHLNAKKDPPSLKRKRDTQ 109
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ + F+ G++ ++ + D +R FAF F + +EAE A+
Sbjct: 677 TKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTARGFAFADFVSSREAENAMDA 736
Query: 61 FNKSYLDTCRISCE-IARKVGDP 82
++L R+ E ++ + DP
Sbjct: 737 LRNTHLLGRRLVLEFVSEEATDP 759
>gi|426193530|gb|EKV43463.1| hypothetical protein AGABI2DRAFT_227175 [Agaricus bisporus var.
bisporus H97]
Length = 755
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 242/743 (32%), Positives = 373/743 (50%), Gaps = 111/743 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG----EITDAKLMRTKDGKSRQFAFIGFRTEQEAEE 56
SR+ +KNLP YVT RLR F Q+G +TD K+ DG SR+F F+G++T++EA
Sbjct: 2 SRLMIKNLPSYVTPVRLRQHFEQQGCPAGILTDVKVAYKSDGTSRRFGFVGYKTDEEAFA 61
Query: 57 AIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKK 116
A +F+K+++D+ RI + D PRP R L S E NP+ + K
Sbjct: 62 ARNWFDKTFIDSTRIHVTLIDGSKDAPAPRPNKRPRLGP----SPIETNPLPIRESKSDK 117
Query: 117 TIEKVTENDDPQLLEFLQVMQPRVK-SKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
++ V E Q EFL+VM+PR K +WAN E + I+ E+
Sbjct: 118 SM--VKEKLPSQAEEFLEVMKPRTKKGPIWAN---------------EAQPKDIRPQEQL 160
Query: 176 ITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDD 235
+ DK+ V T + +SD ++ K R+ ++
Sbjct: 161 V------DKAPVNTAT--------------LSDAEWMKQRM---------------SNNV 185
Query: 236 DDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEV 295
D++G+ E+ S+EE ++ + + DP + SS ++ +
Sbjct: 186 DNEGKAFEQ--------SDEESEN------------PNPKPSLPDPMDVSSPQDVARETI 225
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L + RLF+RNL ++ TE +L E F G++S+VHI +D +K+ KG+AYV +A A+
Sbjct: 226 LRTHRLFLRNLAFSCTETDLLELFRSHGDISQVHIPLDSISKQPKGLAYVTFATGADATS 285
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
A E LD FQGRLLH++PA+ ++ S E KT+K+ E ERK SG +
Sbjct: 286 AYEALDKKSFQGRLLHILPAQDQQRSFGVE---EGEMRKKTVKE--ESERKRKSLSGKSF 340
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREAND-LAVRIALGETQVIAETKKALTNAGV 474
W+ L+M D V +IA + + KS++L E D AV++AL ET +I ETK L + GV
Sbjct: 341 NWSMLYMNSDAVASSIANRMSIDKSEILSAENGDNPAVKLALAETHIIQETKSYLESQGV 400
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLAL 534
+SS FS RS+ LVKN+PY ++ ++ +F G L +V++P T+A+
Sbjct: 401 ILSS---FSTK-----ARSDTTILVKNIPYGTTLDQIRDLFTPHGQLSRVLVPPAGTMAV 452
Query: 535 VVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS--TSKGNQKNDAVVGEHDAK 592
V F P EA+ FK +AY+R +YLE PS + + T+ G + VV
Sbjct: 453 VEFERPDEASKGFKAVAYRRLGNSVIYLEKGPSGMFTDEPIQTASGGPSSLPVV------ 506
Query: 593 RALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK 652
+ EQ+ G DA + +L+VKNL+F T E + F +H+ ++ K
Sbjct: 507 -KIPEQESTG-GDAGEEVSITGGMTLYVKNLSFVTTQERFAQVF-QHLPSFAFARIQTKP 563
Query: 653 HLK--NGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC--HAKKDEQVVKK 708
K +G +SMG+GFI F VE A + +QG +LDGH+L ++ ++DE K
Sbjct: 564 DPKQPSGPRLSMGYGFIGFKDVEGAKKALKSIQGFVLDGHSLHVKFAGRGVEEDEAKNKD 623
Query: 709 AEKDKS-STKLLVRNVAFEAQRK 730
KS +TK++V+NV FEA +K
Sbjct: 624 GVNSKSRTTKVIVKNVPFEATKK 646
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P T+ +RD FS G + +L + D ++R FAF+ F + EAE A
Sbjct: 632 TKVIVKNVPFEATKKDIRDLFSAHGHLKSVRLPKKFDSRTRGFAFLEFVSRHEAENAFNA 691
Query: 61 FNKSYLDTCRISCEIA 76
++L + E A
Sbjct: 692 LRHTHLLGRHLVLEWA 707
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 479 LEEFSAGKTDGLK---RSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TK 530
+EE A DG+ R+ V +VKN+P+++++ ++ +F G L V LP T+
Sbjct: 614 VEEDEAKNKDGVNSKSRTTKV-IVKNVPFEATKKDIRDLFSAHGHLKSVRLPKKFDSRTR 672
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
A + F+ EA AF L + G L LEWA
Sbjct: 673 GFAFLEFVSRHEAENAFNALRHTHLLGRHLVLEWA 707
>gi|393219661|gb|EJD05148.1| hypothetical protein FOMMEDRAFT_18782 [Fomitiporia mediterranea
MF3/22]
Length = 828
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 238/774 (30%), Positives = 389/774 (50%), Gaps = 97/774 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQK----GEITDAKLMRTKDGKSRQFAFIGFRTEQEAEE 56
SR+ +KNLP Y+T L+ FSQK G +TD ++ +T DG+SR+F F+G++TE+EA +
Sbjct: 2 SRLIIKNLPPYITPPLLKQHFSQKDGPGGTLTDVQVAQTPDGRSRRFGFVGYKTEEEARK 61
Query: 57 AIKYFNKSYLDTCRISCEIARK-VGDPNMPRPWSRYSL-KKEKEVSEDEKNPVLAAKRGE 114
A +F+++++ RI E+ K D +PRP + + V + L + +
Sbjct: 62 ARGWFDRTFVGMTRIGVEVVEKGAKDAPIPRPNKKPRIDNSNSAVDKLPGTKPLQKSKSK 121
Query: 115 KKTIEKVTENDD------------PQLLEFLQVMQPRVKS-KMWANDTLIGLMADQKAKV 161
+K ++ T DD +L EF+QVMQPR K + WAN+ + +
Sbjct: 122 RKKMDATTSTDDNAESIGKKIKKGAELDEFMQVMQPRTKKERTWANNDDVPV-------- 173
Query: 162 SENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWS 221
G S L +N I+++ + + + E + DM++ + ++KKD
Sbjct: 174 ---------AGPSSRPLEQSQANANGISETDDSNEREEEDGVEEVDDMEWMRRKMKKDL- 223
Query: 222 DSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDP 281
EE EE D EE + +D+ S + E A +
Sbjct: 224 -------------------EEGGEERVFMQDEEEEV-PLSQDARSSKLNSEKAPEKADSE 263
Query: 282 GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
+P+ + +L++GRLF+RNL YT T+ EL HFS+FG++++VHI +D +K SKG
Sbjct: 264 PSPTDT-------ILQTGRLFLRNLSYTCTQSELEAHFSRFGDIAQVHIPLDPISKSSKG 316
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRR 401
+A+V ++ P A +A E LD + FQGRLLH++PA +KSS + + ++ KT ++
Sbjct: 317 LAFVTFSDPACAVKAFEELDKTSFQGRLLHILPAAERKSSGVKGVEDNLGGSGKTSVKKE 376
Query: 402 EEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLL--DREANDL---AVRIAL 456
+E++K AS W+ L+M D V +IA + + K+D+L D E D AV++AL
Sbjct: 377 KEKKKKEGASKEFN-WSMLYMNADAVASSIADRMNIPKADILNPDSENGDTTSAAVKLAL 435
Query: 457 GETQVIAETKKALTNAGVNVSSLEEFSAGKTDG--------LKRSNHVFLVKNLPYDSSE 508
ET +I ETK L + G+++S+ S + KRS+ V LVKN+PY ++
Sbjct: 436 AETHIIQETKAFLESEGIDLSAFSSLSYSSSANSSNSRAVRAKRSDTVILVKNIPYGTTS 495
Query: 509 GELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSD 568
++ ++F G L +V++P + T+A+V F P +A F+G+AY+R G +YLE AP
Sbjct: 496 QQIRELFEPHGELRRVVVPPSGTIAVVEFAHPDDAGRGFRGVAYRRLGGSVVYLEKAPVG 555
Query: 569 VLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTC 628
V + S +S N A+ A + + G D + + +LF+KNL F T
Sbjct: 556 VFNGSRSSD-NTTTQAI----RPTPAKQDVDIAGPIDDAKEEEAPPGSTLFLKNLAFATT 610
Query: 629 DENLRKHFGEHIKEGRILSVKVKKHLKN-------GKNVSMGFGFIEFDSVETATNVCRD 681
E L H+ V+ K K +SMGFGF+ F S + A R
Sbjct: 611 SERLTSVL-RHLPGFSFARVQTKPDPKRPSIPGQPPPRLSMGFGFVGFTSKDAAKTALRS 669
Query: 682 LQGTILDGHALILQLCHAKKDEQ------VVKKAEKDKSSTKLLVRNVAFEAQR 729
+QG ++DGHAL ++ ++Q A+ +TK++V+N+ FEA +
Sbjct: 670 IQGLVVDGHALSVKFAGRGTEDQDHDKNNSSSSAKATSKTTKMIVKNLPFEATK 723
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLA 551
+VKNLP+++++ +L +F G+L V LP ++ A + F +EA F +
Sbjct: 712 MIVKNLPFEATKSDLRSLFNTHGTLKSVRLPKKFNSHSRGYAFLEFTTRLEAERVFGAMM 771
Query: 552 YKRYKGVPLYLEWA 565
+ G L LEWA
Sbjct: 772 HTHLLGRHLVLEWA 785
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNLP T+ LR F+ G + +L + + SR +AF+ F T EAE
Sbjct: 712 MIVKNLPFEATKSDLRSLFNTHGTLKSVRLPKKFNSHSRGYAFLEFTTRLEAERVFGAMM 771
Query: 63 KSYLDTCRISCEIARKVG 80
++L + E A G
Sbjct: 772 HTHLLGRHLVLEWAEDGG 789
>gi|219120004|ref|XP_002180750.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407466|gb|EEC47402.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 837
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 251/766 (32%), Positives = 393/766 (51%), Gaps = 82/766 (10%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQK-------GEITDAKLMRTKDGKSRQFAFIGFRTEQE 53
+R+C+KNLP + LR F ++ ++TD +++ KDGKSR+ F GF T
Sbjct: 20 TRVCLKNLPPSFSSHDLRTFVRERLLPLDPHVKLTDCRVLLKKDGKSRRMGFCGFATPST 79
Query: 54 AEEAIKYFNKSYLDTCRISCEIAR-----KVGDPNMPRPWSRYSLKKEKEVSEDEKNPVL 108
A+ ++ +K+Y T ++ E A N P P + S K+EK P++
Sbjct: 80 AQVCVRQLDKAYCRTNKLVVEFATLPASLATTTANDPTP-AVESFKQEKS-----SEPII 133
Query: 109 AAKRGEKKTIEKVTENDDPQLLEFLQVM----QPRVKSKMWAND---TLIGLMADQ---K 158
K + +EK E EFL VM K+K WAND + DQ K
Sbjct: 134 TDK---DRKLEKKKE-------EFLAVMGVGSNAESKNKFWANDDGHSGTNTSGDQIATK 183
Query: 159 AKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSR--V 216
A + T +D ATE+ ++A SD+D+ KS+
Sbjct: 184 ATTGNHDDSESDSDSDDATDEDNADPLERKLPLPATEEKSSSAQ---TSDLDFLKSKKVQ 240
Query: 217 KKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANG 276
+D D+E++ + G DD + G D + + + + I +G E N
Sbjct: 241 VQDLDDAETDRMNEGPHDDSESGSSSSNSSEDCDIVTQSKEAPKGQPQIQAGYTTE--NN 298
Query: 277 EIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT 336
+ V + + D + + + + RLF+RNLP+TATED+L+ HF FG++ E H+ D D
Sbjct: 299 DSVGDHHLLAGEDDAEAKNIAANRLFLRNLPFTATEDDLKTHFEAFGSIVECHVPAD-DQ 357
Query: 337 KRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTK- 395
KRSKG A+V + A A LD + FQGRLLHV+PAR S GT
Sbjct: 358 KRSKGFAFVTFVKANDAIAAKTALDGTDFQGRLLHVLPARQAPSL-------GDGNGTNL 410
Query: 396 TLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLL----DREANDLA 451
T K+++E RK +A T W++ F+R D VV+N+A + G+ K ++L + D A
Sbjct: 411 TFKEKQERLRK-QQAESQT-GWSASFVRGDAVVDNLASRLGLQKGEILAVKDGLSSGDAA 468
Query: 452 VRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGL-KRSNHVFLVKNLPYDSSEGE 510
VR+ALGET VI E + +++ L ++ K L +RS + LVKNLP+D+++ +
Sbjct: 469 VRLALGETAVIEENRDYFRLHNIDMDVLVSATSDKDAKLVERSKTMILVKNLPHDTTKED 528
Query: 511 LAKMFGKFG-SLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDV 569
L K+F G + +++LP ++T+A+V + P +A +F+ LAY+R+K VPLYLEWAP +
Sbjct: 529 LVKVFSGAGDTPSRILLPPSRTIAVVEYSHPNDAKRSFRKLAYRRFKNVPLYLEWAP--L 586
Query: 570 LSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRV---ESRSLFVKNLNFK 626
S+ + + ND + Q+E DA+ + D + + +++VKNLNF
Sbjct: 587 ASKRIDNGSEETNDENI-----------IQIENSEDANRETDDLVEGPTPTIYVKNLNFH 635
Query: 627 TCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTI 686
T ++ LR+ F +H+K+ R +V++ K + K +SMGFGF+EF S E+A V LQG
Sbjct: 636 TTEDQLRQVFSKHVKDVR--TVRIPKKIAPVKQMSMGFGFVEFGSNESARTVLNKLQGFT 693
Query: 687 LDGHALILQLCHAKKDEQVVKKAEKDKS--STKLLVRNVAFEAQRK 730
+DGH L L+ ++ V A K+ + STK++VRNV F+A RK
Sbjct: 694 VDGHILELKPSSKTGNQGVSSTAAKNTTSKSTKVMVRNVPFQATRK 739
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 282 GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
GN SS + +S ++ VRN+P+ AT EL + F FG + +V + D +G
Sbjct: 708 GNQGVSSTAAKNTTSKSTKVMVRNVPFQATRKELLQLFGSFGPLKKVRLPKKFDGSH-RG 766
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLL 370
A+V Y + A+ A+ L + GR L
Sbjct: 767 FAFVEYMAAKEAAAAMHTLSATHLYGRHL 795
>gi|346973867|gb|EGY17319.1| multiple RNA-binding domain-containing protein [Verticillium
dahliae VdLs.17]
Length = 866
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 248/789 (31%), Positives = 397/789 (50%), Gaps = 105/789 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI VK +P +++ + FS G E+TD K++ R+ ++GF+T ++A++A++
Sbjct: 13 SRIFVKGIPPTISDADFKKHFSAGGREVTDVKVIL-----PRRIGYVGFKTSEDAKKAVR 67
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPW-SRYSLKKEKEVSEDEKNPVLAAK---RGEK 115
YFNKSY+ RI ++AR + DP + R W S S+ + N V A +K
Sbjct: 68 YFNKSYIRMSRIEVQLARPIADPALKRNWKSEQSIPAASSTALPPANAVRDANGDAAAKK 127
Query: 116 KTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
+ ++V E+ DP+L E+LQ QP K A D + ++ + + + Q + ++
Sbjct: 128 RKRDEVDES-DPRLREYLQTFQP---GKTNAADEMTEVIDSKAIAEKKKLLQDGESDDEY 183
Query: 176 ITLHVKSDKSNV--------------------ITDSQATEKSKNAA-------------A 202
T+ + +K + + D++ T S A
Sbjct: 184 ETIPTRPEKKQMREAPSNQQPKSPQQPPHMTPVEDTEDTVASPQEAEPVPKTQLDSSKVV 243
Query: 203 DELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIK 262
D + +D D+ +SR + D DD+D ++E + + D E + ++
Sbjct: 244 DPVATDDDWLRSRTNRML-------DLVADDEDIPLPPPVQKETREESADEVMEDVAAVE 296
Query: 263 DSIHSGVGE------EDANGEIVDPGNPSSSSKDVQ-QEVLESGRLFVRNLPYTATEDEL 315
D + E +A E + P+ S K+V + ++ RLF RNL ++ +ED+L
Sbjct: 297 DVGQKPLAEPSKSQDSEAPAEELPKAAPAPSDKEVAINTIRQTARLFARNLAFSVSEDDL 356
Query: 316 REHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA 375
R+HF ++G V EVHI V K + SKG AYV +A ++A A + D FQGRLLHV+PA
Sbjct: 357 RDHFEQYGEVEEVHIPVAK-SGTSKGFAYVSFASADAAVTAFQSSDGQTFQGRLLHVLPA 415
Query: 376 RHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKH 435
++ D E S S+ ++QR RK +EAS NT WN+L+M D + ++A +
Sbjct: 416 AARRDQDMDEY--SLSKLPLKVQQR---VRKKAEASTNTFNWNALYMSQDAINTSVASRL 470
Query: 436 GVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNH 495
GVSKSDLLD AV+ A+ ET VI ETK GV++++L+ KR +
Sbjct: 471 GVSKSDLLDPTDASAAVKQAVAETSVIQETKAYFLANGVDLNALK--------SQKRGDS 522
Query: 496 VFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRY 555
LVKN P+ ++ EL +F + G++ +V++P +KT+A+V + P + AAF LAY+R
Sbjct: 523 TILVKNFPHGTTLEELRTLFAEHGTVLRVLMPPSKTIAIVQY-APGQGKAAFGRLAYRRI 581
Query: 556 KGVPLYLEWAPSDVLS-----QSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDP 610
K L+LE P D+ Q + ++G+Q A V + + + LLE+ D
Sbjct: 582 KDSVLFLEKGPKDLFGPDDAVQVTPAQGDQP--AGVQKLNVTQ-LLER--------DDQE 630
Query: 611 DRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFI 667
+ V +SLFV+NLNF T E L F EG +S KVK K G+ +SMGFGF+
Sbjct: 631 EEVVGQSLFVRNLNFSTTSEGLTNAFKSL--EG-FVSAKVKTKTDAKKPGQVLSMGFGFV 687
Query: 668 EFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSS------TKLLVR 721
F S E A + + G +LD H L ++ H +D ++ E DK+ TK++V+
Sbjct: 688 AFRSSEAAQAAIKAMDGQVLDAHTLSVRASHRGQDAAEERRRE-DKAKMMAGQRTKIVVK 746
Query: 722 NVAFEAQRK 730
N+ FE +K
Sbjct: 747 NLPFEISKK 755
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I VKNLP +++ LR F+ G + +L + +R FAF F T +EA+ AI
Sbjct: 741 TKIVVKNLPFEISKKELRALFATYGTLRAVRLPKKMGQSTRGFAFAEFSTPKEAQNAIDA 800
Query: 61 FNKSYLDTCRI 71
++L R+
Sbjct: 801 LQHTHLLGRRL 811
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
+VKNLP++ S+ EL +F +G+L V LP ST+ A F P EA A L
Sbjct: 743 IVVKNLPFEISKKELRALFATYGTLRAVRLPKKMGQSTRGFAFAEFSTPKEAQNAIDALQ 802
Query: 552 YKRYKGVPLYLEW 564
+ G L L++
Sbjct: 803 HTHLLGRRLVLDY 815
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ V+NLP+ ++ ELR F+ +G + V + K + ++G A+ ++ P+ A AI+
Sbjct: 742 KIVVKNLPFEISKKELRALFATYGTLRAVRL-PKKMGQSTRGFAFAEFSTPKEAQNAIDA 800
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 801 LQHTHLLGRRL 811
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ VKNL F+ + LR F + G + +V++ K + + GF F EF + + A N
Sbjct: 743 IVVKNLPFEISKKELRALFATY---GTLRAVRLPKKMGQS---TRGFAFAEFSTPKEAQN 796
Query: 678 VCRDLQGTILDGHALIL 694
LQ T L G L+L
Sbjct: 797 AIDALQHTHLLGRRLVL 813
>gi|212540104|ref|XP_002150207.1| pre-rRNA processing protein Mrd1, putative [Talaromyces marneffei
ATCC 18224]
gi|210067506|gb|EEA21598.1| pre-rRNA processing protein Mrd1, putative [Talaromyces marneffei
ATCC 18224]
Length = 812
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 242/764 (31%), Positives = 374/764 (48%), Gaps = 99/764 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP ++ + L FS + +TD+ ++ +R+ F+GF+ + A+EA KY
Sbjct: 4 TRVFVSGLPPTLSNEDLGKHFSSRFPVTDSHVI-----PNRRIGFVGFKDAEIAKEAAKY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVS-----EDEKNPVLAAKRGEK 115
FNK++L +IS E+AR G+ R +++ E S D +NP
Sbjct: 59 FNKTFLRMSKISVEMARPAGESKPTRNRNQFHRDSTSEASNLKRKRDAENP--------- 109
Query: 116 KTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIG--------LMADQKAKVSENISQ 167
DD +L EFL VMQ K++ WAND +I ++ + + E S+
Sbjct: 110 --------KDDAKLQEFLNVMQHPSKTRTWANDDIIPAATTPLEPVVVETQDPSHEQPSR 161
Query: 168 AIKGG---------EKSITLHVKSDKSNVITDSQATEKSKNAAA---DELMSDMDYFKSR 215
+K + + T V++D + + + +K + A+ D+ SDMD+ +S+
Sbjct: 162 PVKKSKVVETETPRQATKTSAVQTDTNGDGSQPERGDKPEGEASEEEDQPKSDMDWLRSK 221
Query: 216 VKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDAN 275
+ G D+++ E + N + + + V EE
Sbjct: 222 TSRLL----------GLLDEEEQEESSPQPAAPANNTVEPIEEEDSDEVEETLVAEE--- 268
Query: 276 GEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKD 335
P + DV+ + SGRLF+RNL Y ATE +L F+ FG + E+H+ D
Sbjct: 269 -----PAEEKDYNADVEL-IRISGRLFLRNLAYDATEADLETIFAPFGKIDEIHVAFDTR 322
Query: 336 TKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTK 395
T SKG AY+ Y P SA A + LD FQGRLLH++PA KKS + S
Sbjct: 323 TTSSKGFAYIQYVDPSSAIEAYKNLDGKDFQGRLLHILPASAKKSYKINDYELS----KL 378
Query: 396 TLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIA 455
LKQ+++ +R+ EAS +T WNSL+M D V+ +IA + GVSKSDLLD ++D AV+ A
Sbjct: 379 PLKQQKQVKRRM-EASSSTFNWNSLYMNSDAVMSSIADRLGVSKSDLLDPTSSDAAVKQA 437
Query: 456 LGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMF 515
ET VI ETK T GVN+ S ++ G T LVKN Y E+ K+F
Sbjct: 438 HAETHVIQETKAYFTANGVNIDSFKQRERGTT--------AILVKNFSYGVKAAEIRKLF 489
Query: 516 GKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
FG L ++++P + T+A+V F +P EA+ AFKGLAY++ L+LE AP D+ T
Sbjct: 490 EPFGQLTRLLIPPSGTIAIVEFAKPDEASKAFKGLAYRKLGDSILFLERAPKDLFESPPT 549
Query: 576 SKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKH 635
G+ V G + E D +P ++ + +LFV+NLNF T L +
Sbjct: 550 --GSALIAGVEGPEGKSQGF--SAAETFAAEDNEP-QLPTSTLFVRNLNFTTTSARLSEV 604
Query: 636 FGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHAL 692
F +G L+ KVK + G+ +SMGFGFIEF + E A + G LD H L
Sbjct: 605 FASL--DG-FLTAKVKTKTDPKRPGETLSMGFGFIEFRTKEQAQAALAVMDGYTLDQHKL 661
Query: 693 ILQLCH-------AKKDEQVVKKAEKDKSSTKLLVRNVAFEAQR 729
+++ H +++ E KK + TK++++N+ F+A +
Sbjct: 662 VVKTSHKGMDAAESRRQEDTAKKVAARR--TKIIIKNLPFQATK 703
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R FAF F + +EAE A+
Sbjct: 690 TKIIIKNLPFQATKHDVRSLFGAYGQLRSVRVPKKFDRSARGFAFADFVSSREAENAMDA 749
Query: 61 FNKSYLDTCRISCEIA 76
++L ++ E A
Sbjct: 750 LKNTHLLGRKLVLEYA 765
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ ++R FG + G++ SV+V K + GF F +F S A N
Sbjct: 692 IIIKNLPFQATKHDVRSLFGAY---GQLRSVRVPKKFDRS---ARGFAFADFVSSREAEN 745
Query: 678 VCRDLQGTILDGHALILQLCHA 699
L+ T L G L+L+ A
Sbjct: 746 AMDALKNTHLLGRKLVLEYASA 767
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E+ R+FV LP T + ++L +HFS V++ H++ ++ I +V + E A
Sbjct: 1 MENTRVFVSGLPPTLSNEDLGKHFSSRFPVTDSHVIPNRR------IGFVGFKDAEIAKE 54
Query: 356 AIEVLDNSIFQGRLLHVMPAR----HKKSSDKQELHNSTSQGTKTLKQRREEE 404
A + + + + + V AR K + ++ + H ++ LK++R+ E
Sbjct: 55 AAKYFNKTFLRMSKISVEMARPAGESKPTRNRNQFHRDSTSEASNLKRKRDAE 107
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R F +G + V V K + ++G A+ + A A++
Sbjct: 691 KIIIKNLPFQATKHDVRSLFGAYGQLRSVR-VPKKFDRSARGFAFADFVSSREAENAMDA 749
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHN 388
L N+ GR L + A + ++E+ N
Sbjct: 750 LKNTHLLGRKLVLEYASAEAIDAEEEIRN 778
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
++KNLP+ +++ ++ +FG +G L V +P S + A F+ EA A L
Sbjct: 693 IIKNLPFQATKHDVRSLFGAYGQLRSVRVPKKFDRSARGFAFADFVSSREAENAMDALKN 752
Query: 553 KRYKGVPLYLEWAPSDVL 570
G L LE+A ++ +
Sbjct: 753 THLLGRKLVLEYASAEAI 770
>gi|322712046|gb|EFZ03619.1| MRD1-like protein [Metarhizium anisopliae ARSEF 23]
Length = 841
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 253/789 (32%), Positives = 386/789 (48%), Gaps = 120/789 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI +K LP +TE R FS EITD KL+ R+ ++G+++ +A A+K
Sbjct: 4 SRIFIKGLPPNITEAEFRKHFSAGNREITDVKLI-----PQRRIGYVGYKSAHDAAGAVK 58
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSR--YSLKKEKEVSEDEKNPVLAAKR--GEK 115
YFN+SY+ RIS E AR + D SR +S ED P A+ K
Sbjct: 59 YFNRSYIRMSRISVETARPISDL-----ASRKGHSGSCNLGAPEDHTAPRSASDHDVNTK 113
Query: 116 KTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQ-----KAKVSENIS---- 166
K + E DP+L EFLQVM+ + + A+D+ + AD + V E S
Sbjct: 114 KRKREEQETADPRLREFLQVMRSGREGAV-ADDSNAAVGADHAFSHGEVAVPEGESDDEY 172
Query: 167 -QAIKGGEKSITLHVKSDKSNVIT--------------------------DSQATEKSKN 199
Q EKS + + DKS+ + DS+ T++ +
Sbjct: 173 EQIPSRTEKSRRIEPRQDKSDNVARQPPPRDERTPKDNIKEAGENKAEAIDSEMTDQGPS 232
Query: 200 AAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDS 259
A +D D+ +SR + + +D ++G + D E++ END S
Sbjct: 233 ATG---ATDDDWLRSRTNRLLDLVDPDDLASGAVLNPVDATTEQDMENDR-------LSS 282
Query: 260 IIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHF 319
D + G + A + ++++D + + RLFVRNLPY+ATED++RE F
Sbjct: 283 HSSDEVTPGTTTDVATSK-------ETATEDAVSAISRTSRLFVRNLPYSATEDDIRETF 335
Query: 320 SKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKK 379
KFG + EVH+ + +KG A VL+ A RA + LD FQGR+LH++PA K+
Sbjct: 336 DKFGTLQEVHLPLTA-AGATKGFAMVLFTNSSDAVRAFQALDGVTFQGRILHIIPADAKR 394
Query: 380 SSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSK 439
E S K +++ RK +EA+ ++ WNSL+M D V +IA + GVSK
Sbjct: 395 EQGLDEFGIS-----KMPLKKQNMIRKKAEAASSSFNWNSLYMSQDAVNASIASRLGVSK 449
Query: 440 SDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLV 499
S+LLD + D A++ A+ ET VI ETK GV++ + + +R + LV
Sbjct: 450 SELLDPTSADAAIKQAIAETTVIQETKAYFAANGVDLDAFKS--------QRRGDTTILV 501
Query: 500 KNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVP 559
KN P+ ++ EL KMF + G + +V++P T T+A+V F + A AAF LAY+R K
Sbjct: 502 KNFPFGTTMEELRKMFEEHGQVLRVLMPPTGTIAIVQFAQANHAKAAFGKLAYRRIKDSV 561
Query: 560 LYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGV---TDADI-----DPD 611
L+LE AP D+L + + ++ D QQ GV T +D+ +
Sbjct: 562 LFLEKAPKDLLRGDISEQTSRATD--------------QQATGVRKFTVSDLLSSGDKAE 607
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIE 668
VE+ SLF++NLNF T L + F E + +G +S +VK + K G+ +SMGFGF E
Sbjct: 608 EVETTSLFIRNLNFATTTSRLAEAF-ESL-DG-FVSARVKTKMDPKKPGQTLSMGFGFAE 664
Query: 669 FDSVETATNVCRDLQGTILDGHALILQLCHAKKD-------EQVVKKAEKDKSSTKLLVR 721
F S A + + G +LDGH L ++ H +D E KKA + TK++++
Sbjct: 665 FRSKTQAQAALKAMDGHVLDGHTLGVKASHKGQDAAEERRREDRAKKAAAQR--TKIVIK 722
Query: 722 NVAFEAQRK 730
N+ F+A +K
Sbjct: 723 NLPFQATKK 731
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R FAF F T +EAE A+
Sbjct: 717 TKIVIKNLPFQATKKDVRSLFGTYGQLRSVRVPKKADFTARGFAFADFVTPREAENALNA 776
Query: 61 FNKSYL 66
++L
Sbjct: 777 LKDTHL 782
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R F +G + V + D ++G A+ + P A A+
Sbjct: 718 KIVIKNLPFQATKKDVRSLFGTYGQLRSVRVPKKADFT-ARGFAFADFVTPREAENALNA 776
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 777 LKDTHLLGRRL 787
>gi|169855509|ref|XP_001834421.1| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
gi|116504503|gb|EAU87398.1| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
Length = 807
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 240/770 (31%), Positives = 370/770 (48%), Gaps = 125/770 (16%)
Query: 1 SRICVKNLPKYVTEDRLRDFF-------SQKGEITDAKLMRTKDGKSRQFAFIGFRTEQE 53
+R+ +KNLP Y T +RLR F + +G+ITD K+ DG SR+F F+G++T +E
Sbjct: 4 TRLVIKNLPPYCTPERLRQHFEGKHNPGAPRGQITDVKVSFKPDGTSRRFGFVGYKTPEE 63
Query: 54 AEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPV---LAA 110
A +A ++F+++++D+ RIS + V D RP R L ++ S + +
Sbjct: 64 AVKAKEWFDRTFIDSARISVAL---VEDKPDARPNKRRRLASDEPSSGSNTTKLGKPSKS 120
Query: 111 KRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIK 170
+ T N + L FL+VMQPR K WAND A V E + A
Sbjct: 121 SDPSSSSTAPSTSNSNKHLDTFLEVMQPRNKGPSWAND----------AAVPEPVVPAAP 170
Query: 171 GGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSA 230
E ++ K + S A E +SDM++ + R+ + +
Sbjct: 171 AEEADASMEDKPEAS---------------AEQEGLSDMEWMRRRMTANVDKVNTAVFEQ 215
Query: 231 GDDDDD---DDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSS 287
DD++D D GE+EE E P+
Sbjct: 216 SDDEEDGKKDAGEKEEVVE-----------------------------------AAPARP 240
Query: 288 SKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
++ + ++ RLFVRNL ++ TE+EL E FS FGNV + HI D TK+ KG+AY+ +
Sbjct: 241 EDPTEETIRQTARLFVRNLTFSCTEEELLELFSPFGNVVKAHIPTDATTKQGKGMAYITF 300
Query: 348 AIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKA 407
+ PESA A + LD FQGRLLH++ A +K + E +G K++K+ R +RKA
Sbjct: 301 SSPESAVAAYKSLDKKPFQGRLLHILGAVDRKPKAEAE-----DEGKKSVKEERAAKRKA 355
Query: 408 SEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL----AVRIALGETQVIA 463
+G W+ L+M D V +IA + + K+ +L+ + ++ AV++AL ET +I
Sbjct: 356 --LAGKEFNWSMLYMNSDAVASSIADRMNIPKTSILNPDPSETTTNPAVKLALAETHIIT 413
Query: 464 ETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDK 523
ETK L + GV +SS RS+ + LVKN+PY ++E ++ +MF G L +
Sbjct: 414 ETKTFLESQGVLLSSF--------TSKVRSDTILLVKNIPYGTTEPQIREMFEPHGELVR 465
Query: 524 VILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKND 583
V++P T+A+V F++ EAA AFK +AY+R +YLE P + ++
Sbjct: 466 VLVPPAGTIAVVEFVKGEEAAKAFKAVAYRRLGNSVVYLEKGPVGMFVSDPEEVEKRR-- 523
Query: 584 AVVGEHDAKRALLEQQL--------------EGVTDADIDPDRVESRSLFVKNLNFKTCD 629
V E D R LLE + G T + V +L+VKNL+F T
Sbjct: 524 -VTTEED--RRLLESSVIKVPEALPIETTDSAGETAGGEGQETVAGSTLYVKNLSFATTQ 580
Query: 630 ENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILD 688
E L F H+ ++ K K G +SMG+GFI F VE A + LQG ++D
Sbjct: 581 ERLVSLF-SHLPSFSFARIQTKPDPKRPGARLSMGYGFIGFKDVEGARKALKSLQGFVVD 639
Query: 689 GHALILQLCHAKKDEQVVKK--------AEKDKSSTKLLVRNVAFEAQRK 730
GH L +++ +DE V K+ A +TK++V+NV FEA +K
Sbjct: 640 GHELHVKVAGRGRDE-VAKELGVATSNDATGKSRTTKMIVKNVPFEATKK 688
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P T+ +RD F G++ +L R D ++R FAF+ F + EAE A
Sbjct: 674 TKMIVKNVPFEATKKDIRDLFGAHGKLKSVRLPRKFDSRTRGFAFLEFVSRHEAENAFNA 733
Query: 61 FNKSYLDTCRISCEIARKVG 80
++L + E A++ G
Sbjct: 734 LRHTHLLGRHLVLEWAQEEG 753
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
+VKN+P+++++ ++ +FG G L V LP T+ A + F+ EA AF L
Sbjct: 676 MIVKNVPFEATKKDIRDLFGAHGKLKSVRLPRKFDSRTRGFAFLEFVSRHEAENAFNALR 735
Query: 552 YKRYKGVPLYLEWA 565
+ G L LEWA
Sbjct: 736 HTHLLGRHLVLEWA 749
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ VKN+ F+ +++R FG H G++ SV++ + + + GF F+EF S A N
Sbjct: 676 MIVKNVPFEATKKDIRDLFGAH---GKLKSVRLPRKFDS---RTRGFAFLEFVSRHEAEN 729
Query: 678 VCRDLQGTILDGHALILQLCH 698
L+ T L G L+L+
Sbjct: 730 AFNALRHTHLLGRHLVLEWAQ 750
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 296 LESGRLFVRNLPYTATEDELREHF-------SKFGNVSEVHIVVDKDTKRSKGIAYVLYA 348
+ S RL ++NLP T + LR+HF + G +++V + D S+ +V Y
Sbjct: 1 MSSTRLVIKNLPPYCTPERLRQHFEGKHNPGAPRGQITDVKVSFKPDGT-SRRFGFVGYK 59
Query: 349 IPESASRAIEVLDNSIF 365
PE A +A E D +
Sbjct: 60 TPEEAVKAKEWFDRTFI 76
>gi|409076284|gb|EKM76657.1| hypothetical protein AGABI1DRAFT_122567 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 755
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 238/743 (32%), Positives = 374/743 (50%), Gaps = 111/743 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG----EITDAKLMRTKDGKSRQFAFIGFRTEQEAEE 56
SR+ +KNLP YVT RLR F Q+G +TD K+ DG SR+F F+G++T++EA
Sbjct: 2 SRLMIKNLPSYVTPVRLRQHFEQQGCPAGILTDVKVAYKSDGTSRRFGFVGYKTDEEAFA 61
Query: 57 AIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKK 116
A +F+K+++D+ RI + D PRP R L S E NP+ + K
Sbjct: 62 ARNWFDKTFIDSTRIHVTLIDGSKDAPAPRPNKRPRLGP----SPIETNPLPIRESKSDK 117
Query: 117 TIEKVTENDDPQLLEFLQVMQPRVK-SKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
++ K E Q EFL+VM+PR K +WAN E + I+ E+
Sbjct: 118 SMMK--EKLPSQAEEFLEVMKPRTKKGPIWAN---------------EAQPKDIRPQEQL 160
Query: 176 ITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDD 235
+ DK+ V T + +SD ++ K R+ ++
Sbjct: 161 V------DKAPVNTAT--------------LSDAEWMKQRM---------------SNNV 185
Query: 236 DDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEV 295
D++G+ E+ S+EE ++ D + DP + S ++ +
Sbjct: 186 DNEGKAFEQ--------SDEESEN------------PDPKPSLPDPMDVGSPQDVARETI 225
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L + RLF+RNL ++ TE +L E F G++S+VHI +D +K+ KG+A+V +A A+
Sbjct: 226 LRTHRLFLRNLAFSCTETDLLELFRSHGDISQVHIPLDSLSKQPKGLAFVTFATGADATS 285
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
A E LD FQGRLLH++PA+ ++ E KT+K+ ++ +RK+ SG +
Sbjct: 286 AYEALDKKSFQGRLLHILPAQDQQRPFGVE---EGEMRKKTVKEEKQTKRKS--LSGKSF 340
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREAND-LAVRIALGETQVIAETKKALTNAGV 474
W+ L+M D V +IA + ++KS++L E D AV++AL ET +I ETK L + GV
Sbjct: 341 NWSMLYMNSDAVASSIANRMKINKSEILSAENGDNPAVKLALAETHIIQETKSYLESQGV 400
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLAL 534
+SS FS RS+ LVKN+PY ++ ++ +F G L +V++P T+A+
Sbjct: 401 ILSS---FSTK-----ARSDTTILVKNIPYGTTLDQIRDLFTPHGQLSRVLVPPAGTMAV 452
Query: 535 VVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS--TSKGNQKNDAVVGEHDAK 592
V F P EA+ FK +AY+R +YLE PS + + T+ G + VV
Sbjct: 453 VEFERPDEASKGFKAVAYRRLGNSVIYLEKGPSGMFTDEPIQTAAGGPSSLPVV------ 506
Query: 593 RALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK 652
+ EQ+ G DA + +L+VKNL+F T E + F +H+ ++ K
Sbjct: 507 -KIPEQESTG-GDAGEEVSITGGMTLYVKNLSFVTTQERFAQVF-QHLPSFAFARIQTKP 563
Query: 653 HLK--NGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC--HAKKDEQVVKK 708
K +G +SMG+GFI F VE A + +QG +LDGH+L ++ ++DE K
Sbjct: 564 DPKQPSGPRLSMGYGFIGFKDVEGAKKALKSIQGFVLDGHSLHVKFAGRGVEEDEAKNKD 623
Query: 709 AEKDKS-STKLLVRNVAFEAQRK 730
KS +TK++V+NV FEA +K
Sbjct: 624 GVNSKSRTTKVIVKNVPFEATKK 646
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P T+ +RD FS G + +L + D ++R FAF+ F + EAE A
Sbjct: 632 TKVIVKNVPFEATKKDIRDLFSAHGHLKSVRLPKKFDSRTRGFAFLEFVSRHEAENAFNA 691
Query: 61 FNKSYLDTCRISCEIA 76
++L + E A
Sbjct: 692 LRHTHLLGRHLVLEWA 707
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 479 LEEFSAGKTDGLK---RSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TK 530
+EE A DG+ R+ V +VKN+P+++++ ++ +F G L V LP T+
Sbjct: 614 VEEDEAKNKDGVNSKSRTTKV-IVKNVPFEATKKDIRDLFSAHGHLKSVRLPKKFDSRTR 672
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
A + F+ EA AF L + G L LEWA
Sbjct: 673 GFAFLEFVSRHEAENAFNALRHTHLLGRHLVLEWA 707
>gi|297693058|ref|XP_002823848.1| PREDICTED: probable RNA-binding protein 19 [Pongo abelii]
Length = 999
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 183/488 (37%), Positives = 280/488 (57%), Gaps = 55/488 (11%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +++K Q +L ESGRLFVRNLPYT+TE++L + FSK+G +SE+H
Sbjct: 414 GAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYP 473
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A++ + PE A +A +D +FQGR+LHV+P+ KK + + ++++
Sbjct: 474 IDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKKEASE----DASA 529
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ AS + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 530 LGSSSYKKKKEAQDKANSASSHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSV 587
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 588 AVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAE 641
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L + FG+FGSL +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 642 LQETFGRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGVF 701
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPD------------------- 611
S ++ K + DA + A E +G T D +P
Sbjct: 702 SSTAPQK-KKLQDAPSEPMEKDPAEPETVPDGKTPEDENPTEEGADNSSAKMEEEEEEEE 760
Query: 612 ----RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGF 666
R+ +LF+KNLNF T +E L++ F K G + S + KK K G +SMGFGF
Sbjct: 761 EEEERLPGCTLFIKNLNFDTTEEKLKEVFS---KVGTVKSCSISKKKNKAGALLSMGFGF 817
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRN 722
+E+ E A + LQG I+DGH L +++ V K+ + ++++K+LVRN
Sbjct: 818 VEYRKPEQAQKALKQLQGHIVDGHKLEVRISERATKPAVTSARKKQVPRKQTTSKILVRN 877
Query: 723 VAFEAQRK 730
+ F+A +
Sbjct: 878 IPFQAHSR 885
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 171/333 (51%), Gaps = 42/333 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A+K+
Sbjct: 40 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKALKH 99
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P + +KK
Sbjct: 100 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSATPEIKKDEKKKKVA 159
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKGGEK 174
+EK+ E D + EFL V Q R ++ WAND + K+K S+ ++ G++
Sbjct: 160 GQLEKLKE--DTEFQEFLSVHQRRAQAATWANDGPDAESSKGKSKPASDYLNFDSDSGQE 217
Query: 175 SITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSR-VKKDWSDSESEDDSAGDD 233
S + + + + +A+ + K A EL SDMDY KS+ VK S S E++S +
Sbjct: 218 S-----EEEGAGKDLEEEASLEPKTAVQKEL-SDMDYLKSKMVKSGSSSSSEEEESEDEA 271
Query: 234 DDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANGEIVDPG 282
D+G E EEE++ ++++ G G+E +A E P
Sbjct: 272 VHCDEGSEAEEEDSP--------TTPVLQEGNSKGAGQEQGMPAGKKRPPEARAETEKPA 323
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDEL 315
N Q+E + +R P+ TE +
Sbjct: 324 N--------QREPTTCHTVKLRGAPFNVTEHSM 348
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP T V FL +A
Sbjct: 867 KQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTGTHRGFGFVDFLTKQDA 926
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 927 KRAFNALCHSTHLYGRRLVLEWADSEVTLQA 957
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHI---VVDKDTK 337
P S+ K V ++ S ++ VRN+P+ A E+RE FS FG + V + V T
Sbjct: 854 PAVTSARKKQVPRKQTTS-KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTGTH 912
Query: 338 RSKGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
R G +V + + A RA L +S GR L
Sbjct: 913 R--GFGFVDFLTKQDAKRAFNALCHSTHLYGRRL 944
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 871 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTGTHRGFGFVDFLTKQDAKRAF 930
>gi|119189731|ref|XP_001245472.1| hypothetical protein CIMG_04913 [Coccidioides immitis RS]
gi|392868364|gb|EAS34142.2| multiple RNA-binding domain-containing protein 1 [Coccidioides
immitis RS]
Length = 813
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 233/757 (30%), Positives = 367/757 (48%), Gaps = 82/757 (10%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D LR F+ + E+TDA ++ R+ F+GF+ A+ A+ Y
Sbjct: 4 TRVFVSGLPPTLNNDGLRSHFASRFEVTDAHVI-----PKRRIGFVGFKDHNSAQNAVNY 58
Query: 61 FNKSYLDTCRISCEIARKV-GDPNM-PRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTI 118
FNK+++ +I+ E+A+ V P + R +R S ++ + S K+ L KRG
Sbjct: 59 FNKTFIRMSKIAVELAKPVDAAPEVNSRSKARNSSPRDADTSS--KSGSLKRKRG----- 111
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWA------------------NDTLIGLMADQKAK 160
E DDP+L EFL MQ K+K WA N + M ++ K
Sbjct: 112 ---LEEDDPKLQEFLNTMQAPTKTKTWADTGTDLTTSLPFHNKDSKNAEIPNEMPTKRVK 168
Query: 161 VSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDW 220
+ + E S +L + D+QAT + +A SD D+ +SR +
Sbjct: 169 AALEPDLPKESSETSQSLSTGLSNRELNNDAQATAEPAESAP---QSDADWLRSRTSRLL 225
Query: 221 SDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVD 280
DD++D G E N S+ D HS V E E D
Sbjct: 226 GLL---------DDEEDAGRLVAETTNASPPVSHRIQHEPTTD--HSDVSAEK---EDKD 271
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
P + + + + E+GRLF+RNLPY TE++L+ F++FG + E+H+ D SK
Sbjct: 272 PAGSTDAIDANVKLIRETGRLFIRNLPYDTTEEDLQSEFARFGKLEELHVAFDSRHSTSK 331
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
G AY + P+SA A + LD FQGRL+HV+PA KK+ E S K +R
Sbjct: 332 GFAYAQFFDPDSAIEAYKQLDGKDFQGRLMHVLPASSKKTYKINEYELS-----KLPLKR 386
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
+++ ++ +EA+ +T WNSL+M D V+ ++A + GV KS +LD ++D AV+ A ET
Sbjct: 387 QQQIKRRAEAASSTFTWNSLYMNADAVMASVAERLGVPKSAILDPTSSDAAVKQAHAETH 446
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
+I ETK + GVN+ S ++ +R N LVKN + +L K+F +G
Sbjct: 447 IIQETKAYFSANGVNLDSFKQ--------RERGNTAILVKNFSFGVKAEDLKKLFDPYGQ 498
Query: 521 LDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL-SQSSTSKGN 579
+ ++++P + T+A+V F P E AF+GLAY++ L+LE AP + + +T
Sbjct: 499 ITRLLMPPSGTIAIVEFSMPDECQKAFRGLAYRKLGDSILFLEKAPKGLFEGKPTTHIAV 558
Query: 580 QKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEH 639
Q AV + E + VES +L+V+NLNF T +L F +
Sbjct: 559 QPQKAVAPAFSTSETFKAGEPE---------NEVESSTLYVRNLNFSTTTSSLMDVF-KP 608
Query: 640 IKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
+ VK K KN G+ +SMGFGF+EF + A + G LD H L+++ H
Sbjct: 609 LDGFLSAQVKTKPDPKNPGERLSMGFGFVEFRTRAQAQAALAAMNGYKLDQHELVIRPSH 668
Query: 699 AKKD---EQVVKKAEKDKSS--TKLLVRNVAFEAQRK 730
D +Q + A K ++ TK++++N+ F+A +K
Sbjct: 669 KATDSAEQQRRQDAAKKNAARRTKIIIKNLPFQATKK 705
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ ++++ FG + G++ SV+V K + GF F +F S A N
Sbjct: 693 IIIKNLPFQATKKDVQSLFGAY---GQLRSVRVPKKFDR---TARGFAFADFVSAREAEN 746
Query: 678 VCRDLQGTILDGHALILQLC--HAKKDEQVVKKAEK 711
L+ T L G L+L+ A E+ ++K EK
Sbjct: 747 AMDALRNTHLLGRKLVLEFVSEEAVDPEEEIQKIEK 782
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ ++ F G++ ++ + D +R FAF F + +EAE A+
Sbjct: 691 TKIIIKNLPFQATKKDVQSLFGAYGQLRSVRVPKKFDRTARGFAFADFVSAREAENAMDA 750
Query: 61 FNKSYLDTCRISCE-IARKVGDP 82
++L ++ E ++ + DP
Sbjct: 751 LRNTHLLGRKLVLEFVSEEAVDP 773
>gi|425772895|gb|EKV11275.1| hypothetical protein PDIG_51110 [Penicillium digitatum PHI26]
gi|425782122|gb|EKV20050.1| hypothetical protein PDIP_20330 [Penicillium digitatum Pd1]
Length = 835
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 240/785 (30%), Positives = 389/785 (49%), Gaps = 116/785 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D+L+ F + ++TDA ++ R+ F+GF++ A++A+K+
Sbjct: 4 TRVFVGGLPPTCSNDQLKKHFETRFQVTDAHVL-----PKRRMGFVGFKSHDAAQQAVKH 58
Query: 61 FNKSYLDTCRISCEIARKV--GDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTI 118
FNK+Y+ +I+ +IAR V D P R + + S D N + + GE K+
Sbjct: 59 FNKTYMKMSKIAVDIARPVDSNDAKDAHPTRRCDTTNDNDASLD--NNLKRKRDGENKS- 115
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWAND-TLIGLMAD---------QKAKVSENISQA 168
+DP+L E+L +M K++ WAND +I D QK ++ E S
Sbjct: 116 ------EDPKLQEYLSLMGASSKTRTWANDDEMIKPSVDTVPVINPTAQKEEIQELPSHW 169
Query: 169 IKG-GEKSITLHVKSDKSNVITDSQATEKS------KNAAADEL-----MSDMDYFKSRV 216
K EK +++ ++ D E++ N+A E+ +SD D+ +S+
Sbjct: 170 KKAKTEKPLSVVDTEQPEPMVIDKHEGEEALEAPEHDNSAEREVEETARVSDADWLRSKT 229
Query: 217 KKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSN-----EECDSIIKDSIHSGVGE 271
+ + EEE++E + H ++ + + S +
Sbjct: 230 SRLLGLLD---------------EEEQDEFDQHKAAASTTLPTKTASPPVSSRAESPQRD 274
Query: 272 EDANGEIVDPGNPSSSSKDVQQEVLE----------SGRLFVRNLPYTATEDELREHFSK 321
E++ +D P+++ D E + S RLF+RNL Y TE +L+ F +
Sbjct: 275 EESRTAAIDKIVPNTTDVDSVTEAMPEDPNVDLIRNSARLFLRNLAYDTTESDLQPIFER 334
Query: 322 FGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS 381
FGN+ E+HI D + SKG AYV Y++ ++A A LD FQGRLLH++PA KK+
Sbjct: 335 FGNIEEIHIAFDTRSTTSKGFAYVQYSLADAAIDAYRNLDGKHFQGRLLHILPASAKKTY 394
Query: 382 --DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSK 439
D+ EL LK++RE +RK + ASG++ +WNSL+M D V+ ++A + GVSK
Sbjct: 395 KIDEYELSKL------PLKKQREIKRKQN-ASGSSFSWNSLYMNADAVMSSVAGRLGVSK 447
Query: 440 SDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLV 499
S+LLD ++D AV+ A ET VI ETK + GVN+ + +E +R N LV
Sbjct: 448 SELLDPTSSDAAVKQAHAETHVIQETKAYFASNGVNIDAFKE--------RERGNTAILV 499
Query: 500 KNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVP 559
KN Y + EL +F +G + ++++P + T+A+V F +P EA AFKGLAY++
Sbjct: 500 KNFSYGVTSAELRGLFDPYGKIIRLLMPPSGTIAIVEFAQPDEAQKAFKGLAYRKMGDSI 559
Query: 560 LYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADI----DP-DRVE 614
L+LE AP ++ S+ + A+ E K +G + AD +P D V
Sbjct: 560 LFLEKAPKNLFDGSAVPR------ALAPETRGKD-------QGFSTADTFAADEPDDSVA 606
Query: 615 SRSLFVKNLNFKTCDENLRKHFG--EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ +LFVKNLNF T +E + F + GRI + K + G+ +SMGF F +F +
Sbjct: 607 TTTLFVKNLNFSTTNEKFLEVFRSLDGFITGRIKTKPDPK--RPGQTLSMGFAFADFKTK 664
Query: 673 ETATNVCRDLQGTILDGHALILQLCHAKKD-------EQVVKKAEKDKSSTKLLVRNVAF 725
A + G LD H L+++ H KD E KK + TK++++N+ F
Sbjct: 665 AQAQAALSAMNGYKLDQHELLIRASHKGKDAAEERRREDTAKKVAARR--TKIIIKNLPF 722
Query: 726 EAQRK 730
+A +K
Sbjct: 723 QATKK 727
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 29/225 (12%)
Query: 477 SSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVV 536
S+ + F+A + D + +F VKNL + ++ K F SLD I KT
Sbjct: 591 STADTFAADEPDDSVATTTLF-VKNLNFSTTN---EKFLEVFRSLDGFITGRIKTKP--- 643
Query: 537 FLEPVEAAAAFK-GLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRAL 595
+P G A+ +K + LS + K +Q + H K A
Sbjct: 644 --DPKRPGQTLSMGFAFADFK-----TKAQAQAALSAMNGYKLDQHELLIRASHKGKDAA 696
Query: 596 LEQQLEGVTDADIDPDRVESR--SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKH 653
E++ E +V +R + +KNL F+ +++R FG + G++ SV+V +
Sbjct: 697 EERRREDTAK------KVAARRTKIIIKNLPFQATKKDIRSLFGAY---GQLRSVRVPQK 747
Query: 654 LKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
+ + GFGF +F S A N L+ T L G L+L+ +
Sbjct: 748 FDH---TARGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFVN 789
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 26/142 (18%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+FV LP T + D+L++HF V++ H++ KR G +V + ++A +
Sbjct: 1 MESTRVFVGGLPPTCSNDQLKKHFETRFQVTDAHVL----PKRRMG--FVGFKSHDAAQQ 54
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGT---------KTLKQRREEERK 406
A++ + + + + V AR S+D ++ H + T LK++R+ E K
Sbjct: 55 AVKHFNKTYMKMSKIAVDIARPVDSNDAKDAHPTRRCDTTNDNDASLDNNLKRKRDGENK 114
Query: 407 ASE-----------ASGNTKAW 417
+ + AS T+ W
Sbjct: 115 SEDPKLQEYLSLMGASSKTRTW 136
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R F F F + +EAE A+
Sbjct: 713 TKIIIKNLPFQATKKDIRSLFGAYGQLRSVRVPQKFDHTARGFGFADFVSAREAENAMDA 772
Query: 61 FNKSYLDTCRISCEI 75
++L R+ E
Sbjct: 773 LKNTHLLGRRLVLEF 787
>gi|452844020|gb|EME45954.1| hypothetical protein DOTSEDRAFT_168162 [Dothistroma septosporum
NZE10]
Length = 822
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 251/769 (32%), Positives = 389/769 (50%), Gaps = 99/769 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE-ITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
+RI VK LP +E LR FSQ ITD K R+F ++GF+T ++A+ +K
Sbjct: 5 TRIFVKGLPPKFSETELRKHFSQNDRLITDIKYF-----PDRRFGYVGFKTHEDAQAVVK 59
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIE 119
YFN++Y+ RI E+AR + + P P +R S+ +D P +KR K+ +E
Sbjct: 60 YFNRTYVRMSRIGVELARPIEE-RAP-PTARKSV-------QDTVAPSTPSKR--KREVE 108
Query: 120 KVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGL---------------MAD-------- 156
+ DDP+L EFL+ + + K K A D L+ AD
Sbjct: 109 TDVQ-DDPKLKEFLEAYKSKSKRK-EAEDALMQDAAAGAAQEDATLEVPTADSDDEYEQV 166
Query: 157 -QKAKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSR 215
+KAK S+ KG E T ++K + T QA + S+ A +SD D+ +SR
Sbjct: 167 PKKAKRSK--PDVPKGDEALSTALPAAEKPSTETVDQAEQSSEEVAP---VSDADWARSR 221
Query: 216 VKK--DWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEED 273
+ D E E +A DG++E E + N ++ D S +
Sbjct: 222 TSRLLGLLDDEEERPTAAQAHSTTDGDDEVETISRGN--------EVVVDEPASSIPTPP 273
Query: 274 ANGEIVDPGNPSSSSKDVQQEV---LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHI 330
A+ EI D +S+++ + EV +S RLFVRNLPY A +++L F +FGN+ EVHI
Sbjct: 274 AD-EIQDKDGDTSAAEPIDAEVEAVRKSMRLFVRNLPYDAQKEDLEAEFERFGNLEEVHI 332
Query: 331 VVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNST 390
+DK T +KG A++ Y+ P+S+ +A D FQGRLLH++P K+ + S
Sbjct: 333 ALDKKTGTAKGFAFIQYSDPDSSEQAFVDRDGQTFQGRLLHILPGTAKREDKLNDFDLS- 391
Query: 391 SQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL 450
K +++ E R+ EA+ +T WN+L+M D VV ++AR+ G++KS++LD ++D
Sbjct: 392 ----KLPLKKQNEIRRRREAASSTFNWNALYMNTDAVVSSVARRLGLAKSEVLDPTSSDA 447
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AV+ A ET +I ETK GV++ S ++ G T LVKN+P D S+ E
Sbjct: 448 AVKQAHAETHIIQETKSYFRQQGVDLDSFKKSHRGDT--------AILVKNIPADCSKDE 499
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L ++F + G + K ++P T+A+V F + AAF LAY+R K L+LE AP D+
Sbjct: 500 LKRLFEEQGDVHKFLMPPAGTIAIVEFANAAQCKAAFGTLAYRRVKSSMLFLEKAPKDLF 559
Query: 571 S--QSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDAD-IDPDRVESRSLFVKNLNFKT 627
+ +ST + + + V D K DAD P+ + +LFV+NLNF T
Sbjct: 560 TAKPASTDETGPEGVSKVSTADFK------------DADHTVPETTGTVTLFVRNLNFST 607
Query: 628 CDENLRKHFGEHIKEGRILS-VKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTI 686
+ L + F +G + + VK ++ K G +SMGFGF EF S + A + G
Sbjct: 608 TTKILSEAFTPL--DGFLSARVKTREDPKRG-TLSMGFGFAEFRSTKQAQAALETMDGYT 664
Query: 687 LDGHALILQLCHAKKD-EQVVKKAEKDK----SSTKLLVRNVAFEAQRK 730
L+GH L ++ H D + +KA+ K STK++++N+ FE +K
Sbjct: 665 LEGHKLQVRASHKGADAAEERRKADVAKRSAARSTKIIIKNLPFETTKK 713
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S + +KNL F+T +++R FG + G++ SV+V K + + GF F EF + +
Sbjct: 698 STKIIIKNLPFETTKKDVRALFGAY---GQLRSVRVPKKIDRA---ARGFAFAEFTTAKE 751
Query: 675 ATNVCRDLQGTILDGHALILQL 696
A + L+ T L G L+L
Sbjct: 752 AQSAMDALRDTHLLGRRLVLDF 773
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R FAF F T +EA+ A+
Sbjct: 699 TKIIIKNLPFETTKKDVRALFGAYGQLRSVRVPKKIDRAARGFAFAEFTTAKEAQSAMDA 758
Query: 61 FNKSYL 66
++L
Sbjct: 759 LRDTHL 764
>gi|303322875|ref|XP_003071429.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111131|gb|EER29284.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 813
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 233/759 (30%), Positives = 375/759 (49%), Gaps = 86/759 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D LR F+ + E+TDA ++ R+ F+GF+ A+ A+ Y
Sbjct: 4 TRVFVSGLPPTLNNDALRSHFASRFEVTDAHVI-----PKRRIGFVGFKDHNSAQNAVNY 58
Query: 61 FNKSYLDTCRISCEIARKV-GDPNM-PRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTI 118
FNK+++ +I+ E+A+ V P + R +R S ++ + S K+ L KRG
Sbjct: 59 FNKTFIRMSKIAVELAKPVDAAPEVNSRSKARNSSPRDADTSS--KSGSLKRKRG----- 111
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWAN--------------DTLIGLMADQ------K 158
E DDP+L EFL MQ K+K WA+ D+ + D+ K
Sbjct: 112 ---LEEDDPKLQEFLNTMQAPTKTKTWADTGTDLTTSLPFHNEDSKNAEIPDEMPTKRVK 168
Query: 159 AKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKK 218
A + ++ + +S++ +++ + N D+QAT + +A SD D+ +SR +
Sbjct: 169 AALEPDLPEESSKTSQSLSTGLRNRELN--NDAQATAEPTESAP---QSDADWLRSRTSR 223
Query: 219 DWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEI 278
DD++D G E N S+ D HS V E +
Sbjct: 224 LLGLL---------DDEEDAGRPVAETTNASPPVSHRIQHEPTTD--HSDVSAEKEDN-- 270
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
DP + + + + E+GRLF+RNLPY TE++L+ F++FG + E+HI D
Sbjct: 271 -DPAGSTDAIDANVKLIRETGRLFIRNLPYDTTEEDLQSEFARFGKLEELHIAFDSRHST 329
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLK 398
SKG AY + P+SA A + LD FQGRL+HV+PA KK+ E S K
Sbjct: 330 SKGFAYAQFFDPDSAIEAYKQLDGKDFQGRLMHVLPASSKKTYKINEYELS-----KLPL 384
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGE 458
+R+++ ++ +EA+ +T WNSL+M D V+ ++A + GV KS +LD ++D AV+ A E
Sbjct: 385 KRQQQIKRRAEAASSTFTWNSLYMNADAVMASVAERLGVPKSAILDPTSSDAAVKQAHAE 444
Query: 459 TQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKF 518
T +I ETK + GVN+ S ++ +R N LVKN + +L K+F +
Sbjct: 445 THIIQETKAYFSANGVNLDSFKQ--------RERGNTAILVKNFSFGVKAEDLKKLFDPY 496
Query: 519 GSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL-SQSSTSK 577
G + ++++P + T+A+V F P E AF+GLAY++ L+LE AP + + +T
Sbjct: 497 GQIMRLLMPPSGTIAIVEFSMPDECQKAFRGLAYRKLGDSILFLEKAPKGLFEGKPTTHI 556
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
Q AV + E + VES +L+V+NLNF T +L F
Sbjct: 557 AVQPQKAVAPAFSTSETFKAGEPE---------NEVESSTLYVRNLNFSTTTASLMDVF- 606
Query: 638 EHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL 696
+ + VK K KN G+ +SMGFGF+EF + A + G LD H L+++
Sbjct: 607 KPLDGFLSAQVKTKPDPKNPGERLSMGFGFVEFRTRAQAQAALAAMNGYKLDQHELVIRP 666
Query: 697 CHAKKD---EQVVKKAEKDKSS--TKLLVRNVAFEAQRK 730
H D +Q + A K ++ TK++++N+ F+A +K
Sbjct: 667 SHKATDSAEQQRRQDAAKKNAARRTKIIIKNLPFQATKK 705
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ ++++ FG + G++ SV+V K + GF F +F S A N
Sbjct: 693 IIIKNLPFQATKKDVQSLFGAY---GQLRSVRVPKKFDR---TARGFAFADFVSACEAEN 746
Query: 678 VCRDLQGTILDGHALILQLC--HAKKDEQVVKKAEK 711
L+ T L G L+L+ A E+ ++K EK
Sbjct: 747 AMDALRNTHLLGRKLVLEFVSEEAVDPEEEIQKIEK 782
>gi|358387674|gb|EHK25268.1| hypothetical protein TRIVIDRAFT_72404 [Trichoderma virens Gv29-8]
Length = 841
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 245/773 (31%), Positives = 389/773 (50%), Gaps = 88/773 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
+RI VK LP +TE R FS K EITD KL+ R+ ++G++T ++A A+K
Sbjct: 4 TRIFVKGLPPTITEAEFRKHFSAKNREITDLKLI-----PQRRIGYVGYKTPEDASGAVK 58
Query: 60 YFNKSYLDTCRISCEIARKVGDP----NMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEK 115
YFNKSY+ +IS E A+ + DP N S + + + +DE+ G K
Sbjct: 59 YFNKSYIRMSKISVEPAKPISDPALNKNQRLVHSDQQVASHQPLKQDEEG-------GSK 111
Query: 116 KTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDT-----LIGLMADQKAKVSENIS---- 166
K + + DP+L EFL+VM+ K + A++T + GL + V E S
Sbjct: 112 KRKREDLDESDPKLREFLRVMK-TGKEGVIADETNPDADMTGLATSGEPLVVEGESDDEY 170
Query: 167 -QAIKGGEK-SITLHVKSDKSNVITDS---QATEKSKNAAADELMSDMDYFKSRVKKDWS 221
Q K EK T ++ +S VI + ++ AA+E+++D VK +
Sbjct: 171 EQIPKRKEKLRKTESSEASRSLVINQKLPRETPDQGAQPAAEEVVAD------DVKPQEA 224
Query: 222 DSESEDDSAGDDDD------DDDGEEEEEEENDHNGDSNEECDSIIKDSIHSG------- 268
+ ++++ DDD + + ++ ++ E +++++D +
Sbjct: 225 EKLPQEEAGATDDDWLRSRTSRLLDLVDPDDLPRPTETAVEAETVVQDGGDNDDTPPSPR 284
Query: 269 -VGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSE 327
V +ED E D G ++ + D + + RLFVRNLPYT TE++L F KFG + E
Sbjct: 285 DVVDEDTPEEADDKGAENTGADDAVATITRTSRLFVRNLPYTTTEEDLHHEFGKFGTLQE 344
Query: 328 VHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELH 387
VH+ + R KG A VL+ +A A + LD FQGR+LH++PA KKS D+ +
Sbjct: 345 VHLPTNASGVR-KGFAMVLFEDSSNAVSAFQALDGVTFQGRILHIIPAEAKKSVDEFGM- 402
Query: 388 NSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA 447
+K +++ RK +EA+ + WNS++M D V ++A + GV+KS++LD +
Sbjct: 403 ------SKLPLKKQNMIRKKAEAATSVFNWNSMYMSQDAVNASVAARLGVAKSEVLDPTS 456
Query: 448 NDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSS 507
D V+ A+ ET VI ETK + GV++ + + KR LVKN PY +S
Sbjct: 457 ADAGVKQAIAETTVIQETKAFFASNGVDLDAFKSH--------KRGGTSILVKNFPYGTS 508
Query: 508 EGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPS 567
EL KMF + G + +V++P T T+A++ F + A AAF +AY+R K L+LE AP
Sbjct: 509 MEELRKMFEECGPVLRVLMPPTGTIAIIQFAQLNHAKAAFGKMAYRRVKDSVLFLEKAPV 568
Query: 568 DVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKT 627
D+ + + Q + VG+ L E ++ D + E+ SLFV+NLNF T
Sbjct: 569 DLFKKDAV----QDQASPVGDQRTGVQKLSVD-ELLSSGDKVEEPAETASLFVRNLNFAT 623
Query: 628 CDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQG 684
L + F +G +S +VK + K G+ +SMGFGF+EF S A + + G
Sbjct: 624 TTGKLAEAF--EPLDG-FVSARVKTKIDPKKPGQTLSMGFGFVEFRSKSQAQAALKTMDG 680
Query: 685 TILDGHALILQLCHAKKD-------EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+LDGHAL ++ H D E KKA + TK++++N+ F+A +K
Sbjct: 681 YVLDGHALGVKASHRGHDAAEERRREDAAKKAAAQR--TKIVIKNLPFQATKK 731
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 296 LESGRLFVRNLPYTATEDELREHFS-KFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+E+ R+FV+ LP T TE E R+HFS K ++++ ++ + I YV Y PE AS
Sbjct: 1 METTRIFVKGLPPTITEAEFRKHFSAKNREITDLKLIPQRR------IGYVGYKTPEDAS 54
Query: 355 RAIEVLDNSIFQGRLLHVMPAR 376
A++ + S + + V PA+
Sbjct: 55 GAVKYFNKSYIRMSKISVEPAK 76
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R FAF F T +EAE A+
Sbjct: 717 TKIVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADYTARGFAFADFVTPREAENALNA 776
Query: 61 FNKSYLDTCRISCEI 75
++L R+ +
Sbjct: 777 LKDTHLLGRRLVLDF 791
Score = 42.4 bits (98), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R F +G + V + D ++G A+ + P A A+
Sbjct: 718 KIVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADYT-ARGFAFADFVTPREAENALNA 776
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 777 LKDTHLLGRRL 787
>gi|302507734|ref|XP_003015828.1| hypothetical protein ARB_06140 [Arthroderma benhamiae CBS 112371]
gi|291179396|gb|EFE35183.1| hypothetical protein ARB_06140 [Arthroderma benhamiae CBS 112371]
Length = 826
Score = 311 bits (797), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 250/778 (32%), Positives = 395/778 (50%), Gaps = 110/778 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP +T D+LR+ F+Q+ E+TDA ++ +R+ F+GF+ AE A+KY
Sbjct: 4 TRVFVSGLPPSLTSDKLRNHFAQRFEVTDAHVI-----PNRRIGFVGFKGPDLAENAVKY 58
Query: 61 FNKSYLDTCRISCEIAR-----------------KVGDPNMPRPWSRYSLKKEKEVSEDE 103
FNK++++ +IS E+AR KV N +RY K ++ +
Sbjct: 59 FNKTFINMSKISVEMARPVSLEGLNGRKLTASFSKVDADNSDDLRARY----RKHLNAKK 114
Query: 104 KNPVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSE 163
P L KR + T E D +L E+L MQP KS+ WA+ I A Q+ K +
Sbjct: 115 DPPSLKRKRDTQDTEE------DEKLQEYLTAMQPPTKSRTWADSGAIP-TAHQEQKPAT 167
Query: 164 NISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKK---DW 220
+ ++ GE + +H + +TD TE+ A +D++ + ++ ++ V++ DW
Sbjct: 168 DAAKEPTEGEDDVEMH---NVETAVTDIPVTEQ--EAKSDDVDA-VNVNENPVQQNDDDW 221
Query: 221 SDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVD 280
S++ DD+D+ E + + N + I S + V E GE V
Sbjct: 222 LRSKTSRLLGLLDDEDEMAAETWKGKPLENATDQPPVPAKIP-STKAAVEE----GESVP 276
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSE------------- 327
P ++ + ++ +GRLF+RNLPY A+ED+L FS+FG + E
Sbjct: 277 EPPPDANIESIRL----TGRLFIRNLPYNASEDDLNATFSRFGKIEEEEYFSRCLFNLMT 332
Query: 328 VHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELH 387
V ++ KG AY+ Y ++A A + LD FQGRL+H++PA KK+ E
Sbjct: 333 VSFLIAA-INYCKGFAYIQYVESDAAIEAYKQLDGKDFQGRLMHILPASSKKTYKLDEFE 391
Query: 388 NSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA 447
S LK++++ +RKA EA+ +T +WNSL+M D V+ ++A + GVSKS LLD +
Sbjct: 392 ISKL----PLKKQQQIKRKA-EAASSTFSWNSLYMNTDAVMASVADRLGVSKSQLLDPTS 446
Query: 448 NDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSS 507
+D AV+ A ET VI ETK + GVN+ S ++ +R N L+KN Y S
Sbjct: 447 SDAAVKQAHAETHVIQETKAYFSANGVNIESFKQ--------RERGNTALLLKNFTYGVS 498
Query: 508 EGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPS 567
++ K+ FG L ++++P + T+A+V F P EA AFKGLAYKR LY+E AP
Sbjct: 499 SEDIRKLCEPFGQLTRLLMPPSGTIAIVEFAMPDEALRAFKGLAYKRIGDSILYVEKAPK 558
Query: 568 DVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQL--EGVTDADI----DPD-RVESRSLFV 620
++ G +LL Q++ +G + +D +P+ +ES +LFV
Sbjct: 559 NLFEG--------------GPPVTMPSLLNQKVVSQGFSTSDTFKADEPEAPMESATLFV 604
Query: 621 KNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATN 677
+NLNF T D L F +G +S +VK K G+ +SMGFGF+EF S A
Sbjct: 605 RNLNFITTDAGLSDLF--RPLDG-FISAQVKTRPDPKKPGERLSMGFGFVEFKSRAQAEA 661
Query: 678 VCRDLQGTILDGHALILQLCHAKKD--EQVVKKAEKDKSS---TKLLVRNVAFEAQRK 730
+ L G LD H L+++ H D EQ ++ K+S TK++++N+ F+A +K
Sbjct: 662 ALKALNGYKLDQHELVIKPSHKGMDAAEQRRREDNAKKASAKRTKIIIKNLPFQATKK 719
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ + F+ G++ ++ + D +R FAF F + +EAE A+
Sbjct: 705 TKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTARGFAFADFVSSREAENAMDA 764
Query: 61 FNKSYLDTCRISCE-IARKVGDP 82
++L R+ E ++ + DP
Sbjct: 765 LRNTHLLGRRLVLEFVSEEATDP 787
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E R+FV LP + T D+LR HF++ V++ H++ ++ I +V + P+ A
Sbjct: 1 MEGTRVFVSGLPPSLTSDKLRNHFAQRFEVTDAHVIPNRR------IGFVGFKGPDLAEN 54
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
A++ + + + V AR
Sbjct: 55 AVKYFNKTFINMSKISVEMAR 75
>gi|307111065|gb|EFN59300.1| hypothetical protein CHLNCDRAFT_7238, partial [Chlorella
variabilis]
Length = 556
Score = 311 bits (797), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 199/493 (40%), Positives = 280/493 (56%), Gaps = 57/493 (11%)
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
P+ + + + + ++GRLFVRNLPY+ATE EL+ F +G+VSEVH+V+D+ +K+SKG
Sbjct: 2 GPAVTEAEEEAHIADTGRLFVRNLPYSATEAELQALFEGYGDVSEVHLVLDRASKKSKGF 61
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ---------- 392
A V +A P+ A +A LD SIFQGRL+H++P + +
Sbjct: 62 ALVQFADPQDAVKAHAELDASIFQGRLIHILPGKRPPPPPEGAAAGEGEGEGEGGGGAKR 121
Query: 393 -GTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLA 451
T + K+++E +A+ +GN AWN+LFMR DTV + +A +GVSK++LLDREA D+A
Sbjct: 122 GATSSYKEQKEAALRAT--AGNRSAWNTLFMRADTVADAVAAHYGVSKAELLDREAGDMA 179
Query: 452 VRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGEL 511
VR+ALGETQVIAETK+AL AG +T G+ RS+ V +VKNLP+ +S EL
Sbjct: 180 VRMALGETQVIAETKRALGEAGGWRR--------RTRGVARSDRVLVVKNLPFTASLEEL 231
Query: 512 AKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS 571
+FG G+L +++LP T+TLALV +LE +A AFK LAYKRY+ VPLYLEWAP + S
Sbjct: 232 EALFGTIGALGRLVLPPTRTLALVEYLEAQDARRAFKALAYKRYQHVPLYLEWAPRTIFS 291
Query: 572 ----------------QSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVES 615
++ + A + + L GV +A + VES
Sbjct: 292 TPPPPRPAAGTPAAAPAAAAAAAAPAGKAGKAGKGSAGKAAGELLTGVAEA--QAEEVES 349
Query: 616 RSLFVKNLNFKTCDENLRKHFGEHIKEGRIL--SVKV-KKHLKNGKNVSMGFGFIEFDSV 672
S+FVKNL + T D L+ HF + +VKV K+ +GK +S GFGF+E S
Sbjct: 350 SSIFVKNLAWATEDAALKAHFDAAVSAAGGAVRAVKVAKRKGPDGKLLSAGFGFVECSSD 409
Query: 673 ETATNVCRDLQGTILDGHALILQLCHAKKDEQVV------KKAEKDKS---------STK 717
A + LQGT LDGH L+LQL ++ +KA+ S + K
Sbjct: 410 AAAKAAVKALQGTALDGHKLVLQLSTSRPGGAAGEAGAGKRKADGTGSTGGAAVLPDTCK 469
Query: 718 LLVRNVAFEAQRK 730
++VRNVAFEA RK
Sbjct: 470 VVVRNVAFEATRK 482
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
++ V+N+ T + F+ G + +L R DG R FAF+ F T+QEA A++
Sbjct: 469 KVVVRNVAFEATRKDIMGLFTPFGHVNSCRLPRKFDGTHRGFAFVDFATKQEARNAMEAV 528
Query: 62 NKSYLDTCRISCEIARKVG 80
++L R+ E A + G
Sbjct: 529 QGAHLYGRRLVLEWAEEEG 547
>gi|390468249|ref|XP_002753088.2| PREDICTED: probable RNA-binding protein 19 [Callithrix jacchus]
Length = 1066
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/488 (37%), Positives = 281/488 (57%), Gaps = 55/488 (11%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +S+K Q +L ESGRLFVRNLPYT+TE++L + FSK+G +SE+H
Sbjct: 481 GLPKNSAKSWQGRMLGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYP 540
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A+V + PE A +A +D +FQGR+LHV+P+ KK + + ++++
Sbjct: 541 IDSLTKKPKGFAFVTFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKKETSE----DASA 596
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ AS + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 597 LGSLSYKKKKEAQDKANSASSHN--WNTLFMGPNAVADAIAQKYSATKSQVFDHETKGSV 654
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 655 AVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAE 708
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L + FG+FGSL +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 709 LQETFGRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVGVF 768
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDP-----DRVESR--------- 616
S ++ K + DA + +A E G T D +P D ++
Sbjct: 769 SSAAPQK-KEPQDAPPEPTEKDQAEPETASNGETPEDENPTEEGADNCSAKMEEEEEEEE 827
Query: 617 ---------SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGF 666
+LF+KNLNF T +E L++ F K G + S + KK K G +SMGFGF
Sbjct: 828 EEEESLSGCTLFIKNLNFDTTEEKLKEVFS---KVGTVKSCSISKKKNKAGALLSMGFGF 884
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRN 722
+E+ E A + LQG I+DGH L +++ V K+ + ++++K+LVRN
Sbjct: 885 VEYRKPEQAQKALKQLQGHIVDGHKLEVRISERATKPAVTSARKKQIPRKQTTSKILVRN 944
Query: 723 VAFEAQRK 730
+ F+A +
Sbjct: 945 IPFQAHSR 952
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 190/396 (47%), Gaps = 55/396 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF+TE+EA++A+K+
Sbjct: 108 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKTEEEAQKALKH 167
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + ++ +D P + +KK
Sbjct: 168 FNKSFIDTSRITVEFCKSFGDPTKPRAWSKHAQKPSQPEQPPKDSATPEIKKDEKKKKVA 227
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
+EK+ E D + EFL V Q RV++ W ND L + K+K + +
Sbjct: 228 GQLEKLKE--DTEFQEFLSVHQRRVQAATWVNDGLDVKPSRGKSKPASDY---------- 275
Query: 176 ITLHVKSDKSNVITDSQATEK-------SKNAAADELMSDMDYFKSRVKKDWSDSESEDD 228
L+ SD + A E + AA + +SDMDY KS++ K S S SE++
Sbjct: 276 --LNFDSDSGQESEEEGAGEDLEEEANLERKAAVQKELSDMDYLKSKMVKSGSSSSSEEE 333
Query: 229 SAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANGE 277
+ D+ D E EEE + + +E D GVG+E D E
Sbjct: 334 ESEDEAVHCDEGSEVEEEGSSSTQALQERDG-------KGVGQEQGMPAGKKRPLDTRAE 386
Query: 278 IVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTK 337
P N Q+E + +R P+ TE + E + V+ + IV +
Sbjct: 387 TEKPAN--------QKEPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVA-IRIVRNAHGN 437
Query: 338 RSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
++ G +V ++ E +A++ + GR + V
Sbjct: 438 KT-GYIFVDFSNEEEVKKALKC-NREYMGGRYIEVF 471
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 17/119 (14%)
Query: 271 EEDANGEIVDPGNPSSSSKD--------------VQQEVLESGRLFVRNLPYTATEDELR 316
E +NGE + NP+ D ++E L LF++NL + TE++L+
Sbjct: 794 ETASNGETPEDENPTEEGADNCSAKMEEEEEEEEEEEESLSGCTLFIKNLNFDTTEEKLK 853
Query: 317 EHFSKFGNVSEVHIVVDKDTK---RSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
E FSK G V I K+ S G +V Y PE A +A++ L I G L V
Sbjct: 854 EVFSKVGTVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKALKQLQGHIVDGHKLEV 912
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP T V FL +A
Sbjct: 934 KQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDA 993
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 994 KRAFNALCHSTHLYGRRLVLEWADSEVTLQA 1024
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 938 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 997
>gi|320033511|gb|EFW15459.1| multiple RNA-binding domain-containing protein 1 [Coccidioides
posadasii str. Silveira]
Length = 813
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 233/759 (30%), Positives = 375/759 (49%), Gaps = 86/759 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D LR F+ + E+TDA ++ R+ F+GF+ A+ A+ Y
Sbjct: 4 TRVFVSGLPPTLNNDALRSHFASRFEVTDAHVI-----PKRRIGFVGFKDHNSAQNAVNY 58
Query: 61 FNKSYLDTCRISCEIARKV-GDPNM-PRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTI 118
FNK+++ +I+ E+A+ V P + R +R S ++ + S K+ L KRG
Sbjct: 59 FNKTFIRMSKIAVELAKPVDAAPEVNSRSKARNSSPRDADTSS--KSGSLKRKRG----- 111
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWAN--------------DTLIGLMADQ------K 158
E DDP+L EFL MQ K+K WA+ D+ + D+ K
Sbjct: 112 ---LEEDDPKLQEFLNTMQAPTKTKTWADTGTDLTTSLPFHNEDSKNAEIPDEMPTKRVK 168
Query: 159 AKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKK 218
A + ++ + +S++ +++ + N D+QAT + +A SD D+ +SR +
Sbjct: 169 AALEPDLPEESSKTSQSLSTGLRNRELN--NDAQATAEPTESAP---QSDADWLRSRTSR 223
Query: 219 DWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEI 278
DD++D G E N S+ D HS V E +
Sbjct: 224 LLGLL---------DDEEDAGRPVAETTNASPPVSHRIQHEPTTD--HSDVSAEKEDN-- 270
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
DP + + + + E+GRLF+RNLPY TE++L+ F++FG + E+HI D
Sbjct: 271 -DPAGSTDAIDANVKLIRETGRLFIRNLPYDTTEEDLQSEFARFGKLEELHIAFDSRHST 329
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLK 398
SKG AY + P+SA A + LD FQGRL+HV+PA KK+ E S K
Sbjct: 330 SKGFAYAQFFDPDSAIEAYKQLDGKDFQGRLMHVLPASSKKTYKINEYELS-----KLPL 384
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGE 458
+R+++ ++ +EA+ +T WNSL+M D V+ ++A + GV KS +LD ++D AV+ A E
Sbjct: 385 KRQQQIKRRAEAASSTFTWNSLYMNADAVMASVAERLGVPKSAILDPTSSDAAVKQAHAE 444
Query: 459 TQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKF 518
T +I ETK + GVN+ S ++ +R N LVKN + +L K+F +
Sbjct: 445 THIIQETKAYFSANGVNLDSFKQ--------RERGNTAILVKNFSFGVKAEDLKKLFDPY 496
Query: 519 GSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL-SQSSTSK 577
G + ++++P + T+A+V F P E AF+GLAY++ L+LE AP + + +T
Sbjct: 497 GQIMRLLMPPSGTIAIVEFSMPDECQKAFRGLAYRKLGDSILFLEKAPKGLFEGKPTTHI 556
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
Q AV + E + VES +L+V+NLNF T +L F
Sbjct: 557 AVQPQKAVAPAFSTSETFKAGEPE---------NEVESSTLYVRNLNFSTTTASLMDVF- 606
Query: 638 EHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL 696
+ + VK K KN G+ +SMGFGF+EF + A + G LD H L+++
Sbjct: 607 KPLDGFLSAQVKTKPDPKNPGERLSMGFGFVEFRTRAQAQAALAAMNGYKLDQHELVIRP 666
Query: 697 CHAKKD---EQVVKKAEKDKSS--TKLLVRNVAFEAQRK 730
H D +Q + A K ++ TK++++N+ F+A +K
Sbjct: 667 SHKATDSAEQQRRQDAAKKNAARRTKIIIKNLPFQATKK 705
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ ++++ FG + G++ SV+V K + GF F +F S A N
Sbjct: 693 IIIKNLPFQATKKDVQSLFGAY---GQLRSVRVPKKFDR---TARGFAFADFVSAREAEN 746
Query: 678 VCRDLQGTILDGHALILQLC--HAKKDEQVVKKAEK 711
L+ T L G L+L+ A E+ ++K EK
Sbjct: 747 AMDALRNTHLLGRKLVLEFVSEEAVDPEEEIQKIEK 782
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ ++ F G++ ++ + D +R FAF F + +EAE A+
Sbjct: 691 TKIIIKNLPFQATKKDVQSLFGAYGQLRSVRVPKKFDRTARGFAFADFVSAREAENAMDA 750
Query: 61 FNKSYLDTCRISCE-IARKVGDP 82
++L ++ E ++ + DP
Sbjct: 751 LRNTHLLGRKLVLEFVSEEAVDP 773
>gi|346321688|gb|EGX91287.1| pre-rRNA processing protein Mrd1, putative [Cordyceps militaris
CM01]
Length = 849
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 248/787 (31%), Positives = 384/787 (48%), Gaps = 107/787 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI V LP +TE R FS E+TD KLM R+ ++G+++ ++A +A+K
Sbjct: 4 SRIFVNGLPTSLTEAEFRKHFSAGNREVTDVKLM-----AQRRIGYVGYKSPEDAAKAVK 58
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIE 119
YFNK+Y+ +I+ E AR + D W++ ++ +E+ + + EK +
Sbjct: 59 YFNKTYVRMSKITVEPARAISDST----WTKANVATRAVATEEGSRALPSTATSEKGGTK 114
Query: 120 KVTEND----DPQLLEFLQVMQPRVKSKMWANDTLI---GLMADQ-KAKVSEN------- 164
K D DP+L E+LQVM + + + A++T + G +A Q A V E
Sbjct: 115 KRKREDLDPSDPKLQEYLQVMG-KGRESLVADETAVESRGPIAPQGSALVPEGESDDEYV 173
Query: 165 --------------------ISQAIKGGE----KSITLHVKSDKSNVITDSQATEKSK-N 199
++Q E K + + S A E + N
Sbjct: 174 EVPSRKEKLRKVDHATGETGVAQVTPAKESTSRKEAVGAPAGGVAGALPGSTAPESAPAN 233
Query: 200 AAADELM--SDMDYFKSRVKK--DWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNE 255
AAD M +D D+ +SR + D D + +A + + D +E ND
Sbjct: 234 QAADVAMAATDDDWLRSRTSRLLDLVDPDDISHAAPIEKAEGDSSAGQEVGND------- 286
Query: 256 ECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVL-ESGRLFVRNLPYTATEDE 314
K++ HS EED + DP P KD E + ++ RLFVRNLPY+ATED+
Sbjct: 287 ------KEAPHS---EEDGTRDGQDPLPPQGQDKDSAAEAIAKTSRLFVRNLPYSATEDD 337
Query: 315 LREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMP 374
LRE F KFG V EVH+ ++ SKG A +L+ A A + LD S FQGR++H++P
Sbjct: 338 LREEFEKFGGVDEVHLPINAQGT-SKGFAMMLFTKASDAVAAFQALDGSTFQGRIIHIIP 396
Query: 375 ARHKKSSDKQELHNSTSQGTKTLKQRREEE-RKASEASGNTKAWNSLFMRPDTVVENIAR 433
A D + H +L +++ RK EA+ T WNSL+M D V ++A
Sbjct: 397 A------DAKREHGVDDFSMSSLPLKKQNLIRKKKEAASTTFNWNSLYMSQDAVNSSVAA 450
Query: 434 KHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRS 493
+ GVSKSD+LD + D AV+ A+ ET VI ETK V++ + + KR
Sbjct: 451 RLGVSKSDVLDPTSADAAVKQAIAETSVIQETKAYFAANAVDLDAFKSH--------KRG 502
Query: 494 NHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYK 553
+ LVKN PY ++ EL KMF +FG + +V++P T T+A+V F + A AF LAY+
Sbjct: 503 DLAILVKNFPYGTTMEELRKMFEEFGPVLRVLMPPTGTIAIVQFAQANHAKTAFGKLAYR 562
Query: 554 RYKGVPLYLEWAPSDVL-SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR 612
R K L+LE AP D+ S++ + N G + + L G A + +
Sbjct: 563 RIKDSVLFLEKAPKDLFTSEAPAVPVAKANSQPTG---TTKLSVSDLLTGGDQA--EEEE 617
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEF 669
VE+ SLF++NLNF T L + F +G +S +VK K G+ +SMGFGF EF
Sbjct: 618 VETTSLFIRNLNFATTTSRLAEVF--KALDG-FVSARVKTKTDPKKPGQVLSMGFGFAEF 674
Query: 670 DSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSS------TKLLVRNV 723
+ A + + G +LD HAL ++ H K ++ ++ ++DK+ TK++++N+
Sbjct: 675 RTKAQAVAALKVMDGYVLDDHALGVKASH-KGNDAAEERRKQDKAKKVAATRTKIVIKNL 733
Query: 724 AFEAQRK 730
F+ ++
Sbjct: 734 PFQVSKQ 740
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGN--VSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
+ + R+FV LP + TE E R+HFS GN V++V ++ + I YV Y PE A
Sbjct: 1 MATSRIFVNGLPTSLTEAEFRKHFSA-GNREVTDVKLMAQRR------IGYVGYKSPEDA 53
Query: 354 SRAIEVLDNSIFQGRLLHVMPAR 376
++A++ + + + + V PAR
Sbjct: 54 AKAVKYFNKTYVRMSKITVEPAR 76
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP V++ +R F G++ ++ + D SR FAF F T +EAE A+
Sbjct: 726 TKIVIKNLPFQVSKQDIRTLFGTYGQLRSVRVPKKADYTSRGFAFADFVTPREAENALNA 785
Query: 61 FNKSYLDTCRISCEI 75
++L R+ +
Sbjct: 786 LRDTHLLGRRLVLDF 800
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V K S GF F +F + A N
Sbjct: 728 IVIKNLPFQVSKQDIRTLFGTY---GQLRSVRVPK---KADYTSRGFAFADFVTPREAEN 781
Query: 678 VCRDLQGTILDGHALIL 694
L+ T L G L+L
Sbjct: 782 ALNALRDTHLLGRRLVL 798
>gi|358372076|dbj|GAA88681.1| pre-rRNA processing protein Mrd1 [Aspergillus kawachii IFO 4308]
Length = 825
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 238/776 (30%), Positives = 395/776 (50%), Gaps = 109/776 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP +++D+LR F+ + ++TDA ++ R+ F+GF+ + A++A+ Y
Sbjct: 4 TRVFVSGLPPTLSDDQLRKHFATRFQVTDAHVL-----PKRRIGFVGFKNHEAAQQAVSY 58
Query: 61 FNKSYLDTCRISCEIARKV-GDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKR-GEKKTI 118
FNK+Y+ +IS +IA+ + +P +R + K +K + D + L KR GE
Sbjct: 59 FNKTYMKMSKISVDIAKPIDAEP------TRKAGKHDKISAGDAADTSLKRKRDGE---- 108
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWANDTL-----IGLMADQKAKVSENISQAIKGGE 173
+ D +L E+L VMQ K+K WAND + + A+Q A+V E +
Sbjct: 109 ---SAPQDARLQEYLSVMQHSSKTKTWANDDVPKPPELDSPAEQPAEVEEQPQELTYAQR 165
Query: 174 KSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMD---YFKSRVKKDWSDSESEDDSA 230
K L D+S + ++ + + + ++ D ++ ++D + +E+E +
Sbjct: 166 KKAKLGDDHDRSQ---EMHTADREAHGSPEPMVVDHSGEGNAEAPAEQDDTVAETEAPAV 222
Query: 231 GDDD------DDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNP 284
D D G +EEE+ D + + ++ + +++ G DA +IV P
Sbjct: 223 SDADWLRSKTSRLLGLLDEEEQADFDAAAQQKEPAAPEEAEDPGADSRDA--QIVAPA-- 278
Query: 285 SSSSKDVQQEVLE--------SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT 336
++ +K VQ+ ++ S RLFVRNL Y +E +L F+ FG + E+H+ D
Sbjct: 279 ATEAKTVQEPQVDTNIDGIRLSARLFVRNLAYDTSESDLEPLFAPFGRIEEIHVAFDTRV 338
Query: 337 KRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGT 394
SKG AY+ Y ++A A + LD FQGRL+H++PA KK+ D EL
Sbjct: 339 NTSKGFAYIQYLDADAAVEAYKNLDGKHFQGRLMHILPAAAKKTYKIDDAEL-------A 391
Query: 395 KTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRI 454
K +++++ +K +AS +T +WNSL+M D V+ ++A + GVSK+DLLD ++D AV+
Sbjct: 392 KLPLKKQKQIKKKMDASSSTFSWNSLYMNTDAVMSSVAERLGVSKADLLDPTSSDAAVKQ 451
Query: 455 ALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKM 514
A ET VI ETK + GVN+ + ++ +R N LVKN Y EL KM
Sbjct: 452 AHAETHVIQETKAYFSANGVNIEAFKQ--------RERGNTAILVKNFSYGVKTDELRKM 503
Query: 515 FGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
F FG + ++++P + T+A+V F P EA AFKGLAY++ L+LE AP D+ ++
Sbjct: 504 FEPFGQITRLLMPPSGTIAIVEFSRPDEAQKAFKGLAYRKLGDSILFLEKAPKDLFDAAA 563
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQL--EGVTDAD------IDPDRVESRSLFVKNLNFK 626
++A +E + +G + AD +D D + +LFVKNLNF
Sbjct: 564 VP---------------QKATIETKAVSQGFSTADTFAADEVD-DLTPTTTLFVKNLNFA 607
Query: 627 TCDENLRKHFGEHIKEGRILSVKVK-----KHLKNGKNVSMGFGFIEFDSVETATNVCRD 681
T ++ F +G +S K+K KH G+ +SMGFGF+EF S A +
Sbjct: 608 TTTQSFVDLF--RPLDG-FVSAKIKTKPDPKH--PGQTLSMGFGFVEFRSKAQAQSALAA 662
Query: 682 LQGTILDGHALILQLCHAKKD-------EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ G LD H L++++ H D E KK + TK++++N+ F+A +K
Sbjct: 663 MNGYKLDQHELVVRVSHRGMDAAEERRREDTAKKVAARR--TKIIIKNLPFQATKK 716
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V K + GFGF +F S A N
Sbjct: 704 IIIKNLPFQATKKDVRSLFGAY---GQLRSVRVPKKFDRS---ARGFGFADFVSAREAEN 757
Query: 678 VCRDLQGTILDGHALILQLCH 698
L+ T L G L+L+ +
Sbjct: 758 AMDALKNTHLLGRKLVLEFAN 778
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 22/138 (15%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+FV LP T ++D+LR+HF+ V++ H++ KR I +V + E+A +
Sbjct: 1 MESTRVFVSGLPPTLSDDQLRKHFATRFQVTDAHVL----PKRR--IGFVGFKNHEAAQQ 54
Query: 356 AIEVLDNSIFQGRLLHVMPARH--KKSSDKQELHNSTSQG---TKTLKQRREEERKASEA 410
A+ + + + + V A+ + + K H+ S G +LK++R+ E +A
Sbjct: 55 AVSYFNKTYMKMSKISVDIAKPIDAEPTRKAGKHDKISAGDAADTSLKRKRDGESAPQDA 114
Query: 411 -----------SGNTKAW 417
S TK W
Sbjct: 115 RLQEYLSVMQHSSKTKTW 132
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R F F F + +EAE A+
Sbjct: 702 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMDA 761
Query: 61 FNKSYLDTCRISCEIA 76
++L ++ E A
Sbjct: 762 LKNTHLLGRKLVLEFA 777
>gi|13279134|gb|AAH04289.1| RBM19 protein [Homo sapiens]
gi|13544005|gb|AAH06137.1| RBM19 protein [Homo sapiens]
gi|190689379|gb|ACE86464.1| RNA binding motif protein 19 protein [synthetic construct]
gi|190690741|gb|ACE87145.1| RNA binding motif protein 19 protein [synthetic construct]
Length = 960
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/488 (37%), Positives = 279/488 (57%), Gaps = 55/488 (11%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +++K Q +L ESGRLFVRNLPYT+TE++L + FSK+G +SE+H
Sbjct: 375 GAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYP 434
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A++ + PE A +A +D +FQGR+LHV+P+ KK + + ++++
Sbjct: 435 IDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKKEASE----DASA 490
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ AS + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 491 LGSSSYKKKKEAQDKANSASSHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSV 548
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 549 AVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAE 602
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L + FG+FGSL +V+LP T A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 603 LQETFGRFGSLGRVLLPEGGTTAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVGVF 662
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR------------------ 612
S ++ K + D + A E +G T D +P
Sbjct: 663 SSAAPQK-KKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEEE 721
Query: 613 -----VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGF 666
+ +LF+KNLNF T +E L++ F K G + S + KK K G +SMGFGF
Sbjct: 722 EEEESLPGCTLFIKNLNFDTTEEKLKEVFS---KVGTVKSCSISKKKNKAGVLLSMGFGF 778
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRN 722
+E+ E A + LQG ++DGH L +++ V K+ + ++++K+LVRN
Sbjct: 779 VEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRN 838
Query: 723 VAFEAQRK 730
+ F+A +
Sbjct: 839 IPFQAHSR 846
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 196/391 (50%), Gaps = 45/391 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A K+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P + +KK
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVA 121
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKGGEK 174
+EK+ E D + EFL V Q R ++ WAND L + K+K S+ ++ G++
Sbjct: 122 GQLEKLKE--DTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQE 179
Query: 175 SITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSR-VKKDWSDSESEDDSAGDD 233
S + + + + +A+ + K A EL SDMDY KS+ VK S S E++S +
Sbjct: 180 S-----EEEGAGEDLEEEASLEPKAAVQKEL-SDMDYLKSKMVKAGSSSSSEEEESEDEA 233
Query: 234 DDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANGEIVDPG 282
D+G E EEE++ ++++ G G+E +A E P
Sbjct: 234 VHCDEGSEAEEEDSS--------ATPVLQERDSRGAGQEQGMPAGKKRPPEARAETEKPA 285
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
N Q+E + +R P+ TE + E + V+ + IV + ++ G
Sbjct: 286 N--------QKEPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVA-IRIVRNAHGNKT-GY 335
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
+V ++ E +A++ + GR + V
Sbjct: 336 IFVDFSNEEEVKQALKC-NREYMGGRYIEVF 365
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 130/336 (38%), Gaps = 69/336 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP EL+E F +FG++ V + T A V + P A +A L
Sbjct: 589 ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGTT------AIVEFLEPLEARKAFRHL 642
Query: 361 DNSIFQGRLLHVMPAR----HKKSSDKQELHNSTSQG---------TKTLKQRREEERKA 407
S F L++ A + K++L ++ S+ T + E+E
Sbjct: 643 AYSKFHHVPLYLEWAPVGVFSSAAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPT 702
Query: 408 SEASGNTKA-----------------WNSLFMRP---DTVVENIAR---KHGVSKSDLLD 444
E + N+ A +LF++ DT E + K G KS +
Sbjct: 703 EEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSIS 762
Query: 445 REANDLAVRIALG----ETQVIAETKKALTNAGVNVS-------SLEEFSAGKTDGLKRS 493
++ N V +++G E + + +KAL +V + E + L R
Sbjct: 763 KKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARK 822
Query: 494 NHV--------FLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFL 538
V LV+N+P+ + E+ ++F FG L V LP T V FL
Sbjct: 823 KQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFL 882
Query: 539 EPVEAAAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
+A AF L + + G L LEWA S+V Q+
Sbjct: 883 TKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQA 918
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
>gi|168278697|dbj|BAG11228.1| RNA binding motif protein 19 [synthetic construct]
Length = 960
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/488 (37%), Positives = 279/488 (57%), Gaps = 55/488 (11%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +++K Q +L ESGRLFVRNLPYT+TE++L + FSK+G +SE+H
Sbjct: 375 GAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYP 434
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A++ + PE A +A +D +FQGR+LHV+P+ KK + + ++++
Sbjct: 435 IDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKKEASE----DASA 490
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ AS + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 491 LGSSSYKKKKEAQDKANSASSHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSV 548
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 549 AVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAE 602
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L + FG+FGSL +V+LP T A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 603 LQETFGRFGSLGRVLLPEGGTTAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVGVF 662
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR------------------ 612
S ++ K + D + A E +G T D +P
Sbjct: 663 SSAAPQK-KKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEEE 721
Query: 613 -----VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGF 666
+ +LF+KNLNF T +E L++ F K G + S + KK K G +SMGFGF
Sbjct: 722 EEEESLPGCTLFIKNLNFDTTEEKLKEVFS---KVGTVKSCSISKKKNKAGVLLSMGFGF 778
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRN 722
+E+ E A + LQG ++DGH L +++ V K+ + ++++K+LVRN
Sbjct: 779 VEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRN 838
Query: 723 VAFEAQRK 730
+ F+A +
Sbjct: 839 IPFQAHSR 846
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 196/391 (50%), Gaps = 45/391 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A K+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P + +KK
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVA 121
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKGGEK 174
+EK+ E D + EFL V + R ++ WAND L + K+K S+ ++ G++
Sbjct: 122 GQLEKLKE--DTEFQEFLSVHRRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQE 179
Query: 175 SITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSR-VKKDWSDSESEDDSAGDD 233
S + + + + +A+ + K A EL SDMDY KS+ VK S S E++S +
Sbjct: 180 S-----EEEGAGEDLEEEASLEPKAAVQKEL-SDMDYLKSKMVKAGSSSSSEEEESEDEA 233
Query: 234 DDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANGEIVDPG 282
D+G E EEE++ ++++ G G+E +A E P
Sbjct: 234 VHCDEGSEAEEEDSS--------ATPVLQERDSRGAGQEQGMPAGKKRPPEARAETEKPA 285
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
N Q+E + +R P+ TE + E + V+ + IV + ++ G
Sbjct: 286 N--------QKEPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVA-IRIVRNAHGNKT-GY 335
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
+V ++ E +A++ + GR + V
Sbjct: 336 IFVDFSNEEEVKQALKC-NREYMGGRYIEVF 365
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 130/336 (38%), Gaps = 69/336 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP EL+E F +FG++ V + T A V + P A +A L
Sbjct: 589 ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGTT------AIVEFLEPLEARKAFRHL 642
Query: 361 DNSIFQGRLLHVMPAR----HKKSSDKQELHNSTSQG---------TKTLKQRREEERKA 407
S F L++ A + K++L ++ S+ T + E+E
Sbjct: 643 AYSKFHHVPLYLEWAPVGVFSSAAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPT 702
Query: 408 SEASGNTKA-----------------WNSLFMRP---DTVVENIAR---KHGVSKSDLLD 444
E + N+ A +LF++ DT E + K G KS +
Sbjct: 703 EEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSIS 762
Query: 445 REANDLAVRIALG----ETQVIAETKKALTNAGVNVS-------SLEEFSAGKTDGLKRS 493
++ N V +++G E + + +KAL +V + E + L R
Sbjct: 763 KKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARK 822
Query: 494 NHV--------FLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFL 538
V LV+N+P+ + E+ ++F FG L V LP T V FL
Sbjct: 823 KQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFL 882
Query: 539 EPVEAAAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
+A AF L + + G L LEWA S+V Q+
Sbjct: 883 TKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQA 918
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
>gi|40788328|dbj|BAA31657.2| KIAA0682 protein [Homo sapiens]
Length = 973
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/488 (37%), Positives = 279/488 (57%), Gaps = 55/488 (11%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +++K Q +L ESGRLFVRNLPYT+TE++L + FSK+G +SE+H
Sbjct: 388 GAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYP 447
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A++ + PE A +A +D +FQGR+LHV+P+ KK + + ++++
Sbjct: 448 IDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKKEASE----DASA 503
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ AS + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 504 LGSSSYKKKKEAQDKANSASSHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSV 561
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 562 AVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAE 615
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L + FG+FGSL +V+LP T A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 616 LQETFGRFGSLGRVLLPEGGTTAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVGVF 675
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR------------------ 612
S ++ K + D + A E +G T D +P
Sbjct: 676 SSAAPQK-KKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEEE 734
Query: 613 -----VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGF 666
+ +LF+KNLNF T +E L++ F K G + S + KK K G +SMGFGF
Sbjct: 735 EEEESLPGCTLFIKNLNFDTTEEKLKEVFS---KVGTVKSCSISKKKNKAGVLLSMGFGF 791
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRN 722
+E+ E A + LQG ++DGH L +++ V K+ + ++++K+LVRN
Sbjct: 792 VEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRN 851
Query: 723 VAFEAQRK 730
+ F+A +
Sbjct: 852 IPFQAHSR 859
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 196/391 (50%), Gaps = 45/391 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A K+
Sbjct: 15 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKH 74
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P + +KK
Sbjct: 75 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVA 134
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKGGEK 174
+EK+ E D + EFL V + R ++ WAND L + K+K S+ ++ G++
Sbjct: 135 GQLEKLKE--DTEFQEFLSVHRRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQE 192
Query: 175 SITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSR-VKKDWSDSESEDDSAGDD 233
S + + + + +A+ + K A EL SDMDY KS+ VK S S E++S +
Sbjct: 193 S-----EEEGAGEDLEEEASLEPKAAVQKEL-SDMDYLKSKMVKAGSSSSSEEEESEDEA 246
Query: 234 DDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANGEIVDPG 282
D+G E EEE++ ++++ G G+E +A E P
Sbjct: 247 VHCDEGSEAEEEDSS--------ATPVLQERDSRGAGQEQGMPAGKKRPPEARAETEKPA 298
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
N Q+E + +R P+ TE + E + V+ + IV + ++ G
Sbjct: 299 N--------QKEPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVA-IRIVRNAHGNKT-GY 348
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
+V ++ E +A++ + GR + V
Sbjct: 349 IFVDFSNEEEVKQALKC-NREYMGGRYIEVF 378
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 130/336 (38%), Gaps = 69/336 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP EL+E F +FG++ V + T A V + P A +A L
Sbjct: 602 ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGTT------AIVEFLEPLEARKAFRHL 655
Query: 361 DNSIFQGRLLHVMPAR----HKKSSDKQELHNSTSQG---------TKTLKQRREEERKA 407
S F L++ A + K++L ++ S+ T + E+E
Sbjct: 656 AYSKFHHVPLYLEWAPVGVFSSAAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPT 715
Query: 408 SEASGNTKA-----------------WNSLFMRP---DTVVENIAR---KHGVSKSDLLD 444
E + N+ A +LF++ DT E + K G KS +
Sbjct: 716 EEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSIS 775
Query: 445 REANDLAVRIALG----ETQVIAETKKALTNAGVNVS-------SLEEFSAGKTDGLKRS 493
++ N V +++G E + + +KAL +V + E + L R
Sbjct: 776 KKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARK 835
Query: 494 NHV--------FLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFL 538
V LV+N+P+ + E+ ++F FG L V LP T V FL
Sbjct: 836 KQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFL 895
Query: 539 EPVEAAAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
+A AF L + + G L LEWA S+V Q+
Sbjct: 896 TKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQA 931
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 845 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 904
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 905 NALCHSTHLYGRRLVLEWA 923
>gi|302660785|ref|XP_003022068.1| hypothetical protein TRV_03809 [Trichophyton verrucosum HKI 0517]
gi|291185995|gb|EFE41450.1| hypothetical protein TRV_03809 [Trichophyton verrucosum HKI 0517]
Length = 968
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 248/774 (32%), Positives = 396/774 (51%), Gaps = 102/774 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP +T D+LR+ F+Q+ E+TDA ++ +R+ F+GF+ AE A+KY
Sbjct: 146 TRVFVSGLPPSLTSDKLRNHFAQRFEVTDAHVI-----PNRRIGFVGFKGPDLAENAVKY 200
Query: 61 FNKSYLDTCRISCEIARKVG--DPNMPRPWSRYS-----------LKKEKEVSEDEKNPV 107
FNK++++ +IS E+AR V N + + +S + K ++ + P
Sbjct: 201 FNKTFINMSKISVEMARPVSLEGLNGRKLTASFSKVDADNSDDLRARYRKHLNAKKDPPS 260
Query: 108 LAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQ 167
L KR + T E D +L E+L MQP KS+ WA+ I A Q+ K + + ++
Sbjct: 261 LKRKRDTQDTEE------DEKLQEYLTAMQPPTKSRTWADSGAIP-TAHQEQKPATDAAK 313
Query: 168 AIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKK---DWSDSE 224
GE + +H + +TD TE+ A +D++ + ++ ++ V++ DW S+
Sbjct: 314 EPTEGEDDVEMH---NVETAVTDIPVTEQ--EAKSDDVDA-VNVNENPVQQNDDDWLRSK 367
Query: 225 SEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNP 284
+ DD+D+ E + + N + I S + V E GE V P
Sbjct: 368 TSRLLGLLDDEDEMAAETWKGKPLENATDQPPVPAKIP-STKAAVEE----GESVPEPPP 422
Query: 285 SSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSE-------------VHIV 331
++ + ++ +GRLF+RNLPY A+ED+L FS+FG + E V +
Sbjct: 423 DANIESIRL----TGRLFIRNLPYNASEDDLNATFSRFGKIEEEEYFSRCLFNLMTVSFL 478
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+ KG AY+ Y ++A A + LD FQGRL+H++PA KK+ E S
Sbjct: 479 IAA-INYCKGFAYIQYVESDAAIEAYKQLDGKDFQGRLMHILPASSKKTYKLDEFEISKL 537
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLA 451
LK++++ +RKA EA+ +T +WNSL+M D V+ ++A + GVSKS LLD ++D A
Sbjct: 538 ----PLKKQQQIKRKA-EAASSTFSWNSLYMNTDAVMASVADRLGVSKSQLLDPTSSDAA 592
Query: 452 VRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGEL 511
V+ A ET VI ETK + GVN+ S ++ +R N L+KN Y S ++
Sbjct: 593 VKQAHAETHVIQETKAYFSANGVNIESFKQ--------RERGNTALLLKNFTYGVSSEDI 644
Query: 512 AKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS 571
K+ FG L ++++P + T+A+V F P EA AFKGLAYKR LY+E AP ++
Sbjct: 645 RKLCEPFGQLTRLLMPPSGTIAIVEFAMPDEALRAFKGLAYKRIGDSILYVEKAPKNLFE 704
Query: 572 QSSTSKGNQKNDAVVGEHDAKRALLEQQL--EGVTDADI----DPD-RVESRSLFVKNLN 624
G +LL Q++ +G + +D +P+ +ES +LFV+NLN
Sbjct: 705 G--------------GPPVTMPSLLNQKVVSQGFSTSDTFKADEPEAPMESATLFVRNLN 750
Query: 625 FKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRD 681
F T D L F +G +S +VK K G+ +SMGFGF+EF S A +
Sbjct: 751 FITTDAGLSDLF--RPLDG-FISAQVKTRPDPKKPGERLSMGFGFVEFKSRAQAEAALKA 807
Query: 682 LQGTILDGHALILQLCHAKKD--EQVVKKAEKDKSS---TKLLVRNVAFEAQRK 730
L G LD H L+++ H D EQ ++ K+S TK++++N+ F+A +K
Sbjct: 808 LNGYKLDQHELVIKPSHKGMDAAEQRRREDNAKKASAKRTKIIIKNLPFQATKK 861
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 286 SSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYV 345
S+ + ++ +E R+FV LP + T D+LR HF++ V++ H++ ++ I +V
Sbjct: 133 STCQPPRENKMEGTRVFVSGLPPSLTSDKLRNHFAQRFEVTDAHVIPNRR------IGFV 186
Query: 346 LYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
+ P+ A A++ + + + V AR
Sbjct: 187 GFKGPDLAENAVKYFNKTFINMSKISVEMAR 217
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ + F+ G++ ++ + D +R FAF F + +EAE A+
Sbjct: 847 TKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTARGFAFADFVSSREAENAMDA 906
Query: 61 FNKSYLDTCRISCE-IARKVGDP 82
++L R+ E ++ + DP
Sbjct: 907 LRNTHLLGRRLVLEFVSEEATDP 929
>gi|452983642|gb|EME83400.1| hypothetical protein MYCFIDRAFT_164576, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 833
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 240/780 (30%), Positives = 380/780 (48%), Gaps = 107/780 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI VK LP E R FSQ G ++TDAK+ +R+ ++G++T ++A++A+K
Sbjct: 4 SRIFVKGLPHTFDEASFRTHFSQNGRQVTDAKIF-----PNRRIGYVGYKTPEDAQKAVK 58
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIE 119
YFNK+++ RI E+AR V D + ++ + + K+ V +A+ K E
Sbjct: 59 YFNKTFIRMSRIGVELARPVDD----QVQAKARTAAQTATPQPSKD-VGSAELKRKSVSE 113
Query: 120 KVTENDDPQLLEFLQVMQPRVKSKMW-----------------ANDTLIGLMAD------ 156
+ DP+L EFL +P+ K + W A D+ + D
Sbjct: 114 TKEKESDPKLKEFLDAYKPKSKKREWEAEAAQVDSNSHSAEGQAIDSQSMALVDAHDGAS 173
Query: 157 -----------QKAKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADEL 205
++AK+ A S+T +V D ++ A E+ + A
Sbjct: 174 DDEYENVPKKTKRAKLESETPTAAAPEVTSVTPNVSDDWEGFDNEADAEERIETEA-QAP 232
Query: 206 MSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSI 265
+SDMD+ +S+ + G ++EEE D+ + + D +
Sbjct: 233 VSDMDWIRSKTSRTL------------------GLLDDEEEQDNAARATPKDDIVASTPD 274
Query: 266 HSGVGEEDANGEIVDP-----GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFS 320
V E++ I P G+ KD++ V + RLFVRNLPY D+L F
Sbjct: 275 PVPVPEDEPISVIPTPPAKDDGSQPPVDKDIES-VRTTMRLFVRNLPYDVQRDDLEAEFE 333
Query: 321 KFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKS 380
FGN+ EVHI +DK + +KG AY+ Y+ P+SA RA+ D FQGRL+H++PA KK
Sbjct: 334 PFGNLEEVHIPLDKKSGSAKGFAYIQYSDPDSAERALVDRDGQTFQGRLIHIIPAFAKKE 393
Query: 381 S--DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVS 438
S D EL + + +K++R EA+ WN+L+M D VV ++A G+S
Sbjct: 394 SKLDDFELSKLPLKKQQQIKRKR-------EAANTMFNWNALYMNQDAVVSSVANSLGIS 446
Query: 439 KSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFL 498
KS++LD ++D AV+ A ET+VI +TK + GV++ S ++ G T L
Sbjct: 447 KSEVLDPTSSDAAVKQAHAETKVIQDTKDYFRSQGVDLDSFKKSQRGDT--------AIL 498
Query: 499 VKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGV 558
KN+PYD S EL ++F + G + + ++P + T+A+V + + AF LAY+R K
Sbjct: 499 AKNIPYDFSRDELKRLFEEQGDVKRFLMPPSGTIAIVEYANAAQCQTAFGALAYRRVKSS 558
Query: 559 PLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSL 618
L+LE AP ++ + + V EH + L+ V + ++ PD +L
Sbjct: 559 VLFLEKAPKNLFT-------GKPAPPVAAEHSVEAKASSSDLK-VAELNV-PDTAGPATL 609
Query: 619 FVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETA 675
FV+NLNF T + L F + +G LS +VK K G+ +SMGFGF+EF S + A
Sbjct: 610 FVRNLNFTTTTKLLTDTF--NTLDG-FLSARVKTKTDPKKPGQVLSMGFGFLEFRSAKQA 666
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKD---EQVVKKAEKDKSS--TKLLVRNVAFEAQRK 730
+ + G L+GH L ++ H D E+ AEK +S TKL+++N+ FEA +K
Sbjct: 667 QAALQAMDGYTLEGHKLQIRASHKGADAAEERRKADAEKKAASAKTKLVIKNLPFEASKK 726
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ + R+FV+ LP+T E R HFS+ G V D ++ I YV Y PE A +
Sbjct: 1 MAASRIFVKGLPHTFDEASFRTHFSQNG-----RQVTDAKIFPNRRIGYVGYKTPEDAQK 55
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
A++ + + + + V AR
Sbjct: 56 AVKYFNKTFIRMSRIGVELAR 76
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
L +KNL F+ +++R G + G++ SV+V K + + GFGF EF +++ A +
Sbjct: 714 LVIKNLPFEASKKDVRALLGAY---GQLRSVRVPKKMDRA---ARGFGFAEFTTIKEAQS 767
Query: 678 VCRDLQGTILDGHALILQL 696
L+ T L G L++
Sbjct: 768 AMEALRDTHLLGRRLVIDF 786
>gi|402083842|gb|EJT78860.1| multiple RNA-binding domain-containing protein 1 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 842
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 245/775 (31%), Positives = 380/775 (49%), Gaps = 100/775 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI V+NLP +TE R F+ K +ITD K++ +R+ F+GF+T + A EA K
Sbjct: 5 SRIFVRNLPPTITEADFRKHFAAKARDITDIKVI-----PARRIGFVGFKTAKAASEAAK 59
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRP------------WSRYSLKKEKEVSEDEKNPV 107
YFN+S++ +IS E+AR DP++ P S S K+ E + + P
Sbjct: 60 YFNRSFIRMSKISVELARPPSDPSLRAPTTLGTGHTDTPFLSGASQKQAPEGGQPDAKP- 118
Query: 108 LAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVS----- 162
KK + + DP+L E+++ MQ K +T + +A KA +
Sbjct: 119 -------KKRKREDLDLSDPKLKEYMETMQSAAKLDGAMAETPVPELASGKAIAALDGES 171
Query: 163 -----ENISQAIKGG--EKSITLHVKSDKSN---------VITDSQATEKS-KNAAADEL 205
E ++ K E S+ + D ++ + + A+E ++AAA
Sbjct: 172 DDDYEEIPARPAKRAAVETSVGRAPRPDAASEAALEARVQTLPEQPASETGLRDAAA--- 228
Query: 206 MSDMDYFKSRVKK--DWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKD 263
+D D+ +SR + D D++ D E + E + KD
Sbjct: 229 -TDDDWLRSRTNRLLDLVDADDPDAVPAPQVVAAPLPPASSTEAGDDAAQPTEMEQPPKD 287
Query: 264 SIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFG 323
+ V ++D G+ +D V ++ RLFVRNLPY+ATED+LR HF KFG
Sbjct: 288 RRMAPVSDKDRAGDALD-------------LVRKTSRLFVRNLPYSATEDDLRSHFEKFG 334
Query: 324 NVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK 383
+V EVH+ V K + SKG A VL+ SA A + D S+FQGR+LHV+PA+ KK S
Sbjct: 335 SVEEVHLPVAKSSA-SKGYALVLFTSASSAIDAFQKSDGSLFQGRILHVLPAQSKKESKL 393
Query: 384 QELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLL 443
E S K +++ +K +EA+ + WN+L+M D V ++A + GVSKS+LL
Sbjct: 394 DEFAIS-----KLPLKKQNLIKKKAEAASTSFNWNALYMSQDAVNASVADRLGVSKSELL 448
Query: 444 DREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLP 503
D + D +V+ A+ ET +I ETK G+++ + + +R + + LVKN
Sbjct: 449 DPSSADASVKQAIAETSIIQETKVYFATNGIDLDAFK--------SRQRGDTIILVKNFS 500
Query: 504 YDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLE 563
Y ++ EL KMF + G + +V++P + T+A+V F + A AAF LAY+R K L+LE
Sbjct: 501 YGTTIDELRKMFEEHGIVLRVLMPPSGTIAIVEFAQAPHARAAFMNLAYRRVKDSVLFLE 560
Query: 564 WAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNL 623
P + T Q + G AK+ + + LE D D E+ SLFV+ L
Sbjct: 561 KGPKGLFKNQPTPTQIQSSSG--GPTAAKKLSVTELLE----RDEVQDVAETTSLFVRGL 614
Query: 624 NFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCR 680
NF T E L + F +G +S +VK + G +SMGFGF+EF + E A +
Sbjct: 615 NFATTTEKLAETF--RPLDG-FVSARVKSRTDSKRPGVVLSMGFGFVEFRTKEQAHAALK 671
Query: 681 DLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSS------TKLLVRNVAFEAQR 729
+ G L+GH L ++ H D ++ E DK+ TK++++N+ FEA R
Sbjct: 672 TMDGYTLEGHVLAVKASHRGLDAAEERRRE-DKAKKLAGQHTKIIIKNLPFEATR 725
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ ++R FG + G++ +V+V K N +N + GF F EF + + A N
Sbjct: 714 IIIKNLPFEATRADVRALFGTY---GQLRAVRVPK---NFENKTRGFAFAEFTTPKEAEN 767
Query: 678 VCRDLQGTILDGHALILQLCHAK---KDEQVVKKAEK 711
L T L G L+L+ A+ +E++ K +K
Sbjct: 768 ALNALGSTHLLGRKLVLEFAQAEAVDAEEEIAKMQKK 804
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T +R F G++ ++ + + K+R FAF F T +EAE A+
Sbjct: 712 TKIIIKNLPFEATRADVRALFGTYGQLRAVRVPKNFENKTRGFAFAEFTTPKEAENALNA 771
Query: 61 FNKSYLDTCRISCEIAR 77
++L ++ E A+
Sbjct: 772 LGSTHLLGRKLVLEFAQ 788
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
++KNLP++++ ++ +FG +G L V +P T+ A F P EA A L
Sbjct: 714 IIIKNLPFEATRADVRALFGTYGQLRAVRVPKNFENKTRGFAFAEFTTPKEAENALNALG 773
Query: 552 YKRYKGVPLYLEWAPSDVL 570
G L LE+A ++ +
Sbjct: 774 STHLLGRKLVLEFAQAEAV 792
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 297 ESGRLFVRNLPYTATEDELREHF-SKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
ES R+FVRNLP T TE + R+HF +K +++++ ++ ++ I +V + ++AS
Sbjct: 3 ESSRIFVRNLPPTITEADFRKHFAAKARDITDIKVIP------ARRIGFVGFKTAKAASE 56
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGT 394
A + + S + + V AR SD L T+ GT
Sbjct: 57 AAKYFNRSFIRMSKISVELAR--PPSDPS-LRAPTTLGT 92
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT ++R F +G + V + + + K ++G A+ + P+ A A+
Sbjct: 713 KIIIKNLPFEATRADVRALFGTYGQLRAVRVPKNFENK-TRGFAFAEFTTPKEAENALNA 771
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 772 LGSTHLLGRKL 782
>gi|326437182|gb|EGD82752.1| hypothetical protein PTSG_03403 [Salpingoeca sp. ATCC 50818]
Length = 1027
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 267/443 (60%), Gaps = 28/443 (6%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E+GR+FVRNL Y TED++R F KFG +SEVH+ +D TK+ KGIA+V + PE+A +A
Sbjct: 501 ETGRIFVRNLAYVCTEDDIRALFEKFGPLSEVHMPLDTQTKKPKGIAFVTFLHPENAVKA 560
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG---N 413
LD S+F+GRLLH++PAR + S G + +E+KA+E N
Sbjct: 561 FTQLDASVFKGRLLHLLPARTRDSDS----------GIVNVDTTNYKEKKAAELKSKREN 610
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND-LAVRIALGETQVIAETKKALTNA 472
+ WN+LF+R D V +++A + GVSK +LL+ +++ LAVR+A+GET++I + K+ L
Sbjct: 611 SYNWNTLFLRQDAVADSMAAELGVSKGELLNAKSDSGLAVRLAMGETRIIQDNKQFLRQH 670
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL 532
GV + + + G RS V LVKNLP++S+E +L MF K G++DK + P ++T+
Sbjct: 671 GVYLDAFDTRVTG------RSKTVILVKNLPFNSTEADLRPMFEKHGAVDKFVFPPSRTM 724
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
ALV F+EP EA AAF+GLAY++YKG LYLEWAP +V + + Q +
Sbjct: 725 ALVSFIEPSEARAAFRGLAYRKYKGEMLYLEWAPENVFAVPEEEEEVQDEATAAAPKISL 784
Query: 593 RALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK 652
A+ + + G +A ++ + S ++FVKNLNF+T D L F + R V KK
Sbjct: 785 AAI--RGVHGQGEAAVELESTASTTVFVKNLNFETGDNALYNLF-QTCGTIRSCRVATKK 841
Query: 653 HLKNGKN-VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQ--VVKKA 709
+ N + +SMGFGF+EF + A + LQG LDGH L L+L + +Q V ++
Sbjct: 842 NPHNPQELLSMGFGFVEFKTHAEAVKAMKKLQGAELDGHKLELKLSTRTQQQQGPVARRE 901
Query: 710 EK--DKSSTKLLVRNVAFEAQRK 730
K ++TK++VRNVAFEA +K
Sbjct: 902 GKLIKGATTKVVVRNVAFEATKK 924
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 94/181 (51%), Gaps = 38/181 (20%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI +K LPK E RLR F + G+IT + R+ A++G+ E+ AE A++Y
Sbjct: 4 SRIIIKGLPKKFNESRLRTIFGEHGDITQILYL-----PKRRIAYVGYSEEKMAEGAVEY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS--------LKKEK--------------- 97
N++Y+DT +I +A VGD +PRPWS+YS L+K++
Sbjct: 59 RNETYIDTDQIKVSLAFGVGDERIPRPWSQYSKGSSANAALQKKREMVLRQKKGKKAQEE 118
Query: 98 -----EVSEDEKNPVLAAKRGEKKTIEKVTEND-----DPQLLEFLQVMQPRVKSKMWAN 147
EV E + LA E+ ++K+ + + +P+L E++QVM P+ K +WAN
Sbjct: 119 KQQKQEVKEANASKTLATLEKEQDMLKKLYDVEANPQLNPELHEYMQVMVPKNKRLVWAN 178
Query: 148 D 148
D
Sbjct: 179 D 179
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDK-DTKRSKGIAYVLYAIPESASRAIE 358
++ VRN+ + AT+ ++R+ F+ +G+V V + D + +G A+V ++ E A A E
Sbjct: 911 KVVVRNVAFEATKKDIRQLFTPYGDVKSVRLPPKSFDPTQHRGFAFVEFSSKEEAKSAFE 970
Query: 359 VLDNSI-FQGRLLHVMPARHKKSSDK 383
L S GR L++ A+ S +K
Sbjct: 971 ALSGSTHLYGRRLNLEFAKDDNSVEK 996
>gi|114647138|ref|XP_522578.2| PREDICTED: probable RNA-binding protein 19 [Pan troglodytes]
gi|410216396|gb|JAA05417.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410216398|gb|JAA05418.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263956|gb|JAA19944.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263958|gb|JAA19945.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292596|gb|JAA24898.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292598|gb|JAA24899.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339181|gb|JAA38537.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339183|gb|JAA38538.1| RNA binding motif protein 19 [Pan troglodytes]
Length = 961
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 180/489 (36%), Positives = 278/489 (56%), Gaps = 56/489 (11%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +++K Q +L ESGRLFVRNLPYT+TE++L + FSK+G +SE+H
Sbjct: 375 GAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYP 434
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A++ + PE A +A +D +FQGR+LHV+P+ KK + + ++++
Sbjct: 435 IDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKKEASE----DASA 490
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ AS + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 491 LGSSSYKKKKEAQDKANSASSHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSV 548
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 549 AVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTVAAE 602
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L + FG+FGSL +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 603 LQETFGRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVGVF 662
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR------------------ 612
S ++ K + D + A E +G T D +P
Sbjct: 663 SSAAPQK-KKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMGEEEEEEE 721
Query: 613 ------VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFG 665
+ +LF+KNLNF T +E L++ F K G + S + KK K G +SMGFG
Sbjct: 722 EEEEESLPGCTLFIKNLNFDTTEEKLKEVFS---KVGTVKSCSISKKKNKAGALLSMGFG 778
Query: 666 FIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVR 721
F+E+ E A + LQG ++DGH L +++ V K+ + ++++K+LVR
Sbjct: 779 FVEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTSARKKQVPRKQTTSKILVR 838
Query: 722 NVAFEAQRK 730
N+ F+A +
Sbjct: 839 NIPFQAHSR 847
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 195/391 (49%), Gaps = 45/391 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A K+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P + +KK
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVA 121
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKGGEK 174
+EK+ E D + EFL V Q R ++ WAND L + K+K S+ ++ G++
Sbjct: 122 GQLEKLKE--DTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQE 179
Query: 175 SITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSR-VKKDWSDSESEDDSAGDD 233
S + D + +A+ + K A EL SDMDY KS+ VK S S E++S +
Sbjct: 180 SEEEGARED-----LEEEASLEPKAAVQKEL-SDMDYLKSKMVKAGSSSSSEEEESEDEA 233
Query: 234 DDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANGEIVDPG 282
D+G E EEE++ ++++ G G+E +A E P
Sbjct: 234 VHCDEGSEAEEEDSS--------ATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPA 285
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
N Q+E + +R P+ TE + E + V+ + IV + ++ G
Sbjct: 286 N--------QKEPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVA-IRIVRNAHGNKT-GY 335
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
+V ++ E +A++ + GR + V
Sbjct: 336 IFVDFSNEEEVKQALKC-NREYMGGRYIEVF 365
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP T V FL +A
Sbjct: 829 KQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDA 888
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 889 KRAFNALCHSTHLYGRRLVLEWADSEVTLQA 919
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 833 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 892
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 893 NALCHSTHLYGRRLVLEWA 911
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASRA 356
+ ++ VRN+P+ A E+RE FS FG + V + T +G +V + + A RA
Sbjct: 832 TSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRA 891
Query: 357 IEVLDNSI-FQGRLL 370
L +S GR L
Sbjct: 892 FNALCHSTHLYGRRL 906
>gi|397525018|ref|XP_003832476.1| PREDICTED: probable RNA-binding protein 19 [Pan paniscus]
Length = 961
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 180/489 (36%), Positives = 278/489 (56%), Gaps = 56/489 (11%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +++K Q +L ESGRLFVRNLPYT+TE++L + FSK+G +SE+H
Sbjct: 375 GAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYP 434
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A++ + PE A +A +D +FQGR+LHV+P+ KK + + ++++
Sbjct: 435 IDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKKEASE----DASA 490
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ AS + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 491 LGSSSYKKKKEAQDKANSASSHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSV 548
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 549 AVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAE 602
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L + FG+FGSL +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 603 LQETFGRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVGVF 662
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR------------------ 612
S ++ K + D + A E +G T D +P
Sbjct: 663 SSAAPQK-KKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEEE 721
Query: 613 ------VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFG 665
+ +LF+KNLNF T +E L++ F K G + S + KK K G +SMGFG
Sbjct: 722 EEEEESLPGCTLFIKNLNFDTTEEKLKEVFS---KVGTVKSCSISKKKNKAGALLSMGFG 778
Query: 666 FIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVR 721
F+E+ E A + LQG ++DGH L +++ V K+ + ++++K+LVR
Sbjct: 779 FVEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTSARKKQVPRKQTTSKILVR 838
Query: 722 NVAFEAQRK 730
N+ F+A +
Sbjct: 839 NIPFQAHSR 847
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 195/391 (49%), Gaps = 45/391 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A K+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P + +KK
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVA 121
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKGGEK 174
+EK+ E D + EFL V Q R ++ WAND L + K+K S+ ++ G++
Sbjct: 122 GQLEKLKE--DTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQE 179
Query: 175 SITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSR-VKKDWSDSESEDDSAGDD 233
S + D + +A+ + K A EL SDMDY KS+ VK S S E++S +
Sbjct: 180 SEEEGARED-----LEEEASLEPKAAVQKEL-SDMDYLKSKMVKAGSSSSSEEEESEDEA 233
Query: 234 DDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANGEIVDPG 282
D+G E EEE++ ++++ G G+E +A E P
Sbjct: 234 VHCDEGSEAEEEDSS--------ATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPA 285
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
N Q+E + +R P+ TE + E + V+ + IV + ++ G
Sbjct: 286 N--------QKEPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVA-IRIVRNAHGNKT-GY 335
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
+V ++ E +A++ + GR + V
Sbjct: 336 IFVDFSNEEEVKQALKC-NREYMGGRYIEVF 365
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP T V FL +A
Sbjct: 829 KQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDA 888
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 889 KRAFNALCHSTHLYGRRLVLEWADSEVTLQA 919
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 833 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 892
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 893 NALCHSTHLYGRRLVLEWA 911
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASRA 356
+ ++ VRN+P+ A E+RE FS FG + V + T +G +V + + A RA
Sbjct: 832 TSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRA 891
Query: 357 IEVLDNSI-FQGRLL 370
L +S GR L
Sbjct: 892 FNALCHSTHLYGRRL 906
>gi|332250675|ref|XP_003274476.1| PREDICTED: probable RNA-binding protein 19 [Nomascus leucogenys]
Length = 997
Score = 308 bits (790), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 181/488 (37%), Positives = 277/488 (56%), Gaps = 55/488 (11%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +++K Q +L ESGRLFVRNLPYT+TE++L + FSK+G +SE+H
Sbjct: 412 GAPKNTTKSWQGRILRENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYP 471
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG +V + PE A +A +D +FQGR+LHV+P+ KK + + ++++
Sbjct: 472 IDSLTKKPKGFGFVTFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKKEASE----DASA 527
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ AS + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 528 LGSSSYKKKKEAQDKANSASSHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSV 585
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 586 AVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAE 639
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L + FG+FGSL +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 640 LQETFGRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVGVF 699
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR------------------ 612
S ++ K + DA + A E +G T D +P
Sbjct: 700 SSAAPQK-KKLQDAPSEPMEKDPAEPETVPDGKTPEDENPTEEGADNSSAKMEEEEEEEE 758
Query: 613 -----VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGF 666
+ +LF+KNLNF T +E L++ F K G + S + KK K G +SMGFGF
Sbjct: 759 EEEESLPGCTLFIKNLNFDTTEEKLKEVFS---KVGTVKSCSISKKKNKAGALLSMGFGF 815
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRN 722
+E+ E + LQG I+DGH L +++ V K+ + ++++K+LVRN
Sbjct: 816 VEYRKPEQTQKALKQLQGHIVDGHKLEVRISERATKPAVTSARKKQVPRKQTTSKILVRN 875
Query: 723 VAFEAQRK 730
+ F+A +
Sbjct: 876 IPFQAHSR 883
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 196/391 (50%), Gaps = 45/391 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A+K+
Sbjct: 39 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKALKH 98
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P + +KK
Sbjct: 99 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAHKPSQPKQPPKDSTTPEIKKDEKKKKVA 158
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKGGEK 174
+EK+ E D + EFL V Q R ++ WAND L + K+K S+ ++ G++
Sbjct: 159 GQLEKLKE--DTEFQEFLSVHQRRTQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQE 216
Query: 175 SITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSR-VKKDWSDSESEDDSAGDD 233
S + + + + +A+ + K A EL SDMDY KS+ VK + S S E +S +
Sbjct: 217 S-----EEEGAGEDLEEEASLEPKAAVQKEL-SDMDYLKSKMVKAESSSSSEEGESEDEA 270
Query: 234 DDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANGEIVDPG 282
D+G E EEE++ I+++ G G+E +A E P
Sbjct: 271 VHCDEGSEAEEEDST--------ATPILQERDSKGAGQEQGMPAGKKRPPEARAETEKPA 322
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
N Q+E + +R P+ TE + E + V+ + IV + ++ G
Sbjct: 323 N--------QKEPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVA-IRIVRNAHGNKT-GY 372
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
+ ++ E +A++ + GR + V
Sbjct: 373 IFADFSNEEEVKQALKC-NREYMGGRYIEVF 402
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP T V FL +A
Sbjct: 865 KQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDA 924
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 925 KRAFNALCHSTHLYGRRLVLEWADSEVTLQA 955
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRS 339
P S+ K V ++ S ++ VRN+P+ A E+RE FS FG + V + T
Sbjct: 852 PAVTSARKKQVPRKQTTS-KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTH 910
Query: 340 KGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
+G +V + + A RA L +S GR L
Sbjct: 911 RGFGFVDFLTKQDAKRAFNALCHSTHLYGRRL 942
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 869 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 928
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 929 NALCHSTHLYGRRLVLEWA 947
>gi|406865361|gb|EKD18403.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 820
Score = 308 bits (789), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 232/756 (30%), Positives = 377/756 (49%), Gaps = 75/756 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI +K LP +TE+ + F ITDAKL+ +R+ ++G+++ +EA +A+KY
Sbjct: 4 SRIFIKGLPPTITENEFKKHFGAIATITDAKLI-----SNRRIGYVGYKSPEEAAKAVKY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAA-----KRGEK 115
FN++++ +I EIAR + D +P P + ++ +E + K A G K
Sbjct: 59 FNRTFIRMSKIGVEIARPIADTTLP-PSRKAQREQRREDATARKQACAEAADASFSNGVK 117
Query: 116 KTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDT--------LIGLMADQKAKVSENISQ 167
+ + V E+D P+L EFL VMQP K + W T + + +K E
Sbjct: 118 RKRDVVDESD-PKLQEFLDVMQPASKPRTWNAQTEDDEPPTKMQAMEIPEKDSDGEYEPV 176
Query: 168 AIKGGEKSITL--HVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKK--DWSDS 223
K +KS L + + +S K A + +D D+ +SR + D D
Sbjct: 177 PKKSRKKSPPLSNEIPAPIVEATPESTDVNGPKTTDAPDATND-DWLRSRTNRLLDLMDP 235
Query: 224 ESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGN 283
+ E +AG ++ E + + ++ E D + + +++ + E +DP
Sbjct: 236 D-EIGTAGTGAVPNEKAEPAFVADTRSDEALELADPVAEQQ------KDEEDKEELDP-- 286
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGI 342
+ + +GRLF RNL Y+A+ED+LREHF+ FG++ EVH+ VD K T SKG
Sbjct: 287 -------TIEAIKATGRLFARNLAYSASEDDLREHFAPFGSLEEVHLPVDAKGT--SKGY 337
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRRE 402
YV Y+ P +A+ A LD FQGRLLH++PA K+ + E L +++
Sbjct: 338 VYVQYSDPSAAAEAFHALDGEPFQGRLLHILPASAKRDNKLDEF------AVAKLPLKKQ 391
Query: 403 EERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI 462
++ K + +T WNSLFM D V E IA + GVSKS++LD + D + A+ ET I
Sbjct: 392 KQIKKKAEATSTFNWNSLFMNQDAVNEAIASRLGVSKSEMLDPTSADSGYKQAIAETSAI 451
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
E+K GV++ + + G T LVKN PY +S EL KMF FG +
Sbjct: 452 QESKTYFAKNGVDLDAFKRQERGDT--------AILVKNFPYGTSLEELRKMFEPFGQVL 503
Query: 523 KVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN 582
+V++P T+A+V F EP +A AAF LAY++ + L+LE AP ++ S+ N
Sbjct: 504 RVLMPPIGTIAIVEFSEPTKARAAFASLAYRKVQDSVLFLEKAPKNLFKNPSS------N 557
Query: 583 DAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKE 642
VV +++L + + + +++ +LFV+NLNF T + L + F +
Sbjct: 558 AVVVPADSMATKSGKEKLSASDLLEKESETLDTSTLFVRNLNFTTTSDRLTEAFKPL--D 615
Query: 643 GRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHA 699
G +S +VK K G+ +SMGFGF+EF S A + G +L+ H L+++ H
Sbjct: 616 G-FISARVKTKTDPRKPGQVLSMGFGFLEFRSKAQAQAALTAMNGYVLEDHKLLIKASHK 674
Query: 700 KKDEQVVKKAEKDKSS-----TKLLVRNVAFEAQRK 730
D ++ E + TK++++N+ F+A ++
Sbjct: 675 GVDAAEERRKEDNAKKHAGKRTKIIIKNLPFQATKQ 710
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F GE+ ++ + D +R FAF F T +EAE A++
Sbjct: 696 TKIIIKNLPFQATKQDVRGLFGAFGELRSVRVPKKFDHSTRGFAFANFITAREAENALEA 755
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ E A
Sbjct: 756 LKDTHLLGRRLVLEFA 771
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ S R+F++ LP T TE+E ++HF +++ ++ ++ I YV Y PE A++
Sbjct: 1 MASSRIFIKGLPPTITENEFKKHFGAIATITDAKLISNRR------IGYVGYKSPEEAAK 54
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
A++ + + + + V AR
Sbjct: 55 AVKYFNRTFIRMSKIGVEIAR 75
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 127/313 (40%), Gaps = 57/313 (18%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+N PY + +ELR+ F FG V V + IA V ++ P A A L
Sbjct: 478 ILVKNFPYGTSLEELRKMFEPFGQVLRVLM------PPIGTIAIVEFSEPTKARAAFASL 531
Query: 361 DNSIFQGRLLHVMPAR---HKKSSDKQELHNSTSQGTKTLKQRREEERKAS---EASGNT 414
Q +L + A K S + + S TK+ K E+ AS E T
Sbjct: 532 AYRKVQDSVLFLEKAPKNLFKNPSSNAVVVPADSMATKSGK----EKLSASDLLEKESET 587
Query: 415 KAWNSLFMR-------PDTVVENIARKHGV------SKSDLLDREANDLAVRIALGETQV 461
++LF+R D + E G +K+D + L++ E +
Sbjct: 588 LDTSTLFVRNLNFTTTSDRLTEAFKPLDGFISARVKTKTDP-RKPGQVLSMGFGFLEFRS 646
Query: 462 IAETKKALT-----------------NAGVNVSS--LEEFSAGKTDGLKRSNHVFLVKNL 502
A+ + ALT + GV+ + +E +A K G KR+ ++KNL
Sbjct: 647 KAQAQAALTAMNGYVLEDHKLLIKASHKGVDAAEERRKEDNAKKHAG-KRTK--IIIKNL 703
Query: 503 PYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKG 557
P+ +++ ++ +FG FG L V +P ST+ A F+ EA A + L G
Sbjct: 704 PFQATKQDVRGLFGAFGELRSVRVPKKFDHSTRGFAFANFITAREAENALEALKDTHLLG 763
Query: 558 VPLYLEWAPSDVL 570
L LE+A D +
Sbjct: 764 RRLVLEFAADDAV 776
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R F FG + V V K ++G A+ + A A+E
Sbjct: 697 KIIIKNLPFQATKQDVRGLFGAFGELRSVR-VPKKFDHSTRGFAFANFITAREAENALEA 755
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 756 LKDTHLLGRRL 766
>gi|402217030|gb|EJT97112.1| hypothetical protein DACRYDRAFT_72431 [Dacryopinax sp. DJM-731 SS1]
Length = 766
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 233/773 (30%), Positives = 374/773 (48%), Gaps = 156/773 (20%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEI-----------TDAKLMRTKDGKSRQFAFIGFR 49
SR+ VKNLP Y+T+ RLRD FSQ+ I TDA++ R DG SR+F F+G++
Sbjct: 2 SRLIVKNLPVYITDQRLRDHFSQQPFISRHAGPGGYTLTDARIARKPDGTSRKFGFVGYK 61
Query: 50 TEQEAEEAIKYFNKSYLDTCRISCEIA--------RKVGDPNMPRPWSRYSLKKEKEVSE 101
T +EA+ A +++N++Y+D+ RI+ E+ R+ GD N P P + +
Sbjct: 62 TREEADRAREWWNRTYIDSTRITVEVVEENHEPRKRRAGDENDPPP---------RTTAN 112
Query: 102 DEKNPVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKV 161
+KN LAAK KK D Q +F+ M + ++ WA+D L
Sbjct: 113 GDKN--LAAKHESKK---------DTQKDKFVNAMTSKSTTRTWADDLL----------- 150
Query: 162 SENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAAD-----ELMSDMDYFKSRV 216
E + +++ S +T +E++KNA AD E +SDM++ + R+
Sbjct: 151 --------PPPEPTNMEKLRTVDSVTVT----SEENKNAQADGEPTTEGLSDMEWMRRRM 198
Query: 217 KK------DWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVG 270
K +W E DD G D + G +E++ + ++ ++I
Sbjct: 199 TKTLDADAEWKGFEQSDDEDGAADQPNSGAIGVQEQSSKEAERHQTAETI---------- 248
Query: 271 EEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHI 330
L +GRLF+RNL YT T EL+EHFS+FG + +VH+
Sbjct: 249 -------------------------LSTGRLFLRNLAYTCTSAELQEHFSRFGEIQQVHL 283
Query: 331 VVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNST 390
+ ++ G+A++ +A P A A E LD S FQGRLLH++ A K+ + S
Sbjct: 284 PLTP-SRTPSGLAFITFADPSCALAAYEALDTSPFQGRLLHILGAVDKRPA------ASV 336
Query: 391 SQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL 450
+ K+LK ++ +ERK S SG+ W L++ PD V +A K GV KS++L+ E +
Sbjct: 337 TSAPKSLKDKKLDERKKS--SGHGWDWAMLYLNPDAVAAAVAGKLGVEKSEILNAEEGNA 394
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AV++AL ET V+ ETK L + GV++S+ +G+ +RS LVKNLP ++
Sbjct: 395 AVKLALAETSVVQETKLFLESNGVDISAF----SGRP---QRSPTTILVKNLPAFTTPQA 447
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLE------W 564
+ ++F G L V++P + +ALV F + EA A++ + Y+R+ G +YLE W
Sbjct: 448 IRELFQPHGKLKSVVVPPSGAIALVEFDDESEAGVAWRNVNYRRFGGSIIYLERGPVGLW 507
Query: 565 APSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLN 624
PS + ++ G ++ D V+ L E + P+ +L++KNL+
Sbjct: 508 KPSGA-AATAKGTGPEREDRVI-------VLPEDEQP--------PEAAPGSTLYIKNLS 551
Query: 625 FKTCDENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDL 682
F T L G + + V+ K + K+ + MG+GF F S E A + +
Sbjct: 552 FTTASSTLSSL--FSTLPGFVYARVQTKPNPKDPAGRLRMGYGFAGFGSREQAERARKAM 609
Query: 683 QGTILDGHALILQLCHAKK--DEQVVKK----AEKDKSSTKLLVRNVAFEAQR 729
G +GH L ++ K DEQ A +K + K++V+NV FEA +
Sbjct: 610 DGATCEGHKLSVRFAGRGKEEDEQPAGPVGVFALGNKKTAKVIVKNVPFEATK 662
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P T+ +R F G++ +L D ++R FAF+ F + +EAE +
Sbjct: 649 AKVIVKNVPFEATKADIRSLFQGYGQLKSVRLPTKFDRRTRGFAFLEFVSRKEAENVMAA 708
Query: 61 FNKSYL 66
++L
Sbjct: 709 LKHTHL 714
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLAY 552
+VKN+P+++++ ++ +F +G L V LP+ T+ A + F+ EA L +
Sbjct: 652 IVKNVPFEATKADIRSLFQGYGQLKSVRLPTKFDRRTRGFAFLEFVSRKEAENVMAALKH 711
Query: 553 KRYKGVPLYLEWA 565
G L L+WA
Sbjct: 712 THLLGRHLVLDWA 724
>gi|145228995|ref|XP_001388806.1| multiple RNA-binding domain-containing protein 1 [Aspergillus niger
CBS 513.88]
gi|134054902|emb|CAK36914.1| unnamed protein product [Aspergillus niger]
gi|350638000|gb|EHA26356.1| multiple RNA-binding domain-containing protein [Aspergillus niger
ATCC 1015]
Length = 825
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 240/776 (30%), Positives = 396/776 (51%), Gaps = 109/776 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP +++D+LR F+ + ++TDA ++ R+ F+GF++ + A++A+ Y
Sbjct: 4 TRVFVSGLPPTLSDDQLRKHFATRFQVTDAHVL-----PKRRIGFVGFKSHEVAQQAVSY 58
Query: 61 FNKSYLDTCRISCEIARKV-GDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKR-GEKKTI 118
FNK+Y+ +IS +IA+ + +P +R + K +K + + + L KR GE
Sbjct: 59 FNKTYVKMSKISVDIAKPIDAEP------TRKAGKHDKSSASNAADTSLKRKRDGENAP- 111
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLM-----ADQKAKVSENISQAIKGGE 173
D +L E+L VMQ K+K WAND + A+Q A+V E +
Sbjct: 112 ------QDARLQEYLSVMQHSSKTKTWANDDVPKPPENDSPAEQPAEVEEQPQELTYAQR 165
Query: 174 KSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMD---YFKSRVKKDWSDSESEDDSA 230
K L + D S + ++ + + + ++ D ++ ++D + +E+E +
Sbjct: 166 KKAKLGEEYDHSK---EMHTADREAHGSPEPMVVDHSGEGNAEAPAEQDDTVAEAEAPAV 222
Query: 231 GDDD------DDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNP 284
D D G +EEE+ D + + ++ + +++ G DA +IV P
Sbjct: 223 SDADWLRSKTSRLLGLLDEEEQADFDAAAQQKESAAPEEAEDPGADSRDA--QIVAPA-- 278
Query: 285 SSSSKDVQQEVLE--------SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT 336
++ K VQ+ ++ S RLFVRNL Y +E +L F+ FG + E+H+ D
Sbjct: 279 ATEDKTVQEPQVDTNIENIRLSARLFVRNLAYDTSESDLEPLFAPFGRIEEIHVAFDTRV 338
Query: 337 KRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGT 394
SKG AY+ Y ++A A + LD FQGRL+H++PA KK+ D EL
Sbjct: 339 NTSKGFAYIQYLDADAAVEAYKNLDGKHFQGRLMHILPAAAKKTYKIDDAEL-------A 391
Query: 395 KTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRI 454
K +++++ +K +AS +T +WNSL+M D V+ ++A + GVSK+DLLD ++D AV+
Sbjct: 392 KLPLKKQKQIKKKMDASSSTFSWNSLYMNTDAVMSSVAERLGVSKADLLDPTSSDAAVKQ 451
Query: 455 ALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKM 514
A ET VI ETK + GVN+ + ++ +R N LVKN Y EL KM
Sbjct: 452 AHAETHVIQETKAYFSANGVNIEAFKQ--------RERGNTAILVKNFSYGVKTDELRKM 503
Query: 515 FGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
F FG + ++++P + T+A+V F P EA AFKGLAY++ L+LE AP D+
Sbjct: 504 FEPFGQITRLLMPPSGTIAIVEFSRPDEAQKAFKGLAYRKLGDSILFLEKAPKDLF---- 559
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQL--EGVTDAD------IDPDRVESRSLFVKNLNFK 626
+ AVV ++A +E + +G + AD +D D + +LFVKNLNF
Sbjct: 560 -------DAAVV----PQKATIETKAVSQGFSTADTFAADEVD-DLTPTTTLFVKNLNFA 607
Query: 627 TCDENLRKHFGEHIKEGRILSVKVK-----KHLKNGKNVSMGFGFIEFDSVETATNVCRD 681
T +++ F +G +S K+K KH G+ +SMGFGF+EF S A +
Sbjct: 608 TTNQSFVDLF--RPLDG-FVSAKIKTKPDPKH--PGQTLSMGFGFVEFRSKAQAQSALAA 662
Query: 682 LQGTILDGHALILQLCHAKKD-------EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ G LD H L++++ H D E KK + TK++++N+ F+A +K
Sbjct: 663 MNGYKLDQHELVVRVSHRGMDAAEERRREDTAKKVAARR--TKIIIKNLPFQATKK 716
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V + + GFGF +F S A N
Sbjct: 704 IIIKNLPFQATKKDVRSLFGAY---GQLRSVRVPQKFDRS---ARGFGFADFVSAREAEN 757
Query: 678 VCRDLQGTILDGHALILQLCH 698
L+ T L G L+L+ +
Sbjct: 758 AMDALKNTHLLGRKLVLEFAN 778
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 28/141 (19%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+FV LP T ++D+LR+HF+ V++ H++ KR I +V + E A +
Sbjct: 1 MESTRVFVSGLPPTLSDDQLRKHFATRFQVTDAHVL----PKRR--IGFVGFKSHEVAQQ 54
Query: 356 AIEVLDNSIFQ--------GRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKA 407
A+ + + + + + P R DK N+ +LK++R+ E
Sbjct: 55 AVSYFNKTYVKMSKISVDIAKPIDAEPTRKAGKHDKSSASNAAD---TSLKRKRDGENAP 111
Query: 408 SEA-----------SGNTKAW 417
+A S TK W
Sbjct: 112 QDARLQEYLSVMQHSSKTKTW 132
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R F F F + +EAE A+
Sbjct: 702 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPQKFDRSARGFGFADFVSAREAENAMDA 761
Query: 61 FNKSYLDTCRISCEIA 76
++L ++ E A
Sbjct: 762 LKNTHLLGRKLVLEFA 777
>gi|380490988|emb|CCF35636.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 856
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 240/781 (30%), Positives = 392/781 (50%), Gaps = 101/781 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI V+ LP +TE R FS G E+TD K++ R+ ++G++T + A +A+K
Sbjct: 15 SRIFVRGLPPKITEADFRQHFSAGGREVTDVKVI-----PLRRIGYVGYKTPEVAAKAVK 69
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAA---KRGEKK 116
YFN+SY+ RI+ E+AR + DP P+ + + + S P ++ K +KK
Sbjct: 70 YFNRSYIRMSRINVELARPIADP-APQHTNGSTGQTYVATSSGSAAPQPSSIEEKDAKKK 128
Query: 117 TIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSEN------------ 164
+ + DP+L EFLQVM P + +D + + ++ K+ ++
Sbjct: 129 RKREDLDESDPKLREFLQVMGPSKNAANEMSDVMDPVAVKEQKKLLQDGESDDEYEAIPS 188
Query: 165 ------ISQAIKGGEKSITLHVKSDKSNVITDSQAT---------EKSKNAAADELMSDM 209
+ +A KG +++ + +K ++D+ E++ A + + +D
Sbjct: 189 RPEKRQMREAPKGEQRTEPM---PEKDEAMSDAAPAPESMEDVPQEQASAAPINTVTTDD 245
Query: 210 DYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGV 269
D+ +SR + D D GE + ++G++ S + + + V
Sbjct: 246 DWLRSRTNRLL-------------DLVDVGEAVQPPVQQNSGETAGSA-SAGQREVSAEV 291
Query: 270 GE----EDANGEIVDPGNPSSSSKDVQQE-----VLESGRLFVRNLPYTATEDELREHFS 320
E E G +VD N + + V++ + S RLFVRNLP++A E++LR HF
Sbjct: 292 TELPKAETKGGTMVD--NALAPIESVEENGTLATIKRSSRLFVRNLPFSANEEDLRAHFE 349
Query: 321 KFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKS 380
+G + EVH+ V SKG A V + ESA A + D FQGRLLHV+PA K+
Sbjct: 350 HYGELQEVHLPVTVGGA-SKGFAMVQFTNAESAVAAFQSTDGQTFQGRLLHVLPAEVKRD 408
Query: 381 SDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKS 440
+ E S K +++ RK +EA+ +T WNSL+M D V ++A + GVSKS
Sbjct: 409 AGLDEFAIS-----KLPLKKQNLIRKKAEAASSTFNWNSLYMSQDAVNASVANRLGVSKS 463
Query: 441 DLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVK 500
+LLD + D V+ A+ ET +I ETK + GV++ + + KR + LVK
Sbjct: 464 ELLDPTSADAGVKQAIAETSIIQETKAYFVSNGVDLDAFKS--------QKRGDTTILVK 515
Query: 501 NLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPL 560
N P+ ++ EL MF + G++ +V++P + T+A++ F +P A AAF LAY+R K L
Sbjct: 516 NFPFGTTMEELRTMFEEHGTVLRVLMPPSGTIAIIDFAQPAHAKAAFAKLAYRRIKDTVL 575
Query: 561 YLEWAPSDVL-SQSSTSKGNQKNDAVVG-EHDAKRALLEQQLEGVTDADIDPDRVESRSL 618
+LE AP D+ + +S S K D G + + LL + +G TD V + SL
Sbjct: 576 FLEKAPRDLFKNDASVSMTQGKEDRPAGVQKLSVTELLGRDEQGETD-------VVTTSL 628
Query: 619 FVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETA 675
FV+NLNF T E L + F +G +S +VK + K G+ +SMGFGF+ F + E A
Sbjct: 629 FVRNLNFSTTTEKLAETFKPL--DG-FVSARVKTKMDPKKPGQVLSMGFGFVVFKTKEQA 685
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS------STKLLVRNVAFEAQR 729
+ + G +L+GH L ++ H +D ++ E DK+ TK++++N+ FE +
Sbjct: 686 QAALQAMDGFVLEGHTLAVKASHKGQDAAEERRRE-DKARKAAGQRTKIVIKNLPFEVTK 744
Query: 730 K 730
K
Sbjct: 745 K 745
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGN-VSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+E+ R+FVR LP TE + R+HFS G V++V ++ + I YV Y PE A+
Sbjct: 12 METSRIFVRGLPPKITEADFRQHFSAGGREVTDVKVIP------LRRIGYVGYKTPEVAA 65
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ 392
+A++ + S + ++V AR Q + ST Q
Sbjct: 66 KAVKYFNRSYIRMSRINVELARPIADPAPQHTNGSTGQ 103
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP VT+ +R F G++ +L + +R FAF F +EAE A+
Sbjct: 731 TKIVIKNLPFEVTKKDIRTLFGTYGQLRAVRLPKKFGNTTRGFAFAEFVAPREAENALNA 790
Query: 61 FNKSYLDTCRI 71
++L R+
Sbjct: 791 LRDTHLLGRRL 801
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ +V++ K N + GF F EF + A N
Sbjct: 733 IVIKNLPFEVTKKDIRTLFGTY---GQLRAVRLPKKFGN---TTRGFAFAEFVAPREAEN 786
Query: 678 VCRDLQGTILDGHALIL 694
L+ T L G L+L
Sbjct: 787 ALNALRDTHLLGRRLVL 803
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
++KNLP++ ++ ++ +FG +G L V LP +T+ A F+ P EA A L
Sbjct: 733 IVIKNLPFEVTKKDIRTLFGTYGQLRAVRLPKKFGNTTRGFAFAEFVAPREAENALNALR 792
Query: 552 YKRYKGVPLYLEW 564
G L L++
Sbjct: 793 DTHLLGRRLVLDY 805
>gi|310790005|gb|EFQ25538.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 846
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 242/785 (30%), Positives = 380/785 (48%), Gaps = 108/785 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI V+ LP +TE R FS G E+TD K++ R+ ++G++T + A +A+K
Sbjct: 4 SRIFVRGLPPKITEADFRQHFSAGGREVTDVKVI-----PQRRIGYVGYKTPEVAAKAVK 58
Query: 60 YFNKSYLDTCRISCEIARKVGDPNM--PRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKT 117
YFNKSY+ RI+ E+AR + DP + + + + S P K +KK
Sbjct: 59 YFNKSYIRMSRINVELARPIADPVLQHTKGATIHVPLATPSHSAALTPPGAEDKDVKKKR 118
Query: 118 IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSEN------------- 164
+ + DP+L EFLQVM P + D L + A ++ K+ ++
Sbjct: 119 KREDLDESDPKLREFLQVMGPSKNAANDVPDVLDPVAAKEQKKLLQDGESDDEYEAIPSR 178
Query: 165 -----ISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADE---------LMSDMD 210
+ + KG ++S+ +K V+ D+ ++ A E + +D D
Sbjct: 179 PEKRQMREVPKGEQRSMP---TPEKDEVMPDAAPVPEAAEDAPQEQASVPPTNVVTTDDD 235
Query: 211 YFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVG 270
+ +SR + D +D+ +GE + + + SG
Sbjct: 236 WLRSRTNR-LLDLVDDDEVLQPPAQQTEGEPLGCAPAEQQKQPAKATELPTSGDAKSGAA 294
Query: 271 EEDANGEIVDPGNPSSSSK----DVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVS 326
EDA P+ SSK D + + RLFVRNLP++ ED+L+ HF ++G +
Sbjct: 295 AEDA---------PAPSSKVEDNDTLATIKRNARLFVRNLPFSTNEDDLQTHFGQYGELQ 345
Query: 327 EVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQEL 386
EVH+ V SKG A V + ESA A + D FQGRLLHV+PA K+ + E
Sbjct: 346 EVHLPVTA-AGASKGFAMVQFMSGESAVAAFQSTDGQTFQGRLLHVLPAEGKRDAGLDEF 404
Query: 387 HNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE 446
S K +++ RK ++A+ +T WNSL+M D V ++A + GVSKS+LLD
Sbjct: 405 AIS-----KLPLKKQNLIRKKAQAASSTFNWNSLYMNQDAVNASVASRLGVSKSELLDPT 459
Query: 447 ANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDS 506
+ D V+ A+ ET +I ETK + GV++ + + KR + LVKN P+ +
Sbjct: 460 SADAGVKQAIAETSIIQETKAYFVSNGVDLDAFKS--------QKRGDTTILVKNFPFGT 511
Query: 507 SEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAP 566
+ EL MF + G++ +V++P + T+A+V F +P A AAF LAY+R K L+LE P
Sbjct: 512 TMEELRTMFEEHGTVLRVLMPPSGTIAIVEFAQPAHAKAAFAKLAYRRIKDTVLFLEKGP 571
Query: 567 SDVLSQSSTSKGNQKNDAVV----GEHDAKRA--------LLEQQLEGVTDADIDPDRVE 614
KG KNDA + G+ D LL + +G D +E
Sbjct: 572 ----------KGLFKNDASIDMTQGKEDRPTGVQKLSVTELLGRDEQGEAD-------IE 614
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDS 671
+ SLFV+NLNF T E L + F +G +S +VK + K G+ +SMGFGF+ F +
Sbjct: 615 TTSLFVRNLNFSTTTEKLAETFKPL--DG-FVSARVKTKMDPKKPGQVLSMGFGFVIFKT 671
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS------STKLLVRNVAF 725
E A + + G +L+GH L ++ H +D ++ E DK+ TK++++N+ F
Sbjct: 672 KEQAQAALKTMDGFVLEGHTLAVKGSHKGQDAAEERRRE-DKARKAAGQRTKIVIKNLPF 730
Query: 726 EAQRK 730
EA +K
Sbjct: 731 EATKK 735
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGN-VSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+E+ R+FVR LP TE + R+HFS G V++V ++ + I YV Y PE A+
Sbjct: 1 METSRIFVRGLPPKITEADFRQHFSAGGREVTDVKVIPQRR------IGYVGYKTPEVAA 54
Query: 355 RAIEVLDNSIFQGRLLHVMPAR 376
+A++ + S + ++V AR
Sbjct: 55 KAVKYFNKSYIRMSRINVELAR 76
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ +L + +R FAF F T +EAE A+
Sbjct: 721 TKIVIKNLPFEATKKDIRTLFGTYGQLRAVRLPKKFGNSTRGFAFAEFVTPREAENALNA 780
Query: 61 FNKSYLDTCRI 71
++L R+
Sbjct: 781 LRDTHLLGRRL 791
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
++KNLP+++++ ++ +FG +G L V LP ST+ A F+ P EA A L
Sbjct: 723 IVIKNLPFEATKKDIRTLFGTYGQLRAVRLPKKFGNSTRGFAFAEFVTPREAENALNALR 782
Query: 552 YKRYKGVPLYLEW 564
G L L++
Sbjct: 783 DTHLLGRRLVLDY 795
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ +V++ K N + GF F EF + A N
Sbjct: 723 IVIKNLPFEATKKDIRTLFGTY---GQLRAVRLPKKFGNS---TRGFAFAEFVTPREAEN 776
Query: 678 VCRDLQGTILDGHALIL 694
L+ T L G L+L
Sbjct: 777 ALNALRDTHLLGRRLVL 793
>gi|158256324|dbj|BAF84133.1| unnamed protein product [Homo sapiens]
gi|189054403|dbj|BAG37176.1| unnamed protein product [Homo sapiens]
Length = 960
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 180/488 (36%), Positives = 277/488 (56%), Gaps = 55/488 (11%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +++K Q +L ESGRLFVRNLPYT+TE++L + FSK+G +SE+H
Sbjct: 375 GAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYP 434
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A++ + PE A +A +D +FQGR+LHV+P+ KK + + ++++
Sbjct: 435 IDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKKEASE----DASA 490
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ AS + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 491 LGSSSYKKKKEAQDKANSASSHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSV 548
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 549 AVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAE 602
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L + FG FGSL +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 603 LQETFGHFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVGVF 662
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR------------------ 612
S ++ K + D + A E +G T D +P
Sbjct: 663 SSTAPQK-KKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEEE 721
Query: 613 -----VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGF 666
+ +LF+KNLNF T +E L++ F K G + S + KK K G +SMGFGF
Sbjct: 722 EEEESLPGCTLFIKNLNFDTTEEKLKEVFS---KVGTVKSCSISKKKNKAGVLLSMGFGF 778
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRN 722
+E+ E A + LQG ++DGH L +++ V K+ + ++++K+LVRN
Sbjct: 779 VEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRN 838
Query: 723 VAFEAQRK 730
+ F+A +
Sbjct: 839 IPFQAHSR 846
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 196/391 (50%), Gaps = 45/391 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A K+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P + +KK
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVA 121
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKGGEK 174
+EK+ E D + EFL V Q R ++ WAND L + K+K S+ ++ G++
Sbjct: 122 GQLEKLKE--DTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQE 179
Query: 175 SITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSR-VKKDWSDSESEDDSAGDD 233
S + + + + +A+ + K A EL SDMDY KS+ VK S S E++S +
Sbjct: 180 S-----EEEGAGEDLEEEASLEPKAAVQKEL-SDMDYLKSKMVKAGSSSSSEEEESEDEA 233
Query: 234 DDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANGEIVDPG 282
D+G E EEE++ ++++ G G+E +A E P
Sbjct: 234 VHCDEGSEAEEEDSS--------ATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPA 285
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
N Q+E + +R P+ TE + E + V+ + IV + ++ G
Sbjct: 286 N--------QKEPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVA-IRIVRNAHGNKT-GY 335
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
+V ++ E +A++ + GR + V
Sbjct: 336 IFVDFSNEEEVKQALKC-NREYMGGRYIEVF 365
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 129/336 (38%), Gaps = 69/336 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP EL+E F FG++ V + T A V + P A +A L
Sbjct: 589 ILVKNLPAGTLAAELQETFGHFGSLGRVLLPEGGIT------AIVEFLEPLEARKAFRHL 642
Query: 361 DNSIFQGRLLHVMPAR----HKKSSDKQELHNSTSQG---------TKTLKQRREEERKA 407
S F L++ A + K++L ++ S+ T + E+E
Sbjct: 643 AYSKFHHVPLYLEWAPVGVFSSTAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPT 702
Query: 408 SEASGNTKA-----------------WNSLFMRP---DTVVEN---IARKHGVSKSDLLD 444
E + N+ A +LF++ DT E + K G KS +
Sbjct: 703 EEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSIS 762
Query: 445 REANDLAVRIALG----ETQVIAETKKALTNAGVNVS-------SLEEFSAGKTDGLKRS 493
++ N V +++G E + + +KAL +V + E + L R
Sbjct: 763 KKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARK 822
Query: 494 NHV--------FLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFL 538
V LV+N+P+ + E+ ++F FG L V LP T V FL
Sbjct: 823 KQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFL 882
Query: 539 EPVEAAAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
+A AF L + + G L LEWA S+V Q+
Sbjct: 883 TKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQA 918
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
>gi|5912081|emb|CAB55987.1| hypothetical protein [Homo sapiens]
Length = 960
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/488 (36%), Positives = 277/488 (56%), Gaps = 55/488 (11%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +++K Q +L ESGRLFVRNLPYT+TE++L + FSK+G +SE+H
Sbjct: 375 GAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYP 434
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A++ + PE A +A +D +FQGR+LHV+P+ KK + + ++++
Sbjct: 435 IDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKKEASE----DASA 490
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ AS + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 491 LGSSSYKKKKEAQDKANSASSHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSV 548
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 549 AVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAE 602
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L + FG FGSL +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 603 LQETFGHFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVGVF 662
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR------------------ 612
S ++ K + D + A E +G T D +P
Sbjct: 663 SSTAPQK-KKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEEE 721
Query: 613 -----VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGF 666
+ +LF+KNLNF T +E L++ F K G + S + KK K G +SMGFGF
Sbjct: 722 EEEESLPGCTLFIKNLNFDTTEEKLKEVFS---KVGTVKSCSISKKKNKAGVLLSMGFGF 778
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRN 722
+E+ E A + LQG ++DGH L +++ V K+ + ++++K+LVRN
Sbjct: 779 VEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRN 838
Query: 723 VAFEAQRK 730
+ F+A +
Sbjct: 839 IPFQAHSR 846
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 196/391 (50%), Gaps = 45/391 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A K+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P + +KK
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVA 121
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKGGEK 174
+EK+ E D + EFL V Q R ++ WAND L + K+K S+ ++ G++
Sbjct: 122 GQLEKLKE--DTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQE 179
Query: 175 SITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSR-VKKDWSDSESEDDSAGDD 233
S + + + + +A+ + K A EL SDMDY KS+ VK S S E++S +
Sbjct: 180 S-----EEEGAGEDLEEEASLEPKAAVQKEL-SDMDYLKSKMVKAGSSSSSEEEESEDEA 233
Query: 234 DDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANGEIVDPG 282
D+G E EEE++ ++++ G G+E +A E P
Sbjct: 234 VHCDEGSEAEEEDSS--------ATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPA 285
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
N Q+E + +R P+ TE + E + V+ + IV + ++ G
Sbjct: 286 N--------QKEPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVA-IRIVRNAHGNKT-GY 335
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
+V ++ E +A++ + GR + V
Sbjct: 336 IFVDFSNEEEVKQALKC-NREYMGGRYIEVF 365
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP T V FL +A
Sbjct: 828 KQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDA 887
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKR--ALLEQQL 600
AF L + + G L LEWA S+V Q+ QK A E K+ +L++ L
Sbjct: 888 KRAFNALCHSTHLYGRRLVLEWADSEVTLQAL----RQKTAAHFHEPPKKKRSVVLDEIL 943
Query: 601 EGVTDADID 609
E + +D D
Sbjct: 944 EQLEGSDSD 952
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
>gi|66475966|ref|XP_627799.1| 5x RRM. Mrd1p like, splicing related [Cryptosporidium parvum Iowa
II]
gi|32399047|emb|CAD98287.1| RNA-binding domain protein [Cryptosporidium parvum]
gi|46229208|gb|EAK90057.1| 5x RRM. Mrd1p like, splicing related [Cryptosporidium parvum Iowa
II]
Length = 806
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 234/781 (29%), Positives = 394/781 (50%), Gaps = 121/781 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGK------SRQFAFIGFRTEQE 53
SRI +KNLP Y++E RL+D S G ITD K+++ + K SR+F F+GF +E++
Sbjct: 17 SRIIIKNLPSYLSEKRLKDHISSIGCNITDVKIVKKRSEKNPEVESSRKFGFVGFYSEED 76
Query: 54 AEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKE--------KEVSE-DEK 104
A++ ++YFN +++DTCRI+ + A G +PRPWS+YS+ KE +E DEK
Sbjct: 77 AKKVLEYFNGTFIDTCRINVQYAFPPGSDLLPRPWSKYSIGSSQYNRRNNIKENTEVDEK 136
Query: 105 NPVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWA-------NDTLIGLMADQ 157
P+ +K DD + F + + + +K W N+ + + D
Sbjct: 137 EPITLSKE------------DDSKKENFKKWISQKNSNKSWLDSADLIDNNEINSVKNDS 184
Query: 158 KAKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVK 217
K+S I + K G ++ H++ ++S++ +S + + SD D
Sbjct: 185 SVKISSEIVKPTKAGVSNVRKHIQ------FSESESEPESDSDPDPDQNSDQD------- 231
Query: 218 KDWSDSESEDDSAGDDDDDDD---GEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDA 274
SE + ++ ++DD+ E + E++ + D N+E +
Sbjct: 232 -----SELKHETFNENDDNSSTNVSESDLSSESNTDSDDNQELE---------------- 270
Query: 275 NGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDK 334
E+VD G + + +E+ RL V N+ Y+ TE++L + FSK+G V V+I+
Sbjct: 271 --EVVDIG------EQIVTSPMETSRLMVVNISYSTTEEDLNKFFSKWGEVKSVNIIRSP 322
Query: 335 DTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGT 394
++ SKG +V Y E A A+ S+ GR+L V PA +K + + N ++
Sbjct: 323 ESGVSKGYGFVQYEFVEHAVSALSQAHLSLLHGRVLRVSPAFNKPTKTITDSFNESNVIV 382
Query: 395 KT-LKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVR 453
+ K + +RK E+S + K WN L++ ++ V V K D++D +A DLA R
Sbjct: 383 HSDYKLKALNKRK--ESSIDKKTWNLLYISGNSAVNAFIDNEDVKKHDIVDIQAPDLASR 440
Query: 454 IALGETQVIAETKKALTNAGVNVSSLEE-----FSAG-KTDGLK---RSNHVFLVKNLPY 504
++L ET VI+ TK+ L G++V + E F+A K +G+K RS ++K+LP
Sbjct: 441 VSLMETHVISATKEWLKKEGISVKAFEVEGSDIFTAKLKFEGVKNVERSKDTIIIKHLPS 500
Query: 505 DS-SEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLE 563
D + +L K+ FG ++++ L +KT+A+V FLE A +AFK LA+KR+K VPLY+E
Sbjct: 501 DQVTLSDLQKICSPFGRINRLCLSPSKTIAIVQFLEESSAESAFKRLAFKRFKSVPLYIE 560
Query: 564 WAPSDV-LSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKN 622
WAP ++ +S++ T K + VV + + + D + D D + +FVKN
Sbjct: 561 WAPVNLFVSETETQKEKETESKVVNKKE------------ILDINEDLDNTNAVHVFVKN 608
Query: 623 LNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNV---SMGFGFIEFDSVETATNVC 679
L+F T ++ L F + ++ R ++ +K H + N+ SMG+GF+EF + E A
Sbjct: 609 LSFDTTNKALENLFSK-VEGFRKATITMKTHSDSDGNIIKKSMGYGFLEFKTSENAKECI 667
Query: 680 RDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS-----------STKLLVRNVAFEAQ 728
+ +Q LDGH L L++ K QV +K S KLL++N+ F+A
Sbjct: 668 KRMQSVTLDGHTLELKISKKSKTSQVDEKTSLPYGSQLTDIGVKNVSNKLLIKNLPFQAT 727
Query: 729 R 729
+
Sbjct: 728 K 728
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ +KNLP T+ + F+ G +T ++ + DG ++ + FI F + EA A++
Sbjct: 715 NKLLIKNLPFQATKSDIMSLFNSVGTVTSIRIPKKSDGTNKGYCFIEFLGKLEAISALEQ 774
Query: 61 FNKSYLDTCRISCEIA 76
F ++L + E+A
Sbjct: 775 FQHTHLYGRHLIIEVA 790
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 489 GLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEA 543
G+K ++ L+KNLP+ +++ ++ +F G++ + +P + K + FL +EA
Sbjct: 709 GVKNVSNKLLIKNLPFQATKSDIMSLFNSVGTVTSIRIPKKSDGTNKGYCFIEFLGKLEA 768
Query: 544 AAAFKGLAYKRYKGVPLYLEWAPSD 568
+A + + G L +E A +D
Sbjct: 769 ISALEQFQHTHLYGRHLIIEVAEND 793
>gi|258565855|ref|XP_002583672.1| multiple RNA-binding domain-containing protein 1 [Uncinocarpus
reesii 1704]
gi|237907373|gb|EEP81774.1| multiple RNA-binding domain-containing protein 1 [Uncinocarpus
reesii 1704]
Length = 772
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 238/764 (31%), Positives = 371/764 (48%), Gaps = 91/764 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D LR F+ + E+TDA ++ +R+ F+GF+ A+ A+ Y
Sbjct: 4 TRVFVSGLPPTLNNDGLRKHFAGRFEVTDAHII-----PNRRIGFVGFKDHNSAQNAVNY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSED-EKNPVLAAKRGEKKTIE 119
FNK+++ +I+ E+AR V P + K K + + NP + + ++ T E
Sbjct: 59 FNKTFIKMSKIAVEMARPVDA----APEVKLKQKPGKASANGADPNPQSDSLKRKRDTGE 114
Query: 120 KVTENDDPQLLEFLQVMQPRVKSKMWAN---DTLIGLMA----DQKAKVSENISQAIKGG 172
DDP+L E+L MQ KSK WA+ D IGL A Q S N+ G
Sbjct: 115 -----DDPKLEEYLNAMQASRKSKTWADTGTDLTIGLAARNNKSQDVDSSINVPNKRTKG 169
Query: 173 EKSITLHVKSDKSNVITDSQATEKSKNAAAD--------------ELMSDMDYFKSRVKK 218
+ L ++ ++ V + ++ N A SD D+ +SR +
Sbjct: 170 PLEVELPKEAPRNLVPSTTEPNPAELNHKAQVDAEDAEDAEDSEAAPQSDADWLRSRTSR 229
Query: 219 DWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANG-- 276
+ D++D D + + D+ E S D V ED N
Sbjct: 230 LLGLLD-------DEEDIDHTKAPADSPTSPPADAQPEPISRQPDP---PVQAEDQNSPS 279
Query: 277 --EIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDK 334
E+ DP + E+GRLF+RNLPY TE++LR F++FG + E+H+ D
Sbjct: 280 VQEVDDPN---------LHLIRETGRLFLRNLPYNTTEEDLRSLFTRFGKIEELHVAFDT 330
Query: 335 DTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGT 394
SKG AY + P+SA A + LD FQGRL+H++PA KK+ E S
Sbjct: 331 RHSTSKGFAYAQFVDPDSAIEAYKELDGRDFQGRLMHILPASSKKTYKINEYELSKL--- 387
Query: 395 KTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRI 454
LK++++ +RKA EA+ +T +WNSL+M D V+ ++A + GV KS +LD ++D AV+
Sbjct: 388 -PLKKQQQIKRKA-EAASSTFSWNSLYMNADAVMTSVAERLGVPKSAILDPTSSDAAVKQ 445
Query: 455 ALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKM 514
A ET VI ETK + GVN+ S ++ +R N LVKN + +L K+
Sbjct: 446 AHAETHVIQETKAYFSANGVNLDSFKQ--------RERGNTAILVKNFSFGVKAEDLKKL 497
Query: 515 FGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
F +G + ++++P T T+A+V F P E AF+GLAY++ L+LE AP D+
Sbjct: 498 FDPYGQIIRLLMPPTGTIAIVEFSMPDECQKAFRGLAYRKLGDSILFLEKAPKDLFEGKP 557
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRK 634
+ + VVG + + G +A VES +L+V+NLNF T L
Sbjct: 558 MAPVTVQPQRVVGPTFSTSETFK---AGEQEAG-----VESSTLYVRNLNFSTTTVGLTD 609
Query: 635 HFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHA 691
F +G LS +VK K G+ +SMGFGF+EF + A + G LD H
Sbjct: 610 LFKPL--DG-FLSAQVKTKPDPKKPGERLSMGFGFVEFKTKAQAQAALAAMNGYKLDQHE 666
Query: 692 LILQLCHAKKD--EQVVKKAEKDKSS---TKLLVRNVAFEAQRK 730
L+++ H D EQ ++ K++ TK++++N+ F+A +K
Sbjct: 667 LVIKPSHKGMDAAEQQRREDTAKKNAARRTKIIIKNLPFQATKK 710
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ ++++ FG + G++ S++V K + GF F +F S A N
Sbjct: 698 IIIKNLPFQATKKDIQSLFGAY---GQLRSLRVPKKFDR---TARGFAFADFVSAREAEN 751
Query: 678 VCRDLQGTILDGHALILQLC 697
L+ T L G L+L +C
Sbjct: 752 AMDALRNTHLLGRRLVLGVC 771
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 25/141 (17%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+FV LP T D LR+HF+ V++ HI+ ++ I +V + SA
Sbjct: 1 MESTRVFVSGLPPTLNNDGLRKHFAGRFEVTDAHIIPNRR------IGFVGFKDHNSAQN 54
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSD----KQELHNSTSQG------TKTLKQRR---- 401
A+ + + + + V AR ++ KQ+ +++ G + +LK++R
Sbjct: 55 AVNYFNKTFIKMSKIAVEMARPVDAAPEVKLKQKPGKASANGADPNPQSDSLKRKRDTGE 114
Query: 402 -----EEERKASEASGNTKAW 417
EE A +AS +K W
Sbjct: 115 DDPKLEEYLNAMQASRKSKTW 135
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ ++ F G++ ++ + D +R FAF F + +EAE A+
Sbjct: 696 TKIIIKNLPFQATKKDIQSLFGAYGQLRSLRVPKKFDRTARGFAFADFVSAREAENAMDA 755
Query: 61 FNKSYLDTCRI 71
++L R+
Sbjct: 756 LRNTHLLGRRL 766
>gi|255941010|ref|XP_002561274.1| Pc16g09620 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585897|emb|CAP93632.1| Pc16g09620 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 835
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 234/781 (29%), Positives = 385/781 (49%), Gaps = 108/781 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D+L+ F+ + ++TDA ++ R+ F+GF++ + A++A+K+
Sbjct: 4 TRVFVGGLPPTCSNDQLKKHFATRFQVTDAHVL-----PKRRMGFVGFKSHEAAQQAVKH 58
Query: 61 FNKSYLDTCRISCEIARKV--GDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTI 118
FNK+Y+ +I+ +IAR + D P R K + + S D N + + GEKK
Sbjct: 59 FNKTYMKMSKIAVDIARPIDSNDAEDAHPTRRRDTKNDNDASVD--NNLKRKRDGEKKP- 115
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWAND-TLIGLMAD------QKAKVSENISQAIKG 171
DP+L E+L +M K++ WAND +I D Q A+ E+I
Sbjct: 116 ------QDPKLQEYLSLMGSSSKTRTWANDDEMIKPSVDTVPVINQPAQEQEDIQDLPSH 169
Query: 172 GEKSITLHVKSDKSNVITDSQATEK----------------SKNAAADEL----MSDMDY 211
+K+ K++K ++ ++ E +N+A E+ +SD D+
Sbjct: 170 PKKA-----KTEKPPMVAKAEQPEPMAIDKGEEEEVQETPEQENSAEPEVDTRPISDEDW 224
Query: 212 FKSRVKKDWSDSESEDDSAGDDDDD---DDGEEEEEEENDHNGDSNEECDSIIKDSIHSG 268
+S+ + + E+ D + +GD + + D + +
Sbjct: 225 LRSKTSRLLGLLDEEEQEEFDQQKAVAATTAPTKAVSPPSASGDESPQRDEESRTAAIEK 284
Query: 269 VGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEV 328
+ + + + P + D+ + S RLF+RNL Y TE +L+ F +FG + E+
Sbjct: 285 IAPNTTDVDSITEATPEDPNIDL---IRNSARLFLRNLAYDTTESDLQPIFERFGKIEEI 341
Query: 329 HIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQEL 386
H+ D + SKG AYV Y ++A A + LD FQGRLLH++PA KK+ D+ EL
Sbjct: 342 HVAFDTRSTTSKGFAYVQYCDADAAVDAYQTLDGKHFQGRLLHILPASAKKTYKIDEYEL 401
Query: 387 HNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE 446
LK++RE +RK + ASG+T +WNSL+M D V+ ++A + GVSKS+LLD
Sbjct: 402 SKL------PLKKQREIKRKQN-ASGSTFSWNSLYMNADAVMSSVAGRLGVSKSELLDPT 454
Query: 447 ANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDS 506
++D AV+ A ET VI ETK + GVN+ + ++ +R N LVKN Y
Sbjct: 455 SSDAAVKQAHAETHVIQETKAYFASNGVNIDAFKQ--------RERGNTAILVKNFSYGV 506
Query: 507 SEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAP 566
+ EL +F +G + ++++P + T+A+V F +P EA AFKG+AY++ L+LE AP
Sbjct: 507 TSAELRSLFDPYGKIIRLLMPPSGTIAIVEFAQPDEAQKAFKGMAYRKLGDSILFLEKAP 566
Query: 567 SDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQL---EGVTDADI----DP-DRVESRSL 618
++ S+ A RAL + +G + AD +P D V + +L
Sbjct: 567 KNLFDGSA----------------APRALAPETRGKDQGFSTADTFAADEPDDSVGTTTL 610
Query: 619 FVKNLNFKTCDENLRKHFG--EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
FVKNLNF T +E + F + GRI + K + G+ +SMGF F +F + A
Sbjct: 611 FVKNLNFSTTNEKFLEVFRPLDGFITGRIKTKPDPK--RPGQTLSMGFAFADFKTKAQAQ 668
Query: 677 NVCRDLQGTILDGHALILQLCHAKKD-------EQVVKKAEKDKSSTKLLVRNVAFEAQR 729
+ G LD H L+++ H KD E KK + TK++++N+ F+A +
Sbjct: 669 AALAAMNGYKLDQHELLVRASHKGKDAAEERRREDTAKKVAARR--TKIIIKNLPFQATK 726
Query: 730 K 730
K
Sbjct: 727 K 727
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 26/142 (18%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+FV LP T + D+L++HF+ V++ H++ KR G +V + E+A +
Sbjct: 1 MESTRVFVGGLPPTCSNDQLKKHFATRFQVTDAHVL----PKRRMG--FVGFKSHEAAQQ 54
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTK---------TLKQRREEERK 406
A++ + + + + V AR S+D ++ H + + TK LK++R+ E+K
Sbjct: 55 AVKHFNKTYMKMSKIAVDIARPIDSNDAEDAHPTRRRDTKNDNDASVDNNLKRKRDGEKK 114
Query: 407 ASE-----------ASGNTKAW 417
+ +S T+ W
Sbjct: 115 PQDPKLQEYLSLMGSSSKTRTW 136
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V + + + GFGF +F S A N
Sbjct: 715 IIIKNLPFQATKKDIRSLFGAY---GQLRSVRVPQKFDHS---ARGFGFADFVSAREAEN 768
Query: 678 VCRDLQGTILDGHALILQLCH 698
L+ T L G L+L+ +
Sbjct: 769 AMDALKNTHLLGRRLVLEFVN 789
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R F F F + +EAE A+
Sbjct: 713 TKIIIKNLPFQATKKDIRSLFGAYGQLRSVRVPQKFDHSARGFGFADFVSAREAENAMDA 772
Query: 61 FNKSYLDTCRISCEI 75
++L R+ E
Sbjct: 773 LKNTHLLGRRLVLEF 787
>gi|226497574|ref|NP_057280.2| probable RNA-binding protein 19 [Homo sapiens]
gi|226497654|ref|NP_001140170.1| probable RNA-binding protein 19 [Homo sapiens]
gi|226497734|ref|NP_001140171.1| probable RNA-binding protein 19 [Homo sapiens]
gi|308153566|sp|Q9Y4C8.3|RBM19_HUMAN RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
Length = 960
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 179/488 (36%), Positives = 277/488 (56%), Gaps = 55/488 (11%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +++K Q +L ESGRLFVRNLPYT+TE++L + FSK+G +SE+H
Sbjct: 375 GAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYP 434
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A++ + PE A +A +D +FQGR+LHV+P+ KK + + ++++
Sbjct: 435 IDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKKEASE----DASA 490
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ AS + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 491 LGSSSYKKKKEAQDKANSASSHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSV 548
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + +
Sbjct: 549 AVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAQ 602
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L + FG FGSL +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 603 LQETFGHFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVGVF 662
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR------------------ 612
S ++ K + D + A E +G T D +P
Sbjct: 663 SSTAPQK-KKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEEE 721
Query: 613 -----VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGF 666
+ +LF+KNLNF T +E L++ F K G + S + KK K G +SMGFGF
Sbjct: 722 EEEESLPGCTLFIKNLNFDTTEEKLKEVFS---KVGTVKSCSISKKKNKAGVLLSMGFGF 778
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRN 722
+E+ E A + LQG ++DGH L +++ V K+ + ++++K+LVRN
Sbjct: 779 VEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRN 838
Query: 723 VAFEAQRK 730
+ F+A +
Sbjct: 839 IPFQAHSR 846
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 196/391 (50%), Gaps = 45/391 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A K+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P + +KK
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVA 121
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKGGEK 174
+EK+ E D + EFL V Q R ++ WAND L + K+K S+ ++ G++
Sbjct: 122 GQLEKLKE--DTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQE 179
Query: 175 SITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSR-VKKDWSDSESEDDSAGDD 233
S + + + + +A+ + K A EL SDMDY KS+ VK S S E++S +
Sbjct: 180 S-----EEEGAGEDLEEEASLEPKAAVQKEL-SDMDYLKSKMVKAGSSSSSEEEESEDEA 233
Query: 234 DDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANGEIVDPG 282
D+G E EEE++ ++++ G G+E +A E P
Sbjct: 234 VHCDEGSEAEEEDSS--------ATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPA 285
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
N Q+E + +R P+ TE + E + V+ + IV + ++ G
Sbjct: 286 N--------QKEPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVA-IRIVRNAHGNKT-GY 335
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
+V ++ E +A++ + GR + V
Sbjct: 336 IFVDFSNEEEVKQALKC-NREYMGGRYIEVF 365
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP T V FL +A
Sbjct: 828 KQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDA 887
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 888 KRAFNALCHSTHLYGRRLVLEWADSEVTLQA 918
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
>gi|326485490|gb|EGE09500.1| pre-rRNA processing protein Mrd1 [Trichophyton equinum CBS 127.97]
Length = 835
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 247/796 (31%), Positives = 378/796 (47%), Gaps = 137/796 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP +T D+LR F+Q+ E+TDA ++ +R+ F+GF+ AE A+KY
Sbjct: 4 TRVFVSGLPPSLTSDKLRHHFAQRFEVTDAHVI-----PNRRIGFVGFKGPDLAENAVKY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNK++++ +IS E+AR V N +RY K ++ + P L KR + T E
Sbjct: 59 FNKTFINMSKISVEMARPVDADNSDDLRARY----RKHLNAKKDPPSLKRKRDTQDTEE- 113
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLHV 180
D +L E+L MQP KS+ WA+ G + + S I A + E +
Sbjct: 114 -----DEKLQEYLTAMQPPTKSRTWADS---GAIPTAHQEQSPAIDAAEEPTEDKDDTEM 165
Query: 181 KSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGE 240
+ ++ VI ++K+ D ++ + + DW S++ DD+D+
Sbjct: 166 HNVETAVIDIPVTQPETKSDDVDAANANEENLVQQNDDDWLRSKTSRLLGLLDDEDEMAA 225
Query: 241 EEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSS------------- 287
E G EDA + P SS+
Sbjct: 226 E-----------------------TWKGKPSEDARDQPPVPAKTSSTKAAAEEEESVPEP 262
Query: 288 SKDVQQEVLE-SGRLFVRNLPYTATEDELREHFSKFGNVSEV------------------ 328
D E + +GRLF+RNLPY A+ED+L FS+FG + EV
Sbjct: 263 PPDANIESIRLTGRLFIRNLPYNASEDDLNAAFSRFGKIEEVRFPKFSPYPPYNQPIVYM 322
Query: 329 -------------------HIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRL 369
H+ D SKG AY+ YA ++A A + LD FQGRL
Sbjct: 323 MIILIGTSDASHMMLPGRTHVATDTRHSTSKGFAYIQYAESDAAIEAYKQLDGKDFQGRL 382
Query: 370 LHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVE 429
+H++PA KK+ E S LK++++ +RKA EA+ +T +WNSL+M D V+
Sbjct: 383 MHILPASSKKTYKLDEFEISKL----PLKKQQQIKRKA-EAASSTFSWNSLYMNTDAVMA 437
Query: 430 NIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDG 489
++A + GVSKS LLD ++D AV+ A ET VI ETK + GV++ S ++
Sbjct: 438 SVADRLGVSKSQLLDPTSSDAAVKQAHAETHVIQETKAYFSANGVHIESFKQ-------- 489
Query: 490 LKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKG 549
+R N L+KN Y S ++ K+ FG L ++++P + T+A+V F P EA AFKG
Sbjct: 490 RERGNTALLLKNFTYGVSSEDIRKLCEPFGQLTRLLMPPSGTIAIVEFAMPDEALRAFKG 549
Query: 550 LAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQL--EGVTDAD 607
LAYKR LY+E AP ++ G +LL Q++ +G + +D
Sbjct: 550 LAYKRIGDSILYVEKAPKNLFEG--------------GPPVTMPSLLNQKVVSQGFSTSD 595
Query: 608 I----DPD-RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKN 659
+P+ +ES +LFV+NLNF T D L F +G +S +VK K G+
Sbjct: 596 TFKADEPEAPMESATLFVRNLNFTTTDAGLSDLF--RPLDG-FISAQVKTRPDPKKPGER 652
Query: 660 VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD--EQVVKKAEKDKSS-- 715
+SMGFGF+EF S A + L G LD H L+++ H D EQ ++ K S
Sbjct: 653 LSMGFGFVEFKSRAQAEAALKALNGYKLDQHELVIKPSHKGMDAAEQRRREDNTKKVSAK 712
Query: 716 -TKLLVRNVAFEAQRK 730
TK++++N+ F+A +K
Sbjct: 713 RTKIIIKNLPFQATKK 728
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E R+FV LP + T D+LR HF++ V++ H++ ++ I +V + P+ A
Sbjct: 1 MEGTRVFVSGLPPSLTSDKLRHHFAQRFEVTDAHVIPNRR------IGFVGFKGPDLAEN 54
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQEL------HNSTSQGTKTLKQRREEE 404
A++ + + + V AR + + +L H + + +LK++R+ +
Sbjct: 55 AVKYFNKTFINMSKISVEMARPVDADNSDDLRARYRKHLNAKKDPPSLKRKRDTQ 109
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ + F+ G++ ++ + D +R FAF F + +EAE A+
Sbjct: 714 TKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPKKFDRTARGFAFADFVSSREAENAMDA 773
Query: 61 FNKSYLDTCRISCE-IARKVGDP 82
++L R+ E ++ + DP
Sbjct: 774 LRNTHLLGRRLVLEFVSEEATDP 796
>gi|291232095|ref|XP_002735981.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Saccoglossus kowalevskii]
Length = 861
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 258/820 (31%), Positives = 405/820 (49%), Gaps = 158/820 (19%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VKNLPK + E++ ++ FS++GEITD +L TKDG R+F FIG++T +A+ ++K+
Sbjct: 2 SRIIVKNLPKGMKEEKFKNLFSERGEITDVQLKYTKDGIFRRFGFIGYKTATQAKSSMKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS--------LKKEKEV-----SEDEKNPV 107
FN +++DT +IS +IA + D N+PRPWS+YS + KE+E S+DE P
Sbjct: 62 FNGTFIDTSKISVQIAMNLTDDNLPRPWSKYSQRQKIQDKITKEREKESGKKSQDENQP- 120
Query: 108 LAAKRGEKKTIEKVTEND-DPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENIS 166
+ KK ++ E D DP EFL+ + R + W ND ++ D+K+ EN
Sbjct: 121 ----KKTKKKLQLFEELDEDPIFQEFLETHKTRSTVQAWTNDAMV-TTQDKKSSKDENKQ 175
Query: 167 QAIKGGEKSITLHVKSDKSNVI-------TDSQATEKSKNAAADELMSDMDYFKSR-VKK 218
+ +K + V+SD + +++ +KS A D +SDMDY +S+ VK
Sbjct: 176 KDVKYDD-----DVQSDDEEIFDPIAGKVEETKKEKKSTKPAKD--LSDMDYLRSKMVKS 228
Query: 219 DWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEI 278
D SEDD+ E ++E ++ K+ + G+ GE
Sbjct: 229 DLVQDASEDDA------------ETKDEKKPPSGKKKKKKRKKKNKSAAARGK-IPKGEF 275
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTK- 337
V + +R +P+ +E E+ E F+ V +HIV +K+ K
Sbjct: 276 V---------------------IEMRGIPFYCSEKEISEFFAPI-EVVAIHIVKNKNGKQ 313
Query: 338 -------------------------RSKGIAYVLYA------------------IPESAS 354
R + I LY + + A
Sbjct: 314 LGFARVELKNENDLKEAMTRHKDYMRGRCIEIALYEAVDDFDPSKVKTGDDKPWMKKVAE 373
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT 414
A E D I +GR+LH++PA+ K + + + S +++++ K SG++
Sbjct: 374 NADENQDERIAEGRMLHILPAKEKIIDEPNDGDDRESS------YKKKKKAKDKALSGSS 427
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALTNAG 473
WNSLF+ + V + IA K KSD+LD E N LAVR+ALGETQ+++ET++ L + G
Sbjct: 428 HNWNSLFIAANAVADAIADKFDTLKSDVLDAEGTNSLAVRMALGETQIVSETRQFLLDNG 487
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
V++ S + +A RS+ V LVKNLP + EL +F KFG L +++LP
Sbjct: 488 VSLDSFSQAAA------PRSSTVILVKNLPAATLPEELRHVFSKFGELGRILLPPAGVTG 541
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKR 593
+V FLE EA AF+ LAY +++ VPLYLEWAP + + + K K++ + D ++
Sbjct: 542 IVEFLETNEAKLAFRKLAYTKFQHVPLYLEWAPVGIFTTPAEKKEGIKDELMAS--DKEQ 599
Query: 594 ALLEQQLEGVTDADIDPDRVESR-----SLFVKNLNFKTCDENLRKHFG-----EHIKEG 643
+ E + E VT+ + + E +LFVKNLNF+T + + + F +H+
Sbjct: 600 STTEGKKEDVTEQEDEESSSEDEIEEGCTLFVKNLNFETTETGVIEKFSVCGPVKHV--- 656
Query: 644 RILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ------- 695
S+ KK +K GK +SMG+GF+E+ + E+A + LQ +LD H + L+
Sbjct: 657 ---SISKKKDMKQPGKFLSMGYGFVEYKNRESANKALKVLQHCMLDDHQVELKMSNRATV 713
Query: 696 ----LCHAKKDEQVVKK-AEKDKSSTKLLVRNVAFEAQRK 730
L H K KK K + STK+LVRN+ FEA R+
Sbjct: 714 QSLLLFHRPKPTSTRKKQVTKKQKSTKILVRNLPFEATRR 753
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
P+S+ K + +S ++ VRNLP+ AT E++E FS FG + + I K + +G
Sbjct: 724 PTSTRKKQVTKKQKSTKILVRNLPFEATRREIQELFSTFGEIKSIRI-PKKASGTHRGFG 782
Query: 344 YVLYAIPESASRAIEVLDNSI-FQGRLL 370
+V + + A RA L +S GR L
Sbjct: 783 FVDFLTKQDAKRAFSALCHSTHLYGRRL 810
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
LV+NLP++++ E+ ++F FG + + +P + + V FL +A AF L +
Sbjct: 742 LVRNLPFEATRREIQELFSTFGEIKSIRIPKKASGTHRGFGFVDFLTKQDAKRAFSALCH 801
Query: 553 KRY-KGVPLYLEWAPSD 568
+ G L LEWA +D
Sbjct: 802 STHLYGRRLVLEWADTD 818
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
++I V+NLP T +++ FS GEI ++ + G R F F+ F T+Q+A+ A
Sbjct: 739 TKILVRNLPFEATRREIQELFSTFGEIKSIRIPKKASGTHRGFGFVDFLTKQDAKRAF 796
>gi|380818506|gb|AFE81126.1| putative RNA-binding protein 19 [Macaca mulatta]
gi|383412169|gb|AFH29298.1| putative RNA-binding protein 19 [Macaca mulatta]
Length = 960
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/466 (37%), Positives = 270/466 (57%), Gaps = 45/466 (9%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
++ ESGRLFVRNLPYT+TE++L + FSK+G +SE+H +D TK+ KG A+V + PE A
Sbjct: 397 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 456
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
+A +D +FQGR+LHV+P+ KK + + ++++ G+ + K+++E + KA+ S +
Sbjct: 457 VKAYSEVDGQVFQGRMLHVLPSTIKKEASE----DASALGSSSYKKKKEAQDKATSTSSH 512
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALTNA 472
WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++ L +
Sbjct: 513 N--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLIDN 570
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL 532
GV++ S + +A +RS V LVKNLP + EL + FG+FGSL +V+LP
Sbjct: 571 GVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT 624
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V S ++ K + D + +
Sbjct: 625 AIVEFLEPLEARRAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQK-KKLQDTPLEPAEKD 683
Query: 593 RALLEQQLEGVTDADIDPDR-----------------------VESRSLFVKNLNFKTCD 629
A E +G + D +P + +LF+KNLNF T +
Sbjct: 684 EAEPETVPDGESPEDENPTEEGVDNSSANMEEEEEEEEEEEESLPGCTLFIKNLNFDTTE 743
Query: 630 ENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILD 688
E L+ F K G + S + KK K G +SMGFGF+E+ E A + LQG I+D
Sbjct: 744 EKLKGVFS---KVGTVKSCSISKKKNKTGALLSMGFGFVEYRKPEQAQKALKQLQGHIVD 800
Query: 689 GHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEAQRK 730
GH L +++ V K+ + ++++K+LVRN+ F+A +
Sbjct: 801 GHKLEVRISERATKPAVTSARKKQVPRTQTTSKILVRNIPFQAHSR 846
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 189/397 (47%), Gaps = 57/397 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A+K+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKALKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P + +KK
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVA 121
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
+EK+ E D + EFL V Q R ++ WAND L + K+K + +
Sbjct: 122 GQLEKLKE--DTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDY---------- 169
Query: 176 ITLHVKSDKSNVITDSQATEKSKNAAADEL-------MSDMDYFKSR-VKKDWSDSESED 227
L+ SD + A E + A EL +SDMDY KS+ VK S S E+
Sbjct: 170 --LNFDSDSGQESEEEGAGEDLEEEAGLELKAAVQKELSDMDYLKSKMVKAGSSSSSEEE 227
Query: 228 DSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANG 276
+S + D+G E EEE I+++ G G+E +A
Sbjct: 228 ESEDEAVHCDEGSEAEEEAFS--------ATPILQERDGKGAGQEQGMPAGKKRPPEARA 279
Query: 277 EIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT 336
E P N Q+E + +R P+ TE + E + V+ + IV +
Sbjct: 280 ETEKPAN--------QKEPTTCHTVKLRGAPFNVTEKNVTEFLAPLKPVA-IRIVRNAHG 330
Query: 337 KRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
++ G +V ++ E +A++ + GR + V
Sbjct: 331 NKT-GYIFVDFSNEEEVKQALKC-NREYMGGRYIEVF 365
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEAAAAFKGL 550
LV+N+P+ + E+ ++F FG L V LP T V FL +A AF L
Sbjct: 835 LVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNAL 894
Query: 551 AYKRY-KGVPLYLEWAPSDVLSQS 573
+ + G L LEWA S+V Q+
Sbjct: 895 CHSTHLYGRRLVLEWADSEVTLQA 918
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
>gi|355786561|gb|EHH66744.1| hypothetical protein EGM_03792 [Macaca fascicularis]
Length = 960
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/466 (37%), Positives = 270/466 (57%), Gaps = 45/466 (9%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
++ ESGRLFVRNLPYT+TE++L + FSK+G +SE+H +D TK+ KG A+V + PE A
Sbjct: 397 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 456
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
+A +D +FQGR+LHV+P+ KK + + ++++ G+ + K+++E + KA+ S +
Sbjct: 457 VKAYSEVDGQVFQGRMLHVLPSTIKKEASE----DASALGSSSYKKKKEAQDKATSTSSH 512
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALTNA 472
WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++ L +
Sbjct: 513 N--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLIDN 570
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL 532
GV++ S + +A +RS V LVKNLP + EL + FG+FGSL +V+LP
Sbjct: 571 GVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT 624
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V S ++ K + D + +
Sbjct: 625 AIVEFLEPLEARRAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQK-KKLQDTPLEPAEKD 683
Query: 593 RALLEQQLEGVTDADIDPDR-----------------------VESRSLFVKNLNFKTCD 629
A E +G + D +P + +LF+KNLNF T +
Sbjct: 684 EAEPETVPDGESPEDENPTEEGVDNSSANMEEEEEEEEEEEESLPGCTLFIKNLNFDTTE 743
Query: 630 ENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILD 688
E L+ F K G + S + KK K G +SMGFGF+E+ E A + LQG I+D
Sbjct: 744 EKLKGVFS---KVGTVKSCSISKKKNKTGALLSMGFGFVEYRKPEQAQKALKQLQGHIVD 800
Query: 689 GHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEAQRK 730
GH L +++ V K+ + ++++K+LVRN+ F+A +
Sbjct: 801 GHKLEVRISERATKPAVTSARKKQVPRTQTTSKILVRNIPFQAHSR 846
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 190/397 (47%), Gaps = 57/397 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A+K+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKALKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P + + +KK
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDKKKKKVA 121
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
+EK+ E D + EFL V Q R ++ WAND L + K+K + +
Sbjct: 122 GQLEKLKE--DTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDY---------- 169
Query: 176 ITLHVKSDKSNVITDSQATEKSKNAAADEL-------MSDMDYFKSR-VKKDWSDSESED 227
L+ SD + A E + A EL +SDMDY KS+ VK S S E+
Sbjct: 170 --LNFDSDSGQESEEEGAGEDLEEEAGLELKAAVQKELSDMDYLKSKMVKAGSSSSSEEE 227
Query: 228 DSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANG 276
+S + D+G E EEE I+++ G G+E +A
Sbjct: 228 ESEDEAVHCDEGSEAEEEAFS--------ATPILQERDGKGAGQEQGMPAGKKRPPEARA 279
Query: 277 EIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT 336
E P N Q+E + +R P+ TE + E + V+ + IV +
Sbjct: 280 ETEKPAN--------QKEPTTCHTVKLRGAPFNVTEKNVTEFLAPLKPVA-IRIVRNAHG 330
Query: 337 KRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
++ G +V ++ E +A++ + GR + V
Sbjct: 331 NKT-GYIFVDFSNEEEVKQALKC-NREYMGGRYIEVF 365
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEAAAAFKGL 550
LV+N+P+ + E+ ++F FG L V LP T V FL +A AF L
Sbjct: 835 LVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNAL 894
Query: 551 AYKRY-KGVPLYLEWAPSDVLSQS 573
+ + G L LEWA S+V Q+
Sbjct: 895 CHSTHLYGRRLVLEWADSEVTLQA 918
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
>gi|355564713|gb|EHH21213.1| hypothetical protein EGK_04225 [Macaca mulatta]
Length = 960
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/466 (37%), Positives = 270/466 (57%), Gaps = 45/466 (9%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
++ ESGRLFVRNLPYT+TE++L + FSK+G +SE+H +D TK+ KG A+V + PE A
Sbjct: 397 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 456
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
+A +D +FQGR+LHV+P+ KK + + ++++ G+ + K+++E + KA+ S +
Sbjct: 457 VKAYSEVDGQVFQGRMLHVLPSTIKKEASE----DASALGSSSYKKKKEAQDKATSTSSH 512
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALTNA 472
WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++ L +
Sbjct: 513 N--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLIDN 570
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL 532
GV++ S + +A +RS V LVKNLP + EL + FG+FGSL +V+LP
Sbjct: 571 GVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT 624
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V S ++ K + D + +
Sbjct: 625 AIVEFLEPLEARRAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQK-KKLQDTPLEPAEKD 683
Query: 593 RALLEQQLEGVTDADIDPDR-----------------------VESRSLFVKNLNFKTCD 629
A E +G + D +P + +LF+KNLNF T +
Sbjct: 684 EAEPEAVPDGESPEDENPTEEGVDNSSANMEEEEEEEEEEEESLPGCTLFIKNLNFDTTE 743
Query: 630 ENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILD 688
E L+ F K G + S + KK K G +SMGFGF+E+ E A + LQG I+D
Sbjct: 744 EKLKGVFS---KVGTVKSCSISKKKNKTGALLSMGFGFVEYRKPEQAQKALKQLQGHIVD 800
Query: 689 GHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEAQRK 730
GH L +++ V K+ + ++++K+LVRN+ F+A +
Sbjct: 801 GHKLEVRISERATKPAVTSARKKQVPRTQTTSKILVRNIPFQAHSR 846
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 189/397 (47%), Gaps = 57/397 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A+K+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKALKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P + +KK
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVA 121
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
+EK+ E D + EFL V Q R ++ WAND L + K+K + +
Sbjct: 122 GQLEKLKE--DTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDY---------- 169
Query: 176 ITLHVKSDKSNVITDSQATEKSKNAAADEL-------MSDMDYFKSR-VKKDWSDSESED 227
L+ SD + A E + A EL +SDMDY KS+ VK S S E+
Sbjct: 170 --LNFDSDSGQESEEEGAGEDLEEEAGLELKAAVQKELSDMDYLKSKMVKAGSSSSSEEE 227
Query: 228 DSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANG 276
+S + D+G E EEE I+++ G G+E +A
Sbjct: 228 ESEDEAVHCDEGSEAEEEAFS--------ATPILQERDGKGAGQEQGMPAGKKRPPEARA 279
Query: 277 EIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT 336
E P N Q+E + +R P+ TE + E + V+ + IV +
Sbjct: 280 ETEKPAN--------QKEPTTCHTVKLRGAPFNVTEKNVTEFLAPLKPVA-IRIVRNAHG 330
Query: 337 KRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
++ G +V ++ E +A++ + GR + V
Sbjct: 331 NKT-GYIFVDFSNEEEVKQALKC-NREYMGGRYIEVF 365
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEAAAAFKGL 550
LV+N+P+ + E+ ++F FG L V LP T V FL +A AF L
Sbjct: 835 LVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNAL 894
Query: 551 AYKRY-KGVPLYLEWAPSDVLSQS 573
+ + G L LEWA S+V Q+
Sbjct: 895 CHSTHLYGRRLVLEWADSEVTLQA 918
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
>gi|426374260|ref|XP_004053996.1| PREDICTED: probable RNA-binding protein 19 [Gorilla gorilla
gorilla]
Length = 960
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 177/488 (36%), Positives = 277/488 (56%), Gaps = 55/488 (11%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P ++++ Q +L ESGRLFVRNLPYT++E++L + FSK+G +SE+H
Sbjct: 375 GAPKNTTRSWQGRILGENEEEEDLAESGRLFVRNLPYTSSEEDLEKLFSKYGPLSELHYP 434
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A++ + PE A +A +D +FQGR+LHV+P+ KK + + ++++
Sbjct: 435 IDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKKEASE----DASA 490
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ AS + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 491 LGSSSYKKKKEAQDKANSASSHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSV 548
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 549 AVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLVAE 602
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L + FG FGSL +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 603 LQETFGHFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVGVF 662
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR------------------ 612
S ++ K + D + A E +G T D +P
Sbjct: 663 SSAAPQK-KKLQDTPSEPMEKDPAEPETVPDGETPEDKNPTEEGADNSSAKMEEEEEEEE 721
Query: 613 -----VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGF 666
+ +LF+KNLNF T +E L++ F K G + S + KK K G +SMGFGF
Sbjct: 722 EEEESLPGCTLFIKNLNFDTTEEKLKEVFS---KVGTVKSCSISKKKNKAGALLSMGFGF 778
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRN 722
+E+ E A + LQG ++DGH L +++ + K+ + ++++K+LVRN
Sbjct: 779 VEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAMTSARKKQVPRKQTTSKILVRN 838
Query: 723 VAFEAQRK 730
+ F+A +
Sbjct: 839 IPFQAHSR 846
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 196/391 (50%), Gaps = 45/391 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A K+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P + +KK
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVA 121
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKGGEK 174
+EK+ E D + EFL V Q R ++ WAND L + K+K S+ ++ G++
Sbjct: 122 GQLEKLKE--DTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQE 179
Query: 175 SITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSR-VKKDWSDSESEDDSAGDD 233
S + + + + +A+ + K A EL SDMDY KS+ VK S S E++S +
Sbjct: 180 S-----EEEGAGEDLEEEASLEPKAAVQKEL-SDMDYLKSKMVKAGSSSSSEEEESEDEA 233
Query: 234 DDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANGEIVDPG 282
D+G E EEE++ ++++ G G+E +A E P
Sbjct: 234 VHCDEGSEAEEEDSS--------ATPVLQERDSKGAGQEQGMPAGKKRPPEAGAETEKPA 285
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
N Q+E + +R P+ TE + E + V+ + IV + ++ G
Sbjct: 286 N--------QKEPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVA-IRIVRNAHGNKT-GY 335
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
+V ++ E +A++ + GR + V
Sbjct: 336 IFVDFSNEEEVKQALKC-NREYMGGRYIEVF 365
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP T V FL +A
Sbjct: 828 KQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDA 887
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 888 KRAFNALCHSTHLYGRRLVLEWADSEVTLQA 918
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRS 339
P S+ K V ++ S ++ VRN+P+ A E+RE FS FG + V + T
Sbjct: 815 PAMTSARKKQVPRKQTTS-KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTH 873
Query: 340 KGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
+G +V + + A RA L +S GR L
Sbjct: 874 RGFGFVDFLTKQDAKRAFNALCHSTHLYGRRL 905
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK----SRQFAFIGFRTEQEAEEAI 58
+ +KNL TE++L++ FS+ G + + + K+ S F F+ +R ++A++A+
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKAL 791
Query: 59 KYFNKSYLDTCRISCEIARKVGDPNM 84
K +D ++ I+ + P M
Sbjct: 792 KQLQGHVVDGHKLEVRISERATKPAM 817
>gi|320168309|gb|EFW45208.1| RNA binding domain-containing protein [Capsaspora owczarzaki ATCC
30864]
Length = 1179
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 190/496 (38%), Positives = 267/496 (53%), Gaps = 59/496 (11%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
P S+ + + ESGRLFVRNLPYT TED+L FSKFG ++EVH+ +DK+TK+ G A
Sbjct: 592 PVVSAAEGSVSIAESGRLFVRNLPYTCTEDDLIALFSKFGQLAEVHMPIDKETKKPTGFA 651
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS--QGTKTLKQR- 400
+VL+ +PE A A LD S FQGRLLH++PA+ S D+ +++ +G R
Sbjct: 652 FVLFLMPEHAVTAFRALDGSTFQGRLLHLLPAKANASEDEDADMSASKPREGEDASDYRK 711
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
R+++R S S + WN+LF+ +TV + I+ K+G+SKSDLLD EA L VR+AL ETQ
Sbjct: 712 RKQQRLKSTISADFN-WNTLFIGNNTVADAISSKYGISKSDLLDPEAASLPVRMALAETQ 770
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGL--------------------KRSNHVFLVK 500
+++ETK L G+++ GK +G+ +RS V LVK
Sbjct: 771 ILSETKTFLEEQGIHLD-------GKVNGVDAAGEGNRGVLTSAQKKLEQERSRTVILVK 823
Query: 501 NLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPL 560
N+P+ ++E EL +F K G L + LPST+ LA+V F +P EA +AF+ LAY ++K VP+
Sbjct: 824 NIPFSATEDELRPLFAKHGELKRFALPSTRALAVVEFAQPSEARSAFRNLAYSKFKQVPI 883
Query: 561 YLEWAP-SDVLSQSSTSKGNQKNDAVVGEH-----------------DAKRALLEQQLEG 602
YLEWAP S VLS + + D+ A A
Sbjct: 884 YLEWAPVSTVLSAPTKAAAQTTTDSTAPMQVEAAPSAKAALKAAAKAKADAAAAAAAARV 943
Query: 603 VTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSM 662
V+ P E R+LFVKNLNF T D +L+ F + + + + G+++SM
Sbjct: 944 VSHTSSGPG--EQRTLFVKNLNFDTSDASLKDFFAQVAPVVTATVARKRDMARPGEHLSM 1001
Query: 663 GFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS-------- 714
G+GF+E S E A + LQG L+ HAL L+L V + S
Sbjct: 1002 GYGFVELQSREQALECLKRLQGKELEDHALELKLSERVSAAPVTRSKRSAASAAEAEVPE 1061
Query: 715 STKLLVRNVAFEAQRK 730
STKL+VRNV FEA RK
Sbjct: 1062 STKLIVRNVPFEATRK 1077
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
V ES +L VRN+P+ AT EL + FS FG + V + K + +G A++ + E A
Sbjct: 1059 VPESTKLIVRNVPFEATRKELFDVFSPFGQLKSVRL-PQKPGGQHRGFAFIEFLTKEEAK 1117
Query: 355 RAIEVLDNSIFQGRLL 370
+A E L + F GR L
Sbjct: 1118 KAFESLKATHFYGRHL 1133
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPST-----KTLALVVFLEPVEAAAAFKGLA 551
+V+N+P++++ EL +F FG L V LP + A + FL EA AF+ L
Sbjct: 1065 LIVRNVPFEATRKELFDVFSPFGQLKSVRLPQKPGGQHRGFAFIEFLTKEEAKKAFESLK 1124
Query: 552 YKRYKGVPLYLEWAPSDV 569
+ G L LEWA D
Sbjct: 1125 ATHFYGRHLVLEWAAEDA 1142
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+P T L D FS G++ +L + G+ R FAFI F T++EA++A +
Sbjct: 1063 TKLIVRNVPFEATRKELFDVFSPFGQLKSVRLPQKPGGQHRGFAFIEFLTKEEAKKAFES 1122
Query: 61 FNKSYLDTCRISCEIA 76
++ + E A
Sbjct: 1123 LKATHFYGRHLVLEWA 1138
>gi|209882532|ref|XP_002142702.1| multiple RNA-binding domain-containing protein 1 [Cryptosporidium
muris RN66]
gi|209558308|gb|EEA08353.1| multiple RNA-binding domain-containing protein 1, putative
[Cryptosporidium muris RN66]
Length = 809
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 226/766 (29%), Positives = 385/766 (50%), Gaps = 108/766 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQ-KGEITDAKLMR--TKDGK----SRQFAFIGFRTEQE 53
+R+ +KNLP Y+TE RLR+ FS ITD ++ + +KD K SR+F F+GF ++
Sbjct: 28 TRLIIKNLPGYLTEKRLREHFSSINCTITDVRIAKKYSKDPKKINLSRRFGFVGFLNTED 87
Query: 54 AEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRG 113
A++A++YFN ++++T RI+ E A G ++P P SRYS +K + +++ N +
Sbjct: 88 AKKALEYFNGTFINTSRITVEFALPPGSSDIPIPKSRYSQRKLLNMEDNKNNTKEIGNKN 147
Query: 114 EKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
E DD EF Q+++ + ++ W + + N Q KG +
Sbjct: 148 ESMNFIINKSLDDR---EFTQLLRVKNNNRSWLD----------SVDIPNNNIQNKKGTD 194
Query: 174 KSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDD 233
IT I D + T+ N + +F D + E D S G++
Sbjct: 195 NYIT---------EIIDVKPTKCGVNTVRKHTI----FFDESTDDDSTGIEELDRSEGNN 241
Query: 234 DDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQ 293
DD + + ++++N D +++ + ++ + + +D N + +
Sbjct: 242 IDDKEWIKLHTIDDNNNKDEDKKLN-------------DELDLDNIDEQNKMNIENKIDN 288
Query: 294 -EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+ L SGRL V N PY+ +E++L E+FS +G V HIV + T SKG +V +A PE
Sbjct: 289 GDSLSSGRLMVLNFPYSTSEEDLIEYFSTWGEVKSTHIVKSERTGISKGCGFVQFAFPEH 348
Query: 353 ASRAIEVLDNSIFQGRLLHVMPA-RHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A RA+ S+FQGR++ V PA ++ Q+ N + G + +R+ +K +A
Sbjct: 349 AVRALSESHMSLFQGRIIRVSPALEYQPKYLNQDKINHKNIGVLSSYKRKAILKKKEQAE 408
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTN 471
+ WN L++ ++ ++ I + K DL++ E++DLAVR+AL ET VI+ TK+ L
Sbjct: 409 -DEHTWNLLYVSANSAIDAITDNMNIEKHDLVNVESSDLAVRVALAETSVISATKEWLRK 467
Query: 472 AGVNVSSLEEFSAGKTD-------------GLKRSNHVFLVKNLPYD-SSEGELAKMFGK 517
G+ V + F A TD + RS+ ++K+LP + ++ +L K+
Sbjct: 468 EGIAVKT---FEAKGTDLYNSKLVFDNKDRNIIRSSDTIILKHLPSEYTTIDDLQKICSP 524
Query: 518 FGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
+GS++++ L ++T+A+V +LE A AFK LA++R+K PLYLEWAP ++ + ++
Sbjct: 525 YGSINRLCLSPSRTIAIVQYLEDSSATIAFKKLAFRRFKNAPLYLEWAPINIFLTNHDTE 584
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
K + E LE T +F+K LNFKT ++ L K FG
Sbjct: 585 DFNKPEVPTTE-----------LEDTT------------CIFIKGLNFKTSEDCLLKIFG 621
Query: 638 --EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
++ I+ V K N +SMG+GF+EFD++E A + +QGT++D H I+Q
Sbjct: 622 NINGFRKSTIIKKTVNKD-DNQIKLSMGYGFLEFDTIENARECIKKMQGTVIDDH--IIQ 678
Query: 696 LCHAKKDEQ------------VVKKAEKDKSSTKLLVRNVAFEAQR 729
L +K+D + ++KK K S KLL++N+ F+A +
Sbjct: 679 LSMSKRDSKPKLNGIVNLDPNIIKKTS--KISNKLLIKNLPFQASK 722
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
L+KNLP+ +S+ ++ +FG GS+ V +P + + V FL +EA AA + L
Sbjct: 711 LLIKNLPFQASKNDVKNLFGAIGSVVSVRIPKKYDGTNRGYCFVEFLGKLEALAALEQLQ 770
Query: 552 YKRYKGVPLYLEWA 565
+ G L +E A
Sbjct: 771 HSHLYGRHLIIELA 784
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 275 NGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFG-NVSEVHIV-- 331
N +I N + KD+ + S RL ++NLP TE LREHFS +++V I
Sbjct: 4 NRDINKISNDINCLKDLNKYEKSSTRLIIKNLPGYLTEKRLREHFSSINCTITDVRIAKK 63
Query: 332 VDKDTKR---SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSD 382
KD K+ S+ +V + E A +A+E + + + V A SSD
Sbjct: 64 YSKDPKKINLSRRFGFVGFLNTEDAKKALEYFNGTFINTSRITVEFALPPGSSD 117
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 42/77 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ +KNLP +++ +++ F G + ++ + DG +R + F+ F + EA A++
Sbjct: 709 NKLLIKNLPFQASKNDVKNLFGAIGSVVSVRIPKKYDGTNRGYCFVEFLGKLEALAALEQ 768
Query: 61 FNKSYLDTCRISCEIAR 77
S+L + E+A+
Sbjct: 769 LQHSHLYGRHLIIELAK 785
>gi|345561254|gb|EGX44350.1| hypothetical protein AOL_s00193g78 [Arthrobotrys oligospora ATCC
24927]
Length = 870
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 239/766 (31%), Positives = 385/766 (50%), Gaps = 74/766 (9%)
Query: 1 SRICVKNLPKY-VTEDRLRDFFS--QKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEA 57
SRI ++NLP T L+ F ITD + + R+ AFIG++T ++A A
Sbjct: 17 SRIFIRNLPPTNFTTALLKSHFQTLSSTTITDCRYL-----PERRIAFIGYKTPEQANAA 71
Query: 58 IKYFNKSYLDTCRISCEIARKVGDPNMPRPWS-----------RYSLKKEKEVSED---E 103
+KYF++SY+ T R+S E+A+ D ++ RPWS ++SL + + + +
Sbjct: 72 VKYFDRSYIKTSRLSVELAKSTKDDSLSRPWSANTPGSSAYAKKHSLDEPTAKARNLKRK 131
Query: 104 KNPVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLI-----GLMADQK 158
++ ++ AK+ E + END P+ E++Q+M+ R +K+W N+T I ++A
Sbjct: 132 RDEIVEAKKPEDTKGNSLDEND-PKYKEYMQLMKGRANTKIWENETAIINEEQPIIAQPP 190
Query: 159 AKVSENISQAIKG---------GEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDM 209
SE + + G + S L + + K ++ ++ ++ E++ D+
Sbjct: 191 EDESEEEYEDLSGLRFEKKKSKKDTSDALPIPAPKESIPESTEPAVEADLEVDPEILPDV 250
Query: 210 DYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGV 269
DW A + + E EE G S +E I D+
Sbjct: 251 AAQTGLSDADWL-------KAMTSNKLETVEPPTNEEAIKKG-SLDEWGGIDNDAEM--- 299
Query: 270 GEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVH 329
E+ E V+ P S +++ E+GRLF RNL Y+ TE EL E FS FG + EVH
Sbjct: 300 -EDAPELEGVETEAPKSEFDLAVEKIEETGRLFARNLSYSITESELEELFSPFGELEEVH 358
Query: 330 IVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNS 389
+ +D + KG AYV +A P SA A + LD SIFQGR LH++P K+++ +S
Sbjct: 359 LPMDSKSHTPKGFAYVQFASPSSAISAFKALDTSIFQGRSLHILPGTAKRTTQ----LDS 414
Query: 390 TSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND 449
+ LK++RE +K + AS + WNSL+M + V+ ++A + GVSK+D+LD ++D
Sbjct: 415 FTLSKLPLKKQREILKKRN-ASKSDFEWNSLYMNINAVMSSMADRLGVSKADILDPTSSD 473
Query: 450 LAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEG 509
AV+ A ET+VI ETK+ G+N+++ + KR + V L+KN Y ++
Sbjct: 474 AAVKQAHAETRVIQETKQYFEKHGINLAAFAK--------KKRGDKVILIKNFGYGTTVD 525
Query: 510 ELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDV 569
EL + +FG +V++P T T+A+V F + AAF L ++ K L +E AP D+
Sbjct: 526 ELRALCNEFGETKRVLMPPTGTIAIVEFSDEPSGRAAFTRLYGRKLKDSMLKVEKAPEDL 585
Query: 570 LSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCD 629
+ + G + AK ++ + + DA+ P E+ SLFVKNL+F T
Sbjct: 586 FTTPVDPTKQTEVTPTTG-NIAKPSI--KDIISTDDAEAIPG--ETFSLFVKNLSFATPQ 640
Query: 630 ENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTIL 687
E L+ F EG + + +K+K KN GK +SMG+GF+EF S A G L
Sbjct: 641 EKLKDLFSPL--EGFLAARIKMKPDPKNVGKYLSMGYGFVEFKSKVFADAAAATTNGYFL 698
Query: 688 DGHALILQLCHAKKDEQVVKK---AEKDKSSTKLLVRNVAFEAQRK 730
DGH L ++ H D +K K+ +STK++++N+AFE K
Sbjct: 699 DGHKLEVRGSHKGDDAAAERKKADLRKNAASTKIIIKNLAFEVSEK 744
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S + +KNL F+ ++ +R FG++ G++ SV+V K S GFGF +F SV
Sbjct: 729 STKIIIKNLAFEVSEKQIRSLFGQY---GKLRSVRVPKKFNR---TSRGFGFAQFVSVRE 782
Query: 675 ATNVCRDLQGTILDGHALILQ 695
A N L+ T L G L+L+
Sbjct: 783 AENAMEALRHTHLHGRPLVLE 803
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
++KNL ++ SE ++ +FG++G L V +P +++ F+ EA A + L +
Sbjct: 733 IIKNLAFEVSEKQIRSLFGQYGKLRSVRVPKKFNRTSRGFGFAQFVSVREAENAMEALRH 792
Query: 553 KRYKGVPLYLEW 564
G PL LEW
Sbjct: 793 THLHGRPLVLEW 804
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNL V+E ++R F Q G++ ++ + + SR F F F + +EAE A++
Sbjct: 730 TKIIIKNLAFEVSEKQIRSLFGQYGKLRSVRVPKKFNRTSRGFGFAQFVSVREAENAMEA 789
Query: 61 FNKSYL 66
++L
Sbjct: 790 LRHTHL 795
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 298 SGRLFVRNLPYT-ATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
S R+F+RNLP T T L+ HF + + + D + IA++ Y PE A+ A
Sbjct: 16 SSRIFIRNLPPTNFTTALLKSHFQTLSSTT----ITDCRYLPERRIAFIGYKTPEQANAA 71
Query: 357 IEVLDNSIFQGRLLHVMPARHKK 379
++ D S + L V A+ K
Sbjct: 72 VKYFDRSYIKTSRLSVELAKSTK 94
>gi|60098573|emb|CAH65117.1| hypothetical protein RCJMB04_3n1 [Gallus gallus]
Length = 621
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 177/450 (39%), Positives = 276/450 (61%), Gaps = 38/450 (8%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
ESGRLFVRNLP+T+TE++L + FSK+G +SE+H +D+ TK+ KG A++ Y IPE A +A
Sbjct: 76 ESGRLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFITYMIPEHAVKA 135
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA 416
+D +FQGR++H++P+ K K ++ + ++ + + K+++E + KA+ AS +
Sbjct: 136 YAEMDGQVFQGRMMHLLPSTIK----KLKIEDIDAEESSSYKKQKEAKDKANSASSHN-- 189
Query: 417 WNSLFMRPDTVVENIARKHGVSKSDLLDREAND-LAVRIALGETQVIAETKKALTNAGVN 475
WN+LF+ + V + IA+K+ SKS +LD E+ D +AVR+ALGET+++ E ++ L GV+
Sbjct: 190 WNTLFVGTNAVADAIAQKYNASKSQVLDHESKDSVAVRVALGETELVQEIRRFLIENGVS 249
Query: 476 VSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALV 535
+ S + +AG +RS V LVKNLP +S EL +FGK GSL +V+LP+ A+V
Sbjct: 250 LDSFSQ-AAG-----ERSKTVILVKNLPATTSTAELEAVFGKHGSLGRVLLPTGGITAIV 303
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGN------QKNDAVVGEH 589
FLEP+EA AF LAY ++ VPLYLEWAP V S + K N + + +V +
Sbjct: 304 EFLEPIEAKQAFTKLAYSKFHSVPLYLEWAPMGVFSSPALQKKNVEALEKEGEERLVPDG 363
Query: 590 DAKRALLEQ---QLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRIL 646
D E+ Q E + + + + + +LF+KNLNF T + L++ F K G +
Sbjct: 364 DTTVKGSEETSAQDEEEDEEEDEEESIPGCTLFIKNLNFTTTEGTLKETFS---KVGAVK 420
Query: 647 SVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL--------C 697
S + KK K G +SMGFGF+E+ E+A R LQG I+DGH L +++
Sbjct: 421 SCTISKKKDKAGTLLSMGFGFVEYKKPESAQKALRRLQGCIVDGHKLEVKISERAVRPAV 480
Query: 698 HAKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
+ + +Q+VKK + ++K+LVRN+ F+A
Sbjct: 481 KSSRKKQMVKK----QKTSKILVRNIPFQA 506
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPVEAAAAFKGL 550
LV+N+P+ ++ E+ ++F FG L V LP S + V FL +A AF L
Sbjct: 498 LVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAFNAL 557
Query: 551 AYKRY-KGVPLYLEWA 565
+ + G L LEWA
Sbjct: 558 CHSTHLYGRRLVLEWA 573
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTK 337
V P SS K + ++ ++ ++ VRN+P+ AT E+RE FS FG + V + T
Sbjct: 476 VRPAVKSSRKKQMVKK-QKTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTG 534
Query: 338 RSKGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
+G +V + + A +A L +S GR L
Sbjct: 535 SHRGFGFVDFLTKQDAKKAFNALCHSTHLYGRRL 568
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P T +R+ FS GE+ +L + G R F F+ F T+Q+A++A
Sbjct: 495 SKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAF 554
>gi|393912130|gb|EJD76605.1| RNA recognition domain-containing protein [Loa loa]
Length = 874
Score = 301 bits (771), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 241/822 (29%), Positives = 381/822 (46%), Gaps = 150/822 (18%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LP TE++LRD F G ITD L T DGK R+FAF+GF T+ A++A +
Sbjct: 2 SRLIVKGLPSNCTEEKLRDHFGSFGTITDCSLKYTIDGKFRRFAFVGFETDGNAQKAREN 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRY-----SLKKEKEVSEDEKNPVLAAKRGEK 115
+ +++ R++ E + GD PR WS+Y + K+ E+EK + + +
Sbjct: 62 LHNTFMGASRLTVEECKPFGDDTKPRAWSKYAKGSSAYKRLHPEEEEEKTKEIVSVKDSS 121
Query: 116 KTIEKVTENDDPQLLEFLQVMQ--PRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
+ +K+ +D + +F+QV + P S + LM + + +S N S ++
Sbjct: 122 PSPKKMRNENDEEFHDFIQVQKGAPPTASSSNDESSNNSLMEELLSGISGNTSLSL---- 177
Query: 174 KSITLHVKSDKSNVITDSQATEKSKNA----AADELMSDMDYFK-SRVKKD-------WS 221
I+ ++ K+ I D + K K + E ++ + +F+ S V+K +
Sbjct: 178 -IISGFPRTVKAKGIKDWFSPIKLKGIKISRGSTEAIAFVTFFQQSDVRKALRRNGQFFG 236
Query: 222 DSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDP 281
S+ E + DDG E D IH E + +
Sbjct: 237 GSKLEVTKVSSNRVSDDGME---------------------DYIHK-TREAEVEASVA-- 272
Query: 282 GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
++LE+GRLFVRNLPY ++++LR F K+G +S++ +++ K T + KG
Sbjct: 273 ------------KILETGRLFVRNLPYVCSDEDLRYLFKKYGEISDLQVIISKKTGQCKG 320
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHN-STSQGTKTLKQR 400
A V Y PESA A LD SI +GR+LH++P K+ ++ + S Q K K +
Sbjct: 321 FAIVTYVFPESAVAAFSALDGSILKGRMLHILPGEEKREVEETGITGKSAFQKAKFAKLK 380
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN-DLAVRIALGET 459
++ +G + +WN+LF+ + V E +A K V KSDLL + VR+AL ET
Sbjct: 381 KD--------AGKSHSWNTLFLGANAVAETLAEKLDVEKSDLLLGQGEIGPGVRLALAET 432
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
+++ ET++ L GV L+ FS KRSN V ++KNL EL +MF + G
Sbjct: 433 RLVNETREYLLANGV---CLDVFS---RPAAKRSNTVIIIKNLTTKVDIDELKRMFARHG 486
Query: 520 SLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL--------- 570
+ ++++P A++ ++A AF LAY R++ PL+LEWAP D+
Sbjct: 487 PVKQLLMPPGGITAILEMENSIDAQKAFSTLAYTRFRSQPLFLEWAPYDLFKSGKLESKD 546
Query: 571 -----SQSSTSKGNQKNDAVVGEHDAK--------------------------------- 592
Q S ++ND D K
Sbjct: 547 EDKSQKQHSLEVQTERNDNEFSAEDKKKLRRSKKHQLIKEPTEVAESQKKAESVKTINET 606
Query: 593 ---------RALLEQQLEGVTDADIDPDRVE-------SRSLFVKNLNFKTCDENLRKHF 636
RA +E+ + + + D + D E +LFVKNL+FKT DE L+ F
Sbjct: 607 IARDGDMQQRAEVEKYMAEIRNEDSNDDAEEEDDRLLPGTTLFVKNLSFKTTDEGLKNKF 666
Query: 637 GEHIKEGRILSVKVKKH---LKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALI 693
RI S V K + K +SMGFGFI F E A +++QG +LDGH L+
Sbjct: 667 ESRF---RIRSATVSKKRDAVDPTKALSMGFGFITFYQPEDAQQAIKEMQGVLLDGHCLM 723
Query: 694 LQLCHAK--KDEQVVKKAE---KDKSSTKLLVRNVAFEAQRK 730
L+L H + D+ +K + +TK+L+RN+ F+A RK
Sbjct: 724 LKLSHREVVPDKITARKGVVELEQGEATKILIRNIPFQATRK 765
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP--------STKTLALVVFLEPVEAAAAFKG 549
L++N+P+ ++ E+ ++F FG + +P + V FL +A AF G
Sbjct: 754 LIRNIPFQATRKEVKQLFATFGEIRSFRMPKKVGASAEGHRGFGFVDFLTRSDARRAFSG 813
Query: 550 LAYK-RYKGVPLYLEWAPSD 568
L + + G L LEWA D
Sbjct: 814 LVHSTHFYGRRLVLEWAKPD 833
>gi|402887773|ref|XP_003907256.1| PREDICTED: probable RNA-binding protein 19 [Papio anubis]
Length = 998
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/466 (37%), Positives = 268/466 (57%), Gaps = 45/466 (9%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
++ ESGRLFVRNLPYT+TE++L + FSK+G +SE+H +D TK+ KG A+V + PE
Sbjct: 435 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHG 494
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
+A +D +FQGR+LHV+P+ KK + + ++++ G+ + K+++E + KA+ S +
Sbjct: 495 VKAYSEVDGQVFQGRMLHVLPSTIKKEASE----DASALGSSSYKKKKEAQDKATSTSSH 550
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALTNA 472
WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++ L +
Sbjct: 551 N--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLIDN 608
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL 532
GV++ S + +A +RS V LVKNLP + EL + FG+FGSL +V+LP
Sbjct: 609 GVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT 662
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V S ++ K + D + +
Sbjct: 663 AIVEFLEPLEARRAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQK-KKLQDTPLEPAEKD 721
Query: 593 RALLEQQLEGVTDADIDPDR-----------------------VESRSLFVKNLNFKTCD 629
A E +G + +P + +LF+KNLNF T +
Sbjct: 722 EAEPETVPDGESPEGENPTEEGVDNSSANMEEEEEEEEEEEESLPGCTLFIKNLNFDTTE 781
Query: 630 ENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILD 688
E L+ F K G + S + KK K G +SMGFGF+E+ E A + LQG I+D
Sbjct: 782 EKLKGVFS---KVGTVKSCSISKKKNKTGALLSMGFGFVEYRKPEQAQKALKQLQGHIVD 838
Query: 689 GHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEAQRK 730
GH L +++ V K+ + ++++K+LVRN+ F+A +
Sbjct: 839 GHKLEVRISERATKPAVTSARKKQVPRTQTTSKILVRNIPFQAHSR 884
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 126/230 (54%), Gaps = 26/230 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A+K+
Sbjct: 40 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKALKH 99
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
F+KS++DT RI+ E + GDP PR WS+++ K + K+ +D P + +KK
Sbjct: 100 FHKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVA 159
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
+EK+ E D + EFL V Q R ++ WAND L + K+K + +
Sbjct: 160 GQLEKLKE--DTEFQEFLSVHQRRAQAATWANDGLDAESSKGKSKPASDY---------- 207
Query: 176 ITLHVKSDKSNVITDSQATEKSKNAAADEL-------MSDMDYFKSRVKK 218
L+ SD + A E + A EL +SDMDY KS++ K
Sbjct: 208 --LNFDSDSGQESEEEGAGEDLEEEAGLELKAAVQKELSDMDYLKSKMVK 255
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEAAAAFKGL 550
LV+N+P+ + E+ ++F FG L V LP T V FL +A AF L
Sbjct: 873 LVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNAL 932
Query: 551 AYKRY-KGVPLYLEWAPSDVLSQS 573
+ + G L LEWA S+V Q+
Sbjct: 933 CHSTHLYGRRLVLEWADSEVTLQA 956
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 870 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 929
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 930 NALCHSTHLYGRRLVLEWA 948
>gi|378731298|gb|EHY57757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 763
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 237/753 (31%), Positives = 371/753 (49%), Gaps = 135/753 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP +T+D+LR F+ K +TDA ++ R+ F+GF T + A+ A Y
Sbjct: 13 TRVYVSGLPPSLTKDQLRSHFADKYPVTDAHVI-----PDRRIGFVGFTTHENAKSAANY 67
Query: 61 FNKSYLDTCRISCEIARKV---GDPN-MPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKK 116
FNK+++ +IS +A+ V DP+ P S+ SL + KE ++D L++K+ K+
Sbjct: 68 FNKTFIRMSKISVTLAKPVEVRRDPSGQAAPVSQRSL-RHKERNQDGAE--LSSKK-RKR 123
Query: 117 TIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSI 176
I END P A+ T I L A + + N S
Sbjct: 124 DIHDTGENDQPT-----------------ASSTNIKLDAHGQHQEGVNPSD--------- 157
Query: 177 TLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKK--DWSDSESEDDSAGDDD 234
HV + ++N + + A D SD D+ + + + D + E +D D+
Sbjct: 158 --HVMTSENNTM----------DVAEDAPRSDTDWLRGKTSRLLDLVEQEGQDSHTALDN 205
Query: 235 DDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQE 294
+NE +++D+ S E+ AN D + S+ V
Sbjct: 206 AP---------------VTNETVPHVVEDAAGS---EDKANS---DAEARTGSTATVS-- 242
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ + RLF+RNLP+ A E +LR+ F+ FG VSEVHIV D KG+AYV + P A
Sbjct: 243 -IPNARLFIRNLPFDAKEGDLRKTFAPFGRVSEVHIVTDTRKLTGKGLAYVQFVEPADAE 301
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT 414
+A+ LD FQGRL+H++PA KK E S LK+++ +RK +EA+ +T
Sbjct: 302 KALLELDGRDFQGRLMHILPASEKKVQKLSEYELS----KLPLKKQKAIKRK-NEATSST 356
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGV 474
+WNSL+M PD V+ ++A + GVSKS+LLD + D AV+ A ET VI ETK L ++GV
Sbjct: 357 FSWNSLYMNPDAVLASVADRLGVSKSELLDPSSADAAVKQAHAETSVIKETKDYLKSSGV 416
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLAL 534
N+ + + S R + L+KN + ++ EL++M ++G L++++ P+T +A+
Sbjct: 417 NIDAFKNRS--------RDDRTILLKNFSFGTTSEELSQMLNQYGDLERLVFPTTGVMAV 468
Query: 535 VVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK-R 593
+ +P A+ A K LAY+ +G LYLE AP + EH A
Sbjct: 469 AQYRDPAAASLALKQLAYRNLRGSVLYLEKAPEGLW-----------------EHAAPLP 511
Query: 594 ALLEQQLEGVTDADIDPDRVESRSL------FVKNLNFKTCDENLRKHFGEHIKEGRILS 647
A L Q + V P+ ES++L FV+NLNF T L + F LS
Sbjct: 512 ADLGTQTQQV------PEDAESKTLGSTFTVFVRNLNFSTTTARLSEAFKPL---SGFLS 562
Query: 648 VKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHA----- 699
+VK + G+ +SMGFGF+EF + A + G LDGH L++QL
Sbjct: 563 ARVKTRTDAKRPGEILSMGFGFVEFRTRAQAEAAIATMNGRRLDGHELLVQLSQKVTDLA 622
Query: 700 --KKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
++ E + KK + +K TK++++N+ FEA +K
Sbjct: 623 EERRKEDIAKKLDSNK--TKIVIKNLPFEATKK 653
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ +L + D +R FAF F T +EAE A++
Sbjct: 639 TKIVIKNLPFEATKKDIRALFGAYGQLRTVRLPKKFDNSARGFAFAEFVTPKEAENAMEA 698
Query: 61 FNKSYLDTCRISCEIA 76
+ ++L R+ + A
Sbjct: 699 LSNTHLLGRRLVLDFA 714
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R F +G + V + D ++G A+ + P+ A A+E
Sbjct: 640 KIVIKNLPFEATKKDIRALFGAYGQLRTVRLPKKFDNS-ARGFAFAEFVTPKEAENAMEA 698
Query: 360 LDNSIFQGRLL 370
L N+ GR L
Sbjct: 699 LSNTHLLGRRL 709
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
++KNLP+++++ ++ +FG +G L V LP S + A F+ P EA A + L+
Sbjct: 641 IVIKNLPFEATKKDIRALFGAYGQLRTVRLPKKFDNSARGFAFAEFVTPKEAENAMEALS 700
Query: 552 YKRYKGVPLYLEWA 565
G L L++A
Sbjct: 701 NTHLLGRRLVLDFA 714
>gi|115388597|ref|XP_001211804.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
terreus NIH2624]
gi|114195888|gb|EAU37588.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
terreus NIH2624]
Length = 812
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 239/777 (30%), Positives = 378/777 (48%), Gaps = 123/777 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D+LR FS + ++TDA ++ R+ F+GF++ + A+EA+ Y
Sbjct: 4 TRVFVSGLPPTFSNDQLRKHFSTRFQVTDAHVL-----PKRRIGFVGFKSPEAAKEAVAY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNK+Y+ +IS +IA+ V P+ K+ KE DE + KR K+ E
Sbjct: 59 FNKTYIKLSKISVDIAKPVDSEPEPK-------KRRKESVPDEPS-TNTLKR--KRDGEP 108
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMA----DQKAKV-SENISQAIKGGEKS 175
V + DP++ E+L V+Q +K WAND I A +KA+ +E+ Q + ++
Sbjct: 109 VAQ--DPKVQEYLSVIQHSSNTKTWANDDDIPPPAANDTTEKAQAEAEDAPQDLTYAQR- 165
Query: 176 ITLHVKSDKSNVITDSQATEKSK------NAAAD------------------ELMSDMDY 211
K K DS A+EK + +A+ D + +SD D+
Sbjct: 166 -----KKAKLGGAEDSYASEKVEGEPMVVDASGDAPDPEAAAGEDGAAQTEEQPVSDADW 220
Query: 212 FKSRVKKDWS----DSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHS 267
+S+ + D ++E DSA E +D ++ E + +D+
Sbjct: 221 LRSKTSRLLGLLDEDEQAEFDSAP--------RAPPAEPSDTGSENAENAEPAPEDTAKP 272
Query: 268 GVGEE-DANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVS 326
E D N E + S RLFVRNLPY TE +L F FG V
Sbjct: 273 PQAPEVDTNIE----------------NIRLSARLFVRNLPYDTTEADLEPVFGPFGRVE 316
Query: 327 EVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQ 384
E+H+ D SKG AY+ Y P++A A + LD FQGRL+H++PA KK+ D Q
Sbjct: 317 EIHVAFDTRVSSSKGFAYIQYVDPDAAVEAYKALDGKNFQGRLMHILPATAKKTYKLDDQ 376
Query: 385 ELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD 444
+L K +++++ ++ EAS +T +WNSL+M D V+ ++A + GVSKSDLLD
Sbjct: 377 DL-------AKLPVKKQKQIKRKQEASSSTFSWNSLYMNSDAVMSSVAERLGVSKSDLLD 429
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPY 504
+ D AV+ A ET VI ETK T+ GVN+ + ++ +R N LVKN +
Sbjct: 430 PTSADAAVKQAHAETHVIQETKAYFTSNGVNLDAFKQ--------RERGNTAILVKNFSF 481
Query: 505 DSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEW 564
+L K+F +G L ++++P + T+A+V F P EA AF+GLAY++ L+LE
Sbjct: 482 GVKTEDLRKLFEPYGQLTRLLMPPSGTIAIVEFARPDEAQKAFRGLAYRKLGDSILFLEK 541
Query: 565 APSDVL-SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNL 623
AP ++ S ++ K + A+ + E ++ P + +LFVKNL
Sbjct: 542 APKNLFDSTTAPQKPVVEPKAISQGFSTAETFAADEAE-----ELGP----TATLFVKNL 592
Query: 624 NFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCR 680
NF T +E F +G +S K+K + G+ +SMGFGF++F + A
Sbjct: 593 NFNTTNERFVDVF--RPLDG-FVSAKLKTKPDPKRPGQTLSMGFGFVDFRTKAQAQAALA 649
Query: 681 DLQGTILDGHALILQLCHAKKD-------EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ G LD H L+++ H D E KK + TK++++N+ F+A +K
Sbjct: 650 AMNGYKLDQHELVVRASHKGMDAAEERRREDTAKKIAARR--TKIIIKNLPFQATKK 704
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V K + GFGF +F S A N
Sbjct: 692 IIIKNLPFQATKKDVRSLFGAY---GQLRSVRVPKKFDRS---ARGFGFADFVSAREAEN 745
Query: 678 VCRDLQGTILDGHALILQLCH--AKKDEQVVKKAEK 711
L+ T L G L+L+ + A EQ +++ EK
Sbjct: 746 AMDALKNTHLLGRRLVLEFANEEAIDPEQEIQQIEK 781
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 25/139 (17%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E+ R+FV LP T + D+LR+HFS V++ H++ KR I +V + PE+A
Sbjct: 1 MENTRVFVSGLPPTFSNDQLRKHFSTRFQVTDAHVL----PKRR--IGFVGFKSPEAAKE 54
Query: 356 AIEVLDNSIFQGRLLHVMPAR------HKKSSDKQELHNSTSQGTKTLKQRREEERKASE 409
A+ + + + + V A+ K K+ + + S T TLK++R+ E A +
Sbjct: 55 AVAYFNKTYIKLSKISVDIAKPVDSEPEPKKRRKESVPDEPS--TNTLKRKRDGEPVAQD 112
Query: 410 A-----------SGNTKAW 417
S NTK W
Sbjct: 113 PKVQEYLSVIQHSSNTKTW 131
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R F F F + +EAE A+
Sbjct: 690 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMDA 749
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ E A
Sbjct: 750 LKNTHLLGRRLVLEFA 765
>gi|109098882|ref|XP_001106082.1| PREDICTED: probable RNA-binding protein 19 [Macaca mulatta]
Length = 998
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 173/466 (37%), Positives = 268/466 (57%), Gaps = 45/466 (9%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
++ ESGRLFVRNLPYT+TE++L + FSK+G +SE+H +D TK+ KG A+V + PE A
Sbjct: 435 DLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHA 494
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
+A +D +FQGR+LHV+P+ KK + + ++++ G+ + K+++E + KA+ S +
Sbjct: 495 VKAYSEVDGQVFQGRMLHVLPSTIKKEASE----DASALGSSSYKKKKEAQDKATSTSSH 550
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALTNA 472
WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++ L +
Sbjct: 551 N--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLIDN 608
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL 532
GV++ S + +A +RS V LVKNLP + EL + F +FGSL +V+LP
Sbjct: 609 GVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGGIT 662
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V S ++ K + D + +
Sbjct: 663 AIVEFLEPLEARRAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQK-KKLQDTPLEPAEKD 721
Query: 593 RALLEQQLEGVTDADIDPDR-----------------------VESRSLFVKNLNFKTCD 629
A E +G + D +P + +LF+KNLNF T +
Sbjct: 722 EAEPETVPDGESPEDENPTEEGVDNSSANMEEEEEEEEEEEESLPGCTLFIKNLNFDTTE 781
Query: 630 ENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILD 688
E L+ F K G + S + KK K G +SMG GF+E+ E A + LQG I+D
Sbjct: 782 EKLKGVFS---KVGTVKSCSISKKKNKTGALLSMGVGFVEYRKPEQAQKALKQLQGHIVD 838
Query: 689 GHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEAQRK 730
GH L +++ V K+ + ++++K+LVRN+ F+A +
Sbjct: 839 GHKLEVRISERATKPAVTSARKKQVPRTQTTSKILVRNIPFQAHSR 884
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 189/397 (47%), Gaps = 57/397 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A+K+
Sbjct: 40 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKALKH 99
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P + +KK
Sbjct: 100 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVA 159
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
+EK+ E D + EFL V Q R ++ WAND L + K+K + +
Sbjct: 160 GQLEKLKE--DTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDY---------- 207
Query: 176 ITLHVKSDKSNVITDSQATEKSKNAAADEL-------MSDMDYFKSR-VKKDWSDSESED 227
L+ SD + A E + A EL +SDMDY KS+ VK S S E+
Sbjct: 208 --LNFDSDSGQESEEEGAGEDLEEEAGLELKAAVQKELSDMDYLKSKMVKAGSSSSSEEE 265
Query: 228 DSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANG 276
+S + D+G E EEE I+++ G G+E +A
Sbjct: 266 ESEDEAVHCDEGSEAEEEAFS--------ATPILQERDGKGAGQEQGMPAGKKRPPEARA 317
Query: 277 EIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT 336
E P N Q+E + +R P+ TE + E + V+ + IV +
Sbjct: 318 ETEKPAN--------QKEPTTCHTVKLRGAPFNVTEKNVTEFLAPLKPVA-IRIVRNAHG 368
Query: 337 KRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
++ G +V ++ E +A++ + GR + V
Sbjct: 369 NKT-GYIFVDFSNEEEVKQALKC-NREYMGGRYIEVF 403
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEAAAAFKGL 550
LV+N+P+ + E+ ++F FG L V LP T V FL +A AF L
Sbjct: 873 LVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNAL 932
Query: 551 AYKRY-KGVPLYLEWAPSDVLSQS 573
+ + G L LEWA S+V Q+
Sbjct: 933 CHSTHLYGRRLVLEWADSEVTLQA 956
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 870 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 929
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 930 NALCHSTHLYGRRLVLEWA 948
>gi|226533389|ref|NP_001034357.2| RNA binding motif protein 19 [Gallus gallus]
Length = 957
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 177/451 (39%), Positives = 274/451 (60%), Gaps = 40/451 (8%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
ESGRLFVRNLP+T+TE++L + FSK+G +SE+H +D+ TK+ KG A++ Y IPE A +A
Sbjct: 412 ESGRLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFITYMIPEHAVKA 471
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA 416
+D +FQGR++H++P+ K K ++ + ++ + + K+++E + KA+ AS +
Sbjct: 472 YAEMDGQVFQGRMMHLLPSTIK----KLKIEDIDAEESSSYKKQKEAKDKANSASSHN-- 525
Query: 417 WNSLFMRPDTVVENIARKHGVSKSDLLDREAND-LAVRIALGETQVIAETKKALTNAGVN 475
WN+LF+ + V + IA+K+ SKS +LD E+ D +AVR+ALGET+++ E ++ L GV+
Sbjct: 526 WNTLFVGTNAVADAIAQKYNASKSQVLDHESKDSVAVRVALGETELVQEIRRFLIENGVS 585
Query: 476 VSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALV 535
+ S + +AG +RS V LVKNLP +S EL +FGK GSL +V+LP+ A+V
Sbjct: 586 LDSFSQ-AAG-----ERSKTVILVKNLPATTSTAELEAVFGKHGSLGRVLLPTGGITAIV 639
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGN------QKNDAVVGEH 589
FLEP+EA AF LAY ++ VPLYLEWAP V S + K N + + +V +
Sbjct: 640 EFLEPIEAKQAFTKLAYSKFHSVPLYLEWAPMGVFSSPALQKKNVEALEKEGEERLVPDG 699
Query: 590 DAKRALLEQ---QLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRIL 646
D E+ Q E + + + + + +LF+KNLNF T + L++ F K G +
Sbjct: 700 DTTVKGSEETSAQDEEEDEEEDEEESIPGCTLFIKNLNFTTTEGTLKETFS---KVGAVK 756
Query: 647 SVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQV 705
S + KK K G +SMGFGF+E+ E+A R LQG I+DGH L +++ E+
Sbjct: 757 SCTISKKKDKAGTLLSMGFGFVEYKKPESAQKALRRLQGCIVDGHKLEVKI-----SERA 811
Query: 706 VKKAEKD---------KSSTKLLVRNVAFEA 727
V+ A K + ++K+LVRN+ F+A
Sbjct: 812 VRPAVKSSRKKQTVKKQKTSKILVRNIPFQA 842
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 122/229 (53%), Gaps = 10/229 (4%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + EDR R F+ G +TD L TKDGK R+F FIG+++E EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEDRFRKLFAAFGTLTDCCLKFTKDGKFRKFGFIGYKSEDEAQAALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FN+S++DT R++ E+ + GDP+ P+ WS++S K + EK +AA KK +K
Sbjct: 62 FNRSFIDTSRVTVELCKSFGDPSKPKAWSKHSQKVPALEKQPEKPMTIAAPASTKKDKKK 121
Query: 121 V--TEN-----DDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
+EN +D EFL V Q R + WAND L +K+K +
Sbjct: 122 KNPSENLKELEEDKTFQEFLVVHQKRSQVATWANDALAEEPKKEKSKPVADYLNFDSDES 181
Query: 174 KSITLHVKSDKSNVITDSQATEKSKNAAAD---ELMSDMDYFKSRVKKD 219
+ ++ K + + + + K + E +SDMDY KS+V KD
Sbjct: 182 EDLSEEEKDGRESSEDEKETKAKKQQEKKAATREDLSDMDYLKSKVVKD 230
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPVEAAAAFKGL 550
LV+N+P+ ++ E+ ++F FG L V LP S + V FL +A AF L
Sbjct: 834 LVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAFNAL 893
Query: 551 AYKRY-KGVPLYLEWA 565
+ + G L LEWA
Sbjct: 894 CHSTHLYGRRLVLEWA 909
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P T +R+ FS GE+ +L + G R F F+ F T+Q+A++A
Sbjct: 831 SKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAF 890
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASRAIE 358
++ VRN+P+ AT E+RE FS FG + V + T +G +V + + A +A
Sbjct: 832 KILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAFN 891
Query: 359 VLDNSI-FQGRLL 370
L +S GR L
Sbjct: 892 ALCHSTHLYGRRL 904
>gi|449303128|gb|EMC99136.1| hypothetical protein BAUCODRAFT_120428 [Baudoinia compniacensis
UAMH 10762]
Length = 822
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 233/776 (30%), Positives = 376/776 (48%), Gaps = 109/776 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI +K LP +E+ LR F G +TD ++ +R+ ++G+ ++A++A+KY
Sbjct: 3 SRIFIKGLPPTFSEEELRKHFP--GNVTDVRIF-----PNRRIGYVGYSKPEDAQKAVKY 55
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGE------ 114
NKS++ RIS E+AR +P S +++ P A+R E
Sbjct: 56 HNKSFIRMSRISVELARPAKEPG----------------SHEQQQPSPPAQRREGGLPTN 99
Query: 115 ---KKTIEKVTENDDPQLLEFLQVMQPRVK-SKMWANDTLIGLMADQKAKVSENISQAIK 170
+ + ++DDP+L EF+ VM+P+ K K W + + Q+A V E+ + A K
Sbjct: 100 EIHSQRKREAVDDDDPKLKEFMDVMKPKTKKQKGWEGEEV-----PQEAPV-EHTASAEK 153
Query: 171 GGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDM----------DYFKSRVKKDW 220
+ + K K++ DE+ + D + DW
Sbjct: 154 ASDDEYEVLQKDVKTDAAVAPAMPHPEPVGGDDEVWGGIVETVSHAEPVDPAPTVSDADW 213
Query: 221 SDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVD 280
+ S + DDD+++ E + + +S + + ++ V E+ AN
Sbjct: 214 TRSRTSRLLGLLDDDEEETLAGSERQPRIDDESYADVPAKGNKNVRPAV-EDPANSLPSP 272
Query: 281 PGNPSS----------SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHI 330
P + + S+ DV V S RLFVRNLPY+AT+++L F FGN++ VH+
Sbjct: 273 PADSQTLGTETTRILDSASDVDA-VRSSMRLFVRNLPYSATKEDLEAEFEPFGNLAAVHV 331
Query: 331 VVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHN 388
+ K T +KG A++ Y+ ++A RA+ D FQGRLLH++P + K+ D EL
Sbjct: 332 SMSKKTGSAKGFAFIQYSDADAAERALREKDGQTFQGRLLHILPGKAKREDKLDDFELSK 391
Query: 389 STSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN 448
+ + +K+RR EAS T WN+L+M D VV ++A + G++KS +LD ++
Sbjct: 392 LPLKKQQEIKRRR-------EASSKTFNWNALYMNADAVVSSVAERLGIAKSAVLDPTSS 444
Query: 449 DLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSE 508
D AV+ A ET VI ETK GV++ S KT KR + L KN+P+D S+
Sbjct: 445 DAAVKQAHAETHVIQETKAYFKQHGVDLDSF------KTS--KRGDTAILAKNIPFDFSK 496
Query: 509 GELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSD 568
EL + F + G + K ++P + +A+V F + AA+ LAY+R K L+LE AP D
Sbjct: 497 DELKRRFEEHGEVKKFLMPPSGAIAIVEFANAEQCRAAYGALAYRRVKSSILFLEKAPQD 556
Query: 569 VL-SQSSTS-------KGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFV 620
+ ++ +TS +G K A + AK A+ D + +LFV
Sbjct: 557 LFNAKPATSEDTNGGAEGVTKTSASDLKDSAKVAVA--------------DSATTATLFV 602
Query: 621 KNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATN 677
+NLNF T ++L + F LS +VK K G+ +SMGFGF+EF + + A
Sbjct: 603 RNLNFSTTTQHLTETFSPL---SGFLSARVKTKTDAKKPGQILSMGFGFLEFRTAQQAQA 659
Query: 678 VCRDLQGTILDGHALILQLCHAKKD---EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ + G LDGH L ++ H D E+ A K + TK++++N+ FEA +K
Sbjct: 660 ALQAMDGYTLDGHRLQIRASHKGADAAEERRHADAAKRGTKTKIIIKNLPFEATKK 715
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 13/105 (12%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ R+F++ LP T +E+ELR+HF GNV++V I ++ I YV Y+ PE A +A+
Sbjct: 2 ASRIFIKGLPPTFSEEELRKHFP--GNVTDVRIFPNRR------IGYVGYSKPEDAQKAV 53
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRRE 402
+ + S + + V AR K E + QRRE
Sbjct: 54 KYHNKSFIRMSRISVELARPAKEPGSHEQQQPSPPA-----QRRE 93
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R F FG + V + D + ++G A+ + P+ A A+E
Sbjct: 702 KIIIKNLPFEATKKDVRALFGAFGQLRSVRVPKKMD-RAARGFAFADFTTPKEAESAMEA 760
Query: 360 LDNSIFQGRLL 370
L N+ GR L
Sbjct: 761 LRNTHLLGRRL 771
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R FAF F T +EAE A++
Sbjct: 701 TKIIIKNLPFEATKKDVRALFGAFGQLRSVRVPKKMDRAARGFAFADFTTPKEAESAMEA 760
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ + A
Sbjct: 761 LRNTHLLGRRLVLDFA 776
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 488 DGLKRSNHV-FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPV 541
D KR ++KNLP+++++ ++ +FG FG L V +P + + A F P
Sbjct: 693 DAAKRGTKTKIIIKNLPFEATKKDVRALFGAFGQLRSVRVPKKMDRAARGFAFADFTTPK 752
Query: 542 EAAAAFKGLAYKRYKGVPLYLEWAPSDV 569
EA +A + L G L L++A D
Sbjct: 753 EAESAMEALRNTHLLGRRLVLDFAEGDA 780
>gi|67623683|ref|XP_668124.1| RNA-binding domain protein [Cryptosporidium hominis TU502]
gi|54659302|gb|EAL37885.1| RNA-binding domain protein [Cryptosporidium hominis]
Length = 800
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 231/780 (29%), Positives = 387/780 (49%), Gaps = 125/780 (16%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGK------SRQFAFIGFRTEQE 53
SRI +KNLP Y++E RL+D S G ITD K+++ + K SR+F F+GF +E++
Sbjct: 17 SRIIIKNLPSYLSEKRLKDHISSIGCNITDVKIVKKRSEKNPEVESSRKFGFVGFYSEED 76
Query: 54 AEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYS-----------LKKEKEVSED 102
A++ ++YFN +++DTCRI+ + A G +PRPWS+YS +K+ EV D
Sbjct: 77 AKKVLEYFNGTFIDTCRINVQYAFPPGSDLLPRPWSKYSVGSSQYNKRNNIKENTEV--D 134
Query: 103 EKNPVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWA-------NDTLIGLMA 155
EK P+ +K DD + F + + + +K W N+ +
Sbjct: 135 EKEPITLSKE------------DDLKKENFKKWISQKNSNKSWLDSADLIDNNEINSFKN 182
Query: 156 DQKAKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSR 215
D K+S I + K G S+ H++ ++S++ + + +L + F
Sbjct: 183 DSSVKISSEIVKPTKAGVSSVRKHIQ------FSESESDPDPDSDSDQDLELKHETF--- 233
Query: 216 VKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDAN 275
+ES+D+S+ + + D E + D N+E +
Sbjct: 234 -------NESDDNSSTNVSESDLSSESNTDSED-----NQELE----------------- 264
Query: 276 GEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKD 335
E VD G +S E+ RL V N+ Y+ TE++L + FSK+G V V+I+ +
Sbjct: 265 -EAVDIGEQMVTSP------TETSRLMVVNISYSTTEEDLNKFFSKWGEVKSVNIIRSPE 317
Query: 336 TKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTK 395
+ SKG +V Y E A A+ S+ GR+L V PA +K + + N ++
Sbjct: 318 SGVSKGYGFVQYEFVEHAVSALSQAHLSLLHGRVLRVSPAFNKPTKTITDSFNESNVIVH 377
Query: 396 T-LKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRI 454
+ K + +RK E+S + K WN L++ ++ V V K D++D +A DLA R+
Sbjct: 378 SDYKLKALNKRK--ESSIDKKTWNLLYISGNSAVNAFIDNEDVKKHDIVDIQAPDLASRV 435
Query: 455 ALGETQVIAETKKALTNAGVNVSSLEE-----FSAG-KTDGL---KRSNHVFLVKNLPYD 505
+L ET VI+ TK+ L G++V + E F+A K +G+ +RS ++K+LP D
Sbjct: 436 SLMETHVISATKEWLKKEGISVKAFEVEGSDIFTAKLKFEGVGNVERSKDTIIIKHLPSD 495
Query: 506 S-SEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEW 564
+ +L K+ FG ++++ L +KT+A+V FL+ A +AFK LA+KR+K VPLY+EW
Sbjct: 496 QVTLSDLQKICSPFGRINRLCLSPSKTIAIVQFLDESSAESAFKRLAFKRFKSVPLYIEW 555
Query: 565 APSDV-LSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNL 623
AP ++ +S++ T K + VV + + + D + D D + +F+KNL
Sbjct: 556 APVNLFVSETETQKEKETESKVVNKKE------------ILDMNEDLDNTNAVHVFIKNL 603
Query: 624 NFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNV---SMGFGFIEFDSVETATNVCR 680
+F T ++ L F + ++ R ++ +K H + N+ SMG+GF+EF + E A +
Sbjct: 604 SFDTTNKALENLFSK-VEGFRKATITMKTHSDSDGNIIKKSMGYGFLEFKTSENAKECVK 662
Query: 681 DLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS-----------STKLLVRNVAFEAQR 729
+Q LDGH L L++ K QV +K S KLL++N+ F+A +
Sbjct: 663 RMQSITLDGHTLELKISKKSKTSQVDEKTSLPYGKQLTDIGVKNVSNKLLIKNLPFQATK 722
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
++ +KNLP T+ + F+ G +T ++ + DG ++ + FI F + EA A++ F
Sbjct: 710 KLLIKNLPFQATKSDIMSLFNSVGTVTSIRIPKKSDGTNKGYCFIEFLGKLEAISALEQF 769
Query: 62 NKSYLDTCRISCEIA 76
++L + E+A
Sbjct: 770 QHTHLYGRHLIIEVA 784
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 489 GLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEA 543
G+K ++ L+KNLP+ +++ ++ +F G++ + +P + K + FL +EA
Sbjct: 703 GVKNVSNKLLIKNLPFQATKSDIMSLFNSVGTVTSIRIPKKSDGTNKGYCFIEFLGKLEA 762
Query: 544 AAAFKGLAYKRYKGVPLYLEWAPSD 568
+A + + G L +E A +D
Sbjct: 763 ISALEQFQHTHLYGRHLIIEVAEND 787
>gi|340517170|gb|EGR47415.1| predicted protein [Trichoderma reesei QM6a]
Length = 797
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 244/781 (31%), Positives = 369/781 (47%), Gaps = 148/781 (18%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
+RI VK LP +TE R FS K EITD KL+ R+ ++G++T Q+A A+K
Sbjct: 4 TRIFVKGLPPTITEAEFRKHFSAKNREITDVKLI-----PQRRIGYVGYKTPQDASGAVK 58
Query: 60 YFNKSYLDTCRISCEIARKVGDP---------NMPRPWSRYSLKKEKEVSEDEKNPVLAA 110
YFNKSY+ +IS E AR VG NM S +L K + + ++ PV +
Sbjct: 59 YFNKSYIRMSKISVEPARPVGTACDSSNNLYTNMG--ISDPALTKSQRSAHSDQ-PVAST 115
Query: 111 KR--------GEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDT-----LIGLMADQ 157
+R +K+ E++ E+D P+L EFL+VM+ K + A++T + GL
Sbjct: 116 QRPRQDDEGSSKKRKREELDESD-PKLREFLRVMK-TGKEGVLADETNPDADMTGLATGG 173
Query: 158 KAKVSENIS----QAIKGGEKSITLHVKSDKSNVIT--DSQATEKSKNAAADELMSDMDY 211
A V E S + I ++ + S+ S I D + E K D +D D+
Sbjct: 174 DALVPEGESDDEYEQIPKKKEKLRKLESSESSRKIVADDVKPQEAEKLPQLDAGATDDDW 233
Query: 212 FKSRVKKDW-----------SDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSI 260
+SR + + E ++A D+ +DD + + E+ +
Sbjct: 234 LRSRTNRLLDLVDPDDLPPPTQPAVETETAVQDEKEDDDAPPSPRDA-----TEEDVPPV 288
Query: 261 IKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFS 320
+ D + G S + D + + RLFVRNLPYT TE++L E F
Sbjct: 289 VDD----------------NKGADGSGADDAVATISRTSRLFVRNLPYTTTEEDLYEAFG 332
Query: 321 KFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKS 380
KFG + EVH+ + + KG A VL+ P A A + LD FQGR+LH++PA KK
Sbjct: 333 KFGTIQEVHLPTNA-SGAGKGFALVLFDNPSDAVNAFQALDGVTFQGRILHIIPAEAKKQ 391
Query: 381 SDKQELHNSTSQGTKTLKQRREEE-RKASEASGNTKAWNSLFMRPDTVVENIARKHGVSK 439
S + G L +++ RK +EA+ + WNS++M D V ++A + GVSK
Sbjct: 392 SLDEF-------GMSKLPLKKQNMIRKKAEAATSVFNWNSMYMSQDAVNASVAARLGVSK 444
Query: 440 SDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLV 499
S++LD + D AV+ A+ ET VI ETK + GV++ + + KR LV
Sbjct: 445 SEVLDPTSADAAVKQAIAETTVIQETKAYFASNGVDLDAFKSH--------KRGGTSILV 496
Query: 500 KNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVP 559
KN PY +S EL KMF + G + +V++P T T+A+V F + A AAF +AY+R K
Sbjct: 497 KNFPYGTSMEELRKMFEECGPVLRVLMPPTGTIAIVQFAQLNHAKAAFGKMAYRRVKDSV 556
Query: 560 LYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLF 619
L+LE AP E+ SLF
Sbjct: 557 LFLEKAPP---------------------------------------------AETASLF 571
Query: 620 VKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETAT 676
V+NLNF T L + F +G +S +VK + + G+ +SMGFGF+EF S + A
Sbjct: 572 VRNLNFATTTNRLAEIF--EPLDG-FVSARVKTKIDPKRPGQTLSMGFGFVEFRSKDQAQ 628
Query: 677 NVCRDLQGTILDGHALILQLCHAKKD-------EQVVKKAEKDKSSTKLLVRNVAFEAQR 729
+ + G +LDGHAL ++ H D E KKA + TK++++N+ F+A +
Sbjct: 629 AALKAMDGYVLDGHALGVKASHRGHDAAEERRREDAAKKAAAQR--TKIVIKNLPFQATK 686
Query: 730 K 730
K
Sbjct: 687 K 687
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 296 LESGRLFVRNLPYTATEDELREHFS-KFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+E+ R+FV+ LP T TE E R+HFS K +++V ++ + I YV Y P+ AS
Sbjct: 1 METTRIFVKGLPPTITEAEFRKHFSAKNREITDVKLIPQRR------IGYVGYKTPQDAS 54
Query: 355 RAIEVLDNSIFQGRLLHVMPAR 376
A++ + S + + V PAR
Sbjct: 55 GAVKYFNKSYIRMSKISVEPAR 76
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R FAF F T +EAE A+
Sbjct: 673 TKIVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADYTARGFAFADFVTPREAENALNA 732
Query: 61 FNKSYLDTCRISCEI 75
++L R+ +
Sbjct: 733 LKDTHLLGRRLVLDF 747
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R F +G + V + D ++G A+ + P A A+
Sbjct: 674 KIVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADYT-ARGFAFADFVTPREAENALNA 732
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 733 LKDTHLLGRRL 743
>gi|453086560|gb|EMF14602.1| multiple RNA-binding domain-containing protein 1 [Mycosphaerella
populorum SO2202]
Length = 828
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 237/757 (31%), Positives = 381/757 (50%), Gaps = 71/757 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LP E + R F QKG+ITDAK+ +R+ ++GF+T ++A++A+KY
Sbjct: 4 SRIFVKGLPPTFDEAQFRKHFGQKGQITDAKIF-----PNRRIGYVGFKTSEDAQKAVKY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPR--PWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTI 118
FNK+++ RI EIAR + + R P ++ + E+ ++E+ + L KR
Sbjct: 59 FNKTFIRMSRIGVEIARPIDESPASRRNPTAKVTGANEQPLAENNQ---LKRKRDTDSKP 115
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMA----DQKAKVSE------NISQA 168
+ +DP+L EFL + + K D + +A D+ A + E Q
Sbjct: 116 HEDAAKEDPKLKEFLDSYKSKSDKKALVADAMAHPIAMAENDETAVIIEAGASDDEYEQV 175
Query: 169 IKGGEK--SITLHVKSDKS-----NVITDSQA--TEKSKNAAADELMSDMDYFKSRVKK- 218
K ++ SI V D V+ A E+ A+ M+D ++ +SR +
Sbjct: 176 PKKAKRTTSIPKPVHEDSMPDAPVEVVVAEPAGNIEQQPEASGKMAMTDDEWARSRTSRL 235
Query: 219 -DWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGE 277
D E E+ S DD D E S + + SI + EE+ +
Sbjct: 236 LGLLDDEDEEISHAKQDDSDSDTEVVRPSRAETRLSTPAPEP--RSSIPTPPAEEEREDD 293
Query: 278 IVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTK 337
+ D KD++ V + RLFVRNL Y + ++L FS FGN+ ++HI +DK T
Sbjct: 294 VPD--------KDIEA-VRSTMRLFVRNLSYDVSYEDLEAEFSSFGNLEQIHIPLDKTTG 344
Query: 338 RSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTL 397
SKG AYV Y P+SA +A+ D FQGRL+H++PA K+ + E + L
Sbjct: 345 SSKGFAYVQYTDPDSAEKALVDRDGRTFQGRLIHILPATAKRENKIDEFELAKL----PL 400
Query: 398 KQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALG 457
K+++E +RK EA+ WN+L+M D V+ ++A + G++KS++LD ++D AV+ A
Sbjct: 401 KKQQEIKRK-REAANTVFNWNALYMNQDAVISSVATRLGLAKSEVLDPTSSDAAVKQAHA 459
Query: 458 ETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGK 517
ET +I ETK GV++ S ++ + G T V LVKN+P D S EL ++F +
Sbjct: 460 ETHIIQETKSYFRQQGVDLDSFKKSARGDT--------VILVKNIPADCSRDELRRLFDE 511
Query: 518 FGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
G + + ++P T+A+V + + AAF LAY+R K L+LE AP DV S +
Sbjct: 512 QGDVKRFLMPPAGTIAIVEYGNAAQCKAAFGTLAYRRVKSSVLFLEKAPKDVFSAKPVDE 571
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
+ ++ + L +L+ T AD S +LFV+NLNF T L + F
Sbjct: 572 QSAQSTP-----EGVSKLSTSELKDSTVADT----AGSATLFVRNLNFSTTTSLLTETFK 622
Query: 638 EHIKEGRI-LSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL 696
+G + VK++ K G+ +SMGFGF+EF + + A + + G L+GH L ++
Sbjct: 623 PL--DGFLNARVKMRTDPKRGQ-LSMGFGFLEFQTPKHAQAALQAMDGYSLEGHKLQIRA 679
Query: 697 CHAKKD---EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
H +D ++ K ++TK++++N+ FEA +K
Sbjct: 680 SHKGEDAAEKRKQADKAKKAATTKVIIKNLPFEATKK 716
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FGE+ G++ SV+V K + G + GF F +F +V+ A +
Sbjct: 704 VIIKNLPFEATKKDVRALFGEY---GQLRSVRVPKKMDRG---ARGFAFADFTTVKEAQS 757
Query: 678 VCRDLQGTILDGHALILQLC 697
L+ T L G L+L
Sbjct: 758 AMDALKDTHLLGRRLVLDFA 777
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNLP T+ +R F + G++ ++ + D +R FAF F T +EA+ A+
Sbjct: 704 VIIKNLPFEATKKDVRALFGEYGQLRSVRVPKKMDRGARGFAFADFTTVKEAQSAMDALK 763
Query: 63 KSYLDTCRISCEIA 76
++L R+ + A
Sbjct: 764 DTHLLGRRLVLDFA 777
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ S R+FV+ LP T E + R+HF + G +++ I ++ I YV + E A +
Sbjct: 1 MASSRIFVKGLPPTFDEAQFRKHFGQKGQITDAKIFPNRR------IGYVGFKTSEDAQK 54
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
A++ + + + + V AR
Sbjct: 55 AVKYFNKTFIRMSRIGVEIAR 75
>gi|442749963|gb|JAA67141.1| Putative rna-binding protein rrm superfamily [Ixodes ricinus]
Length = 863
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 182/455 (40%), Positives = 267/455 (58%), Gaps = 32/455 (7%)
Query: 290 DVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAI 349
D + + ++GR+FVRNL YT TED++ F KFG +SEVH+ +DK T++ KG A+V +
Sbjct: 315 DPTETLADTGRIFVRNLSYTVTEDDIEALFKKFGPISEVHLSIDKITRKPKGFAFVSFMF 374
Query: 350 PESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASE 409
PE A +A LD + QGRLLH++PA+ K S ++ +Q + K ++E E+K S
Sbjct: 375 PEHAIKAFSELDGKLLQGRLLHLIPAKAKNSEEED------AQKPMSFKDKKEAEQKKSS 428
Query: 410 ASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND-LAVRIALGETQVIAETKKA 468
SG+ WN+LF+ + + + +A ++ SK +LL E D +AVR+ALGETQV+ ETK+
Sbjct: 429 GSGHN--WNTLFLGANALADVMAERYDTSKQELLGTEMGDSVAVRMALGETQVVTETKEF 486
Query: 469 LTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS 528
L GV L+ F T+ RS V LVKNLP + E+ F KFG+L +V+LP
Sbjct: 487 LQGQGVE---LDAFCRPATE---RSKTVILVKNLPAKTHPDEIRDAFAKFGTLSRVVLPP 540
Query: 529 TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ-----SSTSKGNQKND 583
ALV F EP EA AF+ LAY ++K VPLYLEWAP V + + T +G K +
Sbjct: 541 WGVCALVEFQEPSEARTAFRRLAYSKFKHVPLYLEWAPIGVFKEKKTVPTPTLEGVTKEE 600
Query: 584 AVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEG 643
D ++ + + + + + +P ++ +LFVKNLNF T ++ LR+HF G
Sbjct: 601 PTKASEDGEKEAEKAERQEEEEEEEEPPEPDT-TLFVKNLNFSTTEDALREHFAGC---G 656
Query: 644 RILSVKV--KKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
I V + KK LKN GK +SMG+GF++F ++A + LQ + LD HA+ L+L +
Sbjct: 657 PIHEVTIAKKKDLKNPGKMLSMGYGFVQFKLKQSAKKALKQLQHSKLDEHAVELKLSKRE 716
Query: 701 KDEQVV-----KKAEKDKSSTKLLVRNVAFEAQRK 730
+Q KK + K STK+LVRN+ FEA +K
Sbjct: 717 TAQQTAAELKRKKTDLGKESTKILVRNIPFEATKK 751
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 67/92 (72%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VKNLPK V EDRLR+FFS KG ITD +L TK+G R+FAF+G++ E +A A +Y
Sbjct: 2 SRIIVKNLPKRVKEDRLREFFSSKGTITDLQLKYTKEGVFRRFAFVGYKDEAQAAVAKEY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
F+ +YLDT ++ +I + +GD PR WS+YS
Sbjct: 62 FHNAYLDTSKLQVDICKALGDAEKPRAWSKYS 93
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 132/323 (40%), Gaps = 68/323 (21%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI-AYVLYAIPESASRAIEV 359
+ V+NLP DE+R+ F+KFG +S V + G+ A V + P A A
Sbjct: 509 ILVKNLPAKTHPDEIRDAFAKFGTLSRVVLP-------PWGVCALVEFQEPSEARTAFRR 561
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW-- 417
L S F+ L++ A +K+ + T +G +EE KASE
Sbjct: 562 LAYSKFKHVPLYLEWAPIGVFKEKKTVPTPTLEGVT-----KEEPTKASEDGEKEAEKAE 616
Query: 418 ---------------NSLFMRP--DTVVENIARKH----------GVSKSDLLDREANDL 450
+LF++ + E+ R+H ++K L L
Sbjct: 617 RQEEEEEEEEPPEPDTTLFVKNLNFSTTEDALREHFAGCGPIHEVTIAKKKDLKNPGKML 676
Query: 451 AVRIALGETQVIAETKKAL---TNAGVNVSSLE--------------EFSAGKTDGLKRS 493
++ + ++ KKAL ++ ++ ++E E KTD K S
Sbjct: 677 SMGYGFVQFKLKQSAKKALKQLQHSKLDEHAVELKLSKRETAQQTAAELKRKKTDLGKES 736
Query: 494 NHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST-------KTLALVVFLEPVEAAAA 546
+ LV+N+P+++++ EL ++F FG+L + LP + A V FL +A A
Sbjct: 737 TKI-LVRNIPFEATKKELQELFSVFGTLRDIRLPKKMAGTGRHRGFAFVDFLTKNDAKRA 795
Query: 547 FKGLAYKRY-KGVPLYLEWAPSD 568
F+ L + G L LEWA SD
Sbjct: 796 FQALCQSTHLYGRRLVLEWASSD 818
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASR 355
ES ++ VRN+P+ AT+ EL+E FS FG + ++ + T R +G A+V + A R
Sbjct: 735 ESTKILVRNIPFEATKKELQELFSVFGTLRDIRLPKKMAGTGRHRGFAFVDFLTKNDAKR 794
Query: 356 AIEVLDNSI-FQGRLLHVMPARHKKSSDKQEL 386
A + L S GR L + A SSD QE+
Sbjct: 795 AFQALCQSTHLYGRRLVLEWA----SSDDQEV 822
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK------SRQFAFIGFRTEQEAEE 56
+ VKNL TED LR+ F+ G I + + + KD K S + F+ F+ +Q A++
Sbjct: 634 LFVKNLNFSTTEDALREHFAGCGPIHEVTIAKKKDLKNPGKMLSMGYGFVQFKLKQSAKK 693
Query: 57 AIKYFNKSYLDTCRISCEIARK 78
A+K S LD + +++++
Sbjct: 694 ALKQLQHSKLDEHAVELKLSKR 715
>gi|345790896|ref|XP_543410.3| PREDICTED: probable RNA-binding protein 19 [Canis lupus familiaris]
Length = 970
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/468 (37%), Positives = 272/468 (58%), Gaps = 46/468 (9%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLF+RNLPYT+TE++L+ FSKFG +SE+H +D TK+ KG A+V + PE
Sbjct: 398 EEDLADSGRLFIRNLPYTSTEEDLQRLFSKFGPLSELHYPIDSLTKKPKGFAFVTFIFPE 457
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A RA +D +FQGR+LHV+P+ KK + + ++ +QG+ K++ +++ S +S
Sbjct: 458 HAVRAYAEVDGQVFQGRMLHVLPSTIKKEASE----DTDTQGSSYKKKKESKDKANSSSS 513
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALT 470
N WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++ L
Sbjct: 514 HN---WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLL 570
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV++ S + +A +RS V LVKNLP + EL + FG+FGSL +V+LP
Sbjct: 571 DNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLVAELQETFGRFGSLGRVLLPEGG 624
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHD 590
A+V FLEP+EA AF+ LAY ++ PLYLEWAP V S SS + + D G +
Sbjct: 625 ITAIVEFLEPLEARKAFRHLAYSKFHHTPLYLEWAPVGVFS-SSAPQTKEPQDPPAGPAE 683
Query: 591 AKRALLEQQLEGVTD---------ADIDPDRVESR--------------SLFVKNLNFKT 627
RA E + T A+ P +VE +LF+KNLNF T
Sbjct: 684 EDRAEPETVPDNETPEGEKPAEGRAEDCPAKVEEEEEEEEEEEESLPGCTLFIKNLNFST 743
Query: 628 CDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTI 686
+E L+ F K G + S + KK K G+ +SMGFGF+E+ E A + LQG +
Sbjct: 744 TEETLKGVFS---KAGMVKSCSISKKKNKAGELLSMGFGFVEYRKPEQAQKALKQLQGHV 800
Query: 687 LDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEAQRK 730
+D H L +++ + K+ + ++++K+LVRN+ F+A ++
Sbjct: 801 VDSHKLEVRISERATKPALTSTRKKQVPRKQTTSKILVRNIPFQADKR 848
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 125/228 (54%), Gaps = 19/228 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + EDR R F+ G +TD L TKDGK R+F FIGF++E+EA A+ +
Sbjct: 2 SRLIVKNLPNGMKEDRFRQLFASFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEALSALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK-KEKEVSEDEKNPVLAAKRGEKKT-- 117
FN+S++DT RI+ E + GDP PR WS+++ K K+ + +K+ V + + KT
Sbjct: 62 FNRSFIDTSRITVEFCKSFGDPTKPRAWSKHAQKTKQSKNPSKDKDFVPTEPKKDDKTKK 121
Query: 118 ----IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTL--IGLMADQKAKVSENISQAIKG 171
+EK+ E D + EFL Q R ++ WAND L L K S+ ++
Sbjct: 122 VASELEKLKE--DTEFQEFLSAHQKRTQTATWANDALDIEPLKGKSKPPASDYLNFDSDS 179
Query: 172 GEKSITLHVKSDKSNVITDSQATEKSK-NAAADELMSDMDYFKSRVKK 218
G+ +SD+ D + + K AA + +SDMDY KS++ K
Sbjct: 180 GQ-------ESDEEGAGEDPEDDDGHKPRAAVQKELSDMDYLKSKMVK 220
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 128/336 (38%), Gaps = 69/336 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP EL+E F +FG++ V + T A V + P A +A L
Sbjct: 591 ILVKNLPAGTLVAELQETFGRFGSLGRVLLPEGGIT------AIVEFLEPLEARKAFRHL 644
Query: 361 DNSIFQGRLLHV-----------------------MPARHKKSSDKQELHNSTSQGTKTL 397
S F L++ PA ++ + N T +G K
Sbjct: 645 AYSKFHHTPLYLEWAPVGVFSSSAPQTKEPQDPPAGPAEEDRAEPETVPDNETPEGEKPA 704
Query: 398 KQRREE------------ERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLD 444
+ R E+ E + G T +L F + ++ + K G+ KS +
Sbjct: 705 EGRAEDCPAKVEEEEEEEEEEEESLPGCTLFIKNLNFSTTEETLKGVFSKAGMVKSCSIS 764
Query: 445 REANDLAVRIALG----ETQVIAETKKALTNAGVNVSSLEEF---------------SAG 485
++ N +++G E + + +KAL +V + +
Sbjct: 765 KKKNKAGELLSMGFGFVEYRKPEQAQKALKQLQGHVVDSHKLEVRISERATKPALTSTRK 824
Query: 486 KTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFL 538
K K++ LV+N+P+ + + E+ ++F FG L V LP T V FL
Sbjct: 825 KQVPRKQTTSKILVRNIPFQADKREIQELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFL 884
Query: 539 EPVEAAAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
+A AF+ L + + G L LEWA S+V Q+
Sbjct: 885 TKQDAKRAFQALCHSTHLYGRRLVLEWADSEVSLQA 920
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASRA 356
+ ++ VRN+P+ A + E++E FS FG + V + T +G +V + + A RA
Sbjct: 833 TSKILVRNIPFQADKREIQELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRA 892
Query: 357 IEVLDNSI-FQGRLL 370
+ L +S GR L
Sbjct: 893 FQALCHSTHLYGRRL 907
>gi|351694750|gb|EHA97668.1| Putative RNA-binding protein 19 [Heterocephalus glaber]
Length = 955
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 171/465 (36%), Positives = 267/465 (57%), Gaps = 45/465 (9%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLFVRNLPYT+TE++L + FS +G +SE+H +D TK+ KG A+V + PE
Sbjct: 390 EEDLADSGRLFVRNLPYTSTEEDLEKLFSTYGPLSELHFPIDSLTKKPKGFAFVTFLFPE 449
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A +D +FQGR+LHV+P S+ ++E + K++++ + KA+ AS
Sbjct: 450 HAVKAYSAVDGQVFQGRMLHVLP-----STIRKEASEEAGAPGSSYKRKKDSKDKANSAS 504
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALT 470
+ WN+LFM P+ V + IARK+ +KS + D E +AVR+ALGETQ++ E ++ L
Sbjct: 505 SHN--WNTLFMGPNAVADAIARKYNATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLL 562
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV + S + +A +RS V L KNLP + EL + FG+FGSL +V+LP
Sbjct: 563 DNGVCLDSFSQAAA------ERSKTVILAKNLPAGTLAAELQETFGRFGSLGRVLLPEGG 616
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN-------- 582
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP + S ++ + +N
Sbjct: 617 VTAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPISIFSSTAPQEKAPQNPPAEPAGK 676
Query: 583 -----DAVV----------GEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKT 627
+AV E A + + + E + + + + + +LF+KNLNF T
Sbjct: 677 DRAEPEAVADSETPGTGKPAEERAAASTTKMEEEEEQEEEEENESLPGCTLFIKNLNFDT 736
Query: 628 CDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTI 686
+E L++ F K G + S V KK K G +SMGFGF+E+ E A R LQG +
Sbjct: 737 TEETLKEVFS---KAGAVRSCSVSKKKNKEGALLSMGFGFVEYRKPEHAQKALRQLQGHV 793
Query: 687 LDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEA 727
+DGH L L++ + K+ + ++++K+LVRN+ F+A
Sbjct: 794 VDGHKLELRISERATRPALTSSRKKQVPRKQTTSKILVRNIPFQA 838
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 121/219 (55%), Gaps = 4/219 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E EA+ A+ +
Sbjct: 2 SRLIVKNLPSGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEVEAQRALSH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKTI 118
FNK ++DT RI+ E + GDP PR WS+++ K + K+ +D P ++ +++
Sbjct: 62 FNKCFIDTARITVEFCKSFGDPTKPRAWSKHAQKPSEPKKSQKDSACPETKKEKKKREPS 121
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKGGEKSIT 177
E +D + EFL V Q R + WAND L + K K S+ ++ G++S
Sbjct: 122 ELEKLKEDTEFQEFLSVHQKRTQVATWANDALDTELPRGKGKSASDYLNFDSDSGQESEE 181
Query: 178 LHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRV 216
+ + + + + K K A EL SDMDY KS++
Sbjct: 182 EEEEEEAAGEELEGEQDLKPKAAVQKEL-SDMDYLKSKM 219
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ +S E+ ++F FG L V LP T V FL +A
Sbjct: 823 KQTTSKILVRNIPFQASLREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFLTKQDA 882
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 883 KRAFNALCHSTHLYGRRLVLEWADSEVTLQT 913
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRS 339
P SS K V ++ S ++ VRN+P+ A+ E+RE FS FG + V + T
Sbjct: 810 PALTSSRKKQVPRKQTTS-KILVRNIPFQASLREIRELFSTFGELKTVRLPKKMTGTGAH 868
Query: 340 KGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
+G +V + + A RA L +S GR L
Sbjct: 869 RGFGFVDFLTKQDAKRAFNALCHSTHLYGRRL 900
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P + +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 827 SKILVRNIPFQASLREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFLTKQDAKRAF 886
>gi|443723982|gb|ELU12200.1| hypothetical protein CAPTEDRAFT_225018 [Capitella teleta]
Length = 891
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 174/446 (39%), Positives = 276/446 (61%), Gaps = 32/446 (7%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+++ ESGRL+VRNL Y ED+L + F+K+G +SEVH+ +D TK+ KG A+V + PE
Sbjct: 359 EDIAESGRLYVRNLAYCCKEDDLEQLFTKYGTLSEVHLPIDSFTKKVKGFAFVSFMFPEH 418
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG 412
A +A + LD + GR+LH++P + K +++QE N S K+++ +E+KAS +G
Sbjct: 419 AVKAFQELDGKSWMGRILHILPGKEK--TEEQEDGNDES----NFKKKKLKEQKAS--AG 470
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLL--DREANDLAVRIALGETQVIAETKKALT 470
++ WN+LF+ + VV+ +A + G KSD+L D + VR+ALGET+++AET+ L
Sbjct: 471 SSHNWNTLFLGANAVVDKMAEQFGTKKSDILGVDGTKESIGVRVALGETRIVAETRAFLI 530
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV++ + + +A RS V L KNLP +S+ EL + F KFG+L +++LP +
Sbjct: 531 DNGVSLDAFSQPAAA------RSKTVILAKNLPANSTADELKEKFEKFGTLGRLLLPPSG 584
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHD 590
A++ F+EP EA AF+ LAY ++ +PLYLEWAP DV + + ++ +++ +A E +
Sbjct: 585 LSAIIEFMEPTEARMAFRSLAYTKFNHLPLYLEWAPVDVFAGPAKTEEDKREEAETKEKN 644
Query: 591 AKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV 650
AK E++ + E S+FVKN+NF+T D+ L K F K GRI+S V
Sbjct: 645 AKEDGEEKEGSEESTPR------EGCSVFVKNINFETQDDALHKLFS---KCGRIISASV 695
Query: 651 --KKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVK 707
KK +KN G +SMGFGF+E+ E+A + LQ ++LD H L L+L H +Q +
Sbjct: 696 SKKKDIKNPGSMLSMGFGFVEYAKPESAQKALKTLQHSVLDAHRLELKLSHRMTAKQQIA 755
Query: 708 KAEKD----KSSTKLLVRNVAFEAQR 729
+ +K K+S+K+LVRN+ FEA++
Sbjct: 756 QRKKTQVLGKASSKILVRNIPFEAKQ 781
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 88/177 (49%), Gaps = 41/177 (23%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LPK + E+RL++ F G IT+ +L T DG R+FAF+G+ E EA+ AIK+
Sbjct: 2 SRIIVKGLPKVIKEERLKNTFGVMGTITNCQLKYTTDGIFRRFAFVGYTKESEADAAIKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS---------------------------- 92
FN +Y+DT +I+ E+A ++ D PR WS+YS
Sbjct: 62 FNNTYIDTSKITVELANELTDAMKPRAWSKYSKDSSAYQRANKETIKEKKDAEKKERQKR 121
Query: 93 LKKEKEVSEDEK-NPVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWAND 148
K+EKE EK N +LA +G D EFLQV + + W ND
Sbjct: 122 RKEEKEQKRQEKLNALLADIQG------------DEGFDEFLQVNKSKSTKAFWGND 166
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 124/306 (40%), Gaps = 45/306 (14%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL-YAIPESASRAIEV 359
+ +NLP +T DEL+E F KFG + + + G++ ++ + P A A
Sbjct: 551 ILAKNLPANSTADELKEKFEKFGTLGRLLLP-------PSGLSAIIEFMEPTEARMAFRS 603
Query: 360 LDNSIFQGRLLH-------VMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG 412
L + F L+ V K DK+E + + K + +E +++ G
Sbjct: 604 LAYTKFNHLPLYLEWAPVDVFAGPAKTEEDKREEAETKEKNAKEDGEEKEGSEESTPREG 663
Query: 413 NTKAWNSL-FMRPDTVVENIARKHG------VSKSDLLDREANDLAVRIALGETQVIAET 465
+ ++ F D + + K G VSK + + L++ E
Sbjct: 664 CSVFVKNINFETQDDALHKLFSKCGRIISASVSKKKDIKNPGSMLSMGFGFVEYAKPESA 723
Query: 466 KKAL---TNAGVNVSSLE-----EFSAG-------KTDGLKRSNHVFLVKNLPYDSSEGE 510
+KAL ++ ++ LE +A KT L +++ LV+N+P+++ + E
Sbjct: 724 QKALKTLQHSVLDAHRLELKLSHRMTAKQQIAQRKKTQVLGKASSKILVRNIPFEAKQDE 783
Query: 511 LAKMFGKFGSLDKVILP-------STKTLALVVFLEPVEAAAAFKGLAYKRY-KGVPLYL 562
+ ++F FG L LP + A V FL +A AF L + + G L L
Sbjct: 784 VKQLFSVFGELKTARLPRKLAGSGQHRGFAFVDFLSKEDAQRAFDALCHSTHLYGRRLVL 843
Query: 563 EWAPSD 568
EWA D
Sbjct: 844 EWADPD 849
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +D ++ FS GE+ A+L R G+ R FAF+ F ++++A+ A
Sbjct: 768 SKILVRNIPFEAKQDEVKQLFSVFGELKTARLPRKLAGSGQHRGFAFVDFLSKEDAQRAF 827
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASRA 356
S ++ VRN+P+ A +DE+++ FS FG + + + + +G A+V + E A RA
Sbjct: 767 SSKILVRNIPFEAKQDEVKQLFSVFGELKTARLPRKLAGSGQHRGFAFVDFLSKEDAQRA 826
Query: 357 IEVLDNSI-FQGRLL 370
+ L +S GR L
Sbjct: 827 FDALCHSTHLYGRRL 841
>gi|405963583|gb|EKC29145.1| Putative RNA-binding protein 19 [Crassostrea gigas]
Length = 878
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 176/445 (39%), Positives = 269/445 (60%), Gaps = 28/445 (6%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
V E+GRLFVRNL Y T+++L E F KFG ++EVH+ +D TK+ +G A++L+ +PE A
Sbjct: 368 VAETGRLFVRNLAYNCTQEDLEELFGKFGPIAEVHLSIDTITKKIRGYAFILFMMPEHAV 427
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT 414
RA E LD +IF GR+LH++P + K +K+E S+ + K +Q+ E + ++
Sbjct: 428 RAYEELDGTIFMGRMLHILPGKEKLDEEKEEKEGSSYKSKKAAQQKAE--------ASSS 479
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALTNAG 473
WN++F+ + V + +A K+ KS +LD EA L VR+ALGETQ++AET+ LT G
Sbjct: 480 HNWNTMFLGINAVADVMATKYNTEKSHILDPEAPQSLGVRMALGETQIVAETRDFLTENG 539
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
V + S + +A RS V LVKNLP ++ +L ++F K G+L +V++P + A
Sbjct: 540 VVLDSFSQAAA------PRSKTVLLVKNLPANTDPEDLQEVFSKHGALGRVLMPPSGVTA 593
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST--SKGNQKNDAVVGEHDA 591
+V +L+P EA F+ LAY +++ VPLYLEWAP +V + + +K + D+ + E +A
Sbjct: 594 IVEYLDPTEAKLGFRNLAYTKFQHVPLYLEWAPMEVFRKPAVRENKKQESADSGIPEKEA 653
Query: 592 KRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVK 651
G DA +PD +LFVKNLNF T +E LR+ F + R +SV K
Sbjct: 654 GADEESSGESGEEDAGPEPD----STLFVKNLNFSTTEEGLRQKF-KKCGAIRAVSVAKK 708
Query: 652 KHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH-----AKKDEQV 705
K +KN GK +SMG+GF+EF E+A ++LQ T LDGH + L+L + +K
Sbjct: 709 KDMKNPGKYLSMGYGFVEFQKKESAMKALKELQHTELDGHMVELKLSNRTTLGTQKVTTK 768
Query: 706 VKKAEKDKSSTKLLVRNVAFEAQRK 730
K+ K + +TK+LVRN+ FEA+++
Sbjct: 769 KKQKVKKQKTTKILVRNIPFEAKKQ 793
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 17/157 (10%)
Query: 12 VTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRI 71
+ E++LR F G +TD L TK+G R FAFIG+ +E EA++AI +NK++++ CRI
Sbjct: 30 IKEEKLRSMFGSVGTLTDCSLKYTKEGVFRNFAFIGYTSETEADQAINQYNKTFINACRI 89
Query: 72 SCEIARKVGDPNMPRPWSRYS-----LKKEKEVSEDEKNPVLAAKRG-----------EK 115
E A+ D + PR WS+YS +K+++ ED++N EK
Sbjct: 90 YVEKAKDFSDSSKPRAWSKYSRDSSAFQKKQKSLEDQQNENTKNTEKKEKKEKKKKSREK 149
Query: 116 KTIEKVTE-NDDPQLLEFLQVMQPRVKSKMWANDTLI 151
E + E DDP+ EF+Q Q + +W ND ++
Sbjct: 150 VVAEMLGELKDDPKFEEFVQAHQRSMNKSVWGNDEVL 186
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPVEAAAAFKGL 550
LV+N+P+++ + E+ ++F FG L V LP S + V FL +A AF L
Sbjct: 782 LVRNIPFEAKKQEIYELFKVFGELKFVRLPKKMGGTGSHRGFGFVDFLTRQDAKRAFDAL 841
Query: 551 AYKRY-KGVPLYLEWAPS 567
+ + G L LEWA S
Sbjct: 842 CHSTHLYGRRLVLEWAES 859
>gi|444723044|gb|ELW63709.1| putative RNA-binding protein 19 [Tupaia chinensis]
Length = 1033
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 181/492 (36%), Positives = 276/492 (56%), Gaps = 67/492 (13%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +S++ Q L +SGRLFVRNLPYT+TE++L + FSK+G VSE+H
Sbjct: 477 GPPKNSARTWQGRTLGEDEEEEDLADSGRLFVRNLPYTSTEEDLEKLFSKYGPVSELHYP 536
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A+V + PE A +A +D +FQGR+LHV+P+ KK + ++ + +
Sbjct: 537 IDSLTKKPKGFAFVTFMFPEHAVKAYAQVDGQVFQGRMLHVLPSTIKKEASEE----ADA 592
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ +S + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 593 PGSSSYKKKKEAKDKANSSSSHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSV 650
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV + S + +A +RS V L KNLP + E
Sbjct: 651 AVRVALGETQLVQEVRQFLIDHGVCLDSFSQAAA------ERSKTVILAKNLPAGTLAAE 704
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L ++FG+FGSL +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP+ V
Sbjct: 705 LQELFGRFGSLGRVLLPEGGVTAIVEFLEPLEARKAFRQLAYSKFHHVPLYLEWAPTGVF 764
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADID-------------PDRVESR- 616
S + K Q A D E + E V D++ P ++E
Sbjct: 765 SSLAPRKEPQHAPAQPAGED------EAEAETVPDSETPEGEKPTGGGTEDTPAKMEEED 818
Query: 617 ----------------SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKN 659
+LF+KNLNF T +E LRK F K G + S + +K K G
Sbjct: 819 DEDEGEGEDEESSPGCTLFIKNLNFDTAEETLRKVFS---KVGMVKSCSISRKKNKAGAL 875
Query: 660 VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSS 715
+SMGFGF+E+ E A + LQG ++DGH L +++ + K+ + +++
Sbjct: 876 LSMGFGFVEYKKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAITSARKKQVSRKQTT 935
Query: 716 TKLLVRNVAFEA 727
+K+LVRN+ F+A
Sbjct: 936 SKILVRNIPFQA 947
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 127/226 (56%), Gaps = 17/226 (7%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R FS G +TD L TKDGK R+F FIGF++E+EA+ A+ +
Sbjct: 47 SRLIVKNLPNGMKEERFRQLFSTFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQTALNH 106
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + ++ S+D P K G+KK
Sbjct: 107 FNKSFIDTSRITVEFCKSFGDPTKPRAWSKHAQKPSQSRQPSKDSVPPE-TKKDGKKKVA 165
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSE---NISQAIKGG 172
+EK+ E D + EFL V Q RV++ WAND L + K++ + N G
Sbjct: 166 GELEKLKE--DTEFQEFLSVHQKRVQAATWANDALSTDASKGKSRPASDYLNFDSDSDSG 223
Query: 173 EKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKK 218
++S D+ + + AA + +SDMDY KS++ K
Sbjct: 224 QESEEERAGEDQ------GEEEDPQPKAAVQKELSDMDYLKSKMVK 263
>gi|194214277|ref|XP_001492007.2| PREDICTED: probable RNA-binding protein 19 [Equus caballus]
Length = 962
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 180/485 (37%), Positives = 275/485 (56%), Gaps = 55/485 (11%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +S+K Q L +SGRLFVRNLPYT+TE+EL + FS++G +SE+H
Sbjct: 377 GPPKNSAKPWQGRTLGENEEEEDLADSGRLFVRNLPYTSTEEELEQLFSRYGPLSELHYP 436
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A+V + PE A RA +D +FQGR+LHV+P+ KK + + ++ +
Sbjct: 437 IDGLTKKPKGFAFVTFMFPEHAVRAYAEVDGQVFQGRMLHVLPSTIKKEASE----DTDT 492
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KAS +S + WN+LFM P+ V + IA+K+ +K+ + D E +
Sbjct: 493 PGSSSYKKKKESKDKASSSSAHN--WNTLFMGPNAVADAIAQKYSATKNQVFDHETKGSV 550
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 551 AVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAE 604
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L + FG+FGSL +V+LP A+V FLEP+EA AF+ LAY ++ +PLYLEWAP V
Sbjct: 605 LQETFGRFGSLGRVLLPEGGVTAIVEFLEPLEARKAFRHLAYSKFHHIPLYLEWAPVGVF 664
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR------------------ 612
S S+ K + DA V + RA+ E +G T P
Sbjct: 665 SSSAPQK-KEPQDAPVDPAEKARAVPETVPDGKTPEGEKPTEGGADDSSAKMEEEEEEEE 723
Query: 613 -----VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGF 666
+ +LF+KNLNF T +E L+ F K G + S + +K K G +SMGFGF
Sbjct: 724 EEEESLPGCTLFIKNLNFDTTEETLKGVFS---KVGTVKSCSISRKKNKAGALLSMGFGF 780
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRN 722
+E+ E A + LQG ++D H L +++ + K+ + ++++K+LVRN
Sbjct: 781 VEYRKPEQAQKALKQLQGHVVDSHKLEVRISERATKPALTSARKKQVPRKQTTSKILVRN 840
Query: 723 VAFEA 727
+ F+A
Sbjct: 841 IPFQA 845
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 214/461 (46%), Gaps = 59/461 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R FS G +TD L TKDGK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFSAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQTALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKN--------PVLAA 110
FNKS++DT RI+ E + GDP PR WSR++ K + K+ S+D+ +
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPTKPRAWSRHAQKPSQSKQPSKDKDSVPPETKKDDKKTK 121
Query: 111 KRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIK 170
GE +EK+ E D + EFL V Q R ++ WAND L + K+K +++
Sbjct: 122 AAGE---LEKLKE--DGEFQEFLSVHQKRTQTATWANDALDTEPSKGKSKPADDY----- 171
Query: 171 GGEKSITLHVKSDKSNVITDSQATEKSK--------NAAADELMSDMDYFKSRVKKDWSD 222
L+ SD + A E + AA + +SDMDY KS++ K S
Sbjct: 172 -------LNFDSDSGQESEEEGAGEHPEEEDGSLEPKAAVQKELSDMDYLKSKMVKAESS 224
Query: 223 SESEDDSAGDDDDDDDGEEEEEE-------ENDHNGDSNEECDSIIKDSIHSGVGEEDAN 275
S E++S + + D+G E E+E + D G + I S +A
Sbjct: 225 SSEEEESEDEAVNCDEGSEAEDEDSCAIAAQQDGEGPGSGRQQGIPSRSRKP----PEAR 280
Query: 276 GEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKD 335
E P + Q+E + +R P+ TE + E + V+ + IV +
Sbjct: 281 AETERPAH--------QKEPTTPHTVKLRGAPFNVTEKNVVEFLAPLKPVA-IRIVRNAH 331
Query: 336 TKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTK 395
++ G +V ++ E +A++ + GR + V ++ +++ +++ +
Sbjct: 332 GNKT-GYVFVDFSSEEEVKKALKC-NREYMGGRYIEVFREKNIPTAEGPPKNSAKPWQGR 389
Query: 396 TLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHG 436
TL + EEE A SG N + + +E + ++G
Sbjct: 390 TLGENEEEEDLAD--SGRLFVRNLPYTSTEEELEQLFSRYG 428
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP S + V FL +A
Sbjct: 830 KQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGSHRGFGFVDFLTKQDA 889
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 890 KRAFNALCHSTHLYGRRLVLEWADSEVTLQA 920
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 834 SKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGSHRGFGFVDFLTKQDAKRAF 893
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 894 NALCHSTHLYGRRLVLEWA 912
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASRA 356
+ ++ VRN+P+ A E+RE FS FG + V + T +G +V + + A RA
Sbjct: 833 TSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGSHRGFGFVDFLTKQDAKRA 892
Query: 357 IEVLDNSI-FQGRLL 370
L +S GR L
Sbjct: 893 FNALCHSTHLYGRRL 907
>gi|449477354|ref|XP_002196178.2| PREDICTED: probable RNA-binding protein 19 [Taeniopygia guttata]
Length = 944
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 175/445 (39%), Positives = 269/445 (60%), Gaps = 30/445 (6%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
ESGRLFVRNLP+T+TE++L + FSK+G +SE+H +DK TK+ KG A++ Y IPE A +A
Sbjct: 401 ESGRLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDKLTKKPKGFAFITYMIPEHAVKA 460
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA 416
+ LD +FQGR++H++P+ + K+++ + ++ + + K+ +E + KA+ AS +
Sbjct: 461 LAELDGQVFQGRMMHLLPS----TIRKEKIEDGDAEESSSYKKSKEAKDKANSASSHN-- 514
Query: 417 WNSLFMRPDTVVENIARKHGVSKSDLLDREAND-LAVRIALGETQVIAETKKALTNAGVN 475
WN+LF+ + V + +A+K+ +KS +LD E+ D +AVR+ALGET+++ E ++ L GV+
Sbjct: 515 WNALFVGTNAVADAMAQKYNAAKSQVLDAESKDSVAVRVALGETELVQEIRRFLVENGVS 574
Query: 476 VSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALV 535
+ S + +AG +RS V LVKNLP +S EL ++FG G L +V+LP A+V
Sbjct: 575 LDSFSQ-AAG-----ERSKTVILVKNLPAGTSALELEQLFGHHGGLGRVLLPEGGITAIV 628
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK------GNQKNDAVV-GE 588
FLEP EA AF LAY ++ VPLYLEWAP V + K G + +V GE
Sbjct: 629 EFLEPTEAKQAFTRLAYSKFHSVPLYLEWAPMGVFLSPAPQKKKAGVPGKEDEAGLVPGE 688
Query: 589 HDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSV 648
Q E + + + + + +LF+KNLNF T ++ L++ F K G + S
Sbjct: 689 ATKDSEEAAAQEEEEEEEEEEEENIPGCTLFIKNLNFATTEDTLKETFS---KVGALKSC 745
Query: 649 KV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH-----AKKD 702
+ KK K G +SMGFGF+E+ E+A R LQG +DGH L ++L A K
Sbjct: 746 TISKKKDKAGTLLSMGFGFVEYKKPESAQKALRQLQGCTVDGHKLEVKLSERAVRPAVKS 805
Query: 703 EQVVKKAEKDKSSTKLLVRNVAFEA 727
+ + A+K K+S K+LVRN+ F+A
Sbjct: 806 TRKKQIAKKQKTS-KILVRNIPFQA 829
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 126/239 (52%), Gaps = 35/239 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDG+ R+F FIG+++E EA+ A+ +
Sbjct: 2 SRLIVKNLPSGMKEERFRKLFAAFGTLTDCCLKYTKDGRFRKFGFIGYKSEDEAQAALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK---KEKEVSEDEKNPVLAAKRGEKKT 117
FNKS++DT R++ E+ + GDP P+ WS++S K EK+ E + A + KK
Sbjct: 62 FNKSFIDTSRLTVELCKSFGDPTKPKAWSKHSQKAPASEKQTKEPLASAAPAGTKKGKKK 121
Query: 118 IEKVTE----NDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
+ V +D EFL V Q R + WANDTL ++ K G+
Sbjct: 122 KDAVDNLKELKEDKTFQEFLVVHQKRSQVATWANDTL---------------AEEPKKGK 166
Query: 174 KSIT--LHVKSDKSNVITDS-----------QATEKSKNAAADELMSDMDYFKSRVKKD 219
S L+ SD+S +++ + ++ K AA + +SDMDY KS+V KD
Sbjct: 167 SSAADYLNFDSDESEELSEGGDEPSEDEEEIKGKKEGKKAATSKDLSDMDYLKSKVVKD 225
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTK 337
V P S+ K + ++ ++ ++ VRN+P+ AT E+RE FS FG + V + T
Sbjct: 799 VRPAVKSTRKKQIAKKQ-KTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTG 857
Query: 338 RSKGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
+G +V + + A +A + L +S GR L
Sbjct: 858 SHRGFGFVDFVTKQDAKKAFQALCHSTHLYGRRL 891
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPVEA 543
K+ LV+N+P+ ++ E+ ++F FG L V LP S + V F+ +A
Sbjct: 814 KQKTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFVTKQDA 873
Query: 544 AAAFKGLAYKRY-KGVPLYLEWA 565
AF+ L + + G L LEWA
Sbjct: 874 KKAFQALCHSTHLYGRRLVLEWA 896
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P T +R+ FS GE+ +L + G R F F+ F T+Q+A++A
Sbjct: 818 SKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFVTKQDAKKAF 877
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ + ++L R+ E A
Sbjct: 878 QALCHSTHLYGRRLVLEWA 896
>gi|440474273|gb|ELQ43025.1| multiple RNA-binding domain-containing protein 1 [Magnaporthe
oryzae Y34]
gi|440485469|gb|ELQ65427.1| multiple RNA-binding domain-containing protein 1 [Magnaporthe
oryzae P131]
Length = 831
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 249/773 (32%), Positives = 373/773 (48%), Gaps = 98/773 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI V+NLP +TE R F+ KG EITD KL+ R+ ++GF++ Q A +A K
Sbjct: 4 SRIFVRNLPPNITEADFRKHFASKGQEITDLKLI-----PKRRIGYVGFKSPQLAADAAK 58
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAK----RGEK 115
Y+N+SY+ +I+ EIAR + DP++P + + EK AAK K
Sbjct: 59 YYNRSYIRMSKIAVEIARPISDPSLPASKKVVTAQAIVAAHTTEKEAARAAKPEAESAPK 118
Query: 116 KTIEKVTEND--DPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
K K E D DP L E+L+ M + + +I + ADQ N S+A+ G E
Sbjct: 119 KQKRKRDELDMADPNLKEYLETMNLKPGGAAAESSAMI-VDADQSGA---NPSEALVGLE 174
Query: 174 KSI-----TLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDD 228
+ + K + AT + AA E++ + + ++ +D+ ++ D
Sbjct: 175 NESDDEYEEIPARPVKRQAVEAKDATAAAVKAAPAEVLPPSE---APAPQESADASAQAD 231
Query: 229 SAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHS----GVGEEDANGEIVDPGNP 284
+DDD +N D + D + V E A V P
Sbjct: 232 VKPANDDDW-----------LRSRTNRLLDLVDPDDPKALQPVSVDEGPAPVLKVAPETD 280
Query: 285 SSSSKDVQQE-----------------VLESGRLFVRNLPYTATEDELREHFSKFGNVSE 327
S DVQ+E + ++ RLFVRNLPY+ATED+L+ F FG + E
Sbjct: 281 QSPQDDVQEEQTKPVPEKVQKDDPVESIRKTSRLFVRNLPYSATEDDLKSVFGAFGPLDE 340
Query: 328 VHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELH 387
+H+ SKGIA++ Y+ SA A + LD FQGR+LHV+P + K+ D+ +
Sbjct: 341 IHLSHAGREGTSKGIAFIQYSESSSAVDAFQKLDGCDFQGRILHVLPGQAKRVLDEYAIS 400
Query: 388 NSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA 447
LK++++ +RKA EA+ WN+L+M D V +A + GVSKS L D +
Sbjct: 401 QL------PLKKQQQLKRKA-EAATKRFNWNALYMSQDAVNAAVAERLGVSKSALFDPSS 453
Query: 448 NDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSS 507
+D V+ A+ ET I E K + GV++ + G T LVKN + ++
Sbjct: 454 SDAGVKQAIAETSTIEEVKSYFASNGVDLDAFRHKERGDT--------TILVKNFSHGTT 505
Query: 508 EGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPS 567
EL K F ++G L +V++P + T+A+V F A AFK LAY ++K LYLE AP
Sbjct: 506 LDELKKTFEEYGPLTRVLMPPSATIAIVQFSHAAHAKTAFKKLAYSKFKSSLLYLEMAPK 565
Query: 568 DVLSQ--SSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNF 625
DV T++ K V E LLE+ DA+ ++ E+ SLFVK LNF
Sbjct: 566 DVFKNVPEPTAQEQGKQKLSVTE------LLERD-----DAE---EQGETTSLFVKGLNF 611
Query: 626 KTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDL 682
T E L + F EG +S +VK K G+ +SMGFGF+EF S E A + +
Sbjct: 612 ATTTEKLAETF--QSLEG-FVSARVKTKTDPKKPGQVLSMGFGFVEFRSKELAQAALKVM 668
Query: 683 QGTILDGHALILQLCH----AKKDEQVVKKAEKDKSS-TKLLVRNVAFEAQRK 730
L+GH L ++ H A ++ + KA+K TK++V+N+ FEA +K
Sbjct: 669 DNYNLEGHTLTVRASHRGLDAAEERRREDKAKKQAGQRTKIVVKNLPFEATKK 721
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ VKNL F+ +++R FG + G++ SV+V K N +N + GF F EF + + A N
Sbjct: 709 IVVKNLPFEATKKDVRTLFGTY---GQLRSVRVPK---NFENRTRGFAFAEFTTPKEAEN 762
Query: 678 VCRDLQGTILDGHALIL 694
L+ T L G L+L
Sbjct: 763 ALNALKNTHLLGRKLVL 779
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ V+NLP+ AT+ ++R F +G + V + + + R++G A+ + P+ A A+
Sbjct: 708 KIVVKNLPFEATKKDVRTLFGTYGQLRSVRVPKNFEN-RTRGFAFAEFTTPKEAENALNA 766
Query: 360 LDNSIFQGRLL 370
L N+ GR L
Sbjct: 767 LKNTHLLGRKL 777
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I VKNLP T+ +R F G++ ++ + + ++R FAF F T +EAE A+
Sbjct: 707 TKIVVKNLPFEATKKDVRTLFGTYGQLRSVRVPKNFENRTRGFAFAEFTTPKEAENALNA 766
Query: 61 FNKSYL 66
++L
Sbjct: 767 LKNTHL 772
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLA 551
+VKNLP+++++ ++ +FG +G L V +P T+ A F P EA A L
Sbjct: 709 IVVKNLPFEATKKDVRTLFGTYGQLRSVRVPKNFENRTRGFAFAEFTTPKEAENALNALK 768
Query: 552 YKRYKGVPLYLEW 564
G L L++
Sbjct: 769 NTHLLGRKLVLDF 781
>gi|389632927|ref|XP_003714116.1| multiple RNA-binding domain-containing protein 1, partial
[Magnaporthe oryzae 70-15]
gi|351646449|gb|EHA54309.1| multiple RNA-binding domain-containing protein 1, partial
[Magnaporthe oryzae 70-15]
Length = 867
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 249/773 (32%), Positives = 373/773 (48%), Gaps = 98/773 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI V+NLP +TE R F+ KG EITD KL+ R+ ++GF++ Q A +A K
Sbjct: 40 SRIFVRNLPPNITEADFRKHFASKGQEITDLKLI-----PKRRIGYVGFKSPQLAADAAK 94
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAK----RGEK 115
Y+N+SY+ +I+ EIAR + DP++P + + EK AAK K
Sbjct: 95 YYNRSYIRMSKIAVEIARPISDPSLPASKKVVTAQAIVAAHTTEKEAARAAKPEAESAPK 154
Query: 116 KTIEKVTEND--DPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
K K E D DP L E+L+ M + + +I + ADQ N S+A+ G E
Sbjct: 155 KQKRKRDELDMADPNLKEYLETMNLKPGGAAAESSAMI-VDADQSGA---NPSEALVGLE 210
Query: 174 KSI-----TLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDD 228
+ + K + AT + AA E++ + + ++ +D+ ++ D
Sbjct: 211 NESDDEYEEIPARPVKRQAVEAKDATAAAVKAAPAEVLPPSE---APAPQESADASAQAD 267
Query: 229 SAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHS----GVGEEDANGEIVDPGNP 284
+DDD +N D + D + V E A V P
Sbjct: 268 VKPANDDDW-----------LRSRTNRLLDLVDPDDPKALQPVSVDEGPAPVLKVAPETD 316
Query: 285 SSSSKDVQQE-----------------VLESGRLFVRNLPYTATEDELREHFSKFGNVSE 327
S DVQ+E + ++ RLFVRNLPY+ATED+L+ F FG + E
Sbjct: 317 QSPQDDVQEEQTKPVPEKVQKDDPVESIRKTSRLFVRNLPYSATEDDLKSVFGAFGPLDE 376
Query: 328 VHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELH 387
+H+ SKGIA++ Y+ SA A + LD FQGR+LHV+P + K+ D+ +
Sbjct: 377 IHLSHAGREGTSKGIAFIQYSESSSAVDAFQKLDGCDFQGRILHVLPGQAKRVLDEYAIS 436
Query: 388 NSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA 447
LK++++ +RKA EA+ WN+L+M D V +A + GVSKS L D +
Sbjct: 437 QL------PLKKQQQLKRKA-EAATKRFNWNALYMSQDAVNAAVAERLGVSKSALFDPSS 489
Query: 448 NDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSS 507
+D V+ A+ ET I E K + GV++ + G T LVKN + ++
Sbjct: 490 SDAGVKQAIAETSTIEEVKSYFASNGVDLDAFRHKERGDT--------TILVKNFSHGTT 541
Query: 508 EGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPS 567
EL K F ++G L +V++P + T+A+V F A AFK LAY ++K LYLE AP
Sbjct: 542 LDELKKTFEEYGPLTRVLMPPSATIAIVQFSHAAHAKTAFKKLAYSKFKSSLLYLEMAPK 601
Query: 568 DVLSQ--SSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNF 625
DV T++ K V E LLE+ DA+ ++ E+ SLFVK LNF
Sbjct: 602 DVFKNVPEPTAQEQGKQKLSVTE------LLERD-----DAE---EQGETTSLFVKGLNF 647
Query: 626 KTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDL 682
T E L + F EG +S +VK K G+ +SMGFGF+EF S E A + +
Sbjct: 648 ATTTEKLAETF--QSLEG-FVSARVKTKTDPKKPGQVLSMGFGFVEFRSKELAQAALKVM 704
Query: 683 QGTILDGHALILQLCH----AKKDEQVVKKAEKDKSS-TKLLVRNVAFEAQRK 730
L+GH L ++ H A ++ + KA+K TK++V+N+ FEA +K
Sbjct: 705 DNYNLEGHTLTVRASHRGLDAAEERRREDKAKKQAGQRTKIVVKNLPFEATKK 757
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ VKNL F+ +++R FG + G++ SV+V K N +N + GF F EF + + A N
Sbjct: 745 IVVKNLPFEATKKDVRTLFGTY---GQLRSVRVPK---NFENRTRGFAFAEFTTPKEAEN 798
Query: 678 VCRDLQGTILDGHALIL 694
L+ T L G L+L
Sbjct: 799 ALNALKNTHLLGRKLVL 815
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ V+NLP+ AT+ ++R F +G + V + + + R++G A+ + P+ A A+
Sbjct: 744 KIVVKNLPFEATKKDVRTLFGTYGQLRSVRVPKNFEN-RTRGFAFAEFTTPKEAENALNA 802
Query: 360 LDNSIFQGRLL 370
L N+ GR L
Sbjct: 803 LKNTHLLGRKL 813
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I VKNLP T+ +R F G++ ++ + + ++R FAF F T +EAE A+
Sbjct: 743 TKIVVKNLPFEATKKDVRTLFGTYGQLRSVRVPKNFENRTRGFAFAEFTTPKEAENALNA 802
Query: 61 FNKSYL 66
++L
Sbjct: 803 LKNTHL 808
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGN-VSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
++S R+FVRNLP TE + R+HF+ G ++++ ++ KR I YV + P+ A
Sbjct: 36 TMDSSRIFVRNLPPNITEADFRKHFASKGQEITDLKLI----PKRR--IGYVGFKSPQLA 89
Query: 354 SRAIEVLDNSIFQGRLLHVMPAR 376
+ A + + S + + V AR
Sbjct: 90 ADAAKYYNRSYIRMSKIAVEIAR 112
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLA 551
+VKNLP+++++ ++ +FG +G L V +P T+ A F P EA A L
Sbjct: 745 IVVKNLPFEATKKDVRTLFGTYGQLRSVRVPKNFENRTRGFAFAEFTTPKEAENALNALK 804
Query: 552 YKRYKGVPLYLEW 564
G L L++
Sbjct: 805 NTHLLGRKLVLDF 817
>gi|330842446|ref|XP_003293189.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
gi|325076506|gb|EGC30286.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
Length = 880
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 172/473 (36%), Positives = 274/473 (57%), Gaps = 48/473 (10%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
+++V +SGR+F+RNL YT E++L + FSK+G +SE+HI ++ ++K+S GIA++LY IPE
Sbjct: 336 EEDVGDSGRIFIRNLSYTTKEEDLEKVFSKYGKISEIHIPINYESKQSIGIAFILYLIPE 395
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
+A A+ +D +FQGR++HV+PA K++ K + + S G+ + K +E+E+K++ S
Sbjct: 396 NAVTALNEMDGKVFQGRIIHVLPA--KQAPAKTPVLDGASAGS-SYKSEKEKEQKSN--S 450
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTN 471
G+T WN+LFMR D +V ++A ++ +++ LLD DLAVR+ L ET VI ETKK L
Sbjct: 451 GSTHNWNALFMRSDAIVSSLAERYKMTQGQLLDPNQVDLAVRMTLMETHVINETKKFLEE 510
Query: 472 AGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT 531
GV ++ + G KRSN LVKN+P+ + E EL +F KFG L +V+L +T
Sbjct: 511 QGVIITDI------GNKGSKRSNTTLLVKNIPFKTDEEELELLFSKFGELARVVLAPART 564
Query: 532 LALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDA 591
+AL+ +L P EA + FK LAY ++ VPLYLEWAP V + + + A D+
Sbjct: 565 IALIEYLHPNEAKSGFKNLAYTKFHHVPLYLEWAPEGVFKNPAPPRDPKPKQATAKTTDS 624
Query: 592 KR--------ALLEQQLEGVTDADI--DPDRVESRS----------LFVKNLNFKTCDEN 631
R + E + + D P + +++S +F+KNLN+KT +E
Sbjct: 625 SRKETSTKETSTKETSTKETSTKDTKEQPKQKDTKSSSTNQETHQFVFIKNLNWKTSNET 684
Query: 632 LRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGH 690
L F + +K+ +++ K + K G+ + GFGFIEF S + A + L G +D H
Sbjct: 685 LEGKF-KSLKDFISVNIATKPNPKKPGERLPCGFGFIEFSSKQGAYECIKRLNGATIDDH 743
Query: 691 ALILQLCHAKKDEQVVKKAE-------------KDKSSTKLLVRNVAFEAQRK 730
+ L+L + K+E VK E K K S+K++++N+ FE+ K
Sbjct: 744 EISLKL--SDKNEVNVKAKEMPENKRSSLPQNAKSKPSSKIIIKNLPFESTTK 794
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++ ++NLP+ +T E+R+ F+ +G + V I K +G +V + E A A+
Sbjct: 779 SSKIIIKNLPFESTTKEIRKLFAAYGEIQSVRI-PKKPNGGHRGFGFVEFLTEEEAKNAM 837
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSD 382
E L +S F GR L + A K+ D
Sbjct: 838 EALGSSHFYGRHLVLQYAEQDKNVD 862
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S+I +KNLP T +R F+ GEI ++ + +G R F F+ F TE+EA+ A++
Sbjct: 780 SKIIIKNLPFESTTKEIRKLFAAYGEIQSVRIPKKPNGGHRGFGFVEFLTEEEAKNAMEA 839
Query: 61 FNKSYL 66
S+
Sbjct: 840 LGSSHF 845
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S + +KNL F++ + +RK F + G I SV++ K G GFGF+EF + E
Sbjct: 779 SSKIIIKNLPFESTTKEIRKLFAAY---GEIQSVRIPKKPNGGHR---GFGFVEFLTEEE 832
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKDEQV 705
A N L + G L+LQ +A++D+ V
Sbjct: 833 AKNAMEALGSSHFYGRHLVLQ--YAEQDKNV 861
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPST-----KTLALVVFLEPVEAAAAFKGLA 551
++KNLP++S+ E+ K+F +G + V +P + V FL EA A + L
Sbjct: 782 IIIKNLPFESTTKEIRKLFAAYGEIQSVRIPKKPNGGHRGFGFVEFLTEEEAKNAMEALG 841
Query: 552 YKRYKGVPLYLEWAPSD 568
+ G L L++A D
Sbjct: 842 SSHFYGRHLVLQYAEQD 858
>gi|344295376|ref|XP_003419388.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
19-like [Loxodonta africana]
Length = 1089
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 172/465 (36%), Positives = 275/465 (59%), Gaps = 46/465 (9%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLFVRNLPYT+TE+EL + FSK+G +SE+H +D TK+ KG A++ + PE
Sbjct: 395 EEDLADSGRLFVRNLPYTSTEEELEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPE 454
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A +D +FQGR+LHV+P+ KK + + ++ + G + K+++E + KA+ +S
Sbjct: 455 HAVKAYAEVDGQVFQGRMLHVLPSTIKKEASE----DADTPGASSYKKKKELKDKANSSS 510
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALT 470
+ WN+LF+ P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ + ++ L
Sbjct: 511 SHN--WNTLFVGPNAVADAIAQKYSATKSQVFDHETKGSVAVRVALGETQLVQDVRRFLI 568
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV + S + +A +RS V LVKNLP + EL + FG+FGSL +V+LP
Sbjct: 569 DNGVCLDSFSQAAA------ERSKTVMLVKNLPAGTLAAELQETFGRFGSLGRVLLPEGG 622
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQK--------- 581
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V S SS K +
Sbjct: 623 ITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPMGVFSSSSPQKREPRDTPEDTDKV 682
Query: 582 -------NDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRK 634
N+ GE +R + + + + + + + + +LF+KNLNF T + L++
Sbjct: 683 EPETVPGNETPEGEKPVERGEDDSSAK-MEEEEEEEESLPGCTLFIKNLNFDTTEATLKE 741
Query: 635 HFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALI 693
F K G + S + +K K G +SMGFGF+E+ E A R LQG ++DGH L
Sbjct: 742 VFS---KVGMVKSCSISRKKNKAGALLSMGFGFVEYRKPEHAQKALRQLQGHVVDGHKLE 798
Query: 694 LQLCH--------AKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
L++ + + +QV +K ++++K+LVRN+ F+A +
Sbjct: 799 LRISERAIKPATTSTRKKQVARK----QTTSKILVRNIPFQAHSR 839
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 209/463 (45%), Gaps = 65/463 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R FS G +TD L TKDGK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFSSFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQTALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKTI 118
FNKS++DT RI+ E + GDP PR WS+++ K + K S+D +P +KK
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPTRPRAWSKHAQKPSQPKPPSKDPISPETKQDNKKKKVA 121
Query: 119 EKVTE-NDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSIT 177
++ + D + EFL V Q R ++ WAND + ++ +KG K
Sbjct: 122 SELEKLKGDTEFREFLSVHQKRTQAATWANDAV--------------DTEPVKGKTKPA- 166
Query: 178 LHVKSDKSNVITDSQATEK--------------SKNAAADELMSDMDYFKSR-VKKDWSD 222
SD N +DS + + AA + +SDMDY KS+ VK + S
Sbjct: 167 ----SDYLNFDSDSGQESEEEGPGEGPEAEEDLTPKAAVQKELSDMDYLKSKMVKAELSS 222
Query: 223 SESEDDSAGDDDDDDDGEEEEEE---------ENDHNGDSNEECDSIIKDSIHSGVGEED 273
S SE++S + + ++G E+E E E + G +E K+ E +
Sbjct: 223 SSSEEESEDEAVNCEEGSEDEGEASSATPAKPEIERKGAGHEHGAPSGKEQPLEARAETE 282
Query: 274 ANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD 333
DP P + + +R P+ TE + E + V+ + IV +
Sbjct: 283 KPATQKDPTTPYT--------------VKLRGAPFNVTEKNVTEFLAPLKPVA-IRIVRN 327
Query: 334 KDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQG 393
++ G +V ++ E +A++ + GR + V + ++ H +
Sbjct: 328 SHGNKT-GYIFVDFSSEEEVKKALKC-NREYMGGRYIEVFREKSSPTAKGPLKHGAKPWQ 385
Query: 394 TKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHG 436
+TL + EEE A SG N + + +E + K+G
Sbjct: 386 GRTLGENEEEEDLAD--SGRLFVRNLPYTSTEEELEKLFSKYG 426
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 128/329 (38%), Gaps = 62/329 (18%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP EL+E F +FG++ V + T A V + P A +A L
Sbjct: 589 MLVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT------AIVEFLEPLEARKAFRHL 642
Query: 361 DNSIFQGRLLHV----MPARHKKSSDKQELHNS----------TSQGTKTLKQRREEERK 406
S F L++ M S K+E ++ T G +T + + ER
Sbjct: 643 AYSKFHHVPLYLEWAPMGVFSSSSPQKREPRDTPEDTDKVEPETVPGNETPEGEKPVERG 702
Query: 407 ASEASGNTKAWN---------SLFMR------PDTVVENIARKHGVSKSDLLDREANDLA 451
++S + +LF++ + ++ + K G+ KS + R+ N
Sbjct: 703 EDDSSAKMEEEEEEEESLPGCTLFIKNLNFDTTEATLKEVFSKVGMVKSCSISRKKNKAG 762
Query: 452 VRIALG----ETQVIAETKKALTNAGVNVSSLEEF---------------SAGKTDGLKR 492
+++G E + +KAL +V + + K K+
Sbjct: 763 ALLSMGFGFVEYRKPEHAQKALRQLQGHVVDGHKLELRISERAIKPATTSTRKKQVARKQ 822
Query: 493 SNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEAAA 545
+ LV+N+P+ + E+ ++F FG L V LP T V FL +A
Sbjct: 823 TTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTGAHRGFGFVDFLTKQDAKR 882
Query: 546 AFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 883 AFNALCHSTHLYGRRLVLEWADSEVTVQA 911
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 11/129 (8%)
Query: 252 DSNEECDSIIKDSIHSGVGEEDANGE-IVDPGNPSSSSK----DVQQEVLESGRLFVRNL 306
D+ E+ D + +++ G E GE V+ G SS+K + ++E L LF++NL
Sbjct: 674 DTPEDTDKVEPETV---PGNETPEGEKPVERGEDDSSAKMEEEEEEEESLPGCTLFIKNL 730
Query: 307 PYTATEDELREHFSKFGNVSEVHIVVDKDTK---RSKGIAYVLYAIPESASRAIEVLDNS 363
+ TE L+E FSK G V I K+ S G +V Y PE A +A+ L
Sbjct: 731 NFDTTEATLKEVFSKVGMVKSCSISRKKNKAGALLSMGFGFVEYRKPEHAQKALRQLQGH 790
Query: 364 IFQGRLLHV 372
+ G L +
Sbjct: 791 VVDGHKLEL 799
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTK 337
+ P S+ K V ++ S ++ VRN+P+ A E+RE FS FG + V + T
Sbjct: 806 IKPATTSTRKKQVARKQTTS-KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTG 864
Query: 338 RSKGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
+G +V + + A RA L +S GR L
Sbjct: 865 AHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRL 898
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 825 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTGAHRGFGFVDFLTKQDAKRAF 884
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 885 NALCHSTHLYGRRLVLEWA 903
>gi|426247328|ref|XP_004017438.1| PREDICTED: probable RNA-binding protein 19 [Ovis aries]
Length = 916
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 176/463 (38%), Positives = 274/463 (59%), Gaps = 43/463 (9%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLFVRNLPYT++E++L + FS++G +SE+H +D TK+ KG A+V + PE
Sbjct: 353 EEDLADSGRLFVRNLPYTSSEEDLEKLFSRYGPLSELHYPIDSLTKKPKGFAFVTFMFPE 412
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A +D +FQGR+LHV+P+ KK + + ++ + G+ + K+++E + KA+ +S
Sbjct: 413 HAVKAYAEVDGQVFQGRMLHVLPSTVKKEASE----DADAPGSSSYKKKKESKDKANSSS 468
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALT 470
+ WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++ L
Sbjct: 469 SHN--WNTLFMGPNAVADAIAQKYSATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLL 526
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV + S + +A +RS V LVKNLP + EL + F +FGSL +V+LP
Sbjct: 527 DNGVCLDSFSQAAA------ERSKTVILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGG 580
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVV---- 586
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V S S T + Q DA V
Sbjct: 581 ITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPMGVFS-SPTPQKEQPQDAPVEPAG 639
Query: 587 -----GEHDAKRALLEQQLE-GVTDADI-----------DPDRVESRSLFVKNLNFKTCD 629
E DA+ EQ ++ DA + + + +LF+KNLNF T +
Sbjct: 640 TDRMEPETDAETPECEQPMDRAAHDASAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTE 699
Query: 630 ENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILD 688
E L+ F K G + S + KK K G +SMGFGF+E+ E A + LQG ++D
Sbjct: 700 ETLKGVFS---KVGAVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVD 756
Query: 689 GHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEA 727
GH L +++ + K+A + ++++K+LVRN+ F+A
Sbjct: 757 GHKLEVRISERATKPALTAARKKQAPRKQTTSKILVRNIPFQA 799
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 116/221 (52%), Gaps = 6/221 (2%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQTALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNKS++DT RI+ E + GDP PR WS+++ K + + ++ + + +K
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPTKPRAWSKHAQKSSQSKPPPKDKDAISTEAKKDDKKKK 121
Query: 121 VTE-----NDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
V DD + EFL V Q R + WAND L + K+K + N
Sbjct: 122 VAGELEKLKDDNEFQEFLSVHQKRTQVATWANDALDAEPSKGKSKPA-NDYLNFDSDSGQ 180
Query: 176 ITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRV 216
+ + +++ + K AA + +SDMDY KS+V
Sbjct: 181 ESEEEEDGENSEEEEDGLKPKEPKAAVQKELSDMDYLKSKV 221
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 133/334 (39%), Gaps = 67/334 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP EL+E FS+FG++ V + T A V + P A +A L
Sbjct: 547 ILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGGIT------AIVEFLEPLEARKAFRHL 600
Query: 361 DNSIFQGRLLHV----MPARHKKSSDKQELHNSTSQ--GTKTLKQRREEE---------R 405
S F L++ M + K++ ++ + GT ++ + E R
Sbjct: 601 AYSKFHHVPLYLEWAPMGVFSSPTPQKEQPQDAPVEPAGTDRMEPETDAETPECEQPMDR 660
Query: 406 KASEASGNTKAWN-------------SLFMR------PDTVVENIARKHGVSKSDLLDRE 446
A +AS + +LF++ + ++ + K G KS + ++
Sbjct: 661 AAHDASAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEETLKGVFSKVGAVKSCSISKK 720
Query: 447 ANDLAVRIALG----ETQVIAETKKALTNAGVNV-------------SSLEEFSAG--KT 487
N V +++G E + + +KAL +V ++ +A K
Sbjct: 721 KNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPALTAARKKQ 780
Query: 488 DGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEP 540
K++ LV+N+P+ + E+ ++F FG L V LP T V FL
Sbjct: 781 APRKQTTSKILVRNIPFQADSHEIRELFSTFGELKTVRLPKKVTGTGTHRGFGFVDFLTK 840
Query: 541 VEAAAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
+A AF L + + G L LEWA S+V Q+
Sbjct: 841 QDAKRAFNALCHSTHLYGRRLVLEWADSEVSLQA 874
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 788 SKILVRNIPFQADSHEIRELFSTFGELKTVRLPKKVTGTGTHRGFGFVDFLTKQDAKRAF 847
>gi|66809481|ref|XP_638463.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996868|sp|Q54PB2.1|MRD1_DICDI RecName: Full=Multiple RNA-binding domain-containing protein 1;
AltName: Full=RNA-binding motif protein 19 homolog;
AltName: Full=RNA-binding protein 19 homolog
gi|60467060|gb|EAL65101.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 895
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 170/466 (36%), Positives = 270/466 (57%), Gaps = 39/466 (8%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
++V ESGR+FVRNL Y+ E++L + FSKFG +SE+HI +D D+K+SKGIA++LY IPE+
Sbjct: 355 EDVGESGRIFVRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIAFILYLIPEN 414
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR----HKKSSDKQELHNSTSQGTKTLKQRREEERKAS 408
A +A+ +D +FQGRL+HV+P + + S +K +N G+ + K +E+++K +
Sbjct: 415 AVQALNDMDGKVFQGRLIHVLPGKAAPAKQFSENKDNNNNGAEGGSSSFKAEKEQKQKTT 474
Query: 409 EASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKA 468
SG+T WN+LFMR D +V ++A ++ +++ LLD DLAVR+ L ET VI ETKK
Sbjct: 475 --SGSTHNWNALFMRSDAIVSSLAERYKMTQGQLLDPNQMDLAVRMTLMETHVINETKKF 532
Query: 469 LTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS 528
L + GV + + G KRSN V LVKN+P+ + E EL ++F KFG L +V+L
Sbjct: 533 LEDQGVIIQDI------GNKGSKRSNTVLLVKNIPFKTQEHELHELFSKFGELSRVVLSP 586
Query: 529 TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS----TSKGNQKNDA 584
+T+AL+ ++ P EA FK LAY ++ VPLYLEWAP V + K + +
Sbjct: 587 ARTIALIEYIHPNEAKVGFKNLAYSKFHHVPLYLEWAPEGVFKLPAPPKEIKKSEKSEKS 646
Query: 585 VVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGR 644
+D K + T ++ +++KNLN+KT +E L F + +K+
Sbjct: 647 SDSSNDKKEVESTTKTAATTTTTKKGTDNNTQFVYIKNLNWKTTNETLVGKF-KSLKDYV 705
Query: 645 ILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDE 703
+++ K + KN + + GFGFIEF S + A + L G+ +DG+ + L+L + K+E
Sbjct: 706 NVNIATKANPKNPSERLPCGFGFIEFSSKQGAYECIKKLNGSSIDGYEISLKL--SDKNE 763
Query: 704 QVVKKAEK-------------------DKSSTKLLVRNVAFEAQRK 730
V++ K +K S+K++++N+ FE+ K
Sbjct: 764 TNVQEINKRRELPENSKQSIKSNGGQPNKPSSKIIIKNLPFESTIK 809
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 581 KNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHI 640
KN+ V E + +R L E + + P++ S+ + +KNL F++ + +RK F +
Sbjct: 761 KNETNVQEINKRRELPENSKQSIKSNGGQPNKPSSK-IIIKNLPFESTIKEIRKLFTAY- 818
Query: 641 KEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
G I SV++ K G GFGF+EF + E A N L + G L+LQ +A+
Sbjct: 819 --GEIQSVRIPKKPNGG---HRGFGFVEFLTEEEAKNAMEALGNSHFYGRHLVLQ--YAE 871
Query: 701 KDEQV 705
+D+ +
Sbjct: 872 QDKNI 876
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++ ++NLP+ +T E+R+ F+ +G + V I K +G +V + E A A+
Sbjct: 794 SSKIIIKNLPFESTIKEIRKLFTAYGEIQSVRI-PKKPNGGHRGFGFVEFLTEEEAKNAM 852
Query: 358 EVLDNSIFQGRLLHVMPA---------RHKKSSDKQELHNST 390
E L NS F GR L + A R K + D +++ NST
Sbjct: 853 EALGNSHFYGRHLVLQYAEQDKNIDELREKANLDYEKIKNST 894
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S+I +KNLP T +R F+ GEI ++ + +G R F F+ F TE+EA+ A++
Sbjct: 795 SKIIIKNLPFESTIKEIRKLFTAYGEIQSVRIPKKPNGGHRGFGFVEFLTEEEAKNAMEA 854
Query: 61 FNKSYL 66
S+
Sbjct: 855 LGNSHF 860
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
++KNLP++S+ E+ K+F +G + V +P + V FL EA A + L
Sbjct: 798 IIKNLPFESTIKEIRKLFTAYGEIQSVRIPKKPNGGHRGFGFVEFLTEEEAKNAMEALGN 857
Query: 553 KRYKGVPLYLEWAPSD 568
+ G L L++A D
Sbjct: 858 SHFYGRHLVLQYAEQD 873
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ + R+ V+ LP T+ +EHF KFG V++ I+ K +S+ ++ ++ +SA
Sbjct: 1 MSNTRICVKQLPKHLTDKRFKEHFEKFGTVTDAKII--KKDGKSRLFGFIGFSTEQSAKN 58
Query: 356 AIEV 359
A+ +
Sbjct: 59 ALSL 62
>gi|417405465|gb|JAA49443.1| Putative rna-binding protein rrm superfamily [Desmodus rotundus]
Length = 968
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 173/461 (37%), Positives = 269/461 (58%), Gaps = 40/461 (8%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLFVRNLPYT+TE++L + FSKFG +SE+H +D TK+ KG A+V + PE
Sbjct: 397 EEDLADSGRLFVRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFMFPE 456
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A +D +FQGR+LHV+P+ +K + + ++++ G+ + K+++E + KA+ +S
Sbjct: 457 HAVKAYAEVDGQVFQGRMLHVLPSTIRKEASE----DASTPGSSSYKKKKEAKDKANSSS 512
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALT 470
+ WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++ L
Sbjct: 513 SHN--WNTLFMGPNAVADAIAQKYSATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLI 570
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV++ S + +A +RS V L KNLP + EL ++FG+FGSL +V+LP
Sbjct: 571 DNGVSLDSFSQAAA------ERSKTVILAKNLPAGTLAAELQEIFGRFGSLGRVLLPEGG 624
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTS-KGNQKNDAVVGEH 589
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V S S+ KG Q E
Sbjct: 625 ITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVGVFSSSALQKKGAQDTPVEPAEK 684
Query: 590 DAKRA-------LLEQQLEGVTDADIDPDRVESR-----------SLFVKNLNFKTCDEN 631
D +E AD +VE +LF+KNLNF T +E
Sbjct: 685 DTAEPETVPDSETMEPAKATEGGADASSSKVEEEEEEEEESLPGCTLFIKNLNFDTTEET 744
Query: 632 LRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGH 690
L+ F K G + S + +K K G +SMGFGF+E+ E A + LQG ++D H
Sbjct: 745 LKGVFS---KVGAVKSCSISRKTNKAGALLSMGFGFVEYRKPEQAQKALKQLQGHVVDSH 801
Query: 691 ALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEA 727
L +++ + K+ + ++++K+LVRN+ F+A
Sbjct: 802 KLEVRISERATKPALTSTRKKQVPRKQTTSKILVRNIPFQA 842
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 90/154 (58%), Gaps = 4/154 (2%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R + F+ G +TD L TKDGK R+F FIGF++E+EA++A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFKQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQQALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK----KEKEVSEDEKNPVLAAKRGEKK 116
FN+S++DT RI+ E + GDP PR WS+++ K K +D P + +K
Sbjct: 62 FNRSFIDTSRITVEFCKSFGDPTKPRAWSKHAQKPSQSKPPPKDKDSVPPEAKKDKKKKS 121
Query: 117 TIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTL 150
+ D + EFL V Q R ++ WAND L
Sbjct: 122 ASKLEKLKKDAEFQEFLSVHQKRTQAATWANDAL 155
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP S + V FL +A
Sbjct: 827 KQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDA 886
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 887 KRAFNALCHSTHLYGRRLVLEWADSEVTLQA 917
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASRA 356
+ ++ VRN+P+ A E+RE FS FG + V + T +G +V + + A RA
Sbjct: 830 TSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKRA 889
Query: 357 IEVLDNSI-FQGRLL 370
L +S GR L
Sbjct: 890 FNALCHSTHLYGRRL 904
>gi|121702823|ref|XP_001269676.1| pre-rRNA processing protein Mrd1, putative [Aspergillus clavatus
NRRL 1]
gi|119397819|gb|EAW08250.1| pre-rRNA processing protein Mrd1, putative [Aspergillus clavatus
NRRL 1]
Length = 822
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 241/786 (30%), Positives = 371/786 (47%), Gaps = 132/786 (16%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP T D+LR+ FS + ++TDA ++ R+ F+GF++ + A++A Y
Sbjct: 4 TRVFVSGLPPTFTNDQLRNHFSSRFQVTDAHVL-----PKRRIGFVGFKSPEVAQQAASY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNK+++ +IS EIAR + P R S D +A K+ +
Sbjct: 59 FNKTFVKMSKISVEIARPIDS----EPVQRVEKHNNNSTSND-----ASAGNALKRKRDG 109
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWAN--DTLIGLM-----ADQKAKVSENISQAIKGGE 173
D QL E++ V++ K+K WAN D + A Q+ +E + +
Sbjct: 110 DNPKQDSQLQEYISVIERPSKTKTWANGEDLFNSVQNSTSTAGQRDDTTEPVEEPSDNQR 169
Query: 174 KSITLHVKSDKSNVIT-----------------DSQATEKSKNAAAD------ELMSDMD 210
K K D+ V+T D A E A A EL+SD D
Sbjct: 170 KK----AKVDEQRVVTRHEEPEPMVVDHTGEDRDEAAAEVQDGAGASQEQEEAELVSDAD 225
Query: 211 YFKSRVKKDWS----DSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIH 266
+ +S+ + D ++E DS ++ E + + D+ D I
Sbjct: 226 WLRSKTSRLLGLLDEDEQAEFDSVS----------HQKAETPSQPLAKSQPDAPRVDDIK 275
Query: 267 SGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVS 326
+ V E+ A+ VD ++ D + S RLFVRNLPY A E +L FSK+G V
Sbjct: 276 ADV-EQPADTPEVD------TNID---NIRISSRLFVRNLPYDAKESDLEPIFSKYGKVE 325
Query: 327 EVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQ 384
E+H+ D + SKG AYV Y ++A +A + LD FQGRLLH++PA KK+ D
Sbjct: 326 EIHVAFDTRSTTSKGFAYVQYFDADAAVQAYKELDGKHFQGRLLHILPATAKKTYKIDDH 385
Query: 385 ELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD 444
EL LK++++ +RK EA+ ++ +WNSL+M D V+ ++A + GVSK+DLLD
Sbjct: 386 ELSKL------PLKKQKQIKRKM-EAASSSFSWNSLYMNADAVMSSVAERLGVSKADLLD 438
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPY 504
+ D V+ A ET VI ETK T GVN+ + ++ +R N LVKN Y
Sbjct: 439 PTSADAGVKQAHAETHVIQETKAYFTANGVNLDAFKQ--------RERGNTAILVKNFSY 490
Query: 505 DSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEW 564
++ K+F +G L ++++P + T+A+V F P EA AFKGLAY++ L+LE
Sbjct: 491 GVKTDDIRKLFEPYGQLTRLLMPPSGTMAIVEFSRPDEAQKAFKGLAYRKLGDSILFLEK 550
Query: 565 APSD-----------VLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRV 613
AP D VL + S+G D E +AD V
Sbjct: 551 APKDLFEATGVPQKPVLETKAVSQGFSTADTFAAE----------------EAD---GPV 591
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDS 671
+ +LFVKNLNF T ++ F +G + + +K K K G+ +SMGFGF++F S
Sbjct: 592 VASTLFVKNLNFSTTNDKFVDLF--RPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFKS 649
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAKKD-------EQVVKKAEKDKSSTKLLVRNVA 724
A + G LD H L+++ + D E KK + TK++++N+
Sbjct: 650 KAQAQAALAAMDGYRLDQHELVVRASNKAMDAAEERRREDTAKKIAARR--TKIIIKNLP 707
Query: 725 FEAQRK 730
F+A +K
Sbjct: 708 FQATKK 713
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V + + GFGF +F S A N
Sbjct: 701 IIIKNLPFQATKKDVRSLFGAY---GQLRSVRVPQKFDRS---ARGFGFADFVSAREAEN 754
Query: 678 VCRDLQGTILDGHALILQLCHAKK--DEQVVKKAEK 711
L+ T L G L+L+ +A+ EQ +++ EK
Sbjct: 755 AMDALKNTHLLGRRLVLEFANAEAIDAEQEIQQIEK 790
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E+ R+FV LP T T D+LR HFS V++ H++ KR I +V + PE A +
Sbjct: 1 MENTRVFVSGLPPTFTNDQLRNHFSSRFQVTDAHVL----PKRR--IGFVGFKSPEVAQQ 54
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQ--ELHNSTS 391
A + + + + V AR S Q E HN+ S
Sbjct: 55 AASYFNKTFVKMSKISVEIARPIDSEPVQRVEKHNNNS 92
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R F F F + +EAE A+
Sbjct: 699 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPQKFDRSARGFGFADFVSAREAENAMDA 758
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ E A
Sbjct: 759 LKNTHLLGRRLVLEFA 774
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R F +G + V V K + ++G + + A A++
Sbjct: 700 KIIIKNLPFQATKKDVRSLFGAYGQLRSVR-VPQKFDRSARGFGFADFVSAREAENAMDA 758
Query: 360 LDNSIFQGRLL 370
L N+ GR L
Sbjct: 759 LKNTHLLGRRL 769
>gi|391867843|gb|EIT77082.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 826
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 236/781 (30%), Positives = 376/781 (48%), Gaps = 117/781 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D+LR F+ + ++TDA ++ R+ F+G +T + A+EA KY
Sbjct: 4 TRVFVSGLPPTFSNDQLRKHFASRFQVTDAHVL-----PKRRIGFVGLKTPEAAKEAAKY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNK+Y+ +IS +IA+ + P S K+ + + L KR + T
Sbjct: 59 FNKTYVKMSKISVDIAKPIDS----EPISAAHKFKKGDKPDSTAENTLKRKRDGEPT--- 111
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLI--GLMADQKAK---------VSENISQAI 169
DP+L E+L +MQ +K WAND + + D AK V + ++ A
Sbjct: 112 ---QQDPKLQEYLSLMQHSSHTKTWANDDAVINSVANDSPAKDPQPVEADEVPQELTYAQ 168
Query: 170 K---------GGEKSITLHVKSDKSNVI------TDSQATEKSKNAAADE---LMSDMDY 211
+ G + ++ H +S+ V T QA ++ A +E +SD D+
Sbjct: 169 RKKAKLGDTSGEDTHVSQHDESEPMVVDATVEGDTTEQAMDQEHPAVHEEEQQPVSDTDW 228
Query: 212 FKSRVKKDWS----DSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHS 267
+S+ + + ++E DSA D E + E D + + + +
Sbjct: 229 LRSKTSRLLGLLDEEEQAEFDSAAQRPTDS-AEPAADAEVDTKNAEADPSPAAADAAEPT 287
Query: 268 GVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSE 327
E D N E + S RLFVRNL Y E +L F+ FG + E
Sbjct: 288 RAPEVDTNIE----------------NIRISARLFVRNLSYDTKESDLEPVFAPFGRIEE 331
Query: 328 VHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQE 385
+H+ D SKG AYV Y ++A A + LD FQGRLLH++PA KK+ D E
Sbjct: 332 IHVAFDTRFSSSKGFAYVQYVESDAAVEAYKALDGKHFQGRLLHILPAAAKKTYKIDDYE 391
Query: 386 LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDR 445
L LK++++ +RK E++ +T +WNSL+M D V+ ++A + G+SK+DLLD
Sbjct: 392 LSKL------PLKKQKQIKRKL-ESTSSTFSWNSLYMNADAVMSSMAERLGISKADLLDP 444
Query: 446 EANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYD 505
++D AV+ A ET VI ETK T GVN+ + +E +R N LVKN Y
Sbjct: 445 TSSDAAVKQAHAETHVIQETKAYFTANGVNIDAFKE--------RERGNTAILVKNFSYG 496
Query: 506 SSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
+L K+F FG L ++++P + T+A+V F P EA AFKGLAY++ L+LE A
Sbjct: 497 VKTDDLRKLFEPFGQLTRLLMPPSGTIAIVEFARPDEAQKAFKGLAYRKLGDSILFLEKA 556
Query: 566 PSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQL--EGVTDADI-----DPDRVESRSL 618
P ++ DA V ++ ++E + +G + AD + + + +L
Sbjct: 557 PKNLF------------DASVA---PQKPIVETKAISQGFSTADTFAAEEPEEAIATATL 601
Query: 619 FVKNLNFKTCDENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETAT 676
FVKNLNF T + + F +G + + +K K K G+ +SMGFGF++F + + A
Sbjct: 602 FVKNLNFDTTNARFVEVF--QPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRTKDQAQ 659
Query: 677 NVCRDLQGTILDGHALILQLCHAKKD-------EQVVKKAEKDKSSTKLLVRNVAFEAQR 729
+ G LD HAL+++ H D E KK + TK++++N+ F+A +
Sbjct: 660 AALAAMNGYKLDQHALVVRSSHKGMDAAEERRREDTAKKIAARR--TKIIIKNLPFQATK 717
Query: 730 K 730
K
Sbjct: 718 K 718
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V K + GFGF +F S A N
Sbjct: 706 IIIKNLPFQATKKDVRSLFGAY---GQLRSVRVPKKFDRS---ARGFGFADFVSAREAEN 759
Query: 678 VCRDLQGTILDGHALILQLCH--AKKDEQVVKKAEK 711
L+ T L G L+L+ + A EQ +++ EK
Sbjct: 760 AMDALKNTHLLGRKLVLEFANEEAIDAEQEIQQIEK 795
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 37/159 (23%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+FV LP T + D+LR+HF+ V++ H++ KR I +V PE+A
Sbjct: 1 MESTRVFVSGLPPTFSNDQLRKHFASRFQVTDAHVL----PKRR--IGFVGLKTPEAAKE 54
Query: 356 AIEVLDNSIFQGRLLHV----------MPARHK-KSSDKQELHNSTSQGTKTLKQRREEE 404
A + + + + + V + A HK K DK + S TLK++R+ E
Sbjct: 55 AAKYFNKTYVKMSKISVDIAKPIDSEPISAAHKFKKGDKPD-----STAENTLKRKRDGE 109
Query: 405 RKASEA-----------SGNTKAWNSLFMRPDTVVENIA 432
+ S +TK W + D V+ ++A
Sbjct: 110 PTQQDPKLQEYLSLMQHSSHTKTWAN----DDAVINSVA 144
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R F F F + +EAE A+
Sbjct: 704 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMDA 763
Query: 61 FNKSYLDTCRISCEIA 76
++L ++ E A
Sbjct: 764 LKNTHLLGRKLVLEFA 779
>gi|169771029|ref|XP_001819984.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
oryzae RIB40]
gi|83767843|dbj|BAE57982.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 825
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 235/781 (30%), Positives = 377/781 (48%), Gaps = 118/781 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D+LR F+ + ++TDA ++ R+ F+G +T + A+EA KY
Sbjct: 4 TRVFVSGLPPTFSNDQLRKHFASRFQVTDAHVL-----PKRRIGFVGLKTPEAAKEAAKY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNK+Y+ +IS +IA+ + P S K+ + + +N + + GE
Sbjct: 59 FNKTYVKMSKISVDIAKPIDS----EPISAAHKFKKGDKPDSAENTLKRKRDGEPT---- 110
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLI--GLMADQKAK---------VSENISQAI 169
DP+L E+L +MQ +K WAND + + D AK V + ++ A
Sbjct: 111 ---QQDPKLQEYLSLMQHSSHTKTWANDDAVINSVANDSPAKDPQPVEADEVPQELTYAQ 167
Query: 170 K---------GGEKSITLHVKSDKSNVI------TDSQATEKSKNAAADE---LMSDMDY 211
+ G + ++ H +S+ V T QA ++ A +E +SD D+
Sbjct: 168 RKKAKLGDTSGEDTHVSQHDESEPMVVDATVEGDTTEQAMDQEHPAVHEEEQQPVSDTDW 227
Query: 212 FKSRVKKDWS----DSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHS 267
+S+ + + ++E DSA D E + E D + + + +
Sbjct: 228 LRSKTSRLLGLLDEEEQAEFDSAAQRPTDS-AEPAADAEVDTKNAEADPSPAAADAAEPT 286
Query: 268 GVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSE 327
E D N E + S RLFVRNL Y E +L F+ FG + E
Sbjct: 287 RAPEVDTNIE----------------NIRISARLFVRNLSYDTKESDLEPVFAPFGRIEE 330
Query: 328 VHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQE 385
+H+ D SKG AYV Y ++A A + LD FQGRLLH++PA KK+ D E
Sbjct: 331 IHVAFDTRFSSSKGFAYVQYVESDAAVEAYKALDGKHFQGRLLHILPAAAKKTYKIDDYE 390
Query: 386 LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDR 445
L LK++++ +RK E++ +T +WNSL+M D V+ ++A + G+SK+DLLD
Sbjct: 391 LSKL------PLKKQKQIKRKL-ESTSSTFSWNSLYMNADAVMSSMAERLGISKADLLDP 443
Query: 446 EANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYD 505
++D AV+ A ET VI ETK T GVN+ + +E +R N LVKN Y
Sbjct: 444 TSSDAAVKQAHAETHVIQETKAYFTANGVNIDAFKE--------RERGNTAILVKNFSYG 495
Query: 506 SSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
+L K+F FG L ++++P + T+A+V F P EA AFKGLAY++ L+LE A
Sbjct: 496 VKTDDLRKLFEPFGQLTRLLMPPSGTIAIVEFARPDEAQKAFKGLAYRKLGDSILFLEKA 555
Query: 566 PSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQL--EGVTDADI-----DPDRVESRSL 618
P ++ DA V ++ ++E + +G + AD + + + +L
Sbjct: 556 PKNLF------------DASVA---PQKPIVETKAISQGFSTADTFAAEEPEEAIATATL 600
Query: 619 FVKNLNFKTCDENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETAT 676
FVKNLNF T + + F +G + + +K K K G+ +SMGFGF++F + + A
Sbjct: 601 FVKNLNFDTTNARFVEVF--QPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRTKDQAQ 658
Query: 677 NVCRDLQGTILDGHALILQLCHAKKD-------EQVVKKAEKDKSSTKLLVRNVAFEAQR 729
+ G LD HAL+++ H D E KK + TK++++N+ F+A +
Sbjct: 659 AALAAMNGYKLDQHALVVRSSHKGMDAAEERRREDTAKKIAARR--TKIIIKNLPFQATK 716
Query: 730 K 730
K
Sbjct: 717 K 717
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V K + GFGF +F S A N
Sbjct: 705 IIIKNLPFQATKKDVRSLFGAY---GQLRSVRVPKKFDRS---ARGFGFADFVSAREAEN 758
Query: 678 VCRDLQGTILDGHALILQLCH--AKKDEQVVKKAEK 711
L+ T L G L+L+ + A EQ +++ EK
Sbjct: 759 AMDALKNTHLLGRKLVLEFANEEAIDAEQEIQQIEK 794
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R F F F + +EAE A+
Sbjct: 703 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMDA 762
Query: 61 FNKSYLDTCRISCEIA 76
++L ++ E A
Sbjct: 763 LKNTHLLGRKLVLEFA 778
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+FV LP T + D+LR+HF+ V++ H++ KR I +V PE+A
Sbjct: 1 MESTRVFVSGLPPTFSNDQLRKHFASRFQVTDAHVL----PKRR--IGFVGLKTPEAAKE 54
Query: 356 AIEVLDNS 363
A + + +
Sbjct: 55 AAKYFNKT 62
>gi|440906208|gb|ELR56498.1| Putative RNA-binding protein 19 [Bos grunniens mutus]
Length = 947
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/451 (37%), Positives = 262/451 (58%), Gaps = 33/451 (7%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLFVRNLPYT++E++L + FS++G VSE+H +D TK+ KG A+V + PE
Sbjct: 398 EEDLADSGRLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFVTFMFPE 457
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A +D +FQGR+LHV+P+ KK + + + ++ ++++E K S
Sbjct: 458 HAVKAYAEVDGQVFQGRMLHVLPSTIKKEASED------ANAPESSSYKKKKESKDKANS 511
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALT 470
++ WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++ L
Sbjct: 512 SSSHNWNTLFMGPNAVADAIAQKYSATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLL 571
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV + S + +A +RS V LVKNLP + EL + F +FGSL +V+LP
Sbjct: 572 DNGVCLDSFSQAAA------ERSKTVILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGG 625
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHD 590
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V S S + + DA
Sbjct: 626 ITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPMGVFS-SPIPQKEEPQDAPAEPAG 684
Query: 591 AKRALLEQQLEGVTDADIDPDR---------VESRSLFVKNLNFKTCDENLRKHFGEHIK 641
R +E + +G T P + +LF+KNLNF T +E L+ F K
Sbjct: 685 TDR--MEPETDGETPEGEQPTEEEEEEEEESLPGCTLFIKNLNFDTTEETLKGVFS---K 739
Query: 642 EGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
G + S + KK K G +SMGFGF+E+ E A + LQG ++DGH L +++
Sbjct: 740 VGAVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISERA 799
Query: 701 KDEQVV----KKAEKDKSSTKLLVRNVAFEA 727
+ K+A + ++++K+LVRN+ F+A
Sbjct: 800 TKPALTSARKKQAPRKQTTSKILVRNIPFQA 830
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 116/221 (52%), Gaps = 6/221 (2%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQTALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNKS++DT RI+ E + GDP PR WS+++ K + + ++ + + +K
Sbjct: 62 FNKSFIDTSRITVEFCKAFGDPTKPRAWSKHAQKSSQSKPPPKDKDAISTEPKKDDKKKK 121
Query: 121 VTE-----NDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
V DD + EFL V Q R + WAND L + K+K + N
Sbjct: 122 VAGELEKLKDDNEFQEFLSVHQKRTQVATWANDALDAEPSKGKSKPA-NDYLNFDSDSGQ 180
Query: 176 ITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRV 216
+ + +++ + K AA + +SDMDY KS+V
Sbjct: 181 ESEEEEDGENSEEEEDGLKPKEPKAAVQKELSDMDYLKSKV 221
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 125/316 (39%), Gaps = 53/316 (16%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP EL+E FS+FG++ V + T A V + P A +A L
Sbjct: 592 ILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGGIT------AIVEFLEPLEARKAFRHL 645
Query: 361 DNSIFQGRLLHV----MPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA 416
S F L++ M K+E ++ ++ T + E + + E T+
Sbjct: 646 AYSKFHHVPLYLEWAPMGVFSSPIPQKEEPQDAPAEPAGTDRMEPETDGETPEGEQPTEE 705
Query: 417 WN----------SLFMR------PDTVVENIARKHGVSKSDLLDREANDLAVRIALG--- 457
+LF++ + ++ + K G KS + ++ N +++G
Sbjct: 706 EEEEEEESLPGCTLFIKNLNFDTTEETLKGVFSKVGAVKSCSISKKKNKAGALLSMGFGF 765
Query: 458 -ETQVIAETKKALTNAGVNVSSLEEF--------------SAGKTDGL-KRSNHVFLVKN 501
E + + +KAL +V + SA K K++ LV+N
Sbjct: 766 VEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPALTSARKKQAPRKQTTSKILVRN 825
Query: 502 LPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEAAAAFKGLAYKR 554
+P+ + E+ ++F FG L V LP T V FL +A AF L +
Sbjct: 826 IPFQADSREIRELFSTFGELKTVRLPKKLTGTGTHRGFGFVDFLTKQDAKRAFNALCHST 885
Query: 555 Y-KGVPLYLEWAPSDV 569
+ G L LEWA S+V
Sbjct: 886 HLYGRRLVLEWADSEV 901
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 271 EEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHI 330
E + +GE + P+ ++ ++E L LF++NL + TE+ L+ FSK G V I
Sbjct: 689 EPETDGETPEGEQPTEEEEEEEEESLPGCTLFIKNLNFDTTEETLKGVFSKVGAVKSCSI 748
Query: 331 VVDKDTK---RSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
K+ S G +V Y PE A +A++ L + G L V
Sbjct: 749 SKKKNKAGALLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEV 793
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 819 SKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGTHRGFGFVDFLTKQDAKRAF 878
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 879 NALCHSTHLYGRRLVLEWA 897
>gi|238486470|ref|XP_002374473.1| pre-rRNA processing protein Mrd1, putative [Aspergillus flavus
NRRL3357]
gi|220699352|gb|EED55691.1| pre-rRNA processing protein Mrd1, putative [Aspergillus flavus
NRRL3357]
Length = 826
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 236/781 (30%), Positives = 376/781 (48%), Gaps = 117/781 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D+LR F+ + ++TDA ++ R+ F+G +T + A+EA KY
Sbjct: 4 TRVFVSGLPPTFSNDQLRKHFASRFQVTDAHVL-----PKRRIGFVGLKTPEAAKEAAKY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNK+Y+ +IS +IA+ + P S K+ + + L KR + T
Sbjct: 59 FNKTYVKMSKISVDIAKPIDS----EPISAAHKFKKGDKPDSTAENTLKRKRDGEPT--- 111
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLI--GLMADQKAK---------VSENISQAI 169
DP+L E+L +MQ +K WAND + + D AK V + ++ A
Sbjct: 112 ---QQDPKLQEYLSLMQHSSHTKTWANDDAVINSVANDSPAKDPQPVEADEVPQELTYAQ 168
Query: 170 K---------GGEKSITLHVKSDKSNVI------TDSQATEKSKNAAADE---LMSDMDY 211
+ G + ++ H +S+ V T QA ++ A +E +SD D+
Sbjct: 169 RKKAKLGDTSGEDTHVSQHDESEPMVVDATVEGDTTEQAMDQEHPAVHEEEQQPVSDTDW 228
Query: 212 FKSRVKKDWS----DSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHS 267
+S+ + + ++E DSA D E + E D + + + +
Sbjct: 229 LRSKTSRLLGLLDEEEQAEFDSAAQRPTDS-AEPAADAEVDTKNAEADPSPAAADAAEPT 287
Query: 268 GVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSE 327
E D N E + S RLFVRNL Y E +L F+ FG + E
Sbjct: 288 RAPEVDTNIE----------------NIRISARLFVRNLSYDTKESDLEPVFAPFGRIEE 331
Query: 328 VHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQE 385
+H+ D SKG AYV Y ++A A + LD FQGRLLH++PA KK+ D E
Sbjct: 332 IHVAFDTRFSSSKGFAYVQYVESDAAVEAYKALDGKHFQGRLLHILPAAAKKTYKIDDYE 391
Query: 386 LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDR 445
L LK++++ +RK E++ +T +WNSL+M D V+ ++A + G+SK+DLLD
Sbjct: 392 LSKL------PLKKQKQIKRKL-ESTSSTFSWNSLYMNADAVMSSMAERLGISKADLLDP 444
Query: 446 EANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYD 505
++D AV+ A ET VI ETK T GVN+ + +E +R N LVKN Y
Sbjct: 445 TSSDAAVKQAHAETHVIQETKAYFTANGVNIDAFKE--------RERGNTAILVKNFSYG 496
Query: 506 SSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
+L K+F FG L ++++P + T+A+V F P EA AFKGLAY++ L+LE A
Sbjct: 497 VKTDDLRKLFEPFGQLTRLLMPPSGTIAIVEFARPDEAQKAFKGLAYRKLGDSILFLEKA 556
Query: 566 PSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQL--EGVTDADI-----DPDRVESRSL 618
P ++ DA V ++ ++E + +G + AD + + + +L
Sbjct: 557 PKNLF------------DASVA---PQKPIVETKAISQGFSTADTFAAEEPEEAIATATL 601
Query: 619 FVKNLNFKTCDENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETAT 676
FVKNLNF T + + F +G + + +K K K G+ +SMGFGF++F + + A
Sbjct: 602 FVKNLNFDTTNARFVEVF--QPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRTKDQAQ 659
Query: 677 NVCRDLQGTILDGHALILQLCHAKKD-------EQVVKKAEKDKSSTKLLVRNVAFEAQR 729
+ G LD HAL+++ H D E KK + TK++++N+ F+A +
Sbjct: 660 AALAAMNGYKLDQHALVVRSSHKGMDAAEERRREDTAKKIAARR--TKIIIKNLPFQATK 717
Query: 730 K 730
K
Sbjct: 718 K 718
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V K + GFGF +F S A N
Sbjct: 706 IIIKNLPFQATKKDVRSLFGAY---GQLRSVRVPKKFDRS---ARGFGFADFVSAREAEN 759
Query: 678 VCRDLQGTILDGHALILQLCH--AKKDEQVVKKAEK 711
L+ T L G L+L+ + A EQ +++ EK
Sbjct: 760 AMDALKNTHLLGRKLVLEFANEEAIDAEQEIQQIEK 795
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 37/159 (23%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+FV LP T + D+LR+HF+ V++ H++ KR I +V PE+A
Sbjct: 1 MESTRVFVSGLPPTFSNDQLRKHFASRFQVTDAHVL----PKRR--IGFVGLKTPEAAKE 54
Query: 356 AIEVLDNSIFQGRLLHV----------MPARHK-KSSDKQELHNSTSQGTKTLKQRREEE 404
A + + + + + V + A HK K DK + S TLK++R+ E
Sbjct: 55 AAKYFNKTYVKMSKISVDIAKPIDSEPISAAHKFKKGDKPD-----STAENTLKRKRDGE 109
Query: 405 RKASEA-----------SGNTKAWNSLFMRPDTVVENIA 432
+ S +TK W + D V+ ++A
Sbjct: 110 PTQQDPKLQEYLSLMQHSSHTKTWAN----DDAVINSVA 144
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R F F F + +EAE A+
Sbjct: 704 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMDA 763
Query: 61 FNKSYLDTCRISCEIA 76
++L ++ E A
Sbjct: 764 LKNTHLLGRKLVLEFA 779
>gi|431914230|gb|ELK15488.1| Putative RNA-binding protein 19 [Pteropus alecto]
Length = 949
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/486 (36%), Positives = 277/486 (56%), Gaps = 53/486 (10%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +S+K Q L +SGRLFVRNLPYT++E++L + FS++G +SE+H
Sbjct: 379 GPPKNSTKAWQGRTLGENEEEEDLADSGRLFVRNLPYTSSEEDLEKIFSRYGPLSELHYP 438
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A+V + PE A +A +D +FQGR+LHV+P+ KK + + ++ +
Sbjct: 439 IDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIKKGASE----DADA 494
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ +S + WN+LFM P+ V + IA K+ +KS + D E +
Sbjct: 495 PGSSSYKKKKESKDKANSSSPHN--WNTLFMGPNAVADAIAEKYSATKSQVFDHETKGSV 552
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 553 AVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAA------ERSKTVMLVKNLPAGTLAAE 606
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L ++FG+FGSL +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 607 LQEIFGQFGSLGRVLLPEGGVTAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPMGVF 666
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR------------------ 612
S S+ + ++ + E A++ E L+G T P
Sbjct: 667 SSSAPAPQKEEPQYALVE-AAEKVEPETVLDGETPEGEKPTEGAAEDSSAKMEEEEEDEE 725
Query: 613 ---VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIE 668
+ +LF+KNLNF T +E L+ F K G + S + +K K G +SMGFGF+E
Sbjct: 726 EEGLPGCTLFIKNLNFDTTEETLKGVFS---KVGVVKSCSISRKKNKAGVMLSMGFGFVE 782
Query: 669 FDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVA 724
+ E A + LQG ++D H L +++ + K+ + ++++K+LVRN+
Sbjct: 783 YRKPEQAQKALKQLQGHVVDSHKLEVRISERATKPALTSTRKKQVARKQTTSKILVRNIP 842
Query: 725 FEAQRK 730
F+A R+
Sbjct: 843 FQADRR 848
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 218/457 (47%), Gaps = 49/457 (10%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F G +TD L TKDGK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFGAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQRALGH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
+KS++DT RI+ E + GDP PR WSR++ K + K+ S+++ + K+ ++K
Sbjct: 62 LHKSFVDTSRITVEFCKSFGDPTKPRAWSRHAQKPSQSKQPSKNKDSVPRETKKEDRKKK 121
Query: 118 ----IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
+EK+ E D EFL V Q R + WAND L A K+K +++
Sbjct: 122 VAGELEKLKE--DTAFQEFLSVHQKRTQVATWANDALDAEPAKGKSKPADDY-------- 171
Query: 174 KSITLHVKSDKSNVITDSQATEKSK-------NAAADELMSDMDYFKSRVKKDWSDSESE 226
L+ SD + A E + AA + +SDMDY KS+V + S S E
Sbjct: 172 ----LNFDSDSGQESEEEDAGEGPEEEDDLEPKAAVRKELSDMDYLKSKVVRAESPSSEE 227
Query: 227 DDSAGDDD---DDDDGEEEEEEENDHNGDSNEECDSIIK-DSIHSGVGEED--ANGEIVD 280
++ +D + D+G EEE++ C S + D SG G E +G+
Sbjct: 228 EEDEESEDEAVNCDEGSAAEEEDS---------CASPARQDGAGSGPGPEQRTPSGDKKP 278
Query: 281 PGNPSSSSKD-VQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS 339
+ + K +Q+E + +R P+ TE + E + V+ + IV + ++
Sbjct: 279 QETRAETEKPAIQKEPSTPHTVKLRGAPFNVTEKNVVEFLAPLKPVA-IRIVRNAHGNKT 337
Query: 340 KGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQ 399
G +V ++ E +A++ + GR + V ++ ++ +++ + +TL +
Sbjct: 338 -GYIFVDFSSEEEVKKALKC-NRDYMGGRYIEVFREKNVPTTKGPPKNSTKAWQGRTLGE 395
Query: 400 RREEERKASEASGNTKAWNSLFMRPDTVVENIARKHG 436
EEE A SG N + + +E I ++G
Sbjct: 396 NEEEEDLAD--SGRLFVRNLPYTSSEEDLEKIFSRYG 430
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 128/334 (38%), Gaps = 67/334 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP EL+E F +FG++ V + T A V + P A +A L
Sbjct: 593 MLVKNLPAGTLAAELQEIFGQFGSLGRVLLPEGGVT------AIVEFLEPLEARKAFRHL 646
Query: 361 DNSIFQGRLLHV-----------MPARHKK--------SSDKQE----LHNSTSQGTKTL 397
S F L++ PA K+ +++K E L T +G K
Sbjct: 647 AYSKFHHVPLYLEWAPMGVFSSSAPAPQKEEPQYALVEAAEKVEPETVLDGETPEGEKPT 706
Query: 398 KQRREEERKASEASGNTKAWNSL-----------FMRPDTVVENIARKHGVSKSDLLDRE 446
+ E+ E + L F + ++ + K GV KS + R+
Sbjct: 707 EGAAEDSSAKMEEEEEDEEEEGLPGCTLFIKNLNFDTTEETLKGVFSKVGVVKSCSISRK 766
Query: 447 ANDLAVRIALG----ETQVIAETKKALTNAGVNVSSLEEF---------------SAGKT 487
N V +++G E + + +KAL +V + + K
Sbjct: 767 KNKAGVMLSMGFGFVEYRKPEQAQKALKQLQGHVVDSHKLEVRISERATKPALTSTRKKQ 826
Query: 488 DGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEP 540
K++ LV+N+P+ + E+ ++F FG L V LP + + V FL
Sbjct: 827 VARKQTTSKILVRNIPFQADRREIRELFSTFGELKTVRLPKKMAGTGTHRGFGFVDFLSK 886
Query: 541 VEAAAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
+A AF L + + G L LEWA S+V Q+
Sbjct: 887 QDAKRAFNALCHSTHLYGRRLVLEWADSEVSLQA 920
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASRA 356
+ ++ VRN+P+ A E+RE FS FG + V + T +G +V + + A RA
Sbjct: 833 TSKILVRNIPFQADRREIRELFSTFGELKTVRLPKKMAGTGTHRGFGFVDFLSKQDAKRA 892
Query: 357 IEVLDNSI-FQGRLL 370
L +S GR L
Sbjct: 893 FNALCHSTHLYGRRL 907
>gi|148228969|ref|NP_001088073.1| RNA binding motif protein 19 [Xenopus laevis]
gi|52354760|gb|AAH82875.1| LOC494769 protein [Xenopus laevis]
Length = 920
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 181/450 (40%), Positives = 264/450 (58%), Gaps = 27/450 (6%)
Query: 289 KDVQQEVL-ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
+++QQE L ESGRLFVRNLPY+ TED+L + FSK+G +SE+H +D TK+ KG A+V +
Sbjct: 375 QELQQEDLSESGRLFVRNLPYSCTEDDLDKLFSKYGPISEIHFPIDSLTKKPKGFAFVTF 434
Query: 348 AIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKA 407
I E A +A +D IFQGRLLHV+P+ K K+E++ S + KQ+ +++
Sbjct: 435 LITEHAVKAYAEVDGQIFQGRLLHVLPSAAK----KEEVNESEGDASGYKKQKALKDKAV 490
Query: 408 SEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETK 466
S +S N WN+LFM +V + IA+K+ SKS +LD LAVR+ALGETQ++ + +
Sbjct: 491 SSSSHN---WNTLFMGTSSVADVIAQKYNTSKSQVLDDGGKGSLAVRVALGETQLVQDVR 547
Query: 467 KALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVIL 526
+ L GV++ S + +AG RS V LVKNLP + EL ++FG+FG L +V+L
Sbjct: 548 RFLIENGVSLDSFSQ-AAG-----PRSKTVILVKNLPAGTKPAELQELFGRFGDLGRVLL 601
Query: 527 PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS----QSSTSKGNQKN 582
P A++ FLEP EA AF LAY ++ VPLYLEWAP DV + Q + Q+
Sbjct: 602 PEGGISAVMEFLEPTEAKRAFYKLAYTKFHHVPLYLEWAPMDVFTCPPPQKKVEQTEQET 661
Query: 583 DAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKE 642
A ++LE + + + + +LF+KNLNF T +E L++ F K
Sbjct: 662 SEEQEADAAGTKQEVKELEVEEQEEDEEETLPGCTLFIKNLNFSTSEETLKEVFS---KV 718
Query: 643 GRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL----C 697
G + S + KK K+G +SMGFGF+E+ E A R LQ ++DGH + ++L
Sbjct: 719 GTVKSCSISKKKDKSGSLLSMGFGFVEYMKPEQAQKALRRLQQCMVDGHQVEIKLSERAI 778
Query: 698 HAKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
A + K+ K + S+K+LVRNV F+A
Sbjct: 779 RAATSMERKKQISKKQQSSKILVRNVPFQA 808
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 131/227 (57%), Gaps = 17/227 (7%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + EDR R+ F+ G +TD L TKDGK R+F FIGF +E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGIKEDRFRELFAAFGTLTDCSLKYTKDGKFRKFGFIGFVSEEEAKAALGH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS---LKKEKEVSEDEKNPVLAAKRGEKK- 116
FNKSY+DT R+S E+ + GDP P+ WS++S K ++ + ++ P +A K
Sbjct: 62 FNKSYIDTSRVSVELCKSFGDPEKPKAWSKHSQKNDKDSEKKKDSKQTPTDSANSRSTKN 121
Query: 117 ---TIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSEN-ISQAIKGG 172
+E++ + DD EFL V Q R K+ W NDT + + QK++ ++ ++ +
Sbjct: 122 NTTALEELEKEDD--FKEFLSVHQNRTKTSTWDNDTHVVVEKKQKSQTQDDYLNFDSESE 179
Query: 173 EKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKD 219
E + V++D N ++ + KS+ +SDM+Y KS+V +D
Sbjct: 180 EDNSENEVENDDRNSVSTGKLALKSE-------ISDMEYLKSKVVRD 219
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASR 355
+S ++ VRN+P+ AT E+RE FS FG + V + T +G +V + + A R
Sbjct: 795 QSSKILVRNVPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFVTKQDAKR 854
Query: 356 AIEVLDNSI-FQGRLL 370
A L +S GR L
Sbjct: 855 AFSALCHSTHLYGRRL 870
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPVEA 543
K+ + LV+N+P+ ++ E+ ++F FG L V LP S + V F+ +A
Sbjct: 793 KQQSSKILVRNVPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFVTKQDA 852
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSD 568
AF L + + G L LEWA ++
Sbjct: 853 KRAFSALCHSTHLYGRRLVLEWAETE 878
>gi|354466972|ref|XP_003495945.1| PREDICTED: probable RNA-binding protein 19 [Cricetulus griseus]
gi|344237019|gb|EGV93122.1| putative RNA-binding protein 19 [Cricetulus griseus]
Length = 954
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 176/485 (36%), Positives = 269/485 (55%), Gaps = 51/485 (10%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P SS+ Q L +SGRLFVRNL YT++E++L + FS +G +SE+H
Sbjct: 373 GPPKSSTTPWQGRTLGEHEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYP 432
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A++ + PE A +A +D +FQGR+LHV+P+ KK + + +S +
Sbjct: 433 IDSLTKKPKGFAFITFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIKKEASQ----DSDT 488
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E KA+ +S + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 489 SGS-SYKKKKEAMDKANSSSSHN--WNTLFMGPNAVADAIAQKYSATKSQVFDHETKGSV 545
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E + L + GV++ S + +A +RS V L KNLP + E
Sbjct: 546 AVRVALGETQLVQEVRSFLIDNGVSLDSFSQAAA------ERSKTVILAKNLPAGTLAAE 599
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L ++FG+FGSL +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 600 LQEIFGRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGVF 659
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPD------------------R 612
K +Q +L+ + E + +
Sbjct: 660 GTVPQKKDSQPAQTAEKAKAEPEMVLDPEGEKTSGEGAEAPTGKVEEEEEEEEEDEEEES 719
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDS 671
V +LF+KNLNF T +E L++ F K G + S V KK K G +SMGFGF+E+
Sbjct: 720 VPGCTLFIKNLNFSTTEETLKEVFS---KVGAVKSCTVSKKKSKAGVLLSMGFGFVEYKK 776
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEA 727
E A + LQG ++DGH L +++ + K+ K ++++K+LVRN+ F+A
Sbjct: 777 PEKAQKALKQLQGHVVDGHKLEVRISERATKPSLTPTRKKQVSKKQTTSKILVRNIPFQA 836
Query: 728 -QRKI 731
QR+I
Sbjct: 837 NQREI 841
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 122/236 (51%), Gaps = 40/236 (16%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQAALSH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKTI 118
FN+S++DT RI+ E + GDP PR WS+++ K K K+ S+D +P K +KK +
Sbjct: 62 FNRSFIDTSRITVEFCKSFGDPTKPRAWSKHAQKPSKPKQPSQDS-SPSDTKKDDKKKKV 120
Query: 119 EKVTE--NDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSI 176
E D + EFL + Q R + WAND L + K K S
Sbjct: 121 SSDLEKLKKDAEFQEFLSIHQKRTQVATWANDALDAELPRAKTKPS-------------- 166
Query: 177 TLHVKSDKSNVITDSQATEKSK----------------NAAADELMSDMDYFKSRV 216
SD N +DS + ++S+ AA + +SDMDY KS++
Sbjct: 167 -----SDYLNFDSDSDSGQESEKELAGEEPEEEQGLQLKAATQKELSDMDYLKSKM 217
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ +++ E+ ++F FG L V LP T V F+ +A
Sbjct: 821 KQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFVTKQDA 880
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 881 KKAFNALCHSTHLYGRRLVLEWADSEVTLQA 911
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P + +R+ FS GE+ +L + T G R F F+ F T+Q+A++A
Sbjct: 825 SKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFVTKQDAKKAF 884
>gi|167382576|ref|XP_001736171.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901525|gb|EDR27604.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 697
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 289/528 (54%), Gaps = 71/528 (13%)
Query: 236 DDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEV 295
DD +++ + E+D N EE + +I + H S ++ +
Sbjct: 141 DDGKKKKTDSEDDQNNQQMEEDEEMINEQEHQ------------------KSMDEIDVKD 182
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
E GR+++ NLP+ TED++R+ F +FGN++E+H+ +DK TK+SKG +VL+ +P+ A +
Sbjct: 183 WEEGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVK 242
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
A +DN +GR++HV A+ S +Q + +K K++++ E KA +GN
Sbjct: 243 ACNEMDNKFIKGRIVHVTYAKADPYSSQQ------TGESKNYKEKKQNELKAK--AGNQF 294
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVN 475
W++L+MR DT V +A + G+ K ++LD A +AVR+AL E VI +TKK L GVN
Sbjct: 295 NWSTLYMRQDTAVSAVAEELGMKKEEILDVNAESMAVRVALAENYVINQTKKWLEENGVN 354
Query: 476 VSSLEEFSAGKTDGL--KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
+ LE +G+ KRSN++ +VKN+ + + E+ +F KFG+L + ++P +K LA
Sbjct: 355 CAVLE-------NGMKEKRSNNIIIVKNIAASAIDLEVKSLFEKFGTLKQFLMPKSKALA 407
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKR 593
LV F +A AFK L Y RY+G+PLYLEWAP V + +K + + + E +K
Sbjct: 408 LVEFEIANDAKTAFKRLVYSRYRGIPLYLEWAPEKVFDEEKLNK-KMEEEKLTQEQQSKT 466
Query: 594 ALL--------------------------EQQLEGVTDADIDPDRVE--SRSLFVKNLNF 625
+++ + +T D P+ VE S++L++KNL+F
Sbjct: 467 KQKEDDQKKKEDKTKQKEDKKKQEEGKTKQEEDKAITKTD-QPELVEEGSKTLYIKNLSF 525
Query: 626 KTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGT 685
KT ++ +RK F K GR+L+V + K + GFGF+E+ E A N + LQG
Sbjct: 526 KTKEDVIRKVFE---KCGRVLAVTLSKTKDKKVEKNSGFGFVEYARHEDAINAIKTLQGK 582
Query: 686 ILDGHALILQLCHAK---KDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
++DGHA+ +++ K +D + K+ E+ K S KLLV+NV FE K
Sbjct: 583 VIDGHAVQIEISQPKVKDEDHKERKEIEEHKVSNKLLVKNVPFETNIK 630
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI +KNLP+ E L+ F + G ITD K+MRT G SR+F FIGF E +A+ AI
Sbjct: 2 SRIIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQGVSRKFGFIGFENEDQAQTAITK 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
N +Y+ + ++ +A+ +GD + RPWS+YS+ S D+K ++ K E TI+K
Sbjct: 62 MNGAYIQSSKLQVSLAKAIGDQTIERPWSKYSV-GSSSFSNDKKRKIIPTKH-ETPTIKK 119
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 128/299 (42%), Gaps = 40/299 (13%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ ++NLP A E L++ F KFG +++ V+ S+ ++ + + A AI
Sbjct: 3 RIIIKNLPERADEKILKQQFEKFGGITDCK-VMRTPQGVSRKFGFIGFENEDQAQTAITK 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNS 419
++ + Q L V A+ + G +T+++ + S + N K
Sbjct: 62 MNGAYIQSSKLQVSLAK--------------AIGDQTIERPWSKYSVGSSSFSNDKKRKI 107
Query: 420 LFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI----------AETKKAL 469
+ + +T I +K S D L + AN+ ++ G+ + E + +
Sbjct: 108 IPTKHET--PTIKKKKVSSSLDELKKIANERRPKLDDGKKKKTDSEDDQNNQQMEEDEEM 165
Query: 470 TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-- 527
N + S++E + +++ NLP++ +E ++ K F +FG++ ++ LP
Sbjct: 166 INEQEHQKSMDEIDVKDWE----EGRIYIT-NLPFNCTEDDIRKEFDRFGNIAEIHLPID 220
Query: 528 ----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN 582
+K V+F+ P +A A + K KG +++ +A +D S T G KN
Sbjct: 221 KITKKSKGFGFVLFVVPQDAVKACNEMDNKFIKGRIVHVTYAKADPYSSQQT--GESKN 277
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L V+N+P+ E+RE F +G + V + D ++KG A+V YA + A+ A+
Sbjct: 615 SNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKVDG-QNKGFAFVEYATKQEAANAM 673
Query: 358 EVLDNSIFQGRLLHVMPAR 376
L NS F GR L + A+
Sbjct: 674 AALKNSHFYGRHLIIEYAK 692
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 39/207 (18%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYK 556
+KNL + + E + K+F K G + V L TK + VE + F + Y R++
Sbjct: 518 LYIKNLSFKTKEDVIRKVFEKCGRVLAVTLSKTKD-------KKVEKNSGFGFVEYARHE 570
Query: 557 GVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDAD------IDP 610
D ++ T +G V+ H + +E V D D I+
Sbjct: 571 -----------DAINAIKTLQGK-----VIDGHAVQ---IEISQPKVKDEDHKERKEIEE 611
Query: 611 DRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFD 670
+V S L VKN+ F+T + +R+ F + G + V++ K + +G+N GF F+E+
Sbjct: 612 HKV-SNKLLVKNVPFETNIKEVRELFRTY---GTLRGVRLPKKV-DGQN--KGFAFVEYA 664
Query: 671 SVETATNVCRDLQGTILDGHALILQLC 697
+ + A N L+ + G LI++
Sbjct: 665 TKQEAANAMAALKNSHFYGRHLIIEYA 691
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P +R+ F G + +L + DG+++ FAF+ + T+QEA A+
Sbjct: 616 NKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKVDGQNKGFAFVEYATKQEAANAMAA 675
Query: 61 FNKSYLDTCRISCEIAR 77
S+ + E A+
Sbjct: 676 LKNSHFYGRHLIIEYAK 692
>gi|67516279|ref|XP_658025.1| hypothetical protein AN0421.2 [Aspergillus nidulans FGSC A4]
gi|74681510|sp|Q5BGA9.1|MRD1_EMENI RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|40747364|gb|EAA66520.1| hypothetical protein AN0421.2 [Aspergillus nidulans FGSC A4]
gi|259489335|tpe|CBF89520.1| TPA: Multiple RNA-binding domain-containing protein 1
[Source:UniProtKB/Swiss-Prot;Acc:Q5BGA9] [Aspergillus
nidulans FGSC A4]
Length = 819
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 237/790 (30%), Positives = 372/790 (47%), Gaps = 142/790 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP +T D+L+ F + +TDA ++ R+ F+GF++ + A++A+ Y
Sbjct: 4 TRVFVSGLPPTLTNDQLKKHFETRFHVTDAHVL-----PKRRIGFVGFKSSEAAQQAVSY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNK+Y+ +IS +IA+ + R SR + +D L KR + TI+
Sbjct: 59 FNKTYMRMSKISVDIAKPIDAEPAHRKDSRTA------QPDDALGNNLKRKR-DGDTIK- 110
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLHV 180
D + E+L ++Q K++ WAND DQ E
Sbjct: 111 -----DSKTQEYLSLLQQPSKTRTWAND-------DQLPDPDE----------------- 141
Query: 181 KSDKSNVITDSQATEKSKNAAAD--ELMSDMDYFKSRVKKDWSDSESEDDSAG--DDDDD 236
TDS A E+ + D E ++ K+++ +D ++S AG D+
Sbjct: 142 --------TDSHAQEQEQPFDVDDQEELTYAQRKKAKLGQDANESSHVPVVAGYQPTTDE 193
Query: 237 DDG----EEEEEEENDHNGDSNEECDS---IIKDSIHSGVGEEDANGEIVDPG---NPS- 285
DG E+ EEE D D DS K S G+ +ED P NP+
Sbjct: 194 SDGQPSPEKHEEELEDPQKDQAPVSDSDWLRSKTSRLLGLLDEDEQETFASPAAATNPTP 253
Query: 286 ------------SSSKDVQQEVLE----------------SGRLFVRNLPYTATEDELRE 317
S K + ++ + S RLFVRNL Y E EL
Sbjct: 254 IINSNVEKPEAESPEKPAESDLTKAPTAAEVDTNIENIRISARLFVRNLSYETKESELEP 313
Query: 318 HFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARH 377
FS FG + E+H+ D SKG AYV YA P++A A LD IFQGRLLH++PA
Sbjct: 314 VFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEAYRNLDGKIFQGRLLHILPASQ 373
Query: 378 KKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKH 435
KK+ D+ EL +K +++++ ++ EA+ +T +WNSL+M D V+ ++A +
Sbjct: 374 KKTYKLDEHEL-------SKLPLKKQKQIKRKQEAASSTFSWNSLYMNADAVMSSVAERI 426
Query: 436 GVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNH 495
GVSK+DLLD ++D AV+ A ET VI ETK GVN+ + ++ +R N
Sbjct: 427 GVSKADLLDPTSSDAAVKQAHAETHVIQETKAYFKANGVNLDAFKQ--------RERGNL 478
Query: 496 VFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRY 555
LVKN Y + +L K+F FG + ++++P + T+A+V F P EA AFK LAY++
Sbjct: 479 AILVKNFSYGTKTEDLRKLFEPFGQITRLLMPPSGTIAIVAFARPDEAQKAFKSLAYRKL 538
Query: 556 KGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADI------D 609
L+LE AP D+ + V +G + AD D
Sbjct: 539 GDSILFLEKAPKDLFEADVPPQNPLPETKAVS-------------QGFSTADTFAADEGD 585
Query: 610 PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS-VKVKKHLKN-GKNVSMGFGFI 667
+ + + +LF+KNLNF T +++L + F +G + + +K K KN G+ +SMGFGF
Sbjct: 586 EEVMATATLFIKNLNFSTTNQSLIEAF--RPLDGFVSARIKTKPDPKNPGQTLSMGFGFA 643
Query: 668 EFDSVETATNVCRDLQGTILDGHALILQLCHA-------KKDEQVVKKAEKDKSSTKLLV 720
+F + A + G LD H L+++ H ++ E KK + TK+++
Sbjct: 644 DFKTKAQAQAALAVMNGYTLDRHTLVVRASHKGMDAAEERRKEDTAKKIAARR--TKIII 701
Query: 721 RNVAFEAQRK 730
+N+ F+A +K
Sbjct: 702 KNLPFQATKK 711
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V K + GFGF +F S A N
Sbjct: 699 IIIKNLPFQATKKDVRSLFGAY---GQLRSVRVPKKFDRS---ARGFGFADFVSAREAEN 752
Query: 678 VCRDLQGTILDGHALILQLCH 698
L+ T L G L+L+ +
Sbjct: 753 AMDALKNTHLLGRRLVLEFAN 773
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R F F F + +EAE A+
Sbjct: 697 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMDA 756
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ E A
Sbjct: 757 LKNTHLLGRRLVLEFA 772
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+FV LP T T D+L++HF +V++ H++ KR I +V + E+A +
Sbjct: 1 MESTRVFVSGLPPTLTNDQLKKHFETRFHVTDAHVL----PKRR--IGFVGFKSSEAAQQ 54
Query: 356 AIEVLDNSIFQ 366
A+ + + +
Sbjct: 55 AVSYFNKTYMR 65
>gi|449707231|gb|EMD46930.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 685
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 167/453 (36%), Positives = 266/453 (58%), Gaps = 38/453 (8%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E GR+++ NLP+ TED++R+ F +FGN++E+H+ +DK TK+SKG +VL+ +P+ A +A
Sbjct: 185 EEGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKA 244
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA 416
+DN +GR++HV A+ S++Q +K K++++ E KA +GN
Sbjct: 245 CNEMDNKFIKGRIVHVTYAKADPYSNQQ------VGESKNYKEKKQNELKAK--AGNQFN 296
Query: 417 WNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNV 476
W++L+MR DT V +A + G+ K ++LD A +AVR+AL E VI +TKK L GVN
Sbjct: 297 WSTLYMRQDTAVSAVAEELGMKKEEILDVNAESMAVRVALAENYVINQTKKWLEENGVNC 356
Query: 477 SSLEEFSAGKTDGL--KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLAL 534
+ LE +G+ KRSN++ +VKN+ + E E+ +F KFG+L + ++P +K LAL
Sbjct: 357 TVLE-------NGMKEKRSNNIIIVKNIAASAIELEVKSLFEKFGTLKQFLMPKSKALAL 409
Query: 535 VVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK-- 592
V F +A AFK L Y RY+G+PLYLEWAP V + +K + + + E +K
Sbjct: 410 VEFEVANDAKTAFKRLVYSRYRGIPLYLEWAPEKVFDEEKVNK-KMEEEKLTQEKQSKTI 468
Query: 593 ----------RALLEQQLEGVTDADIDPDRVE--SRSLFVKNLNFKTCDENLRKHFGEHI 640
+Q+ + +T + VE S++L+VKN++FKT ++ +RK F
Sbjct: 469 QKEEDTKKKEEDKKKQEEDKITTKSNQTELVEEGSKTLYVKNISFKTKEDVIRKVFE--- 525
Query: 641 KEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
K GR+L++ + K + GFGF+E+ E A N + LQG ++DGHA+ +++ K
Sbjct: 526 KCGRVLAITLSKTKDKKVEKNSGFGFVEYAKHEDAINAIKTLQGKVIDGHAVQIEISQPK 585
Query: 701 ---KDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+D + K+ E+ K S KLLV+NV FE K
Sbjct: 586 VKDEDHKERKEIEEHKVSNKLLVKNVPFETNIK 618
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI +KNLP+ E L+ F + G ITD K+MRT G SR+F FIGF E +A+ AI
Sbjct: 2 SRIIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQGNSRKFGFIGFENEDQAQTAITK 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
N +Y+ + ++ +A+ +GD + RPWS+YS+ S D+K V+ K E +TI+K
Sbjct: 62 MNGAYIQSSKLQVSLAKAIGDQTIERPWSKYSV-GSSSFSNDKKRKVIPTKH-ETQTIKK 119
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 123/295 (41%), Gaps = 31/295 (10%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ ++NLP A E L++ F KFG +++ V+ S+ ++ + + A AI
Sbjct: 3 RIIIKNLPERADEKILKQQFEKFGGITDCK-VMRTPQGNSRKFGFIGFENEDQAQTAITK 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNS 419
++ + Q L V A+ + G +T+++ + S + N K
Sbjct: 62 MNGAYIQSSKLQVSLAK--------------AIGDQTIERPWSKYSVGSSSFSNDKKRKV 107
Query: 420 LFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGV----- 474
+ + +T + I +K S D L + AN+ ++ G+ + + N +
Sbjct: 108 IPTKHET--QTIKKKKDSSSLDELKKIANERKPKLDNGKKKKFDSEEDDQNNQHMEEEEE 165
Query: 475 -NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP------ 527
+ S + D + NLP++ +E ++ K F +FG++ ++ LP
Sbjct: 166 IINEQEHQKSMDEIDVKDWEEGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITK 225
Query: 528 STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN 582
+K V+F+ P +A A + K KG +++ +A +D S G KN
Sbjct: 226 KSKGFGFVLFVVPQDAVKACNEMDNKFIKGRIVHVTYAKADPYSNQQV--GESKN 278
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L V+N+P+ E+RE F +G + V + D ++KG A+V YA + A+ A+
Sbjct: 603 SNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKVDG-QNKGFAFVEYATKQEAANAM 661
Query: 358 EVLDNSIFQGRLLHVMPAR 376
L NS F GR L + A+
Sbjct: 662 AALKNSHFYGRHLIIEYAK 680
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P +R+ F G + +L + DG+++ FAF+ + T+QEA A+
Sbjct: 604 NKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKVDGQNKGFAFVEYATKQEAANAMAA 663
Query: 61 FNKSYLDTCRISCEIAR 77
S+ + E A+
Sbjct: 664 LKNSHFYGRHLIIEYAK 680
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 39/220 (17%)
Query: 484 AGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEA 543
+ +T+ ++ + VKN+ + + E + K+F K G + + L TK + VE
Sbjct: 493 SNQTELVEEGSKTLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKD-------KKVEK 545
Query: 544 AAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGV 603
+ F + Y +++ D ++ T +G V+ H + +E V
Sbjct: 546 NSGFGFVEYAKHE-----------DAINAIKTLQGK-----VIDGHAVQ---IEISQPKV 586
Query: 604 TDAD------IDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNG 657
D D I+ +V S L VKN+ F+T + +R+ F + G + V++ K + +G
Sbjct: 587 KDEDHKERKEIEEHKV-SNKLLVKNVPFETNIKEVRELFRTY---GTLRGVRLPKKV-DG 641
Query: 658 KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
+N GF F+E+ + + A N L+ + G LI++
Sbjct: 642 QN--KGFAFVEYATKQEAANAMAALKNSHFYGRHLIIEYA 679
>gi|328865472|gb|EGG13858.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 868
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 271/472 (57%), Gaps = 51/472 (10%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+++ ESGRLF+RNL YT TED++++ F G +SEV+I +D+D+K+SKGIA+VL+ IPE
Sbjct: 318 EDIGESGRLFIRNLSYTTTEDDIKKFFEAHGKLSEVYIPIDRDSKKSKGIAFVLFMIPEQ 377
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG 412
A RA LD QGR++H++ A++ S + Q N + T + KQ++E E K A+G
Sbjct: 378 AMRAANDLDGKTLQGRIIHILAAKNAPSKEVQ--LNKDGEKTSSFKQQKERELKT--AAG 433
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNA 472
+ WNSLFMR D ++ ++A ++ +S ++D ++DLAVR+ L ET +I ETKK L
Sbjct: 434 DAYNWNSLFMRSDAIIGSLAERYKLSHGQVIDPNSSDLAVRMTLMETHIINETKKFLQEE 493
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL 532
GV + + GK G+ RSN + LVKN+P+ ++ GEL +MFG++G L +VILP +T+
Sbjct: 494 GVVIEKI----GGK--GIDRSNSIILVKNIPHKTTIGELEEMFGRYGELARVILPPARTM 547
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
ALV F EA A+F+GLAY ++ VPL+LEWAP V ++ +K K +
Sbjct: 548 ALVEFYHVNEAKASFRGLAYSKFHTVPLFLEWAPVGVFKTAAPTKEQIKQKQEKETEQLE 607
Query: 593 RALLEQQLEGVTDA------------DIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHI 640
+ +E + T A +DP + S +++KN++F T D+ L++ F + I
Sbjct: 608 KIKVENESTSSTSATTTTTTTTAIAEQVDPSK--SFYVYIKNISFDTTDDMLKERF-KKI 664
Query: 641 KEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
++ +++ + GK +S GFGF +F + A + G ++DGH L ++L +
Sbjct: 665 RDFMTVNISTRMDPIRGK-LSCGFGFAQFSTKHGAYECIKKWNGALVDGHELSIKLSTSN 723
Query: 701 ------------------------KDEQVVKKAEKDKSSTKLLVRNVAFEAQ 728
KDE+ K+ +K STK+ ++N+AFE +
Sbjct: 724 AATGTDGKASNSANSASNKREDRLKDEE-SKRHDKGFVSTKISIKNIAFECK 774
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KN+ +R F+ GE+ +L G R F F+ + TEQEA+ A++
Sbjct: 762 TKISIKNIAFECKPIEIRKLFTTYGELKSVRLPSKPTGGHRGFGFVEYLTEQEAKNAMEA 821
Query: 61 FNKSYL 66
S+L
Sbjct: 822 LQNSHL 827
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S + +KN+ F+ +RK F + G + SV++ G GFGF+E+ + +
Sbjct: 761 STKISIKNIAFECKPIEIRKLFTTY---GELKSVRLPSKPTGGHR---GFGFVEYLTEQE 814
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKD-EQVVKKAEKDKS 714
A N LQ + L G LIL K+ EQ+ +KA D S
Sbjct: 815 AKNAMEALQNSHLYGRHLILSFAEEDKNIEQLREKASVDYS 855
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++ ++N+ + E+R+ F+ +G + V + K T +G +V Y + A A+
Sbjct: 761 STKISIKNIAFECKPIEIRKLFTTYGELKSVRL-PSKPTGGHRGFGFVEYLTEQEAKNAM 819
Query: 358 EVLDNSIFQGRLLHVMPARHKKS----SDKQELHNSTSQGTKTLKQR 400
E L NS GR L + A K+ +K + S + GT K R
Sbjct: 820 EALQNSHLYGRHLILSFAEEDKNIEQLREKASVDYSKASGTNRSKNR 866
>gi|291407017|ref|XP_002719829.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Oryctolagus cuniculus]
Length = 1025
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 170/464 (36%), Positives = 275/464 (59%), Gaps = 43/464 (9%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLFVRNLPYT+TE++L + FSK+G +SE+H +D TK+ KG A+V + +PE
Sbjct: 369 EEDLADSGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMMPE 428
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A +D +FQGR+LHV+P+ KK + ++ + + G+ + K+++E + KA+ +S
Sbjct: 429 HAVKAYAGVDGQVFQGRMLHVLPSTIKKEASEE----ADAPGSSSYKKKKESKDKANSSS 484
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALT 470
+ WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++ L
Sbjct: 485 SHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLL 542
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV++ S + +AG +RS V L KNLP + EL + FG+FGSL +V+LP
Sbjct: 543 DNGVSLDSFSQ-AAG-----ERSKTVILAKNLPAGTLAAELQETFGRFGSLGRVLLPEGG 596
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH- 589
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V S ++ K +++
Sbjct: 597 VTAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVGVFSGAAPQKKGRRDAPAEPAAE 656
Query: 590 ---------DAKRALLEQQLEGVTDAD------------IDPDRVESRSLFVKNLNFKTC 628
D++ EQ EG D + + + ++F+KNLNF T
Sbjct: 657 DAVEPEAVPDSESPEGEQPSEGGADGPSAEMEEEEEEEEEEEESLPGCTVFIKNLNFSTT 716
Query: 629 DENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTIL 687
+E L++ F K G + S + +K K G+ +SMGFGF+E+ E A + LQG ++
Sbjct: 717 EETLKEVFS---KVGMVKSCSISRKKSKTGELLSMGFGFVEYRKPEQADRALKQLQGHVV 773
Query: 688 DGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEA 727
DGH L +++ + K+ + ++++K+LVRN+ F+A
Sbjct: 774 DGHKLEVRISERATRPALTSARKKQVPRKQTTSKILVRNIPFQA 817
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 158/306 (51%), Gaps = 30/306 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F G +TD L TKDGK R+F FIGF++E EA A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFEAFGTLTDCSLKFTKDGKFRKFGFIGFKSEDEARTALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKT--- 117
FNKS++DT R++ E + GDP PR WS+++ K ++ ++ AKR +KKT
Sbjct: 62 FNKSFIDTSRVAVEFCKSFGDPTKPRAWSKHTQKPSQDKLPSQEPAPAEAKR-DKKTKAP 120
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIG--LMADQKAKVSENISQAIKGGE 173
+ K+ E D + EFL V Q R ++ WAND L L A +KA + ++ G+
Sbjct: 121 SGLGKLKE--DAEFQEFLSVHQRRAQAATWANDALGAEPLRAQRKA-ADDYLNFDSDSGQ 177
Query: 174 KSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDD 233
+S + D + + + + K AA EL SDMDY KS+V + S S S + +
Sbjct: 178 ES-----EEDGAGADVEEEEGPEPKAAARKEL-SDMDYLKSKVVRAGSASSSSSEEEESE 231
Query: 234 DD--DDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDV 291
D+ + DG E EEE+ + + +S G G+E PG+ +
Sbjct: 232 DEAVNCDGGSEPEEEDPPTAATPQGRES-------GGAGQEPG----AQPGHRRAPEARA 280
Query: 292 QQEVLE 297
Q+ VLE
Sbjct: 281 QKNVLE 286
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP T V FL +A
Sbjct: 802 KQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDA 861
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 862 KRAFNALCHSTHLYGRRLVLEWADSEVTLQA 892
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 806 SKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 865
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 866 NALCHSTHLYGRRLVLEWA 884
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASRAIE 358
++ VRN+P+ A E+RE FS FG + V + T +G +V + + A RA
Sbjct: 807 KILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 866
Query: 359 VLDNSI-FQGRLL 370
L +S GR L
Sbjct: 867 ALCHSTHLYGRRL 879
>gi|410976696|ref|XP_003994750.1| PREDICTED: probable RNA-binding protein 19 [Felis catus]
Length = 994
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 172/467 (36%), Positives = 264/467 (56%), Gaps = 50/467 (10%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLFVRNLPY++TE++L + FS+FG +SE+H +D TK+ KG A+V + PE
Sbjct: 388 EEDLADSGRLFVRNLPYSSTEEDLEQLFSRFGPLSELHYPIDSLTKKPKGFAFVTFMFPE 447
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A +D +FQGR+LHV+P+ KK + S+ T T +++K S+
Sbjct: 448 HAVKAYAEVDGQVFQGRMLHVLPSTIKKEA---------SEDTDTSGSSSYKKKKESKDK 498
Query: 412 GNTKA---WNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKK 467
N+ + WN+LF+ P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++
Sbjct: 499 ANSSSSHNWNTLFIGPNAVADAIAQKYSATKSQVFDHETKGSVAVRVALGETQLVQEVRR 558
Query: 468 ALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP 527
L + GV++ S + +A +RS V LVKNLP + EL + FG+FGSL +V+LP
Sbjct: 559 FLLDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLP 612
Query: 528 STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVG 587
A+V FLEP+EA AF+ LAY + + VPLYLEWAP V S S+ K + D G
Sbjct: 613 EGGVTAIVEFLEPLEARRAFRHLAYSKCRHVPLYLEWAPVGVFSSSAPQK-KEPRDPPAG 671
Query: 588 EHDAKRALLEQQLEGVTDADIDPDRVESR----------------------SLFVKNLNF 625
+ A E + T P + +LF+KNLNF
Sbjct: 672 PAEEGAAEPETLPDNETPEGEKPTERGAEDAPAKEEEEEEEEEEEESPPGCTLFIKNLNF 731
Query: 626 KTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQG 684
T +E L++ F + G + S V KK K G+ +SMGFGF+E+ E A + LQG
Sbjct: 732 TTTEETLKEVFS---RVGMVKSCSVSKKKNKTGELLSMGFGFVEYRKPEQAQKALKQLQG 788
Query: 685 TILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEA 727
I+DGH L +++ + K+ + ++++K+LVRN+ F+A
Sbjct: 789 HIVDGHKLEVRISERATKPALTSARKKQVPRKQTTSKILVRNIPFQA 835
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 121/230 (52%), Gaps = 28/230 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFASFGALTDCSLKFTKDGKFRKFGFIGFKSEEEARSALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FN+S++DT RI E + GDP PR WS+++ K + K S+ + + + K+ +K
Sbjct: 62 FNRSFIDTSRIVVEFCKSFGDPTKPRAWSKHAQKTSQSKNPSKGQDSISMEPKKDDKMKK 121
Query: 118 ----IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
+EK+ + D + EFL V Q R ++ WAND L A+ S+ KG
Sbjct: 122 VAGELEKLKK--DAEFREFLSVHQKRTQTATWANDAL-------DAEPSKG-----KGRP 167
Query: 174 KSITLHVKSDKSN-------VITDSQATEKSKNAAADELMSDMDYFKSRV 216
S L+ SD + + AA + +SDMDY KS++
Sbjct: 168 ASDYLNFDSDSGQESDEEGPGEDPEEEGGREPRAAVQQELSDMDYLKSKM 217
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP S + V FL +A
Sbjct: 820 KQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMSGTGSHRGFGFVDFLTKQDA 879
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDV 569
AF L + + G L LEWA S+V
Sbjct: 880 KRAFHALCHSTHLYGRRLVLEWADSEV 906
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASRA 356
+ ++ VRN+P+ A E+RE FS FG + V + T +G +V + + A RA
Sbjct: 823 TSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMSGTGSHRGFGFVDFLTKQDAKRA 882
Query: 357 IEVLDNSI-FQGRLLHV--------MPARHKKSSDK 383
L +S GR L + +PA +K++++
Sbjct: 883 FHALCHSTHLYGRRLVLEWADSEVSLPALRRKTAER 918
>gi|392352553|ref|XP_003751242.1| PREDICTED: probable RNA-binding protein 19 [Rattus norvegicus]
Length = 955
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 181/493 (36%), Positives = 275/493 (55%), Gaps = 67/493 (13%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P SSS Q L +SGRLFVRNL YT++E++L + FS +G +SE+H
Sbjct: 375 GAPKSSSAPWQGRTLGEHEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYP 434
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A+V + PE A +A +D +FQGR+LHV+P+ KK ++++ + +
Sbjct: 435 IDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIKKEANQE----ANA 490
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E KA+ +S + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 491 PGS-SYKKKKEAMDKANSSSSHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSV 547
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E + L + GV + S + +A +RS V L KNLP + E
Sbjct: 548 AVRMALGETQLVQEVRSFLIDNGVCLDSFSQAAA------ERSKTVILAKNLPAGTLAAE 601
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L ++F +FGSL +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 602 LQEIFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGVF 661
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESR-------------- 616
+ K +Q E A++A EQ E V + + + VE
Sbjct: 662 GAAPQKKDSQP------EQPAQKAEAEQ--ETVLNPEGEKALVEGAEASMGKMEEEEEEE 713
Query: 617 ------------SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMG 663
+LF+KNLNF T +E L++ F + G + S + KK K G +SMG
Sbjct: 714 EEEEEEESIPGCTLFIKNLNFNTTEETLKEVFS---RVGAVKSCTISKKKSKAGVLLSMG 770
Query: 664 FGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLL 719
FGF+E+ E A + LQG I+DGH L +++ + K+ K ++++K+L
Sbjct: 771 FGFVEYKKPEQAQKALKRLQGHIVDGHKLEVRISERATKPALTSTRKKQVPKKQTTSKIL 830
Query: 720 VRNVAFEA-QRKI 731
VRN+ F+A QR+I
Sbjct: 831 VRNIPFQANQREI 843
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 206/424 (48%), Gaps = 49/424 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + EDR R F+ G +TD L TK+GK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEDRFRQLFAAFGTLTDCSLKFTKEGKFRKFGFIGFKSEEEAQAALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSED---EKNPVLAAKRGEK 115
F++S++DT RI+ E + GDP+ PR WS+++ K + K+ S+D K+
Sbjct: 62 FHRSFIDTSRITVEFCKSFGDPSKPRAWSKHAQKPSQPKQPSQDSIPSDTKKDKKKKKVP 121
Query: 116 KTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
+EK+ E D + EFL + Q R + WAND L + KAK S +
Sbjct: 122 SDLEKLKE--DAEFQEFLSIHQKRTQVATWANDALEAELPKAKAKPSSDY---------- 169
Query: 176 ITLHVKSDKSNVITDSQATEKSKN------------AAADELMSDMDYFKSRVKKDWSDS 223
L+ SD SN + ++ E+ AA + +SDMDY KS++ + S
Sbjct: 170 --LNFDSD-SNSDSGQESEEEPAGEDGEEEQGLQPKAAVQKELSDMDYLKSKMVRAEVSS 226
Query: 224 ESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGN 283
E ED +D+ + E E EE + + + + + ++ + ++A G++ P +
Sbjct: 227 EDEDKEDSEDEAVNCEEGSEAEEEEGSPTCPAQQAGVNRGAVLGSLRPQEAAGKVEKPAS 286
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
Q+E + +R P+ TE + E + V+ + IV + ++ G
Sbjct: 287 --------QKEPTTPYTVKLRGAPFNVTEKNVLEFLAPLKPVA-IRIVRNAHGNKT-GYV 336
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS---QGTKTLKQR 400
+V + E +A++ + GR + V R K++S + S+S QG +TL +
Sbjct: 337 FVDLSSEEEVKKALKC-NREYMGGRYIEVF--REKQASAARGAPKSSSAPWQG-RTLGEH 392
Query: 401 REEE 404
EEE
Sbjct: 393 EEEE 396
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ +++ E+ ++F FG L V LP T V F+ +A
Sbjct: 823 KQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDA 882
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 883 KKAFNALCHSTHLYGRRLVLEWADSEVTVQA 913
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P + +R+ FS GE+ +L + T G R F F+ F T+Q+A++A
Sbjct: 827 SKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAF 886
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASRA 356
+ ++ VRN+P+ A + E+RE FS FG + V + T +G +V + + A +A
Sbjct: 826 TSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKA 885
Query: 357 IEVLDNSI-FQGRLL 370
L +S GR L
Sbjct: 886 FNALCHSTHLYGRRL 900
>gi|361124073|gb|EHK96194.1| putative Multiple RNA-binding domain-containing protein 1 [Glarea
lozoyensis 74030]
Length = 763
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 231/703 (32%), Positives = 357/703 (50%), Gaps = 92/703 (13%)
Query: 69 CRISCEIARKVGDPNMPRPWSRYSLK-KEKEVSEDEKNPVLAAKRGEKKTIEKVTEND-- 125
+I E+AR + D +P SR + + +E+E + + + K+ E T K +D
Sbjct: 2 SKIGVELARPISDQTLP--VSRKAQREQEREHAATRRKEYESLKKSELNTASKRKRDDVD 59
Query: 126 --DPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKG----GEKSITLH 179
DP+L EFL+VMQP K+K WA+ M K+ QAI+ E +
Sbjct: 60 EADPKLKEFLEVMQPASKAKTWASPVGEEDMEQPPTKI-----QAIEAPDAESEDDYEMV 114
Query: 180 VKSDKSN------------VITDSQATEKSKNAAADEL---MSDMDYFKSRVKK--DWSD 222
K + N VITD A + A + E+ +D D+ +SR + D D
Sbjct: 115 PKRQRKNSPPAPSPTIPVEVITDVPAVPATIEAPSREVPLTATDDDWLRSRTNRLLDLVD 174
Query: 223 SESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGE-IVDP 281
++ ++ G + + + S+++ + + E +A+ E V P
Sbjct: 175 PDTIQEAQGGNQ------------------AQPQVVSVVELAEKTPAPEVEASPEQTVVP 216
Query: 282 GNPSSSSKD-VQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
D V +E+ ++GRLFVRNLPYTATED+LR HF FG + E+H+ VD + SK
Sbjct: 217 LEEEPEKPDPVLEEIAKNGRLFVRNLPYTATEDDLRNHFEPFGPLEEIHLAVDA-SGTSK 275
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
G V Y+ PESA+ A LD FQGRLLH++PA +K+ + E + K ++
Sbjct: 276 GFLLVQYSNPESAAEAFHQLDGEPFQGRLLHILPAANKRENKLDEFAVA-----KLPLKK 330
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
+++ +K +EAS T WNSL+M D V IA + GVSKS+LLD + D V+ A+ ET
Sbjct: 331 QKQIKKKAEASSMTFNWNSLYMNQDAVNTAIAARLGVSKSELLDPTSADAGVKQAIAETS 390
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
VI +TK GV++++ ++ G T LVKN PY + EL KMF +FG
Sbjct: 391 VIQDTKSYFERNGVDINAFKKRERGDTS--------ILVKNFPYGMTLEELRKMFEEFGQ 442
Query: 521 LDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK--- 577
+ +V++P T T+A+V F +P A AAF LAY+R K LYLE P D+ + ++++
Sbjct: 443 VLRVLMPPTGTIAIVEFAQPTHARAAFGSLAYRRMKDSILYLEKGPKDLFTTAASTAAPA 502
Query: 578 --GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKH 635
G Q+ D+ + A LLE++ D +++ +LFV+NLNF T L +
Sbjct: 503 SLGQQEADSSAHKVSASD-LLERESAN--------DGLDTTTLFVRNLNFTTTSARLTET 553
Query: 636 FGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHAL 692
F +G LS +V K G+ +SMGFGF+EF + + A + + G LD H L
Sbjct: 554 FKPL--DG-FLSARVNTKTDPKKPGQVLSMGFGFLEFRTKDQAQAALKAMDGYTLDDHKL 610
Query: 693 ILQLCHAKKD--EQVVKKAEKDKSS---TKLLVRNVAFEAQRK 730
+++ H D E+ K+ K S TK++++N+ FEA +K
Sbjct: 611 LIKASHKGVDAAEERRKEDRAKKISGKRTKIIIKNLPFEASKK 653
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP ++ +R F G++ ++ + D +R FAF F T +EAE A++
Sbjct: 639 TKIIIKNLPFEASKKDIRTLFGTYGQLRSVRMPKKFDHSARGFAFADFITAREAENALEA 698
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ E A
Sbjct: 699 LKDTHLLGRRLVLEFA 714
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
++KNLP+++S+ ++ +FG +G L V +P S + A F+ EA A + L
Sbjct: 641 IIIKNLPFEASKKDIRTLFGTYGQLRSVRMPKKFDHSARGFAFADFITAREAENALEALK 700
Query: 552 YKRYKGVPLYLEWAPSDVL 570
G L LE+A D +
Sbjct: 701 DTHLLGRRLVLEFAAEDSI 719
>gi|410923148|ref|XP_003975044.1| PREDICTED: probable RNA-binding protein 19-like [Takifugu rubripes]
Length = 941
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 174/439 (39%), Positives = 266/439 (60%), Gaps = 24/439 (5%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
V ESGRLFVRNLPYT TE+EL+E F+K G +SE+H +D TK++KG A++ Y IPE+A
Sbjct: 409 VAESGRLFVRNLPYTCTEEELKELFAKHGPLSELHFPIDSLTKKTKGFAFITYMIPENAV 468
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT 414
A+ LD +FQGR+LH++P+ KK +K + ++ + G+ + K++++ + KA S N+
Sbjct: 469 AALAQLDGHVFQGRMLHLLPSTVKK--EKADPSDAGAPGSSSYKRQKDAKTKA--LSSNS 524
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALTNAG 473
WN+LF+ + V + IA K+ +KS +LD E+ +AVR+ALGETQ++ ET++ L
Sbjct: 525 HNWNTLFLGTNAVADAIAEKYNTTKSQVLDHESKGSIAVRMALGETQIVQETRQFLLANS 584
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
V + S + +A +RS V LVKNLP + EL ++F GSL +V+LP + A
Sbjct: 585 VCLDSFSQAAA------QRSTTVILVKNLPAGVASSELEELFSAHGSLGRVLLPPSGLTA 638
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKR 593
+V FLEP EA AF LAY +++ VPLYLEWAP DV + Q+ ++V G+ +
Sbjct: 639 IVEFLEPTEAKRAFTRLAYSKFQHVPLYLEWAPGDVFVAA-----KQEQESVTGKDEGLM 693
Query: 594 ALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEG-RILSVKVKK 652
E++ + + + + +LF+KNLNF T +E L++ F K G KK
Sbjct: 694 EEEEKKNVEEEEEEQEEESSPGSTLFIKNLNFSTTEETLQETFS---KCGKVKSCSVSKK 750
Query: 653 HLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH--AKKDEQVVKKAE 710
K+GK++SMG+GF+++ E A R LQ +DGH L L++ +K E KK +
Sbjct: 751 KDKSGKSLSMGYGFVQYHKAEAAQKALRQLQHCSVDGHQLQLKISERATRKTEVSSKKKQ 810
Query: 711 --KDKSSTKLLVRNVAFEA 727
K ++ TK+L RN+ F+A
Sbjct: 811 VGKKQTGTKILARNIPFQA 829
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 119/244 (48%), Gaps = 22/244 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R + F+ G +TD L TKDGK R+F F+GFR+E+EA A+
Sbjct: 2 SRLIVKNLPNGMKEERFKSMFAAFGTVTDCSLKFTKDGKFRKFGFVGFRSEEEANRALAQ 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
NKS++DT R++ EI + GDP + WS++S + NP + + K ++
Sbjct: 62 LNKSFVDTSRVTVEICKAFGDPTKAKAWSKHSQVSPTDKPSTNLNPAHTDSKKKNKQKKE 121
Query: 121 VTEN-----DDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
+ +D + EFL V Q R ++ W NDT+ A V + K
Sbjct: 122 TSSTLLNLEEDQEFKEFLSVHQRRDQAPTWTNDTV-----QTSAAVGIQLKSQCKKDVSD 176
Query: 176 ITLHVKSDKSNVITDSQATEK------------SKNAAADELMSDMDYFKSRVKKDWSDS 223
L+ SD S+V + + E+ + A +SDMDY +S+V + +
Sbjct: 177 DYLNFDSDDSDVAEEDEQAEEDDDAEDDNDDDGTNKGALTSGLSDMDYLRSKVAQTVNTL 236
Query: 224 ESED 227
E E+
Sbjct: 237 EEEE 240
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 489 GLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPV 541
G K++ L +N+P+ +S EL ++F FG L V LP + + + F+
Sbjct: 812 GKKQTGTKILARNIPFQASVRELRELFCTFGELKTVRLPKKAAGSGNHRGFGFIDFVTKH 871
Query: 542 EAAAAFKGLAYKRY-KGVPLYLEWA 565
+A AF L + + G L LEWA
Sbjct: 872 DAKKAFDALCHSTHLYGRRLVLEWA 896
>gi|432874359|ref|XP_004072458.1| PREDICTED: probable RNA-binding protein 19-like [Oryzias latipes]
Length = 921
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 173/439 (39%), Positives = 263/439 (59%), Gaps = 29/439 (6%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
V E+GRLFVRNLPYT TE+++RE FSK G +SEV +D TK+ KG A+V Y IPE+A
Sbjct: 394 VSETGRLFVRNLPYTCTEEDIRELFSKHGPLSEVLFPIDNLTKKPKGFAFVTYMIPENAV 453
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT 414
A+ LD +FQGR+LH++P+ KK + E ++ G+ + K++++ + KAS +S +
Sbjct: 454 TALAQLDRHVFQGRMLHLLPSTVKK--ENPESSDAGGPGSSSYKRQKDAKNKASSSSSHN 511
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALTNAG 473
WN+LF+ + V + IA K+ +KS +LD E+ LAVR+ALGETQ++ ET++ L
Sbjct: 512 --WNTLFLGTNAVADAIAEKYNTTKSQVLDHESKGSLAVRMALGETQIVQETRQFLLENS 569
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
V++ S + +A RS V LVKNLP + EL ++F GSL +V+LP + A
Sbjct: 570 VSLDSFSQAAAA------RSTTVILVKNLPAGVTTSELEELFSPHGSLGRVLLPPSGLTA 623
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKR 593
++ FLEP EA AF LAY ++ VPLYLEWAP V + K + V + D ++
Sbjct: 624 IIEFLEPTEAKRAFTRLAYSKFHHVPLYLEWAPVGVFVADQQKTVSNKEETVKEKKDLEK 683
Query: 594 ALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KK 652
+++ + V + +LF+KNL+F T +E L++ F K G++ + KK
Sbjct: 684 EEEDEEEDAVPGS----------TLFIKNLSFITTEEKLQETFS---KCGKVKFCSISKK 730
Query: 653 HLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL----CHAKKDEQVVKK 708
K+GK +SMG+GF+++ S E A R LQ +D H L L++ A + + K+
Sbjct: 731 KDKSGKLLSMGYGFVQYQSAEGAQKALRQLQHCSVDDHKLELKISDKATRATETSRKKKQ 790
Query: 709 AEKDKSSTKLLVRNVAFEA 727
AEK ++ +K+LVRNV F+A
Sbjct: 791 AEKKQTGSKILVRNVPFQA 809
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 87/154 (56%), Gaps = 2/154 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R F+ G +TD L TKDGK R+F F+GF++E++A A+K+
Sbjct: 2 SRLIVKNLPNGMKEERFSSMFAAFGTVTDCSLKFTKDGKFRKFGFVGFKSEEDASRALKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRY--SLKKEKEVSEDEKNPVLAAKRGEKKTI 118
FN+S++DT R++ EI + GDP + WS++ S +EK + + I
Sbjct: 62 FNRSFVDTSRVTVEICKAFGDPTKGKAWSKHTQSAGQEKPSGPAPTEGKKKKNQKKDTAI 121
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIG 152
+D + EFL V Q R ++ WAND + G
Sbjct: 122 GLGNLEEDQEFKEFLSVHQNRSQAPTWANDAVQG 155
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPVEA 543
K++ LV+N+P+ ++ E+ ++F FG L V LP + + V F+ +A
Sbjct: 794 KQTGSKILVRNVPFQATVREIRELFCTFGELKTVRLPKKAAGSGNHRGFGFVDFITKQDA 853
Query: 544 AAAFKGLAYKRY-KGVPLYLEWA 565
AF L + + G L LEWA
Sbjct: 854 KKAFAALCHSTHLYGRRLVLEWA 876
>gi|30794154|ref|NP_083038.1| probable RNA-binding protein 19 [Mus musculus]
gi|73621449|sp|Q8R3C6.1|RBM19_MOUSE RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
gi|19343654|gb|AAH25619.1| RNA binding motif protein 19 [Mus musculus]
gi|21707580|gb|AAH34010.1| RNA binding motif protein 19 [Mus musculus]
gi|148687830|gb|EDL19777.1| RNA binding motif protein 19 [Mus musculus]
Length = 952
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 175/472 (37%), Positives = 269/472 (56%), Gaps = 56/472 (11%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLFVRNL YT++E++L + FS +G +SE+H +D TK+ KG A+V + PE
Sbjct: 393 EEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPE 452
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A +D +FQGR+LHV+P+ KK + ++ + + G+ + K+++E KA+ +S
Sbjct: 453 HAVKAYAEVDGQVFQGRMLHVLPSTIKKEASQE----ANAPGS-SYKKKKEAMDKANSSS 507
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALT 470
+ WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E + L
Sbjct: 508 SHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETRGSVAVRVALGETQLVQEVRSFLI 565
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV + S + +A +RS V L KNLP + E+ + F +FGSL +V+LP
Sbjct: 566 DNGVCLDSFSQAAA------ERSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGG 619
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHD 590
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V + K +Q E
Sbjct: 620 ITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGVFGAAPQKKDSQH------EQP 673
Query: 591 AKRALLEQQLEGVTDADIDPDRVESR-------------------------SLFVKNLNF 625
A++A +EQ E V D + + VE +LF+KNLNF
Sbjct: 674 AEKAEVEQ--ETVLDPEGEKASVEGAEASTGKMEEEEEEEEEEEEESIPGCTLFIKNLNF 731
Query: 626 KTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQG 684
T +E L+ F K G I S + KK K G +SMGFGF+E+ E A + LQG
Sbjct: 732 STTEETLKGVFS---KVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQG 788
Query: 685 TILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEA-QRKI 731
+DGH L +++ + K+ K ++++K+LVRN+ F+A QR+I
Sbjct: 789 HTVDGHKLEVRISERATKPALTSTRKKQVPKKQTTSKILVRNIPFQANQREI 840
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 124/232 (53%), Gaps = 31/232 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQAALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDE--KNPVLAAKRGEKK 116
F++S++DT RI+ E + GDP+ PR WS+++ K + K+ S+D + K+
Sbjct: 62 FHRSFIDTTRITVEFCKSFGDPSKPRAWSKHAQKSSQPKQPSQDSVPSDTKKDKKKKGPS 121
Query: 117 TIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSI 176
+EK+ E D + EFL + Q R + WAND L + K K S +
Sbjct: 122 DLEKLKE--DAKFQEFLSIHQKRTQVATWANDALEAKLPKAKTKASSDY----------- 168
Query: 177 TLHVKSDKSNVITDSQATEKS------------KNAAADELMSDMDYFKSRV 216
L+ SD SN + ++ E+ AA + +SDMDY KS++
Sbjct: 169 -LNFDSD-SNSDSGQESEEEPAREDPEEEQGLQPKAAVQKELSDMDYLKSKM 218
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 131/331 (39%), Gaps = 64/331 (19%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ +NLP E++E FS+FG++ V + T A V + P A +A L
Sbjct: 586 ILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGIT------AIVEFLEPLEARKAFRHL 639
Query: 361 DNSIFQGRLLHVMPA--------------RHKKSSDKQELHNST---------------- 390
S F L++ A +H++ ++K E+ T
Sbjct: 640 AYSKFHHVPLYLEWAPIGVFGAAPQKKDSQHEQPAEKAEVEQETVLDPEGEKASVEGAEA 699
Query: 391 SQGTKTLKQRREEERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREAND 449
S G ++ EEE + G T +L F + ++ + K G KS + ++ N
Sbjct: 700 STGKMEEEEEEEEEEEEESIPGCTLFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNK 759
Query: 450 LAVRIALG----ETQVIAETKKALTNAG----------VNVSSLEEFSA-----GKTDGL 490
V +++G E + + +KAL V +S A K
Sbjct: 760 AGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISERATKPALTSTRKKQVPK 819
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ +++ E+ ++F FG L V LP T V F+ +A
Sbjct: 820 KQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDA 879
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 880 KKAFNALCHSTHLYGRRLVLEWADSEVTVQT 910
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P + +R+ FS GE+ +L + T G R F F+ F T+Q+A++A
Sbjct: 824 SKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAF 883
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 884 NALCHSTHLYGRRLVLEWA 902
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASRA 356
+ ++ VRN+P+ A + E+RE FS FG + V + T +G +V + + A +A
Sbjct: 823 TSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKA 882
Query: 357 IEVLDNSI-FQGRLL 370
L +S GR L
Sbjct: 883 FNALCHSTHLYGRRL 897
>gi|384483751|gb|EIE75931.1| hypothetical protein RO3G_00635 [Rhizopus delemar RA 99-880]
Length = 831
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 179/443 (40%), Positives = 250/443 (56%), Gaps = 44/443 (9%)
Query: 289 KDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYA 348
KD + + E+GRLF+RNL Y TED+L+E F K+G +SEVH+ + KDTK+SKG AY+ Y
Sbjct: 348 KDPKDLIAETGRLFIRNLTYACTEDDLKEVFEKYGTLSEVHMPIAKDTKKSKGYAYISYL 407
Query: 349 IPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKAS 408
+PE A +A E LD FQGRLLH++P K + ++EL GTK
Sbjct: 408 LPEHALKAYEALDMKTFQGRLLHIIPGEEKPPTKEEELMGP--NGTK------------- 452
Query: 409 EASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKA 468
D + E+IA + GVSKS++L+ +AN++AVR+AL ETQ++ ETK+
Sbjct: 453 ------------LSSADAIAESIADRLGVSKSEVLNADANNMAVRLALAETQIVNETKEF 500
Query: 469 LTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS 528
G+ + + GK + RS + LVKN+PY ++E ++ ++FGK+G L +V++P
Sbjct: 501 FEKHGIVLDTF-----GKKE---RSETIILVKNIPYGTTEEDMRELFGKYGELGRVLMPP 552
Query: 529 TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGE 588
KT+A+V FLEP EA AFK LAY+RYK +YLE APS + G E
Sbjct: 553 AKTIAVVEFLEPSEARNAFKSLAYRRYKDSLIYLEKAPSGLFRDKFVRGGANDKKEQKVE 612
Query: 589 HDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSV 648
+ K + L ++ D S+FVKN++F T E+LR F + I R +
Sbjct: 613 EEKKPKSATELLAAEEESSDD-----ITSIFVKNISFSTTVESLRNAF-KGIPGYRSSRI 666
Query: 649 KVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVK 707
VK KN GK +SMG+GF+EFDS A +QG +LD HAL L+L H K
Sbjct: 667 NVKPDPKNTGKTLSMGYGFVEFDSKSNAEKAINAMQGYLLDEHALQLKLSHHKAGTN--S 724
Query: 708 KAEKDKSSTKLLVRNVAFEAQRK 730
K K +TKL+VRNV FEA K
Sbjct: 725 KKSKTPETTKLVVRNVPFEATDK 747
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 282 GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
NP K+ + + E RL V+NLP +E++ REHF+K G V++ +V K S+
Sbjct: 90 ANPDIFEKNTKNKC-EGSRLIVKNLPKELSEEKFREHFAKKGEVTDAKLVKTKHGS-SRR 147
Query: 342 IAYVLYAIPESASRAIEVLDNSI 364
++ Y A AI+ +N+
Sbjct: 148 FGFIGYKTEAVADAAIQYFNNTF 170
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E+ L V+N+ F+ D++LR+ FG + G++ S+++ K G GF F++F + +
Sbjct: 731 ETTKLVVRNVPFEATDKDLRELFGSY---GQLKSLRMPKKFTGGHR---GFAFLDFLTKQ 784
Query: 674 TATNVCRDLQGTILDGHALILQLCH 698
A NV ++ L G L+L+
Sbjct: 785 EAKNVYDNMGNIHLYGRHLVLEWAQ 809
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEA 54
+++ V+N+P T+ LR+ F G++ ++ + G R FAF+ F T+QEA
Sbjct: 733 TKLVVRNVPFEATDKDLRELFGSYGQLKSLRMPKKFTGGHRGFAFLDFLTKQEA 786
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-----LALVVFLEPVEAAAAFKGLA 551
+V+N+P+++++ +L ++FG +G L + +P T A + FL EA + +
Sbjct: 735 LVVRNVPFEATDKDLRELFGSYGQLKSLRMPKKFTGGHRGFAFLDFLTKQEAKNVYDNMG 794
Query: 552 YKRYKGVPLYLEWAPSDVLSQSSTSKGNQK 581
G L LEWA + S+ G++K
Sbjct: 795 NIHLYGRHLVLEWAQEGDKASESSLDGSRK 824
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E+ +L VRN+P+ AT+ +LRE F +G + + + K T +G A++ + + A
Sbjct: 731 ETTKLVVRNVPFEATDKDLRELFGSYGQLKSLRM-PKKFTGGHRGFAFLDFLTKQEAKNV 789
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEE 404
+ + N GR L + A+ + + L S K+RREE+
Sbjct: 790 YDNMGNIHLYGRHLVLEWAQEGDKASESSLDGSR-------KRRREED 830
>gi|365757846|gb|EHM99718.1| Mrd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 879
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 193/574 (33%), Positives = 306/574 (53%), Gaps = 87/574 (15%)
Query: 186 NVITDSQATEKSKNAAADELMSDMDYFKSR---VKKDWSDSESEDD-SAGDDDDDDDGEE 241
+V D K +N A DE +SD+D+FK R +K+ ++ + +A + +D D EE
Sbjct: 254 DVNNDEAENAKRRNLAQDEQVSDLDWFKQRRIRIKESGAEVRGKPSLTAIEQNDSVDAEE 313
Query: 242 EEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKD-VQQEVLESGR 300
E+ E P P + ++ +++ E+GR
Sbjct: 314 EQPE-----------------------------------PTVPQKTDEERAIEKINETGR 338
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LF+RN+ Y + E++ + F FG++ EVH+ +D T +SKG AYVL+ P++A A L
Sbjct: 339 LFLRNILYNSKEEDFKALFGPFGDLEEVHVALDTRTGQSKGFAYVLFKDPKNAVNAYVEL 398
Query: 361 DNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWN 418
D IFQGRLLH++P KKS D+ +L N LK+++E +RKA+ AS T +WN
Sbjct: 399 DKQIFQGRLLHILPGEEKKSHRLDEFDLKNM------PLKKQKELKRKAA-ASKQTFSWN 451
Query: 419 SLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSS 478
SL+M D V+ ++A K G+ KS L+D E ++ AV+ AL E VI + +K + GV+++
Sbjct: 452 SLYMNQDAVLGSVAAKLGLEKSQLIDAENSNSAVKQALAEAHVIGDVRKYFESKGVDLTK 511
Query: 479 LEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFL 538
+ + +R + V LVKN PY ++ EL +MF +G L+++++P T+A+V F
Sbjct: 512 FTQLKSSN----QRDDRVILVKNFPYGTTREELGEMFVPYGKLERLLMPPAGTIAIVQFR 567
Query: 539 EPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQ 598
+ A AAF L+YKR+K +YLE P D S+ + S D ++ + A+ EQ
Sbjct: 568 DSTSARAAFTKLSYKRFKDGIIYLEKGPKDCFSKPAES------DDLIDDTSAE----EQ 617
Query: 599 Q------------LEGVTDADIDPDRVE--------SRSLFVKNLNFKTCDENLRKHFGE 638
Q +E TDA+ + + S+F+KNLNF T ++NL F
Sbjct: 618 QKAVEIKPSSNDLMETNTDANEESSATHEEDIAEGPTVSIFIKNLNFSTTNQNLTDRFKA 677
Query: 639 HIKEGRILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL 696
G +++ VK K K+ GK +SMGFGF+EF + E A V + GT++DGH + L+L
Sbjct: 678 F--SGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQANAVISAMDGTVIDGHKIQLKL 735
Query: 697 CHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
H + + K + +K S K++V+N+ FEA RK
Sbjct: 736 SHRQSSQNSNTKTKSNKRSGKIIVKNLPFEATRK 769
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG++ V+NLP+ AT ++ E F+ FG + V V K K ++G A+V + +P+ A A+
Sbjct: 754 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAENAM 812
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNST 390
+ L GR L + A + ++E+ T
Sbjct: 813 DQLHGVHLLGRRLIMQYAEEDAVNAEEEIARMT 845
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 483 SAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVF 537
S KT KRS + +VKNLP++++ ++ ++F FG L V +P S + A V F
Sbjct: 744 SNTKTKSNKRSGKI-IVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEF 802
Query: 538 LEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS 571
L P EA A L G L +++A D ++
Sbjct: 803 LLPKEAENAMDQLHGVHLLGRRLIMQYAEEDAVN 836
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+I VKNLP T + + F+ G++ ++ + D +R FAF+ F +EAE A+
Sbjct: 756 KIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQL 815
Query: 62 NKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKK 116
+ +L R+ + A + N +R + K K+V+ +E L K G KK
Sbjct: 816 HGVHLLGRRLIMQYAEEDA-VNAEEEIARMTKKVRKQVATNEM-AALRNKGGRKK 868
>gi|348528569|ref|XP_003451789.1| PREDICTED: probable RNA-binding protein 19 [Oreochromis niloticus]
Length = 926
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 176/443 (39%), Positives = 256/443 (57%), Gaps = 41/443 (9%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
GRLF+RNLPYT TE++++E FSK G +S+V +D TKR KG A+V Y IPE+A A+
Sbjct: 399 GRLFIRNLPYTCTEEDIKELFSKHGPLSDVLFPIDTLTKRPKGFAFVTYMIPENAVTALA 458
Query: 359 VLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWN 418
LD IFQGR+LH++P S+ K+E +S + G + +R+++ K S ++ WN
Sbjct: 459 QLDGHIFQGRMLHLLP-----STAKKEKSDSDAGGPGSSSYKRQKDAKTKALSSSSHNWN 513
Query: 419 SLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALTNAGVNVS 477
+LF+ V + IA K+ +KS +LD E+ +AVR+ALGETQ++ ET++ L + V++
Sbjct: 514 TLFLGTSAVADAIAEKYNTTKSQVLDHESKGSVAVRMALGETQIVQETRQFLLDNSVSLD 573
Query: 478 SLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVF 537
S + +A RSN V LVKNLP EL ++F +GSL +V+LP + A+V F
Sbjct: 574 SFSQAAAA------RSNTVILVKNLPAGVQASELEELFSPYGSLGRVLLPPSGLTAIVEF 627
Query: 538 LEPVEAAAAFKGLAYKRYKGVPLYLEWA--------PSDVLSQSSTSKGNQKNDAVVGEH 589
LEP EA AF LAY ++ VPLYLEWA P VL + + K +K + E
Sbjct: 628 LEPTEAKRAFTRLAYSKFHHVPLYLEWAPVGVFVAKPEPVLEKKAAEKEEKKKENEEEEG 687
Query: 590 DAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVK 649
D + E+ L G T LF+KNLNF T +E L + F K G++ S
Sbjct: 688 DDEEEEEEEALPGST-------------LFIKNLNFNTTEEKLLETFS---KCGKVKSCT 731
Query: 650 V-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV-- 706
+ KK K GK +SMG+GF+++ + E A R LQ +D H L L++ VV
Sbjct: 732 ISKKKDKTGKLLSMGYGFVQYQTAEAAQKALRQLQHCKVDDHQLELKVSERATRTAVVTR 791
Query: 707 --KKAEKDKSSTKLLVRNVAFEA 727
K+A+K ++ +K+LVRNV F+A
Sbjct: 792 KKKQADKKQTGSKILVRNVPFQA 814
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 95/160 (59%), Gaps = 11/160 (6%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + EDR R F+ G +TD L TKDGK R+F F+GF++E++A +A+K+
Sbjct: 2 SRLIVKNLPNGMKEDRFRSMFAAFGTLTDCSLKFTKDGKFRKFGFVGFKSEEDANKALKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRY---SLKKEKEVSEDEKNPVLAAKRGEKKT 117
FNKS++DT R++ E+ + GDP+ R WS++ S + + D + G + T
Sbjct: 62 FNKSFVDTSRVTVEMCKAFGDPSKARAWSKHTQSSGQGKPSAPADTDGKKVGNTCGREIT 121
Query: 118 IEKVTEN--------DDPQLLEFLQVMQPRVKSKMWANDT 149
++ E+ ++P+ EFL V Q R ++ WANDT
Sbjct: 122 KKQKKESSSILGDLEEEPEFKEFLSVHQNRSQAPTWANDT 161
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPVEA 543
K++ LV+N+P+ +S E+ ++F FG L V LP S + V FL +A
Sbjct: 799 KQTGSKILVRNVPFQASVREIRELFCTFGELKTVRLPKKAAGSGSHRGFGFVDFLTKQDA 858
Query: 544 AAAFKGLAYKRY-KGVPLYLEWA 565
AF L + + G L LEWA
Sbjct: 859 KKAFAALCHSTHLYGRRLVLEWA 881
>gi|67479353|ref|XP_655058.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 685
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 166/453 (36%), Positives = 265/453 (58%), Gaps = 38/453 (8%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E GR+++ NLP+ TED++R+ F +FGN++E+H+ +DK TK+SKG +VL+ +P+ A +A
Sbjct: 185 EEGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKA 244
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA 416
+DN +GR++HV A+ S++Q +K K++++ E KA +GN
Sbjct: 245 CNEMDNKFIKGRIVHVTYAKADPYSNQQ------VGESKNYKEKKQNELKAK--AGNQFN 296
Query: 417 WNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNV 476
W++L+MR DT V +A + G+ K ++LD A +AVR+AL E VI +TKK L GVN
Sbjct: 297 WSTLYMRQDTAVSAVAEELGMKKEEILDVNAESMAVRVALAENYVINQTKKWLEENGVNC 356
Query: 477 SSLEEFSAGKTDGLKR--SNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLAL 534
+ LE +G+K SN++ +VKN+ + E E+ +F KFG+L + ++P +K LAL
Sbjct: 357 TVLE-------NGMKEKCSNNIIIVKNIAASAIELEVKSLFEKFGTLKQFLMPKSKALAL 409
Query: 535 VVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK-- 592
V F +A AFK L Y RY+G+PLYLEWAP V + +K + + + E +K
Sbjct: 410 VEFEVANDAKTAFKRLVYSRYRGIPLYLEWAPEKVFDEEKVNK-KMEEEKLTQEKQSKTI 468
Query: 593 ----------RALLEQQLEGVTDADIDPDRVE--SRSLFVKNLNFKTCDENLRKHFGEHI 640
+Q+ + +T + VE S++L+VKN++FKT ++ +RK F
Sbjct: 469 QKEEDTKKKEEDKKKQEEDKITTKSNQTELVEEGSKTLYVKNISFKTKEDVIRKVFE--- 525
Query: 641 KEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
K GR+L++ + K + GFGF+E+ E A N + LQG ++DGHA+ +++ K
Sbjct: 526 KCGRVLAITLSKTKDKKVEKNSGFGFVEYAKHEDAINAIKTLQGKVIDGHAVQIEISQPK 585
Query: 701 ---KDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+D + K+ E+ K S KLLV+NV FE K
Sbjct: 586 VKDEDHKERKEIEEHKVSNKLLVKNVPFETNIK 618
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI +KNLP+ E L+ F + G ITD K+MRT G SR+F FIGF E +A+ AI
Sbjct: 2 SRIIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQGNSRKFGFIGFENEDQAQTAITK 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
N +Y+ + ++ +A+ +GD + RPWS+YS+ S D+K V+ K E +TI+K
Sbjct: 62 MNGAYIQSSKLQVSLAKAIGDQTIERPWSKYSV-GSSSFSNDKKRKVIPTKH-ETQTIKK 119
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 123/295 (41%), Gaps = 31/295 (10%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ ++NLP A E L++ F KFG +++ V+ S+ ++ + + A AI
Sbjct: 3 RIIIKNLPERADEKILKQQFEKFGGITDCK-VMRTPQGNSRKFGFIGFENEDQAQTAITK 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNS 419
++ + Q L V A+ + G +T+++ + S + N K
Sbjct: 62 MNGAYIQSSKLQVSLAK--------------AIGDQTIERPWSKYSVGSSSFSNDKKRKV 107
Query: 420 LFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGV----- 474
+ + +T + I +K S D L + AN+ ++ G+ + + N +
Sbjct: 108 IPTKHET--QTIKKKKDSSSLDELKKIANERKPKLDNGKKKKFDSEEDDQNNQHMEEEEE 165
Query: 475 -NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP------ 527
+ S + D + NLP++ +E ++ K F +FG++ ++ LP
Sbjct: 166 IINEQEHQKSMDEIDVKDWEEGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITK 225
Query: 528 STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN 582
+K V+F+ P +A A + K KG +++ +A +D S G KN
Sbjct: 226 KSKGFGFVLFVVPQDAVKACNEMDNKFIKGRIVHVTYAKADPYSNQQV--GESKN 278
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L V+N+P+ E+RE F +G + V + D ++KG A+V YA + A+ A+
Sbjct: 603 SNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKVDG-QNKGFAFVEYATKQEAANAM 661
Query: 358 EVLDNSIFQGRLLHVMPAR 376
L NS F GR L + A+
Sbjct: 662 AALKNSHFYGRHLIIEYAK 680
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P +R+ F G + +L + DG+++ FAF+ + T+QEA A+
Sbjct: 604 NKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKVDGQNKGFAFVEYATKQEAANAMAA 663
Query: 61 FNKSYLDTCRISCEIAR 77
S+ + E A+
Sbjct: 664 LKNSHFYGRHLIIEYAK 680
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 39/220 (17%)
Query: 484 AGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEA 543
+ +T+ ++ + VKN+ + + E + K+F K G + + L TK + VE
Sbjct: 493 SNQTELVEEGSKTLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKD-------KKVEK 545
Query: 544 AAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGV 603
+ F + Y +++ D ++ T +G V+ H + +E V
Sbjct: 546 NSGFGFVEYAKHE-----------DAINAIKTLQGK-----VIDGHAVQ---IEISQPKV 586
Query: 604 TDAD------IDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNG 657
D D I+ +V S L VKN+ F+T + +R+ F + G + V++ K + +G
Sbjct: 587 KDEDHKERKEIEEHKV-SNKLLVKNVPFETNIKEVRELFRTY---GTLRGVRLPKKV-DG 641
Query: 658 KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
+N GF F+E+ + + A N L+ + G LI++
Sbjct: 642 QN--KGFAFVEYATKQEAANAMAALKNSHFYGRHLIIEYA 679
>gi|225680707|gb|EEH18991.1| multiple RNA-binding domain-containing protein [Paracoccidioides
brasiliensis Pb03]
Length = 805
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 222/761 (29%), Positives = 370/761 (48%), Gaps = 100/761 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D LR FS + ++TDA ++ R+ F+GF+T A++A+ Y
Sbjct: 5 TRVFVSGLPPTFSNDDLRKHFSIRFQVTDAHVI-----PKRRIGFVGFKTPSLAQDAVDY 59
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNKSY+ +I+ E+AR + D P +S K+ A K+ ++
Sbjct: 60 FNKSYIRMSKIAVEMARPI-DAEPPTVGKSHS-----------KHGTSANSTSLKRKHDQ 107
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLI-----------GLMADQKAKVSENISQAI 169
V + D +L E++ MQP +KSK WA+D+++ ++ A+ SE ++ +
Sbjct: 108 VEQKQDLKLQEYIAAMQPPMKSKTWADDSIMVDTNAVPANNATIIPSINAEKSEVQNKRL 167
Query: 170 KGGEKSITLHVKSDKSNVITDSQATEKSKNAAADE----------LMSDMDYFKSRVKKD 219
K +S+ + + DS AT K ++ ++ SDMD+ +SR +
Sbjct: 168 KLDHQSLKKKQMERPNQITEDSLATPKPRSVESENDPQVESVEEAPKSDMDWLRSRTSRL 227
Query: 220 WSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIV 279
E EDD DD + E + + DS+ E + ++ S + ++
Sbjct: 228 LGLVEEEDD------DDGSAVTPQVREIEASDDSDREI-VMGRNCPESPLPRQNETPNPS 280
Query: 280 DPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS 339
D P ++ + + E+GRLFVRNLPY +E +L F FG + E +
Sbjct: 281 DDKEPFDANIGL---LRETGRLFVRNLPYNTSESDLEPLFVSFGKIDEAN---------- 327
Query: 340 KGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTL 397
PE+A +A +VLD F+GRLLH++PA KK+ D+ EL +K
Sbjct: 328 ----------PEAAIQAYQVLDGKDFEGRLLHILPASPKKTYKLDEYEL-------SKLP 370
Query: 398 KQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALG 457
+++++ ++ EA + WNSL+M D V+ +I+ + GVSKS+LLD ++D AV+ A
Sbjct: 371 LKKQQQIKRKQEALSSNFNWNSLYMNADAVMSSISERLGVSKSELLDPTSSDAAVKQAHA 430
Query: 458 ETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGK 517
ET VI ETK ++ GVN+ S ++ G N LVKN + +L K+F
Sbjct: 431 ETHVIQETKAYFSSNGVNLDSFKQREQG--------NTAILVKNFSFSVKAEDLRKLFES 482
Query: 518 FGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
+G + ++++P + T+A+V F E AFKGLAY++ L+LE AP D+ + K
Sbjct: 483 YGEIKRLLMPPSGTIAIVEFALADECQKAFKGLAYRKLGDSILFLERAPKDLFDE----K 538
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
N + + ++AD + +E+ +LFV+NLNF T + L + F
Sbjct: 539 AIATNAVLPAPKVVSQTFSTSDTFKASEADENETPLETSTLFVRNLNFSTTNVRLAEVF- 597
Query: 638 EHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALIL 694
+G LS +VK + G+ +SMGFGF+EF + A + G LD H L++
Sbjct: 598 -QPLDG-FLSARVKTKPNPKRPGETLSMGFGFVEFRTSAQARAALATMNGYKLDQHELVI 655
Query: 695 QLCHAKKDEQVVKKAEKDKS-----STKLLVRNVAFEAQRK 730
+ H D ++ E + TK+L++N+ F+A +K
Sbjct: 656 KTSHKAMDAAEERRREDNAKKLAMRGTKILIKNLPFQATKK 696
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R+ F G++ ++ + D +R FAF F + +EAE A++
Sbjct: 682 TKILIKNLPFQATKKDIRNLFGAYGKLRSVRVPQKFDRTARGFAFADFISVREAENAMEA 741
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ E A
Sbjct: 742 LKHTHLLGRRLVLEFA 757
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V + + GF F +F SV A N
Sbjct: 684 ILIKNLPFQATKKDIRNLFGAY---GKLRSVRVPQKFDR---TARGFAFADFISVREAEN 737
Query: 678 VCRDLQGTILDGHALILQLC 697
L+ T L G L+L+
Sbjct: 738 AMEALKHTHLLGRRLVLEFA 757
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
L+KNLP+ +++ ++ +FG +G L V +P + + A F+ EA A + L
Sbjct: 684 ILIKNLPFQATKKDIRNLFGAYGKLRSVRVPQKFDRTARGFAFADFISVREAENAMEALK 743
Query: 552 YKRYKGVPLYLEWA 565
+ G L LE+A
Sbjct: 744 HTHLLGRRLVLEFA 757
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ ++ ++NLP+ AT+ ++R F +G + V V K + ++G A+ + A
Sbjct: 679 MRGTKILIKNLPFQATKKDIRNLFGAYGKLRSVR-VPQKFDRTARGFAFADFISVREAEN 737
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHN 388
A+E L ++ GR L + A + ++E+ N
Sbjct: 738 AMEALKHTHLLGRRLVLEFASEEAIDPEKEIRN 770
>gi|427792715|gb|JAA61809.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 841
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 177/460 (38%), Positives = 273/460 (59%), Gaps = 29/460 (6%)
Query: 280 DPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS 339
D GNP Q+ + ++GR+F+RNL YT TE+EL E F K+G + EVH+ +D+ T++
Sbjct: 287 DLGNP-------QETLADTGRIFIRNLSYTITEEELEELFKKYGPLEEVHLSIDRVTRKP 339
Query: 340 KGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQ 399
KG A+V + PE A RA LD + QGRLLH++PA+ KKS +++ +GT+
Sbjct: 340 KGFAFVSFLFPEHAIRAFTELDGQMLQGRLLHLLPAKAKKSEEQE------GEGTEAKSY 393
Query: 400 RREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND-LAVRIALGE 458
+ ++E + ++SG + WN+LF+ + + + +A ++ SK +LL E + +AVR+ALGE
Sbjct: 394 KDKKEEELKKSSGRSHNWNTLFLGANALADVMAERYATSKQELLGTETGESVAVRMALGE 453
Query: 459 TQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKF 518
TQV+AET++ L + GV L+ F+ T+ RS V LVKNLP + +L +FGKF
Sbjct: 454 TQVVAETREFLESNGV---VLDAFNRPATE---RSKTVILVKNLPAKTPPKDLHSVFGKF 507
Query: 519 GSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS-QSSTSK 577
G L +V+LP AL+ F +P EA AAF+ LAY ++K VPLYLEWAP+ V S + S K
Sbjct: 508 GILSRVVLPPWGVTALIEFQDPTEARAAFRRLAYSKFKHVPLYLEWAPTGVFSTEKSADK 567
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
+ + + + K A E + + + +LF+KNLNF T +E +R+HF
Sbjct: 568 SKTEGETKTKDTEQKHAEQPADEEEEAENEEEIPPEPDTTLFIKNLNFSTDEEAVREHF- 626
Query: 638 EHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL 696
E +++ KK KN G+ +SMG+GF++F + A + LQ + LDGHAL L+L
Sbjct: 627 EQCGPIHEVTIAKKKDTKNAGQLLSMGYGFVQFKQRKAAKQALKQLQHSKLDGHALELKL 686
Query: 697 CHAKKDEQVVKKAEKDKSS------TKLLVRNVAFEAQRK 730
++ V A++ K + TK+LVRN+ F+A +K
Sbjct: 687 STRATTKEEVAAAQRKKVTDIGKEGTKILVRNIPFQANQK 726
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 29 DAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPW 88
D +L TK+G R+FAF+GF+ E +A A +YFN SYLDT ++ EI +GD PR W
Sbjct: 1 DLQLKYTKEGVFRRFAFVGFKDEAQAAAAKEYFNNSYLDTSKLQVEICAALGDEQKPRSW 60
Query: 89 SRYS 92
S+YS
Sbjct: 61 SKYS 64
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPST-------KTLALVVFLEPVEAAAAFKGL 550
LV+N+P+ +++ E+ +F FG+L + LP + V FL +A AF+ L
Sbjct: 715 LVRNIPFQANQKEVQDLFSVFGTLRGIRLPRKMAAGGRHRGFGFVEFLTKNDAKRAFEAL 774
Query: 551 AYKRY-KGVPLYLEWAPSD 568
+ G L LEWA +D
Sbjct: 775 CQSTHLYGRRLVLEWASTD 793
>gi|12835985|dbj|BAB23448.1| unnamed protein product [Mus musculus]
Length = 590
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 175/472 (37%), Positives = 269/472 (56%), Gaps = 56/472 (11%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLFVRNL YT++E++L + FS +G +SE+H +D TK+ KG A+V + PE
Sbjct: 31 EEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPE 90
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A +D +FQGR+LHV+P+ KK + ++ + + G+ + K+++E KA+ +S
Sbjct: 91 HAVKAYAEVDGQVFQGRMLHVLPSTIKKEASQE----ANAPGS-SYKKKKEAMDKANSSS 145
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALT 470
+ WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E + L
Sbjct: 146 SHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETRGSVAVRVALGETQLVQEVRSFLI 203
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV + S + +A +RS V L KNLP + E+ + F +FGSL +V+LP
Sbjct: 204 DNGVCLDSFSQAAA------ERSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGG 257
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHD 590
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V + K +Q E
Sbjct: 258 ITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGVFGAAPQKKDSQH------EQP 311
Query: 591 AKRALLEQQLEGVTDADIDPDRVESR-------------------------SLFVKNLNF 625
A++A +EQ E V D + + VE +LF+KNLNF
Sbjct: 312 AEKAEVEQ--ETVLDPEGEKASVEGAEASTGKMEEEEEEEEEEEEESIPGCTLFIKNLNF 369
Query: 626 KTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQG 684
T +E L+ F K G I S + KK K G +SMGFGF+E+ E A + LQG
Sbjct: 370 STTEETLKGVFS---KVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQG 426
Query: 685 TILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEA-QRKI 731
+DGH L +++ + K+ K ++++K+LVRN+ F+A QR+I
Sbjct: 427 HTVDGHKLEVRISERATKPALTSTRKKQVPKKQTTSKILVRNIPFQANQREI 478
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ +++ E+ ++F FG L V LP T V F+ +A
Sbjct: 458 KQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDA 517
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 518 KKAFNALCHSTHLYGRRLVLEWADSEVTVQT 548
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P + +R+ FS GE+ +L + T G R F F+ F T+Q+A++A
Sbjct: 462 SKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAF 521
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 522 NALCHSTHLYGRRLVLEWA 540
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRS 339
P S+ K V ++ S ++ VRN+P+ A + E+RE FS FG + V + T
Sbjct: 445 PALTSTRKKQVPKKQTTS-KILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAH 503
Query: 340 KGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
+G +V + + A +A L +S GR L
Sbjct: 504 RGFGFVDFITKQDAKKAFNALCHSTHLYGRRL 535
>gi|296478475|tpg|DAA20590.1| TPA: RNA binding motif protein 19 [Bos taurus]
Length = 825
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 171/466 (36%), Positives = 264/466 (56%), Gaps = 48/466 (10%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLFVRNLPYT++E++L + FS++G VSE+H +D TK+ KG A+V + PE
Sbjct: 356 EEDLADSGRLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFVTFMFPE 415
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A +D +FQGR+LHV+P+ KK + + + ++ ++++E K S
Sbjct: 416 HAVKAYAEVDGQVFQGRMLHVLPSTIKKEASED------ANAPESSSYKKKKESKDKANS 469
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALT 470
++ WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++ L
Sbjct: 470 SSSHNWNTLFMGPNAVADAIAQKYSATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLL 529
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV + S + +A +RS V LVKNLP + EL + F +FGSL +V+LP
Sbjct: 530 DNGVCLDSFSQAAA------ERSKTVILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGG 583
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHD 590
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V S S + + DA
Sbjct: 584 ITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPMGVFS-SPIPQKEEPQDAPAEPAG 642
Query: 591 AKRALLEQQLEGVTDADIDP-DR-----------------------VESRSLFVKNLNFK 626
R +E + +G T P DR + +LF+KNLNF
Sbjct: 643 TDR--MEPETDGETPEGEQPTDRAAHDASAKMEEEEEEEEEEEEESLPGCTLFIKNLNFD 700
Query: 627 TCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGT 685
T +E L+ F K G + S + KK K G +SMGFGF+E+ E A + LQG
Sbjct: 701 TTEETLKGVFS---KVGAVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKALKQLQGH 757
Query: 686 ILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEA 727
++DGH L +++ + K+A + ++++K+LVRN+ F+A
Sbjct: 758 VVDGHKLEVRISERATKPALTSARKKQAPRKQTTSKILVRNIPFQA 803
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 122/229 (53%), Gaps = 19/229 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQTALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--------KEKEV--SEDEKNPVLAA 110
FNKS++DT RI+ E + GDP PR WS+++ K K+K+ +E +K+
Sbjct: 62 FNKSFIDTSRITVEFCKAFGDPTKPRAWSKHAQKSSQSKPPPKDKDAISTEPKKDDKKKK 121
Query: 111 KRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSE---NISQ 167
GE +EK+ DD + EFL V Q R + WAND L + K+K + N
Sbjct: 122 AAGE---LEKL--KDDNEFQEFLSVHQKRTQVATWANDALDAEPSKGKSKPANDYLNFDS 176
Query: 168 AIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRV 216
+ S++ + ++ K A EL SDMDY KS+V
Sbjct: 177 DSGQESEEEEDGENSEEEEDGLKPKEPKEPKAAVQKEL-SDMDYLKSKV 224
>gi|38707995|ref|NP_944597.1| probable RNA-binding protein 19 [Danio rerio]
gi|32450902|gb|AAP82506.1| nil per os [Danio rerio]
Length = 926
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 180/455 (39%), Positives = 260/455 (57%), Gaps = 49/455 (10%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
V ESGRLF+RN+PYT TE++L+E FSK G +SEV +D TK+ KG A+V Y IPE+A
Sbjct: 394 VAESGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAV 453
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT 414
A+ LD FQGR+LHVM +R KK Q + G+ + K+ +++ K ASG++
Sbjct: 454 SALAQLDGQTFQGRVLHVMASRLKKEKADQ---GPDAPGSSSYKR--KKDAKDKAASGSS 508
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN-DLAVRIALGETQVIAETKKALTNAG 473
WN+LF+ V + IA K+ +KS +LD E++ LAVR+ALGETQ++ ET++ L + G
Sbjct: 509 HNWNTLFLGTSAVADAIAEKYNTTKSQVLDHESDGSLAVRMALGETQIVQETRQFLLDNG 568
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
V++ S + S +RS V LVKNLP +L +F GSL +V+LP + A
Sbjct: 569 VSLDSFSQASG------ERSKCVILVKNLPSGVQVADLEALFSPHGSLGRVLLPPSGLTA 622
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTS--------KGNQKNDAV 585
+V FLEP EA AF LAY +++ VPLYLEWAP V + S K KND+V
Sbjct: 623 IVEFLEPTEAKRAFMKLAYTKFQHVPLYLEWAPVAVFTTPSAPRPEPQTKEKSAVKNDSV 682
Query: 586 VGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRI 645
E + + + Q+ + +LF+KNLNF T +E L+K F K G +
Sbjct: 683 QNEEEEEEEEEDDQI------------LPGSTLFIKNLNFITSEETLQKTFS---KCGVV 727
Query: 646 LSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHAL---------ILQ 695
S + KK K GK +SMG+GF+++ + E A R LQ +D H L L
Sbjct: 728 KSCTISKKRDKAGKLLSMGYGFVQYKTPEAAQKAMRQLQHCTVDEHQLEVKISEREVKLG 787
Query: 696 LCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ AK+ +Q +K ++++K+LVRN+ F+A K
Sbjct: 788 VAQAKRKKQTARK----QTTSKILVRNIPFQATVK 818
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 94/153 (61%), Gaps = 3/153 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F F+GF+TE++A++A+K+
Sbjct: 2 SRLIVKNLPNGMKEERFRKMFADFGTLTDCALKFTKDGKFRKFGFVGFKTEEDAQKALKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNKS++DT R++ E+ GDPN RPWS+++ + ++ +E++K K +K
Sbjct: 62 FNKSFVDTSRVTVELCTDFGDPNKARPWSKHTRQPSQKDTEEKKTHEQGEKEKKKPKKIL 121
Query: 121 VTEND---DPQLLEFLQVMQPRVKSKMWANDTL 150
D D EFL V Q R + WANDT+
Sbjct: 122 NVLGDLEKDESFQEFLAVHQKRGQVPTWANDTV 154
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 123/304 (40%), Gaps = 47/304 (15%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP +L FS G++ V + S A V + P A RA L
Sbjct: 586 ILVKNLPSGVQVADLEALFSPHGSLGRVLL------PPSGLTAIVEFLEPTEAKRAFMKL 639
Query: 361 DNSIFQGRLLHV------------MPARHKKSSDKQELHNSTSQGTKTLKQRREEERKAS 408
+ FQ L++ P ++ +K + N + Q + ++ E+++
Sbjct: 640 AYTKFQHVPLYLEWAPVAVFTTPSAPRPEPQTKEKSAVKNDSVQNEEEEEEEEEDDQILP 699
Query: 409 EASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKA 468
++ K N F+ + ++ K GV KS + ++ + +++G V +T +A
Sbjct: 700 GSTLFIKNLN--FITSEETLQKTFSKCGVVKSCTISKKRDKAGKLLSMGYGFVQYKTPEA 757
Query: 469 -------LTNAGVNVSSLE------EFSAG-------KTDGLKRSNHVFLVKNLPYDSSE 508
L + V+ LE E G K K++ LV+N+P+ ++
Sbjct: 758 AQKAMRQLQHCTVDEHQLEVKISEREVKLGVAQAKRKKQTARKQTTSKILVRNIPFQATV 817
Query: 509 GELAKMFGKFGSLDKVILP------STKTLALVVFLEPVEAAAAFKGLAYKRY-KGVPLY 561
EL ++F FG L V LP S + + FL +A AF L + + G L
Sbjct: 818 KELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKAFSALCHSTHLYGRRLV 877
Query: 562 LEWA 565
LEWA
Sbjct: 878 LEWA 881
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKS-RQFAFIGFRTEQEAEEAI 58
S+I V+N+P T LR+ F GE+ +L + G S R F FI F T+Q+A++A
Sbjct: 804 SKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKAF 862
>gi|392332679|ref|XP_003752658.1| PREDICTED: probable RNA-binding protein 19 [Rattus norvegicus]
Length = 846
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 243/783 (31%), Positives = 386/783 (49%), Gaps = 102/783 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + EDR R F+ G +TD L TK+GK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEDRFRQLFAAFGTLTDCSLKFTKEGKFRKFGFIGFKSEEEAQAALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSED---EKNPVLAAKRGEK 115
F++S++DT RI+ E + GDP+ PR WS+++ K + K+ S+D K+
Sbjct: 62 FHRSFIDTSRITVEFCKSFGDPSKPRAWSKHAQKPSQPKQPSQDSIPSDTKKDKKKKKVP 121
Query: 116 KTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
+EK+ E D + EFL + Q R + WAND L + KAK S +
Sbjct: 122 SDLEKLKE--DAEFQEFLSIHQKRTQVATWANDALEAELPKAKAKPSSDY---------- 169
Query: 176 ITLHVKSDKSNVITDSQATEKSKN------------AAADELMSDMDYFKSRVKKDWSDS 223
L+ SD SN + ++ E+ AA + +SDMDY KS++ + S
Sbjct: 170 --LNFDSD-SNSDSGQESEEEPAGEDGEEEQGLQPKAAVQKELSDMDYLKSKMVRAEVSS 226
Query: 224 ESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGN 283
E ED +D+ + E E EE + + + + + ++ + ++A G++ P +
Sbjct: 227 EDEDKEDSEDEAVNCEEGSEAEEEEGSPTCPAQQAGVNRGAVLGSLRPQEAAGKVEKPAS 286
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
Q+E + +R P+ TE + E + V+ + IV + ++ G
Sbjct: 287 --------QKEPTTPYTVKLRGAPFNVTEKNVLEFLAPLKPVA-IRIVRNAHGNKT-GYV 336
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS---QGTKTLKQR 400
+V + E +A++ + GR + V R K++S + S+S QG +TL +
Sbjct: 337 FVDLSSEEEVKKALKC-NREYMGGRYIEVF--REKQASAARGAPKSSSAPWQG-RTLGEH 392
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
EEE A SG N + + +E + +G L + +AVR+ALGETQ
Sbjct: 393 EEEEDLAD--SGRLFVRNLSYTSSEEDLEKLFSAYGTCGLRLETK--GSVAVRMALGETQ 448
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
++ E + L + GV + S + +A +RS V L KNLP + EL ++F +FGS
Sbjct: 449 LVQEVRSFLIDNGVCLDSFSQAAA------ERSKTVILAKNLPAGTLAAELQEIFSRFGS 502
Query: 521 LDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQ 580
L +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V + K +Q
Sbjct: 503 LGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGVFGAAPQKKDSQ 562
Query: 581 KNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESR------------------------ 616
E A++A EQ E V + + + VE
Sbjct: 563 P------EQPAQKAEAEQ--ETVLNPEGEKALVEGAEASMGKMEEEEEEEEEEEEEESIP 614
Query: 617 --SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVE 673
+LF+KNLNF T +E L++ F + G + S + KK K G +SMGFGF+E+ E
Sbjct: 615 GCTLFIKNLNFNTTEETLKEVFS---RVGAVKSCTISKKKSKAGVLLSMGFGFVEYKKPE 671
Query: 674 TATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEA-Q 728
A + LQG I+DGH L +++ + K+ K ++++K+LVRN+ F+A Q
Sbjct: 672 QAQKALKRLQGHIVDGHKLEVRISERATKPALTSTRKKQVPKKQTTSKILVRNIPFQANQ 731
Query: 729 RKI 731
R+I
Sbjct: 732 REI 734
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ +++ E+ ++F FG L V LP T V F+ +A
Sbjct: 714 KQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDA 773
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 774 KKAFNALCHSTHLYGRRLVLEWADSEVTVQA 804
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P + +R+ FS GE+ +L + T G R F F+ F T+Q+A++A
Sbjct: 718 SKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAF 777
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRS 339
P S+ K V ++ S ++ VRN+P+ A + E+RE FS FG + V + T
Sbjct: 701 PALTSTRKKQVPKKQTTS-KILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAH 759
Query: 340 KGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
+G +V + + A +A L +S GR L
Sbjct: 760 RGFGFVDFITKQDAKKAFNALCHSTHLYGRRL 791
>gi|190337757|gb|AAI63877.1| RNA binding motif protein 19 [Danio rerio]
Length = 926
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 179/455 (39%), Positives = 261/455 (57%), Gaps = 49/455 (10%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
V ESGRLF+RN+PYT TE++L+E FSK G +SEV +D TK+ KG A+V Y IPE+A
Sbjct: 394 VAESGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAV 453
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT 414
A+ LD FQGR+LHVM +R KK Q + G+ + K+ +++ K ASG++
Sbjct: 454 SALAQLDGHTFQGRVLHVMASRLKKEKADQ---GPDAPGSSSYKR--KKDAKDKAASGSS 508
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN-DLAVRIALGETQVIAETKKALTNAG 473
WN+LF+ V + IA K+ +KS +LD E++ LAVR+ALGETQ++ ET++ L + G
Sbjct: 509 HNWNTLFLGTSAVADAIAEKYNTTKSQVLDHESDGSLAVRMALGETQIVQETRQFLLDNG 568
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
V++ S + S +RS V LVKNLP +L +F GSL +V+LP + A
Sbjct: 569 VSLDSFSQASG------ERSKCVILVKNLPSGVQVADLEALFSPHGSLGRVLLPPSGLTA 622
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTS--------KGNQKNDAV 585
+V FLEP EA AF LAY +++ VPLYLEWAP V + S K KND+V
Sbjct: 623 IVEFLEPTEAKRAFMKLAYTKFQHVPLYLEWAPVAVFTTPSAPRPEPQTKEKSAVKNDSV 682
Query: 586 VGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRI 645
E + + + Q+ + +LF+KNLNF T +E L+K F K G +
Sbjct: 683 QNEEEEEEEEEDDQI------------LPGSTLFIKNLNFITSEETLQKTFS---KCGVV 727
Query: 646 LSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL-------- 696
S + KK K GK +SMG+GF+++ + E A R LQ +D H L +++
Sbjct: 728 KSCTISKKRDKAGKLLSMGYGFVQYKTPEAAQKAMRQLQHCTVDEHQLEVKISEREVKSG 787
Query: 697 -CHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
AK+ +Q +K ++++K+LVRN+ F+A K
Sbjct: 788 VAQAKRKKQTARK----QTTSKILVRNIPFQATVK 818
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 94/153 (61%), Gaps = 3/153 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + EDR R F+ G +TD L TKDGK R+F F+GF+TE++A++A+K+
Sbjct: 2 SRLIVKNLPNGMKEDRFRKMFADFGTLTDCALKFTKDGKFRKFGFVGFKTEEDAQKALKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNKS++DT R++ E+ GDPN RPWS+++ + K+ +E++K K +K
Sbjct: 62 FNKSFVDTSRVTVELCTDFGDPNKARPWSKHTRQPSKKDTEEKKTHEQGEKEKKKPKKIL 121
Query: 121 VTEND---DPQLLEFLQVMQPRVKSKMWANDTL 150
D D EFL V Q R + WANDT+
Sbjct: 122 NVLGDLEKDESFQEFLAVHQKRGQVPTWANDTV 154
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 124/304 (40%), Gaps = 47/304 (15%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP +L FS G++ V + S A V + P A RA L
Sbjct: 586 ILVKNLPSGVQVADLEALFSPHGSLGRVLL------PPSGLTAIVEFLEPTEAKRAFMKL 639
Query: 361 DNSIFQGRLLHV------------MPARHKKSSDKQELHNSTSQGTKTLKQRREEERKAS 408
+ FQ L++ P ++ +K + N + Q + ++ E+++
Sbjct: 640 AYTKFQHVPLYLEWAPVAVFTTPSAPRPEPQTKEKSAVKNDSVQNEEEEEEEEEDDQILP 699
Query: 409 EASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKA 468
++ K N F+ + ++ K GV KS + ++ + +++G V +T +A
Sbjct: 700 GSTLFIKNLN--FITSEETLQKTFSKCGVVKSCTISKKRDKAGKLLSMGYGFVQYKTPEA 757
Query: 469 -------LTNAGVNVSSLE------EFSAG-------KTDGLKRSNHVFLVKNLPYDSSE 508
L + V+ LE E +G K K++ LV+N+P+ ++
Sbjct: 758 AQKAMRQLQHCTVDEHQLEVKISEREVKSGVAQAKRKKQTARKQTTSKILVRNIPFQATV 817
Query: 509 GELAKMFGKFGSLDKVILP------STKTLALVVFLEPVEAAAAFKGLAYKRY-KGVPLY 561
EL ++F FG L V LP S + + FL +A AF L + + G L
Sbjct: 818 KELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKAFSALCHSTHLYGRRLV 877
Query: 562 LEWA 565
LEWA
Sbjct: 878 LEWA 881
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKS-RQFAFIGFRTEQEAEEAI 58
S+I V+N+P T LR+ F GE+ +L + G S R F FI F T+Q+A++A
Sbjct: 804 SKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKAF 862
>gi|301779826|ref|XP_002925333.1| PREDICTED: probable RNA-binding protein 19-like [Ailuropoda
melanoleuca]
Length = 963
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 180/477 (37%), Positives = 273/477 (57%), Gaps = 60/477 (12%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +S+K Q L +SGRLF+RNLPYT+TE++L + FSKFG +SE+H
Sbjct: 377 GPPKNSAKPWQGRTLGENEEEEDLADSGRLFIRNLPYTSTEEDLEQLFSKFGPLSELHYP 436
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A+V + PE A RA +D +FQGR+LHV+P+ KK + + ++ +
Sbjct: 437 IDSLTKKPKGFAFVTFMFPEHAVRAYAEVDGQVFQGRMLHVLPSTIKKEASE----DTDT 492
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ +S + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 493 PGSSSYKKKKESKDKANSSSSHN--WNTLFMGPNAVADAIAQKYSATKSQVFDHETKGSV 550
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 551 AVRVALGETQLVQEVRRFLLDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAE 604
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L + FG+FGSL +V+LP A+V F+EP+EA AF+ LAY ++ PLYLEWAP V
Sbjct: 605 LQETFGRFGSLGRVLLPEGGVTAIVEFVEPLEARKAFRHLAYSKFHHAPLYLEWAPVGVF 664
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLE-----QQLEGVTDADIDPDRVESR--------- 616
S SS + + D G RA E + EG A+ + ++
Sbjct: 665 S-SSAPQTKEPKDPPAGPAGEDRAEPETLPDHETPEGEKPAEGGAENCPAKVEEEEEEEE 723
Query: 617 -----SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFD 670
+LF+KNLNF T +E L++ F K G + S + KK K G +SMGFGF+E+
Sbjct: 724 SLPGCALFIKNLNFNTTEETLKEVFS---KVGTVRSCSISKKKNKAGAMLSMGFGFVEYR 780
Query: 671 SVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
E A + LQ + L A+K +QV++K ++++K+LVRN+ F+A
Sbjct: 781 KPEQAQKALKQLQ--------VRPALTSARK-KQVLRK----QTTSKILVRNIPFQA 824
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 199/429 (46%), Gaps = 57/429 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGFR+E+EA A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFRSEEEARTALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FN+S++DT RI+ E + GDP PR WSR++ K + K S+D K+ V + + +T
Sbjct: 62 FNRSFIDTSRITVEFCKSFGDPTKPRAWSRHAQKISQSKNPSKD-KDSVPTEPKKDDRTR 120
Query: 118 -----IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGG 172
+EK+ E D + EFL V Q R ++ WAND L + K+K + +
Sbjct: 121 KVAGELEKLKE--DTEFREFLSVHQKRTQTATWANDVLDAEPSKGKSKAANDY------- 171
Query: 173 EKSITLHVKSDKSNVITDSQATE-------KSKNAAADELMSDMDYFKSRVKKDWSDSES 225
L+ SD + A E + AA +SDMDY KS++ K S S S
Sbjct: 172 -----LNFDSDSGQESDEEGAGEDPEEEDGRKPRAAVQRELSDMDYLKSKMVKSESPSSS 226
Query: 226 EDDSAGDDD---DDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPG 282
E++ + D+ D G EEE +D G G E V G
Sbjct: 227 EEEESEDEAVSCGDGSGAEEEAPSP----------APAQQDRGRPGAGPEQG----VPSG 272
Query: 283 N--PSSSSKDV-----QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKD 335
N P ++ + Q+E + +R P+ TE + E + V+ + IV +
Sbjct: 273 NETPGTARAEADKAAHQKEPTTPYTVKLRGAPFNVTEKSVTEFLAPLRPVA-IRIVRNAH 331
Query: 336 TKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTK 395
++ G +V ++ E +A++ GR + V ++ ++ +++ +
Sbjct: 332 GNKT-GYIFVDFSSEEEVKQALKC-HREYMGGRYIEVFREKNVTTAKGPPKNSAKPWQGR 389
Query: 396 TLKQRREEE 404
TL + EEE
Sbjct: 390 TLGENEEEE 398
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 124/318 (38%), Gaps = 54/318 (16%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP EL+E F +FG++ V + T A V + P A +A L
Sbjct: 591 ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEFVEPLEARKAFRHL 644
Query: 361 DNSIFQGRLLHV--MPARHKKSSDKQELHNSTSQGTKTLKQRREEE-----------RKA 407
S F L++ P SS Q + R E E + A
Sbjct: 645 AYSKFHHAPLYLEWAPVGVFSSSAPQTKEPKDPPAGPAGEDRAEPETLPDHETPEGEKPA 704
Query: 408 SEASGNTKA-------------WNSLFMR------PDTVVENIARKHGVSKSDLLDREAN 448
+ N A +LF++ + ++ + K G +S + ++ N
Sbjct: 705 EGGAENCPAKVEEEEEEEESLPGCALFIKNLNFNTTEETLKEVFSKVGTVRSCSISKKKN 764
Query: 449 DLAVRIALG----ETQVIAETKKALTNAGVNVSSLEEFSAGKTDGL-KRSNHVFLVKNLP 503
+++G E + + +KAL V + SA K L K++ LV+N+P
Sbjct: 765 KAGAMLSMGFGFVEYRKPEQAQKALKQLQVRPALT---SARKKQVLRKQTTSKILVRNIP 821
Query: 504 YDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEAAAAFKGLAYKRY- 555
+ + E+ ++F FG L V LP T V FL +A AF+ L + +
Sbjct: 822 FQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFQALCHSTHL 881
Query: 556 KGVPLYLEWAPSDVLSQS 573
G L LEWA S+V Q+
Sbjct: 882 YGRRLVLEWADSEVSLQT 899
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTK 337
V P S+ K V ++ S ++ VRN+P+ A E+RE FS FG + V + T
Sbjct: 794 VRPALTSARKKQVLRKQTTS-KILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTG 852
Query: 338 RSKGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
+G +V + + A RA + L +S GR L
Sbjct: 853 THRGFGFVDFLTKQDAKRAFQALCHSTHLYGRRL 886
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 813 SKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 872
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ + ++L R+ E A
Sbjct: 873 QALCHSTHLYGRRLVLEWA 891
>gi|114051910|ref|NP_001039420.1| probable RNA-binding protein 19 [Bos taurus]
gi|88954099|gb|AAI14030.1| RNA binding motif protein 19 [Bos taurus]
Length = 920
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 171/466 (36%), Positives = 264/466 (56%), Gaps = 48/466 (10%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLFVRNLPYT++E++L + FS++G VSE+H +D TK+ KG A+V + PE
Sbjct: 356 EEDLADSGRLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFVTFMFPE 415
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A +D +FQGR+LHV+P+ KK + + + ++ ++++E K S
Sbjct: 416 HAVKAYAEVDGQVFQGRMLHVLPSTIKKEASED------ANAPESSSYKKKKESKDKANS 469
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALT 470
++ WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++ L
Sbjct: 470 SSSHNWNTLFMGPNAVADAIAQKYSATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLL 529
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV + S + +A +RS V LVKNLP + EL + F +FGSL +V+LP
Sbjct: 530 DNGVCLDSFSQAAA------ERSKTVILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGG 583
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHD 590
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V S S + + DA
Sbjct: 584 ITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPMGVFS-SPIPQKEEPQDAPAEPAG 642
Query: 591 AKRALLEQQLEGVTDADIDP-DR-----------------------VESRSLFVKNLNFK 626
R +E + +G T P DR + +LF+KNLNF
Sbjct: 643 TDR--MEPETDGETPEGEQPTDRAAHDASAKMEEEEEEEEEEEEESLPGCTLFIKNLNFD 700
Query: 627 TCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGT 685
T +E L+ F K G + S + KK K G +SMGFGF+E+ E A + LQG
Sbjct: 701 TTEETLKGVFS---KVGAVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKALKQLQGH 757
Query: 686 ILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEA 727
++DGH L +++ + K+A + ++++K+LVRN+ F+A
Sbjct: 758 VVDGHKLEVRISERATKPALTSARKKQAPRKQTTSKILVRNIPFQA 803
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 122/229 (53%), Gaps = 19/229 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQTALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--------KEKEV--SEDEKNPVLAA 110
FNKS++DT RI+ E + GDP PR WS+++ K K+K+ +E +K+
Sbjct: 62 FNKSFIDTSRITVEFCKAFGDPTKPRAWSKHAQKSSQSKPPPKDKDAISTEPKKDDKKKK 121
Query: 111 KRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSE---NISQ 167
GE +EK+ DD + EFL V Q R + WAND L + K+K + N
Sbjct: 122 AAGE---LEKL--KDDNEFQEFLSVHQKRTQVATWANDALDAEPSKGKSKPANDYLNFDS 176
Query: 168 AIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRV 216
+ S++ + ++ K A EL SDMDY KS+V
Sbjct: 177 DSGQESEEEEDGENSEEEEDGLKPKEPKEPKAAVQKEL-SDMDYLKSKV 224
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP T V FL +A
Sbjct: 788 KQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGTHRGFGFVDFLTKQDA 847
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDV 569
AF L + + G L LEWA S+V
Sbjct: 848 KRAFNALCHSTHLYGRRLVLEWADSEV 874
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 792 SKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGTHRGFGFVDFLTKQDAKRAF 851
>gi|321476727|gb|EFX87687.1| hypothetical protein DAPPUDRAFT_306569 [Daphnia pulex]
Length = 845
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 172/461 (37%), Positives = 269/461 (58%), Gaps = 46/461 (9%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++ V ESGR+F+RNL YTATE+++ FS++G ++E H+ +DK +++ KG A+V Y IPE
Sbjct: 306 EETVAESGRIFIRNLAYTATEEDIEALFSRYGPLAETHLPIDKHSRKIKGFAFVTYVIPE 365
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A RA LD + FQGR+LH++ + K + D ++ +GT K++ +E + + ++
Sbjct: 366 HAVRAYTALDGTAFQGRMLHLIAGKPKATDD----DDADGEGTSYKKKKLKELKNKAASA 421
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLL----DREANDLAVRIALGETQVIAETKK 467
N WN+LF+ + V +A ++ +K +L D + +AVR+ALGETQ++AETK+
Sbjct: 422 HN---WNTLFLGTNAVATLMAERYSTTKQQVLLEGGDGQQQSVAVRLALGETQLVAETKQ 478
Query: 468 ALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP 527
L G+++ + ++ A K +RS V LVKNL S+ EL +F FG L +V+LP
Sbjct: 479 FLVENGIHLDAFQD--APK----QRSKTVMLVKNLDAQSNVDELRDLFSPFGELGRVLLP 532
Query: 528 STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL--------SQSSTSKGN 579
A+V FLEP EA AAF+ LAY +++ +PLYLEWAP DV S+ S +K
Sbjct: 533 PRGVTAIVEFLEPTEAKAAFRKLAYSKFRHMPLYLEWAPMDVFRTAAQRVESKPSENKTK 592
Query: 580 QKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEH 639
K+ + V + +L ++E + D ++FVKN+NF T D+++RKHF
Sbjct: 593 VKDASAVATLEENNPILSDKVEEQPEQDT--------TIFVKNVNFATTDQSMRKHFESC 644
Query: 640 IKEGRILSVKV--KKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL 696
G I S V KK KN G+ +SMG+GF++F S + ++LQ + LDGH + L+
Sbjct: 645 ---GPIFSATVARKKDPKNPGQFLSMGYGFVQFLSKKATVTALKELQNSTLDGHTIELKR 701
Query: 697 CH--AKKDEQVVK-----KAEKDKSSTKLLVRNVAFEAQRK 730
+ K+E ++ K+ S+KLLVRN+ FEA K
Sbjct: 702 SNRTENKEETIITARKTLSTSKEPISSKLLVRNIPFEATTK 742
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 92/168 (54%), Gaps = 11/168 (6%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+RI VKNLP V+ +L++ FSQKG++TD +L KDGK R F F+GF+ + EA+ A+ Y
Sbjct: 2 TRIIVKNLPPSVSAQKLKETFSQKGQVTDVQLKYDKDGKFRHFGFVGFKNDDEADSALSY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FN +++ +C+I E +G+ + + K K+ E P+L K K
Sbjct: 62 FNNTFVGSCKIQVERCVNLGESS--------KMSKGKKAPEAIPVPLLTQKVNPVKGDTN 113
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQA 168
T +DP+ EF ++ K K+W ND + G + QK +E+ S A
Sbjct: 114 KTP-EDPEFAEFREIHSHNQKDKIWDNDGIDGSV--QKPISNEDASDA 158
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 128/328 (39%), Gaps = 80/328 (24%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI-AYVLYAIPESASRAIEV 359
+ V+NL + DELR+ FS FG + V + +G+ A V + P A A
Sbjct: 502 MLVKNLDAQSNVDELRDLFSPFGELGRVLLP-------PRGVTAIVEFLEPTEAKAAFRK 554
Query: 360 LDNSIFQGRLLHVMPA------------RHKKSSDKQELHNSTSQGT-----KTLKQRRE 402
L S F+ L++ A K S +K ++ ++++ T L + E
Sbjct: 555 LAYSKFRHMPLYLEWAPMDVFRTAAQRVESKPSENKTKVKDASAVATLEENNPILSDKVE 614
Query: 403 EERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD------REANDLAVRIAL 456
E+ E N F D + RKH S + ++ + +++
Sbjct: 615 EQ---PEQDTTIFVKNVNFATTDQSM----RKHFESCGPIFSATVARKKDPKNPGQFLSM 667
Query: 457 GETQVIAETKKALTNAGVNVSSLEEFSAGKTDG----LKRSNHV---------------- 496
G V +KKA V++L+E DG LKRSN
Sbjct: 668 GYGFVQFLSKKA------TVTALKELQNSTLDGHTIELKRSNRTENKEETIITARKTLST 721
Query: 497 --------FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPV 541
LV+N+P++++ E+ ++F FG L V LP S + A + F+
Sbjct: 722 SKEPISSKLLVRNIPFEATTKEVTELFKPFGELKAVRLPKKMAGNQSHRGFAFIDFITKQ 781
Query: 542 EAAAAFKGL-AYKRYKGVPLYLEWAPSD 568
+A AF+ L A G L LEWA S+
Sbjct: 782 DAKRAFESLSASTHLYGRRLVLEWAASE 809
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS-KGIAYVLYAIPESASRA 356
S +L VRN+P+ AT E+ E F FG + V + +S +G A++ + + A RA
Sbjct: 727 SSKLLVRNIPFEATTKEVTELFKPFGELKAVRLPKKMAGNQSHRGFAFIDFITKQDAKRA 786
Query: 357 IEVLDNSI-FQGRLL 370
E L S GR L
Sbjct: 787 FESLSASTHLYGRRL 801
>gi|281343470|gb|EFB19054.1| hypothetical protein PANDA_014807 [Ailuropoda melanoleuca]
Length = 947
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 183/487 (37%), Positives = 276/487 (56%), Gaps = 62/487 (12%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +S+K Q L +SGRLF+RNLPYT+TE++L + FSKFG +SE+H
Sbjct: 365 GPPKNSAKPWQGRTLGENEEEEDLADSGRLFIRNLPYTSTEEDLEQLFSKFGPLSELHYP 424
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A+V + PE A RA +D +FQGR+LHV+P+ KK + + ++ +
Sbjct: 425 IDSLTKKPKGFAFVTFMFPEHAVRAYAEVDGQVFQGRMLHVLPSTIKKEASE----DTDT 480
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ +S + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 481 PGSSSYKKKKESKDKANSSSSHN--WNTLFMGPNAVADAIAQKYSATKSQVFDHETKGSV 538
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 539 AVRVALGETQLVQEVRRFLLDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAE 592
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L + FG+FGSL +V+LP A+V F+EP+EA AF+ LAY ++ PLYLEWAP V
Sbjct: 593 LQETFGRFGSLGRVLLPEGGVTAIVEFVEPLEARKAFRHLAYSKFHHAPLYLEWAPVGVF 652
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLE-----QQLEGVTDADIDPDRVESR--------- 616
S SS + + D G RA E + EG A+ + ++
Sbjct: 653 S-SSAPQTKEPKDPPAGPAGEDRAEPETLPDHETPEGEKPAEGGAENCPAKVEEEEEEEE 711
Query: 617 -----SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFD 670
+LF+KNLNF T +E L++ F K G + S + KK K G +SMGFGF+E+
Sbjct: 712 SLPGCALFIKNLNFNTTEETLKEVFS---KVGTVRSCSISKKKNKAGAMLSMGFGFVEYR 768
Query: 671 SVETATNVCRDLQGTILDGHAL-----ILQ-----LCHAKKDEQVVKKAEKDKSSTKLLV 720
E A + LQ + L LQ L A+K +QV++K ++++K+LV
Sbjct: 769 KPEQAQKALKQLQVRAAVAYTLNNLNSFLQPSRPALTSARK-KQVLRK----QTTSKILV 823
Query: 721 RNVAFEA 727
RN+ F+A
Sbjct: 824 RNIPFQA 830
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 190/416 (45%), Gaps = 57/416 (13%)
Query: 14 EDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRISC 73
E+R R F+ G +TD L TKDGK R+F FIGFR+E+EA A+ +FN+S++DT RI+
Sbjct: 3 EERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFRSEEEARTALNHFNRSFIDTSRITV 62
Query: 74 EIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT------IEKVTEND 125
E + GDP PR WSR++ K + K S+D K+ V + ++T +EK+ E
Sbjct: 63 EFCKSFGDPTKPRAWSRHAQKISQSKNPSKD-KDSVPTEPKKVRRTRKVAGELEKLKE-- 119
Query: 126 DPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLHVKSDKS 185
D + EFL V Q R ++ WAND L + K+K + + L+ SD
Sbjct: 120 DTEFREFLSVHQKRTQTATWANDVLDAEPSKGKSKAANDY------------LNFDSDSG 167
Query: 186 NVITDSQATE-------KSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDD---D 235
+ A E + AA +SDMDY KS++ K S S SE++ + D+
Sbjct: 168 QESDEEGAGEDPEEEDGRKPRAAVQRELSDMDYLKSKMVKSESPSSSEEEESEDEAVSCG 227
Query: 236 DDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGN--PSSSSKDV-- 291
D G EEE +D G G E V GN P ++ +
Sbjct: 228 DGSGAEEEAPSP----------APAQQDRGRPGAGPEQG----VPSGNETPGTARAEADK 273
Query: 292 ---QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYA 348
Q+E + +R P+ TE + E + V+ + IV + ++ G +V ++
Sbjct: 274 AAHQKEPTTPYTVKLRGAPFNVTEKSVTEFLAPLRPVA-IRIVRNAHGNKT-GYIFVDFS 331
Query: 349 IPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEE 404
E +A++ GR + V ++ ++ +++ +TL + EEE
Sbjct: 332 SEEEVKQALKC-HREYMGGRYIEVFREKNVTTAKGPPKNSAKPWQGRTLGENEEEE 386
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 128/333 (38%), Gaps = 66/333 (19%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP EL+E F +FG++ V + T A V + P A +A L
Sbjct: 579 ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEFVEPLEARKAFRHL 632
Query: 361 DNSIFQGRLLHV--MPARHKKSSDKQELHNSTSQGTKTLKQRREEE-----------RKA 407
S F L++ P SS Q + R E E + A
Sbjct: 633 AYSKFHHAPLYLEWAPVGVFSSSAPQTKEPKDPPAGPAGEDRAEPETLPDHETPEGEKPA 692
Query: 408 SEASGNTKA-------------WNSLFMR------PDTVVENIARKHGVSKSDLLDREAN 448
+ N A +LF++ + ++ + K G +S + ++ N
Sbjct: 693 EGGAENCPAKVEEEEEEEESLPGCALFIKNLNFNTTEETLKEVFSKVGTVRSCSISKKKN 752
Query: 449 DLAVRIALG----ETQVIAETKKALTNAGV------NVSSLEEF---------SAGKTDG 489
+++G E + + +KAL V +++L F SA K
Sbjct: 753 KAGAMLSMGFGFVEYRKPEQAQKALKQLQVRAAVAYTLNNLNSFLQPSRPALTSARKKQV 812
Query: 490 L-KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPV 541
L K++ LV+N+P+ + E+ ++F FG L V LP T V FL
Sbjct: 813 LRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQ 872
Query: 542 EAAAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
+A AF+ L + + G L LEWA S+V Q+
Sbjct: 873 DAKRAFQALCHSTHLYGRRLVLEWADSEVSLQT 905
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 278 IVDPGNPSSSSKDVQQEVLE--SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-K 334
+ P P+ +S +Q + + + ++ VRN+P+ A E+RE FS FG + V +
Sbjct: 796 FLQPSRPALTSARKKQVLRKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMT 855
Query: 335 DTKRSKGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
T +G +V + + A RA + L +S GR L
Sbjct: 856 GTGTHRGFGFVDFLTKQDAKRAFQALCHSTHLYGRRL 892
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 819 SKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 878
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ + ++L R+ E A
Sbjct: 879 QALCHSTHLYGRRLVLEWA 897
>gi|312374833|gb|EFR22311.1| hypothetical protein AND_15450 [Anopheles darlingi]
Length = 867
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 233/754 (30%), Positives = 367/754 (48%), Gaps = 73/754 (9%)
Query: 21 FSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVG 80
FS G ITD +L T +GK R F FIGF E++A +AIK+FN +++ T +IS +G
Sbjct: 6 FSTCGIITDVQLKYTPEGKFRNFGFIGFENEEQAAKAIKHFNNTFIRTSKISVAPCVALG 65
Query: 81 DPNMPRPWSRYSLK------KEKEVSEDEK-NPVLAAKRGEK------KTIEKVTENDDP 127
+ + WS+++ K + S DE N +A +GEK KTI + +ND P
Sbjct: 66 ETKNLKIWSKHAQKPVPGSDENGSKSADENDNTEFSAGKGEKPKAPTAKTILERHQND-P 124
Query: 128 QLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGG--------EKSITLH 179
+ EFL+ + R +W N + ++ S A G EKS
Sbjct: 125 KFQEFLEAHK-RAGKLVWDNQ----FQQSEAESTTKTPSVAASSGDESTGGKFEKSTGKK 179
Query: 180 VKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDG 239
VKS + + K +N A DM F K ++ +
Sbjct: 180 VKSAEPKKPAITLFVAKVRNLPATTKRQDMLRFFKTAKPYSVRIPPKNKGFAYVGFKTEI 239
Query: 240 EEEEEEENDHNGDSNEECDSI-IKDSIHSGVGEEDANGEI-VDPGNPSSSSKDVQQE-VL 296
E E+ D + ++ + D + ED NGE +V E +
Sbjct: 240 ELEKALLMDKSFLGGKQVRIVNFTDQNNRAASGEDKNGERRAKQAKWERQRVNVPSESIC 299
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
ESG+LF RNL Y+ E +LRE F K+G V EV + +D +T++ KG V + +PE A A
Sbjct: 300 ESGKLFFRNLAYSVKEQDLREIFEKYGPVVEVDVPIDSNTRKLKGFGTVTFLMPEHAVMA 359
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREE-ERKASEASGNTK 415
L+ + QGR+ H++PA K D +E N G K+++E+ ++K +++S N
Sbjct: 360 YSELNGTFLQGRMFHILPA--KVDEDMKEGEN----GDSNFKRKKEQTQKKQAQSSHN-- 411
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLL--DREANDLAVRIALGETQVIAETKKALTNAG 473
WN+LFM + V +A+K+G SK +L + AVR+ALGET+V+ E + L + G
Sbjct: 412 -WNTLFMGENAVAVAMAKKYGTSKDAILMSTEGSTSAAVRLALGETEVVLEMQSFLQDNG 470
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
+ +++ + KRS+ + LVKNL + ++ L +MF KFG L +V+LP + A
Sbjct: 471 IQLNAFD------APNPKRSSTLILVKNLAPNCTKEALREMFEKFGILGRVVLPPSGVTA 524
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST----------SKGNQKND 583
+V FL+P EA AFK LAY ++ PLYLEWAP + + S GN
Sbjct: 525 IVEFLDPSEARRAFKKLAYTNFQSQPLYLEWAPENTFKSPTAPDDVKEVKEESNGNSTVK 584
Query: 584 AVVGEHDAKRAL---LEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHI 640
E + A + ++ E + D +P+ E +LF+KNL+FKT + +++ F
Sbjct: 585 ESPDEETVRAAAGTNVPKKEEEPLEDDTEPE--EGTTLFIKNLSFKTVEATIQERFR--- 639
Query: 641 KEGRILSVKV---KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALIL--- 694
K G I SV++ K + G S G+GFI+F ++A + ++LQ +DG + L
Sbjct: 640 KVGPIHSVQIVRTKNLVSGGPTESRGYGFIQFKHRKSADHALKNLQLVQIDGRPIELARS 699
Query: 695 -QLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
++ DE KA ++ +K+LVRN+ F+A
Sbjct: 700 DRVLKTAADEARKSKAGPKQTGSKILVRNIPFQA 733
>gi|49619013|gb|AAT68091.1| KIAA0682-like [Danio rerio]
Length = 927
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 179/455 (39%), Positives = 261/455 (57%), Gaps = 49/455 (10%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
V ESGRLF+RN+PYT TE++L+E FSK G +SEV +D TK+ KG A+V Y IPE+A
Sbjct: 395 VAESGRLFIRNMPYTCTEEDLKELFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAV 454
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT 414
A+ LD FQGR+LHVM +R KK Q + G+ + K+ +++ K ASG++
Sbjct: 455 SALAQLDGHTFQGRVLHVMASRLKKEKADQ---GPDAPGSSSYKR--KKDAKDKAASGSS 509
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN-DLAVRIALGETQVIAETKKALTNAG 473
WN+LF+ V + IA K+ +KS +LD E++ LAVR+ALGETQ++ ET++ L + G
Sbjct: 510 HNWNTLFLGTSAVADAIAEKYNTTKSQVLDHESDGSLAVRMALGETQIVQETRQFLLDNG 569
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
V++ S + S +RS V LVKNLP +L +F GSL +V+LP + A
Sbjct: 570 VSLDSFSQASG------ERSKCVILVKNLPSGVQVADLEALFSPHGSLGRVLLPPSGLTA 623
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTS--------KGNQKNDAV 585
+V FLEP EA AF LAY +++ VPLYLEWAP V + S K KND+V
Sbjct: 624 IVEFLEPTEAKRAFMKLAYTKFQHVPLYLEWAPVAVFTTPSAPRPEPQTKEKSAVKNDSV 683
Query: 586 VGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRI 645
E + + + Q+ + +LF+KNLNF T +E L+K F K G +
Sbjct: 684 QNEEEEEEEEEDDQI------------LPGSTLFIKNLNFITSEETLQKTFS---KCGVV 728
Query: 646 LSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL-------- 696
S + KK K GK +SMG+GF+++ + E A R LQ +D H L +++
Sbjct: 729 KSCTISKKRDKAGKLLSMGYGFVQYKTPEAAQKAMRQLQHCTVDEHQLEVKISEREVKSG 788
Query: 697 -CHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
AK+ +Q +K ++++K+LVRN+ F+A K
Sbjct: 789 VAQAKRKKQTARK----QTTSKILVRNIPFQATVK 819
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 96/154 (62%), Gaps = 4/154 (2%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + EDR R F+ G +TD L TKDGK R+F F+GF+TE++A++A+K+
Sbjct: 2 SRLIVKNLPNGMKEDRFRKMFADFGTLTDCALKFTKDGKFRKFGFVGFKTEEDAQKALKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKTI 118
FNKS++DT R++ E+ GDPN RPWS+++ + +K+ E + + ++ + K I
Sbjct: 62 FNKSFVDTSRVTVELCTDFGDPNKARPWSKHTRQPSSKKDTEEKKTHEQGEKEKKKPKKI 121
Query: 119 EKVTEN--DDPQLLEFLQVMQPRVKSKMWANDTL 150
V + D EFL V Q R + WANDT+
Sbjct: 122 LNVLGDLEKDESFQEFLAVHQKRGQVPTWANDTV 155
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 124/304 (40%), Gaps = 47/304 (15%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP +L FS G++ V + T A V + P A RA L
Sbjct: 587 ILVKNLPSGVQVADLEALFSPHGSLGRVLLPPSGLT------AIVEFLEPTEAKRAFMKL 640
Query: 361 DNSIFQGRLLHV------------MPARHKKSSDKQELHNSTSQGTKTLKQRREEERKAS 408
+ FQ L++ P ++ +K + N + Q + ++ E+++
Sbjct: 641 AYTKFQHVPLYLEWAPVAVFTTPSAPRPEPQTKEKSAVKNDSVQNEEEEEEEEEDDQILP 700
Query: 409 EASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKA 468
++ K N F+ + ++ K GV KS + ++ + +++G V +T +A
Sbjct: 701 GSTLFIKNLN--FITSEETLQKTFSKCGVVKSCTISKKRDKAGKLLSMGYGFVQYKTPEA 758
Query: 469 -------LTNAGVNVSSLE------EFSAG-------KTDGLKRSNHVFLVKNLPYDSSE 508
L + V+ LE E +G K K++ LV+N+P+ ++
Sbjct: 759 AQKAMRQLQHCTVDEHQLEVKISEREVKSGVAQAKRKKQTARKQTTSKILVRNIPFQATV 818
Query: 509 GELAKMFGKFGSLDKVILP------STKTLALVVFLEPVEAAAAFKGLAYKRY-KGVPLY 561
EL ++F FG L V LP S + + FL +A AF L + + G L
Sbjct: 819 KELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKAFSALCHSTHLYGRRLV 878
Query: 562 LEWA 565
LEWA
Sbjct: 879 LEWA 882
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKS-RQFAFIGFRTEQEAEEAI 58
S+I V+N+P T LR+ F GE+ +L + G S R F FI F T+Q+A++A
Sbjct: 805 SKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKAF 863
>gi|449268059|gb|EMC78930.1| putative RNA-binding protein 19, partial [Columba livia]
Length = 922
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 177/466 (37%), Positives = 270/466 (57%), Gaps = 63/466 (13%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ ESGRLFVRNLP+T+TE++L + FSK+G +S++H +D+ TK+ KG A+V Y IPE A
Sbjct: 402 LAESGRLFVRNLPFTSTEEDLEKIFSKYGPLSDIHFPIDRLTKKPKGFAFVTYMIPEHAV 461
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT 414
+A LD +FQGR++H++P+ + K+++ ++ ++G+ + K+R++ + KA+ AS +
Sbjct: 462 KAYAELDGQVFQGRMMHLLPS----TIRKEKIKDADAEGSSSYKKRKDAKDKANSASSHN 517
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND-LAVRIALGETQVIAETKKALTNAG 473
WN+LF+ + V + IA+K+ SKS +LD E+ D +AVR+ALGET+++ E ++ L G
Sbjct: 518 --WNTLFVGTNAVADAIAQKYNASKSQVLDHESKDSVAVRVALGETELVQEIRRFLIENG 575
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
V++ S + +A +RS V LVKNLP ++ EL +FGK GSL +V+LP A
Sbjct: 576 VSLDSFSQAAA------ERSKTVILVKNLPAGTTVAELEDVFGKHGSLGRVLLPEGGVTA 629
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKR 593
+V FLE EA AF LAY R+ VPLYLEWAP V + K + +A E AK
Sbjct: 630 IVEFLELTEAKQAFMRLAYSRFHSVPLYLEWAPMGVFVNPTPPK--KSPEAPEKEGKAK- 686
Query: 594 ALLEQQLEGVTDADIDP-----------------------DRVESRSLFVKNLNFKTCDE 630
V D D D + + +LF+KNLNF T ++
Sbjct: 687 --------PVPDPDTDSAVKGSEEMAAQEEEKEEEEEEEEESIPGCTLFIKNLNFATTED 738
Query: 631 NLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDG 689
LR+ F K G + S + KK K G +SMGFGF+E+ E A R LQG +DG
Sbjct: 739 TLRETFS---KVGAVKSCTISKKKDKAGALLSMGFGFVEYKKPEGAQKALRRLQGCTVDG 795
Query: 690 HALILQL--------CHAKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
H L +++ + + +Q VKK ++++K+LVRN+ F+A
Sbjct: 796 HKLEVKISERALRPTVKSSRKKQTVKK----QTTSKILVRNIPFQA 837
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 123/223 (55%), Gaps = 8/223 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIG+++E EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRKLFAAFGTLTDCCLKFTKDGKFRKFGFIGYKSEDEAQMALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FN+S++DT RI+ E+ + GDP+ P+ WS++S K + EK AA G KK +K
Sbjct: 62 FNRSFIDTSRITVELCKAFGDPSKPKAWSKHSQKAPASEKQPEKPVRSAAPAGTKKDKKK 121
Query: 121 V--TEN-----DDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
TEN +D EFL V Q R + WANDTL K+K +++ E
Sbjct: 122 KDPTENLKQLEEDKTFQEFLVVHQKRSQVATWANDTLAEEPKKGKSKAADDYLN-FDSDE 180
Query: 174 KSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRV 216
+ D + D + T+ K AA + +SDMDY KS+V
Sbjct: 181 SEELSDEEEDGNEPPEDKEGTKGGKKAATSKDLSDMDYLKSKV 223
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPVEA 543
K++ LV+N+P+ ++ E+ ++F FG L V LP S + V FL +A
Sbjct: 822 KQTTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDA 881
Query: 544 AAAFKGLAYKRY-KGVPLYLEWA 565
AF L + + G L LEWA
Sbjct: 882 KKAFNALCHSTHLYGRRLVLEWA 904
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P T +R+ FS GE+ +L + G R F F+ F T+Q+A++A
Sbjct: 826 SKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAF 885
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASRA 356
+ ++ VRN+P+ AT E+RE FS FG + V + T +G +V + + A +A
Sbjct: 825 TSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKA 884
Query: 357 IEVLDNSI-FQGRLL 370
L +S GR L
Sbjct: 885 FNALCHSTHLYGRRL 899
>gi|194043009|ref|XP_001928191.1| PREDICTED: probable RNA-binding protein 19 [Sus scrofa]
Length = 967
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 176/468 (37%), Positives = 275/468 (58%), Gaps = 51/468 (10%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLFVRNLPYT++E++L + FSK+G +SE+H +D TK+ KG A+V + PE
Sbjct: 402 EEDLADSGRLFVRNLPYTSSEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMFPE 461
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A +D +FQGR+LHV+P+ KK + + ++ + G+ + K+++E + KAS +S
Sbjct: 462 HAVKAYAEVDGQVFQGRMLHVLPSTIKKEASE----DTDTPGSSSYKKKKESKDKASSSS 517
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALT 470
+ WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++ L
Sbjct: 518 SHN--WNTLFMGPNAVADAIAQKYNSTKSQVFDHETKGSVAVRVALGETQLVQEVRRFLL 575
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV++ S + +A +RS V L KNLP + EL + FG+FGSL +V+LP
Sbjct: 576 DNGVSLDSFSQAAA------ERSKTVILAKNLPAGTQAAELQETFGRFGSLGRVLLPEGG 629
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGN-QKNDAVVGEH 589
A+V FLE +EA AF+ LAY ++ VPLYLEWAP V S + K Q A + E
Sbjct: 630 VTAIVEFLEALEARKAFRHLAYSKFHHVPLYLEWAPMGVFSSPAPQKKEPQDTPAELTEK 689
Query: 590 D---------AKRALLEQQLEGVTDA------------DIDPDRVESRSLFVKNLNFKTC 628
D + +E+ EG DA + + + + +LF+KNLNF T
Sbjct: 690 DRMEPETVPCGETPEVEKPTEGGADAASAKVEEEEEEEEEEEESLPGCTLFIKNLNFSTT 749
Query: 629 DENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTIL 687
+E L+ F K G + S + KK K G +SMGFGF+E+ E A + LQG ++
Sbjct: 750 EETLKGVFS---KVGAVKSCSISKKKNKAGALLSMGFGFVEYKKPEQAQKALKQLQGHVV 806
Query: 688 DGHALILQLCH--------AKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
DGH L +++ A + +QV +K ++++K+LVRN+ F+A
Sbjct: 807 DGHKLEVRISERATKPAPTATRKKQVARK----QTTSKILVRNIPFQA 850
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 219/452 (48%), Gaps = 36/452 (7%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFTAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQTALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKN-PVLAAKRGEKKT 117
FNKS++DT RI+ E + GDP PR WS+++ K + K +D+ + P A K KK
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPTKPRAWSKHAQKPSQSKPPPKDKDSVPPEAKKDNRKKK 121
Query: 118 I----EKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSEN-ISQAIKGG 172
+ EK+ ++D+ Q EFL V Q R + WAND L + K+K +++ ++ G
Sbjct: 122 VAGELEKLKKDDEFQ--EFLSVHQKRTQVATWANDALDAEPSKGKSKPADDYLNFDSDSG 179
Query: 173 EKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGD 232
++S + D + +A + AAA + +SDMDY +S+V S E E +
Sbjct: 180 QESEEEGTRED-----PEEEADGLERKAAAQKELSDMDYLRSKVVAAESSEEEESEDEAV 234
Query: 233 DDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDV- 291
+ ++ EEE E + +K H +G E+ V P +P+ + +
Sbjct: 235 NFEEGSEAEEEGSCTAPTQQDREAAPAEVK---HWSLGREE-----VHPASPTFPAATLL 286
Query: 292 -------QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAY 344
Q+E + +R P+ TE + E + V+ + IV + ++ G +
Sbjct: 287 GTEKPAHQREPTTPHTVKLRGAPFNVTEKNVMEFLAPLKPVA-IRIVRNAHGNKT-GYVF 344
Query: 345 VLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEE 404
V ++ E +A++ + GR + V + ++ +++ + +TL + EEE
Sbjct: 345 VDFSSEEEVKKALQC-NREYMGGRYIEVFREKSIPTAKAPPKNSTKAWQGRTLGEHEEEE 403
Query: 405 RKASEASGNTKAWNSLFMRPDTVVENIARKHG 436
A SG N + + +E + K+G
Sbjct: 404 DLAD--SGRLFVRNLPYTSSEEDLEKLFSKYG 433
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP T V F +A
Sbjct: 835 KQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFFTKQDA 894
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 895 KRAFNALCHSTHLYGRRLVLEWADSEVTLQA 925
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 839 SKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFFTKQDAKRAF 898
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 899 NALCHSTHLYGRRLVLEWA 917
>gi|367018676|ref|XP_003658623.1| hypothetical protein MYCTH_2294614 [Myceliophthora thermophila ATCC
42464]
gi|347005890|gb|AEO53378.1| hypothetical protein MYCTH_2294614 [Myceliophthora thermophila ATCC
42464]
Length = 831
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 234/774 (30%), Positives = 372/774 (48%), Gaps = 99/774 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SR+ VKNLP ++E R+ FS +G E+TD KL +R+ F+G+++ ++A +A+K
Sbjct: 4 SRVFVKNLPPTISEAEFRNHFSAQGREVTDVKLF-----SNRRIGFVGYKSHEDAAKAVK 58
Query: 60 YFNKSYLDTCRISCEIARKVGD--PNMPRP-----------WSRYSLKKEKEVSEDEKNP 106
YFNK+++ RIS ++A+ + D P +P SR + ++DEK+
Sbjct: 59 YFNKTFIRLSRISVDLAKPIADSKPKLPAAKDEQRHDGAGISSRKLDGTGVDQTDDEKS- 117
Query: 107 VLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENIS 166
KK + E DP+L E+L+VM VK G AD A V +
Sbjct: 118 --------KKRKREALEEADPKLQEYLEVMGHPVKKPRDREVVGTGQEADSVAAVPPAVI 169
Query: 167 QA--------------IKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADEL------M 206
+A KGG K V++ + V T + + E+
Sbjct: 170 EAGESDDEYEDIPSLKPKGGPKGDPAPVEAAPTAVPDGEGPTPAAGDVRVREVPKVAADA 229
Query: 207 SDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIH 266
+D D+ +SR + D DD + + E DS
Sbjct: 230 TDDDWLRSRTNRLL-------DLVDPDDPEFAARAVPSAPAAATTHAPEPKDS------- 275
Query: 267 SGVGEEDANGEIVDPGNPSSS--SKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGN 324
G E N + + G P + ++D +++ ++ RLF+RNL YT TED+++EHFSKFG
Sbjct: 276 -GHVETTTNTDGPNQGAPVPTEDTEDAIKQIEKTRRLFLRNLSYTVTEDDIQEHFSKFGA 334
Query: 325 VSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQ 384
+ EV++ +D + KG A + Y P +A A + D SIFQGR++H++P K+
Sbjct: 335 LEEVNLPLDS-RGQGKGFAMIRYEQPAAAVAAFQT-DGSIFQGRIIHIIPGSAKREKKLD 392
Query: 385 ELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD 444
E S K ++++ +K +EA+ +T WNSLFM D V +A + G+SK +LLD
Sbjct: 393 EFALS-----KLPHKKQQLLKKKAEAASSTFNWNSLFMSQDAVNTAVAERLGISKHELLD 447
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPY 504
AV+ A+ ET VI E K GVN+ + + +R + LVKN+
Sbjct: 448 PTDASAAVKQAVAETTVIQEAKAHFAAHGVNIEAFK--------SQQRGDTAILVKNIKN 499
Query: 505 DSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEW 564
S E EL +F + GS+ +V++P + T+A+V F +P AAF AY R+K L+LE
Sbjct: 500 ASIE-ELRNLFEEHGSVVRVLMPPSGTIAIVQFGQPAACRAAFAKKAYSRFKDSVLFLEK 558
Query: 565 APSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLN 624
AP + ++ ++ + + LLE+ D + ++E+ SL+V+NLN
Sbjct: 559 APKGLFVDNAAPPQEPQDRPAGVQKPSVADLLERH-------DDEDQQLETTSLYVRNLN 611
Query: 625 FKTCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQ 683
F T E L F +H+ +VK KK K G+ +SMGFGF F + E A + +
Sbjct: 612 FSTTAEGLTNAF-KHLDGFVSATVKTKKDPKRPGQVLSMGFGFCAFRTKEQAQAALKVMD 670
Query: 684 GTILDGHALILQLCHAKKD-------EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
G +LD H L ++ H D E + KKA + TK++++N+ FEA +K
Sbjct: 671 GYVLDAHKLSVKASHRGHDAAEERRREDLAKKAAAQR--TKIVIKNLPFEATKK 722
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R FS G++ +L + + SR FAF F T +EA A+
Sbjct: 708 TKIVIKNLPFEATKKDVRALFSAYGKLVALRLPKKFNSMSRGFAFAEFATAKEALNALTA 767
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ + A
Sbjct: 768 LKDTHLLGRRLVLDFA 783
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGN-VSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ES R+FV+NLP T +E E R HFS G V++V + ++ I +V Y E A+
Sbjct: 1 MESSRVFVKNLPPTISEAEFRNHFSAQGREVTDVKLFSNRR------IGFVGYKSHEDAA 54
Query: 355 RAIEVLDNSIFQ 366
+A++ + + +
Sbjct: 55 KAVKYFNKTFIR 66
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R F + G+++++++ K + +S GF F EF + + A N
Sbjct: 710 IVIKNLPFEATKKDVRALFSAY---GKLVALRLPKKFNS---MSRGFAFAEFATAKEALN 763
Query: 678 VCRDLQGTILDGHALILQLCHAKK--DEQVVKKAEK 711
L+ T L G L+L A + E+ +K EK
Sbjct: 764 ALTALKDTHLLGRRLVLDFAEADEVDPEEQIKAMEK 799
>gi|85116206|ref|XP_965014.1| hypothetical protein NCU02611 [Neurospora crassa OR74A]
gi|74696746|sp|Q7SG09.1|MRD1_NEUCR RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|28926814|gb|EAA35778.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 827
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 235/768 (30%), Positives = 374/768 (48%), Gaps = 92/768 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI VKNLP +TE R FS +G ++TD KL+ +R F+G+++ ++A A+K
Sbjct: 5 SRIFVKNLPPTITEAEFRKHFSAEGRQVTDVKLI-----PARHIGFVGYKSAEDAARAVK 59
Query: 60 YFNKSYLDTCRISCEIARKVGD--PNMPRPWSRYS-----------LKKEKEVSEDEKNP 106
YFN+S++ RIS +IA+ + D P P S L +V+
Sbjct: 60 YFNRSFIRMSRISVDIAKPIADSKPQHKSPSKGSSKDADPKNAPKVLPPNTKVTAAAVPK 119
Query: 107 VLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENIS 166
V AA K+ ++ V + DP+L E+L VM KM + L V E ++
Sbjct: 120 VEAAPDAPKRKLD-VLDEADPKLQEYLDVMGAHPSKKMRNAEGL-------PTTVDEVLA 171
Query: 167 QAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESE 226
A+ G + + + D + +++ AD+ M D S SES
Sbjct: 172 PAVPAGLED------GESDDEYEDIPSRTHNQSHTADQEMVDAPLAAS-----AEPSESA 220
Query: 227 DDSAGDDDDDD----------DGEEEEEE----ENDHNGDSNEECDSIIKDSIHSGVGEE 272
+ D DDD D + E+ +G + S ++ S EE
Sbjct: 221 PPVSLDATDDDWLRSRTNRLLDLVDPEDAAFALRPAASGSAAVSVPSTSVENTASAKPEE 280
Query: 273 DANGEIVDPGNPSSSSKDVQQEVLE-SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
+ + S+ + ++E + RLF+RNL YT TED++REHF+KFG + EVH+
Sbjct: 281 HPAEDSREMAATSTHDPESAISLIEKTSRLFLRNLSYTVTEDDVREHFAKFGILVEVHVP 340
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D SKG A + Y P SA A + D ++FQGR++H++PA K+ + E S
Sbjct: 341 LDSK-GHSKGFAMIRYEKPASALAAFQT-DGTVFQGRIVHILPAAAKRENKLDEFALS-- 396
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLA 451
K ++++ RK +EA+ +T WNSLFM D V +A + GVSK++LLD A
Sbjct: 397 ---KLPLKKQQLLRKKAEAASSTFNWNSLFMSQDAVNTAMAERLGVSKAELLDPTDASAA 453
Query: 452 VRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGEL 511
V+ A+ ET VI E K+ GVN+ + KT +R + LVKN+ + E EL
Sbjct: 454 VKQAVAETTVIQEAKQYFAANGVNIEAF------KTQ--QRGDTTILVKNIKNTTIE-EL 504
Query: 512 AKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS 571
+F + G++ +V++P + T+A+V F +PV+ AF AY R+K L+LE P + +
Sbjct: 505 RTLFEEHGTVLRVLMPPSGTIAIVQFAQPVQCRTAFARKAYSRFKDSVLFLEKGPKGLFT 564
Query: 572 QSSTSKGNQKNDAVVGEHDAKRALLEQ-QLEGVTDADIDPDRVESRSLFVKNLNFKTCDE 630
D V DA+ A +++ + + + D +++E+ SLFV+NLNF T +
Sbjct: 565 -----------DNVAVPTDARPAGVQKPSVADLLERDDAEEQLETSSLFVRNLNFSTTSQ 613
Query: 631 NLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDG 689
L F +H+ VK K K G+ +SMGFGF+ F + + A + + G +LD
Sbjct: 614 GLTDAF-KHLDGFVQAKVKTKTDPKKPGQVLSMGFGFVAFRTKDQAQAALKVMDGQVLDA 672
Query: 690 HALILQLCH-------AKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
H + ++ H ++ E + KKA TKL+V+N+ FE +K
Sbjct: 673 HKISVKASHRGLDAAEERRREDMAKKAA--NQGTKLVVKNLPFEVTKK 718
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFG-NVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
S R+FV+NLP T TE E R+HFS G V++V ++ ++ I +V Y E A+RA
Sbjct: 4 SSRIFVKNLPPTITEAEFRKHFSAEGRQVTDVKLI------PARHIGFVGYKSAEDAARA 57
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGT 394
++ + S + + V A K +D + H S S+G+
Sbjct: 58 VKYFNRSFIRMSRISVDIA--KPIADSKPQHKSPSKGS 93
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKNLP VT+ +R FS G++ ++ + + SR FAF F T +EA A
Sbjct: 704 TKLVVKNLPFEVTKKEVRTLFSAYGKLVALRIPKKFNQSSRGFAFAEFSTAKEALNAFNS 763
Query: 61 FNKSYLDTCRISCEIAR 77
+++ R+ + A+
Sbjct: 764 LKDTHILGRRLVIDFAQ 780
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
L VKNL F+ + +R F + G+++++++ K S GF F EF + + A N
Sbjct: 706 LVVKNLPFEVTKKEVRTLFSAY---GKLVALRIPKKFNQS---SRGFAFAEFSTAKEALN 759
Query: 678 VCRDLQGTILDGHALILQLCHA 699
L+ T + G L++ A
Sbjct: 760 AFNSLKDTHILGRRLVIDFAQA 781
>gi|226292390|gb|EEH47810.1| multiple RNA-binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 820
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 225/762 (29%), Positives = 372/762 (48%), Gaps = 87/762 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D LR FS + ++TDA ++ R+ F+GF+T A++A+ Y
Sbjct: 5 TRVFVSGLPPTFSNDDLRKHFSIRFQVTDAHVI-----PKRRIGFVGFKTPSLAQDAVDY 59
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNKSY+ +I+ E+AR + D P +S K+ A K+ ++
Sbjct: 60 FNKSYIRMSKIAVEMARPI-DAEPPTVGKSHS-----------KHGTSANSTSLKRKHDQ 107
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLI-----------GLMADQKAKVSENISQAI 169
V + D +L E++ MQP +KSK WA+D+++ ++ A+ SE ++ +
Sbjct: 108 VEQKQDLKLQEYIAAMQPPMKSKTWADDSIMVDTNAVPANNATIIPSINAEKSEVQNKRL 167
Query: 170 KGGEKSITLHVKSDKSNVIT-DSQATEKSKN----------AAADELMSDMDYFKSRVKK 218
K +S+ + ++ N IT DS AT K ++ + + SDMD+ +SR +
Sbjct: 168 KLDHQSLVKKKQMERPNQITEDSLATPKPRSVEPENDPQVESVEEAPKSDMDWLRSRTSR 227
Query: 219 DWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEI 278
E EDD G E E + +DH C S + ++
Sbjct: 228 LLGLVEEEDDDDGSAVTPQVREIEASDGSDHEIVMGRNCP-------ESPLPRQNETPNP 280
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
D P ++ + + E+GR R L T+ +D + N ++H+ D +
Sbjct: 281 SDDKEPFDANIGL---LRETGRF--RRL--TSNDDFPDRDSLCYAN--DIHVAFDTRQSK 331
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKT 396
SKG AY+ Y PE+A +A +VLD F+GRLLH++PA KK+ D+ EL +K
Sbjct: 332 SKGFAYIQYVDPEAAIQAYQVLDGKDFEGRLLHILPASPKKTYKLDEYEL-------SKL 384
Query: 397 LKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIAL 456
+++++ ++ EA + WNSL+M D V+ +I+ + GVSKS+LLD ++D AV+ A
Sbjct: 385 PLKKQQQIKRKQEALSSNFNWNSLYMNADAVMSSISERLGVSKSELLDPTSSDAAVKQAH 444
Query: 457 GETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFG 516
ET VI ETK ++ GVN+ S ++ G N LVKN + +L K+F
Sbjct: 445 AETHVIQETKAYFSSNGVNLDSFKQREQG--------NTAILVKNFSFSVKAEDLRKLFE 496
Query: 517 KFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTS 576
FG + ++++P + T+A+V F E AFKGLAY++ L+LE AP D+ +
Sbjct: 497 SFGEIKRLLMPPSGTIAIVEFALADECQKAFKGLAYRKLGDSILFLERAPKDLFDE---- 552
Query: 577 KGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHF 636
K N + + ++AD + +E+ +LFV+NLNF T + L + F
Sbjct: 553 KAIATNAVLPAPRVVSQTFSTSDTFKASEADENETPLETSTLFVRNLNFSTTNVRLAEVF 612
Query: 637 GEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALI 693
+G LS +VK + G+ +SMGFGF+EF + A + G LD H L+
Sbjct: 613 --QPLDG-FLSARVKTKPNPKRPGETLSMGFGFVEFRTSAQARAALATMNGYKLDQHELV 669
Query: 694 LQLCHAKKDEQVVKKAEKDKS-----STKLLVRNVAFEAQRK 730
++ H D ++ E + TK+L++N+ F+A +K
Sbjct: 670 IKTSHKAMDAAEERRREDNAKKLAMRGTKILIKNLPFQATKK 711
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R+ F G++ ++ + D +R FAF F + +EAE A++
Sbjct: 697 TKILIKNLPFQATKKDIRNLFGAYGKLRSVRVPQKFDRTARGFAFADFISVREAENAMEA 756
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ E A
Sbjct: 757 LKHTHLLGRRLVLEFA 772
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V + + GF F +F SV A N
Sbjct: 699 ILIKNLPFQATKKDIRNLFGAY---GKLRSVRVPQKFDR---TARGFAFADFISVREAEN 752
Query: 678 VCRDLQGTILDGHALILQLC 697
L+ T L G L+L+
Sbjct: 753 AMEALKHTHLLGRRLVLEFA 772
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
L+KNLP+ +++ ++ +FG +G L V +P + + A F+ EA A + L +
Sbjct: 700 LIKNLPFQATKKDIRNLFGAYGKLRSVRVPQKFDRTARGFAFADFISVREAENAMEALKH 759
Query: 553 KRYKGVPLYLEWA 565
G L LE+A
Sbjct: 760 THLLGRRLVLEFA 772
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ ++ ++NLP+ AT+ ++R F +G + V V K + ++G A+ + A
Sbjct: 694 MRGTKILIKNLPFQATKKDIRNLFGAYGKLRSVR-VPQKFDRTARGFAFADFISVREAEN 752
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHN 388
A+E L ++ GR L + A + ++E+ N
Sbjct: 753 AMEALKHTHLLGRRLVLEFASEEAIDPEKEIRN 785
>gi|432094975|gb|ELK26383.1| Putative RNA-binding protein 19 [Myotis davidii]
Length = 966
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 179/487 (36%), Positives = 274/487 (56%), Gaps = 53/487 (10%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P SSSK Q L +SGRLFVRNLPYT+TE++L + FSK+G +SE+H
Sbjct: 381 GPPKSSSKPWQGRTLGEDEEEEDLADSGRLFVRNLPYTSTEEDLEKIFSKYGPLSELHYP 440
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A+V + PE A +A +D +FQGR+LHV+P+ KK + + ++++
Sbjct: 441 IDSLTKKPKGFAFVSFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIKKEASE----DASA 496
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ +S + WN LFM P+ V + IA+K+ +KS + D E +
Sbjct: 497 PGSSSYKKKKEAKDKANSSSSHN--WNMLFMGPNAVADAIAQKYSATKSQVFDHETKGSV 554
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 555 AVRVALGETQLVQEVRRFLLDNGVSLDSFSQPAA------ERSKTVILVKNLPAGTLAAE 608
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDV- 569
L + FG+FGSL +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 609 LQETFGRFGSLGRVLLPEGGVTAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPMGVF 668
Query: 570 LSQSSTSKGNQKNDAVVGEHDA----------KRALLEQQLEGVTDADI----------D 609
S + S+ Q A E D R E G D+ + +
Sbjct: 669 FSSAPQSEEPQDTPAEPAEKDGAEPEPVPDSETREGEEPTEGGAADSSLKMEEEEEEEEE 728
Query: 610 PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIE 668
+ + +LF+KNLNF T +E L+ F K G + S + +K K G +SMGFGF+E
Sbjct: 729 EESLPGCTLFIKNLNFDTTEETLKGVFS---KMGAVRSCSISRKKNKAGALLSMGFGFVE 785
Query: 669 FDSVETATNVCRDL-QGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNV 723
+ E A + L G ++D H L +++ + K+ + ++++K+LVRN+
Sbjct: 786 YRKPEQAQKALKQLXXGHVVDDHKLEVRISERATKPALTSARKKQVPRKQTTSKILVRNI 845
Query: 724 AFEAQRK 730
F+A +
Sbjct: 846 PFQAHSR 852
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 191/395 (48%), Gaps = 47/395 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQRALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK----KEKEVSEDEKNPVLAAKRGEKK 116
F+KS++DT RI+ E R GDP PR WS+++ K K+ +D P + +KK
Sbjct: 62 FHKSFVDTSRITVEFCRSFGDPTKPRAWSKHAQKPSQAKQPPKDKDSVPPETKKDKKKKK 121
Query: 117 TIEKVTE-NDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
++ E ++ + EFL V Q R ++ WAND L + K+K + S
Sbjct: 122 AASELEELKENTEFREFLSVHQRRTQAATWANDALDTEPSQGKSK------------QAS 169
Query: 176 ITLHVKSDKSNVITDSQATEKSK-------NAAADELMSDMDYFKSRVKKDWSDSESEDD 228
L+ SD S ++ A E S+ AA + +SDMDY KS+V + S S SE++
Sbjct: 170 DYLNFDSD-SGQESEEGAGEDSEEEGGLEPKAAVRKELSDMDYLKSKVVRAESLSSSEEE 228
Query: 229 SAGDDD------DDDDGEEEEEEENDHNGDSNEECDSIIKDSI-HSGVGEEDANGEIVDP 281
+++ + D+G E EEE + C + + +G G E
Sbjct: 229 EEEEEESEDEAVNCDEGSEAEEE---------DPCAAPARQGQERTGPGPEQGTLSGTKK 279
Query: 282 GNPSSSSKD---VQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
+S+ K+ VQ E + +R P+ TE + E + V+ + IV + +
Sbjct: 280 PQEASAQKEKPAVQWEPSTPHTVKLRGAPFNVTEKNVTEFLAPLKPVA-IRIVRNAHGNK 338
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
+ G +V ++ E +A++ + GR + V
Sbjct: 339 T-GYVFVDFSSEEEVKKALKC-NREYMGGRYIEVF 371
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP T V FL +A
Sbjct: 834 KQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFLTKQDA 893
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 894 KRAFNALCHSTHLYGRRLVLEWADSEVTLQA 924
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 838 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFLTKQDAKRAF 897
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 898 NALCHSTHLYGRRLVLEWA 916
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASRA 356
+ ++ VRN+P+ A E+RE FS FG + V + T +G +V + + A RA
Sbjct: 837 TSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFLTKQDAKRA 896
Query: 357 IEVLDNSI-FQGRLL 370
L +S GR L
Sbjct: 897 FNALCHSTHLYGRRL 911
>gi|407039238|gb|EKE39532.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 697
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 167/466 (35%), Positives = 265/466 (56%), Gaps = 51/466 (10%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E GR+++ NLP+ TED++R+ F +FGN++E+H+ +DK TK+SKG +VL+ +P+ A +A
Sbjct: 184 EEGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKA 243
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA 416
+DN +GR++HV A+ S++Q +K K++++ E KA +GN
Sbjct: 244 CNEMDNKFIKGRIVHVTYAKADPYSNQQ------VGESKNYKEKKQNELKAK--AGNQFN 295
Query: 417 WNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNV 476
W++L+MR DT V +A + G+ K ++LD A +AVR+AL E VI +TKK L GVN
Sbjct: 296 WSTLYMRQDTAVSAVAEELGMKKEEILDVNAESMAVRVALAENYVINQTKKWLEENGVNC 355
Query: 477 SSLEEFSAGKTDGL--KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLAL 534
+ LE +G+ KRSN++ +VKN+ + + E+ +F KFG+L + ++P +K LAL
Sbjct: 356 TVLE-------NGMKEKRSNNIIIVKNIAASAIDLEVKSLFEKFGTLKQFLMPKSKALAL 408
Query: 535 VVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK-- 592
V F +A AFK L Y RY+G+PLYLEWAP V + +K + + + E +K
Sbjct: 409 VEFEVANDAKTAFKRLVYSRYRGIPLYLEWAPEKVFDEEKVNK-KMEEEKLTQEKQSKTI 467
Query: 593 -----------------------RALLEQQLEGVTDADIDPDRVE--SRSLFVKNLNFKT 627
+Q+ + T + VE S++L+VKN++FKT
Sbjct: 468 QKEESQKKKEEKTKQEEDKKKQEEDKKKQEEDKTTTKSNQTELVEEGSKTLYVKNISFKT 527
Query: 628 CDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTIL 687
++ +RK F K GR+L+V + K + GFGF+E+ E A N + LQG ++
Sbjct: 528 KEDVIRKVFE---KCGRVLAVTLSKTKDKKVEKNSGFGFVEYAKHEDAINAIKTLQGKVI 584
Query: 688 DGHALILQLCHAK---KDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
DGHA+ +++ K +D + K+ E+ K S KLLV+NV FE K
Sbjct: 585 DGHAVQIEISQPKVKDEDHKERKEIEEHKVSNKLLVKNVPFETNIK 630
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI +KNLP+ E L+ F + G ITD K+MRT G SR+F FIGF E +A+ AI
Sbjct: 2 SRIIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQGNSRKFGFIGFENEDQAQTAITK 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
N +Y+ + ++ +A+ +GD + RPWS+YS+ S D+K V+ K E +TI+K
Sbjct: 62 MNGAYIQSSKLQVSLAKAIGDQTIERPWSKYSV-GSSSFSNDKKRKVIPTKH-ETQTIKK 119
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 124/294 (42%), Gaps = 30/294 (10%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ ++NLP A E L++ F KFG +++ V+ S+ ++ + + A AI
Sbjct: 3 RIIIKNLPERADEKILKQQFEKFGGITDCK-VMRTPQGNSRKFGFIGFENEDQAQTAITK 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNS 419
++ + Q L V A+ + G +T+++ + S + N K
Sbjct: 62 MNGAYIQSSKLQVSLAK--------------AIGDQTIERPWSKYSVGSSSFSNDKKRKV 107
Query: 420 LFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI-----AETKKALTNAGV 474
+ + +T + I +K S D L + AN+ ++ G+ + + + + +
Sbjct: 108 IPTKHET--QTIKKKKDSSSLDELKKMANERRPKLDNGKKKKFDSEEDDQNNQHMEEEEI 165
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP------S 528
+ S + D + NLP++ +E ++ K F +FG++ ++ LP
Sbjct: 166 INEQEHQKSMDEIDVKDWEEGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKK 225
Query: 529 TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN 582
+K V+F+ P +A A + K KG +++ +A +D S G KN
Sbjct: 226 SKGFGFVLFVVPQDAVKACNEMDNKFIKGRIVHVTYAKADPYSNQQV--GESKN 277
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L V+N+P+ E+RE F +G + V + D ++KG A+V YA + A+ A+
Sbjct: 615 SNKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKVDG-QNKGFAFVEYATKQEAANAM 673
Query: 358 EVLDNSIFQGRLLHVMPAR 376
L NS F GR L + A+
Sbjct: 674 AALKNSHFYGRHLIIEYAK 692
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P +R+ F G + +L + DG+++ FAF+ + T+QEA A+
Sbjct: 616 NKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKKVDGQNKGFAFVEYATKQEAANAMAA 675
Query: 61 FNKSYLDTCRISCEIAR 77
S+ + E A+
Sbjct: 676 LKNSHFYGRHLIIEYAK 692
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 39/220 (17%)
Query: 484 AGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEA 543
+ +T+ ++ + VKN+ + + E + K+F K G + V L TK + VE
Sbjct: 505 SNQTELVEEGSKTLYVKNISFKTKEDVIRKVFEKCGRVLAVTLSKTKD-------KKVEK 557
Query: 544 AAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGV 603
+ F + Y +++ D ++ T +G V+ H + +E V
Sbjct: 558 NSGFGFVEYAKHE-----------DAINAIKTLQGK-----VIDGHAVQ---IEISQPKV 598
Query: 604 TDAD------IDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNG 657
D D I+ +V S L VKN+ F+T + +R+ F + G + V++ K + +G
Sbjct: 599 KDEDHKERKEIEEHKV-SNKLLVKNVPFETNIKEVRELFRTY---GTLRGVRLPKKV-DG 653
Query: 658 KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
+N GF F+E+ + + A N L+ + G LI++
Sbjct: 654 QN--KGFAFVEYATKQEAANAMAALKNSHFYGRHLIIEYA 691
>gi|336464808|gb|EGO53048.1| hypothetical protein NEUTE1DRAFT_73283 [Neurospora tetrasperma FGSC
2508]
Length = 827
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 232/771 (30%), Positives = 376/771 (48%), Gaps = 98/771 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SR+ VKNLP +TE R FS +G ++TD KL+ +R F+G+++ ++A A+K
Sbjct: 5 SRVFVKNLPPTITEAEFRKHFSAEGRQVTDVKLI-----PARHIGFVGYKSAEDAARAVK 59
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNP------------- 106
YFN+S++ RIS +IA+ + D +P + + K + ++ + P
Sbjct: 60 YFNRSFIRMSRISVDIAKPIADS---KPQHKPASKGPSKDADPKNAPQVVPPNTKVTAAA 116
Query: 107 ---VLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSE 163
V AA K+ + V + DP+L E+L VM KM + L V E
Sbjct: 117 VPKVEAAPDAPKRKL-YVLDEADPKLQEYLDVMGAHPSKKMRNAEGL-------PTTVDE 168
Query: 164 NISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDS 223
++ A+ G + + + D + +++ AD+ M D S S
Sbjct: 169 VLAPAVPAGLED------GESDDEYEDIPSRTHNQSHTADQEMVDAPLAAS-----AEPS 217
Query: 224 ESEDDSAGDDDDDD----------DGEEEEEE----ENDHNGDSNEECDSIIKDSIHSGV 269
ES + D DDD D + E+ +G + S ++ S
Sbjct: 218 ESAPPVSLDATDDDWLRSRTNRLLDLVDPEDAAFALRPAASGPAAVSVPSTSVENTASAK 277
Query: 270 GEEDANGEIVDPGNPSSSSKDVQQEVLE-SGRLFVRNLPYTATEDELREHFSKFGNVSEV 328
EE + + S+ + ++E + RLF+RNL YT TED++REHF+KFG + EV
Sbjct: 278 PEEHPAEDSREMAATSTHDPESAISLIEKTSRLFLRNLSYTVTEDDVREHFAKFGTLEEV 337
Query: 329 HIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHN 388
H+ +D SKG A + Y P SA A + D ++FQGR++H++PA K+ + E
Sbjct: 338 HVPLDSK-GHSKGFAMIRYEKPASALAAFQT-DGTVFQGRIVHILPAAAKRENKLDEFAL 395
Query: 389 STSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN 448
S K ++++ RK +EA+ +T WNSLFM D V +A + GVSK++LLD
Sbjct: 396 S-----KLPLKKQQLLRKKAEAASSTFNWNSLFMSQDAVNTAMAERLGVSKAELLDPTDA 450
Query: 449 DLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSE 508
AV+ A+ ET VI E K+ GVN+ + KT +R + LVKN+ + E
Sbjct: 451 SAAVKQAVAETTVIQEAKQYFAANGVNIEAF------KTQ--QRGDTTILVKNIKNTTIE 502
Query: 509 GELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSD 568
EL +F + G++ +V++P + T+A+V F +PV+ AF AY R+K L+LE P
Sbjct: 503 -ELRTLFEEHGTVLRVLMPPSGTIAIVQFAQPVQCRTAFARKAYSRFKDSVLFLEKGPKG 561
Query: 569 VLSQSSTSKGNQKNDAVVGEHDAKRALLEQ-QLEGVTDADIDPDRVESRSLFVKNLNFKT 627
+ + D V DA+ A +++ + + + D +++E+ SLFV+NLNF T
Sbjct: 562 LFT-----------DNVAVPTDARPAGVQKPSVADLLERDDAEEQLETSSLFVRNLNFST 610
Query: 628 CDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTI 686
+ L F +H+ VK K K G+ +SMGFGF+ F + + A + + G +
Sbjct: 611 TSQGLTDAF-KHLDGFVQAKVKTKTDPKKPGQVLSMGFGFVAFRTKDQAQAALKVMDGQV 669
Query: 687 LDGHALILQLCH-------AKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
LD H + ++ H ++ E + KKA TKL+V+N+ FE +K
Sbjct: 670 LDAHKISVKASHRGLDAAEERRREDMAKKAA--NQGTKLVVKNLPFEVTKK 718
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFG-NVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
S R+FV+NLP T TE E R+HFS G V++V ++ ++ I +V Y E A+RA
Sbjct: 4 SSRVFVKNLPPTITEAEFRKHFSAEGRQVTDVKLI------PARHIGFVGYKSAEDAARA 57
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQG 393
++ + S + + V A K +D + H S+G
Sbjct: 58 VKYFNRSFIRMSRISVDIA--KPIADSKPQHKPASKG 92
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKNLP VT+ +R FS G++ ++ + + SR FAF F T +EA A
Sbjct: 704 TKLVVKNLPFEVTKKEVRTLFSTYGKLVALRIPKKFNQSSRGFAFAEFSTAKEALNAFNS 763
Query: 61 FNKSYLDTCRISCEIAR 77
+++ R+ + A+
Sbjct: 764 LKDTHILGRRLVIDFAQ 780
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
L VKNL F+ + +R F + G+++++++ K S GF F EF + + A N
Sbjct: 706 LVVKNLPFEVTKKEVRTLFSTY---GKLVALRIPKKFNQS---SRGFAFAEFSTAKEALN 759
Query: 678 VCRDLQGTILDGHALILQLCHA 699
L+ T + G L++ A
Sbjct: 760 AFNSLKDTHILGRRLVIDFAQA 781
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 259/443 (58%), Gaps = 42/443 (9%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
+ E E GR+ V NLPY +E ++RE F KFG ++EVH+ +DK + ++KG A+V+Y +P+
Sbjct: 206 ENENWEEGRILVNNLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQ 265
Query: 352 SASRAIEVLDNSIFQGRLLHVMPAR---HKKSSDKQELHNSTSQGTKTLKQRREEERKAS 408
A +A +D + +GR++HV A+ + ++++++E KT K ++ E K
Sbjct: 266 DAVKAFNEMDGQVIKGRIIHVNYAKADPYAQTTEEKE--------AKTYKDKKANELK-- 315
Query: 409 EASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKA 468
+ + N W +L+MRPDT + +A + G++K LD +++LAVR AL ET VI ETKK
Sbjct: 316 KRASNQFNWATLYMRPDTAITAVAEQLGMAKEKFLDVNSSNLAVRAALAETFVINETKKY 375
Query: 469 LTNAGVNVSSLEEFSAGKTDGL--KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVIL 526
L + GVN + LE +GL KR N +VKN+ ++ +GE+ MF G L + ++
Sbjct: 376 LGDRGVNCTVLE-------NGLNEKRGNTAIIVKNIAANADQGEIKTMFENCGKLKRFLM 428
Query: 527 PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVV 586
P +K LA+ F++P +A AFK + Y RYKGVPLYLEWAP + ++ + S + V
Sbjct: 429 PKSKALAIAEFIQPNDAKTAFKRIVYSRYKGVPLYLEWAPERLFNEEAKSTEEEVPKKVE 488
Query: 587 GEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRIL 646
+ K + +E T +L++KN+N KT ++ LRK F ++ G+I
Sbjct: 489 KKESPKEGGELELVEEGT-----------HTLYIKNVNPKTTEDTLRKVFTQY---GQIH 534
Query: 647 SVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQV- 705
SV + K+ + KNV F F+EF +A N ++ QG ++DG+A+ ++L KKD+
Sbjct: 535 SVSISKNPTSSKNV---FCFLEFARHSSALNAMKNAQGQLVDGNAIAIELSIPKKDDFTH 591
Query: 706 --VKKAEKDKSSTKLLVRNVAFE 726
KKAE +STKLLV+N+ FE
Sbjct: 592 AKRKKAEDVTASTKLLVKNLPFE 614
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 66/92 (71%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LP TE +++ F G ITD KL+RTK+G SR+FAF+GF TE EA+ AI+
Sbjct: 2 SRIIVKGLPHVATEKTIKEAFQSFGNITDCKLVRTKEGVSREFAFLGFSTESEAQNAIEK 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
N +Y+ + +I+ IA+K+GD ++ RPWS+YS
Sbjct: 62 MNNAYILSSKINVSIAKKIGDKSIERPWSKYS 93
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ V+ LP+ ATE ++E F FGN+++ +V K+ S+ A++ ++ A AIE
Sbjct: 3 RIIVKGLPHVATEKTIKEAFQSFGNITDCKLVRTKEG-VSREFAFLGFSTESEAQNAIEK 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDK 383
++N+ ++V A KK DK
Sbjct: 62 MNNAYILSSKINVSIA--KKIGDK 83
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKY 60
RI V NLP +E +R+ F + GEIT+ L K GK++ FAF+ + Q +A+K
Sbjct: 214 RILVNNLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQ---DAVKA 270
Query: 61 FN 62
FN
Sbjct: 271 FN 272
>gi|355715636|gb|AES05391.1| RNA binding motif protein 19 [Mustela putorius furo]
Length = 823
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 165/431 (38%), Positives = 245/431 (56%), Gaps = 42/431 (9%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLF+RNLPYT+TE++L + FSKFG +SE+H +D TK+ KG A+V + PE
Sbjct: 399 EEDLADSGRLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFMFPE 458
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A RA +D +FQGR+LHV+P+ KK + + TS + K++ +++ S +S
Sbjct: 459 HAVRAYAEVDGQVFQGRMLHVLPSTIKKEASEDA---DTSGSSSYKKKKESKDKANSSSS 515
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALT 470
N WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++ L
Sbjct: 516 HN---WNTLFMGPNAVADAIAQKYSATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLL 572
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV++ S + +A +RS V LVKN+P + EL + FG+FGSL +V+LP
Sbjct: 573 DNGVSLDSFSQAAA------ERSKTVILVKNVPAGTLAAELQETFGRFGSLGRVLLPEGG 626
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHD 590
A+V F+EP+EA AF+ LAY ++ PLYLEWAP V S S + + D G +
Sbjct: 627 VTAIVEFVEPLEARKAFRHLAYSKFHHAPLYLEWAPVGVFS-GSAPQTKEPRDPPAGPAE 685
Query: 591 AKRALLEQQLEGVTDADIDP------------------------DRVESRSLFVKNLNFK 626
R E + T D P + + +LF+KNLNF
Sbjct: 686 EDRTEPETLPDNKTPEDEKPAEGGAADSPAKVEEEEEEEEEEEEESLPGCTLFIKNLNFN 745
Query: 627 TCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGT 685
T +E L+ F K G + S V KK K G +SMGFGF+E+ E A R LQG
Sbjct: 746 TTEETLKDVFS---KAGTVKSCSVSKKKNKAGALLSMGFGFVEYRKPEQAQKALRQLQGH 802
Query: 686 ILDGHALILQL 696
++DGH L +++
Sbjct: 803 VVDGHKLEVRI 813
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 127/227 (55%), Gaps = 18/227 (7%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F G +TD L TKDGK R+F FIGF++E+EA A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFGSFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEARTALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RIS E + GDP PR WSR++ K + K S+D K+ V + + KT
Sbjct: 62 FNKSFIDTSRISVEFCKAFGDPTKPRAWSRHAQKTSQSKNPSKD-KDAVPTEPKKDDKTK 120
Query: 118 -----IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKG 171
+EK+ E D + EFL V Q R+++ WAND L + K+K S+ ++
Sbjct: 121 RVASELEKLKE--DTEFQEFLSVHQKRMQTATWANDALDTEASKGKSKAASDYLNFDSDS 178
Query: 172 GEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKK 218
G++S D + + + + A EL SDMDY KS+V K
Sbjct: 179 GQESDEEVASGD-----PEEEGGHEPRAAVQTEL-SDMDYLKSKVVK 219
>gi|350296911|gb|EGZ77888.1| multiple RNA-binding domain-containing protein 1 [Neurospora
tetrasperma FGSC 2509]
Length = 826
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 232/776 (29%), Positives = 380/776 (48%), Gaps = 109/776 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SR+ VKNLP +TE R FS +G ++TD KL+ +R F+G+++ ++A A+K
Sbjct: 5 SRVFVKNLPPTITEAEFRKHFSAEGRQVTDVKLI-----PARHIGFVGYKSAEDAARAVK 59
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNP------------- 106
YFN+S++ RIS +IA+ + D +P + + K + ++ + P
Sbjct: 60 YFNRSFIRMSRISVDIAKPIADS---KPQHKLASKGPSKDADPKNAPKVVPPNTKVTAAA 116
Query: 107 ---VLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSE 163
V AA K+ ++ V + DP+L E+L VM KM + L V E
Sbjct: 117 VPKVEAAPDAPKRKLD-VLDEADPKLQEYLDVMGAHPSKKMRNAEGL-------PTTVDE 168
Query: 164 NISQAIKGG--------------EKSITLHVKSDKSNVITDSQAT-EKSKNAAADEL-MS 207
++ A+ G ++ H +D+ V T A+ E S++A L +
Sbjct: 169 VLAPAVPAGLEDGESDDEYEDIPSRTHQSHT-ADQEMVETPLAASAEPSESAPPVSLDAT 227
Query: 208 DMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIH- 266
D D+ +SR + + ED ++ S S+ S+
Sbjct: 228 DHDWLRSRTNRLLDLVDPEDAASAL----------------RPAASAPVAVSVPSTSVEN 271
Query: 267 --SGVGEEDANGEIVDPGNPSSSSKDVQQEVLE-SGRLFVRNLPYTATEDELREHFSKFG 323
S EE + + + S+ + ++E + RLF+RNL YT TED++REHF+KFG
Sbjct: 272 TASAKAEEQSAEDSREMAATSTHDTESAISLIEKTSRLFLRNLSYTVTEDDVREHFAKFG 331
Query: 324 NVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK 383
+ EVH+ +D SKG A + Y P SA A + D ++FQGR++H++PA K+ +
Sbjct: 332 TLEEVHVPLD-GKGHSKGFAMIRYENPASALAAFQT-DGTVFQGRIVHILPAAAKRENKL 389
Query: 384 QELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLL 443
E S K ++++ RK +EA+ +T WNSLFM D V +A + GVSK++LL
Sbjct: 390 DEFALS-----KLPLKKQQLLRKKAEAASSTFNWNSLFMSQDAVNTAMAERLGVSKAELL 444
Query: 444 DREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLP 503
D AV+ A+ ET VI E K+ GVN+ + KT +R + LVKN+
Sbjct: 445 DPTDASAAVKQAVAETTVIQEAKQYFAANGVNIEAF------KTQ--QRGDTTILVKNIK 496
Query: 504 YDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLE 563
+ E E+ +F + G++ +V++P + T+A+V F +PV+ AF AY R+K L+LE
Sbjct: 497 NATIE-EMRTLFEEHGTVLRVLMPPSGTIAIVQFAQPVQCRTAFARKAYSRFKDSVLFLE 555
Query: 564 WAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQ-QLEGVTDADIDPDRVESRSLFVKN 622
P + + D V DA+ A +++ + + + D +++E+ SLFV+N
Sbjct: 556 KGPKGLFT-----------DNVAVPTDARPAGVQKPSVADLLERDDAEEQLETSSLFVRN 604
Query: 623 LNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRD 681
LNF T + L F +H+ VK K K G+ +SMGFGF+ F + + A +
Sbjct: 605 LNFSTTSQGLTDAF-KHLDGFVQAKVKTKTDPKKPGQVLSMGFGFVAFRTKDQAQAALKV 663
Query: 682 LQGTILDGHALILQLCH-------AKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ G +LD H + ++ H ++ E + KKA TKL+V+N+ FE +K
Sbjct: 664 MDGQVLDVHKISVKASHRGLDAAEERRREDMAKKAA--NQGTKLVVKNLPFEVTKK 717
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFG-NVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
S R+FV+NLP T TE E R+HFS G V++V ++ ++ I +V Y E A+RA
Sbjct: 4 SSRVFVKNLPPTITEAEFRKHFSAEGRQVTDVKLI------PARHIGFVGYKSAEDAARA 57
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQG 393
++ + S + + V A K +D + H S+G
Sbjct: 58 VKYFNRSFIRMSRISVDIA--KPIADSKPQHKLASKG 92
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKNLP VT+ +R FS G++ ++ + + SR FAF F T +EA A
Sbjct: 703 TKLVVKNLPFEVTKKEVRTLFSTYGKLVALRIPKKFNQSSRGFAFAEFSTAKEALNAFNS 762
Query: 61 FNKSYLDTCRISCEIAR 77
+++ R+ + A+
Sbjct: 763 LKDTHILGRRLVIDFAQ 779
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
L VKNL F+ + +R F + G+++++++ K S GF F EF + + A N
Sbjct: 705 LVVKNLPFEVTKKEVRTLFSTY---GKLVALRIPKKFNQS---SRGFAFAEFSTAKEALN 758
Query: 678 VCRDLQGTILDGHALILQLCHA 699
L+ T + G L++ A
Sbjct: 759 AFNSLKDTHILGRRLVIDFAQA 780
>gi|403281594|ref|XP_003932266.1| PREDICTED: probable RNA-binding protein 19 [Saimiri boliviensis
boliviensis]
Length = 960
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 177/489 (36%), Positives = 273/489 (55%), Gaps = 57/489 (11%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
G P +S+K Q +L ESGRLFVRNLPYT+TE++L + FSK+G +SE+H
Sbjct: 375 GPPKNSAKSWQGRMLGENEEEEDLAESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYP 434
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D TK+ KG A+V + PE A +A +D +FQGR+LHV+P+ KK + + ++++
Sbjct: 435 IDSLTKKPKGFAFVTFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKKETSE----DASA 490
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDL 450
G+ + K+++E + KA+ AS + WN+LFM P+ V + IA+K+ +KS + D E +
Sbjct: 491 LGSLSYKKKKEAQDKANSASSHN--WNTLFMGPNAVADAIAQKYSATKSQVFDHETRGSV 548
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP + E
Sbjct: 549 AVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLAAE 602
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L + FG+FGSL +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 603 LQETFGRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVGVF 662
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR------------------ 612
S ++ K + DA + +A G T D +P
Sbjct: 663 SGAAPQK-KEPQDAPPEPTEKDQAEPGTVSSGETPEDENPTEEAADSSSAKMEEEEEEEE 721
Query: 613 -----VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGF 666
+ +LF+KNLNF T +E L++ F K G + S + KK K G + G
Sbjct: 722 EEEESLPGCTLFIKNLNFDTTEEKLKEVFS---KVGTVKSCSISKKKNKAGIPHEIPAGR 778
Query: 667 IEFD-SVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVR 721
F +++ T V R LQG I+D H L +++ + K+ + ++++K+LVR
Sbjct: 779 SGFPKTLQLQTRVLR-LQGHIVDDHKLEVRISERATKPAMTSARKKQVPRKQTTSKILVR 837
Query: 722 NVAFEAQRK 730
N+ F+A +
Sbjct: 838 NIPFQAHSR 846
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 127/230 (55%), Gaps = 26/230 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF+TE+EA++A+K+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKTEEEAQKALKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + KE +D P + +KK
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPTKPRAWSKHAQKPSQPKESPKDSATPEMKKDEKKKKVA 121
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
+EK+ E D + EFL V Q R ++ WAND L + K+K++ +
Sbjct: 122 GQLEKLKE--DTEFQEFLSVHQRRAQAATWANDGLDAEPSRGKSKLASDY---------- 169
Query: 176 ITLHVKSDKSNVITDSQATEK-------SKNAAADELMSDMDYFKSRVKK 218
L+ SD + A E + AA + +SDMDY KS++ K
Sbjct: 170 --LNFDSDSGQESEEEGAGEDLEEEANFERKAAVQKELSDMDYLKSKMVK 217
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP T V FL +A
Sbjct: 828 KQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDA 887
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA ++V Q+
Sbjct: 888 KRAFNALCHSTHLYGRRLVLEWADTEVTLQA 918
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRS 339
P S+ K V ++ S ++ VRN+P+ A E+RE FS FG + V + T
Sbjct: 815 PAMTSARKKQVPRKQTTS-KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTH 873
Query: 340 KGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
+G +V + + A RA L +S GR L
Sbjct: 874 RGFGFVDFLTKQDAKRAFNALCHSTHLYGRRL 905
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 892 NALCHSTHLYGRRLVLEWA 910
>gi|156402343|ref|XP_001639550.1| predicted protein [Nematostella vectensis]
gi|156226679|gb|EDO47487.1| predicted protein [Nematostella vectensis]
Length = 862
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 175/446 (39%), Positives = 270/446 (60%), Gaps = 33/446 (7%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++ + ESGRLF+RNL Y+ +E++++ F KFG +SEV++ +DK T ++ GI +V + +PE
Sbjct: 356 EEPIGESGRLFLRNLAYSCSEEDIQHLFEKFGPLSEVNLPLDKHTNKTIGIGFVTFLMPE 415
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A LD ++FQGRLLH++PA+ KK ++ ++G ++ +++ E K + S
Sbjct: 416 HAVKAFNELDGTVFQGRLLHILPAKAKKE------ESNDNEGITSISYKKKNEEKKKKQS 469
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE-ANDLAVRIALGETQVIAETKKALT 470
G+ WN+LF+ + V + +A K+ SK D+LD E ++ LAVR+ALGETQ++AET+K LT
Sbjct: 470 GSDHNWNTLFLGLNAVADVMADKYNTSKRDILDAESSHSLAVRMALGETQLVAETRKFLT 529
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
GV + + +A RS V + KNLPY ++ EL +F FG L +VILP +
Sbjct: 530 EQGVKLDVFGQAAAS------RSKTVIVAKNLPYGTNAEELRTLFSAFGQLGRVILPPSG 583
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAV-VGEH 589
AL+ EP A AF+ LAY ++K PLYLEWAP DV + G K D++ +
Sbjct: 584 ITALIEIPEPSLARKAFQKLAYSKFKNSPLYLEWAPLDVFVE-----GQLKKDSLEKTDK 638
Query: 590 DAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE--HIKEGRILS 647
DA ++ E+Q +A D + E +LFVKNL+F++ +E L++ F +K I
Sbjct: 639 DADQS--EEQ-----NAGSDEEDTEGVTLFVKNLSFESTEEALKQKFAAVGPVKSATI-- 689
Query: 648 VKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH---AKKDEQ 704
K K K G +SMG+GF+EF + +A + LQ + LDGHAL L+ H K++ +
Sbjct: 690 AKKKDPKKPGSLLSMGYGFVEFCNKASAQEALKSLQHSQLDGHALELKQSHRKSGKEESK 749
Query: 705 VVKKAEKDKSSTKLLVRNVAFEAQRK 730
K A++ + S+K+LVRNV FEA K
Sbjct: 750 RKKSAKQKQKSSKILVRNVPFEATTK 775
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 178/364 (48%), Gaps = 55/364 (15%)
Query: 25 GEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNM 84
GEITD KL RTKDGK R+F F+G++TE++AE A+KYFN S++DT +I ++AR +GD +
Sbjct: 1 GEITDIKLCRTKDGKFRRFGFVGYKTEKQAENALKYFNNSFIDTSKIQVDLARNLGDKDA 60
Query: 85 PRPWSRYS------LKKEKEVSEDEKNPVLAAKRGEKKT---------IEKVTENDDPQL 129
PRPWS+YS KK K++ E ++ V A K +E++ E DP+
Sbjct: 61 PRPWSKYSEHSSAYQKKVKKLLEKNEDKVGAKDDKVMKKKKSKEKVKGLEELDE--DPEF 118
Query: 130 LEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLHVKSDKSNVIT 189
EF+ + R K +W+NDTLI + Q+ + A+K + + ++ T
Sbjct: 119 QEFVSAHESRSKKSLWSNDTLI---SKQRNSNEKETKMAVKFEDSDESDDDLTEDMEQNT 175
Query: 190 DSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDH 249
D + S A D +SDMDY +++V S +ES+ D + D DDD EE + +
Sbjct: 176 D----DNSNTVAKDSSISDMDYLRTKVTS--SKTESDTDVNKEFDSDDDREETIDASKNP 229
Query: 250 NGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYT 309
+G S+ D E P P ++ + +R LP+
Sbjct: 230 DGSSD-----------------VDEPQETPQPDKPKPTTPWTCK---------MRGLPFK 263
Query: 310 ATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRL 369
A + + E FS V+ + V++K + S G A+V ++ +A++ + QGR
Sbjct: 264 AKDKHILEFFSPLKPVA-IRFVMNKKGQPS-GCAFVDFSSKSDLEKALK-RNKDYLQGRY 320
Query: 370 LHVM 373
+ +
Sbjct: 321 IELF 324
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASRAIEV 359
+ VRN+P+ AT E+RE FS FG + + + T +G A+V + + A RA E
Sbjct: 763 ILVRNVPFEATTKEIRELFSTFGEIKTLRLPKKMTGTGPHRGFAFVDFLTKQDAKRAFEA 822
Query: 360 LDNSI-FQGRLL 370
L S GR L
Sbjct: 823 LCTSTHLYGRRL 834
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAIKY 60
I V+N+P T +R+ FS GEI +L + T G R FAF+ F T+Q+A+ A +
Sbjct: 763 ILVRNVPFEATTKEIRELFSTFGEIKTLRLPKKMTGTGPHRGFAFVDFLTKQDAKRAFEA 822
Query: 61 FNKS-YLDTCRISCEIA 76
S +L R+ E A
Sbjct: 823 LCTSTHLYGRRLVLEWA 839
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEAAAAFKGL 550
LV+N+P++++ E+ ++F FG + + LP T A V FL +A AF+ L
Sbjct: 764 LVRNVPFEATTKEIRELFSTFGEIKTLRLPKKMTGTGPHRGFAFVDFLTKQDAKRAFEAL 823
Query: 551 AYKRY-KGVPLYLEWA 565
+ G L LEWA
Sbjct: 824 CTSTHLYGRRLVLEWA 839
>gi|336262864|ref|XP_003346214.1| hypothetical protein SMAC_05751 [Sordaria macrospora k-hell]
gi|380093543|emb|CCC08506.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 836
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 229/771 (29%), Positives = 372/771 (48%), Gaps = 91/771 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI VKNLP +TE R FS +G ++TD KL+ +R F+G+++ ++A A+K
Sbjct: 5 SRIFVKNLPPTITEAEFRKHFSAEGRQVTDVKLI-----PARHIGFVGYKSAEDAARAVK 59
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMP--RPWSRYS------------LKKEKEVSEDEKN 105
YFN+S++ RI+ +IA+ + D ++P + SR + EV+
Sbjct: 60 YFNRSFIRMSRIAVDIAKPIAD-SIPHHKSASRVPSKDVDPKNAPKVIPPNTEVAAAAVP 118
Query: 106 PVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENI 165
V A K+ ++ + + DP+L E+L VM KM + L V E +
Sbjct: 119 KVEVAPDAPKRKLDAL-DAADPKLQEYLDVMGAHPSKKMRNAEGL-------PITVDEVL 170
Query: 166 SQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYF----KSRVKKDWS 221
+ A+ G + + ++ T +Q T AD+ M D S
Sbjct: 171 APAVPAGLEDGESDDEYEEIPARTQNQPTH-----IADQEMVDAPPVAGVESSATPAAVE 225
Query: 222 DSESEDDSAGDDDDDD-------------DGEEEEEEENDHNGDSNEECDSIIKDSIHSG 268
SES + D DDD D ++ + ++++ +
Sbjct: 226 PSESAPPVSLDATDDDWLRSRTNRLLDLVDPDDAALALRPAAAAPAPVPATSVENTASAK 285
Query: 269 VGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEV 328
E A+G G + + ++ RLF+RNL YT TED++REHF+KFG + EV
Sbjct: 286 AEEHPADGSKATTGATKQDPESAISLIEKTSRLFLRNLSYTVTEDDVREHFAKFGTLEEV 345
Query: 329 HIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHN 388
H+ +D RSKG A + Y P SA A + D ++FQGR+ H++PA K+ + E
Sbjct: 346 HVPLDSK-GRSKGFAMIRYEKPASAIAAFQT-DGTVFQGRIAHILPAAAKRENKLDEFAL 403
Query: 389 STSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN 448
S K ++++ RK +EA+ +T WNSLFM D V +A + GVSK++LLD
Sbjct: 404 S-----KLPLKKQQLLRKKAEAASSTFNWNSLFMSQDAVNTAMAERLGVSKAELLDPTDA 458
Query: 449 DLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSE 508
AV+ A+ ET VI E K+ GVN+ + KT +R + LVKN+ + E
Sbjct: 459 SAAVKQAVAETTVIQEAKQYFAANGVNIEAF------KTQ--QRGDTTILVKNIKNTTIE 510
Query: 509 GELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSD 568
EL +F + G++ +V++P + T+A+V F +PV+ AF AY R+K L+LE P
Sbjct: 511 -ELRTLFEEHGTVLRVLMPPSGTIAIVQFAQPVQCRTAFARKAYSRFKDSVLFLEKGPKG 569
Query: 569 VLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTC 628
+ + + + + V + + LLE+ D + +E+ SLFV+NLNF T
Sbjct: 570 LFTDNVAAPTEARPAGV--QKPSVADLLERD-------DAEEQSLETSSLFVRNLNFSTT 620
Query: 629 DENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGT 685
+ L F +H+ +G ++ KVK K G+ +SMGFGF+ F + + A + + G
Sbjct: 621 SQGLTDAF-KHL-DG-FVNAKVKTKTDPKKPGQVLSMGFGFVAFRTKDQAQAAQKVMDGH 677
Query: 686 ILDGHALILQLCH-------AKKDEQVVKKAEKDKSSTKLLVRNVAFEAQR 729
+L+ H L ++ H ++ E + KKA TKL+++N+ FE +
Sbjct: 678 VLEAHKLSVKASHRGLDAAEERRREDMAKKAA--SQGTKLVIKNLPFEVTK 726
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFG-NVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
S R+FV+NLP T TE E R+HFS G V++V ++ ++ I +V Y E A+RA
Sbjct: 4 SSRIFVKNLPPTITEAEFRKHFSAEGRQVTDVKLI------PARHIGFVGYKSAEDAARA 57
Query: 357 IEVLDNSIFQ 366
++ + S +
Sbjct: 58 VKYFNRSFIR 67
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ +KNLP VT++ +R FS G++ ++ + + SR FAF F T +EA A
Sbjct: 713 TKLVIKNLPFEVTKNEVRTLFSTYGKLVALRIPKKFNQSSRGFAFAEFSTAKEALNAFTS 772
Query: 61 FNKSYLDTCRISCEIAR 77
+++ R+ + A+
Sbjct: 773 LKDTHILGRRLVIDFAQ 789
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
L +KNL F+ +R F + G+++++++ K S GF F EF + + A N
Sbjct: 715 LVIKNLPFEVTKNEVRTLFSTY---GKLVALRIPKKFNQS---SRGFAFAEFSTAKEALN 768
Query: 678 VCRDLQGTILDGHALILQLCHA 699
L+ T + G L++ A
Sbjct: 769 AFTSLKDTHILGRRLVIDFAQA 790
>gi|340382975|ref|XP_003389993.1| PREDICTED: probable RNA-binding protein 19-like [Amphimedon
queenslandica]
Length = 866
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 180/452 (39%), Positives = 256/452 (56%), Gaps = 52/452 (11%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ +SGR+F+RNLPYT TE+EL E F ++G +SE++++VDK T S G+ YV + PE A
Sbjct: 347 IADSGRIFIRNLPYTTTEEELTELFEEYGQLSEINLLVDKSTGSSIGLGYVTFMFPEHAV 406
Query: 355 RAIEVLDNSIFQGRLLHVMPAR--HKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG 412
+A LD +FQGRLLH++P++ +K+ + + T + KQ+ E+ SEA G
Sbjct: 407 KAFSELDGQVFQGRLLHLLPSKPPNKEVGVVKSIEPETQSSSFKSKQK---EKLKSEA-G 462
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN-DLAVRIALGETQVIAETKKALTN 471
++ WN+LF+ + V ++ A + GV KS+LLD + LAVR+ALGETQ++ ET++ L +
Sbjct: 463 SSHNWNTLFLGSNAVADSTADQFGVRKSELLDLDTTQSLAVRLALGETQLVNETREFLES 522
Query: 472 AGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT 531
GV ++S + T KRS +V LVKNLP+ +S EL ++F FGSL +VILP
Sbjct: 523 HGVKLNSFDTEENELTR--KRSKNVILVKNLPFGTSTKELTELFAPFGSLSRVILPPAGI 580
Query: 532 LALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDA 591
ALV + A AFK L+Y +K +PLYLEWAP V+S GE
Sbjct: 581 SALVEYSSSSNAKVAFKKLSYCEFKHLPLYLEWAPFGVMS---------------GEPS- 624
Query: 592 KRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVK 651
Q ++ A+ ES S+FVKNLNF T D+ L HF E + G ++S KV
Sbjct: 625 ------QPVKDTGKAE------ESSSIFVKNLNFSTTDDGLSSHFKERV--GGVVSAKVS 670
Query: 652 KHLK----NGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKK------ 701
K G ++SMGFGF+ F S A ++LQ ++LDGH L LQL H+
Sbjct: 671 KKYTPKAGGGASLSMGFGFVTFSSKTAALKALKELQSSLLDGHKLELQLSHSAPSVSDAA 730
Query: 702 ---DEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+V K K+L+RNV FEA RK
Sbjct: 731 SATSHKVTKSLMPKGPKNKILIRNVPFEASRK 762
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 63/92 (68%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP T L++ FS+ G+ITD KLM T+ G R+FAF+G+ A+E+IKY
Sbjct: 3 SRVIVKNLPSKATSKELKEHFSKCGQITDVKLMYTRSGTFRRFAFVGYSDSFSAQESIKY 62
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
FN +Y+ T +I A+ GD ++PRPWSRYS
Sbjct: 63 FNNTYIGTSKIQVIEAKSFGDSSIPRPWSRYS 94
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S R+ V+NLP AT EL+EHFSK G +++V ++ + + A+V Y+ SA +I
Sbjct: 2 SSRVIVKNLPSKATSKELKEHFSKCGQITDVKLMYTRSGTFRR-FAFVGYSDSFSAQESI 60
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
+ +N+ + V+ A+ S + S G+ T Q E++RK+++ S
Sbjct: 61 KYFNNTYIGTSKIQVIEAKSFGDSSIPRPWSRYSTGSST-NQIYEKKRKSTKDS 113
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 285 SSSSKDVQQEVLESG---RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS-K 340
S++S V + ++ G ++ +RN+P+ A+ EL + S FG + + + ++ S +
Sbjct: 731 SATSHKVTKSLMPKGPKNKILIRNVPFEASRKELSQLLSTFGKIKNLRLPKKQNEPNSHR 790
Query: 341 GIAYVLYAIPESASRAIEVL-DNSIFQGRLL 370
G +V Y+ E A A E L D++ GR L
Sbjct: 791 GFCFVEYSTTEDARSAFESLADSTHLYGRRL 821
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPVEAAAAFKGL 550
L++N+P+++S EL+++ FG + + LP S + V + +A +AF+ L
Sbjct: 751 LIRNVPFEASRKELSQLLSTFGKIKNLRLPKKQNEPNSHRGFCFVEYSTTEDARSAFESL 810
Query: 551 A-YKRYKGVPLYLEWAPSD 568
A G L LEWA D
Sbjct: 811 ADSTHLYGRRLVLEWAEGD 829
>gi|254580399|ref|XP_002496185.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
gi|238939076|emb|CAR27252.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
Length = 866
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 177/448 (39%), Positives = 265/448 (59%), Gaps = 28/448 (6%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+++ E+GRLF+RN+ Y +TED+ +E F KFG + EVHI +D T +SKG AYV + P+
Sbjct: 325 EKISETGRLFLRNILYGSTEDDFKELFGKFGELEEVHIALDTRTGQSKGFAYVQFKDPKD 384
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQRREEERKASEA 410
A A LD IFQGRLLH++PA +K+ D+ ++ N LK++RE +RKA+ A
Sbjct: 385 AVEAYIELDKQIFQGRLLHILPANSQKNHRLDEFDMKNL------PLKKQRELKRKAT-A 437
Query: 411 SGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALT 470
S T AWNSL+M D V+ ++A K G+ KS L+D E + AV+ AL E VI + +K
Sbjct: 438 SKQTFAWNSLYMNQDAVLGSVAAKLGMQKSQLIDPENSSSAVKQALAEAHVIGDVRKYFE 497
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV+++ ++ K+ G +R + V LVKN PY ++ EL ++F FG L++ ++P
Sbjct: 498 SKGVDLAKFDQL---KSPG-QRDDRVILVKNFPYGTTVEELGELFLPFGKLERFLMPPAG 553
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTS----KGNQKNDAVV 586
T+A++ + + A AAF LAYKR+K +YLE P D ++ + + +G++K + V
Sbjct: 554 TIAIIQYRDVTSARAAFSKLAYKRFKDGIIYLEKGPKDCFTRDAQTDERMEGSEKPEVV- 612
Query: 587 GEHDAKRALLEQQLEGVTDADIDPDRVE--SRSLFVKNLNFKTCDENLRKHFGEHIKEGR 644
+AK + + T A+ D D E + S+FVKNLNF T + L + F +G
Sbjct: 613 --KEAKPSAEDIMNTDDTQAEAD-DGFEGPTASIFVKNLNFATTTQQLAEKFKPF--DGF 667
Query: 645 ILS-VKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD 702
+++ VK K N GK +SMGFGF+EF S A V L GT LDGH L L+L H +
Sbjct: 668 VVAQVKTKPDPSNTGKVLSMGFGFVEFKSRAQAVAVINALDGTALDGHKLQLKLSHRQGG 727
Query: 703 EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
K + KS K++V+N+ FEA RK
Sbjct: 728 STNAPKQTRKKSG-KIIVKNLPFEAARK 754
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG++ V+NLP+ A ++ E FS FG + V V K K ++G A+V + +P+ A A+
Sbjct: 739 SGKIIVKNLPFEAARKDVFELFSSFGQLKSVR-VPKKFDKSARGFAFVEFLLPKEAENAM 797
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
+ L GR L + A+ ++E+ T+ + KQ+ E A SG +
Sbjct: 798 DQLQGVHLLGRRLVMQYAQEDAEDAEEEIRRMTN---RVKKQQASREYGAIRNSGGRR 852
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAA 545
K+S + +VKNLP++++ ++ ++F FG L V +P S + A V FL P EA
Sbjct: 737 KKSGKI-IVKNLPFEAARKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAEN 795
Query: 546 AFKGLAYKRYKGVPLYLEWA 565
A L G L +++A
Sbjct: 796 AMDQLQGVHLLGRRLVMQYA 815
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
R +S + VKNL F+ +++ + F G++ SV+V K + GF F+EF
Sbjct: 736 RKKSGKIIVKNLPFEAARKDVFELFSSF---GQLKSVRVPKKFDKS---ARGFAFVEFLL 789
Query: 672 VETATNVCRDLQGTILDGHALILQLCH 698
+ A N LQG L G L++Q
Sbjct: 790 PKEAENAMDQLQGVHLLGRRLVMQYAQ 816
>gi|367052423|ref|XP_003656590.1| hypothetical protein THITE_135180 [Thielavia terrestris NRRL 8126]
gi|347003855|gb|AEO70254.1| hypothetical protein THITE_135180 [Thielavia terrestris NRRL 8126]
Length = 2006
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 237/780 (30%), Positives = 358/780 (45%), Gaps = 100/780 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI VKNLP ++E R FS +G E+TD KL+ R+ F+G+++ +A A+K
Sbjct: 15 SRIFVKNLPPTISEAEFRKHFSAQGREVTDVKLI-----PHRRIGFVGYKSHDDAARAVK 69
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGE----- 114
YFNKS++ RI+ ++A+ + D ++PR + + + +P A R E
Sbjct: 70 YFNKSFIRMSRIAVDLAKPIAD-SIPRQTPKATPGNGIATT---SSPGAGAPRVEHVEEE 125
Query: 115 --KKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGG 172
KK + DP+L E+L+VM R K GL +D V + +A +
Sbjct: 126 NAKKRKRADLDEADPKLQEYLEVMGHRTKKPRDKGTLNGGLESDLTTAVPPAVFEAGESD 185
Query: 173 EKSITLHVKSDKSNV--------ITDSQATEKSKNAAADELMS----------------- 207
E+ + + K V T + T+ AAA + S
Sbjct: 186 EEYEEIPARRSKQPVQGNPARLDATAAPVTDGENPAAAPRVESAPRVESARETTHVSADA 245
Query: 208 -DMDYFKSRVKK-----DWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSII 261
D D+ +SR + D D + CD
Sbjct: 246 TDEDWLRSRTSRLLDLVDPDDPGFSARPPPPAPAPVPASAPGPAASSAAEPQESPCDGGA 305
Query: 262 KDSIH-SGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFS 320
DS SG E+ +D + V ++ RLF+RNL YT TED++REHF
Sbjct: 306 SDSNEPSGAAHAHTLAEV---------GEDAAKLVEKTARLFLRNLSYTVTEDDIREHFG 356
Query: 321 KFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKS 380
KFG + EV++ +D R KG A + Y P +A A + D S FQGR++H++PA K+
Sbjct: 357 KFGVLEEVNLPLDAH-GRGKGFAMIRYEQPAAALAAFQT-DGSTFQGRIIHILPAAAKRE 414
Query: 381 SDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKS 440
E S K +K +EA+ +T WNSL+M D V +A + GVSK
Sbjct: 415 HKLDEFAISNLPLKKQ-----RLLKKKAEAASSTFNWNSLYMSQDAVNTAVAERLGVSKH 469
Query: 441 DLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVK 500
+LLD AV+ A+ ET VI E K GVN+ + + G T LVK
Sbjct: 470 ELLDPTDASAAVKQAIAETTVIQEAKTYFAAHGVNIEAFKSQQRGDT--------CILVK 521
Query: 501 NLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPL 560
N+ ++S E+ +F + GS+ +V++P + T+A+V F +P AAF AY R+K L
Sbjct: 522 NI-RNASIEEVRSLFEEHGSVLRVLMPPSGTIAIVQFSQPAACRAAFAKKAYSRFKDSVL 580
Query: 561 YLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFV 620
+LE P KG ++A E D + + + + D D++E+ SLFV
Sbjct: 581 FLEKGP----------KGLFVDNAAPAE-DRPAGVQKPSVADLLARDDAEDQLETTSLFV 629
Query: 621 KNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATN 677
+NLNF T E L K F +G +S KVK + G+ +SMGFGF F S E A
Sbjct: 630 RNLNFSTTSEGLAKAF--QPLDG-FVSAKVKTKTDPKRPGQVLSMGFGFCAFKSKEQAQA 686
Query: 678 VCRDLQGTILDGHALILQLCHAKKD-------EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ + G +LDGH L+++ H D E + KKA + TK++++N+ FEA +K
Sbjct: 687 ALKVMDGYVLDGHKLVVRASHRGHDAAEERRREDLAKKAAAQR--TKIVIKNLPFEASKK 744
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 287 SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGN-VSEVHIVVDKDTKRSKGIAYV 345
SSK ++ +ES R+FV+NLP T +E E R+HFS G V++V ++ + I +V
Sbjct: 3 SSKRMETTTMESSRIFVKNLPPTISEAEFRKHFSAQGREVTDVKLIPHRR------IGFV 56
Query: 346 LYAIPESASRAIEVLDNSIFQGRLLHV---------MPARHKKSSDKQELHNSTSQGTKT 396
Y + A+RA++ + S + + V +P + K++ + ++S G
Sbjct: 57 GYKSHDDAARAVKYFNKSFIRMSRIAVDLAKPIADSIPRQTPKATPGNGIATTSSPGAGA 116
Query: 397 LKQRREEERKA 407
+ EE A
Sbjct: 117 PRVEHVEEENA 127
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R F E+ G+++++++ K + S GF F EF + A N
Sbjct: 732 IVIKNLPFEASKKDVRNLFSEY---GKLVALRLPKKFNH---TSRGFAFAEFATPREALN 785
Query: 678 VCRDLQGTILDGHALILQLCHAKK--DEQVVKKAEKD--KSSTKLLVRNVAFEAQRK 730
L+ T L G L+L A + E+ +K EK K+ ++ + E +RK
Sbjct: 786 ALTALKDTHLLGRRLVLDFAEADEVDPEEQIKAMEKKIRGQVNKVTLQQLTGEGRRK 842
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP ++ +R+ FS+ G++ +L + + SR FAF F T +EA A+
Sbjct: 730 TKIVIKNLPFEASKKDVRNLFSEYGKLVALRLPKKFNHTSRGFAFAEFATPREALNALTA 789
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ + A
Sbjct: 790 LKDTHLLGRRLVLDFA 805
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ A++ ++R FS++G + + + K S+G A+ +A P A A+
Sbjct: 731 KIVIKNLPFEASKKDVRNLFSEYGKLVALRL-PKKFNHTSRGFAFAEFATPREALNALTA 789
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 790 LKDTHLLGRRL 800
>gi|395833986|ref|XP_003789998.1| PREDICTED: probable RNA-binding protein 19 [Otolemur garnettii]
Length = 959
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 171/467 (36%), Positives = 268/467 (57%), Gaps = 50/467 (10%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLFVRNLPYT+TE++L + FSKFG +SE+H +D K+ KG A+V + PE
Sbjct: 395 EEDLADSGRLFVRNLPYTSTEEDLEKLFSKFGPLSEIHYPIDSLIKKPKGFAFVTFMFPE 454
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A +D +FQGR+LHV+P+ KK + + ++++ G+ K++ +++ +S +S
Sbjct: 455 HAVKAYTEVDGQVFQGRMLHVLPSTIKKEASE----DASAPGSSYKKKKEAKDKASSSSS 510
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALT 470
N WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++ L
Sbjct: 511 HN---WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLI 567
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV + S + +A +RS V LVKNLP + EL + FG FGSL +V+LP
Sbjct: 568 DNGVCLDSFSQAAA------ERSKTVILVKNLPAGTLAAELQETFGHFGSLGRVLLPEGG 621
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHD 590
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V S ++ K + DA
Sbjct: 622 ITAIVEFLEPLEARKAFRNLAYSKFHHVPLYLEWAPVCVFSSAAPQK-KESEDAT--SEP 678
Query: 591 AKRALLE-------------QQLEGVTD------------ADIDPDRVESRSLFVKNLNF 625
A++ +E + EG D + + + + +LF+KNLNF
Sbjct: 679 AEKDKIEPKPVPDSETPESGKPTEGGLDNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNF 738
Query: 626 KTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQG 684
T +E L+ F K G + S + KK K G +SMGFGF+E+ E A + QG
Sbjct: 739 DTTEETLKNVFS---KVGMVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKALKQPQG 795
Query: 685 TILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEA 727
++D H L +++ + K+ K ++++K+LVRN+ F+A
Sbjct: 796 LVVDNHKLEVRISERATKPALTSARKKQVSKKQTTSKILVRNIPFQA 842
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 123/225 (54%), Gaps = 20/225 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TK+GK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKEGKFRKFGFIGFKSEEEAQTALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS--------LKKEKEVSEDEKNPVLAAKR 112
FNKS++DT RI+ E + GDP PR WS+++ L K+ V E +K
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPTKPRAWSKHAQKPSQSQQLPKDSFVPESKKGDKKKKVA 121
Query: 113 GEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSEN-ISQAIKG 171
G+ +EK+ E D + EFL V Q R ++ WAND L ++ + K +++ ++
Sbjct: 122 GD---LEKLKE--DSEFQEFLSVHQRRTQAATWANDALDAELSKGRGKPAKDYLNFDSDS 176
Query: 172 GEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRV 216
G++S ++ + AA + +SDMDY KS++
Sbjct: 177 GQES------EEEGAGEDLEEEGGLEPKAAVQKELSDMDYLKSKM 215
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP T V FL +A
Sbjct: 827 KQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDA 886
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 887 KRAFNALCHSTHLYGRRLVLEWADSEVTLQT 917
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 831 SKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 890
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASRA 356
+ ++ VRN+P+ A E+RE FS FG + V + T +G +V + + A RA
Sbjct: 830 TSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRA 889
Query: 357 IEVLDNSI-FQGRLL 370
L +S GR L
Sbjct: 890 FNALCHSTHLYGRRL 904
>gi|327282636|ref|XP_003226048.1| PREDICTED: probable RNA-binding protein 19-like isoform 2 [Anolis
carolinensis]
Length = 938
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 180/467 (38%), Positives = 265/467 (56%), Gaps = 33/467 (7%)
Query: 280 DPGNPSSSSKDVQQE---VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT 336
DP +K V +E + +SGRLFVRNLPYT+TE++L + FSK+G +SE+H +D T
Sbjct: 377 DPARTWQRTKKVDEEDEDLSDSGRLFVRNLPYTSTEEDLEKLFSKYGPLSEIHFPIDGLT 436
Query: 337 KRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKT 396
K+ KG A+V Y PE A +A +D +FQGR+LHV+P+ KK E + G +
Sbjct: 437 KKPKGFAFVTYMFPEHAVKAFAEVDGQVFQGRMLHVLPSTIKKD----EGESGDDPGASS 492
Query: 397 LKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE-ANDLAVRIA 455
K+++ + KAS +S + WN+LFM + V + +A K+ +KS + D E +AVR+A
Sbjct: 493 YKKQKASKDKASSSSSHN--WNTLFMGVNAVADAVAHKYNATKSQVFDHELKGSVAVRVA 550
Query: 456 LGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMF 515
LGET+++ + ++ L GV SL+ FS ++ RS V LVKNLP + L ++F
Sbjct: 551 LGETELVQKVRQFLLENGV---SLDSFSQAASE---RSKTVILVKNLPAGTEATALEEVF 604
Query: 516 GKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
G +GSL +V+LP A+V FLEP EA AF LAY +++ +PLYLEWAP V S
Sbjct: 605 GAYGSLGRVLLPEGGVTAIVEFLEPTEAKRAFTKLAYSKFRHIPLYLEWAPMGVF--SGP 662
Query: 576 SKGNQKNDAVVGEHDAKRALLEQQLE-------GVTDADIDPDRVESRSLFVKNLNFKTC 628
K +N V E + ++ + E D D D + + +LFVKNLNF T
Sbjct: 663 GKRKPENPGVKKESEGPAETVQMETEKGQIEEEDDEDDDDDEESLPGCTLFVKNLNFNTT 722
Query: 629 DENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTIL 687
+E L++ F K G + S V +K K G +SMGFGF+E+ E A + LQG +
Sbjct: 723 EETLKEVF---TKAGAVKSCTVSRKRDKAGTLLSMGFGFVEYRKPEHAQKALKQLQGCSV 779
Query: 688 DGHALILQLCHAKKDEQV--VKKAE--KDKSSTKLLVRNVAFEAQRK 730
DGH L +++ V +K + K + S+K+LVRN+ F+A K
Sbjct: 780 DGHQLEVKISERAIKSPVTSTRKTQRLKKQKSSKILVRNIPFQATVK 826
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 186/394 (47%), Gaps = 37/394 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + EDR R F+ G +TD L TKDGK R+F FIGF++E +A+ A+ +
Sbjct: 2 SRLIVKNLPSGMKEDRFRGLFAAFGTLTDCALKFTKDGKFRKFGFIGFKSEDDAKAALTH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAK---RGEKKT 117
FNKS++DT R+S E + GDP PR WS++S K EK P +AK E K
Sbjct: 62 FNKSFIDTARVSVEFCKSFGDPQKPRAWSKHSQKP----PATEKVPEKSAKSSGHAEFKQ 117
Query: 118 IEKVTENDDPQ----------LLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQ 167
EK + + P+ +FL+ + R ++ W+NDT +AKV+++
Sbjct: 118 DEKKKKKNQPEDFKKLEGEEAFQDFLEAHKKRSQATTWSNDTKAEEAKKNRAKVTDDYLN 177
Query: 168 AIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESED 227
E ++ N D+ T+ AAA +SDMDY +S+V K+ S S +
Sbjct: 178 -FDSDESESLSEEDAEFGNEDGDAGITQ--GKAAARPELSDMDYLRSKVVKNVESSPSSE 234
Query: 228 DSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSS 287
+ + ++ D+ E EEE + +I + SG GE+ G N ++
Sbjct: 235 EESEAEEVDEKEPSEGEEEEAKPSPGRQAGSGLIAE---SGAGEK-MEGLKKGGANEPTT 290
Query: 288 SKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
S V+ +R P+ TE +RE V+ + IV + ++ G +V +
Sbjct: 291 SYTVK----------LRGAPFNVTEQNVREFLVPLRPVA-IRIVRNAHGNKT-GYVFVDF 338
Query: 348 AIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS 381
E +A++ ++ GR + + H K +
Sbjct: 339 NNEEEVQKALK-RNHEYMGGRYIELFYEEHSKKT 371
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 283 NPSSSSKDVQQ-EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHI---VVDKDTKR 338
+P +S++ Q+ + +S ++ VRN+P+ AT E+RE FS FG + V + +V T R
Sbjct: 795 SPVTSTRKTQRLKKQKSSKILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHR 854
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
G +V + + A +A L +S GR L
Sbjct: 855 --GFGFVDFLTKQDAKQAFNTLCHSTHLYGRRL 885
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P T +R+ FS GE+ +L + G R F F+ F T+Q+A++A
Sbjct: 812 SKILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHRGFGFVDFLTKQDAKQAF 871
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 872 NTLCHSTHLYGRRLVLEWA 890
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 483 SAGKTDGLKRS-NHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLAL 534
S KT LK+ + LV+N+P+ ++ E+ ++F FG L V LP + +
Sbjct: 799 STRKTQRLKKQKSSKILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHRGFGF 858
Query: 535 VVFLEPVEAAAAFKGLAYKRY-KGVPLYLEWA 565
V FL +A AF L + + G L LEWA
Sbjct: 859 VDFLTKQDAKQAFNTLCHSTHLYGRRLVLEWA 890
>gi|395326326|gb|EJF58737.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 831
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 161/439 (36%), Positives = 254/439 (57%), Gaps = 14/439 (3%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+L++ RLF+RNLP+T TEDE+REHF G+V++ H+V+D T++SKG+AYV +A PE A
Sbjct: 263 ILQTSRLFLRNLPFTCTEDEIREHFQAHGDVTQAHLVLDPKTQQSKGLAYVTFAKPEQAV 322
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTK-TLKQRREEERKASEASGN 413
A E LD + FQGRLLHV+PA +K ++ + +G K T+KQ R+ +RKA+ +G
Sbjct: 323 AAYEALDKTSFQGRLLHVLPAVDRKG----KVEDDKGEGKKRTVKQDRDAKRKAT--AGK 376
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAG 473
W L+M D VV +IA + +SK+D+L+ E+++ AV++AL ET VI ETK L G
Sbjct: 377 EFNWAMLYMNSDAVVSSIADRMKISKADILNPESSNAAVKLALAETHVIQETKTFLEQHG 436
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
V++S+L+ +G+ RS+ + LVKN+PY +S ++ +F G L +V++P TLA
Sbjct: 437 VDLSALDPSPSGRRPA--RSDRIILVKNIPYGTSAADVRALFEPHGELRRVLVPPAGTLA 494
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKR 593
+V F+ P E AF+ +AY+R +YLE P + N+ V
Sbjct: 495 VVEFVNPDEGRKAFRAVAYRRMGNSVIYLEKGPEGMFITDEPIADNESAAPAVPVSATGA 554
Query: 594 ALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK- 652
A + E T A + +LFVKNL+F T E L + H+ + ++ K
Sbjct: 555 APIAVADE--TSAANESALSAGTTLFVKNLSFSTTPEKLTQVV-RHLPDFAFARIQTKPD 611
Query: 653 HLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKD 712
+ G +SMG+GF+ F +++ A + + G +LDGH L+++ + + EK
Sbjct: 612 PARPGARLSMGYGFVGFRTLDGARRGLKSMDGMVLDGHKLVVKWAGRGVEGESTADKEKV 671
Query: 713 KS-STKLLVRNVAFEAQRK 730
K+ +TK++V+NV FE +K
Sbjct: 672 KARTTKMIVKNVPFEVTKK 690
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P VT+ +R+ F ++ +L R D ++R FAF+ F T EAE+A
Sbjct: 676 TKMIVKNVPFEVTKKDIRELFGAHAQLKSVRLPRKFDHRTRGFAFLEFTTRHEAEQAYAT 735
Query: 61 FNKSYL 66
++L
Sbjct: 736 LRHTHL 741
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 600 LEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKN 659
+EG + AD + + + + VKN+ F+ +++R+ FG H ++ SV++ + +
Sbjct: 660 VEGESTADKEKVKARTTKMIVKNVPFEVTKKDIRELFGAH---AQLKSVRLPRKFDHR-- 714
Query: 660 VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
+ GF F+EF + A L+ T L G L+L+
Sbjct: 715 -TRGFAFLEFTTRHEAEQAYATLRHTHLLGRHLVLEWA 751
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
+VKN+P++ ++ ++ ++FG L V LP T+ A + F EA A+ L
Sbjct: 678 MIVKNVPFEVTKKDIRELFGAHAQLKSVRLPRKFDHRTRGFAFLEFTTRHEAEQAYATLR 737
Query: 552 YKRYKGVPLYLEWA 565
+ G L LEWA
Sbjct: 738 HTHLLGRHLVLEWA 751
>gi|307180956|gb|EFN68744.1| Probable RNA-binding protein 19 [Camponotus floridanus]
Length = 903
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 164/455 (36%), Positives = 271/455 (59%), Gaps = 37/455 (8%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++ + ESGR+F+RNL YT TED++R+ F K+G +SEV++ VD+ T++ KG V + +PE
Sbjct: 355 EENIAESGRMFIRNLTYTITEDDIRKLFEKYGPLSEVNLPVDRVTRKPKGFGTVTFLMPE 414
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A LD ++ GR+LH++PA+ K S + ++ N T KQ++E + KA+ +
Sbjct: 415 HALKAYSELDGTVLDGRMLHILPAKMKASLEDIDMENL------TYKQKKELQNKAT--A 466
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL--AVRIALGETQVIAETKKAL 469
G++ WN+LF+ + V + IA + +K LL+ +N + AV++ALGETQ+ +TK L
Sbjct: 467 GSSHNWNTLFLGQNAVADAIASCYNTTKEKLLEDGSNGMSAAVKLALGETQLAQDTKAFL 526
Query: 470 TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST 529
GV +++ + A K KRS + L+KNLP + E+ +MF K G L ++++P
Sbjct: 527 EENGVCLNAFNQ--APK----KRSTTIILIKNLPAQTKSSEIREMFAKHGELARIVMPPA 580
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST------SKGNQKND 583
ALV FLEP EA AF LAYK+YK +PLYLEWAP + ++ ++ SK ++
Sbjct: 581 GITALVEFLEPSEARKAFHALAYKKYKHLPLYLEWAPDNSFTRPASKTDMIKSKSRERRK 640
Query: 584 AVVGEHDAKRALLEQQL----EGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEH 639
+AK+ ++ ++ + T D +P ++ +LFVKN+NF T +E L+ +FG
Sbjct: 641 ESTDSKEAKKEIITEESKENEKMHTKEDDEPPEPDT-TLFVKNINFSTTEEQLKDYFG-- 697
Query: 640 IKEGRI--LSVKVKKHLKNGKN-VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL 696
K G + +++ KK +N N +SMG+GF+ + A + LQ ++LDG +L L+
Sbjct: 698 -KCGPLHYITIATKKDPENPTNKLSMGYGFVRYKRKHDADRALKTLQMSVLDGKSLELKR 756
Query: 697 CH--AKKDEQVVKKAEK--DKSSTKLLVRNVAFEA 727
D + V+K K +++S+K+LVRN+ F+A
Sbjct: 757 SERTLMSDVKTVRKKSKVTEQTSSKILVRNIPFQA 791
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 71/92 (77%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLPK VT+ +L++ FS+KG +TD +L TKDGK R+FAFIG++TE++A+ A +
Sbjct: 2 SRLIVKNLPKSVTDTKLKELFSEKGIVTDVQLKYTKDGKFRRFAFIGYKTEEQAKLAESF 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
F+++Y+DTC+I E +GD + PR WS+++
Sbjct: 62 FDQTYIDTCKIFVEQCAALGDSSKPRSWSKHA 93
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
RL V+NLP + T+ +L+E FS+ G V++V + KD K + A++ Y E A A
Sbjct: 2 SRLIVKNLPKSVTDTKLKELFSEKGIVTDVQLKYTKDGKFRR-FAFIGYKTEEQAKLAES 60
Query: 359 VLDNS 363
D +
Sbjct: 61 FFDQT 65
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPST-------KTLALVVFLEPVEAAAAFKGL 550
LV+N+P+ ++ E+ ++F +G L V LP + + + +A AFK L
Sbjct: 783 LVRNIPFQATLQEITELFKSYGELKAVRLPKKLVGTEKHRGFGFIEYYTKTDAKKAFKAL 842
Query: 551 AYKRY-KGVPLYLEWAPSD 568
+ G L LEWA ++
Sbjct: 843 CQSTHLYGRRLVLEWAQAE 861
>gi|391335607|ref|XP_003742181.1| PREDICTED: probable RNA-binding protein 19-like [Metaseiulus
occidentalis]
Length = 836
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 176/464 (37%), Positives = 265/464 (57%), Gaps = 33/464 (7%)
Query: 284 PSSSSKD--VQQEVL-ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
P S+ KD V EV+ ++GRLF+RNLPYT TE+EL + F FG ++E+H+ +D TK+ K
Sbjct: 282 PVSAYKDKEVAPEVVADTGRLFIRNLPYTTTENELEDLFKPFGPIAELHLSIDSITKKPK 341
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
G A+V Y PE A +A + LD + F GRLLH++P K+ + L + G+ +
Sbjct: 342 GFAFVAYVFPEHAMKAHQALDYTTFHGRLLHIIPGLAKQ---EDPLLSKDKAGSSF---K 395
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDR-EANDLAVRIALGET 459
E++ K SG+ +WNSLF+ + V + +A K+ V K LL +AVR+ALGET
Sbjct: 396 TEKQAKLRSQSGSAHSWNSLFLGANAVADVMAEKYSVDKMQLLGAVNGESVAVRMALGET 455
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMF-GKF 518
Q+++ET++ L + GV++S K + +RS + LVKNLP ++ E L +F K
Sbjct: 456 QIVSETREFLESHGVDLSVF------KQNVTERSKTILLVKNLPANTKEITLWDLFDPKK 509
Query: 519 GSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTS-- 576
+ +V+LP + ALV F EP +A +AFK LAY + PLYLEWAP +V S+ +T+
Sbjct: 510 KVVRRVVLPPSGVTALVEFAEPQDARSAFKRLAYTMFMDQPLYLEWAPVNVFSRDATADE 569
Query: 577 ---KGNQKNDAVVGEHDAKRALLEQQLEGVTD-----ADIDPDRVESRSLFVKNLNFKTC 628
++ + G+ D R E Q + V D +P+ E LFVKNLNF T
Sbjct: 570 ATRPSDELDTGTAGDGDDGRN--EAQTQSVVDEVGGAGSEEPE--EGSVLFVKNLNFSTT 625
Query: 629 DENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILD 688
++ L++HF + + + GK +SMG+GF++F S + A + LQ + LD
Sbjct: 626 NDVLQRHFSKCATVVQATVATKSDPRQPGKTLSMGYGFVQFKSKQDAMMALKKLQHSTLD 685
Query: 689 GHALILQLCHAK-KDEQVVKKAEK-DKSSTKLLVRNVAFEAQRK 730
H L L++ + K V +K +K K+STK+LVRNV F+A RK
Sbjct: 686 SHTLGLKVSRREVKAAGVERKTQKLGKASTKILVRNVPFQANRK 729
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 93/166 (56%), Gaps = 23/166 (13%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
R+ VKN PK TE+++RDFFS KG +TD L T +GK R+F FIGF + EAEEA KYF
Sbjct: 4 RLFVKNFPKEATENKIRDFFSSKGTVTDVALKFTPEGKFRRFGFIGFASSNEAEEAQKYF 63
Query: 62 NKSYLDTCRISCEIARKVGDPNMPRPWSRYS-------------LKKEKEVSEDEKNPVL 108
+K+++ T R+ EI++++ + PRPWS+YS K++ E E E+ L
Sbjct: 64 DKTFMGTSRLHVEISKELAE--KPRPWSKYSEGSTAYLKTHPEEAKQKAEQLETERKEKL 121
Query: 109 AAK--RGEKKTIEKVTENDDPQ----LLEFLQVMQPRVKSKMWAND 148
+ R EKK K D P+ EFL V Q + +W ND
Sbjct: 122 EKERIRREKKDFLKEVFGDVPEEDEKFKEFLAVNQS--EKLVWTND 165
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 473 GVNVSSLEEFSAG---KTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-- 527
G+ VS E +AG KT L +++ LV+N+P+ ++ E+ ++F FG L V LP
Sbjct: 690 GLKVSRREVKAAGVERKTQKLGKASTKILVRNVPFQANRKEIFELFAVFGELKTVRLPKK 749
Query: 528 -------STKTLALVVFLEPVEAAAAFKGLAYKRY-KGVPLYLEWA 565
S + A V F+ +A AF L + G L LEWA
Sbjct: 750 MFGGDSGSHRGFAFVEFITKSDAKRAFDSLCQSTHLYGRRLVLEWA 795
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 175/433 (40%), Gaps = 69/433 (15%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S RLFV+N P ATE+++R+ FS G V++V + + K + ++ +A A A
Sbjct: 2 SCRLFVKNFPKEATENKIRDFFSSKGTVTDVALKFTPEGKFRR-FGFIGFASSNEAEEAQ 60
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQG-TKTLKQRREEERKASEASGNTKA 416
+ D + LHV + K+ ++K + S+G T LK EE ++ +E +
Sbjct: 61 KYFDKTFMGTSRLHVEIS--KELAEKPRPWSKYSEGSTAYLKTHPEEAKQKAEQLETER- 117
Query: 417 WNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVR-------IALGETQVIAETK--- 466
+ E I R+ K D L D+ +A+ +++ + T
Sbjct: 118 ------KEKLEKERIRRE----KKDFLKEVFGDVPEEDEKFKEFLAVNQSEKLVWTNDEA 167
Query: 467 KALTNAGVNVSSLEEFSAGKTDGLKR-----SNHVFLVKNLPYDSSEGELAKMFGKFG-- 519
K T+AG + E+ D K+ HV +V+NL + +L F
Sbjct: 168 KQETSAGTTHTD-EDPPCEVNDSDKKLPKEIFPHVVVVRNLSFKWKRKDLKSFFKGLSVC 226
Query: 520 SLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGN 579
S+ K + K +A V F E E GL ++E VL S +K
Sbjct: 227 SIRKCLRAGVKGVAYVAF-ETEEDLKEALGLD-------KCFMERRQVRVLKHSDRTKET 278
Query: 580 QKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRV-ESRSLFVKNLNFKTCD---ENLRKH 635
Q E+ + D ++ P+ V ++ LF++NL + T + E+L K
Sbjct: 279 Q----------------EKPVSAYKDKEVAPEVVADTGRLFIRNLPYTTTENELEDLFKP 322
Query: 636 FGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
FG I E L + + K K GF F+ + E A + L T G L +
Sbjct: 323 FGP-IAE---LHLSIDSITKKPK----GFAFVAYVFPEHAMKAHQALDYTTFHGRLLHII 374
Query: 696 LCHAKKDEQVVKK 708
AK+++ ++ K
Sbjct: 375 PGLAKQEDPLLSK 387
>gi|189235137|ref|XP_001807432.1| PREDICTED: similar to RBD protein [Tribolium castaneum]
gi|270003801|gb|EFA00249.1| hypothetical protein TcasGA2_TC003078 [Tribolium castaneum]
Length = 840
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 174/446 (39%), Positives = 257/446 (57%), Gaps = 32/446 (7%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ E+G++FVRNL YT TED++ FSKFG ++EV++ VD +K+ KG V + +PE
Sbjct: 322 EEDIAETGKIFVRNLAYTTTEDDVENLFSKFGPLAEVNLPVDPTSKKIKGFGTVTFVMPE 381
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A+RA LD SI GR++H++P + K +D+ +L ST+ K +++ E +
Sbjct: 382 HAARAYGELDGSILHGRMVHLLPGKSKDVADEPDLEESTNFKKKKEAKQKSE-------A 434
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD-REANDLAVRIALGETQVIAETKKALT 470
G++ WNSLF+ + V E IA + SK ++ + AVR+ALGETQ++A+T+K L
Sbjct: 435 GSSHNWNSLFLGHNAVAEVIADTYSTSKEKVMGLHDDGSAAVRLALGETQIVAQTRKYLE 494
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
GV L+ FS K KRS V LVKNLP + E+ +F KFG + ++ILP +
Sbjct: 495 QEGVQ---LDAFSNNKC---KRSKTVILVKNLPNKTEAKEIRTIFEKFGLVGRLILPPSG 548
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHD 590
A+V FLEP EA AF LAY ++K VPLYLEWAP + L G +K V E
Sbjct: 549 ITAIVEFLEPSEARKAFTCLAYTKFKNVPLYLEWAPENSL-------GERKEPPVTNEDT 601
Query: 591 AKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV 650
+ ++Q + + +LFVKNLNF+T D+ LRKHF E + SV
Sbjct: 602 TE---VKQSENNNEVEETVEESEPDTTLFVKNLNFQTTDDGLRKHF-ESCGKLAYASVAT 657
Query: 651 KKHLKN--GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH--AKKDEQVV 706
KK KN K +SMG+GF+ F +A + LQ + LDG +L L+ + +VV
Sbjct: 658 KKD-KNDPSKRLSMGYGFVRFIHKSSADKALKTLQQSTLDGKSLELKRSERTLNNEVKVV 716
Query: 707 KKAEK--DKSSTKLLVRNVAFEAQRK 730
KK+ K ++ TK+LVRN+ F+A +K
Sbjct: 717 KKSTKATKQTGTKILVRNIPFQANQK 742
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 94/154 (61%), Gaps = 10/154 (6%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLPK +TE++LR+ F +KG ITD +L T +GK R+FAF+G++ E EA+EAIK+
Sbjct: 2 SRLVVKNLPKNITEEKLRNLFQEKGTITDVQLKYTPEGKFREFAFVGYQNENEAQEAIKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRY-----SLKKEKEV---SEDEKNPVLAAK- 111
F+ ++ T +I E +GD P+ WS+Y + KK + ED P +A K
Sbjct: 62 FDGMFMHTRKIKVEPCALLGDSKKPKAWSKYAPESTAYKKAHGILTKEEDNDKPKVAKKN 121
Query: 112 RGEKKTIEKVTE-NDDPQLLEFLQVMQPRVKSKM 144
+ E +TIE + + DDP EFL++ P K+
Sbjct: 122 QKEDETIELLKKYQDDPMFEEFLELHNPEESKKL 155
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 123/312 (39%), Gaps = 60/312 (19%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP E+R F KFG V + + T A V + P A +A L
Sbjct: 515 ILVKNLPNKTEAKEIRTIFEKFGLVGRLILPPSGIT------AIVEFLEPSEARKAFTCL 568
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ F+ L++ A +++E T++ T +KQ +
Sbjct: 569 AYTKFKNVPLYLEWAPENSLGERKE-PPVTNEDTTEVKQSENNNEVEETVEESE------ 621
Query: 421 FMRPDTV--VENI--------ARKHGVSKSDL------LDREANDLAVRIALGETQVIAE 464
PDT V+N+ RKH S L ++ ND + R+++G V
Sbjct: 622 ---PDTTLFVKNLNFQTTDDGLRKHFESCGKLAYASVATKKDKNDPSKRLSMGYGFVRFI 678
Query: 465 TK-------KALTNAGVNVSSLE------------EFSAGKTDGLKRSNHVFLVKNLPYD 505
K K L + ++ SLE + T K++ LV+N+P+
Sbjct: 679 HKSSADKALKTLQQSTLDGKSLELKRSERTLNNEVKVVKKSTKATKQTGTKILVRNIPFQ 738
Query: 506 SSEGELAKMFGKFGSLDKVILP--------STKTLALVVFLEPVEAAAAFKGLAYKRY-K 556
+++ E+ ++F FG + + LP S + A V F+ +A AF+ L +
Sbjct: 739 ANQKEIRELFSVFGEIKALRLPKKMALDGGSHRGFAFVDFVAASDAKNAFEALCQSTHLY 798
Query: 557 GVPLYLEWAPSD 568
G L LEWA S+
Sbjct: 799 GRRLVLEWASSE 810
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIV--VDKDTKRSKGIAYVLYAIPESASRAI 357
++ VRN+P+ A + E+RE FS FG + + + + D +G A+V + A A
Sbjct: 729 KILVRNIPFQANQKEIRELFSVFGEIKALRLPKKMALDGGSHRGFAFVDFVAASDAKNAF 788
Query: 358 EVLDNSI-FQGRLLHVMPARHKKSSD----KQELHNSTSQGTKTLK 398
E L S GR L + A + S D + H T++ K+ K
Sbjct: 789 EALCQSTHLYGRRLVLEWASSEDSVDDIRKRTAAHFQTTEAVKSKK 834
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL V+NLP TE++LR F + G +++V + + K + A+V Y A AI+
Sbjct: 3 RLVVKNLPKNITEEKLRNLFQEKGTITDVQLKYTPEGK-FREFAFVGYQNENEAQEAIKH 61
Query: 360 LDNSIFQGRLLHVMPA 375
D R + V P
Sbjct: 62 FDGMFMHTRKIKVEPC 77
>gi|213511062|ref|NP_001133976.1| probable RNA-binding protein 19 [Salmo salar]
gi|209156026|gb|ACI34245.1| Probable RNA-binding protein 19 [Salmo salar]
Length = 912
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/438 (39%), Positives = 257/438 (58%), Gaps = 28/438 (6%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
V ESGRLF+RNLPYT TE+EL++ FSK G ++EV +D TK+ KG A+V Y IPE+A
Sbjct: 384 VAESGRLFIRNLPYTCTEEELQDLFSKHGPLAEVVFPIDNLTKKPKGYAFVSYMIPENAV 443
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT 414
A+ LD IFQGR+LH++P S+ K+E +S G + +R+++ K +S ++
Sbjct: 444 TALAQLDGHIFQGRMLHLLP-----STLKKEKADSAHSGPGSSSYKRQKDAKNKASSTSS 498
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALTNAG 473
WN+LF+ V + IA K+ +KS +LD E+ +AVR+ALGETQ++ ET++ L +
Sbjct: 499 HNWNTLFLGTSAVADAIAEKYNTTKSQVLDHESKGSVAVRMALGETQIVQETRQFLLDNH 558
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
V + S + +AG RS VFLVKNLP + L ++F G+L +V+LP A
Sbjct: 559 VCLDSFSQ-AAG-----PRSMSVFLVKNLPAGVTVENLEELFSPHGTLGRVLLPPAGLTA 612
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKR 593
++ +LEP EA AF LAY +++ VPLYLEWAP+ V S + SK + + A+
Sbjct: 613 IIEYLEPTEAKQAFTRLAYSKFQHVPLYLEWAPTGVFSAAMPSKTLTPDPEPTTKTSAQE 672
Query: 594 ALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KK 652
E++ E +LF+KNLNF T +E LR+ F K G + + + KK
Sbjct: 673 EEEEEEEEEEALGS---------TLFIKNLNFTTTEETLRETFS---KCGTLKTCTISKK 720
Query: 653 HLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV---KKA 709
K G+ +SMG+GF+ + + + A R LQ +D H L L++ +V K+A
Sbjct: 721 KDKTGQLLSMGYGFVTYRTQKAAEKAIRQLQHCSVDDHQLELKVSERATKSAIVSRKKQA 780
Query: 710 EKDKSSTKLLVRNVAFEA 727
E+ ++S+K+LVRNV F+A
Sbjct: 781 ERKQTSSKILVRNVPFQA 798
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 37/328 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R ++ F+ G +TD L TK+GK R+F F+GF+TE+ A++A+K+
Sbjct: 2 SRLIVKNLPNGMKEERFKEMFAAFGTLTDCGLKFTKEGKFRKFGFVGFKTEEHADKALKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FNKS++DT R++ E+ + GDP R WS++S + P A + K+ +K
Sbjct: 62 FNKSFVDTSRVTVEMCKSFGDPTKARAWSKHS-----------RGPATAPRENNKEKKKK 110
Query: 121 VTEN------DDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEK 174
+ + DD EF+ V Q R + WANDTL A + + SQ K
Sbjct: 111 ESPSILGKLEDDEGFQEFVSVHQNRNQVSTWANDTLPQSAAPE---TGQGRSQEKKPASD 167
Query: 175 SITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDD 234
L+ + + + + + A +SDM+Y +S+V +++E + +++
Sbjct: 168 DY-LNFDESDEEDVEEEEEDQGADKEALKSGLSDMEYLRSKV------AQTEGAAVEENN 220
Query: 235 DDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQE 294
DD+D E+E +G I+ + + + G+ PG QQE
Sbjct: 221 DDEDAEDEPAAVQQTDGAYGSRDRDCIQRATAPASSLDQSQGKPSKPGK--------QQE 272
Query: 295 VLESGRLFV--RNLPYTATEDELREHFS 320
+ V R P+ E ++RE +
Sbjct: 273 TEPTPEFTVKLRGCPFNVKEQQVREFMT 300
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 118/298 (39%), Gaps = 39/298 (13%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
V+NLP T + L E FS G + V + T A + Y P A +A L
Sbjct: 576 FLVKNLPAGVTVENLEELFSPHGTLGRVLLPPAGLT------AIIEYLEPTEAKQAFTRL 629
Query: 361 DNSIFQGRLLHVMPAR---HKKSSDKQELHNSTSQGTKTLKQRREEERKASE-ASGNTKA 416
S FQ L++ A + + L TKT Q EEE + E A G+T
Sbjct: 630 AYSKFQHVPLYLEWAPTGVFSAAMPSKTLTPDPEPTTKTSAQEEEEEEEEEEEALGSTLF 689
Query: 417 WNSL-FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKA------- 468
+L F + + K G K+ + ++ + +++G V T+KA
Sbjct: 690 IKNLNFTTTEETLRETFSKCGTLKTCTISKKKDKTGQLLSMGYGFVTYRTQKAAEKAIRQ 749
Query: 469 LTNAGVNVSSLEE-----------FSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGK 517
L + V+ LE S K K+++ LV+N+P+ ++ E+ ++F
Sbjct: 750 LQHCSVDDHQLELKVSERATKSAIVSRKKQAERKQTSSKILVRNVPFQATVREIRELFCT 809
Query: 518 FGSLDKVILP---------STKTLALVVFLEPVEAAAAFKGLAYKRY-KGVPLYLEWA 565
FG L V LP + V FL +A AF L + + G L LEWA
Sbjct: 810 FGELKTVRLPKKASGTGTGPHRGFGFVDFLTKQDAKKAFSALCHSTHLYGRRLVLEWA 867
>gi|126324467|ref|XP_001378428.1| PREDICTED: probable RNA-binding protein 19 [Monodelphis domestica]
Length = 969
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 172/460 (37%), Positives = 269/460 (58%), Gaps = 49/460 (10%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+SGRLFVRNLPYT+TE++L + F+K+G +SEVH +D TK+ KG A++ + PE A +A
Sbjct: 387 DSGRLFVRNLPYTSTEEDLEKLFAKYGPLSEVHYPIDGLTKKPKGFAFITFMFPEHAVKA 446
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA 416
+D IFQGR+LH++P S+ K+E S+ + + K+++ + KA+ S +
Sbjct: 447 YAEVDGQIFQGRMLHLLP-----STIKKETSESSDAVSSSYKKKKALKDKANSTSSHN-- 499
Query: 417 WNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALTNAGVN 475
WN+LFM + V + +A+K+ +KS + D E +AVR+ALGET+++ E + L GV+
Sbjct: 500 WNTLFMGTNAVADAVAQKYNATKSQVFDHETKGSVAVRVALGETELVQEVRHFLIKNGVS 559
Query: 476 VSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALV 535
+ S + +AG +RS V LVKNLP + EL ++FG+FGSL +V+LP A+V
Sbjct: 560 LDSFSQ-AAG-----ERSRSVILVKNLPSGTRPSELQELFGRFGSLGRVLLPEGGITAIV 613
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN------------- 582
+LEP+EA F LAY ++ VPLYLEWAP V S + K Q +
Sbjct: 614 EYLEPLEARRGFTSLAYSKFHDVPLYLEWAPIGVFSSHPSPKKEQGDEPGGKEATQSEAG 673
Query: 583 -DAVVGEHDAKRALL--EQQLEGVTDADIDPDR---VESRSLFVKNLNFKTCDENLRKHF 636
D E KRA + E++L+ ++ D D D + +LF+KNLNF T +E L++ F
Sbjct: 674 PDGETTEEAEKRAAVAPEKKLDAPSEEDDDDDDEEGLPGCTLFIKNLNFSTTEETLKEAF 733
Query: 637 GEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
K G++ + + KK K G ++SMGFGF+E+ E A + LQG ++D H L ++
Sbjct: 734 S---KVGKVKNCSISKKKNKAGVSLSMGFGFVEYQKPEQAQKALKQLQGCMVDDHKLEVR 790
Query: 696 LCH--------AKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
+ + + +QV +K + ++K+LVRN+ F+A
Sbjct: 791 ISERAVKPALTSARQKQVARK----QRTSKILVRNIPFQA 826
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 126/226 (55%), Gaps = 20/226 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPSGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQRALDH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLA---------AK 111
F++S++DT R++ E + GDP+ PR WS++S +K + + EK+PV
Sbjct: 62 FHRSFIDTARVTVEFCKSFGDPSKPRAWSKHS-QKTTQPGKPEKSPVAPDTKKDKKKKKA 120
Query: 112 RGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSEN-ISQAIK 170
GE + ++K D + EFL V Q R + WANDT+ +K K S++ ++
Sbjct: 121 TGELEKLKK-----DAEFQEFLMVHQKRTQVATWANDTVGVEPKKEKTKKSDDYLNFDSD 175
Query: 171 GGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRV 216
G++S D + S A + AA + +SDMDY KS+V
Sbjct: 176 SGQESEEEIDDEDSESECACSPAVK----AAEQKELSDMDYLKSKV 217
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKD---TKRSKGIAYVLYAIPES 352
L LF++NL ++ TE+ L+E FSK G V I K+ S G +V Y PE
Sbjct: 710 LPGCTLFIKNLNFSTTEETLKEAFSKVGKVKNCSISKKKNKAGVSLSMGFGFVEYQKPEQ 769
Query: 353 ASRAIEVLDNSI 364
A +A++ L +
Sbjct: 770 AQKALKQLQGCM 781
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFLEPVEAAAAFKGL 550
LV+N+P+ ++ E+ ++F FG L V LP T V FL +A AF L
Sbjct: 818 LVRNIPFQANVREIRELFSTFGELKTVRLPKKMTGTGPHRGFGFVDFLTKQDAKRAFNAL 877
Query: 551 AYKRY-KGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQ 598
+ + G L LEWA ++ Q+ K Q V + ++ A L++
Sbjct: 878 CHSTHLYGRRLVLEWADTEETVQALRRKTAQHFHEVPRKRQSRVAFLDE 926
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTK 337
V P S+ K V ++ S ++ VRN+P+ A E+RE FS FG + V + T
Sbjct: 796 VKPALTSARQKQVARKQRTS-KILVRNIPFQANVREIRELFSTFGELKTVRLPKKMTGTG 854
Query: 338 RSKGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
+G +V + + A RA L +S GR L
Sbjct: 855 PHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRL 888
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 815 SKILVRNIPFQANVREIRELFSTFGELKTVRLPKKMTGTGPHRGFGFVDFLTKQDAKRAF 874
>gi|348686579|gb|EGZ26394.1| hypothetical protein PHYSODRAFT_484800 [Phytophthora sojae]
Length = 768
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/442 (38%), Positives = 258/442 (58%), Gaps = 25/442 (5%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ RLF+RNLP+TA E++L S +G V EVH+ +D +T+R KG +VL+ A A+
Sbjct: 234 TARLFLRNLPFTAVEEDLEALCSTYGPVEEVHMPLD-ETRRRKGYGFVLFRTTVDAQTAL 292
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
L+ FQGR LHV+ AR K+ K + + + T KQR+E ER+ +A T W
Sbjct: 293 TALNGMAFQGRRLHVIFARSKRV--KLDPEAALADPNLTYKQRKELERQI-QAQKKT-GW 348
Query: 418 NSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVS 477
N+ ++R D V ++A + GV + +++D+E ++AVR+A+GET ++ E K GV+++
Sbjct: 349 NASYIRGDATVGSLAERMGVKRGEIMDKEQGNMAVRLAIGETMLVKENKDFFAREGVDLN 408
Query: 478 SLEEFSAGK------TDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT 531
++E K + ++RS V L+KNLP+ + E ELA++F K G + + +LP +KT
Sbjct: 409 AIEGALVKKPSQQQQSKKIERSTTVILIKNLPHTTEEEELAQLFRKHGEIGRFLLPPSKT 468
Query: 532 LALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDA 591
LA+V FLEP EA AF+ LAYK+Y+ VPLYLEWAP V + +T+ + K A E
Sbjct: 469 LAVVEFLEPSEARKAFRSLAYKKYQHVPLYLEWAPVKVFDRPATASSSAK--APTSEQKG 526
Query: 592 KRALLEQQLEGVTDADIDPDRV---ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSV 648
++ V D D + D S ++ VKNLNF T + L K F E + R ++V
Sbjct: 527 ----IKSTSAVVPDVDDEGDTAVGDASHTICVKNLNFTTKEAALEKIF-ERCGKLRKVTV 581
Query: 649 KVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD---EQV 705
+K K G +SMGFGF+E+ + + LQ T++DGHAL L+L K ++
Sbjct: 582 ARRKDPKRGM-LSMGFGFVEYVDAKHTERALQTLQNTVVDGHALNLKLSQKKASAAPKRA 640
Query: 706 VKKAEKDKSSTKLLVRNVAFEA 727
V + + + +K++VRNVAFEA
Sbjct: 641 VGEVDGEGRKSKIIVRNVAFEA 662
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 131/238 (55%), Gaps = 29/238 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDG-KSRQFAFIGFRTEQEAEEAIK 59
+R+ V+NLP YV RLR+ F+ +GE+TDA ++RTKDG KSR+F F+GF++ ++AE+A K
Sbjct: 19 TRLYVQNLPAYVDSARLREHFAAQGEVTDACVIRTKDGSKSRRFGFVGFKSAKQAEQARK 78
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIE 119
+F++S+ DTCRI+ +A +M RPWS+YS + + R +K E
Sbjct: 79 FFHQSFFDTCRINVRVALSKESGDMERPWSKYS---------------VGSGRYQKLHPE 123
Query: 120 K--VTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKGGEKSI 176
VT + EF++ MQ R K+K WAND + G K V ++ + +
Sbjct: 124 SSGVTSG---EFEEFMETMQARSKTKFWANDDVQGPEGKTATKGVGLADAEDSDDEYEEL 180
Query: 177 TLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDD 234
D ++ ++KSK + E MSDMD+ +S KK S E+ D+A +DD
Sbjct: 181 EAAKSDDDADEDEADAESKKSKKS---EAMSDMDFLRS--KKIASSGEA--DAAAEDD 231
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 122/300 (40%), Gaps = 42/300 (14%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ ++NLP+T E+EL + F K G + + SK +A V + P A +A L
Sbjct: 434 ILIKNLPHTTEEEELAQLFRKHGEIGRFLL------PPSKTLAVVEFLEPSEARKAFRSL 487
Query: 361 DNSIFQGRLLHVMPA------RHKKSSDKQELHNSTSQGTKTLKQ-----RREEERKASE 409
+Q L++ A R +S + S +G K+ E + +
Sbjct: 488 AYKKYQHVPLYLEWAPVKVFDRPATASSSAKAPTSEQKGIKSTSAVVPDVDDEGDTAVGD 547
Query: 410 ASGNTKAWNSLFMRPDTVVENIARKHG----VSKSDLLDREANDLAVRIALGETQVIAET 465
AS N F + +E I + G V+ + D + L++ E T
Sbjct: 548 ASHTICVKNLNFTTKEAALEKIFERCGKLRKVTVARRKDPKRGMLSMGFGFVEYVDAKHT 607
Query: 466 KKALTNAGVNV---------------SSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
++AL V S+ + + G+ DG R + + +V+N+ ++++ E
Sbjct: 608 ERALQTLQNTVVDGHALNLKLSQKKASAAPKRAVGEVDGEGRKSKI-IVRNVAFEATSNE 666
Query: 511 LAKMFGKFGSLDKVILPST-----KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
+ ++FG FG L +V +P + A V FL EA AF LA G L LEWA
Sbjct: 667 IRELFGAFGQLKRVRMPKKFDGRHRGFAFVEFLTEQEARNAFSALASSHLYGRHLVLEWA 726
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 135/313 (43%), Gaps = 37/313 (11%)
Query: 285 SSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAY 344
+S+ KD Q+ RL+V+NLP LREHF+ G V++ ++ KD +S+ +
Sbjct: 7 TSAPKDAAQDT--GTRLYVQNLPAYVDSARLREHFAAQGEVTDACVIRTKDGSKSRRFGF 64
Query: 345 VLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRR--- 401
V + + A +A + S F ++V A K+S D + + S G+ ++
Sbjct: 65 VGFKSAKQAEQARKFFHQSFFDTCRINVRVALSKESGDMERPWSKYSVGSGRYQKLHPES 124
Query: 402 --------EEERKASEASGNTKAW-NSLFMRPD--TVVENIARKHGVSKSDLLDREANDL 450
EE + +A TK W N P+ T + + G++ ++ D E +L
Sbjct: 125 SGVTSGEFEEFMETMQARSKTKFWANDDVQGPEGKTATKGV----GLADAEDSDDEYEEL 180
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEF-------SAGKTDGL----KRSNHVFLV 499
+ + ++ + S +F S+G+ D K + +FL
Sbjct: 181 EAAKSDDDADEDEADAESKKSKKSEAMSDMDFLRSKKIASSGEADAAAEDDKPTARLFL- 239
Query: 500 KNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-----LALVVFLEPVEAAAAFKGLAYKR 554
+NLP+ + E +L + +G +++V +P +T V+F V+A A L
Sbjct: 240 RNLPFTAVEEDLEALCSTYGPVEEVHMPLDETRRRKGYGFVLFRTTVDAQTALTALNGMA 299
Query: 555 YKGVPLYLEWAPS 567
++G L++ +A S
Sbjct: 300 FQGRRLHVIFARS 312
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S+I V+N+ T + +R+ F G++ ++ + DG+ R FAF+ F TEQEA A
Sbjct: 651 SKIIVRNVAFEATSNEIRELFGAFGQLKRVRMPKKFDGRHRGFAFVEFLTEQEARNAFSA 710
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPR 86
S+L + E A D + R
Sbjct: 711 LASSHLYGRHLVLEWAEDADDIDTLR 736
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 285 SSSSKDVQQEVLESGR---LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
S++ K EV GR + VRN+ + AT +E+RE F FG + V + D R +G
Sbjct: 634 SAAPKRAVGEVDGEGRKSKIIVRNVAFEATSNEIRELFGAFGQLKRVRMPKKFDG-RHRG 692
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLL 370
A+V + + A A L +S GR L
Sbjct: 693 FAFVEFLTEQEARNAFSALASSHLYGRHL 721
>gi|327282634|ref|XP_003226047.1| PREDICTED: probable RNA-binding protein 19-like isoform 1 [Anolis
carolinensis]
Length = 945
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 181/476 (38%), Positives = 263/476 (55%), Gaps = 44/476 (9%)
Query: 280 DPGNPSSSSKDVQQE---VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT 336
DP +K V +E + +SGRLFVRNLPYT+TE++L + FSK+G +SE+H +D T
Sbjct: 377 DPARTWQRTKKVDEEDEDLSDSGRLFVRNLPYTSTEEDLEKLFSKYGPLSEIHFPIDGLT 436
Query: 337 KRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKT 396
K+ KG A+V Y PE A +A +D +FQGR+LHV+P+ KK E + G +
Sbjct: 437 KKPKGFAFVTYMFPEHAVKAFAEVDGQVFQGRMLHVLPSTIKKD----EGESGDDPGASS 492
Query: 397 LKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE-ANDLAVRIA 455
K+++ + KAS +S + WN+LFM + V + +A K+ +KS + D E +AVR+A
Sbjct: 493 YKKQKASKDKASSSSSHN--WNTLFMGVNAVADAVAHKYNATKSQVFDHELKGSVAVRVA 550
Query: 456 LGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMF 515
LGET+++ + ++ L GV SL+ FS ++ RS V LVKNLP + L ++F
Sbjct: 551 LGETELVQKVRQFLLENGV---SLDSFSQAASE---RSKTVILVKNLPAGTEATALEEVF 604
Query: 516 GKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
G +GSL +V+LP A+V FLEP EA AF LAY +++ +PLYLEWAP V S
Sbjct: 605 GAYGSLGRVLLPEGGVTAIVEFLEPTEAKRAFTKLAYSKFRHIPLYLEWAPMGVFSGPGK 664
Query: 576 SK----------------GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLF 619
K G K D V E + + E + D + P +LF
Sbjct: 665 RKPENPGVKKESEGPAETGGSKVDEVQMETEKGQIEEEDDEDDDDDEESLP----GCTLF 720
Query: 620 VKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNV 678
VKNLNF T +E L++ F K G + S V +K K G +SMGFGF+E+ E A
Sbjct: 721 VKNLNFNTTEETLKEVF---TKAGAVKSCTVSRKRDKAGTLLSMGFGFVEYRKPEHAQKA 777
Query: 679 CRDLQGTILDGHALILQLCHAKKDEQV--VKKAE--KDKSSTKLLVRNVAFEAQRK 730
+ LQG +DGH L +++ V +K + K + S+K+LVRN+ F+A K
Sbjct: 778 LKQLQGCSVDGHQLEVKISERAIKSPVTSTRKTQRLKKQKSSKILVRNIPFQATVK 833
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 122/232 (52%), Gaps = 20/232 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + EDR R F+ G +TD L TKDGK R+F FIGF++E +A+ A+ +
Sbjct: 2 SRLIVKNLPSGMKEDRFRGLFAAFGTLTDCALKFTKDGKFRKFGFIGFKSEDDAKAALTH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAK---RGEKKT 117
FNKS++DT R+S E + GDP PR WS++S K EK P +AK E K
Sbjct: 62 FNKSFIDTARVSVEFCKSFGDPQKPRAWSKHSQKP----PATEKVPEKSAKSSGHAEFKQ 117
Query: 118 IEKVTENDDPQ----------LLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQ 167
EK + + P+ +FL+ + R ++ W+NDT +AKV+++
Sbjct: 118 DEKKKKKNQPEDFKKLEGEEAFQDFLEAHKKRSQATTWSNDTKAEEAKKNRAKVTDDYLN 177
Query: 168 AIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKD 219
E ++ N D+ T+ AAA +SDMDY +S+V K+
Sbjct: 178 -FDSDESESLSEEDAEFGNEDGDAGITQ--GKAAARPELSDMDYLRSKVVKN 226
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 283 NPSSSSKDVQQ-EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHI---VVDKDTKR 338
+P +S++ Q+ + +S ++ VRN+P+ AT E+RE FS FG + V + +V T R
Sbjct: 802 SPVTSTRKTQRLKKQKSSKILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHR 861
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
G +V + + A +A L +S GR L
Sbjct: 862 --GFGFVDFLTKQDAKQAFNTLCHSTHLYGRRL 892
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P T +R+ FS GE+ +L + G R F F+ F T+Q+A++A
Sbjct: 819 SKILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHRGFGFVDFLTKQDAKQAF 878
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 879 NTLCHSTHLYGRRLVLEWA 897
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 483 SAGKTDGLKRS-NHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLAL 534
S KT LK+ + LV+N+P+ ++ E+ ++F FG L V LP + +
Sbjct: 806 STRKTQRLKKQKSSKILVRNIPFQATVKEIRELFSTFGELKTVRLPKKMVGTGTHRGFGF 865
Query: 535 VVFLEPVEAAAAFKGLAYKRY-KGVPLYLEWA 565
V FL +A AF L + + G L LEWA
Sbjct: 866 VDFLTKQDAKQAFNTLCHSTHLYGRRLVLEWA 897
>gi|332024948|gb|EGI65135.1| Putative RNA-binding protein 19 [Acromyrmex echinatior]
Length = 862
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 163/457 (35%), Positives = 260/457 (56%), Gaps = 42/457 (9%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++ + ESGR+F+RNL YT TED++R+ F K+G +SEV + +D+ T++ KG + + +PE
Sbjct: 314 EESIAESGRMFIRNLTYTTTEDDVRKLFEKYGPLSEVDLPIDRMTRKPKGFGTITFLMPE 373
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A LD SI GR+LH++P + K S + + N T KQ++E + KA+ +S
Sbjct: 374 HAVKAYSELDGSILDGRMLHILPGKTKTSLENIDTENL------TYKQKKELQTKATASS 427
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL--AVRIALGETQVIAETKKAL 469
+ WN+LF+ + V I ++ +K LL+ E+N + AV++ALGETQ++ +TK L
Sbjct: 428 SHN--WNTLFLGQNAVANAIVSRYNTTKEKLLEDESNGMSAAVKLALGETQLVQDTKIFL 485
Query: 470 TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST 529
GV + + E KRS+ + LVKNLP ++ EL +MF K G L ++ILP
Sbjct: 486 EENGVCLDAFNETPK------KRSSTIILVKNLPAETKPNELQEMFAKHGELARIILPPA 539
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH 589
ALV FLEP EA AF+ LAY +YK +PLYLEWAP + + ++ +N+
Sbjct: 540 GITALVEFLEPFEARKAFRTLAYTKYKHLPLYLEWAPDNSFTTPASKNNTIENNVTT--- 596
Query: 590 DAKRALLEQQLEGVTDADIDPDRVESR------------SLFVKNLNFKTCDENLRKHFG 637
K A L++ + VT + + ++ + +LFVKN+NF T +E L+ +FG
Sbjct: 597 -KKSADLKEVKDEVTIKEFNENKNNTHKEEDNEPPESDTTLFVKNINFSTTEEQLKDYFG 655
Query: 638 EHIKEGRI--LSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALIL 694
K G + +++ K +N K +SMG+GFI + A + LQ ++LDG +L L
Sbjct: 656 ---KCGPLHYITIATKMDPENPAKKLSMGYGFIRYKRKFDADRALKTLQMSVLDGKSLEL 712
Query: 695 QLCHAK--KDEQVVKKAEK--DKSSTKLLVRNVAFEA 727
+ D + +K K +++ TK+LVRN+ F+A
Sbjct: 713 KRSERTLISDVKTARKKSKITEQTGTKILVRNIPFQA 749
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 96/164 (58%), Gaps = 6/164 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLPK VT+ +L++ FSQKG +TD +L TKDGK R+FAFIG+++E++A+ A Y
Sbjct: 2 SRLIVKNLPKSVTDIKLKELFSQKGIVTDVQLKYTKDGKFRRFAFIGYKSEEQAKLAQSY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGE--KKTI 118
F+++++DT +I E + P + + + + + + +K K + KK +
Sbjct: 62 FDQTFIDTSKIYVEQCANLESKVKPIDLTENTEEVKNKSDKKKKKKKADKKENDELKKAL 121
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVS 162
EK DDP +EFL+ + +W ND IG+ D+ K S
Sbjct: 122 EK--HKDDPLFMEFLETHTGKDAKTVWKND--IGVPKDEIEKSS 161
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL V+NLP + T+ +L+E FS+ G V++V + KD K + A++ Y E A A
Sbjct: 3 RLIVKNLPKSVTDIKLKELFSQKGIVTDVQLKYTKDGKFRR-FAFIGYKSEEQAKLAQSY 61
Query: 360 LDNSIFQGRLLHV 372
D + ++V
Sbjct: 62 FDQTFIDTSKIYV 74
>gi|60416093|gb|AAH90711.1| Rbm19 protein, partial [Danio rerio]
Length = 802
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 167/412 (40%), Positives = 239/412 (58%), Gaps = 36/412 (8%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
V ESGRLF+RN+PYT TE++L+E FSK G +SEV +D TK+ KG A+V Y IPE+A
Sbjct: 395 VAESGRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAV 454
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT 414
A+ LD FQGR+LHVM +R KK Q + G+ + K+ +++ K ASG++
Sbjct: 455 SALAQLDGHTFQGRVLHVMASRLKKEKADQ---GPDAPGSSSYKR--KKDAKDKAASGSS 509
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN-DLAVRIALGETQVIAETKKALTNAG 473
WN+LF+ V + IA K+ +KS +LD E++ LAVR+ALGETQ++ ET++ L + G
Sbjct: 510 HNWNTLFLGTSAVADAIAEKYNTTKSQVLDHESDGSLAVRMALGETQIVQETRQFLLDNG 569
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
V++ S + S +RS V LVKNLP +L +F GSL +V+LP + A
Sbjct: 570 VSLDSFSQASG------ERSKCVILVKNLPSGVQVADLEALFSPHGSLGRVLLPPSGLTA 623
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTS--------KGNQKNDAV 585
+V FLEP EA AF LAY +++ VPLYLEWAP V + S K KND+V
Sbjct: 624 IVEFLEPTEAKRAFMKLAYTKFQHVPLYLEWAPVAVFTTPSAPRPEPQTKEKSAVKNDSV 683
Query: 586 VGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRI 645
E + + + Q+ + +LF+KNLNF T +E L+K F K G +
Sbjct: 684 QNEEEEEEEEEDDQI------------LPGSTLFIKNLNFITSEETLQKTFS---KCGVV 728
Query: 646 LSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL 696
S + KK K GK +SMG+GF+++ + E A R LQ +D H L +++
Sbjct: 729 KSCTISKKRDKAGKLLSMGYGFVQYKTPEAAQKAMRQLQHCTVDEHQLEVKI 780
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 97/154 (62%), Gaps = 4/154 (2%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + EDR R F+ G +TD L TKDGK R+F F+GF+TE++A++A+K+
Sbjct: 2 SRLIVKNLPNGMKEDRFRKMFADFGTLTDCALKFTKDGKFRKFGFVGFKTEEDAQKALKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKK--EKEVSEDEKNPVLAAKRGEKKTI 118
FNKS++DT R++ E+ + GDPN RPWS+++ + +K+ E + + ++ + K I
Sbjct: 62 FNKSFVDTSRVTVELCTEFGDPNKARPWSKHTRQPSSKKDTEEKKTHEQGEKEKKKPKKI 121
Query: 119 EKVTEN--DDPQLLEFLQVMQPRVKSKMWANDTL 150
V + D EFL V Q R + WANDT+
Sbjct: 122 LNVLGDLEKDESFQEFLAVHQKRGQVPTWANDTV 155
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTK---RSKGIAYVLYAIP 350
++L LF++NL + +E+ L++ FSK G V I +D S G +V Y P
Sbjct: 697 QILPGSTLFIKNLNFITSEETLQKTFSKCGVVKSCTISKKRDKAGKLLSMGYGFVQYKTP 756
Query: 351 ESASRAIEVLDN 362
E+A +A+ L +
Sbjct: 757 EAAQKAMRQLQH 768
>gi|302307467|ref|NP_984131.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|442570228|sp|Q75A83.2|MRD1_ASHGO RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|299789015|gb|AAS51955.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|374107347|gb|AEY96255.1| FADR035Cp [Ashbya gossypii FDAG1]
Length = 838
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 258/444 (58%), Gaps = 28/444 (6%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+GRLF+RN+ Y ATE++ ++ FS +G + EVH+ VD T +SKG AYVL+ PE A+ A
Sbjct: 300 TGRLFLRNILYDATEEDFKQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANAY 359
Query: 358 EVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
LD IFQGRLLH++PA KK+ D+ +L N LK++RE +RKA+ A+ T
Sbjct: 360 IELDKQIFQGRLLHILPADAKKTHRLDEFDLKNL------PLKKQRELKRKAT-AAQQTF 412
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVN 475
+WNSLFM D V+ ++A K G+ KS L+D E + AV+ AL E VI + +K GV+
Sbjct: 413 SWNSLFMNQDAVLSSVAAKLGMEKSQLIDPENSGSAVKQALAEAHVIGDVRKYFEARGVD 472
Query: 476 VSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALV 535
++ E+F +R + + LVKN P+ ++ ELA++F FG ++++++P + T+A++
Sbjct: 473 LTQFEKFKKVT----ERDDRIILVKNFPHGTTREELAELFLPFGKIERLLMPPSGTIAII 528
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRAL 595
+ + A AF L+YKR+K LYLE P D S+ +G++ + D K
Sbjct: 529 QYRDVPAARGAFTKLSYKRFKEAILYLEKGPKDCFSRE--PRGDELLEGDAAPEDVKE-- 584
Query: 596 LEQQLEGVTDADIDPDRVESR-------SLFVKNLNFKTCDENLRKHFGEHIKEGRILS- 647
+++ +E V DAD E+ S+FVKNLNF T L + F G +++
Sbjct: 585 IKKSVEDVMDADSKTPSSEATAIDGPTVSIFVKNLNFSTTSAQLAEKFKPF--SGFVVAQ 642
Query: 648 VKVKKHLKNG-KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV 706
VK K KN K +SMGFGFIEF + E A V + G ++DGH + L++ H +
Sbjct: 643 VKTKPDPKNSDKKLSMGFGFIEFRTKEQAGAVIAAMDGAVIDGHKIQLKISHKQSSLPKT 702
Query: 707 KKAEKDKSSTKLLVRNVAFEAQRK 730
K K K S K++V+N+ FEA RK
Sbjct: 703 SKGSKKKISGKIIVKNLPFEATRK 726
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 303 VRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDN 362
V+NLP+ AT ++ E FS FG + V V K K ++G A+V + +P A A++ L
Sbjct: 716 VKNLPFEATRKDVFELFSSFGQLKSVR-VPKKFDKSARGFAFVEFLLPSEAENAMDQLQG 774
Query: 363 SIFQGRLLHVMPARHKKSSDKQE 385
GR L VM ++S D +E
Sbjct: 775 VHLLGRRL-VMQYAEQESDDVEE 796
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Query: 499 VKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYK 553
VKNLP++++ ++ ++F FG L V +P S + A V FL P EA A L
Sbjct: 716 VKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPSEAENAMDQLQGV 775
Query: 554 RYKGVPLYLEWAPS---DVLSQSSTSKGNQKNDAVVGEHDAKR 593
G L +++A DV Q S K A V + A R
Sbjct: 776 HLLGRRLVMQYAEQESDDVEEQISKMTMKMKKQAAVSKMGALR 818
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 620 VKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVC 679
VKNL F+ +++ + F G++ SV+V K + GF F+EF A N
Sbjct: 716 VKNLPFEATRKDVFELFSSF---GQLKSVRVPKKFDKS---ARGFAFVEFLLPSEAENAM 769
Query: 680 RDLQGTILDGHALILQLCHAKKD---EQVVKKAEKDK 713
LQG L G L++Q + D EQ+ K K K
Sbjct: 770 DQLQGVHLLGRRLVMQYAEQESDDVEEQISKMTMKMK 806
Score = 39.3 bits (90), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 5 VKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKS 64
VKNLP T + + FS G++ ++ + D +R FAF+ F EAE A+
Sbjct: 716 VKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPSEAENAMDQLQGV 775
Query: 65 YLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVS 100
+L R+ + A + D ++ S+ ++K +K+ +
Sbjct: 776 HLLGRRLVMQYAEQESD-DVEEQISKMTMKMKKQAA 810
>gi|395513917|ref|XP_003761168.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 19
[Sarcophilus harrisii]
Length = 954
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 170/472 (36%), Positives = 264/472 (55%), Gaps = 59/472 (12%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
++ +SGRLFVRNLPYT+TE++L + F+K+G +SE+H +D TK+ KG A+V Y PE A
Sbjct: 386 DLADSGRLFVRNLPYTSTEEDLEKIFAKYGPLSEIHYPIDGLTKKPKGFAFVTYMFPEHA 445
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
+A +D +FQGR+LHV+P+ KK + +S ++ K++ +++ +S +S N
Sbjct: 446 VKAFAEVDGQVFQGRMLHVLPSTIKKEPSE----SSDAEPASYKKKKALKDKASSSSSHN 501
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALTNA 472
WN+LFM + V + +A K+ +KS + D E +AVR+ALGET+++ E ++ L
Sbjct: 502 ---WNTLFMGTNAVADAVAHKYNATKSQVFDHEIRGSVAVRVALGETELVQEVRRFLIEH 558
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL 532
GV++ S + +A +RS V LVKNLP + EL +F + GSL +V+LP
Sbjct: 559 GVSLDSFSQAAA------ERSKSVILVKNLPAGTQASELRDIFSRHGSLGRVLLPEGGVT 612
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
A+V +LEP+EA AF LAY ++ PLYLEWAP V S + K Q D G+ A
Sbjct: 613 AIVEYLEPLEARRAFTSLAYSKFHDAPLYLEWAPMGVFSSPAPLKKEQ--DQSGGQEAA- 669
Query: 593 RALLEQQLEGVTDADID-PD---------------------------RVESRSLFVKNLN 624
+ + E VT + PD + +LF+KNLN
Sbjct: 670 ----QVEAESVTCPEAQRPDGEAAENTPATPEEPNAPAEEEEEEEEESLPGCTLFIKNLN 725
Query: 625 FKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQ 683
F T +E L++ F K G + S V KK K G +SMGFGF+E+ E A + LQ
Sbjct: 726 FSTTEEMLKEVFS---KVGTVKSCTVSKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQ 782
Query: 684 GTILDGHALILQLCHAKKDEQVVKKAEKDKS-----STKLLVRNVAFEAQRK 730
G+++DGH L +++ + + VV A + ++ ++K+LVRN+ F+A ++
Sbjct: 783 GSVVDGHKLEVKISE-RAIKPVVTSARQRQTAHKQKTSKILVRNIPFQANKQ 833
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 153/344 (44%), Gaps = 69/344 (20%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPSGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQNALDH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--------KEKEVSEDEKNPVLAAKR 112
F++S++DT R++ E + GDP+ PR WS++S K K VSE +K+
Sbjct: 62 FHRSFIDTSRVTVEFCKSFGDPSKPRAWSKHSQKATQPRTPEKSPAVSETQKDKKKKKVT 121
Query: 113 GEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGG 172
GE + ++K D + EFL V Q R + WANDT+ + +K KV +
Sbjct: 122 GELEKLKK-----DAEFQEFLMVHQKRNQVATWANDTV--EVEPRKGKVKRDDDY----- 169
Query: 173 EKSITLHVKSDKSNVITDSQATEKSKNAAADEL-------MSDMDYFKSRVKKDWSDSES 225
L+ SD + E S+ A+ + +SDMDY KS+V + S E
Sbjct: 170 -----LNFDSDSGQESEEDGEDEDSETEASSGVKAAEQKELSDMDYLKSKVVRADSSEEE 224
Query: 226 EDD------------SAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEED 273
E + + G D G EEE G
Sbjct: 225 ESEDEEACEEEEEPLTPGSGRPQDGGSGPEEEHTKARGKK-----------------PPA 267
Query: 274 ANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELRE 317
+ GE+ P Q E + + +R P+ TE +RE
Sbjct: 268 SKGEVTKPA--------AQSEPTTAYTVKLRGAPFNVTEQNVRE 303
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 134/346 (38%), Gaps = 76/346 (21%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP ELR+ FS+ G++ V + T A V Y P A RA L
Sbjct: 577 ILVKNLPAGTQASELRDIFSRHGSLGRVLLPEGGVT------AIVEYLEPLEARRAFTSL 630
Query: 361 DNSIFQGRLLHV---------MPARHKKSSDK---QELHNSTSQGTKTLKQRREEERKAS 408
S F L++ PA KK D+ QE ++ E +R
Sbjct: 631 AYSKFHDAPLYLEWAPMGVFSSPAPLKKEQDQSGGQEAAQVEAESVTC----PEAQRPDG 686
Query: 409 EASGNTKAWN---------------------SLFMR------PDTVVENIARKHGVSKSD 441
EA+ NT A +LF++ + +++ + K G KS
Sbjct: 687 EAAENTPATPEEPNAPAEEEEEEEEESLPGCTLFIKNLNFSTTEEMLKEVFSKVGTVKSC 746
Query: 442 LLDREANDLAVRIALG----ETQVIAETKKAL---TNAGVNVSSLE------------EF 482
+ ++ N V +++G E + + +KAL + V+ LE
Sbjct: 747 TVSKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGSVVDGHKLEVKISERAIKPVVTS 806
Query: 483 SAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALV 535
+ + K+ LV+N+P+ +++ E+ ++F FG L V LP T V
Sbjct: 807 ARQRQTAHKQKTSKILVRNIPFQANKQEIRELFSTFGELKTVRLPKKMTGTGPHRGFGFV 866
Query: 536 VFLEPVEAAAAFKGLAYKRY-KGVPLYLEWAPSDVLSQSSTSKGNQ 580
FL +A AF L + + G L LEWA ++ Q+ K Q
Sbjct: 867 DFLTKQDAKRAFNALCHSTHLYGRRLVLEWADTEETVQALRRKTAQ 912
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P + +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 819 SKILVRNIPFQANKQEIRELFSTFGELKTVRLPKKMTGTGPHRGFGFVDFLTKQDAKRAF 878
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 879 NALCHSTHLYGRRLVLEWA 897
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASR 355
++ ++ VRN+P+ A + E+RE FS FG + V + T +G +V + + A R
Sbjct: 817 KTSKILVRNIPFQANKQEIRELFSTFGELKTVRLPKKMTGTGPHRGFGFVDFLTKQDAKR 876
Query: 356 AIEVLDNSI-FQGRLL 370
A L +S GR L
Sbjct: 877 AFNALCHSTHLYGRRL 892
>gi|348551182|ref|XP_003461409.1| PREDICTED: probable RNA-binding protein 19-like [Cavia porcellus]
Length = 961
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 163/466 (34%), Positives = 259/466 (55%), Gaps = 46/466 (9%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLFVRNLPYT+TE++L + FS +G +SE+H +D TK+ KG A+V + PE
Sbjct: 395 EEDLADSGRLFVRNLPYTSTEEDLEKLFSAYGPLSELHYPIDTLTKKPKGFAFVTFLFPE 454
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A +D +FQGR+LHV+P+ KK + ++ + + G+ K++ +++ S +S
Sbjct: 455 HAVKAYAEVDGQVFQGRMLHVLPSTIKKEAGEE----AGAPGSSYKKKKDAKDKANSSSS 510
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKKALT 470
N WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E ++ L
Sbjct: 511 HN---WNTLFMGPNAVADAIAQKYSATKSQVFDHETKGSVAVRVALGETQLVQEVRRFLL 567
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
+ GV + S + +A +RS V L KNLP + EL + F +FGSL +V+LP
Sbjct: 568 DNGVCLDSFSQAAA------ERSKTVILAKNLPAGTLAAELQETFSRFGSLGRVLLPEGG 621
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHD 590
A+V FLEP+EA AF+ LAY ++ VPLYLEWAP + S ++ + + A +
Sbjct: 622 ITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGIFSSTAPQEKVPQKAATQPTGE 681
Query: 591 AKRALLEQQLE------GVTDADIDPD------------------RVESRSLFVKNLNFK 626
+ +E + P + +LF+KNLNF
Sbjct: 682 DEEEPEAADMETPETEKPAEEGTAAPTTRTEGGGEEEEEEEEEEESLPGCTLFIKNLNFD 741
Query: 627 TCDENLRKHFGEHIKEGRI-LSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGT 685
T +E L+K F K G + KK K G +SMGFGF+E+ E A R LQG
Sbjct: 742 TTEETLKKVFS---KAGALRSCSISKKKSKAGALLSMGFGFVEYKKPEHAQKALRQLQGH 798
Query: 686 ILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEA 727
++DGH + +++ + K+ + ++++K+LVRN+ F+A
Sbjct: 799 VVDGHKVEVRISERATKPAMTSSWKKQVPRKQTTSKILVRNIPFQA 844
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 95/155 (61%), Gaps = 8/155 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDG+ R+F FIGF++E EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGQFRKFGFIGFKSEAEAQRALSH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAA---KRGEK 115
F+KS++DT R++ E + GDP PR WS+++ K + K+ S+D P KRG
Sbjct: 62 FHKSFIDTARVTVEFCKSFGDPTKPRAWSKHAQKPTQTKKSSQDSTGPETKQDKKKRGPS 121
Query: 116 KTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTL 150
+EK+ E D + EFL V Q R++ WAND L
Sbjct: 122 D-LEKLKE--DAEFQEFLSVHQKRMQVATWANDML 153
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRS 339
P SS K V ++ S ++ VRN+P+ A E+RE FS FG + V + T R
Sbjct: 816 PAMTSSWKKQVPRKQTTS-KILVRNIPFQADLREIRELFSTFGELKTVRLPKKMAGTGRH 874
Query: 340 KGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
+G +V + + A RA L +S GR L
Sbjct: 875 RGFGFVDFFTKQDAKRAFNALCHSTHLYGRRL 906
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST-------KTLALVVFLEPVEA 543
K++ LV+N+P+ + E+ ++F FG L V LP + V F +A
Sbjct: 829 KQTTSKILVRNIPFQADLREIRELFSTFGELKTVRLPKKMAGTGRHRGFGFVDFFTKQDA 888
Query: 544 AAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
AF L + + G L LEWA S+V Q+
Sbjct: 889 KRAFNALCHSTHLYGRRLVLEWADSEVTLQA 919
>gi|295673056|ref|XP_002797074.1| multiple RNA-binding domain-containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226282446|gb|EEH38012.1| multiple RNA-binding domain-containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 806
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 224/765 (29%), Positives = 357/765 (46%), Gaps = 107/765 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D LR FS + ++TDA ++ K R IGF E
Sbjct: 5 TRVFVSGLPPTFSNDDLRKHFSIRYQVTDAHVI----PKRR----IGFDVE--------- 47
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
N S + R+ R D P +S K+ A K+ ++
Sbjct: 48 -NSSGDGSARVDETDRRLKIDAEPPTVGKSHS-----------KHGTSANSTSLKRKHDQ 95
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLIG-----------LMADQKAKVSENISQAI 169
V + DP+L E++ MQP +KSK WA+D+++ ++ A+ SE ++ +
Sbjct: 96 VEQKQDPKLQEYIAAMQPPMKSKTWADDSIMADTNAVPANNATIIPSINAEKSEAQNKRL 155
Query: 170 KGGEKSITLHVKSDKSNVIT-DSQATEKSKN----------AAADELMSDMDYFKSRVKK 218
K + + ++ N I DS T + ++ + + SDMD+ +SR +
Sbjct: 156 KFDHHFLVKKKQMERPNHIPEDSFTTPRPRSVESENDPQVESVVEAPKSDMDWLRSRTSR 215
Query: 219 DWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEI 278
E EDD G E E +++DH C E
Sbjct: 216 LLGLVEEEDDDEGSAVTPRVREIEASDDSDHEIVMGRNC-------------PESTLPRH 262
Query: 279 VDPGNPSSSSKDVQQEV---LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKD 335
+P NPS + + E+GRLFVRNLPY A+E +L F +H+ D
Sbjct: 263 NEPPNPSDDKESFDANIGLLRETGRLFVRNLPYNASESDLEPLF--------IHVAFDTR 314
Query: 336 TKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQG 393
+SKG AY+ Y PE+A +A VLD F+GRLLH++PA KK+ D+ EL
Sbjct: 315 QSKSKGFAYIQYVDPEAAIQAYRVLDGKDFEGRLLHILPASPKKTHKLDEYEL------- 367
Query: 394 TKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVR 453
+K +++++ ++ EAS ++ WNSL+M D V+ +++ + GVSKS+LLD ++D AV+
Sbjct: 368 SKLPLKKQQQIKRKQEASSSSFNWNSLYMNADAVMSSVSERLGVSKSELLDPTSSDAAVK 427
Query: 454 IALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAK 513
A ET VI ETK ++ GVN+ S + G T LVKN + +L K
Sbjct: 428 QAHAETHVIQETKAYFSSNGVNLDSFRQREQGNT--------AILVKNFSFCVKAEDLRK 479
Query: 514 MFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQS 573
+F FG + ++++P + T+A+V F E AFKGLAY++ L+LE AP D+ +
Sbjct: 480 LFESFGEIKRLLMPPSGTIAIVEFALADECQKAFKGLAYRKLGDSILFLERAPKDLFDE- 538
Query: 574 STSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLR 633
K N + + ++AD + +E+ +LFV+NLNF T + L
Sbjct: 539 ---KAIAVNAVLSAPKVVSQTFSTSDTFKASEADENETLLETSTLFVRNLNFSTTNVRLA 595
Query: 634 KHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGH 690
+ F +G LS +VK + G+ +SMGFGF+EF + A + G LD H
Sbjct: 596 EVF--QPLDG-FLSARVKTKPNPKRPGETLSMGFGFVEFRTSAQARAALATMNGYKLDQH 652
Query: 691 ALILQLCHAKKDEQVVKKAEKDKS-----STKLLVRNVAFEAQRK 730
L+++ H D ++ E + TK+L++N+ F+A +K
Sbjct: 653 ELVIKTSHKATDAAEERRREDNAKKLAMRGTKILIKNLPFQATKK 697
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R+ F G++ ++ + D +R FAF F + +EAE A++
Sbjct: 683 TKILIKNLPFQATKKDIRNLFGAYGKLRSVRVPQKFDRTARGFAFADFVSAREAENAMEA 742
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ E A
Sbjct: 743 LKHTHLLGRRLVLEFA 758
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
L+KNLP+ +++ ++ +FG +G L V +P + + A F+ EA A + L +
Sbjct: 686 LIKNLPFQATKKDIRNLFGAYGKLRSVRVPQKFDRTARGFAFADFVSAREAENAMEALKH 745
Query: 553 KRYKGVPLYLEWAPSDVL 570
G L LE+A D +
Sbjct: 746 THLLGRRLVLEFASEDAI 763
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V + + GF F +F S A N
Sbjct: 685 ILIKNLPFQATKKDIRNLFGAY---GKLRSVRVPQKFDR---TARGFAFADFVSAREAEN 738
Query: 678 VCRDLQGTILDGHALILQLC 697
L+ T L G L+L+
Sbjct: 739 AMEALKHTHLLGRRLVLEFA 758
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ ++ ++NLP+ AT+ ++R F +G + V V K + ++G A+ + A
Sbjct: 679 AMRGTKILIKNLPFQATKKDIRNLFGAYGKLRSVR-VPQKFDRTARGFAFADFVSAREAE 737
Query: 355 RAIEVLDNSIFQGRLL 370
A+E L ++ GR L
Sbjct: 738 NAMEALKHTHLLGRRL 753
>gi|242013547|ref|XP_002427466.1| RNA binding motif protein, putative [Pediculus humanus corporis]
gi|212511852|gb|EEB14728.1| RNA binding motif protein, putative [Pediculus humanus corporis]
Length = 846
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 175/452 (38%), Positives = 251/452 (55%), Gaps = 36/452 (7%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
V ESGR+F+RNLPYT TE+EL+E F K+G V E + +D T++ KG V Y IPE A
Sbjct: 330 VAESGRIFIRNLPYTVTENELKEVFEKYGPVIEFILPIDSFTRKPKGFGIVTYLIPEHAC 389
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT 414
+A LD +IF GR+LH++PA +++L+ + + K K++ + +T
Sbjct: 390 KAYNELDGTIFSGRMLHLLPALPNNEFSEEDLNEDSFKKKKMKKEQSK--------INST 441
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGV 474
WN+ F+ + + E +A + SK +LD + + AVR+ALGETQ + + K+ L V
Sbjct: 442 ANWNTFFIGENALAEVVAATYKTSKESVLDDKKSGAAVRLALGETQFVNKMKEFLEENNV 501
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLAL 534
+ S E S RSN V LVKNLP+ ++ E+++ F KFG L +V++P + AL
Sbjct: 502 CLDSFENMSVS-----PRSNTVILVKNLPFGTTSEEISEKFRKFGLLSRVVVPPSGVAAL 556
Query: 535 VVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH--DAK 592
V F EP EA AF+ L+Y ++K VPLYLEWAP V S+ +K +K + E+ K
Sbjct: 557 VEFAEPSEARIAFRRLSYSKFKHVPLYLEWAPEKVF--STEAKPVEKIEKTCNENLESEK 614
Query: 593 RALLEQQLEGVTD---ADIDPDRV--ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS 647
Q E T I+ RV E +FVKNLNF T + +LRKHF G +LS
Sbjct: 615 STNQNQSAENETQKTTGTIEEQRVPEEGTVIFVKNLNFATNESSLRKHFEAC---GTVLS 671
Query: 648 VKV--KKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHA----- 699
V + KK K GK++SMG+GF+EF E A + LQ T LD H + L+ +
Sbjct: 672 VTIARKKDPKEPGKSLSMGYGFVEFSLKEEADKALKTLQFTNLDDHKIELKRSNRTTSVA 731
Query: 700 -KKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
KK E K S+K+LVRNV F+A ++
Sbjct: 732 NTNSRNTYKKCE--KPSSKILVRNVPFQATKR 761
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 118/226 (52%), Gaps = 39/226 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP +T+++L FS++G +TD +L TK+GK R+FAFIGF+ + AE+A
Sbjct: 2 SRLIVKNLPGLITKEKLHQIFSEQGVVTDVQLKYTKEGKFRKFAFIGFQKPEYAEKAKAA 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSL-------KKEKEVSEDEKNPVLAAKRG 113
NK++++ +I E ++GDPN PRPWS+Y+ KK+ +++ +E L
Sbjct: 62 LNKTFINMSKIQVETCAELGDPNKPRPWSKYAPENVAKKKKKQTQINHNESKKKLKMNEK 121
Query: 114 EK------KTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQ 167
EK K + K ENDD EF+++ P + + +D+K EN+ +
Sbjct: 122 EKIKDKEVKELLKNHENDD-LFSEFMKIHVPD-----------LSINSDKKL---ENVEE 166
Query: 168 AIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFK 213
IK K N DS+ ++ N A++ + D +Y K
Sbjct: 167 EIKNTNK-----------NENEDSENNKEETNVLANQDIPDSEYIK 201
>gi|260834035|ref|XP_002612017.1| hypothetical protein BRAFLDRAFT_124790 [Branchiostoma floridae]
gi|229297390|gb|EEN68026.1| hypothetical protein BRAFLDRAFT_124790 [Branchiostoma floridae]
Length = 843
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 167/491 (34%), Positives = 268/491 (54%), Gaps = 58/491 (11%)
Query: 290 DVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAI 349
D + + ESGRLF+RNLPY E++L F+K+G ++E HI +D T+R+ GIA+V + +
Sbjct: 256 DEDESIAESGRLFIRNLPYLCKEEDLEGLFTKYGPLTECHIPIDTFTRRAMGIAFVTFML 315
Query: 350 PESASRAIEVLDNSIFQGRLLHVMPAR------------------HKKSSDKQELHNSTS 391
PE A A LD ++F GRLLH++P R K++ K + +
Sbjct: 316 PEHAVTAFSQLDGTVFMGRLLHILPGRGRNQEEGARGGKEGDFKKKKEADQKAKAGRGRN 375
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND-L 450
Q + + E+E +G++ WNSLF+ + V + +A K+G +KS +LD ++ + L
Sbjct: 376 QEEQAGGGKEEKEADQKAKAGSSHNWNSLFLGENAVADVMAEKYGTTKSHVLDADSRESL 435
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVF------------- 497
AVR+ALGETQ++AET++ L + GV + + + +A + + VF
Sbjct: 436 AVRMALGETQIVAETRQFLLDNGVKLDAFSQPAAARRTEATQLQEVFSKFGQLGRVVLPP 495
Query: 498 -LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKR-- 554
+ NLP + +L ++F KFG L +V+LP A+V FLEP EA +AF LAY +
Sbjct: 496 AVFINLPAGTEATQLQEVFSKFGQLGRVVLPPAGVTAVVEFLEPSEARSAFYKLAYTKEY 555
Query: 555 ---------YKGVPLYLEWAPSDVLSQSSTSKGN-QKNDAVVGEHDAKRALLEQQLEGVT 604
++ VPLYLEWAP++V S + G Q+ D+ E + + +G
Sbjct: 556 DYNICSDSQFQHVPLYLEWAPTEVFSTPRDTDGQKQQQDSGEHESAEEEESDSDEDQGQE 615
Query: 605 DADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMG 663
+ +LF+KNLNF T + L++ F R +++ KK +KN GK +SMG
Sbjct: 616 ERG-------KCTLFLKNLNFDTTEATLKQRFSS-CGAIRNVTIATKKDMKNPGKLLSMG 667
Query: 664 FGFIEFDSVETATNVCRDLQGTILDGHALILQLCH--AKKDE--QVVKKAEKDKSSTKLL 719
+GF+EF E+A +DLQ +DGH+L L++ + +KD+ Q K + K + S+K+L
Sbjct: 668 YGFVEFQKRESAQKALKDLQHCEVDGHSLELKVSNRAVQKDDSSQRKKVSRKKQRSSKIL 727
Query: 720 VRNVAFEAQRK 730
VRN+ F+A ++
Sbjct: 728 VRNIPFQANKR 738
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP +TE + + F G +TD KL +K+G+ R F F+GFR+ QEAE+A++
Sbjct: 2 SRLIVKNLPPSITEHKFQSMFEAVGTVTDCKLKYSKNGQFRHFGFVGFRSHQEAEKAVQQ 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPW 88
F+ S+L+T RI E + + + P PW
Sbjct: 62 FHNSFLNTVRIQVEFCKDLSGKDTPTPW 89
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 285 SSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAY 344
SS K V ++ S ++ VRN+P+ A + E++ FS FG + V + + +G +
Sbjct: 710 SSQRKKVSRKKQRSSKILVRNIPFQANKREVQNLFSTFGEIKFVRLPQKFGGTQHRGFGF 769
Query: 345 VLYAIPESASRAIEVLDNSI-FQGRLL 370
V + + A RA L +S GR L
Sbjct: 770 VEFLSKQDAKRAFNALVHSTHLYGRRL 796
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST------KTLALVVFLEPVEAA 544
+RS+ + LV+N+P+ +++ E+ +F FG + V LP + V FL +A
Sbjct: 721 QRSSKI-LVRNIPFQANKREVQNLFSTFGEIKFVRLPQKFGGTQHRGFGFVEFLSKQDAK 779
Query: 545 AAFKGLAYKRY-KGVPLYLEWA 565
AF L + + G L LEWA
Sbjct: 780 RAFNALVHSTHLYGRRLVLEWA 801
>gi|260948938|ref|XP_002618766.1| hypothetical protein CLUG_02225 [Clavispora lusitaniae ATCC 42720]
gi|238848638|gb|EEQ38102.1| hypothetical protein CLUG_02225 [Clavispora lusitaniae ATCC 42720]
Length = 633
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 251/457 (54%), Gaps = 37/457 (8%)
Query: 286 SSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYV 345
S K ++L++GRLFVRN+ Y + ED+ RE FS++G + EVHI VD T +SKG YV
Sbjct: 90 SPEKLTADKILQTGRLFVRNILYDSKEDDFRELFSQYGPLKEVHIAVDTRTGKSKGYVYV 149
Query: 346 LYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEER 405
+ E A A LD IFQGRLLH++ KK E + LK++RE ++
Sbjct: 150 QFNNNEDAVSAFTALDKQIFQGRLLHILAGEAKKDHKLDEF----ALKNLPLKKQRELKK 205
Query: 406 KASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAET 465
KAS AS + WNSLFM D V+E++A K G++KS L+D E ++ AV+ AL E VI +
Sbjct: 206 KAS-ASKSQFNWNSLFMNSDAVLESVAAKMGIAKSQLIDPENSNSAVKQALAEAHVIGDV 264
Query: 466 KKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVI 525
+K GV++++ + +R + + LVKN PY +S+ E+ +F ++G L +V+
Sbjct: 265 RKFFEERGVDLTTFSQ--------KERDDKIILVKNFPYGTSQEEIRDLFAEYGPLKRVL 316
Query: 526 LPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAV 585
+P T+A+V F + A +AF LAY+ +K LYLE P D+ + TS D
Sbjct: 317 MPPAGTIAIVEFRDSPSARSAFTKLAYRMFKKAILYLEKGPKDLFVREPTS------DET 370
Query: 586 VGEHDAKRALLEQQLEGVTDADIDPDRVESR-----------SLFVKNLNFKTCDENLRK 634
V + + +E +L T D+ D ES S+FVKNLNF T +LR+
Sbjct: 371 VSQSEKTEKPVEAKL---TARDVMEDANESEEEQMAEVGPTVSVFVKNLNFSTTSASLRE 427
Query: 635 HFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALI 693
F E + + +VK K K G +SMGFGF+EF + E A L G +L+GH +
Sbjct: 428 LFSE-LPGFVVATVKTKPDPKKEGGVLSMGFGFVEFKTKEQAEAAISALDGHVLEGHRIQ 486
Query: 694 LQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
L++ H K + + K S K++++N+ FEA RK
Sbjct: 487 LKISHRKSGSK--PQGAKSSKSNKIIIKNLPFEATRK 521
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++ ++NLP+ AT ++ E F +G+V V V K K ++G A+V Y + + A A+
Sbjct: 506 SNKIIIKNLPFEATRKDVLELFGAYGSVKSVR-VPKKFDKSARGFAFVEYTMLKEAENAM 564
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
L+ GR L VM K+S + ++ +Q K KQ E A +SG K
Sbjct: 565 NQLEGVHLLGRRL-VMQYAEKESDNAEDEIEKMTQKVK--KQAASREMAAVRSSGKGK 619
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 12/110 (10%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S + +KNL F+ +++ + FG + G + SV+V K + GF F+E+ ++
Sbjct: 506 SNKIIIKNLPFEATRKDVLELFGAY---GSVKSVRVPKKFDKS---ARGFAFVEYTMLKE 559
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKD------EQVVKKAEKDKSSTKL 718
A N L+G L G L++Q + D E++ +K +K +S ++
Sbjct: 560 AENAMNQLEGVHLLGRRLVMQYAEKESDNAEDEIEKMTQKVKKQAASREM 609
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T + + F G + ++ + D +R FAF+ + +EAE A+
Sbjct: 507 NKIIIKNLPFEATRKDVLELFGAYGSVKSVRVPKKFDKSARGFAFVEYTMLKEAENAMNQ 566
Query: 61 FNKSYLDTCRISCEIARKVGD 81
+L R+ + A K D
Sbjct: 567 LEGVHLLGRRLVMQYAEKESD 587
>gi|322787083|gb|EFZ13307.1| hypothetical protein SINV_16564 [Solenopsis invicta]
Length = 859
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 166/465 (35%), Positives = 266/465 (57%), Gaps = 55/465 (11%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++ + ESGR+F+RNL YT TED++++ F K+G +SEV + VD+ T++ KG V + +PE
Sbjct: 308 EESIAESGRIFIRNLTYTVTEDDIKKLFEKYGPLSEVDLPVDRITRKPKGFGTVTFLMPE 367
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A LD S+ GR+LH++P + K S + + N T KQ++E + KA+ +
Sbjct: 368 HAVKAYSELDGSVLDGRMLHILPGKTKASLEDIDTENL------TYKQKKELQTKAT--A 419
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL--AVRIALGETQVIAETKKAL 469
G++ WN+LF+ + V + IA ++ +K LL+ +N + AV++ALGETQ+ + K L
Sbjct: 420 GSSHNWNTLFLGQNAVADAIASRYNTTKEKLLEDGSNGMSAAVKLALGETQLAQDAKTFL 479
Query: 470 TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST 529
GV L+ F+ KRSN + LVKNLP ++ EL + F K G L ++++P
Sbjct: 480 EENGV---CLDAFNGAPK---KRSNTIILVKNLPAETKPNELQERFAKHGELARIVMPPA 533
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH 589
ALV FLEP EA AF+ LAY +YK +PLYLEWAP + + S++ KN A +
Sbjct: 534 GITALVEFLEPSEARKAFQALAYTKYKHLPLYLEWAPDNSFTTSASKTKATKNKATTKKS 593
Query: 590 -DAKRALLEQQLEGVTDAD--------------IDPDRVESRSLFVKNLNFKTCDENLRK 634
D+++ E+ +E + + ++PD +LFVKN+NF T +E L+
Sbjct: 594 TDSEKVKDEKTIEQSKEKEKNTRKKENNESTEPVEPD----TTLFVKNINFSTTEEQLKD 649
Query: 635 HFGEHIKEGRI--LSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHA 691
+FG K G + +++ K + +N + +SMG+GFI + A + LQ ++LDG +
Sbjct: 650 YFG---KCGPLHYVTIATKMNPENPAEKLSMGYGFIRYKRKLDADRALKTLQMSVLDGKS 706
Query: 692 LILQLCHAKKDEQV----VKKAEK-----DKSSTKLLVRNVAFEA 727
L L K+ E+ VK A K +++ TK+LVRN+ F+A
Sbjct: 707 LEL-----KRSERTLMSDVKTARKKSKITEQNGTKILVRNIPFQA 746
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 28/159 (17%)
Query: 12 VTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRI 71
VT+ +L++ FSQKG +TD +L +DGK R+FAFIG++TE++A+ A YF+++ +DTC+I
Sbjct: 1 VTDIKLKELFSQKGIVTDVQLKYKEDGKFRRFAFIGYKTEEQAKLAQSYFDQTCIDTCKI 60
Query: 72 SCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGE----------------- 114
S E +G + KEK + EKN + K
Sbjct: 61 SVEQCAHLGT---------CAKSKEKPIDSAEKNDISKTKDKIDKKKKKKKADKNENVEV 111
Query: 115 KKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGL 153
KK +EK +DP +EFL+ + +W ND I +
Sbjct: 112 KKALEK--HKEDPLFMEFLETHTSKDAKVIWKNDIDIPM 148
>gi|301103392|ref|XP_002900782.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
gi|262101537|gb|EEY59589.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
Length = 758
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 190/550 (34%), Positives = 287/550 (52%), Gaps = 50/550 (9%)
Query: 192 QATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGD-DDDDDDGEEEEEEENDHN 250
QA K+K A D++ D + D +D+E DD + D D +EE+ E
Sbjct: 139 QARSKTKFWANDDVQGPTDGKTATKGVDIADAEDSDDEYQELDTMKPDEDEEDSTEKVKK 198
Query: 251 GDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTA 310
G +E + D + S + + +A E P + RLFVRNLP+TA
Sbjct: 199 GKKSEAMSDM--DFLRSKMSKSEAGTEDDKP----------------TARLFVRNLPFTA 240
Query: 311 TEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLL 370
E++L S +G V EVH+ +D DT+R KG +VL+ A A+ L+ FQGR L
Sbjct: 241 VEEDLEALCSTYGPVEEVHMPLD-DTRRRKGYGFVLFRTTVDAQAALTTLNGMAFQGRRL 299
Query: 371 HVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVEN 430
HV+ AR K K + + + + KQR+E ER+ +A T WN+ ++R D V +
Sbjct: 300 HVIFARSKPV--KLDPEAALADPNLSYKQRKELERQI-QAQKKT-GWNASYIRGDATVGS 355
Query: 431 IARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLE-----EFSAG 485
+A + GV + +++D+E ++AVR+A+GET ++ E K GV+++++E + +
Sbjct: 356 LAERMGVKRGEIMDKEQGNMAVRLAIGETMLVKENKDFFAREGVDLNAIEGALVKKPTQQ 415
Query: 486 KTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAA 545
+ ++RS V L+KNLP+ + E ELA++F K G + + +LP +KTLA+V FLEP EA
Sbjct: 416 QAKKIERSTTVILIKNLPHTTDEEELAQLFRKHGEIGRFLLPPSKTLAVVEFLEPSEARK 475
Query: 546 AFKGLAYKRYKGVPLYLEWAPSDVL----SQSSTSKGNQKNDAVVGEHDAKRALLEQQLE 601
AF+ LAYK+Y+ VPLYLEWAP V S ++TS QK
Sbjct: 476 AFRSLAYKKYQHVPLYLEWAPVKVFDRPASSTNTSSSEQKGIKTTSAVVPDVDDDADAAV 535
Query: 602 GVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVS 661
++ VKNLNF T + L K F K R ++V +K K G +S
Sbjct: 536 ----------GDACHTICVKNLNFSTKEPALEKIFARCGKL-RKVTVARRKDPKRGM-LS 583
Query: 662 MGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKA----EKDKSSTK 717
MGFGF+E+ + + LQ T++DGHAL L+L KK K+A + + +K
Sbjct: 584 MGFGFVEYVDAKDTERALQTLQNTVVDGHALNLKLSQ-KKASTAPKRAAGEVDGEGRKSK 642
Query: 718 LLVRNVAFEA 727
++VRNVAFEA
Sbjct: 643 IIVRNVAFEA 652
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 130/230 (56%), Gaps = 25/230 (10%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDG-KSRQFAFIGFRTEQEAEEAIK 59
+R+ V+NLP YV RLR+ F+ +GE+TDA ++RTKDG KSR+F F+GF++ +AE+A K
Sbjct: 19 TRLYVQNLPAYVDSARLREHFAAQGEVTDACVIRTKDGSKSRRFGFVGFKSSTQAEQARK 78
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIE 119
+F++S+ DTC+I+ +A +M RPWS+YS A G + +
Sbjct: 79 FFHQSFFDTCKINVRVALARESDDMERPWSKYS-----------------AGSGRYQKLH 121
Query: 120 KVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITL- 178
+ + EF++ MQ R K+K WAND + G + A +I+ A ++ L
Sbjct: 122 SESGVTSGEFQEFMETMQARSKTKFWANDDVQGPTDGKTATKGVDIADAEDSDDEYQELD 181
Query: 179 HVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDD 228
+K D+ + +TEK K E MSDMD+ +S++ K S++ +EDD
Sbjct: 182 TMKPDED----EEDSTEKVKKGKKSEAMSDMDFLRSKMSK--SEAGTEDD 225
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 124/297 (41%), Gaps = 39/297 (13%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ ++NLP+T E+EL + F K G + + SK +A V + P A +A L
Sbjct: 427 ILIKNLPHTTDEEELAQLFRKHGEIGRFLL------PPSKTLAVVEFLEPSEARKAFRSL 480
Query: 361 DNSIFQGRLLHVMPARHK---KSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
+Q L++ A K + + +S +G KT + ++A+
Sbjct: 481 AYKKYQHVPLYLEWAPVKVFDRPASSTNTSSSEQKGIKTTSAVVPDVDDDADAAVGDACH 540
Query: 418 -----NSLFMRPDTVVENIARKHG----VSKSDLLDREANDLAVRIALGETQVIAETKKA 468
N F + +E I + G V+ + D + L++ E +T++A
Sbjct: 541 TICVKNLNFSTKEPALEKIFARCGKLRKVTVARRKDPKRGMLSMGFGFVEYVDAKDTERA 600
Query: 469 LTNAGVNV---------------SSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAK 513
L V S+ + +AG+ DG R + + +V+N+ ++++ E+ +
Sbjct: 601 LQTLQNTVVDGHALNLKLSQKKASTAPKRAAGEVDGEGRKSKI-IVRNVAFEATSNEIRE 659
Query: 514 MFGKFGSLDKVILPST-----KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
+FG FG L +V +P + A V FL EA AF LA G L LEWA
Sbjct: 660 LFGAFGQLKRVRMPKKFDGRHRGFAFVEFLTEQEARNAFSALASSHLYGRHLVLEWA 716
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 136/304 (44%), Gaps = 25/304 (8%)
Query: 285 SSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAY 344
+S+ KD QE + RL+V+NLP LREHF+ G V++ ++ KD +S+ +
Sbjct: 7 TSALKDEAQETVT--RLYVQNLPAYVDSARLREHFAAQGEVTDACVIRTKDGSKSRRFGF 64
Query: 345 VLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEE 404
V + A +A + S F ++V A ++S D + + S G+ ++ E
Sbjct: 65 VGFKSSTQAEQARKFFHQSFFDTCKINVRVALARESDDMERPWSKYSAGSGRYQKLHSES 124
Query: 405 RKAS----------EASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL-AVR 453
S +A TK W + ++ T + + ++ ++ D E +L ++
Sbjct: 125 GVTSGEFQEFMETMQARSKTKFWANDDVQGPTDGKTATKGVDIADAEDSDDEYQELDTMK 184
Query: 454 IALGETQVIAETKK-----ALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSE 508
E + KK A+++ S + + AG D K + +F V+NLP+ + E
Sbjct: 185 PDEDEEDSTEKVKKGKKSEAMSDMDFLRSKMSKSEAGTEDD-KPTARLF-VRNLPFTAVE 242
Query: 509 GELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLE 563
+L + +G +++V +P K V+F V+A AA L ++G L++
Sbjct: 243 EDLEALCSTYGPVEEVHMPLDDTRRRKGYGFVLFRTTVDAQAALTTLNGMAFQGRRLHVI 302
Query: 564 WAPS 567
+A S
Sbjct: 303 FARS 306
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S+I V+N+ T + +R+ F G++ ++ + DG+ R FAF+ F TEQEA A
Sbjct: 641 SKIIVRNVAFEATSNEIRELFGAFGQLKRVRMPKKFDGRHRGFAFVEFLTEQEARNAFSA 700
Query: 61 FNKSYL 66
S+L
Sbjct: 701 LASSHL 706
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 285 SSSSKDVQQEVLESGR---LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
S++ K EV GR + VRN+ + AT +E+RE F FG + V + D R +G
Sbjct: 624 STAPKRAAGEVDGEGRKSKIIVRNVAFEATSNEIRELFGAFGQLKRVRMPKKFDG-RHRG 682
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLL 370
A+V + + A A L +S GR L
Sbjct: 683 FAFVEFLTEQEARNAFSALASSHLYGRHL 711
>gi|195042706|ref|XP_001991484.1| GH12037 [Drosophila grimshawi]
gi|193901242|gb|EDW00109.1| GH12037 [Drosophila grimshawi]
Length = 918
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/472 (34%), Positives = 256/472 (54%), Gaps = 55/472 (11%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++ + ESGR+F RNL YT TE+EL++ F +FG V EV++ VDK T++ KG V + IPE
Sbjct: 353 EENISESGRIFFRNLAYTTTEEELQKLFERFGPVVEVNLPVDKVTRQIKGFGTVTFMIPE 412
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNST----SQGTKTLKQRREEERKA 407
+A +A LD + F GRLLH++P + EL N+ Q L ++++ K
Sbjct: 413 NALKAFNDLDGTDFHGRLLHLLPGK--------ELDNAAEEDDPQADANLSFKQKKALKL 464
Query: 408 SEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE--ANDLAVRIALGETQVIAET 465
+ + WN+LF+ + V + +A++ SK +LD + AVR+ALGETQ++ E
Sbjct: 465 KQNAQKPIGWNTLFLGANAVADLLAKQFKTSKERILDTTDGGSSAAVRLALGETQIVIEM 524
Query: 466 KKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVI 525
K+ L GV +S+ +E KRS V L KNLP D++ +L+ +F KFG + +++
Sbjct: 525 KRFLEEQGVRLSAFDE------PNQKRSRTVLLAKNLPADTAVADLSPIFSKFGPIGRLV 578
Query: 526 LPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAV 585
LP + AL+ + +P EA AFK LAY ++K VPLYLEWAP +Q T G
Sbjct: 579 LPPSGVTALIEYCDPSEARQAFKKLAYSKFKNVPLYLEWAPEHTFNQ--TLSGEPIIPKT 636
Query: 586 VGEHDAKRALLEQQLEGVTDADIDPDRVESR----------------SLFVKNLNFKTCD 629
EH AL+ QQ E + P+ ++ ++F++NLNFKT
Sbjct: 637 EPEHKPDEALVVQQPEKEAKPESKPEAKDAEDKPEAEDAEDEPEPNTTIFLRNLNFKTVM 696
Query: 630 ENLRKHFGEHIKEGRILSVKVKKHLKNGKNV-SMGFGFIEFDSVETATNVCRDLQGTILD 688
E +R HF H+ + + +K +N + + S+G+GFI+F A+ +D+Q T LD
Sbjct: 697 ETVRAHFA-HLGTVHTVEIAKRKDPQNPRQLNSLGYGFIQFKKAAVASQALKDMQLTQLD 755
Query: 689 GHALILQLCHAKKDEQVVKK----------AEKDKSSTKLLVRNVAFEAQRK 730
G+ L K+ ++V+K +K ++ TK+LVRN+ F+AQ +
Sbjct: 756 GN-----LVELKRSDRVLKTQDDGARRRQVGQKKQTGTKILVRNIPFQAQYR 802
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 114/221 (51%), Gaps = 9/221 (4%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LPK ++ED+LR+ F KG ITD +L T DGK RQF F+G+ +E EA+ AI +
Sbjct: 2 SRIIVKQLPKNISEDKLRNIFGSKGTITDLQLKYTPDGKFRQFCFVGYSSEAEAQAAIAH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS--LKKEKEVSEDEKNPVLAAKRGEKKTI 118
FN + + T R+ E +G P+ WS+Y+ KK E +DE+ + + + +K
Sbjct: 62 FNNTCIQTSRVRVESCATLGSEEKPQSWSKYAKDSKKNLEQLKDEQPQLESKSKEKKPKS 121
Query: 119 EKVTE-----NDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
KV E DDP EFLQ + +S +WAND I ++A E +
Sbjct: 122 NKVDEILGKHKDDPAFQEFLQAHD-KTRS-LWANDAGISEQTKEQASDDETTETQQAADD 179
Query: 174 KSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKS 214
++ + D+ ++ A++ +SDM+Y KS
Sbjct: 180 VDDEEADEAAALSKDKDNDDDDEDDEKLAEQPISDMEYMKS 220
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
Query: 289 KDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHI----VVDKDTKRSKGIAY 344
+ V Q+ ++ VRN+P+ A E+RE F FG ++ + I +D R G +
Sbjct: 778 RQVGQKKQTGTKILVRNIPFQAQYREVREIFKAFGELTSLRIPKKMTPGEDAHR--GFGF 835
Query: 345 VLYAIPESASRAIEVLDNSI-FQGRLLHVMPARHKKSSDKQELHNSTS 391
V Y A RA + L S GR L + A + D EL T+
Sbjct: 836 VDYTTKADAKRAFDALSASTHLYGRRLVLEWASVEDQHDVDELRKRTA 883
>gi|290993156|ref|XP_002679199.1| RNA binding domain-containing protein [Naegleria gruberi]
gi|284092815|gb|EFC46455.1| RNA binding domain-containing protein [Naegleria gruberi]
Length = 763
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 172/459 (37%), Positives = 270/459 (58%), Gaps = 47/459 (10%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
++GRLFV NL +T TEDEL+E F FG +SE+HI +D +TK S+G+A+V + IPE+A +A
Sbjct: 225 DTGRLFVYNLHFTTTEDELKELFEPFGEISELHIPIDNETKISRGVAFVHFLIPENADKA 284
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA 416
+ L NSIFQGR++H+ A+ K + + ++ + + K +RE+ +K E +G++
Sbjct: 285 KKALHNSIFQGRMIHIAKAKEKPNFNVEKENMFLGKS----KFKREQLKKLREQAGSSHN 340
Query: 417 WNSLFMRPDTVVENIARKHGVSKSDLLDREA------NDLAVRIALGETQVIAETKKALT 470
WN+ M +TV+E+++R+ GVSKS+LL ++ AVR+AL ET++I +TK+ L
Sbjct: 341 WNATHMATNTVMESMSRQLGVSKSELLMNNKDFSNVDDNAAVRMALAETELIKQTKEELQ 400
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSS----EGELAKMFG-KFGSLDKVI 525
+ G+N+ L + + +K+S LVKN+P++ + + EL +F K + ++I
Sbjct: 401 DHGINLDLLNK----PANQVKQSRTTILVKNIPFNENTEKLKQELYDLFAFKTRRISRLI 456
Query: 526 LPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAV 585
+PS++T+AL+ F EPVEA AF LAYK + VPLYL+WAP VL + +K +
Sbjct: 457 IPSSRTIALIEFYEPVEARQAFTHLAYKNFYNVPLYLQWAPEGVLPPKKEEEKKEKKEE- 515
Query: 586 VGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRI 645
++ +++ V AD D +S LF+KNLNFKT +++LR+ F K
Sbjct: 516 -----QEKKEEKKKEGPVRVADEGDDNQQSTVLFIKNLNFKTTEDSLRELF----KSYNP 566
Query: 646 LSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHA------ 699
SV++ ++NGK S GFGF EF++V+ A +L LD H L++ +
Sbjct: 567 RSVRIV--VENGK--SKGFGFAEFNNVKEAVKAHEELHNAQLDNHILVIHYSNIQSNVKT 622
Query: 700 ------KKDEQVVKKAEKDKSST--KLLVRNVAFEAQRK 730
KK + K EK + T KL+VRNVAFEA R+
Sbjct: 623 STEPKLKKQDVSFKDEEKGVTVTFKKLVVRNVAFEATRQ 661
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 13/149 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+RI VK LP +VT + + F + G++TDAK+M+TK GKSR F +IG++ +EA AI
Sbjct: 35 TRIIVKGLPSHVTNSQFKKLFEEFGQVTDAKIMQTKTGKSRCFGYIGYKKHEEAVHAINE 94
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
+++++ +I E A D + P S++S K +A + T EK
Sbjct: 95 RHQTFIGMAKIIVEFALPYNDSRLDAPRSKHSNVK----------AATSASGVKSSTFEK 144
Query: 121 VTENDDPQLLEFLQVMQPRVKS-KMWAND 148
N+ ++ +FL V + + + K W ND
Sbjct: 145 KDVNE--EVDQFLNVGKKKASAPKFWEND 171
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP------STKTLALVVFLEPVEAAAAFKGL 550
+V+N+ ++++ +L ++F +G + V LP S + A + F+ P E AA++ L
Sbjct: 649 LVVRNVAFEATRQDLLQLFSAYGQVKTVRLPKKVGSNSHRGFAFIEFVSPKECHAAYQAL 708
Query: 551 AYKRYKGVPLYLEWA 565
+ G L +E++
Sbjct: 709 KHSHLYGRTLKIEFS 723
>gi|307192625|gb|EFN75799.1| Probable RNA-binding protein 19 [Harpegnathos saltator]
Length = 863
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 174/464 (37%), Positives = 269/464 (57%), Gaps = 51/464 (10%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++ + ESGR+F+RNL YT TED++R+ F K+G +SEV++ VDK T+R KG V + +PE
Sbjct: 316 EESIAESGRMFIRNLTYTTTEDDVRKLFEKYGPLSEVNLPVDKVTRRLKGFGTVTFLMPE 375
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A LD S+ GR+LH++P + K S + +L N + KQ++E + KA+ S
Sbjct: 376 HAIKAYTELDGSVLDGRMLHLLPGKAKTSLEDIDLSNL------SYKQKKELQNKATANS 429
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL--AVRIALGETQVIAETKKAL 469
+ WN+LF+ + V++ IA + +K +L+ E+ + AV++ALGETQ+ +TK L
Sbjct: 430 SHN--WNTLFLGQNAVMDAIATTYNTTKEKVLEDESKGMSAAVKLALGETQIAHDTKAFL 487
Query: 470 TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST 529
GV +++ + A K +RSN V LVKNLP + ++ +MF K G L +++LP +
Sbjct: 488 EENGVCLNTFNQ--APK----QRSNTVILVKNLPAQTKPADIREMFVKHGELGRIVLPPS 541
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ-SSTSKGNQ--KNDAVV 586
ALV FLEP EA AF LAY ++K +PLYLEWAP + + +S KG + K +
Sbjct: 542 GITALVEFLEPSEARKAFTKLAYTKFKHLPLYLEWAPDNSFTAPASKCKGKRDTKKSSNA 601
Query: 587 GEHDAKRALLEQQLEGVTDADI----------DPDRVESRSLFVKNLNFKTCDENLRKHF 636
E + A ++ E V +A+ +P+ +LFVKN+NF T E L+ +F
Sbjct: 602 EEAKGEEATQKESKENVNNANKKADADDADDEEPE--SDTTLFVKNINFSTTTEELKSYF 659
Query: 637 GEHIKEGRILSVKV--KKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALI 693
K GR+ V + KK KN G N+SMG+GF+ + A + LQ ++LDG +L
Sbjct: 660 S---KCGRLHYVMIATKKDPKNPGNNLSMGYGFVRYKRKYDADRALKTLQMSVLDGKSLE 716
Query: 694 LQLCHAKKDEQV----VKKAEK-----DKSSTKLLVRNVAFEAQ 728
L K+ E++ VK A K +++ TK+LVRNV F+A+
Sbjct: 717 L-----KRSERILTSDVKTARKKSKITEQTGTKILVRNVPFQAK 755
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 101/170 (59%), Gaps = 24/170 (14%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLPK +T+++L++ FS+KG +TD +L TKDGK R+FAFIG++TE++A+ A Y
Sbjct: 2 SRLIVKNLPKNITDNKLKELFSEKGIVTDVQLKYTKDGKFRRFAFIGYKTEEQAQLAQSY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRY----------SLKKEKEVSED--EKNPVL 108
F+KSY+++CRIS E +GDP+ PR WS+Y S K + +VS D E++ V
Sbjct: 62 FDKSYIESCRISVEKCANLGDPSKPRAWSKYATDSSHTADNSFKDKAKVSTDSSEESNVK 121
Query: 109 AA----------KRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWAND 148
+ KK +EK DDP +EF + +W ND
Sbjct: 122 SGKNNEKKEKKDNEEVKKALEK--HKDDPLFMEFFETHTGNNIKAIWRND 169
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL V+NLP T+++L+E FS+ G V++V + KD K + A++ Y E A A
Sbjct: 3 RLIVKNLPKNITDNKLKELFSEKGIVTDVQLKYTKDGKFRR-FAFIGYKTEEQAQLAQSY 61
Query: 360 LDNSIFQ 366
D S +
Sbjct: 62 FDKSYIE 68
>gi|116182074|ref|XP_001220886.1| hypothetical protein CHGG_01665 [Chaetomium globosum CBS 148.51]
gi|88185962|gb|EAQ93430.1| hypothetical protein CHGG_01665 [Chaetomium globosum CBS 148.51]
Length = 2009
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 228/794 (28%), Positives = 364/794 (45%), Gaps = 134/794 (16%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SR+ VKNLP ++E R FS +G E+TD KL+ +R+ F+G+++ ++A +A+K
Sbjct: 4 SRVFVKNLPPSISEAEFRKHFSAQGREVTDVKLI-----PNRRIGFVGYKSHEDAAKAVK 58
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIE 119
YFN+S++ RI ++A+ V +P + + K + + P AK G++ +
Sbjct: 59 YFNRSFIRMSRIGVDLAKPVSTTPPSQPAGAVANHRCKIADSNPRLPT--AKDGQRHGVH 116
Query: 120 K-------------------------VTENDDPQLLEFLQVM-QPRVKSKMWANDTLIGL 153
+ V + D +L E+L+VM P K++
Sbjct: 117 RGSALEPNGPSIEQPEDESSKKRKREVLDEADHKLQEYLEVMGHPTKKAR---------- 166
Query: 154 MADQKAK---VSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMD 210
DQ+A V ++ A+ T+ + + D A +A L D+
Sbjct: 167 --DQEASSGDVQPELASALPP-----TIMEAGESDDEYEDIPARHPKGSAQVSSLHVDIP 219
Query: 211 YFKSRVKKDWSDSESEDDSAGDDD------------DDDDGEEEEEEENDHNGDSNEECD 258
S +DSE +AGD DDD D +
Sbjct: 220 CIPS------ADSEHPMPAAGDGPAREAPQVSVDATDDDWLRSRTSRLLDLVDPDDPGFA 273
Query: 259 SIIKDSIHSGVGEEDANGEIVDPGNP------------SSSSKDVQQEVLESGRLFVRNL 306
+ + S+ + V + D +P + SS+DV + V ++ RLF+RNL
Sbjct: 274 TRVAPSVPAAVSAPEPQTPTADAADPELDGPNEDAPVQAGSSEDVAKLVEKTSRLFLRNL 333
Query: 307 PYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQ 366
Y +ED++REHFSKFGN+ E +SKG A + Y P +A A + D S+FQ
Sbjct: 334 SYNVSEDDIREHFSKFGNLEE---------GQSKGFAMIRYEQPAAAVDAFQA-DGSVFQ 383
Query: 367 GRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDT 426
GR++H++PA K+ + E S K + +K +EA+ ++ WNSLFM D
Sbjct: 384 GRIIHILPASAKRENKLDEFAISKLPLKKQ-----QLLKKKAEAASSSFNWNSLFMSQDA 438
Query: 427 VVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGK 486
V +A + GVSK +LLD AV+ A+ ET VI E K GVN+ + + G
Sbjct: 439 VNTAMAERLGVSKHELLDPTDASAAVKQAVAETTVIQEAKAYFATHGVNIEAFKSQQRGD 498
Query: 487 TDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAA 546
T LVKN+ ++S EL +F + G++ +V++P + T+A+V F +P AA
Sbjct: 499 TS--------ILVKNI-RNASIEELRTLFEEHGAVLRVLMPPSGTIAIVQFAQPAVCRAA 549
Query: 547 FKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDA 606
F AY R+K L+LE P + D D + + + + +
Sbjct: 550 FAKKAYSRFKESVLFLEKGPKGLFV-----------DHAAPPQDRPAGVQKPSVAELLER 598
Query: 607 DIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMG 663
D D++E+ SLFV+NLNF T E L F +G +S KVK K G+ +SMG
Sbjct: 599 DDAEDQLETASLFVRNLNFSTTTEGLTSAFKP--LDG-FVSAKVKTKTDPKKPGQVLSMG 655
Query: 664 FGFIEFDSVETATNVCRDLQGTILDGHALILQLCH-------AKKDEQVVKKAEKDKSST 716
FGF F + E A + + G +LD H L+++ H +K E + KKA + T
Sbjct: 656 FGFCAFKTKEQAQAALKVMDGYVLDAHKLLVKASHRGHDAAEERKREDLAKKAAAQR--T 713
Query: 717 KLLVRNVAFEAQRK 730
K++++N+ FEA +K
Sbjct: 714 KIVIKNLPFEASKK 727
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGN-VSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ES R+FV+NLP + +E E R+HFS G V++V ++ ++ I +V Y E A+
Sbjct: 1 MESSRVFVKNLPPSISEAEFRKHFSAQGREVTDVKLIPNRR------IGFVGYKSHEDAA 54
Query: 355 RAIEVLDNSIFQ 366
+A++ + S +
Sbjct: 55 KAVKYFNRSFIR 66
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R F + G+++++++ K + S GF F EF + + A N
Sbjct: 715 IVIKNLPFEASKKDVRALFSAY---GKLVALRLPKKFNH---TSRGFAFAEFSTAKEALN 768
Query: 678 VCRDLQGTILDGHALILQLCHAKK--DEQVVKKAEK 711
L+ T L G L+L A + E+ +K EK
Sbjct: 769 ALTALKDTHLLGRRLVLDFAEADEVDPEEQIKAMEK 804
>gi|408388514|gb|EKJ68198.1| hypothetical protein FPSE_11665 [Fusarium pseudograminearum CS3096]
Length = 855
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 266/469 (56%), Gaps = 39/469 (8%)
Query: 277 EIVDPGNPSSSSKDVQQEVLE----SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVV 332
E+V+P ++ + + ++LE + RLFVRNLPY+ATED+LRE F +FG V EVH+ V
Sbjct: 301 EVVEPAPVATGGEPAEDDLLEAIRRTSRLFVRNLPYSATEDDLRERFEQFGTVEEVHLPV 360
Query: 333 DKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ 392
+K + SKG A +L+ P A A + +D + FQGR++H++PA ++ + E S
Sbjct: 361 NK-SGTSKGFALILFTEPSGAVEAFQAMDRATFQGRIIHIIPASARRDTALDEFTLS--- 416
Query: 393 GTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAV 452
K +++ RK EAS NT WN+L+M D V ++A + GVSKS+LLD + D AV
Sbjct: 417 --KLPLKKQNMIRKKQEASTNTFNWNALYMSQDAVNASVANRLGVSKSELLDPTSADAAV 474
Query: 453 RIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELA 512
+ A+ ET VI ETK T GV+ LE F + KR + LVKN PY ++ EL
Sbjct: 475 KQAIAETSVIQETKSYFTANGVD---LEAFKSK-----KRGDTAILVKNFPYGTTIDELR 526
Query: 513 KMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ 572
K+F + G + +V++P + T+A+V F +P A +AF LAY+R L+LE APSD+
Sbjct: 527 KLFEESGPVLRVLMPPSGTIAIVQFSQPNYAKSAFGNLAYRRIGDSVLFLEKAPSDIF-- 584
Query: 573 SSTSKGNQKNDAVVGEHDAKRALLEQQL---EGVTDADIDPDRVESRSLFVKNLNFKTCD 629
+ G+Q AV + ++A Q L + ++ D + +E+ SLFV+NLNF T
Sbjct: 585 ---TGGDQLGQAVSLKD--RQAPTVQNLSVNDLLSRGDKPEEELETTSLFVRNLNFSTTT 639
Query: 630 ENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTI 686
L + F +G +S +VK + K G+ +SMGFGF+EF + A + + G +
Sbjct: 640 SRLAETF--QSLDG-FVSARVKTKMDPKKPGQTLSMGFGFVEFRTKGQAQAALKVMDGHV 696
Query: 687 LDGHALILQLCHAKKDEQVVKKAE-KDKSS----TKLLVRNVAFEAQRK 730
L+ H L ++ H D ++ E K K S TK++++N+ F+ +K
Sbjct: 697 LEDHTLAVKASHKGLDAAEERRREDKAKKSAGQRTKIIIKNLPFQTTKK 745
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ +L + D R FAF F T +EAE A+
Sbjct: 731 TKIIIKNLPFQTTKKDIRSLFGTYGQLRSVRLPKKADYTPRGFAFADFVTPREAENALNS 790
Query: 61 FNKSYLDTCRISCEIA 76
++L ++ + A
Sbjct: 791 LRDTHLLGRKLVLDFA 806
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 10/111 (9%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
++KNLP+ +++ ++ +FG +G L V LP + + A F+ P EA A L
Sbjct: 733 IIIKNLPFQTTKKDIRSLFGTYGQLRSVRLPKKADYTPRGFAFADFVTPREAENALNSLR 792
Query: 552 YKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEG 602
G L L++A +D + QK VG K AL QQL G
Sbjct: 793 DTHLLGRKLVLDFAEADAVDAEEEIAKMQKK---VGGQVNKVAL--QQLTG 838
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+T +++R FG + G++ SV++ K GF F +F + A N
Sbjct: 733 IIIKNLPFQTTKKDIRSLFGTY---GQLRSVRLPK---KADYTPRGFAFADFVTPREAEN 786
Query: 678 VCRDLQGTILDGHALILQLCHA 699
L+ T L G L+L A
Sbjct: 787 ALNSLRDTHLLGRKLVLDFAEA 808
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGN-VSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ S R+F++ LP +E + R+HFS G +++V ++ + I YV Y E AS
Sbjct: 1 MASSRIFIKGLPPNISEADFRKHFSAQGREITDVKLIPQRR------IGYVGYKTSEDAS 54
Query: 355 RAIEVLDNSIFQGRLLHVMPAR 376
+A++ + S + + V AR
Sbjct: 55 KAVKYFNRSYIRMSKIAVETAR 76
>gi|47226530|emb|CAG08546.1| unnamed protein product [Tetraodon nigroviridis]
Length = 944
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 172/467 (36%), Positives = 258/467 (55%), Gaps = 51/467 (10%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
+V ESGRLFVRNLPYT TE+EL+E F+K G +SE+H +D TK+SKG A++ Y IPE+A
Sbjct: 410 DVAESGRLFVRNLPYTCTEEELKELFTKHGPLSEMHFPIDSLTKKSKGFAFITYMIPENA 469
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
A+ LD IFQGR+LH++P S+ K+E +S + + +R+++ K S N
Sbjct: 470 VAALAQLDGHIFQGRMLHLLP-----STIKKEKADSDAGAPGSSSYKRQKDAKTKALSSN 524
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL----------------------- 450
+ WN+LF+ + V + IA K+ +KS +LD +N L
Sbjct: 525 SHNWNTLFLGTNAVADAIAEKYNTTKSQVLDHVSNHLYLSIPTNESLLWSYLCNLRSFQE 584
Query: 451 -----AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYD 505
AVR+ALGETQ++ ET++ L + V + S + +A RS V LVKNLP
Sbjct: 585 SAGSVAVRMALGETQIVQETRQFLLDNSVCLDSFSQAAA------PRSTSVILVKNLPAG 638
Query: 506 SSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
+ EL ++F GSL +V+LP + A+V FLEP EA AF LAY +++ VPLYLEWA
Sbjct: 639 VASSELEELFSAHGSLGRVLLPPSGLTAIVEFLEPTEAKRAFTRLAYSKFQHVPLYLEWA 698
Query: 566 PSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNF 625
P V + ++ + + +E + + + + + +LF+KNLNF
Sbjct: 699 PVGVF----VAAQQEEEPGKEEKVMEEEKNVEDGDKDDEEEEEEEESTPGSTLFIKNLNF 754
Query: 626 KTCDENLRKHFGEHIKEG-RILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQG 684
T ++ L++ F K G KK K+GK++SMG+GF+++ E A R LQ
Sbjct: 755 STTEQTLQEIFS---KCGKVKSCSVSKKKDKSGKSLSMGYGFVQYHKAEAAQKALRQLQH 811
Query: 685 TILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVRNVAFEA 727
+DGH L L++ ++VV K+ K ++ TKLLVRN+ F+A
Sbjct: 812 CNVDGHQLQLKISERATRKKVVSGKKKQVGKKQTGTKLLVRNIPFQA 858
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R + F+ G +TD L TKDGK R+F F+GFR+E+EA A+K+
Sbjct: 2 SRLIVKNLPNGMKEERFKSMFAAFGTVTDCTLKFTKDGKFRKFGFVGFRSEEEANRALKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
NKS++DT R++ EI + GDP + WS++S K + NP L + +K+T
Sbjct: 62 LNKSFVDTSRVTVEICKAFGDPTKAKAWSKHSQKPATDKPSISPNPALPDSKKKKETTST 121
Query: 121 VTEND-DPQLLEFLQVMQPRVKSKMWANDTL 150
+ D D + EFL V Q R ++ WANDTL
Sbjct: 122 LENLDEDQKFKEFLSVHQRRDQAPTWANDTL 152
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPVEAAAAFKG 549
LV+N+P+ +S EL ++F FG L V LP + + + F+ +A AF
Sbjct: 849 LLVRNIPFQASVRELRELFCTFGELKTVRLPKKAAGTGNHRGFGFIDFVTKQDAKKAFDA 908
Query: 550 LAYKRY-KGVPLYLEWA 565
L + + G L LEWA
Sbjct: 909 LCHSTHLYGRRLVLEWA 925
>gi|340721943|ref|XP_003399372.1| PREDICTED: probable RNA-binding protein 19-like [Bombus terrestris]
Length = 901
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 166/462 (35%), Positives = 259/462 (56%), Gaps = 48/462 (10%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++ + ESGR+F+RNL YT TED +R+ F K+G +SEV++ +D+ T++ KG V + +PE
Sbjct: 352 EESIAESGRMFIRNLSYTITEDNIRQLFEKYGPLSEVNLPIDRTTRKPKGFGTVAFLMPE 411
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A LD SI GR+LHV+PA+ KS +EL K L ++++E KA +
Sbjct: 412 HAVKAYSELDGSILDGRMLHVLPAK-AKSDPMEELDK------KGLTYKQKKELKAKITA 464
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL--AVRIALGETQVIAETKKAL 469
G++ WN+LF+ + V + IA + +K +L+ + L AV++ALGETQ++ ++KK L
Sbjct: 465 GSSHNWNTLFLGQNAVADTIAATYNTTKEKVLEDGSKGLSAAVKLALGETQLVQDSKKFL 524
Query: 470 TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST 529
GV L+ F+ KRS V LVKNLP S E+ ++F + G L + ++P +
Sbjct: 525 EENGV---CLDAFNQPPN---KRSKTVILVKNLPAASPAQEIRQLFARHGELGRFVMPPS 578
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH 589
ALV FLEP EA AF LAY +YK +PLYLEWAP + + + N+ + E
Sbjct: 579 GITALVEFLEPSEARKAFTQLAYTKYKHLPLYLEWAPDNSFTTPPPAGKNKATEVGTNEK 638
Query: 590 DAKRALLEQQLEGVTDADIDPDRVESR------------SLFVKNLNFKTCDENLRKHFG 637
+ + +++Q E +++ D ++ +LFVKN+NF T +E L+ +FG
Sbjct: 639 NNIKE-VDKQAEEFSESINDTNKANKEESEDEDEPEQETTLFVKNINFTTTEEQLKTYFG 697
Query: 638 EHIKEGRI--LSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALIL 694
K G + +S+ KK KN G +SMG+GF+ + A + LQ T+L+G L L
Sbjct: 698 ---KCGALHYVSIATKKDPKNPGAKLSMGYGFVRYKRKVDADRALKVLQMTVLEGKTLEL 754
Query: 695 Q---------LCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
+ L AKK +V ++ TK+L+RNV F+A
Sbjct: 755 KRSERTLTTDLKSAKKTSKVTA-----QTGTKILIRNVPFQA 791
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 134/238 (56%), Gaps = 26/238 (10%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLPK VT+ +L++ FS+KG ITD +L TKDGK R+FAFIG +TE++A +Y
Sbjct: 2 SRLIVKNLPKNVTDTKLKELFSEKGLITDVQLKYTKDGKFRRFAFIGLKTEEQATAVKEY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEK---------EVSED--------E 103
F+++ +DTC+IS E +GD + PR WS+Y+ K E++E+ +
Sbjct: 62 FDQTCIDTCKISIEQCASLGDSSKPRAWSKYAPDSSKGKIHNKDSTEITENIAIVDEEKD 121
Query: 104 KNPVLAAKRGEKKTIEKVTE--NDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKV 161
+N + G +K I + E DDP +EFL+ +W NDT++ + Q ++
Sbjct: 122 RNKKGKKEEGVQKEIREALEKHKDDPLFMEFLESHA--TDKAIWKNDTILATI--QTKEL 177
Query: 162 SENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKD 219
S+N IK ++ + K D + + ++ + AD+++SD++Y +S +K+
Sbjct: 178 SDNEVNDIKSSDQ---YNDKEDSKEEDDEEEERKEKEPKIADKVISDLEYMESLKRKE 232
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPST-------KTLALVVFLEPVEAAAAFKG 549
L++N+P+ ++ E+ ++F FG L V LP + A V + EA AFK
Sbjct: 782 ILIRNVPFQATVEEVTELFKAFGELKAVRLPKKLVGVEKHRGFAFVEYYTKSEAKKAFKA 841
Query: 550 LAYKRY-KGVPLYLEWAPSD 568
L + G L LEWA ++
Sbjct: 842 LCQSTHLYGRRLVLEWAQTE 861
>gi|198415693|ref|XP_002128145.1| PREDICTED: similar to RNA binding motif protein 19 [Ciona
intestinalis]
Length = 766
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 247/444 (55%), Gaps = 45/444 (10%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+++ ESGRL+VRNLPYTATE++L HF FG +SEV I VD +K+S G ++ Y +PE
Sbjct: 247 EDISESGRLYVRNLPYTATEEDLENHFKSFGPLSEVSIPVDDMSKKSVGFGFITYMMPEH 306
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG 412
A +A LD + FQGR++H++PA+ K + +S+ KQ ++ K S S
Sbjct: 307 ALKAFNSLDGTAFQGRMIHILPAKAK-------VEKRSSENPSDFKQGKQAALKQSSQSS 359
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLL-DREANDLAVRIALGETQVIAETKKALTN 471
+ WN+LFM D VV+ +A K+ KS++L + + AVR+ALGET ++ ET++ L
Sbjct: 360 HN--WNALFMGTDAVVDALAEKYNGDKSEILTSTKQHTAAVRVALGETLLVQETREFLLK 417
Query: 472 AGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT 531
G+ SL+ FS + RS V + KNLP S+ EL +MF KF L +V+L
Sbjct: 418 NGI---SLDAFSQPNAE---RSKTVIIAKNLPVGSTCSELREMFAKFAELGRVVLAPAGV 471
Query: 532 LALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDA 591
A++ L+P EA AF LAY+++ PLYLEWAP T K N K GE ++
Sbjct: 472 TAVIECLKPAEAKLAFTKLAYRKFHHSPLYLEWAP------VGTFKTNFKE--FSGEAES 523
Query: 592 KRALLEQQLEGVTDADIDPDRVESR----SLFVKNLNFKTCDENLRKHFGEHIKEGRILS 647
T+ D + VE+ ++FVKNLNF T +E+L+ HF E +
Sbjct: 524 ------------TEVKEDSEEVENTEEDFTIFVKNLNFSTDEESLKTHFSS-CGELKSCL 570
Query: 648 VKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVK 707
+ KK K+ +SMG+GF+ + + + LQGT+LD H L L++ K +
Sbjct: 571 ISRKKTHKSNALLSMGYGFVCYARKKDGQKALKTLQGTMLDEHKLELKMSERKTNSNTSA 630
Query: 708 K----AEKDKSSTKLLVRNVAFEA 727
K +K ++S+K+LVRNV F+A
Sbjct: 631 KRRFQLDKKQASSKILVRNVPFQA 654
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E++L+ F G ITD KLM +K GK R+FAF+G++ + A++A
Sbjct: 2 SRLIVKNLPSKINEEKLKKEFEPYGTITDVKLMFSKSGKFRRFAFVGYQFTENADKAKSK 61
Query: 61 FNKSYLDTCRISCEIARKVG 80
+KS + +IS E G
Sbjct: 62 LDKSLILNQKISVETCNDFG 81
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 117/303 (38%), Gaps = 46/303 (15%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAI-PESASRAIEV 359
+ +NLP +T ELRE F+KF + V + G+ V+ + P A A
Sbjct: 437 IIAKNLPVGSTCSELREMFAKFAELGRVVLA-------PAGVTAVIECLKPAEAKLAFTK 489
Query: 360 LDNSIFQGRLLHV--MPARHKKSS---------------DKQELHNSTSQGT---KTLKQ 399
L F L++ P K++ D +E+ N+ T K L
Sbjct: 490 LAYRKFHHSPLYLEWAPVGTFKTNFKEFSGEAESTEVKEDSEEVENTEEDFTIFVKNLNF 549
Query: 400 RREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGET 459
+EE + S + + L R T N G ++ A++ G
Sbjct: 550 STDEESLKTHFSSCGELKSCLISRKKTHKSNALLSMGYGFVCYARKKDGQKALKTLQGTM 609
Query: 460 --QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGK 517
+ E K + N S+ F K K+++ LV+N+P+ ++ GE+ +F
Sbjct: 610 LDEHKLELKMSERKTNSNTSAKRRFQLDK----KQASSKILVRNVPFQANSGEIESLFKS 665
Query: 518 FGSLDKVILP-----------STKTLALVVFLEPVEAAAAFKGLAYKRY-KGVPLYLEWA 565
FG L V +P S + A V FL EA AF+ L + + G L LEWA
Sbjct: 666 FGELKSVRMPKKVGSITAQAGSHRGFAFVDFLTKQEAKKAFEALCHSTHLYGRRLVLEWA 725
Query: 566 PSD 568
++
Sbjct: 726 DAE 728
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL V+NLP E++L++ F +G +++V ++ K K + A+V Y E+A +A
Sbjct: 3 RLIVKNLPSKINEEKLKKEFEPYGTITDVKLMFSKSGKFRR-FAFVGYQFTENADKAKSK 61
Query: 360 LDNSI 364
LD S+
Sbjct: 62 LDKSL 66
>gi|402592999|gb|EJW86926.1| RNA recognition domain-containing protein [Wuchereria bancrofti]
Length = 890
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 302/584 (51%), Gaps = 63/584 (10%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LP TE++LR+ F G+ITD L T+DGK R+FAF+GF T++ A++A
Sbjct: 2 SRLIVKGLPSNCTEEKLRNHFKSFGKITDCSLKYTRDGKFRRFAFVGFETDENAQKARDN 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS-----LKKEKEVSEDEKNPVLAAKRGEK 115
+ +++ T R++ E + GD PR WS+Y+ K+ E+EK + + RG
Sbjct: 62 LHSAFMGTSRLTVEECKPFGDETKPRAWSKYAKGSSAYKRLHPKEEEEKTKKIISVRGSS 121
Query: 116 KTIEKVTENDDPQLLEFLQVMQPRVK-SKMWANDTLIGLMADQKAKVS--ENISQAIKGG 172
+ +K+ + +D + +F++V + + + ++ LM + + VS ++S I+G
Sbjct: 122 PSAKKMRKENDKEFYDFIEVQKSALPVASSSNDENNNNLMEELLSGVSGDTSLSLIIRGL 181
Query: 173 EKSITLHVKSDKSNVITDSQATEKSKNA----AADELMSDMDYFKSRVKKDWSDSESEDD 228
K++ K+ I D + K K + E ++ + +FK ES+
Sbjct: 182 PKTV-------KTKGIKDWFSPVKLKGIKIVRGSAEAIAFVTFFK----------ESDVK 224
Query: 229 SAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSS 288
A ++ G + E SN D ++D +H E + +
Sbjct: 225 KALKRNEQFFGGSKLEIAKVL---SNRFSDEDVEDYVHM-TREAEVEASVA--------- 271
Query: 289 KDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYA 348
++LE+GRLFVRNLPY ++++LR F K+G +S++ ++V K T KG A V Y
Sbjct: 272 -----KILETGRLFVRNLPYVCSDEDLRYLFKKYGEISDLQMIVSKKTGLCKGFAIVTYV 326
Query: 349 IPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHN-STSQGTKTLKQRREEERKA 407
PESA A LD SI +GR+LH++P K+ ++ + S Q TK K ++E
Sbjct: 327 FPESAVAAFSALDGSILKGRMLHILPGEEKREMEQIGITGKSAFQKTKIAKLKKE----- 381
Query: 408 SEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLA-VRIALGETQVIAETK 466
+G + +WN+LF+ + V E +A K V KSDLL + A VR+AL ET++++ET+
Sbjct: 382 ---AGKSHSWNTLFLGANAVAETLAEKLDVGKSDLLLGQGEISAGVRMALAETRLVSETR 438
Query: 467 KALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVIL 526
+ L G+ L+ FS KRSN V ++KNL EL +MF + G + ++++
Sbjct: 439 EYLLANGI---CLDVFS---RPAAKRSNTVIIIKNLTTKVDTEELKRMFARHGPVKQLLM 492
Query: 527 PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
P A++ PV+A AF LAY R++ PL+LEWAP D+
Sbjct: 493 PPGGVTAILEMENPVDAQKAFNTLAYTRFRSQPLFLEWAPYDLF 536
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+LFVKNL+FKT DE LR F + K + K +SMGFGFI F E A
Sbjct: 666 TLFVKNLSFKTTDEGLRNKFESRFRVRSATVSKKRDATDATKALSMGFGFITFYQPEDAQ 725
Query: 677 NVCRDLQGTILDGHALILQLCHAK-KDEQVVKKAEKDK----SSTKLLVRNVAFEAQRK 730
+D+QG +LDGH L+L+L H + ++++ + DK +TK+L+RN+ F+A RK
Sbjct: 726 QAIKDMQGVLLDGHCLMLKLSHREVVSDKIIARKGVDKLEQGEATKILIRNIPFQATRK 784
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPST-----KTLALVVFLEPVEAAAAFKGLAY 552
L++N+P+ ++ E+ ++F FG + +P + V FL +A AF GL +
Sbjct: 773 LIRNIPFQATRKEVKQLFATFGEIRAFRMPKKAAEGHRGFGFVDFLTRADARRAFNGLVH 832
Query: 553 K-RYKGVPLYLEWAPSD 568
+ G L LEWA D
Sbjct: 833 STHFYGRRLVLEWAKPD 849
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 280 DPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHF-SKF----GNVSEVHIVVDK 334
D G+ ++ KD Q +L LFV+NL + T++ LR F S+F VS+ D
Sbjct: 648 DDGDDNAKEKDDQ--LLPGTTLFVKNLSFKTTDEGLRNKFESRFRVRSATVSKKRDATDA 705
Query: 335 DTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK 383
S G ++ + PE A +AI+ + + G L + + + SDK
Sbjct: 706 TKALSMGFGFITFYQPEDAQQAIKDMQGVLLDGHCLMLKLSHREVVSDK 754
>gi|118375162|ref|XP_001020766.1| probable RNA-binding protein [Tetrahymena thermophila]
gi|89302533|gb|EAS00521.1| probable RNA-binding protein [Tetrahymena thermophila SB210]
Length = 718
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 218/752 (28%), Positives = 375/752 (49%), Gaps = 122/752 (16%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKN+P V E +L++ FS+ G +TDAK+ K K R+F FIG+++E +A +A +Y
Sbjct: 3 SRLIVKNIPTNVDEKKLKEIFSKFGSVTDAKVC-LKGQKHRRFCFIGYKSEADATKAKEY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKE---------KEVSEDEKNPVLAAK 111
FN +Y+ +I + A+ DPN+ + K+E K+V ++E+ P
Sbjct: 62 FNNTYIQMNKIQVDFAKTSDDPNIVNQKNLKFKKREGQQQDQKLQKKVKKNEEQPSEVPT 121
Query: 112 RGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKG 171
+ T E+ E EF ++M+ K M ND L + + K
Sbjct: 122 NSSELTAEQKFE-------EFKKLMKAGSKGTMSWNDVLTTIKS--------------KP 160
Query: 172 GEKSITLHVKSDK--SNVITDSQATEKSKNA--AADELMSDMDYFKSRVKKDWSDSESED 227
+K + K+DK N D + E A A D+L D KS+
Sbjct: 161 TKKELKNQAKNDKKKGNNQDDDEEGENVNFAQTALDDLDKQFDKIKSK------------ 208
Query: 228 DSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSS 287
S G++++D+ ++E+EE + + D+ ++ SSS
Sbjct: 209 KSKGNNENDNTNQDEQEENQEVSQDAKQK---------------------------NSSS 241
Query: 288 SKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
+ D +++ RL+V NLPY TE+E+++ F K+G + E+ + K + +G AY+ Y
Sbjct: 242 NND---PMIDDCRLYVLNLPYDITEEEVKDVFRKYGKLLEIKMPKGKGG-QFRGFAYITY 297
Query: 348 AIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLK-----QRRE 402
++ A RA LDN I GR+LH+ PA K++ +++ + K ++ +++
Sbjct: 298 SMAGEAMRAFAELDNKIQFGRILHIRPA-FKENKSEEQKKIEEEKAQKDIEFEKSSFKKQ 356
Query: 403 EERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI 462
++ + ++ + WN+LF+ P+T++E +A ++ + KSD+L +A + AVRIA ETQ+I
Sbjct: 357 KKSELKKSLNDDTNWNTLFLNPNTILETVASRYNIKKSDILSPDAENAAVRIAHAETQII 416
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
AETK+ + G+N+ +F +RSN+ LVKN+ + +F ++G +
Sbjct: 417 AETKEWMLKQGLNL----DFLNTDRKNCERSNNTILVKNISSKVEQDSFKDLFSRYGYVS 472
Query: 523 KVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN 582
K +L K + +V F + A AF+ L+Y K PLYLEWAP
Sbjct: 473 KFLLAPNKAIGVVQFEDQSHALNAFEKLSYFSVKNNPLYLEWAP---------------- 516
Query: 583 DAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKE 642
+G D ++A E++ E + ++ S+ L++KNL+F T + L+ F E K
Sbjct: 517 ---LGMIDVEQAEEEKEKEIEIEDEL------SKILYIKNLSFNTTESTLQSLF-EKAKV 566
Query: 643 GRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD 702
G I SVK+ K+ K S G+GF+EF E + LQ ++LDGH++ L + +K+
Sbjct: 567 GTIRSVKIVKN----KGQSQGYGFVEFSDHEAVIKSIKKLQNSLLDGHSIQLSVSKKEKN 622
Query: 703 EQVVKKAEKDKS----STKLLVRNVAFEAQRK 730
+ K+ ++ + STKL++RN+AFE +K
Sbjct: 623 DPKKKERKQKQVDIPISTKLVIRNLAFECTKK 654
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S RL V+N+P E +L+E FSKFG+V++ + + R ++ Y A++A
Sbjct: 2 SSRLIVKNIPTNVDEKKLKEIFSKFGSVTDAKVCLKGQKHRR--FCFIGYKSEADATKAK 59
Query: 358 EVLDNSIFQGRLLHV 372
E +N+ Q + V
Sbjct: 60 EYFNNTYIQMNKIQV 74
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ ++NL T+ +RD GE+ +L + +G+ R FAF F + +EA+ A
Sbjct: 640 TKLVIRNLAFECTKKEVRDLLKVYGEVKSVRLPKKMNGQHRGFAFAEFSSAEEAKNAFTA 699
Query: 61 FNKSYLDTCRISCEIAR 77
++L +++ E A+
Sbjct: 700 LENTHLYGRKLAIEWAK 716
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 289 KDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYA 348
K Q ++ S +L +RNL + T+ E+R+ +G V V + K + +G A+ ++
Sbjct: 630 KQKQVDIPISTKLVIRNLAFECTKKEVRDLLKVYGEVKSVRL-PKKMNGQHRGFAFAEFS 688
Query: 349 IPESASRAIEVLDNSIFQGRLLHVMPAR 376
E A A L+N+ GR L + A+
Sbjct: 689 SAEEAKNAFTALENTHLYGRKLAIEWAK 716
>gi|21064855|gb|AAM29657.1| SD14970p [Drosophila melanogaster]
Length = 918
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 165/488 (33%), Positives = 269/488 (55%), Gaps = 64/488 (13%)
Query: 279 VDPGNP----SSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDK 334
VD GN S + ++ ESGR+F RNL YT TE++LR+ F +FG V EV++ +DK
Sbjct: 340 VDAGNAKWKHQQDSLSKEDDISESGRIFFRNLAYTTTEEDLRKLFEQFGPVVEVNLPLDK 399
Query: 335 DTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGT 394
T++ KG V Y +PE A +A LD + F GRLLH++P++ + + K++L + + +
Sbjct: 400 LTRKIKGFGTVTYMMPEHALKAFNTLDGTDFHGRLLHLLPSKDIEKNPKEDLDENDASLS 459
Query: 395 KTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE--ANDLAV 452
K+ + ++ A + G WN+LF+ + V E +A++ SK +LD + AV
Sbjct: 460 FKEKKALKLKKNAQKPIG----WNTLFLGANAVAEILAKQFKTSKERILDTSDGGSSAAV 515
Query: 453 RIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELA 512
R+ALGETQV+ E K+ L GV + + +E KRSN V L KNLP + E+
Sbjct: 516 RLALGETQVVIEMKRFLEEEGVRLDAFDE------PAKKRSNTVILAKNLPAATEISEIT 569
Query: 513 KMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ 572
+F +FG + +++LP + AL+ + +P+EA AFK LAY ++K PLYLEWAP V ++
Sbjct: 570 PIFSRFGPIGRIVLPPSGVTALIEYCDPLEARQAFKKLAYSKFKNAPLYLEWAPEQVFTK 629
Query: 573 SST---------------SKGNQK---NDAVVGEHDAKRALLEQQLEGVTDADIDPDRVE 614
+ + +K +K NDA E D++ DAD +P+
Sbjct: 630 TLSGEPVIPKSEPKPKEEAKPEEKPIVNDAKPDEEDSR----------AEDADDEPE--P 677
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNV-SMGFGFIEFDSVE 673
+ +LF++NLNFKT E + KHF H+ + + ++ +N + S+G+GFI+F
Sbjct: 678 NTTLFLRNLNFKTVQETVEKHF-RHLGSIHTVEIAKRRDPENPREFKSLGYGFIQFKKSS 736
Query: 674 TATNVCRDLQGTILDGHALILQLCHAKKDEQVVKK-----------AEKDKSSTKLLVRN 722
A + ++LQ T +DG+ + L K+ ++V+K ++K ++ TK+LVRN
Sbjct: 737 VAEHALKNLQLTHIDGNPVEL-----KRSDRVLKTQDNDGAQRRLASQKKQTGTKILVRN 791
Query: 723 VAFEAQRK 730
+ F+AQ +
Sbjct: 792 IPFQAQYR 799
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 16/164 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LPK++TED+LR F +G ITD +L T DGK RQF F+G+ TE+EA+ AI++
Sbjct: 2 SRIIVKQLPKHITEDKLRQIFGAQGTITDLQLKYTPDGKFRQFCFVGYSTEEEAQSAIRH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEK---EVSEDEKNPVLAAKRGEKKT 117
F+ + + T R+ E +G + P+ WS+Y+ +K ++ E E+ AK EKK
Sbjct: 62 FDNTCIQTSRVRVESCAALGSEDKPQSWSKYAKDSKKNLDKLKEKEREAAAKAKESEKKK 121
Query: 118 IEKVT---------ENDDPQLLEFLQVMQPRVKSK-MWANDTLI 151
+ DDP+ EFL+ KS+ +W ND I
Sbjct: 122 KKDKVDKVDQILSRHKDDPEFQEFLEAHD---KSRTLWGNDLGI 162
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ V+ LP TED+LR+ F G ++++ + D K + +V Y+ E A AI
Sbjct: 3 RIIVKQLPKHITEDKLRQIFGAQGTITDLQLKYTPDGK-FRQFCFVGYSTEEEAQSAIRH 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDK-QELHNSTSQGTKTLKQRREEER 405
DN+ Q + V S DK Q K L + +E+ER
Sbjct: 62 FDNTCIQTSRVRVESCAALGSEDKPQSWSKYAKDSKKNLDKLKEKER 108
>gi|195326391|ref|XP_002029912.1| GM25167 [Drosophila sechellia]
gi|194118855|gb|EDW40898.1| GM25167 [Drosophila sechellia]
Length = 917
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 268/487 (55%), Gaps = 63/487 (12%)
Query: 279 VDPGNP----SSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDK 334
VD GN S + ++ ESGR+F RNL YT TE++LR+ F +FG V EV++ +DK
Sbjct: 340 VDAGNAKWKHQQDSLSKEDDISESGRIFFRNLAYTTTEEDLRKLFEQFGPVVEVNLPLDK 399
Query: 335 DTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGT 394
T++ KG V Y +PE A +A LD + F GRLLH++P++ + + K++L + + +
Sbjct: 400 LTRKIKGFGTVTYMMPEHALKAFNTLDGTDFHGRLLHLLPSKDIEKNPKEDLDENDASLS 459
Query: 395 KTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE--ANDLAV 452
K+ + ++ A + G WN+LF+ + V E +A++ SK +LD + AV
Sbjct: 460 FKEKKALKLKKNAQKPIG----WNTLFLGANAVAEILAKQFKTSKERILDTSDGGSSAAV 515
Query: 453 RIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELA 512
R+ALGETQV+ E K+ L GV + + +E KRSN V L KNLP + E+
Sbjct: 516 RLALGETQVVIEMKRFLEEEGVRLDAFDE------PAKKRSNTVILAKNLPAATEISEIT 569
Query: 513 KMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ 572
+F +FG + +++LP + AL+ + +P+EA AFK LAY ++K PLYLEWAP V S+
Sbjct: 570 PIFSRFGPIGRIVLPPSGVTALIEYCDPLEARQAFKKLAYSKFKNAPLYLEWAPEQVFSK 629
Query: 573 SST--------------SKGNQK---NDAVVGEHDAKRALLEQQLEGVTDADIDPDRVES 615
+ + +K +K ND E D++ DAD +P+ +
Sbjct: 630 TLSGEPVIPKSEPKPEEAKPEEKPIVNDVKAEEEDSR----------AEDADDEPE--PN 677
Query: 616 RSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNV-SMGFGFIEFDSVET 674
+LF++NLNFKT E + KHF H+ + + ++ +N + S+G+GFI+F
Sbjct: 678 TTLFLRNLNFKTVQETVEKHF-RHLGSIHTVEIAKRRDPENPREFKSLGYGFIQFKKSSV 736
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKDEQVVKK-----------AEKDKSSTKLLVRNV 723
A + ++LQ T +DG+ + L K+ ++V+K ++K ++ TK+LVRN+
Sbjct: 737 AEHALKNLQLTHIDGNPVEL-----KRSDRVLKTQDNDGAQRRLASQKKQTGTKILVRNI 791
Query: 724 AFEAQRK 730
F+AQ +
Sbjct: 792 PFQAQYR 798
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 95/164 (57%), Gaps = 16/164 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LPK++TED+LR F +G ITD +L T DGK RQF F+G+ TE+EA+ AI++
Sbjct: 2 SRIIVKQLPKHITEDKLRQIFGAQGTITDLQLKYTPDGKFRQFCFVGYSTEEEAQSAIRH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS---------LK-KEKEVSEDEKNPVLAA 110
F+ + + T R+ E +G + P+ WS+Y+ LK KE+E ++ K
Sbjct: 62 FDNTCIQTSRVRVESCAALGSEDKPQSWSKYAKDSKKNLDKLKEKEREAADKAKESEKKK 121
Query: 111 KRGEKKTIEKVT--ENDDPQLLEFLQVMQPRVKSK-MWANDTLI 151
K+ + ++++ DDP+ EFL+ KS+ +W ND I
Sbjct: 122 KKEKVDKVDQILSRHKDDPEFQEFLEAHD---KSRTLWGNDLGI 162
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ V+ LP TED+LR+ F G ++++ + D K + +V Y+ E A AI
Sbjct: 3 RIIVKQLPKHITEDKLRQIFGAQGTITDLQLKYTPDGK-FRQFCFVGYSTEEEAQSAIRH 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDK-QELHNSTSQGTKTLKQRREEERKAS 408
DN+ Q + V S DK Q K L + +E+ER+A+
Sbjct: 62 FDNTCIQTSRVRVESCAALGSEDKPQSWSKYAKDSKKNLDKLKEKEREAA 111
>gi|383847362|ref|XP_003699323.1| PREDICTED: probable RNA-binding protein 19-like [Megachile
rotundata]
Length = 886
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 169/468 (36%), Positives = 266/468 (56%), Gaps = 64/468 (13%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++ + ESGR+FVRNL YT TED++R+ F K+G ++EV++ +DK T++ KG + + +PE
Sbjct: 343 EETIAESGRMFVRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDKVTRKPKGFGTITFLMPE 402
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSS----DKQELHNSTSQGTKTLKQRREEERKA 407
A +A LD SI GR+LH++P + K S D+++L T KQ++E + KA
Sbjct: 403 HAVKAYSELDGSILDGRMLHLLPGKAKSSPLENLDEKDL---------TYKQKKELKDKA 453
Query: 408 SEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL--AVRIALGETQVIAET 465
+ +G++ WN+LF+ + V + IA + +K +L+ + L AV++ALGETQ++ +T
Sbjct: 454 T--AGSSHNWNTLFLGQNAVADAIASMYSTTKEKVLEDGSKGLSAAVKLALGETQLVQDT 511
Query: 466 KKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVI 525
K L GV L+ F+ + KRS V LVKNLP ++ E+ ++F G L +V+
Sbjct: 512 KNFLEEQGV---CLDAFNQAPS---KRSKTVLLVKNLPAATTVREIRQLFAPHGELGRVV 565
Query: 526 LPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS---QSSTSKGNQKN 582
+P + ALV FLEP EA AF LAY ++K +PLYLEWAP + + ++S K QK
Sbjct: 566 MPPSGVTALVEFLEPSEARKAFSKLAYTKFKHLPLYLEWAPDNSFTAPAKASDVKPEQKT 625
Query: 583 DAVVGEHDAKRALLEQQLEGVTD-----------ADIDPDRVESRSLFVKNLNFKTCDEN 631
+ + + + K +E+ E V D + +PD +LFVKN+NF T +E
Sbjct: 626 EKKIEQKNLK---VEESAENVKDENKEKEESEEEEESEPD----TTLFVKNINFATTEEQ 678
Query: 632 LRKHFGEHIKEGRI--LSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILD 688
L +F K G + S+ KK +KN G +SMG+GF+ + A + LQ T+LD
Sbjct: 679 LHSYFS---KCGPLSYASIATKKDVKNPGGKLSMGYGFVRYKRKADADRALKVLQMTVLD 735
Query: 689 GHALILQ---------LCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
G L L+ + +AKK +V +++ TK+L+RNV F+A
Sbjct: 736 GKTLELKRSERTLTTDVTNAKKTSKVT-----EQTGTKILIRNVPFQA 778
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 99/170 (58%), Gaps = 23/170 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLPK +T+ +LR+ FSQKG +TD +L TKDGK R+FAFIGF+TE++A A +Y
Sbjct: 2 SRLIVKNLPKTITDKKLREHFSQKGLVTDVQLKYTKDGKFRRFAFIGFKTEEQALAAKEY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDE--KNPVLAAKRGE---- 114
F+K+ +DTCRI+ E +GD + PR WS+Y+ K + D+ KN L+ E
Sbjct: 62 FDKTCIDTCRITIEQCASLGDSSKPRAWSKYAPDSSKSLENDKNSKNESLSETTDESKKE 121
Query: 115 -------------KKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLI 151
K+ +EK DDP +EFL+ +W NDT +
Sbjct: 122 KKKKKDKNVASEVKEALEK--HKDDPLFVEFLESHTSN--KAVWKNDTTL 167
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL V+NLP T T+ +LREHFS+ G V++V + KD K + A++ + E A A E
Sbjct: 3 RLIVKNLPKTITDKKLREHFSQKGLVTDVQLKYTKDGKFRR-FAFIGFKTEEQALAAKEY 61
Query: 360 LDNS 363
D +
Sbjct: 62 FDKT 65
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 17/134 (12%)
Query: 444 DREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGL-KRSNHVFLVKNL 502
DR L + + G+T + +++ LT N A KT + +++ L++N+
Sbjct: 723 DRALKVLQMTVLDGKTLELKRSERTLTTDVTN--------AKKTSKVTEQTGTKILIRNV 774
Query: 503 PYDSSEGELAKMFGKFGSLDKVILPST-------KTLALVVFLEPVEAAAAFKGLAYKRY 555
P+ ++ E+ ++F FG L V LP + V + EA AFK L +
Sbjct: 775 PFQANVHEITELFKAFGELKAVRLPRKLVGVEKHRGFGFVEYYTKGEAKKAFKALGQSTH 834
Query: 556 -KGVPLYLEWAPSD 568
G L LEWA ++
Sbjct: 835 LYGRRLVLEWAQTE 848
>gi|345490259|ref|XP_001605134.2| PREDICTED: probable RNA-binding protein 19-like [Nasonia
vitripennis]
Length = 904
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 260/460 (56%), Gaps = 43/460 (9%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++ V ESGR+F+RNL YTATED++R+ F +G +SEV++ +D T++ KG V + +PE
Sbjct: 352 EENVAESGRIFLRNLSYTATEDDIRKLFETYGPLSEVNLPIDMVTRKPKGFGTVTFLMPE 411
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A LD S+ GR+LH++PA+ K S + + L ++++E KA A+
Sbjct: 412 HAVKAYSELDGSVLNGRMLHLLPAKTKTSPEDLLAQDG-------LSFKQKKELKAKAAA 464
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN--DLAVRIALGETQVIAETKKAL 469
G++ WN+LF+ P+ V + IA + +K ++L N +AVR+ALGETQ++ ET+K L
Sbjct: 465 GSSHNWNTLFLGPNAVADAIANAYNTTKENVLQDGDNGASVAVRLALGETQLVQETQKFL 524
Query: 470 TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST 529
GV++++ + RS V LVKNLP + E+ +MF K G L +V+LP +
Sbjct: 525 EENGVHLNAFNQAPKA------RSKTVILVKNLPAGTHIREIREMFAKHGELGRVVLPPS 578
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS----QSSTSKGNQKNDAV 585
ALV F+EP EA AF LAY ++K +PLYLEWAP D + +S+ K + ++ V
Sbjct: 579 GITALVEFIEPSEARKAFMRLAYSKFKHLPLYLEWAPDDSFTSAPPKSAKGKTDTADEKV 638
Query: 586 VGEHDAKRALLEQQLEGVTD----------ADIDPDRVESRSLFVKNLNFKTCDENLRKH 635
A+ + EG TD + + + +LFVKNL+F+T +E LRKH
Sbjct: 639 RNNTKGNGAV---KAEGGTDNKNEAKESDDEEDEDEPEPDTTLFVKNLDFRTTEEQLRKH 695
Query: 636 FGEHIKEGRI--LSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHAL 692
F K G++ SV KK KN G +SMG+GF+ + ++LQ + LDG L
Sbjct: 696 FS---KCGKLHYASVSTKKDPKNPGNKLSMGYGFVRYKFKSDCERALKELQTSNLDGKTL 752
Query: 693 ILQLCHAKKDEQVVKKAEK-----DKSSTKLLVRNVAFEA 727
L+ V+ A+K +++ TK+LVRNV F+A
Sbjct: 753 DLKRSERTLQTDVITTAKKTSKITEQTGTKILVRNVPFQA 792
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 95/182 (52%), Gaps = 31/182 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLPK VTE +L++ FS+KG +TD +L T+D K R+F F+G++TE EA A+ +
Sbjct: 2 SRLIVKNLPKNVTETKLKELFSEKGIVTDVQLKYTEDRKFRRFGFVGYKTEDEASAALDF 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRY------SLKKEKEVSEDEKNPVLAAKRGE 114
F+ S +DT RI+ E +GD + P+ WS+Y S KE SE ++ K +
Sbjct: 62 FHNSCIDTARITVERCAGLGDASKPKSWSKYAPDSKSSEAKEAPTSEPAEDGKKKKKSKK 121
Query: 115 KKTIEKVT------------------------ENDDPQLLEFLQVMQPRVKSKMWANDTL 150
K E+V DDP EFL+ + K+W+N+ L
Sbjct: 122 GKEEEEVDDKSGKKNKKDKEKENNKVKELLEKHKDDPLFEEFLE-SHTKGDKKIWSNNAL 180
Query: 151 IG 152
+G
Sbjct: 181 LG 182
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPST-------KTLALVVFLEPVEAAAAFKGL 550
LV+N+P+ ++ E+ ++F FG + V LP + V F EA AFK L
Sbjct: 784 LVRNVPFQANADEVKELFKAFGEIKSVRLPKKMVGEEKHRGFGFVEFYTKKEAKRAFKAL 843
Query: 551 AYKRY-KGVPLYLEWAPSD 568
+ G L LEWA +D
Sbjct: 844 CQSTHLYGRRLVLEWAQTD 862
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL V+NLP TE +L+E FS+ G V++V + +D K + +V Y + AS A++
Sbjct: 3 RLIVKNLPKNVTETKLKELFSEKGIVTDVQLKYTEDRKFRR-FGFVGYKTEDEASAALDF 61
Query: 360 LDNS 363
NS
Sbjct: 62 FHNS 65
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDG--KSRQFAFIGFRTEQEAEEAI 58
++I V+N+P D +++ F GEI +L + G K R F F+ F T++EA+ A
Sbjct: 781 TKILVRNVPFQANADEVKELFKAFGEIKSVRLPKKMVGEEKHRGFGFVEFYTKKEAKRAF 840
Query: 59 KYFNKS-YLDTCRISCEIAR 77
K +S +L R+ E A+
Sbjct: 841 KALCQSTHLYGRRLVLEWAQ 860
>gi|195490760|ref|XP_002093276.1| GE20857 [Drosophila yakuba]
gi|194179377|gb|EDW92988.1| GE20857 [Drosophila yakuba]
Length = 919
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 269/467 (57%), Gaps = 57/467 (12%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
++ ESGR+F RNL YT TE++LR+ F +FG V EV++ +DK T++ KG V Y +PE A
Sbjct: 361 DISESGRIFFRNLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHA 420
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
+A LD + F GRLLH++P++ + + K++L + + + K+ + ++ A + G
Sbjct: 421 LKAFNALDGTDFHGRLLHLLPSKDIEKNPKEDLDENDASLSFKEKKALKLKKNAQKPIG- 479
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE--ANDLAVRIALGETQVIAETKKALTN 471
WN+LF+ + V E +A++ SK +LD + AVR+ALGETQV+ E K+ L
Sbjct: 480 ---WNTLFLGANAVAEILAKQFKTSKERILDTSDGGSSAAVRLALGETQVVIEMKRFLEE 536
Query: 472 AGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT 531
GV + + +E KRSN V L KNLP + EL +F +FG + +++LP +
Sbjct: 537 EGVRLDAFDE------PAKKRSNSVILAKNLPAATEISELTPIFSRFGPIGRIVLPPSGV 590
Query: 532 LALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDA 591
AL+ + +P+EA AFK LAY ++K PLYLEWAP V S++ + D V+ + +
Sbjct: 591 TALIEYCDPLEARQAFKKLAYSKFKNAPLYLEWAPEQVFSKTLSG------DPVIPKSEP 644
Query: 592 KRA----------LLEQQLEGVT---DADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE 638
K +++++ E T DAD +P+ + +LF++NLNFKT E + KHF
Sbjct: 645 KPKEEPKPEEKPIVIDEKAEEDTRAEDADDEPE--PNTTLFLRNLNFKTVQETVEKHF-R 701
Query: 639 HIKEGRILSVKVKKHLKNGKNV----SMGFGFIEFDSVETATNVCRDLQGTILDGHALIL 694
H+ G I +V++ K +N +N S+G+GFI+F A + ++LQ T +DG+ + L
Sbjct: 702 HL--GSIHTVEIAKR-RNPENPREFNSLGYGFIQFKKSSVAEHALKNLQLTHIDGNPVEL 758
Query: 695 QLCHAKKDEQVVKK-----------AEKDKSSTKLLVRNVAFEAQRK 730
K+ ++V+K ++K ++ TK+LVRN+ F+AQ +
Sbjct: 759 -----KRSDRVLKTQDNEGAQRRLASQKKQTGTKILVRNIPFQAQYR 800
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 16/164 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LPK++TED+LR F +G ITD +L T DGK RQF F+G+ TE+EA+ AI++
Sbjct: 2 SRIIVKQLPKHITEDKLRQIFGAQGTITDLQLKYTPDGKFRQFCFVGYSTEEEAQSAIRH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEV-------SEDEKNPVLAAKRG 113
F+ + + T R+ E +G + P+ WS+Y+ +K + E + K+
Sbjct: 62 FDNTCIQTIRVRVESCAALGSEDKPQSWSKYAKDSKKNLDKLKEKEKEAAAKAKESEKKK 121
Query: 114 EKKTIEKVTE-----NDDPQLLEFLQVMQPRVKSK-MWANDTLI 151
+K+ ++KV + DDP+ EFL+ KS+ +W ND I
Sbjct: 122 KKEKVDKVDQILSRHKDDPEFQEFLEAHD---KSRTLWGNDLGI 162
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ V+ LP TED+LR+ F G ++++ + D K + +V Y+ E A AI
Sbjct: 3 RIIVKQLPKHITEDKLRQIFGAQGTITDLQLKYTPDGK-FRQFCFVGYSTEEEAQSAIRH 61
Query: 360 LDNSIFQ 366
DN+ Q
Sbjct: 62 FDNTCIQ 68
>gi|24661759|ref|NP_648337.1| CG3335 [Drosophila melanogaster]
gi|7294907|gb|AAF50237.1| CG3335 [Drosophila melanogaster]
Length = 918
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 165/488 (33%), Positives = 268/488 (54%), Gaps = 64/488 (13%)
Query: 279 VDPGNP----SSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDK 334
VD GN S + ++ ESGR+F RNL YT TE++LR+ F +FG V EV++ +DK
Sbjct: 340 VDAGNAKWKHQQDSLSKEDDISESGRIFFRNLAYTTTEEDLRKLFEQFGPVVEVNLPLDK 399
Query: 335 DTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGT 394
T++ KG V Y +PE A +A LD + F GRLLH++P++ + + K++L + + +
Sbjct: 400 LTRKIKGFGTVTYMMPEHALKAFNTLDGTDFHGRLLHLLPSKDIEKNPKEDLDENDASLS 459
Query: 395 KTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE--ANDLAV 452
K+ + ++ A + G WN+LF+ + V E +A++ SK +LD + AV
Sbjct: 460 FKEKKALKLKKNAQKPIG----WNTLFLGANAVAEILAKQFKTSKERILDTSDGGSSAAV 515
Query: 453 RIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELA 512
R+ALGETQV+ E K+ L GV + + +E KRSN V L KNLP + E+
Sbjct: 516 RLALGETQVVIEMKRFLEEEGVRLDAFDE------PAKKRSNTVILAKNLPAATEISEIT 569
Query: 513 KMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ 572
+F +FG + +++LP + AL+ + +P+EA AFK LAY ++K PLYLEWAP V ++
Sbjct: 570 PIFSRFGPIGRIVLPPSGVTALIEYCDPLEARQAFKKLAYSKFKNAPLYLEWAPEQVFTK 629
Query: 573 SSTS---------------KGNQK---NDAVVGEHDAKRALLEQQLEGVTDADIDPDRVE 614
+ + K +K NDA E D++ DAD +P+
Sbjct: 630 TLSGEPVIPKSEPKPKEEVKPEEKPIVNDAKPDEEDSR----------AEDADDEPE--P 677
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNV-SMGFGFIEFDSVE 673
+ +LF++NLNFKT E + KHF H+ + + ++ +N + S+G+GFI+F
Sbjct: 678 NTTLFLRNLNFKTVQETVEKHF-RHLGSIHTVEIAKRRDPENPREFKSLGYGFIQFKKSS 736
Query: 674 TATNVCRDLQGTILDGHALILQLCHAKKDEQVVKK-----------AEKDKSSTKLLVRN 722
A + ++LQ T +DG+ + L K+ ++V+K ++K ++ TK+LVRN
Sbjct: 737 VAEHALKNLQLTHIDGNPVEL-----KRSDRVLKTQDNDGAQRRLASQKKQTGTKILVRN 791
Query: 723 VAFEAQRK 730
+ F+AQ +
Sbjct: 792 IPFQAQYR 799
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 16/164 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LPK++TED+LR F +G ITD +L T DGK RQF F+G+ TE+EA+ AI++
Sbjct: 2 SRIIVKQLPKHITEDKLRQIFGAQGTITDLQLKYTPDGKFRQFCFVGYSTEEEAQSAIRH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEK---EVSEDEKNPVLAAKRGEKKT 117
F+ + + T R+ E +G + P+ WS+Y+ +K ++ E E+ AK EKK
Sbjct: 62 FDNTCIQTSRVRVESCAALGSEDKPQSWSKYAKDSKKNLDKLKEKEREAAAKAKESEKKK 121
Query: 118 IEKVT---------ENDDPQLLEFLQVMQPRVKSK-MWANDTLI 151
+ DDP+ EFL+ KS+ +W ND I
Sbjct: 122 KKDKVDKVDQILSRHKDDPEFQEFLEAHD---KSRTLWGNDLGI 162
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ V+ LP TED+LR+ F G ++++ + D K + +V Y+ E A AI
Sbjct: 3 RIIVKQLPKHITEDKLRQIFGAQGTITDLQLKYTPDGK-FRQFCFVGYSTEEEAQSAIRH 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDK-QELHNSTSQGTKTLKQRREEER 405
DN+ Q + V S DK Q K L + +E+ER
Sbjct: 62 FDNTCIQTSRVRVESCAALGSEDKPQSWSKYAKDSKKNLDKLKEKER 108
>gi|195133350|ref|XP_002011102.1| GI16192 [Drosophila mojavensis]
gi|193907077|gb|EDW05944.1| GI16192 [Drosophila mojavensis]
Length = 919
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 258/458 (56%), Gaps = 40/458 (8%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++ + ESGR+F RNL YT TE++L++ F FG + EV++ VDK T++ KG V + +PE
Sbjct: 361 EENISESGRIFFRNLAYTTTEEDLQKLFEPFGPLVEVNLPVDKVTRQIKGFGTVTFMMPE 420
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A LD + F GRLLH++P K+ + QE + L ++++ K + +
Sbjct: 421 HALKAFNALDGTDFHGRLLHLLPG--KELDNAQE---TVEDNDPNLSFKQKKALKLKQNA 475
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE--ANDLAVRIALGETQVIAETKKAL 469
WN+LF+ + V E +A++ +SK +LD + AVR+ALGETQ++ E KK L
Sbjct: 476 QKPIGWNTLFLGANAVAEILAKQFKMSKERILDTSEGGSSAAVRLALGETQIVVEMKKFL 535
Query: 470 TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST 529
GV +S+ +E + KRS V L KNLP + +LA +F KFG + +++LP +
Sbjct: 536 EEEGVRLSAFDEPTQ------KRSKTVILAKNLPAATEVADLAPIFSKFGPIGRIVLPPS 589
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS-----QSSTSKGNQKNDA 584
AL+ F +P EA AFK LAY ++K VPLYLEWAP D + ++ K K ++
Sbjct: 590 GVTALIEFCDPSEARQAFKKLAYSKFKNVPLYLEWAPEDTFTKTLNGEAIIPKTEPKPES 649
Query: 585 VVGEHDAKRALLEQQLEG---VTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIK 641
AK LEQ+ + DAD +P+ + ++F++NLNFKT + +++HF + +
Sbjct: 650 EPKMEQAKELELEQKPKPDPVAEDADDEPE--PNTTIFLRNLNFKTVAQTIQEHF-QSLG 706
Query: 642 EGRILSVKVKKHLKNGKNV-SMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
+ + +K +N K + S+G+GFI+F A +D+Q T +DG+ L K
Sbjct: 707 TIHTIEIAKRKDPQNPKQLNSLGYGFIQFKRAAVAAQALKDMQLTKIDGN-----LVELK 761
Query: 701 KDEQVVKK----------AEKDKSSTKLLVRNVAFEAQ 728
+ ++V+K A+K ++ TK+LVRN+ F+A
Sbjct: 762 RSDRVLKTQDDGARRRQVAQKKQTGTKILVRNIPFQAH 799
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 95/167 (56%), Gaps = 12/167 (7%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LPK ++ED+LR+ F KG ITD +L T DGK RQF F+G+ +E EA+ AIK+
Sbjct: 2 SRIIVKQLPKQISEDKLRNIFGTKGTITDLQLKYTPDGKFRQFCFVGYSSEAEAQAAIKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKK-TIE 119
FN + + T R+ E +G P+ WS+Y+ +K + + + + K EKK
Sbjct: 62 FNNTCIQTSRVRVEPCAALGSEEKPQSWSKYAKDSKKNLEKLKAAQPVTKKVNEKKEKTN 121
Query: 120 KVTE-----NDDPQLLEFLQVMQPRVKSK-MWANDTLIGLMADQKAK 160
KV E DDP EF MQ K++ +WAND G++A Q K
Sbjct: 122 KVDEILAKHKDDPAFQEF---MQAHDKTRALWANDA--GIVAAQPDK 163
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 289 KDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHI----VVDKDTKRSKGIAY 344
+ V Q+ ++ VRN+P+ A E+R+ F FG ++ + + +D+ R G +
Sbjct: 777 RQVAQKKQTGTKILVRNIPFQAHHHEVRDIFKAFGELTSLRLPKKMTPGEDSHR--GFCF 834
Query: 345 VLYAIPESASRAIEVLDNSI-FQGRLLHVMPARHKKSSDKQELHNSTS 391
V Y A RA + L S GR L + A ++ D +EL T+
Sbjct: 835 VDYTTKADAKRAFDALSASTHLYGRRLVLEWASNEDQQDVEELRKRTA 882
>gi|193624932|ref|XP_001949363.1| PREDICTED: probable RNA-binding protein 19-like [Acyrthosiphon
pisum]
Length = 831
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/442 (35%), Positives = 253/442 (57%), Gaps = 39/442 (8%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++ + ESGR+FVRNLP+ TE+EL+ F K+G V+EV I +DK +++ KG + Y +PE
Sbjct: 314 EESIAESGRIFVRNLPFITTEEELQTVFEKYGPVTEVIIPIDKISRQVKGYGLITYLMPE 373
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A LD +IF GR++H++P + K + L + T+ + K+++ + SEA
Sbjct: 374 HAVKAYTELDGTIFHGRMMHLLPGKAKIN-----LEDETTDECSSFKKKK-MAKLKSEA- 426
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTN 471
G + WNSLF+ + V + IA+ + +K ++L ++ AVR+ALGE+Q++++TK L N
Sbjct: 427 GLSHNWNSLFLGQNAVADIIAKTYNTTKENVLT--GDNAAVRLALGESQIVSDTKIYLEN 484
Query: 472 AGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT 531
GV + + + RS +V LVKNLP D++E EL +F K+G +++V+LP +
Sbjct: 485 QGVKLDIFNQ------TVINRSKNVILVKNLPADTTELELKDIFSKYGLVNRVVLPPSGV 538
Query: 532 LALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDA 591
L+ F++ EA AF+ LAY ++K +PLYLEWAP VL+ D
Sbjct: 539 TGLIEFVQNSEAKTAFRQLAYSKFKHLPLYLEWAPDKVLT------------------DV 580
Query: 592 KRALLEQQLEGVTDADIDPDRVESRS---LFVKNLNFKTCDENLRKHFGEHIKEGRILSV 648
+ + E+ T+ D + D E S LF+KN+NF T +E++ KHF K +
Sbjct: 581 PQNIHEETFPSYTNKDTEDDIDEPESDTTLFIKNINFNTTEEHITKHFEPCGKIANVTVA 640
Query: 649 KVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKK 708
+ K GK +SMG+GFI+F ++ + Q ++LD H++ L+ + V +
Sbjct: 641 RKKDPNLPGKFLSMGYGFIQFYRQKSVNEALKTKQLSMLDNHSIELKRSNRTLQSATVAE 700
Query: 709 AEKDKS---STKLLVRNVAFEA 727
++ KS STK+LVRN+ F+A
Sbjct: 701 RKQGKSYEESTKILVRNIPFQA 722
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 68/92 (73%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLPK +T+D+LR+ FS+KG ITD +L TK GK R FAF+GF+ E+EA+ A+ Y
Sbjct: 2 SRLIVKNLPKAITDDKLREIFSEKGVITDVQLKYTKAGKFRHFAFVGFQNEEEAKAALDY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
F+ ++L + RI E ++GD N PR WS+Y+
Sbjct: 62 FDNTFLHSLRIKVEKCTELGDDNKPRSWSKYA 93
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 177/429 (41%), Gaps = 59/429 (13%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL V+NLP T+D+LRE FS+ G +++V + K K + A+V + E A A++
Sbjct: 3 RLIVKNLPKAITDDKLREIFSEKGVITDVQLKYTKAGK-FRHFAFVGFQNEEEAKAALDY 61
Query: 360 LDNSIFQGRLLHVMPARHKKSS----DKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
DN+ LH + + +K + D + S T ++ K+ E + T+
Sbjct: 62 FDNT-----FLHSLRIKVEKCTELGDDNKPRSWSKYAPDSTAYKKEHSTPKSEEVTIQTE 116
Query: 416 AWNSLFMRPDTVVENIARKHGVSK--SDLLDREAN-----DLAVRIALGETQVIAETKKA 468
+ + VE ++H ++ L+ DL E+ E +
Sbjct: 117 PKTKKKSKLKSEVEEKLKQHLSDPMFTEFLEAHGQEKILKDLNNEDKTEESSTQKEIDEE 176
Query: 469 LTN--AGVNVSSLE--EFSAGK--------TDGLKRSNHVFLVKNLPYDSSEGELAKMFG 516
TN A N+S E + +GK G+K H +V+ LPY + L + F
Sbjct: 177 PTNKIANANISDFEYLKIKSGKKSEADILDNPGIKTEYHTIVVRGLPYKVKKAMLKEFFK 236
Query: 517 KFGSLDKVILPS-TKTLALVVFLEPVEAAAAF-KGLAYKRYKGVPLYLEWAPSDVLSQSS 574
LD + LP K +A + F +A K ++ K V LY +D L +++
Sbjct: 237 PL-KLDSIRLPPKIKGVAYIGFKNKCDAEQCLIKNKSFLNGKRVLLYPMKNEADDLEENN 295
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRV-ESRSLFVKNLNFKTCDENLR 633
N++N + TD+ I + + ES +FV+NL F T +E L+
Sbjct: 296 NL--NKRN---------------PDWQKQTDSLIHEESIAESGRIFVRNLPFITTEEELQ 338
Query: 634 KHFGEH--IKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHA 691
F ++ + E I K+ + +K G+G I + E A +L GTI G
Sbjct: 339 TVFEKYGPVTEVIIPIDKISRQVK-------GYGLITYLMPEHAVKAYTELDGTIFHGRM 391
Query: 692 LILQLCHAK 700
+ L AK
Sbjct: 392 MHLLPGKAK 400
>gi|195589101|ref|XP_002084294.1| GD14198 [Drosophila simulans]
gi|194196303|gb|EDX09879.1| GD14198 [Drosophila simulans]
Length = 778
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 264/462 (57%), Gaps = 46/462 (9%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
++ ESGR+F RNL YT TE++LR+ F +FG V EV++ +DK T++ KG V Y +PE A
Sbjct: 219 DISESGRIFFRNLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHA 278
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
+A LD + F GRLLH++P++ + + K++L + + + K+ + ++ A + G
Sbjct: 279 LKAFNTLDGTDFHGRLLHLLPSKDIEKNPKEDLDENDASLSFKEKKALKLKKNAQKPIG- 337
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE--ANDLAVRIALGETQVIAETKKALTN 471
WN+LF+ + V E +A++ SK +LD + AVR+ALGETQV+ E K+ L
Sbjct: 338 ---WNTLFLGANAVAEILAKQFKTSKERILDTSDGGSSAAVRLALGETQVVIEMKRFLEE 394
Query: 472 AGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT 531
GV + + +E KRSN V L KNLP + E+ +F +FG + +++LP +
Sbjct: 395 EGVRLDAFDE------PAKKRSNTVILAKNLPAATEISEITPIFSRFGPIGRIVLPPSGV 448
Query: 532 LALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST-------SKGNQKNDA 584
AL+ + +P+EA AFK LAY ++K PLYLEWAP V S++ + S+ K +A
Sbjct: 449 TALIEYCDPLEARQAFKKLAYSKFKNAPLYLEWAPEQVFSKTLSGEPVIPKSEPKPKEEA 508
Query: 585 VVGE----HDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHI 640
E +D K E++ DAD +P+ + +LF++NLNFKT + + KHF H+
Sbjct: 509 KPEEKPIVNDVK---AEEEDSRAEDADDEPE--PNTTLFLRNLNFKTVQKTVEKHF-RHL 562
Query: 641 KEGRILSVKVKKHLKNGKNV-SMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHA 699
+ + ++ +N + S+G+GFI+F A + ++LQ T +DG+ + L
Sbjct: 563 GSIHTVEIAKRRDPENPREFKSLGYGFIQFKKSSVAEHALKNLQLTHIDGNPVEL----- 617
Query: 700 KKDEQVVKK-----------AEKDKSSTKLLVRNVAFEAQRK 730
K+ ++V+K ++K ++ TK+LVRN+ F+AQ +
Sbjct: 618 KRSDRVLKTQDNDGAQRRLASQKKQTGTKILVRNIPFQAQYR 659
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 63/92 (68%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LPK++TED+LR F +G ITD +L T DGK RQF F+G+ TE+EA+ AI++
Sbjct: 2 SRIIVKQLPKHITEDKLRQIFGAQGTITDLQLKYTPDGKFRQFCFVGYSTEEEAQSAIRH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
F+ + + T R+ E +G + P+ WS+Y+
Sbjct: 62 FDNTCIQTSRVRVESCAALGSEDKPQSWSKYA 93
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 120/298 (40%), Gaps = 38/298 (12%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ V+ LP TED+LR+ F G ++++ + D K + +V Y+ E A AI
Sbjct: 3 RIIVKQLPKHITEDKLRQIFGAQGTITDLQLKYTPDGK-FRQFCFVGYSTEEEAQSAIRH 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEE------RKASEASGN 413
DN+ Q + V S DK + + ++ KT Q R + K N
Sbjct: 62 FDNTCIQTSRVRVESCAALGSEDKPQSWSKYAKD-KTQSQGRINQIXELFTIKIHNVPYN 120
Query: 414 TKAWNSL-FMRP--DTVVENIARKHGVSKSDL---LDREANDLAVRIALGETQVI----- 462
TK L F +P V ++ HG D L + + QV
Sbjct: 121 TKRQEVLKFFKPLKPYSVRLPSKVHGFCYVGFKTEKDMAKGMLKNKSFIKGKQVFFSDFT 180
Query: 463 --------AETKKALTNAGVNVSSL----EEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
+++ + L A V+ + ++ S K D + S +F +NL Y ++E +
Sbjct: 181 EKNKVTKASKSGQPLAPAAVDAGNAKWKHQQDSLSKEDDISESGRIFF-RNLAYTTTEED 239
Query: 511 LAKMFGKFGSLDKVILP------STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYL 562
L K+F +FG + +V LP K V ++ P A AF L + G L+L
Sbjct: 240 LRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHALKAFNTLDGTDFHGRLLHL 297
>gi|449666027|ref|XP_002162990.2| PREDICTED: probable RNA-binding protein 19-like [Hydra
magnipapillata]
Length = 914
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 256/449 (57%), Gaps = 55/449 (12%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+++ ++GRLFVRNL YT TED L FS+FG + E+++ +DK++ ++ G A+V + + +
Sbjct: 402 EDISDTGRLFVRNLSYTCTEDSLTNLFSQFGPLVEINLPIDKNSNKTTGFAFVTFMMADH 461
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG 412
A +A+ LD SIF+GR+LH++P + KK ++ +S + K ++E ++K
Sbjct: 462 AIKAMSKLDGSIFEGRILHILPGKSKKVKEEDNTQSS------SYKVKQEAKKKL----- 510
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE-ANDLAVRIALGETQVIAETKKALTN 471
T WN+LF+ + VV+ +A + SK D+LD E ++ LAVR+ALGET++++ET++ L +
Sbjct: 511 QTHNWNALFLGQNAVVDVMANRLNKSKHDILDTESSSSLAVRMALGETELVSETREFLES 570
Query: 472 AGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT 531
GV + G+ + L RS V LVKNLP + EL ++F K+G L ++++P
Sbjct: 571 EGVKLDCF-----GQANSL-RSKTVILVKNLPPQTLTSELREIFSKYGDLGRLLMPPFGI 624
Query: 532 LALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDA 591
A+V F++ +A AF LAY ++K PLYLEWAP DVLS +K + V E +
Sbjct: 625 TAIVEFIQSKDAKNAFNNLAYSKFKHTPLYLEWAPLDVLSGEVKKVVEKKVEDVESEDE- 683
Query: 592 KRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVK 651
+ DA LFVKNLNF T +E ++ F G I +V +
Sbjct: 684 -----------INDAQA--------VLFVKNLNFNTVEERFKEFFSSC---GEIKTVTIA 721
Query: 652 KHLKNGKN----VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVK 707
K ++ KN +SMG+GFIE+ +E+ + LQ LDGH L L+ H E ++
Sbjct: 722 KK-QDPKNPSAMLSMGYGFIEYKKIESVEKALKLLQHCELDGHKLELKKSHR---ESILP 777
Query: 708 KA------EKDKSSTKLLVRNVAFEAQRK 730
K EK++ S+K++VRN+ FEA K
Sbjct: 778 KVSRKRANEKNQVSSKMVVRNIPFEATVK 806
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 193/417 (46%), Gaps = 82/417 (19%)
Query: 1 SRICVKNLPKYVTEDRLRDFF-SQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SR+ VKNLPK V ++ +++ F SQ GEITD KL TK+G R+FAF+G++T+ EA A+K
Sbjct: 2 SRLIVKNLPKDVKKESVKELFESQGGEITDLKLCFTKEGIFRKFAFVGYKTDTEALAALK 61
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYS------LKKEKEVSEDEKNPVLAAKRG 113
+ N +++ T +I EI + +GDP++PRPWS+YS +K E+ E+ KN + + G
Sbjct: 62 FLNNTFMGTSKIHLEICKDLGDPSVPRPWSKYSKGSSSFSRKAHEI-EERKNYIKELQFG 120
Query: 114 E------KKTIEKVTEN------DDPQLLEFLQVMQPRVKSKMWANDTL---------IG 152
+ KK +++ ++N ++ + +F+ V + + W ND++ I
Sbjct: 121 KSNDSKIKKELKEKSKNEFKDLENNSEFEDFVGVHLNKGIKQSWTNDSINYIKTKTEKIS 180
Query: 153 LMADQKAKVSENI----------SQAIKGGE----KSITLHVKSDKSNVITDSQATEKSK 198
+K+ V ENI ++A K E K K + + +I + E
Sbjct: 181 KRKKEKSDVKENINVKFNDEDNETEAEKLNEEWNKKEAVTSCKVETACIIEQNNKNENV- 239
Query: 199 NAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECD 258
A + SD+++ K + + +S D+ + D D +++E ND
Sbjct: 240 -AKIKDQTSDLEWLKLKTLQSKGESTESDEKTEEAADRDLNSDDKENSND---------- 288
Query: 259 SIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREH 318
+ + G S +D++ ++ +R +P+ +E E+ E
Sbjct: 289 -------------------LQENGMKKSFDQDIKSMTVK-----MRGIPFKCSEKEVIEF 324
Query: 319 FSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA 375
F + ++ +KD K S G A+V + E A++ D QGR + + P
Sbjct: 325 FKPLI-IDDIRFPKNKDGKSS-GYAFVDFKTIEDVKSALKK-DKQKIQGRYIELFPV 378
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
P S K ++ S ++ VRN+P+ AT EL+E FS FG++ + + K T +G A
Sbjct: 777 PKVSRKRANEKNQVSSKMVVRNIPFEATVKELQELFSTFGHIKSLRL-PKKITGTHRGFA 835
Query: 344 YVLYAIPESASRAIEVLDNSI-FQGRLL 370
++ + + A RA + L S GR L
Sbjct: 836 FIDFTTKQDAKRAFKALCQSTHLYGRRL 863
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S++ V+N+P T L++ FS G I +L + G R FAFI F T+Q+A+ A K
Sbjct: 792 SKMVVRNIPFEATVKELQELFSTFGHIKSLRLPKKITGTHRGFAFIDFTTKQDAKRAFKA 851
Query: 61 FNKS-YLDTCRISCEIA 76
+S +L R+ E A
Sbjct: 852 LCQSTHLYGRRLVLEWA 868
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-----LALVVFLEPVEAAAAFKGLAY 552
+V+N+P++++ EL ++F FG + + LP T A + F +A AFK L
Sbjct: 795 VVRNIPFEATVKELQELFSTFGHIKSLRLPKKITGTHRGFAFIDFTTKQDAKRAFKALCQ 854
Query: 553 KRY-KGVPLYLEWAPSD 568
+ G L LEWA D
Sbjct: 855 STHLYGRRLVLEWADDD 871
>gi|17542530|ref|NP_502432.1| Protein RBD-1 [Caenorhabditis elegans]
gi|3880097|emb|CAB05631.1| Protein RBD-1 [Caenorhabditis elegans]
Length = 872
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 178/524 (33%), Positives = 276/524 (52%), Gaps = 83/524 (15%)
Query: 277 EIVDPGNPSSSSKD-----VQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
E+++ S S+D V++++LE+GRLF+RNLPY ED+L+ F K+G VSEV +V
Sbjct: 252 EVIEEHGASLESRDKEEETVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVV 311
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQE------ 385
+DK T KG A V + PE+A A LD +F+GR++H++P K++ + +E
Sbjct: 312 IDKKTGACKGFAIVEFVFPEAAVAAYSALDGYVFKGRMMHILPGDEKRTKEGEEESEVVP 371
Query: 386 -------LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVS 438
+ + K + ++E+K + A +WN+LF+ + + + +A++ V
Sbjct: 372 DDPDNPLKAEAKKEKKKKSFKEEKDEQKKASAGKTAHSWNALFLGANAIADTLAQRLNVK 431
Query: 439 KSDLLDREANDLA-VRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVF 497
KSDLL + + A VR+AL ET+++ ET+ GV L+ FS KRS+ V
Sbjct: 432 KSDLLTSDQGESAGVRLALAETRLVRETRDFFLENGVK---LDAFS---KPAEKRSDTVM 485
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL-ALVVFLEPVEAAAAFKGLAYKRYK 556
L KNLP EL +MF KFG KV++P+ + ALV+ PV+A AF+ LAY R++
Sbjct: 486 LAKNLPAGVESEELQRMFEKFGDCTKVLMPTEGGVSALVIMGNPVDAKKAFRALAYSRFR 545
Query: 557 GVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGE----------HDAKRALLEQQLEGVTDA 606
PLYLEWAP DV+ +T+ + A V + ++ KR + + +G+T+
Sbjct: 546 SQPLYLEWAPYDVM--GATAPPAEDKTAEVADKPKLSKREMTYEEKRKERKNRQQGITEE 603
Query: 607 DID---------------------------PDRVESRS-LFVKNLNFKTCDENL----RK 634
+ D +ES S LFVKNL F T D +L RK
Sbjct: 604 EKDDGEVIEEEEKPKEVEAEDKKKSSKKQSEKEIESGSTLFVKNLAFDTTDGSLEFLFRK 663
Query: 635 HFGEHIKEGRILSVKVKKHLKNG---KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHA 691
+G+ +K S ++ K L K +SMGFGF++F + A +D+QG +LDGH+
Sbjct: 664 RYGDLVK-----SAQISKKLNPAEPTKPLSMGFGFVQFYTAFDAKTALKDMQGELLDGHS 718
Query: 692 LILQLCHAKK-DEQVVKKAE----KDKSSTKLLVRNVAFEAQRK 730
L L++ H + D+ +K+ E + TKLLVRN+ FEA K
Sbjct: 719 LELKISHRENADKGALKRKEVKQKEQGECTKLLVRNLPFEASVK 762
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 7/139 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ VKNLP TE +LR FF + G+I+DA L TK+GK R FAF+GF E A A+
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAK 62
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRY----SLKKEKEVSEDEKNPVLAAKRGEKK 116
N+++ ++ +++ E R GD N PR WS+Y S K ++E NP K E +
Sbjct: 63 SNQTFFNSKKLTVEECRPFGDANKPRAWSKYAKDSSAYKRTHGEKEEANP---GKSDETE 119
Query: 117 TIEKVTENDDPQLLEFLQV 135
+ DD + +FL+
Sbjct: 120 EPAPKKQKDDAKFDQFLEA 138
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL V+NLP T TE +LR+ F K+G +S+ + K+ K +G A+V + SAS A+
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGK-FRGFAFVGFLDEGSASNALAK 62
Query: 360 LDNSIFQGRLLHVMPAR 376
+ + F + L V R
Sbjct: 63 SNQTFFNSKKLTVEECR 79
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPST-------KTLALVVFLEPVEAAAAFKG 549
LV+NLP+++S E+ +F FG++ + +P + V F+ EA AF
Sbjct: 750 LLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRAFDS 809
Query: 550 LAYKRY-KGVPLYLEWAPSDVLSQSSTSKGNQK---NDAVVGEHDAKRALLEQQLEGVTD 605
L + + G L LEWA D + K +K N V + A+ +QQL+ D
Sbjct: 810 LVHSTHLYGRRLVLEWAKDDETVEELREKTAEKFAGNKKGVKKSKAQTEEFQQQLQIADD 869
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS-KGIAYVLYAIP 350
Q+E E +L VRNLP+ A+ E+ F FG V + I K+ +G +V +
Sbjct: 741 QKEQGECTKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISA 800
Query: 351 ESASRAIEVLDNSI-FQGRLL 370
+ A RA + L +S GR L
Sbjct: 801 DEAHRAFDSLVHSTHLYGRRL 821
>gi|300120416|emb|CBK19970.2| unnamed protein product [Blastocystis hominis]
Length = 639
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 164/477 (34%), Positives = 258/477 (54%), Gaps = 54/477 (11%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
++++E GRLF++N+PY+ E+ELRE S++G + +V I ++ + SKG A+V + PE
Sbjct: 101 EDIIEEGRLFLQNIPYSCKEEELREFISQYGEIVDVFIPLNS-KRESKGYAFVTFMFPEQ 159
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG 412
A AIE LD S+FQGR+L V A KK S H T +G K L +R EE
Sbjct: 160 AIAAIEKLDGSVFQGRVLRVNVANVKKESCIVR-HAHTYKGEKYLARRLEE-------VN 211
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNA 472
NT +WN+L++ DTV++ I+ K GV SD+LD E+ ++AVR+AL ET+V+ +TKK L +
Sbjct: 212 NTASWNALYLNNDTVMKVISEKLGVKTSDILDVESGNMAVRVALAETEVLEDTKKWLESQ 271
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL 532
V + LE + G + ++RS+ + LVKNLPY + EL +F ++G + +++LP + +
Sbjct: 272 NVQIEVLEAVARG--EPVQRSDKIILVKNLPYTADRDELLSLFSQYGEVQQLVLPESHVM 329
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDV----------------------- 569
ALV F P EA AF L+Y++Y+ PLYLE+ P +
Sbjct: 330 ALVTFSVPSEAKRAFNRLSYRKYQHTPLYLEYLPIAIGQQRRSQAAADSKNDNASKSMAA 389
Query: 570 LSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVE-----------SRSL 618
S+ ++ N ND A LE + + +P + + + ++
Sbjct: 390 PSKQPSADDNNGNDKEANSASQSSAFASNTLESSSSSS-NPSKRDHAEEAGGEDSSNTTI 448
Query: 619 FVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNV 678
++KNLN+KT + +RK F + + +++ KK +G+++ MGFGF +++ A
Sbjct: 449 YIKNLNWKTTEAAVRKLFN-SVPGLKSITLP-KKKTPSGESLPMGFGFAVYETRAQALRA 506
Query: 679 CRDLQGTILDGHALIL------QLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQR 729
L G LDGH L L ++ KK + + E + TKLLVRNV FEA R
Sbjct: 507 LNQLSGKALDGHVLDLSFSARSEIVTTKKRKLTARAEEDGEKRTKLLVRNVPFEASR 563
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 488 DGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVE 542
DG KR+ LV+N+P+++S EL ++FG FG L + P +++ A V ++ +
Sbjct: 545 DGEKRTK--LLVRNVPFEASRSELRELFGSFGQLKSLRQPKKFDGTSRGFAFVEYVSSDD 602
Query: 543 AAAAFKGLAYKRYKGVPLYLEWA 565
A A K LA G L +E+A
Sbjct: 603 AKTAIKALASTHLLGRKLVVEYA 625
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Query: 609 DPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIE 668
D D +E LF++N+ + +E LR+ ++ G I+ V + N K S G+ F+
Sbjct: 100 DEDIIEEGRLFLQNIPYSCKEEELREFISQY---GEIVDVFIP---LNSKRESKGYAFVT 153
Query: 669 FDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVR 721
F E A L G++ G L + + + KK+ +V+ A K L R
Sbjct: 154 FMFPEQAIAAIEKLDGSVFQGRVLRVNVANVKKESCIVRHAHTYKGEKYLARR 206
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 43/231 (18%)
Query: 484 AGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT---------LAL 534
A + G SN +KNL + ++E + K+F L + LP KT
Sbjct: 435 AEEAGGEDSSNTTIYIKNLNWKTTEAAVRKLFNSVPGLKSITLPKKKTPSGESLPMGFGF 494
Query: 535 VVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRA 594
V+ +A A L+ K G L L ++ S+ T+K KR
Sbjct: 495 AVYETRAQALRALNQLSGKALDGHVLDLSFSAR---SEIVTTK--------------KRK 537
Query: 595 LLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL 654
L A + D + L V+N+ F+ LR+ FG G++ S++ K
Sbjct: 538 LT---------ARAEEDGEKRTKLLVRNVPFEASRSELRELFGSF---GQLKSLRQPKKF 585
Query: 655 KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQV 705
S GF F+E+ S + A + L T L G L+++ +AK++ V
Sbjct: 586 ---DGTSRGFAFVEYVSSDDAKTAIKALASTHLLGRKLVVE--YAKEEANV 631
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L VRN+P+ A+ ELRE F FG + + D S+G A+V Y + A AI+
Sbjct: 551 KLLVRNVPFEASRSELRELFGSFGQLKSLRQPKKFDGT-SRGFAFVEYVSSDDAKTAIKA 609
Query: 360 LDNSIFQGRLLHVMPAR 376
L ++ GR L V A+
Sbjct: 610 LASTHLLGRKLVVEYAK 626
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 45/83 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+P + LR+ F G++ + + DG SR FAF+ + + +A+ AIK
Sbjct: 550 TKLLVRNVPFEASRSELRELFGSFGQLKSLRQPKKFDGTSRGFAFVEYVSSDDAKTAIKA 609
Query: 61 FNKSYLDTCRISCEIARKVGDPN 83
++L ++ E A++ + N
Sbjct: 610 LASTHLLGRKLVVEYAKEEANVN 632
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
R+ ++N+P E+ LR+F SQ GEI D + +S+ +AF+ F ++A AI+
Sbjct: 108 RLFLQNIPYSCKEEELREFISQYGEIVDVFIPLNSKRESKGYAFVTFMFPEQAIAAIEKL 167
Query: 62 NKSYLDTCRISCEIA 76
+ S + +A
Sbjct: 168 DGSVFQGRVLRVNVA 182
>gi|440636620|gb|ELR06539.1| hypothetical protein GMDG_02173 [Geomyces destructans 20631-21]
Length = 841
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 180/488 (36%), Positives = 266/488 (54%), Gaps = 50/488 (10%)
Query: 255 EECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDE 314
E+ D +I DSI + + G+ + ++ D + ESGRLFVRNLPYTATEDE
Sbjct: 284 EDVDKLISDSI----------AVVPEVGSSTDATMDA---IRESGRLFVRNLPYTATEDE 330
Query: 315 LREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMP 374
LR HF K+G + E+H+ +D + SKG V Y +A+ A +D FQGRLLH++P
Sbjct: 331 LRVHFEKYGALEEIHLPLDA-SGTSKGFVLVQYEDHAAAAEAFHNVDGEPFQGRLLHILP 389
Query: 375 ARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARK 434
A K+ E + LK++R ++KA EA+ + WNSL+M D V + A +
Sbjct: 390 AAAKRDKKLDEFEIAKL----PLKKQRLIKKKA-EATSSAFNWNSLYMNQDAVNSSTADR 444
Query: 435 HGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSN 494
GVSKS+LLD + D V+ A+ ET VI ETK N V++++ ++ G T
Sbjct: 445 LGVSKSELLDPTSADAGVKQAIAETSVIQETKAYFANNNVDLNAFKKRERGDT------- 497
Query: 495 HVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKR 554
LVKN Y +S E+ KMF +FGS+ +V++P + T+A+V F + +A AAF LAY+R
Sbjct: 498 -TILVKNFTYGTSIDEIRKMFEEFGSVIRVLMPPSGTIAIVEFAQAPQARAAFASLAYRR 556
Query: 555 YKGVPLYLEWAPSDVLSQSSTSK-GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRV 613
K +YLE AP D+ +Q + + N NDA DAK ++ L G A D
Sbjct: 557 MKDSVIYLEKAPKDLFTQPANVEIKNVTNDAKSTSIDAKLSV--SDLLGPESAQTGAD-- 612
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFD 670
+ +LFV+NL+F T + L + F +G +S +V K G+ +SMGFGF+EF
Sbjct: 613 -TSTLFVRNLSFNTTSDRLTETFKPL--DG-FMSARVNTKTDPKKPGQVLSMGFGFLEFR 668
Query: 671 SVETATNVCRDLQGTILDGHALILQLCH--------AKKDEQVVKKAEKDKSSTKLLVRN 722
S A + + G LDGH L ++ H +K+++ K A K TK++V+N
Sbjct: 669 SKAQAQAALKVMDGHSLDGHNLTIKASHRGVDAAEERRKEDRAKKLAGK---RTKIIVKN 725
Query: 723 VAFEAQRK 730
+ FEA +K
Sbjct: 726 LPFEASKK 733
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 25/159 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI +K LP ++E+ R+ FS K ITDAKL+ R+ ++G++T ++A++A+KY
Sbjct: 4 SRIFIKGLPPTISEEEFREHFSSKQPITDAKLI-----PHRRIGYVGYKTPEDAQKAVKY 58
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKN------------PVL 108
FNKS++ +I E+AR + D +P P + + E++ ++ + P L
Sbjct: 59 FNKSFIRMSKIGVEMARAISDTTLP-PSRKVQRETERQGQQERQERAAAKAAAIADIPSL 117
Query: 109 AAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWAN 147
KR E + DP+L EFL+VMQP KSK W +
Sbjct: 118 KRKRAE-------ADAADPKLQEFLEVMQPGSKSKAWTS 149
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+F++ LP T +E+E REHFS +++ ++ + I YV Y PE A +
Sbjct: 1 MESSRIFIKGLPPTISEEEFREHFSSKQPITDAKLIPHRR------IGYVGYKTPEDAQK 54
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
A++ + S + + V AR
Sbjct: 55 AVKYFNKSFIRMSKIGVEMAR 75
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I VKNLP ++ +R F G++ ++ + D +R FAF F T +EAE AI+
Sbjct: 719 TKIIVKNLPFEASKKDIRTLFGTYGQLRSVRVPKKFDNTARGFAFAEFVTAREAENAIEA 778
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ E A
Sbjct: 779 LKDTHLLGRRLVIEFA 794
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ VKNL F+ +++R FG + G++ SV+V K N + GF F EF + A N
Sbjct: 721 IIVKNLPFEASKKDIRTLFGTY---GQLRSVRVPKKF---DNTARGFAFAEFVTAREAEN 774
Query: 678 VCRDLQGTILDGHALILQLC 697
L+ T L G L+++
Sbjct: 775 AIEALKDTHLLGRRLVIEFA 794
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
+VKNLP+++S+ ++ +FG +G L V +P + + A F+ EA A + L
Sbjct: 721 IIVKNLPFEASKKDIRTLFGTYGQLRSVRVPKKFDNTARGFAFAEFVTAREAENAIEALK 780
Query: 552 YKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEG 602
G L +E+A D + + QK VG+ +K AL Q L G
Sbjct: 781 DTHLLGRRLVIEFAAEDAVDAEEEIEKMQKK---VGKQVSKVAL--QNLTG 826
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ V+NLP+ A++ ++R F +G + V + D ++G A+ + A AIE
Sbjct: 720 KIIVKNLPFEASKKDIRTLFGTYGQLRSVRVPKKFDNT-ARGFAFAEFVTAREAENAIEA 778
Query: 360 LDNSIFQGRLLHV 372
L ++ GR L +
Sbjct: 779 LKDTHLLGRRLVI 791
>gi|195396387|ref|XP_002056813.1| GJ16680 [Drosophila virilis]
gi|194146580|gb|EDW62299.1| GJ16680 [Drosophila virilis]
Length = 915
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 157/463 (33%), Positives = 253/463 (54%), Gaps = 45/463 (9%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++ + +SGR+F RNL YT TE+EL++ F FG V EV++ VDK T++ KG V + +PE
Sbjct: 357 EENISDSGRIFFRNLAYTTTEEELQQLFEPFGPVVEVNLPVDKVTRQIKGFGTVTFMMPE 416
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARH---KKSSDKQELHNSTSQGTKTLKQRREEERKAS 408
A +A LD + F GRLLH++P + +EL + S K + ++ +K
Sbjct: 417 HALKAFNALDGTTFHGRLLHLLPGKELDKPAEETNEELESGLSFKQKKALKLKQNAQKPI 476
Query: 409 EASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE--ANDLAVRIALGETQVIAETK 466
WN+LFM + V E +A++ SK+ +LD + + AVR+ALGETQ++ E K
Sbjct: 477 -------GWNTLFMGANAVAELLAKQFKTSKAHILDTDEGGSSAAVRLALGETQIVIEMK 529
Query: 467 KALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVIL 526
K L GV +S+ +E KRS V LVKNLP + +LA +F KFG + +++L
Sbjct: 530 KFLEEEGVRLSAFDE------PAQKRSKTVLLVKNLPAGTEATDLASIFSKFGPIGRIVL 583
Query: 527 PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKG------NQ 580
P + AL+ + EP EA AFK LAY ++K VPLYLEWAP + +++ + +
Sbjct: 584 PPSGVTALIEYCEPSEARQAFKKLAYSKFKNVPLYLEWAPENTFTKTLSGEAIIPKTEPA 643
Query: 581 KNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHI 640
E + ++E D D + + ++F++NLNFKT E + +HF +
Sbjct: 644 VEKEEEEEEKPELKIVEPLKTDAVAEDADDEPEPNTTIFLRNLNFKTVQETVLEHFRQL- 702
Query: 641 KEGRILSVKV--KKHLKNGKNV-SMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
G + +V++ +K +N + + S+G+GFI+F A +D+Q T +DG+ L
Sbjct: 703 --GTVHTVEIAKRKDPQNPRQLNSLGYGFIQFKKASVAAQALKDMQLTQIDGN-----LV 755
Query: 698 HAKKDEQVVKK----------AEKDKSSTKLLVRNVAFEAQRK 730
K+ ++V+K A+K ++ TK+LVRN+ F+A +
Sbjct: 756 ELKRSDRVLKTQDDGARRRQVAQKKQTGTKILVRNIPFQAHYR 798
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 95/168 (56%), Gaps = 14/168 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LPK ++ED+LR+ F KG ITD +L T DGK RQF F+G+ +E EA+ AIK+
Sbjct: 2 SRIIVKQLPKQISEDKLRNIFGTKGTITDLQLKYTPDGKFRQFCFVGYSSEAEAQAAIKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRY---SLKKEKEVSEDEKNPVLAAKRGEKKT 117
FN + + T R+ E +G P+ WS+Y S K + ++ ++ A ++ KK
Sbjct: 62 FNNTCIQTSRVRVEPCAALGSEEKPQSWSKYAKDSKKNQDKLRAEQPASETADQKKAKKK 121
Query: 118 IEKVTE-----NDDPQLLEFLQVMQPRVKSK-MWANDTLIGLMADQKA 159
KV E DDP+ EFLQ K++ +WAND GL Q A
Sbjct: 122 PNKVDEILGKHKDDPEFQEFLQAHD---KTRTLWANDA--GLAGAQSA 164
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ V+ LP +ED+LR F G ++++ + D K + +V Y+ A AI+
Sbjct: 3 RIIVKQLPKQISEDKLRNIFGTKGTITDLQLKYTPDGK-FRQFCFVGYSSEAEAQAAIKH 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
+N+ Q + V P S +K + + ++ +K + + E+ ASE +
Sbjct: 62 FNNTCIQTSRVRVEPCAALGSEEKPQSWSKYAKDSKKNQDKLRAEQPASETA 113
>gi|171695432|ref|XP_001912640.1| hypothetical protein [Podospora anserina S mat+]
gi|170947958|emb|CAP60122.1| unnamed protein product [Podospora anserina S mat+]
Length = 901
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 231/766 (30%), Positives = 356/766 (46%), Gaps = 103/766 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI VKNLP ++E R FS +G E+TD KL+ +R+ F+G+++ ++A +A+K
Sbjct: 4 SRIFVKNLPPSISEADFRKHFSLQGREVTDVKLI-----PNRRIGFVGYKSHEDAIKAVK 58
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIE 119
YFNKS++ S A V P+ + +K + E SED+ + KK
Sbjct: 59 YFNKSFIPAIPRSATQAAHV--PSRDAAKASSLVKSDAEPSEDDPS--------SKKRKR 108
Query: 120 KVTENDDPQLLEFLQVM-QPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITL 178
V + DP+L EFL+VM P K+K + +G A + S I+GGE
Sbjct: 109 DVVDEADPKLQEFLEVMGHPTKKAK---DGEALGSGAFESEAADAIPSALIEGGE----- 160
Query: 179 HVKSD---KSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDD 235
SD + + + E++ +A + D+ E +
Sbjct: 161 ---SDDEYEDIPVRPKRPIEEAPTSALPVATPVAAIIPPAPSQPAGDAAREVPQVSAEAT 217
Query: 236 DDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEV 295
DDD +N D + D A P + ++ Q+
Sbjct: 218 DDDWLRSR---------TNRLLDLVDPDDPGFPAQSAGAMPATTQTPLPEAQVQETQEPG 268
Query: 296 LESG--RLFVRNLPYTATEDELREHFSKFGNVSEVHI-------------------VVDK 334
L +G RLF+RNL YT TED +R+HFS+FG + E H+ +V
Sbjct: 269 LAAGSARLFLRNLSYTVTEDNVRDHFSQFGELEE-HMMRTWARYFSRCFEILKKGPIVVL 327
Query: 335 DTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGT 394
+ KG A + YA PE+A A + D ++FQGR++H++PA K+ + E S
Sbjct: 328 LFRLYKGFAMIRYASPEAALSAFQT-DGTVFQGRIIHILPAAAKRENKLDEYAISKLPLK 386
Query: 395 KTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRI 454
K + +K +EA+ +T WNSLFM D V +A + GVSK +LLD AV+
Sbjct: 387 KQ-----QLLKKKAEAASSTFNWNSLFMSQDAVNTAVAERLGVSKHELLDPTDASAAVKQ 441
Query: 455 ALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKM 514
A+ ET VI E K GVN+ + + G T LVKN+ + E E+ +
Sbjct: 442 AIAETTVIQEAKAYFATHGVNIEAFKSQQRGDTS--------ILVKNIKNATIE-EIRTL 492
Query: 515 FGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
F + GS+ +V++P++ T+A+V F +P AAF AY R+K LYLE P + +
Sbjct: 493 FEEHGSVLRVLMPTSGTIAIVQFAQPAHCRAAFAKKAYSRFKDGVLYLEKGPKGLFVDNL 552
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRK 634
Q D G + L ++ +G D+ E+ SLFV+NLNF T E L
Sbjct: 553 A----QPADRPAGVQKVSASYLLERDDGE-------DQPETASLFVRNLNFSTTTEGLTN 601
Query: 635 HFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHA 691
F +G +S +VK K G+ +SMGFGF F + E A + + G +LDGH
Sbjct: 602 AFKP--LDG-FVSAQVKTKTDPKKPGQVLSMGFGFCAFRTKEQAQAARKAMDGHVLDGHK 658
Query: 692 LILQLCH-------AKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
L+++ H ++ E + KKA + TK++++N+ FEA +K
Sbjct: 659 LLVKASHRGLDAAEERRREDLAKKANAQR--TKVVIKNLPFEASKK 702
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGN-VSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ES R+FV+NLP + +E + R+HFS G V++V ++ ++ I +V Y E A
Sbjct: 1 MESSRIFVKNLPPSISEADFRKHFSLQGREVTDVKLIPNRR------IGFVGYKSHEDAI 54
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSD 382
+A++ + S A H S D
Sbjct: 55 KAVKYFNKSFIPAIPRSATQAAHVPSRD 82
>gi|14488165|emb|CAC42098.1| RBD protein [Chironomus tentans]
Length = 849
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 160/447 (35%), Positives = 251/447 (56%), Gaps = 35/447 (7%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ ESG+LF RNLPYT TED+++ F K+GNV EV++ +D T++ KG V + +PE
Sbjct: 310 EEDICESGKLFFRNLPYTVTEDDVQTVFEKYGNVVEVNVPIDPTTRKIKGFGTVTFLMPE 369
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
+A +A L+ ++F GR+ H++P KS+DK E S + K +RR+E +K + ++
Sbjct: 370 NAVQAYNELNGTMFHGRMFHLLPG---KSNDKTEADESDPKNFKD--KRRKELKKTASSA 424
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE--ANDLAVRIALGETQVIAETKKAL 469
N WN+LFM + V E I++ +G SK ++L+ + AVR+ALGETQ + + K L
Sbjct: 425 HN---WNTLFMGTNAVAEIISKVYGKSKEEVLESSTGGSGAAVRLALGETQAVLDMKTFL 481
Query: 470 TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST 529
GV + S ++ +KRS + LVKNLP ++ E+ F +FG LDKV+LP
Sbjct: 482 EKHGVRLESFDD------QKVKRSKTIILVKNLPANTDVEEMKSKFEQFGVLDKVVLPPN 535
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH 589
L+ F +P EA AFK LAY ++K VPLYLEWAP +V N+A E
Sbjct: 536 SVTCLIKFADPSEARKAFKKLAYSKFKHVPLYLEWAPENVFRDKDEDIEENVNEA--KEE 593
Query: 590 DAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVK 649
A+ ++ E V D+ +P+ +LF+KNLN T +E +R+ F ++I R + +
Sbjct: 594 SAQNEDKNKEEEEVDDSAPEPN----TTLFIKNLNKDTVEETIREIF-KNIGTIRSIQIA 648
Query: 650 VKKHLKNGKN-VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL--------CHAK 700
KK + K + +G+GFI+F A + +Q +DG + L+ H
Sbjct: 649 KKKSTDDEKKLIPLGYGFIQFKQASAADKALKTMQHKEIDGIKIELKRSDRTLNTPAHVS 708
Query: 701 KDEQVVKKAEKDKSSTKLLVRNVAFEA 727
+ + KK E STK++VRN+ F+A
Sbjct: 709 RKKTDNKKQE---GSTKIMVRNIPFQA 732
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 94/165 (56%), Gaps = 12/165 (7%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLPK V E +LR F QKG +TD +L + KDGK RQF FIG+ E A+EA+ Y
Sbjct: 2 SRLIVKNLPKVVNEQKLRKLFEQKGPVTDVQL-KYKDGKFRQFGFIGYENEGSAQEAVNY 60
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS------LKKEKEVSEDEKNPVLAAKRGE 114
FN ++ T +I E+ +GD + P+ WS+Y+ +KK ++ + EK+ V K
Sbjct: 61 FNDTFFGTSKIKVEVCAALGDESKPKSWSKYAKDSEAFIKKNEKSKQPEKDEVEDEKSKI 120
Query: 115 KKTIEKVTE-NDDPQLLEFLQVMQPRVKSKM-WANDTLIGLMADQ 157
KK + E +DP+ EF M+ K K+ W ND G DQ
Sbjct: 121 KKIDAIINEYKEDPEFQEF---MKSHAKDKLIWENDVNTGTKVDQ 162
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 127/305 (41%), Gaps = 43/305 (14%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP +E++ F +FG + +V + + T + +A P A +A + L
Sbjct: 503 ILVKNLPANTDVEEMKSKFEQFGVLDKVVLPPNSVT------CLIKFADPSEARKAFKKL 556
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQE-LHNSTSQGTKTLKQRREEERKASEASGNTKAWNS 419
S F+ L++ A DK E + + ++ + Q ++ ++ E + N+
Sbjct: 557 AYSKFKHVPLYLEWAPENVFRDKDEDIEENVNEAKEESAQNEDKNKEEEEVDDSAPEPNT 616
Query: 420 -LFMR---PDTVVENI---------ARKHGVSKSDLLDREANDLAVRIALGETQVIAETK 466
LF++ DTV E I R ++K D E + + + + +
Sbjct: 617 TLFIKNLNKDTVEETIREIFKNIGTIRSIQIAKKKSTDDEKKLIPLGYGFIQFKQASAAD 676
Query: 467 KALTNA------GVNV---------SSLEEFSAGKTDGLKRSNHV-FLVKNLPYDSSEGE 510
KAL G+ + ++ S KTD K+ +V+N+P+ ++ E
Sbjct: 677 KALKTMQHKEIDGIKIELKRSDRTLNTPAHVSRKKTDNKKQEGSTKIMVRNIPFQANANE 736
Query: 511 LAKMFGKFGSLDKVILPST------KTLALVVFLEPVEAAAAFKGLAYKRY-KGVPLYLE 563
+ ++F FG L V LP + + F+ +A +AF L + + G L LE
Sbjct: 737 IRQLFQVFGELKAVRLPKKPGIDQHRGFGFIDFVTKSDAKSAFDALHHSTHLYGRRLVLE 796
Query: 564 WAPSD 568
WA ++
Sbjct: 797 WAATE 801
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++ VRN+P+ A +E+R+ F FG + V + + +G ++ + A A
Sbjct: 720 STKIMVRNIPFQANANEIRQLFQVFGELKAVRLPKKPGIDQHRGFGFIDFVTKSDAKSAF 779
Query: 358 EVLDNSI-FQGRLL 370
+ L +S GR L
Sbjct: 780 DALHHSTHLYGRRL 793
>gi|194868033|ref|XP_001972201.1| GG15393 [Drosophila erecta]
gi|190653984|gb|EDV51227.1| GG15393 [Drosophila erecta]
Length = 917
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 156/464 (33%), Positives = 261/464 (56%), Gaps = 51/464 (10%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
++ ESGR+F RNL YT E+ELR+ F +FG V EV++ +DK T++ KG V Y +PE A
Sbjct: 359 DISESGRIFFRNLAYTTNEEELRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTYMMPEHA 418
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
+A LD + F GRLLH++P++ + + ++L + + + K+ + ++ A + G
Sbjct: 419 LKAFNTLDGTDFHGRLLHLLPSKDIEKNSNEDLDENDASLSFKEKKALKLKKNAQKPIG- 477
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE--ANDLAVRIALGETQVIAETKKALTN 471
WN+LF+ + V E +A++ SK +LD + AVR+ALGETQV+ E K+ L
Sbjct: 478 ---WNTLFLGANAVAEILAKQFKTSKERILDTSDGGSSAAVRLALGETQVVIEMKRFLEE 534
Query: 472 AGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT 531
GV + + +E KRSN V L KNLP + EL +F ++G + +++LP +
Sbjct: 535 EGVRLDAFDE------PAKKRSNTVILAKNLPAATDISELTPIFSRYGPIGRIVLPPSGV 588
Query: 532 LALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDA 591
AL+ + +P+EA AFK LAY ++K PLYLEWAP V S++ + D V+ + +
Sbjct: 589 TALIEYCDPLEARQAFKKLAYSKFKNAPLYLEWAPEQVFSKTLS------GDPVIPKSEP 642
Query: 592 KRA----------LLEQQLE---GVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE 638
+ +++ + E DAD +P+ + +LF++NLNFKT E + KHF
Sbjct: 643 EPKEETKPEEKPIVIDAKAEEDSRAEDADDEPE--PNTTLFLRNLNFKTVQETVEKHF-R 699
Query: 639 HIKEGRILSVKVKKHLKNGKNV-SMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
H+ + + ++ +N + S+G+GFI+F A + ++LQ T +DG+ + L
Sbjct: 700 HLGSIHTVEIAKRRDPENPREFKSLGYGFIQFKKSSVAEHALKNLQLTHIDGNPVEL--- 756
Query: 698 HAKKDEQVVKK-----------AEKDKSSTKLLVRNVAFEAQRK 730
K+ ++V+K ++K ++ TK+LVRN+ F+AQ +
Sbjct: 757 --KRSDRVLKTQDNEGSQRRLASQKKQTGTKILVRNIPFQAQYR 798
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 16/164 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LPK++TED+LR F +G ITD +L T DGK RQF F+GF TE+EA+ AI++
Sbjct: 2 SRIIVKQLPKHITEDKLRQIFGAQGTITDLQLKYTPDGKFRQFCFVGFSTEEEAQSAIRH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEK-------EVSEDEKNPVLAAKRG 113
F+ + + T R+ E +G + P+ WS+Y+ +K + E + K+
Sbjct: 62 FDNTCIQTSRVRVESCAALGSEDKPQSWSKYAKDSKKNQDKLKEKEKEAAAKAKESEKKK 121
Query: 114 EKKTIEKVTE-----NDDPQLLEFLQVMQPRVKSK-MWANDTLI 151
+K+ ++KV + DDP+ EFL+ KS+ +W ND I
Sbjct: 122 KKEKVDKVDQILSRHKDDPEFQEFLEAHD---KSRTLWGNDLGI 162
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ V+ LP TED+LR+ F G ++++ + D K + +V ++ E A AI
Sbjct: 3 RIIVKQLPKHITEDKLRQIFGAQGTITDLQLKYTPDGK-FRQFCFVGFSTEEEAQSAIRH 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQE 385
DN+ Q + V S DK +
Sbjct: 62 FDNTCIQTSRVRVESCAALGSEDKPQ 87
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR--SK 340
N S + Q+ ++ VRN+P+ A E+R+ F FG + + I T +
Sbjct: 768 NEGSQRRLASQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHR 827
Query: 341 GIAYVLYAIPESASRAIEVLDNSI-FQGRLLHVMPARHKKSSDKQELHNSTS 391
G +V Y A RA + L S GR L + + + S D +EL T+
Sbjct: 828 GFGFVDYMSKAEAKRAFDALSASTHLYGRRLVLEWSANDDSQDVEELRKRTA 879
>gi|427792771|gb|JAA61837.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 687
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 246/421 (58%), Gaps = 27/421 (6%)
Query: 280 DPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS 339
D GNP Q+ + ++GR+F+RNL YT TE+EL E F K+G + EVH+ +D+ T++
Sbjct: 287 DLGNP-------QETLADTGRIFIRNLSYTITEEELEELFKKYGPLEEVHLSIDRVTRKP 339
Query: 340 KGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQ 399
KG A+V + PE A RA LD + QGRLLH++PA+ KKS +++ +GT+
Sbjct: 340 KGFAFVSFLFPEHAIRAFTELDGQMLQGRLLHLLPAKAKKSEEQE------GEGTEAKSY 393
Query: 400 RREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND-LAVRIALGE 458
+ ++E + ++SG + WN+LF+ + + + +A ++ SK +LL E + +AVR+ALGE
Sbjct: 394 KDKKEEELKKSSGRSHNWNTLFLGANALADVMAERYATSKQELLGTETGESVAVRMALGE 453
Query: 459 TQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKF 518
TQV+AET++ L + GV L+ F+ T+ RS V LVKNLP + +L +FGKF
Sbjct: 454 TQVVAETREFLESNGV---VLDAFNRPATE---RSKTVILVKNLPAKTPPKDLHSVFGKF 507
Query: 519 GSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS-QSSTSK 577
G L +V+LP AL+ F +P EA AAF+ LAY ++K VPLYLEWAP+ V S + S K
Sbjct: 508 GILSRVVLPPWGVTALIEFQDPTEARAAFRRLAYSKFKHVPLYLEWAPTGVFSTEKSADK 567
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
+ + + + K A E + + + +LF+KNLNF T +E +R+HF
Sbjct: 568 SKTEGETKTKDTEQKHAEQPADEEEEAENEEEIPPEPDTTLFIKNLNFSTDEEAVREHF- 626
Query: 638 EHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL 696
E +++ KK KN G+ +SMG+GF++F + A + L L L +Q
Sbjct: 627 EQCGPIHEVTIAKKKDTKNPGQLLSMGYGFVQFKQRKAAKQALKQLXTARL----LQVQA 682
Query: 697 C 697
C
Sbjct: 683 C 683
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 29 DAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPW 88
D +L TK+G R+FAF+GF+ E +A A +YFN SYLDT ++ EI +GD PR W
Sbjct: 1 DLQLKYTKEGVFRRFAFVGFKDEAQAAAAKEYFNNSYLDTSKLQVEICAALGDEQKPRSW 60
Query: 89 SRYS 92
S+YS
Sbjct: 61 SKYS 64
>gi|195175692|ref|XP_002028560.1| GL16640 [Drosophila persimilis]
gi|194104901|gb|EDW26944.1| GL16640 [Drosophila persimilis]
Length = 928
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 259/461 (56%), Gaps = 40/461 (8%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ ESGR+F RNL YT TE+E+++ F ++G V EV++ VDK T++ KG V Y +PE
Sbjct: 358 EEDISESGRIFFRNLAYTTTEEEMQKLFEQYGPVVEVNLPVDKLTRKIKGFGTVTYMMPE 417
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A LD + F GRLLH++P + +D+ + + G L + ++ K + +
Sbjct: 418 HALKAFNALDGTDFNGRLLHLLPGKELDKNDQSQADKADDFG---LSFKEKKALKLKKNA 474
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE--ANDLAVRIALGETQVIAETKKAL 469
WN+LF+ + V + +A++ SK +LD + AVR+ALGETQ++ E K+ L
Sbjct: 475 QKPIGWNTLFLGANAVADLLAKQFKTSKERILDTSEGGSSAAVRLALGETQIVIEMKRFL 534
Query: 470 TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST 529
GV +S+ +E S KRS V L KNLP + EL+ +F +FG + +++LP +
Sbjct: 535 EEEGVRLSAFDEPSQ------KRSRTVILAKNLPATTVVSELSPIFSRFGPIGRIVLPPS 588
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH 589
AL+ F EP EA AFK LAY ++K PLYLEWAP T+ N+ +
Sbjct: 589 GVTALIEFCEPSEARQAFKKLAYSKFKNAPLYLEWAPEQTF---VTTLSNEPIIRKTKQE 645
Query: 590 DAKRALLEQQLEGVT----------DADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEH 639
+ +R E+ + DA +P+ +LF++NLNFKT E + +HF H
Sbjct: 646 EPRRKEPEKTTPAIKEETRDERLAEDAGDEPE--PDTTLFLRNLNFKTVKETVLEHF-RH 702
Query: 640 IKEGRILSVKVKKHLKNGKNV----SMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
+ G I +V++ K K+ +N S+G+GFI+F + A + ++LQ T +DG+ + L+
Sbjct: 703 L--GSIHTVEIAKR-KDPQNPHQFSSLGYGFIQFKNASVADHALKNLQLTHIDGNPVELK 759
Query: 696 LCH---AKKDEQVVKK---AEKDKSSTKLLVRNVAFEAQRK 730
++E V ++ A+K ++ TK+LVRN+ F+AQ +
Sbjct: 760 RSDRVLRNQNEDVSRRGQAAQKKQTGTKILVRNIPFQAQYR 800
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 95/161 (59%), Gaps = 16/161 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LPK++TED+LR F KG ITD +L T DGK RQF F+G+ TE+EA++AI++
Sbjct: 2 SRIIVKQLPKHITEDKLRHIFGTKGNITDLQLKYTPDGKFRQFCFVGYSTEEEAQDAIQH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS-----LKKEK------EVSEDEKNPVLA 109
FN + + T R+ E +G P+ WS+YS L K K E E ++ A
Sbjct: 62 FNNTCIQTSRVRVESCAALGSEAKPKSWSKYSKDCKNLDKIKVAEEEEEKKESAESKKTA 121
Query: 110 AKRGEKKTIEKVTEN-DDPQLLEFLQVMQPRVKSK-MWAND 148
+ + K +E + ++ DDP+ EFLQ + K++ +W ND
Sbjct: 122 KPKKDTKVVEILGKHKDDPEFQEFLQAHE---KTRTLWGND 159
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 120/327 (36%), Gaps = 73/327 (22%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ +NLP T EL FS+FG + + + T A + + P A +A + L
Sbjct: 556 ILAKNLPATTVVSELSPIFSRFGPIGRIVLPPSGVT------ALIEFCEPSEARQAFKKL 609
Query: 361 DNSIFQGRLLHVMPARH-------------KKSSDKQELHNSTSQGTKTLKQRREEERKA 407
S F+ L++ A +K+ ++ + T +K+ +ER A
Sbjct: 610 AYSKFKNAPLYLEWAPEQTFVTTLSNEPIIRKTKQEEPRRKEPEKTTPAIKEETRDERLA 669
Query: 408 SEASGNTKAWNSLFMR-------PDTVVEN---IARKHGVSKSDLLDREANDLAVRIALG 457
+A + +LF+R +TV+E+ + H V + D + + G
Sbjct: 670 EDAGDEPEPDTTLFLRNLNFKTVKETVLEHFRHLGSIHTVEIAKRKDPQNPHQFSSLGYG 729
Query: 458 ETQVIAETKKALTNAGVNVSSLEEFSAGKTDG----LKRSNHVF---------------- 497
Q NA V +L+ DG LKRS+ V
Sbjct: 730 FIQ--------FKNASVADHALKNLQLTHIDGNPVELKRSDRVLRNQNEDVSRRGQAAQK 781
Query: 498 -------LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT--------LALVVFLEPVE 542
LV+N+P+ + E+ ++F FG L + +P T V F+ +
Sbjct: 782 KQTGTKILVRNIPFQAQYREVLEVFKAFGELRSLRIPKKVTAGEDAHRGFGFVDFITKAD 841
Query: 543 AAAAFKGL-AYKRYKGVPLYLEWAPSD 568
A AF L A G L LEWA D
Sbjct: 842 AKRAFDALSASTHLYGRRLVLEWASHD 868
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ V+ LP TED+LR F GN++++ + D K + +V Y+ E A AI+
Sbjct: 3 RIIVKQLPKHITEDKLRHIFGTKGNITDLQLKYTPDGK-FRQFCFVGYSTEEEAQDAIQH 61
Query: 360 LDNSIFQGRLLHV 372
+N+ Q + V
Sbjct: 62 FNNTCIQTSRVRV 74
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIV--VDKDTKRSKGIAYVLYAIPESASRAI 357
++ VRN+P+ A E+ E F FG + + I V +G +V + A RA
Sbjct: 787 KILVRNIPFQAQYREVLEVFKAFGELRSLRIPKKVTAGEDAHRGFGFVDFITKADAKRAF 846
Query: 358 EVLDNSI-FQGRLLHVMPARHKKSSDKQELHNSTS 391
+ L S GR L + A H +D +EL T+
Sbjct: 847 DALSASTHLYGRRLVLEWASHDDQNDLEELRKRTA 881
>gi|198470219|ref|XP_002133396.1| GA22839 [Drosophila pseudoobscura pseudoobscura]
gi|198145347|gb|EDY72024.1| GA22839 [Drosophila pseudoobscura pseudoobscura]
Length = 927
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 259/461 (56%), Gaps = 41/461 (8%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ ESGR+F RNL YT TE+E+++ F ++G V E+++ VDK T++ KG V Y +PE
Sbjct: 358 EEDISESGRIFFRNLAYTTTEEEMQKLFEQYGPVVEINLPVDKLTRKIKGFGTVTYMMPE 417
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A +A LD + F GRLLH++P + +D+ + + K+ + ++ A +
Sbjct: 418 HALKAFNALDGTDFNGRLLHLLPGKELDKNDQSQADKDDFGPSFKEKKALKLKKNAQKPI 477
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE--ANDLAVRIALGETQVIAETKKAL 469
G WN+LF+ + V + +A++ SK +LD + AVR+ALGETQ++ E KK L
Sbjct: 478 G----WNTLFLGANAVADLLAKQFKTSKERILDTSEGGSSAAVRLALGETQIVIEMKKFL 533
Query: 470 TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST 529
GV +S+ +E S KRS V L KNLP + EL+ +F +FG + +++LP +
Sbjct: 534 EEEGVRLSAFDEPSQ------KRSRTVILAKNLPATTVVSELSPIFSRFGPIGRIVLPPS 587
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH 589
AL+ F EP EA AFK LAY ++K PLYLEWAP T+ N+ +
Sbjct: 588 GVTALIEFCEPSEARQAFKKLAYSKFKNAPLYLEWAPEQTF---VTTLSNEPIIRKTKQE 644
Query: 590 DAKRALLEQQLEGVT----------DADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEH 639
+ +R E+ + DA +P+ +LF++NLNFKT E + +HF H
Sbjct: 645 EPRRKEPEKTTPAIKEETRDERLAEDAGDEPE--PDTTLFLRNLNFKTVKETVLEHF-RH 701
Query: 640 IKEGRILSVKVKKHLKNGKNV----SMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
+ G I +V++ K K+ +N S+G+GFI+F + A + ++LQ T +DG+ + L+
Sbjct: 702 L--GSIHTVEIAKR-KDPQNPHQFSSLGYGFIQFKNASVADHALKNLQLTHIDGNPVELK 758
Query: 696 LCH---AKKDEQVVKK---AEKDKSSTKLLVRNVAFEAQRK 730
++E V ++ A+K ++ TK+LVRN+ F+AQ +
Sbjct: 759 RSDRVLRNQNEDVSRRGQAAQKKQTGTKILVRNIPFQAQYR 799
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 92/160 (57%), Gaps = 14/160 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LPK++TED+LR+ F KG ITD +L T DGK RQF F+G+ E+EA++AI++
Sbjct: 2 SRIIVKQLPKHITEDKLRNIFGTKGNITDLQLKYTPDGKFRQFCFVGYSKEEEAQDAIQH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS-----LKKEK------EVSEDEKNPVLA 109
FN + + T R+ E +G P+ WS+YS L K K E E ++ A
Sbjct: 62 FNNTCIQTSRVRVESCAALGSEAKPKSWSKYSKDCKNLDKIKVAEEEEEKKESAESKKTA 121
Query: 110 AKRGEKKTIEKVTEN-DDPQLLEFLQVMQPRVKSKMWAND 148
+ + K +E + ++ DDP+ EFLQ + +W ND
Sbjct: 122 KPKKDTKVVEILGKHKDDPEFQEFLQAHEK--TRTLWGND 159
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 120/327 (36%), Gaps = 73/327 (22%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ +NLP T EL FS+FG + + + T A + + P A +A + L
Sbjct: 555 ILAKNLPATTVVSELSPIFSRFGPIGRIVLPPSGVT------ALIEFCEPSEARQAFKKL 608
Query: 361 DNSIFQGRLLHVMPARH-------------KKSSDKQELHNSTSQGTKTLKQRREEERKA 407
S F+ L++ A +K+ ++ + T +K+ +ER A
Sbjct: 609 AYSKFKNAPLYLEWAPEQTFVTTLSNEPIIRKTKQEEPRRKEPEKTTPAIKEETRDERLA 668
Query: 408 SEASGNTKAWNSLFMR-------PDTVVEN---IARKHGVSKSDLLDREANDLAVRIALG 457
+A + +LF+R +TV+E+ + H V + D + + G
Sbjct: 669 EDAGDEPEPDTTLFLRNLNFKTVKETVLEHFRHLGSIHTVEIAKRKDPQNPHQFSSLGYG 728
Query: 458 ETQVIAETKKALTNAGVNVSSLEEFSAGKTDG----LKRSNHVF---------------- 497
Q NA V +L+ DG LKRS+ V
Sbjct: 729 FIQ--------FKNASVADHALKNLQLTHIDGNPVELKRSDRVLRNQNEDVSRRGQAAQK 780
Query: 498 -------LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT--------LALVVFLEPVE 542
LV+N+P+ + E+ ++F FG L + +P T V F+ +
Sbjct: 781 KQTGTKILVRNIPFQAQYREVLEVFKAFGELRSLRIPKKVTAGEDAHRGFGFVDFITKAD 840
Query: 543 AAAAFKGL-AYKRYKGVPLYLEWAPSD 568
A AF L A G L LEWA D
Sbjct: 841 AKRAFDALSASTHLYGRRLVLEWASHD 867
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ V+ LP TED+LR F GN++++ + D K + +V Y+ E A AI+
Sbjct: 3 RIIVKQLPKHITEDKLRNIFGTKGNITDLQLKYTPDGK-FRQFCFVGYSKEEEAQDAIQH 61
Query: 360 LDNSIFQGRLLHV 372
+N+ Q + V
Sbjct: 62 FNNTCIQTSRVRV 74
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIV--VDKDTKRSKGIAYVLYAIPESASRAI 357
++ VRN+P+ A E+ E F FG + + I V +G +V + A RA
Sbjct: 786 KILVRNIPFQAQYREVLEVFKAFGELRSLRIPKKVTAGEDAHRGFGFVDFITKADAKRAF 845
Query: 358 EVLDNSI-FQGRLLHVMPARHKKSSDKQELHNSTS 391
+ L S GR L + A H +D +EL T+
Sbjct: 846 DALSASTHLYGRRLVLEWASHDDQNDLEELRKRTA 880
>gi|380018594|ref|XP_003693212.1| PREDICTED: probable RNA-binding protein 19-like [Apis florea]
Length = 900
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 161/457 (35%), Positives = 254/457 (55%), Gaps = 44/457 (9%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++ + ESGR+F+RNL YT TED++R+ F K+G ++EV++ +D+ T++SKG + + + E
Sbjct: 359 EESIAESGRMFIRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRKSKGFGTITFLMTE 418
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSS----DKQELHNSTSQGTKTLKQRREEERKA 407
A +A LD SI GR+LH++PA+ K S D++EL T KQ++ E KA
Sbjct: 419 HAVKAYSELDGSILDGRMLHLLPAKMKIDSLEELDEKEL---------TYKQKK--ELKA 467
Query: 408 SEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL--AVRIALGETQVIAET 465
A+G++ WN+LF+ + V + IA + +K ++L+ + L AV++ALGETQ++ +T
Sbjct: 468 KSAAGSSHNWNTLFLGQNAVADAIATTYNTTKENVLEDGSKGLSAAVKLALGETQLVQDT 527
Query: 466 KKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVI 525
K L GV + + + S+ +RS + LVKNLP + E+ ++F + G L +V+
Sbjct: 528 KNFLEENGVCLDAFNQPSS------ERSKTIILVKNLPAATPAQEIRQLFARHGELGRVV 581
Query: 526 LPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAV 585
+P + ALV FLEP EA AF LAY +YK +PLYLEWAP + + KN +
Sbjct: 582 MPPSGITALVEFLEPSEARKAFTKLAYTKYKHLPLYLEWAPDNSFITPAI-----KNKTI 636
Query: 586 VGEHDAKRALLEQQLEGVTDADIDP----------DRVESRSLFVKNLNFKTCDENLRKH 635
E + K +++ D + + +LFVKN+NF T DE L+ +
Sbjct: 637 KDETNKKTEEKQEKELLENVNDTNKVNKEESEDEDEPEPDTTLFVKNINFSTTDEQLKSY 696
Query: 636 FGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALIL 694
F + +S+ KK KN G +SMG+GF+ + A + LQ T+LDG L L
Sbjct: 697 F-DKCGPLHYVSIATKKDPKNPGAKLSMGYGFVRYKRKADADRALKVLQMTVLDGKTLEL 755
Query: 695 QLCH--AKKDEQVVKKAE--KDKSSTKLLVRNVAFEA 727
+ D + KK K ++ TK+L+RNV F+A
Sbjct: 756 KRSERTLTTDVKSAKKTSTVKAQTGTKILIRNVPFQA 792
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 103/171 (60%), Gaps = 21/171 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLPK +T+ +L++FFS+KG ITD +L TKDGK R+FAFIGF+TE++A A +Y
Sbjct: 2 SRLIVKNLPKNITDTKLKEFFSEKGLITDVQLKYTKDGKFRRFAFIGFKTEEQAIAAKEY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEK----------NPVLAA 110
F+K+ +DTCRIS E +GD + PR WS+Y+ + V +++ N +
Sbjct: 62 FDKTCIDTCRISVEQCASLGDSSKPRSWSKYASDSSRNVINNKQFNDKIENGNVNKTI-D 120
Query: 111 KRGEKKTIEKVTENDDPQLLE----------FLQVMQPRVKSKMWANDTLI 151
K+ E+ +K EN P++ E F++ ++ +W NDT++
Sbjct: 121 KKEERNKKDKKEENVKPEVKEALEKHKNDPLFMEFLESHTNKAIWNNDTIL 171
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 483 SAGKTDGLK-RSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST-------KTLAL 534
SA KT +K ++ L++N+P+ ++ E+ ++F FG L V LP + A
Sbjct: 768 SAKKTSTVKAQTGTKILIRNVPFQATAEEITELFKAFGELKAVRLPKKLVGVEKHRGFAF 827
Query: 535 VVFLEPVEAAAAFKGLAYKRY-KGVPLYLEWAPSD 568
V + EA AFK L + G L LEWA ++
Sbjct: 828 VEYYTKSEAKKAFKALCQSTHLYGRRLVLEWAQTE 862
>gi|194768695|ref|XP_001966447.1| GF22183 [Drosophila ananassae]
gi|190617211|gb|EDV32735.1| GF22183 [Drosophila ananassae]
Length = 939
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 158/465 (33%), Positives = 251/465 (53%), Gaps = 48/465 (10%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
++ ESGR+F RNL YT TE+EL++ F +FG V EV + VDK T++ KG V Y +PE A
Sbjct: 367 DISESGRIFFRNLAYTTTEEELQKLFEQFGPVVEVSLPVDKLTRKIKGFGTVTYMMPEHA 426
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
+A LD + F GRLLH++P + + D Q + + +L + ++ K + +
Sbjct: 427 LKAFNALDGTDFHGRLLHLLPGKDIEKKDPQ---DDLDENDASLSFKEKKALKLKKNAQK 483
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE--ANDLAVRIALGETQVIAETKKALTN 471
WN+LF+ + V + +A++ SK +LD + AVR+ALGETQ++ E K+ L
Sbjct: 484 PIGWNTLFLGANAVADLLAKQFKTSKEQILDTSGGGSGAAVRLALGETQIVVEMKRFLEE 543
Query: 472 AGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT 531
GV +S+ +E KRSN V L KNLP + EL +F +FG + +++LP +
Sbjct: 544 EGVRLSAFDE------PAKKRSNTVILAKNLPAATEVAELTPIFSRFGPIGRIVLPPSGV 597
Query: 532 LALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQS-----STSKGNQKNDA-- 584
AL+ + +P EA AFK LAY ++K PLYLEWAP V +++ + K K +
Sbjct: 598 TALIEYCDPSEARHAFKKLAYSKFKTAPLYLEWAPEHVFTKTLSGEPTIPKSEPKEEVSK 657
Query: 585 ----------VVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRK 634
E + + + + DA +P+ +LF++NLNFKT E + K
Sbjct: 658 SKGKSKKDAKKEEEQEKEEEEEKPKEPEPEDAHDEPE--PDTTLFLRNLNFKTTKETVEK 715
Query: 635 HFGEHIKEGRILSVKVKKHLKNGKNV-SMGFGFIEFDSVETATNVCRDLQGTILDGHALI 693
HF H+ L + V+K +N NV S+G+GFI+F A + +++Q T +DG+ +
Sbjct: 716 HF-RHLGTIHTLEIAVRKDAQNPSNVHSLGYGFIQFKKAAVAEHALKNMQLTHIDGNPVE 774
Query: 694 LQLCHAKKDEQVVKK-----------AEKDKSSTKLLVRNVAFEA 727
+ K+ ++V+K A+K ++ TK LVRN+ F+A
Sbjct: 775 I-----KRSDRVLKSQDNEGAQRRLTAQKKQTGTKFLVRNIPFQA 814
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 61/92 (66%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK LPK++TE++LR F +G ITD +L T DGK RQF F+G+ TE EA+ AIK+
Sbjct: 2 SRIIVKQLPKHITEEKLRQIFGAQGTITDLQLKYTPDGKFRQFCFVGYSTEDEAQAAIKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
F+ + + T R+ E +G P+ WS+Y+
Sbjct: 62 FDNTCIQTSRVRVESCAALGSEAKPQSWSKYA 93
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP----------STKTLALVVFLEP 540
K++ FLV+N+P+ ++ E+ +F FG L + +P S + V ++
Sbjct: 799 KQTGTKFLVRNIPFQATYHEVRDIFKAFGELKSLRIPKKATSGAGGESHRGFGFVDYMNK 858
Query: 541 VEAAAAFKGL-AYKRYKGVPLYLEWAPSD 568
EA AF+ + A G L LEW+ +D
Sbjct: 859 AEAKRAFEAISASTHLYGRRLVLEWSAND 887
>gi|157104329|ref|XP_001648356.1| RNA binding motif protein [Aedes aegypti]
gi|108880340|gb|EAT44565.1| AAEL004075-PA [Aedes aegypti]
Length = 860
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 153/460 (33%), Positives = 264/460 (57%), Gaps = 44/460 (9%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+ ++E+G+LF RNL Y+ ED+L++ F K+G V+E+ + +D +T++ KG V + +PE
Sbjct: 297 ESIIETGKLFFRNLAYSVKEDDLKQLFEKYGPVAEIDLPIDSNTRKLKGFGMVTFLMPEH 356
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG 412
A +A L+ + F GR+ H++PA+ ++ KQE+ + +L ++++E K + +
Sbjct: 357 AVQAYSELNGTFFHGRMFHLLPAKIDET--KQEVDEDDA----SLNFKQKKELKLKKTAQ 410
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN-DLAVRIALGETQVIAETKKALTN 471
++ WN+LFM + + E +A+K+G +K ++L E AVR+ALGET++++E ++ L +
Sbjct: 411 SSHNWNTLFMGENAIAEVVAKKYGKTKEEVLSTEGTTSAAVRLALGETEIVSEMRQFLVD 470
Query: 472 AGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT 531
G+++ + RSN + KNLP + EL + F KFG L +VILP +
Sbjct: 471 NGIHLDAFNGVPKA------RSNTTIIAKNLPAATELNELKERFDKFGLLGRVILPPSGV 524
Query: 532 LALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTS-KGNQKNDAVVGEHD 590
A++ FL+P EA AFK LAY R+K +PLYLEWAP ++ ++ +TS K + + ++ +
Sbjct: 525 SAVIEFLDPSEAKKAFKKLAYSRFKSLPLYLEWAPENIFAKPNTSVKEDTEGESTKIKKP 584
Query: 591 AKRALLEQQLEGVTD----------ADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHI 640
EQ+L+ +D+ P+ E +LF+KNL+F+T +E++R+ F
Sbjct: 585 KAPPKDEQELKEPMPEPVEPEKDEYSDLSPE--EGTTLFLKNLSFQTNEESIRETFRNM- 641
Query: 641 KEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL---- 696
G I SV+V + GKN S G+GFI+F ++A + ++LQ +DG + L
Sbjct: 642 --GPIHSVQVVRRKDGGKNESRGYGFIQFKLRKSADSALKNLQSVHIDGRKVELSRSDRT 699
Query: 697 ------CHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
H +K ++ K ++ TK+LVRNV F+A K
Sbjct: 700 LNTEADTHGRKASKL-----KKQTGTKILVRNVPFQANAK 734
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 89/155 (57%), Gaps = 13/155 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI +KN+P +TE +LRD FSQ G +TD +L T +GK R F FIG+ TE +A +AI +
Sbjct: 2 SRIIIKNIPNGITESKLRDHFSQCGIVTDIQLKYTPEGKFRNFGFIGYETEDQASKAISH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKK------EKEVSEDEKNPVLAAKRGE 114
FN ++L T +IS + + + WS+YS K +K++ + P+ K+GE
Sbjct: 62 FNNTFLRTSKISVAPCAALNEAKSLKVWSKYSKSKQDVKDLQKQLEDVTVKPI--KKKGE 119
Query: 115 KKTIEKVTE--NDDPQLLEFLQVMQPRVKSKMWAN 147
T E + + +DP EF+QV Q + + +W N
Sbjct: 120 --TAEDILQKHKNDPLFKEFVQV-QNKAGTAVWDN 151
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 170/430 (39%), Gaps = 75/430 (17%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ ++N+P TE +LR+HFS+ G V+++ + + K + ++ Y + AS+AI
Sbjct: 3 RIIIKNIPNGITESKLRDHFSQCGIVTDIQLKYTPEGK-FRNFGFIGYETEDQASKAISH 61
Query: 360 LDNSIFQGRLLHVMPA---RHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA 416
+N+ + + V P KS ++ + Q K L+++ E
Sbjct: 62 FNNTFLRTSKISVAPCAALNEAKSLKVWSKYSKSKQDVKDLQKQLE-------------- 107
Query: 417 WNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNV 476
D V+ I +K G + D+L + ND + + QV + A+ + +
Sbjct: 108 --------DVTVKPI-KKKGETAEDILQKHKNDPLFKEFV---QVQNKAGTAVWDNQLQQ 155
Query: 477 SSLE--------------------EFSAGKTDGLKRSNHVFLVK--NLPYDSSEGELAKM 514
+ E E S K LK +N +F+VK N+P + +L +
Sbjct: 156 TDSEGSGSEDEPEEQEPEKSEIKKEPSVDKKKELKVAN-LFVVKIHNIPSKTKRQDLLRF 214
Query: 515 FGKFGSLDKVILPSTKTLALVVFLEPVEA-AAAFKGLAYKRYKGVPLYLEWAPSDVLSQS 573
F I P K A V + E A K ++ K V + A + S+
Sbjct: 215 FKPVKPYSIRIPPKQKGFAYVGYKTEGELKKALLKDKSFLGGKQVKVVDFTAKDRLRSEE 274
Query: 574 STSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLR 633
S+ ++K + +Q E V I +E+ LF +NL + +++L+
Sbjct: 275 EKSQLSKKENPK----------WIRQKESVCSESI----IETGKLFFRNLAYSVKEDDLK 320
Query: 634 KHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALI 693
+ F ++ G + + + + + GFG + F E A +L GT H +
Sbjct: 321 QLFEKY---GPVAEIDLP--IDSNTRKLKGFGMVTFLMPEHAVQAYSELNGTFF--HGRM 373
Query: 694 LQLCHAKKDE 703
L AK DE
Sbjct: 374 FHLLPAKIDE 383
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 13/138 (9%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP---------STKTLALVVFLEPV 541
K++ LV+N+P+ ++ E+ +F FG L V LP S + V F+
Sbjct: 716 KQTGTKILVRNVPFQANAKEIRDLFKVFGELKSVRLPRKMVSSADESHRGFCFVDFVTEN 775
Query: 542 EAAAAFKGLAYKRY-KGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRA---LLE 597
+A AF+ L + G L LEWA +D + + +K G DAKR+ + +
Sbjct: 776 DAKQAFEALCQSTHLYGRRLVLEWAEADDGVEELRKRTAEKFAGTSGSSDAKRSRKGVFD 835
Query: 598 QQLEGVTDADIDPDRVES 615
G DAD D ES
Sbjct: 836 SSQMGTHDADRAEDVDES 853
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDG---KSRQFAFIGFRTEQEAEEAIK 59
+ +KNL E+ +R+ F G I +++R KDG +SR + FI F+ + A+ A+K
Sbjct: 620 LFLKNLSFQTNEESIRETFRNMGPIHSVQVVRRKDGGKNESRGYGFIQFKLRKSADSALK 679
Query: 60 YFNKSYLDTCRISCEIAR 77
++D ++ E++R
Sbjct: 680 NLQSVHIDGRKV--ELSR 695
>gi|350407885|ref|XP_003488228.1| PREDICTED: probable RNA-binding protein 19-like [Bombus impatiens]
Length = 900
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 252/454 (55%), Gaps = 38/454 (8%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ ESGR+F+RNL YT TED +R+ F K+G +SEV++ +D+ T++ KG + + + E A
Sbjct: 354 IAESGRMFIRNLSYTITEDNIRQLFEKYGPISEVNLPIDRTTRKPKGFGTITFLMAEHAV 413
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT 414
+A LD SI GR+LHV+PA+ KS +EL + L ++++E A A+G++
Sbjct: 414 KAYSELDGSILDGRMLHVLPAK-AKSDPMEELDE------RGLTYKQKKELTAKIAAGSS 466
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL--AVRIALGETQVIAETKKALTNA 472
WN+LF+ + V + IA + +K +L+ + L AV++ALGETQ++ +++K L
Sbjct: 467 HNWNTLFLGQNAVADTIAATYNTTKEKVLEDGSKGLSAAVKLALGETQLVQDSRKFLEEN 526
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL 532
GV L+ F+ KRS V LVKNLP S E+ ++F + G L + ++P +
Sbjct: 527 GV---CLDAFNQPPN---KRSKTVILVKNLPAASPAQEIRQLFARHGELGRFVMPPSGIT 580
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
ALV FLEP EA AF LAY +YK +PLYLEWAP + + N+ + E
Sbjct: 581 ALVEFLEPSEARKAFTQLAYTKYKHLPLYLEWAPDNSFTTPPPMGKNKATEVGANEKQNI 640
Query: 593 RALLEQQLEGVTDADIDPDRVESR------------SLFVKNLNFKTCDENLRKHFGEHI 640
+ +++Q E +++ D + +LFVKN+NF T +E L+ +FG
Sbjct: 641 KE-VDKQAEEFSESINDTNNANKEESEDEDEPEQETTLFVKNINFTTTEEQLKTYFG--- 696
Query: 641 KEGRI--LSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
K G + +S+ KK KN G +SMG+GF+ + A + LQ T+L+G L L+
Sbjct: 697 KCGALHYVSIATKKDPKNPGAKLSMGYGFVRYKRKVDADRALKVLQMTVLEGKTLELKRS 756
Query: 698 HAK--KDEQVVKKAE--KDKSSTKLLVRNVAFEA 727
D + VKK ++ TK+L+RNV F+A
Sbjct: 757 ERTLITDLKSVKKTSTVTAQTGTKILIRNVPFQA 790
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 98/172 (56%), Gaps = 20/172 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLPK +T+ +L++ FS+KG ITD +L TKDGK R+FAF+GF+TE++A +Y
Sbjct: 2 SRLIVKNLPKNITDTKLKELFSEKGLITDVQLKYTKDGKFRRFAFVGFKTEEQAIAVKEY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEK-EVSEDEKNPVLAAKRGEKKTIE 119
F+++ +DTC+IS E +GD + PR WS+Y+ + +++ + + K+T++
Sbjct: 62 FDQTCIDTCKISIEQCASLGDSSKPRAWSKYAPDSSRGKINNTDSTEITENTALNKRTVD 121
Query: 120 KVT-----------------ENDDPQLLEFLQVMQPRVKSKMWANDTLIGLM 154
K DDP +EFL+ +W NDT++ +
Sbjct: 122 KEKGKKEEGIKKEIREALEKHKDDPLFMEFLESHT--TDKAIWKNDTILAAI 171
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPST-------KTLALVVFLEPVEAAAAFKG 549
L++N+P+ ++ E+ ++F FG L V LP + A V + EA AFK
Sbjct: 781 ILIRNVPFQATVEEVTELFKAFGELKAVRLPKKLVGVEKHRGFAFVEYYTKSEAKKAFKA 840
Query: 550 LAYKRY-KGVPLYLEWAPSD 568
L + G L LEWA ++
Sbjct: 841 LCQSTHLYGRRLVLEWAQTE 860
>gi|268537328|ref|XP_002633800.1| C. briggsae CBR-RBD-1 protein [Caenorhabditis briggsae]
Length = 877
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 174/505 (34%), Positives = 265/505 (52%), Gaps = 73/505 (14%)
Query: 291 VQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIP 350
V++++LE+GRLF+RNLPY ED+L+ F K+G VSEV +++DK T KG A V + P
Sbjct: 271 VREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVIIDKKTGSCKGFAIVEFVFP 330
Query: 351 ESASRAIEVLDNSIFQGRLLHVMPARHKK---SSDKQELHNS-----------TSQGTKT 396
E+A A LD +F+GR++H++P K+ + D++ + + + K
Sbjct: 331 EAAVAAYSALDGYVFKGRMMHILPGDEKRDTPAEDQETVETAPDDPDNPTKAAVKKEKKK 390
Query: 397 LKQRREEERKASEASGNT-KAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLA-VRI 454
+ E+E + ++G T +WN+LF+ + + + +A++ V KSDLL + + A VR+
Sbjct: 391 KTFKDEKEEEKKASAGKTAHSWNALFLGANAIADTLAQRLNVKKSDLLTSDQGESAGVRL 450
Query: 455 ALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKM 514
AL ET+++ ET+ GV L+ FS KRS+ V L KNLP EL +M
Sbjct: 451 ALAETRLVRETRDFFLENGVK---LDAFS---KPAEKRSDTVMLAKNLPAGVETEELQRM 504
Query: 515 FGKFGSLDKVILPSTKTL-ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL--- 570
F KFG KV++PS + ALV+ PV+A AF+ LAY R++ PLYLEWAP DV+
Sbjct: 505 FEKFGDCQKVLMPSEGGVSALVIMGNPVDAKKAFRALAYSRFRSQPLYLEWAPYDVMGAT 564
Query: 571 ----------SQSSTSKGNQKNDAVVGEHDAKRALLEQQL-EGVTDADIDPDRVE----- 614
S+ T K + E +R +Q + E D +D D VE
Sbjct: 565 EQPKEEEQEKSEDYTKPKKSKREMTYEEKKKERKNRQQGITETEEDKKLDEDEVEETKES 624
Query: 615 --------------------SRSLFVKNLNFKTCDENL----RKHFGEHIKEGRILSVKV 650
++FVKNL F T D+ L RK +G+ +K +I K
Sbjct: 625 EPVEKKKKKEKKQPEREIESGSAIFVKNLAFDTTDDGLGSLFRKRYGDLVKNAQI--SKK 682
Query: 651 KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKK-DEQVVK-- 707
+ K +SMGFGF++F + A N +++QG +LDGH+L L++ H + D+ +K
Sbjct: 683 LNPAEPTKPLSMGFGFVQFYTALDAKNALKEMQGELLDGHSLELKISHRENVDKGALKRK 742
Query: 708 --KAEKDKSSTKLLVRNVAFEAQRK 730
K ++ TKLLVRN+ FEA K
Sbjct: 743 DVKQKEQGECTKLLVRNLPFEASIK 767
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ VKNLP TE +LR FF + G+I+DA L TK+GK R FAF+GF E A A+
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDESSASNAMAK 62
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
N+++ ++ R++ E R GD N PR WS+Y+
Sbjct: 63 SNQTFFNSKRLTVEECRPFGDANKPRAWSKYA 94
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL V+NLP T TE +LR+ F K+G +S+ + K+ K +G A+V + SAS A+
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGK-FRGFAFVGFLDESSASNAMAK 62
Query: 360 LDNSIFQGRLLHVMPAR 376
+ + F + L V R
Sbjct: 63 SNQTFFNSKRLTVEECR 79
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPVEAAAAFKG 549
LV+NLP+++S E+ +F FG+ + +P + V F+ EA AF
Sbjct: 755 LLVRNLPFEASIKEVETLFETFGAAKSIRIPRKPGQKLQHRGFGFVEFISTDEAFRAFDS 814
Query: 550 LAYKRY-KGVPLYLEWAPSD 568
L + + G L LEWA D
Sbjct: 815 LVHSTHLYGRRLVLEWAKED 834
>gi|400603073|gb|EJP70671.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 850
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 172/493 (34%), Positives = 270/493 (54%), Gaps = 43/493 (8%)
Query: 256 ECDSII-------KDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVL-ESGRLFVRNLP 307
ECDS+ K++ HS E+D + +P KD+ E + ++ RLFVRNLP
Sbjct: 273 ECDSLAAQEVGNDKEAPHS---EQDGTHDDQEPLPQQGQDKDLAAEAISKTSRLFVRNLP 329
Query: 308 YTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQG 367
Y+ATED+LRE F KFG V E+H+ ++ +KG A +L+ P A A LD + FQG
Sbjct: 330 YSATEDDLREEFEKFGGVDEIHLPINAQGT-AKGFAMLLFTKPSDAVAAFHALDGATFQG 388
Query: 368 RLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTV 427
R++H++PA K+ + S LK++ RK EAS T WNSL+M D V
Sbjct: 389 RIIHIIPADAKREHGVDDF----SLSNLPLKKQNLIRRK-KEASSTTFNWNSLYMSQDAV 443
Query: 428 VENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKT 487
++A + GVSKS++LD + D AV+ A+ ET VI ETK GV++ + +
Sbjct: 444 NSSVAARLGVSKSEVLDPTSADAAVKQAIAETSVIQETKAYFAANGVDLDAFKSH----- 498
Query: 488 DGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAF 547
KR + LVKN P+ ++ EL K+F +FG + +V++P T+A+V F + A +AF
Sbjct: 499 ---KRGDTAILVKNFPFGTTMEELRKLFEEFGPVLRVLMPPAGTIAIVQFAQANHAKSAF 555
Query: 548 KGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRAL-LEQQLEGVTDA 606
LAY+R K L+LE AP D+ + + + K ++ + A L + L G D
Sbjct: 556 GKLAYRRIKDSVLFLEKAPKDLFTSEAAAVSAAKANS---QPTATTKLSVSDLLTGGGD- 611
Query: 607 DIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMG 663
+ + VE+ SLF++NLNF T L + F +G +S +VK + K G+ +SMG
Sbjct: 612 KAEEEEVETTSLFIRNLNFDTTTSRLAEAF--QALDG-FVSARVKTKMDPKKPGQILSMG 668
Query: 664 FGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSS------TK 717
FGF EF + A + + G +LDGHAL ++ H K ++ ++ ++D++ TK
Sbjct: 669 FGFAEFRTKAQAQAALKAMDGHVLDGHALTVKASH-KGNDAAEERRKEDRAKKVAAKRTK 727
Query: 718 LLVRNVAFEAQRK 730
++++N+ F+A +K
Sbjct: 728 VVIKNLPFQATKK 740
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI VK LP +TE R FS ++TD KLM R+ ++G+++ ++A +A+K
Sbjct: 4 SRIFVKGLPTSLTEAEFRKHFSAGNRQVTDVKLM-----AQRRIGYVGYKSAEDAAKAVK 58
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPR-PWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTI 118
YFNK+Y+ +I E AR + +P + P + + EK + + + + G KK
Sbjct: 59 YFNKTYIRMSKIGVEPARAISNPASTKAPVATQTGAPEK--ATKVLSSAASVEDGSKKRK 116
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWANDTLI 151
+ + D +L E+L+VM +S + AN+T +
Sbjct: 117 REDLDQSDHKLQEYLRVMGTGRES-LVANETAV 148
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGN--VSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
+E+ R+FV+ LP + TE E R+HFS GN V++V ++ + I YV Y E A
Sbjct: 1 METSRIFVKGLPTSLTEAEFRKHFSA-GNRQVTDVKLMAQRR------IGYVGYKSAEDA 53
Query: 354 SRAIEVLDNSIFQGRLLHVMPAR 376
++A++ + + + + V PAR
Sbjct: 54 AKAVKYFNKTYIRMSKIGVEPAR 76
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ +KNLP T+ +R F G++ ++ + D SR FAF F T +EAE A+
Sbjct: 726 TKVVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADSSSRGFAFADFVTPREAENALNA 785
Query: 61 FNKSYLDTCRISCEI 75
++L R+ +
Sbjct: 786 LRDTHLLGRRLVLDF 800
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R F +G + V + D+ S+G A+ + P A A+
Sbjct: 727 KVVIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADSS-SRGFAFADFVTPREAENALNA 785
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 786 LRDTHLLGRRL 796
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V K + S GF F +F + A N
Sbjct: 728 VVIKNLPFQATKKDIRTLFGTY---GQLRSVRVPK---KADSSSRGFAFADFVTPREAEN 781
Query: 678 VCRDLQGTILDGHALILQL 696
L+ T L G L+L
Sbjct: 782 ALNALRDTHLLGRRLVLDF 800
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
++KNLP+ +++ ++ +FG +G L V +P S++ A F+ P EA A L
Sbjct: 729 VIKNLPFQATKKDIRTLFGTYGQLRSVRVPKKADSSSRGFAFADFVTPREAENALNALRD 788
Query: 553 KRYKGVPLYLEW 564
G L L++
Sbjct: 789 THLLGRRLVLDF 800
>gi|328791232|ref|XP_624611.3| PREDICTED: probable RNA-binding protein 19-like [Apis mellifera]
Length = 889
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 163/459 (35%), Positives = 254/459 (55%), Gaps = 49/459 (10%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++ + ESGR+F+RNL YT TED++R+ F K+G ++EV++ +D+ T++ KG + + + E
Sbjct: 349 EESIAESGRMFIRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRKLKGFGTITFLMTE 408
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQRREEERKASE 409
A +A LD SI GR+LH++PA+ K S DK+EL T KQ++E + K +
Sbjct: 409 HAVKAYSELDGSILDGRMLHLLPAKMKIDSLEDKKEL---------TYKQKKELKAKTTA 459
Query: 410 ASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL--AVRIALGETQVIAETKK 467
S + WN+LF+ + V IA + +K ++L+ + L AV++ALGETQ++ +TK
Sbjct: 460 RSSHN--WNTLFLGQNAVANAIATTYNTTKENVLEDRSKGLSAAVKLALGETQLVQDTKN 517
Query: 468 ALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP 527
L GV + + + S +RS + L KNLP +S E+ ++F + G L +V++P
Sbjct: 518 FLEENGVCLDAFNQPSN------ERSKTIILAKNLPAATSAQEIRQLFARHGELGRVVMP 571
Query: 528 STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVG 587
+ ALV FLEP EA A+ LAY +YK +PLYLEWAP + K N+
Sbjct: 572 PSGITALVEFLEPSEARKAYTKLAYTKYKYLPLYLEWAPHNSFITPPAVKNKTINETKEK 631
Query: 588 EHDAKRALLEQQL-EGVTDAD--------IDPDRVESRSLFVKNLNFKTCDENLRKHFGE 638
D K+ E++L E V D + + + +LFVKN+NF T DE L+ +F +
Sbjct: 632 IEDEKQ---EKELSENVNDTNKTNKEESEDEEEPEPDTTLFVKNINFSTTDEQLKTYF-D 687
Query: 639 HIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ-- 695
+S+ +KK KN G +SMG+GF+ + A + LQ T+LDG L L+
Sbjct: 688 KCGPLHYVSIAMKKDPKNPGAKLSMGYGFVRYKRKADADRALKVLQMTVLDGKTLELKRS 747
Query: 696 -------LCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
+ AKK V K ++ TK+L+RNV F+A
Sbjct: 748 ERTLTTDVKSAKKTSTV-----KAQTGTKILIRNVPFQA 781
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 29/175 (16%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLPK +T+ +L++ FSQKG ITD +L TKDGK R+FAFIGF+TE++A A +Y
Sbjct: 2 SRLIVKNLPKNITDIKLKELFSQKGLITDVQLKYTKDGKFRRFAFIGFKTEEQAIVAKEY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEV-----SEDEKNPVLA------ 109
F+K+ +DTCRIS E +GD + PR WS+Y+ K V S D+ V A
Sbjct: 62 FDKTCIDTCRISVEQCASLGDSSKPRSWSKYASDSSKNVINNKQSSDKPENVNANKTTDK 121
Query: 110 -------------AKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLI 151
K K+ +EK +DP +EFL + +W NDT++
Sbjct: 122 KKEKNKKDKKEENVKPEVKEALEK--HKNDPLFMEFL---ESHTNKAIWNNDTIL 171
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR-----SKGIAYVLYAIPESASR 355
LFV+N+ ++ T+++L+ +F K G + V I + KD K S G +V Y A R
Sbjct: 668 LFVKNINFSTTDEQLKTYFDKCGPLHYVSIAMKKDPKNPGAKLSMGYGFVRYKRKADADR 727
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS----QGTKTLKQRREEERKASEAS 411
A++VL ++ G+ L + + ++D + +++ GTK L + + A E +
Sbjct: 728 ALKVLQMTVLDGKTLELKRSERTLTTDVKSAKKTSTVKAQTGTKILIRNVPFQATAEEIT 787
Query: 412 GNTKAWNSL 420
KA+ L
Sbjct: 788 ELFKAFGEL 796
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 125/322 (38%), Gaps = 65/322 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI-AYVLYAIPESASRAIEV 359
+ +NLP + E+R+ F++ G + V + GI A V + P A +A
Sbjct: 541 ILAKNLPAATSAQEIRQLFARHGELGRVVMP-------PSGITALVEFLEPSEARKAYTK 593
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWN- 418
L + ++ L++ A H + N T TK + ++E++ SE +T N
Sbjct: 594 LAYTKYKYLPLYLEWAPHNSFITPPAVKNKTINETKEKIEDEKQEKELSENVNDTNKTNK 653
Query: 419 -------------SLFMRP----------DTVVENIARKHGVSKSDLLDREANDLAVRIA 455
+LF++ T + H VS + + ++ + +++
Sbjct: 654 EESEDEEEPEPDTTLFVKNINFSTTDEQLKTYFDKCGPLHYVSIA--MKKDPKNPGAKLS 711
Query: 456 LGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVF------------------ 497
+G + +KA + + V + GKT LKRS
Sbjct: 712 MG-YGFVRYKRKADADRALKVLQMTVLD-GKTLELKRSERTLTTDVKSAKKTSTVKAQTG 769
Query: 498 ---LVKNLPYDSSEGELAKMFGKFGSLDKVILPST-------KTLALVVFLEPVEAAAAF 547
L++N+P+ ++ E+ ++F FG L V LP + A V + EA AF
Sbjct: 770 TKILIRNVPFQATAEEITELFKAFGELKAVRLPKKLVGVEKHRGFAFVEYYTKSEAKKAF 829
Query: 548 KGLAYKRY-KGVPLYLEWAPSD 568
K L + G L LEWA ++
Sbjct: 830 KALCQSTHLYGRRLVLEWAQTE 851
>gi|341892788|gb|EGT48723.1| CBN-RBD-1 protein [Caenorhabditis brenneri]
Length = 876
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 268/504 (53%), Gaps = 78/504 (15%)
Query: 291 VQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIP 350
V++++LE+GRLF+RNLPY ED+L+ F K+G VSEV +V+DK T KG A V + P
Sbjct: 271 VREKILETGRLFIRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGNCKGFAIVEFVFP 330
Query: 351 ESASRAIEVLDNSIFQGRLLHVMPA---RHKKSSDKQE---------LHNSTSQGTKTLK 398
E+A A D +F+GR++H++ R K + D E + + KT
Sbjct: 331 EAAVAAYSACDGYVFKGRMMHIIAGDEKRDKPAVDDVEAIPDDPDNPMKVKAKKEKKTKS 390
Query: 399 QRREEERKASEASGNTK-AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLA-VRIAL 456
+ E+E + +G T +WN+LF+ + + + +A++ V KSDLL + + A VR+AL
Sbjct: 391 FKEEKEEEKKATAGKTAHSWNALFLGANAIADTLAQRLNVKKSDLLTSDQGESAGVRLAL 450
Query: 457 GETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFG 516
ET+++ ET+ GV L+ FS KRS+ V L KNLP EL +MF
Sbjct: 451 AETRLVRETRDFFLENGVK---LDAFS---KPAEKRSDTVILAKNLPAGVETEELQRMFE 504
Query: 517 KFGSLDKVILPSTKTL-ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
KFG KV++PS + ALV+ PV+A AF+ LAY R++ PLYLEWAP DVL +
Sbjct: 505 KFGDCQKVLMPSEGGVSALVIMGNPVDAKKAFRALAYSRFRSQPLYLEWAPFDVLGAAEP 564
Query: 576 S-KGNQKNDAVVGEHDAKRALLEQQ--------LEGVTDA--------------DIDPDR 612
+ +QK++ +KR + ++ +G+TD D P+
Sbjct: 565 PVETDQKSEEPQKPKKSKREMTYEEKKKERKNRQQGITDEDEEREKEENEGGTEDKKPET 624
Query: 613 VESR-----------------SLFVKNLNFKTCDENL----RKHFGEHIKEGRILSVKVK 651
E++ ++FVKNL F T D+ L RK +G+ +K S ++
Sbjct: 625 SETKPKKASKKLSEKEIESGSAIFVKNLAFDTTDDGLDSLFRKRYGDLVK-----SAQIS 679
Query: 652 KHLKNG---KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKK-DEQVVK 707
K L K +SMGFGF++F + A +++QG +LDGH+L L++ H + D+ +K
Sbjct: 680 KKLNPAEPTKPLSMGFGFVQFYTSLDAKQALKEMQGELLDGHSLELKISHRENVDKGALK 739
Query: 708 KAE---KDKS-STKLLVRNVAFEA 727
+ E KD+ TKLLVRN+ FEA
Sbjct: 740 RKEIRQKDQGECTKLLVRNLPFEA 763
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 60/92 (65%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ VKNLP TE +LR FF + G+I+DA L TK+GK R FAF+GF E A AI
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSAANAISK 62
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
N+++ ++ R++ E R GD N PR WS+Y+
Sbjct: 63 SNQTFFNSKRLTVEECRPFGDANKPRAWSKYA 94
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL V+NLP T TE +LR+ F K+G +S+ + K+ K +G A+V + SA+ AI
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGK-FRGFAFVGFLDEGSAANAISK 62
Query: 360 LDNSIFQGRLLHVMPAR 376
+ + F + L V R
Sbjct: 63 SNQTFFNSKRLTVEECR 79
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPST-------KTLALVVFLEPVEAAAAFKG 549
LV+NLP+++S E+ +F FG++ + +P + V F+ EA AF
Sbjct: 754 LLVRNLPFEASIKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDFISADEARRAFDA 813
Query: 550 LAYKRY-KGVPLYLEWAPSD 568
L + + G L LEWA D
Sbjct: 814 LVHSTHLYGRRLVLEWAKED 833
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS-KGIAYVLYAIP 350
Q++ E +L VRNLP+ A+ E+ F FG V + I K+ +G +V +
Sbjct: 745 QKDQGECTKLLVRNLPFEASIKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDFISA 804
Query: 351 ESASRAIEVLDNSI-FQGRLL 370
+ A RA + L +S GR L
Sbjct: 805 DEARRAFDALVHSTHLYGRRL 825
>gi|308450796|ref|XP_003088431.1| hypothetical protein CRE_22247 [Caenorhabditis remanei]
gi|308247287|gb|EFO91239.1| hypothetical protein CRE_22247 [Caenorhabditis remanei]
Length = 901
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 169/510 (33%), Positives = 266/510 (52%), Gaps = 83/510 (16%)
Query: 291 VQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIP 350
V++++LE+GRLF+RNLPY ED+L+ F K+G VSEV +V+DK T KG A V + P
Sbjct: 295 VREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGSCKGFAIVEFVFP 354
Query: 351 ESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQE-------------LHNSTSQGTKTL 397
E+A A LD +F+GR++H++ K+ +E + K
Sbjct: 355 EAAVAAYSALDGYVFKGRMMHIIAGDEKRDKPTEEDAETVPDDPDNPTKATDKKEKKKKT 414
Query: 398 KQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLA-VRIAL 456
+ ++++K ++A +WN+LF+ + + + +A++ V KSDLL + + A VR+AL
Sbjct: 415 FKEEKQDQKKADAGKTAHSWNALFLGANAIADTLAQRLNVKKSDLLTSDQGESAGVRLAL 474
Query: 457 GETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFG 516
ET+++ ET+ GV L+ FS KRS+ V + KNLP EL +MF
Sbjct: 475 AETRLVRETRDFFLENGVK---LDAFS---KPAEKRSDTVMIAKNLPSGVETEELKRMFE 528
Query: 517 KFGSLDKVILPSTKTL-ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQS-S 574
KFG KV++P+ + ALV+ PV+A AF+ LAY R++ PLYLEWAP DV+ +
Sbjct: 529 KFGDCQKVLMPAEGGVSALVIMGNPVDAKKAFRALAYSRFRSQPLYLEWAPFDVMGATVP 588
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQ--------LEGVTDA-----------------DID 609
+++ ++K D +KR + ++ +G+T+ D
Sbjct: 589 STETSEKTDDSTKPKKSKREMTYEEKKKERKNRQQGITEEEEEVEKKSNEEEVEVPEDKK 648
Query: 610 PDRVESR---------------SLFVKNLNFKTCDENL----RKHFGEHIKEGRILSVKV 650
P+ E++ ++FVKNL F T D L RK +G+ +K S ++
Sbjct: 649 PEPSETKPKKAKQPEKEIESGSTIFVKNLAFDTTDYGLETLFRKRYGDLLK-----SAQI 703
Query: 651 KKHLKNG---KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH-------AK 700
K L K +SMGFGF++F + A +++QG +LDGH+L L++ H A
Sbjct: 704 SKKLNPAEPTKPLSMGFGFVQFYTAFDAKTALKEMQGELLDGHSLELKISHREVVDKGAL 763
Query: 701 KDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
K + V KK + + TKLLVRN+ FEA K
Sbjct: 764 KRKDVQKKDQGE--CTKLLVRNLPFEASIK 791
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 60/92 (65%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ VKNLP TE +LR FF + G+I+DA L TK+GK R FAF+GF E A AI
Sbjct: 12 TRLIVKNLPSTCTEQQLRKFFEKYGKISDASLKYTKEGKFRGFAFVGFLDEGSASNAIAK 71
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
N+++ ++ R++ E R GD N PR WS+Y+
Sbjct: 72 SNQTFFNSKRLTVEECRPFGDANKPRAWSKYA 103
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL V+NLP T TE +LR+ F K+G +S+ + K+ K +G A+V + SAS AI
Sbjct: 13 RLIVKNLPSTCTEQQLRKFFEKYGKISDASLKYTKEGK-FRGFAFVGFLDEGSASNAIAK 71
Query: 360 LDNSIFQGRLLHVMPAR 376
+ + F + L V R
Sbjct: 72 SNQTFFNSKRLTVEECR 88
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 277 EIVDPGNPSSSSKDVQQ-EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKD 335
E+VD G + KDVQ+ + E +L VRNLP+ A+ E+ F FG V + I
Sbjct: 756 EVVDKG--ALKRKDVQKKDQGECTKLLVRNLPFEASIKEVETLFETFGAVKTIRIPRKPG 813
Query: 336 TKRS-KGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
K+ +G +V + + A RA + L +S GR L
Sbjct: 814 QKQQHRGFGFVDFISADEARRAFDALVHSTHLYGRRL 850
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPST-------KTLALVVFLEPVEAAAAFKG 549
LV+NLP+++S E+ +F FG++ + +P + V F+ EA AF
Sbjct: 779 LLVRNLPFEASIKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDFISADEARRAFDA 838
Query: 550 LAYKRY-KGVPLYLEWAPSD 568
L + + G L LEWA D
Sbjct: 839 LVHSTHLYGRRLVLEWAKED 858
>gi|70990768|ref|XP_750233.1| pre-rRNA processing protein Mrd1 [Aspergillus fumigatus Af293]
gi|74669789|sp|Q4WJT7.1|MRD1_ASPFU RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|66847865|gb|EAL88195.1| pre-rRNA processing protein Mrd1, putative [Aspergillus fumigatus
Af293]
Length = 825
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 246/449 (54%), Gaps = 48/449 (10%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S RLFVRNLPY A+E +L FSKFG + E+H+ D + SKG AYV Y P++A +A
Sbjct: 300 SSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAY 359
Query: 358 EVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
+ LD FQGRL+H++PA KK+ D+ EL LK++++ +RK EAS +T
Sbjct: 360 KELDGKHFQGRLMHILPATAKKTYKIDEHELSKL------PLKKQKQIKRKL-EASSSTF 412
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVN 475
+WNSL+M D V+ ++A + GVSK+DLLD + D AV+ A ET VI ETK T GVN
Sbjct: 413 SWNSLYMNTDAVMSSVAERLGVSKADLLDPTSADAAVKQAHAETHVIQETKAYFTANGVN 472
Query: 476 VSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALV 535
+ + ++ +R N LVKN Y +L K+F +G + ++++P + T+A+V
Sbjct: 473 LDAFKQ--------RERGNTAILVKNFSYGVKVDDLRKLFEPYGQITRLLMPPSGTIAIV 524
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRAL 595
F P EA AFKGLAY++ L+LE AP+++ ++ + + V
Sbjct: 525 EFARPDEAQKAFKGLAYRKVGDSILFLEKAPANLFDATTAPQTSVLETKAVS-------- 576
Query: 596 LEQQLEGVTDADI----DPDR-VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS-VK 649
+G + AD D D V + +LFVKNLNF T +E + F +G + + +K
Sbjct: 577 -----QGFSTADTFAAEDGDEPVVTSTLFVKNLNFSTTNERFTEVFKPL--DGFVSARIK 629
Query: 650 VKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD------ 702
K K GK +SMGFGF++F + A + G LD H L+++ + D
Sbjct: 630 TKPDPKRPGKTLSMGFGFVDFRTKAQAQAALAAMDGYKLDQHELVVRASNKAMDAAEERR 689
Query: 703 -EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
E KK + TK++++N+ F+A +K
Sbjct: 690 REDTAKKIAARR--TKIIIKNLPFQATKK 716
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V K + GFGF +F S A N
Sbjct: 704 IIIKNLPFQATKKDVRSLFGAY---GQLRSVRVPKKFDRS---ARGFGFADFVSAREAEN 757
Query: 678 VCRDLQGTILDGHALILQLCH--AKKDEQVVKKAEK 711
L+ T L G L+L+ + A EQ +++ EK
Sbjct: 758 AMDALKNTHLLGRRLVLEFANEEAVDPEQEIEQIEK 793
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 172/428 (40%), Gaps = 61/428 (14%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E+ R+FV LP T T D+LR HFS +++ H++ + I +V + E+A +
Sbjct: 1 MENTRVFVSGLPPTFTNDQLRMHFSSRFQITDAHVLP------KRRIGFVGFKSSEAAQQ 54
Query: 356 AIEVLDNSIFQGRLLHV--------MPARHKKSSDKQELHNSTSQGTKTLKQRREEERKA 407
A + + + + V P + + K N ++ G K LK++R+ +
Sbjct: 55 AASYFNKTYVKMSKISVEIAKPIDSEPVKKAEKHRKGSTSNDSTAG-KALKRKRDGDN-- 111
Query: 408 SEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKK 467
++ + + S+ RP K + D L+ N A T + E ++
Sbjct: 112 TQKDPQLQEYLSVIERPSKT------KTWANGDDFLNTIQNQPA-------TSELREEQR 158
Query: 468 ALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP 527
T+ V S ++ + D + ++ H + + D +E E + G ++ + P
Sbjct: 159 DDTSEKVEEHSHKQRKKPRVDDVPKAAHDREPEPMVLDKTEEEHERANAD-GQVEAI--P 215
Query: 528 STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ----------SSTSK 577
T+ A EPV A + R G+ E A D +Q + +
Sbjct: 216 PTQEEA-----EPVSDADWLRS-KTSRLLGLLDEDEQAEFDSTAQRKPDPSSEPETVSKA 269
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
G Q +D D K A+ E D +I+ R+ SR LFV+NL + + +L F
Sbjct: 270 GAQHSD------DDKAAVESSVEEEEVDTNIEHIRLSSR-LFVRNLPYDASESDLEPVFS 322
Query: 638 EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
K G+I + V S GF ++++ + A ++L G G + +
Sbjct: 323 ---KFGKIEEIHVA--FDTRSTTSKGFAYVQYIEPDAAVQAYKELDGKHFQGRLMHILPA 377
Query: 698 HAKKDEQV 705
AKK ++
Sbjct: 378 TAKKTYKI 385
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R F F F + +EAE A+
Sbjct: 702 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMDA 761
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ E A
Sbjct: 762 LKNTHLLGRRLVLEFA 777
>gi|159130709|gb|EDP55822.1| pre-rRNA processing protein Mrd1, putative [Aspergillus fumigatus
A1163]
Length = 825
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 246/449 (54%), Gaps = 48/449 (10%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S RLFVRNLPY A+E +L FSKFG + E+H+ D + SKG AYV Y P++A +A
Sbjct: 300 SSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAY 359
Query: 358 EVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
+ LD FQGRL+H++PA KK+ D+ EL LK++++ +RK EAS +T
Sbjct: 360 KELDGKHFQGRLMHILPATAKKTYKIDEHELSKL------PLKKQKQIKRKL-EASSSTF 412
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVN 475
+WNSL+M D V+ ++A + GVSK+DLLD + D AV+ A ET VI ETK T GVN
Sbjct: 413 SWNSLYMNTDAVMSSVAERLGVSKADLLDPTSADAAVKQAHAETHVIQETKAYFTANGVN 472
Query: 476 VSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALV 535
+ + ++ +R N LVKN Y +L K+F +G + ++++P + T+A+V
Sbjct: 473 LDAFKQ--------RERGNTAILVKNFSYGVKVDDLRKLFEPYGQITRLLMPPSGTIAIV 524
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRAL 595
F P EA AFKGLAY++ L+LE AP+++ ++ + + V
Sbjct: 525 EFARPDEAQKAFKGLAYRKVGDSILFLEKAPANLFDATTAPQTSVLETKAVS-------- 576
Query: 596 LEQQLEGVTDADI----DPDR-VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS-VK 649
+G + AD D D V + +LFVKNLNF T +E + F +G + + +K
Sbjct: 577 -----QGFSTADTFAAEDGDEPVVTSTLFVKNLNFSTTNERFTEVFKPL--DGFVSARIK 629
Query: 650 VKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD------ 702
K K GK +SMGFGF++F + A + G LD H L+++ + D
Sbjct: 630 TKPDPKRPGKTLSMGFGFVDFRTKAQAQAALAAMDGYKLDQHELVVRASNKAMDAAEERR 689
Query: 703 -EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
E KK + TK++++N+ F+A +K
Sbjct: 690 REDTAKKIAARR--TKIIIKNLPFQATKK 716
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 173/428 (40%), Gaps = 61/428 (14%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E+ R+FV LP T T D+LR+HFS +++ H++ + I +V + E+A +
Sbjct: 1 MENTRVFVSGLPPTFTNDQLRKHFSSRFQITDAHVLP------KRRIGFVGFKSSEAAQQ 54
Query: 356 AIEVLDNSIFQGRLLHV--------MPARHKKSSDKQELHNSTSQGTKTLKQRREEERKA 407
A + + + + V P + + K N ++ G K LK++R+ +
Sbjct: 55 AASYFNKTYVKMSKISVEIAKPIDSEPVKKAEKHRKGSTSNDSTAG-KALKRKRDGDN-- 111
Query: 408 SEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKK 467
++ + + S+ RP K + D L+ N A T + E ++
Sbjct: 112 TQKDPQLQEYLSVIERPSKT------KTWANGDDFLNTIQNQPA-------TSELREEQR 158
Query: 468 ALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP 527
T+ V S ++ + D + ++ H + + D +E E + G ++ + P
Sbjct: 159 DDTSEKVEEHSHKQRKKPRVDDVPKAAHDREPEPMVLDKTEEEHERANAD-GQVEAI--P 215
Query: 528 STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ----------SSTSK 577
T+ A EPV A + R G+ E A D +Q + +
Sbjct: 216 PTQEEA-----EPVSDADWLRS-KTSRLLGLLDEDEQAEFDSTAQRKPDPSSEPETVSKA 269
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
G Q +D D K A+ E D +I+ R+ SR LFV+NL + + +L F
Sbjct: 270 GAQHSD------DDKAAVESSVEEEEVDTNIEHIRLSSR-LFVRNLPYDASESDLEPVFS 322
Query: 638 EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
K G+I + V S GF ++++ + A ++L G G + +
Sbjct: 323 ---KFGKIEEIHVA--FDTRSTTSKGFAYVQYIEPDAAVQAYKELDGKHFQGRLMHILPA 377
Query: 698 HAKKDEQV 705
AKK ++
Sbjct: 378 TAKKTYKI 385
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V K + GFGF +F S A N
Sbjct: 704 IIIKNLPFQATKKDVRSLFGAY---GQLRSVRVPKKFDRS---ARGFGFADFVSAREAEN 757
Query: 678 VCRDLQGTILDGHALILQLCH--AKKDEQVVKKAEK 711
L+ T L G L+L+ + A EQ +++ EK
Sbjct: 758 AMDALKNTHLLGRRLVLEFANEEAVDPEQEIEQIEK 793
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R F F F + +EAE A+
Sbjct: 702 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMDA 761
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ E A
Sbjct: 762 LKNTHLLGRRLVLEFA 777
>gi|224000233|ref|XP_002289789.1| potential RNA bindin g protein [Thalassiosira pseudonana CCMP1335]
gi|220974997|gb|EED93326.1| potential RNA bindin g protein [Thalassiosira pseudonana CCMP1335]
Length = 886
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/463 (38%), Positives = 259/463 (55%), Gaps = 34/463 (7%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
Q + + RLFVRNLP+T TE+EL E FS+FG+V+ VHI VD DTKR+KG A++ Y
Sbjct: 324 QPSITLADRLFVRNLPFTTTEEELFETFSQFGSVAAVHIPVD-DTKRNKGYAFISYQSKH 382
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
A AI+ +D FQGRL+H++PAR D + T K+R+ R+ EA
Sbjct: 383 DAKLAIDTMDGEDFQGRLIHILPARPSNEPDAD-----GNNANLTYKERQALARQ-KEAE 436
Query: 412 GNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE----ANDLAVRIALGETQVIAETKK 467
T++W++ F+R DTVV+NI+ + GVSK D+L+ + + + AVR+ALGET +IAE
Sbjct: 437 NATQSWSASFLRGDTVVDNISDRLGVSKGDVLNVKDGISSGNAAVRLALGETHIIAENIA 496
Query: 468 ALTNAGVNVSSLE-------EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG- 519
GV+V +LE G KRS LVKNLPYD+S EL K F G
Sbjct: 497 FFEMHGVDVRALESKKSNSSSDKGGGGSASKRSATTILVKNLPYDTSLEELTKAFHSIGG 556
Query: 520 -SLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAP-SDVLSQSSTSK 577
+ +++LP +KT ALV + +A AF+ LAYK++K VPLYLEWAP D + + +
Sbjct: 557 DAPRRILLPPSKTAALVEYDHATDARRAFRRLAYKKFKHVPLYLEWAPMMDAVKKKDEAV 616
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
N +D V E + +++ L + D + D +++++VKNLNF T ++ L++ F
Sbjct: 617 ENGTSDNVQMECNNDHNTVKKDL--MDADDHNADADNTQTIYVKNLNFNTSEDELKRQFT 674
Query: 638 EHIKEGRILSVKVKKHL---------KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILD 688
R + + K K VSMG+GF+EF S E A + LQG ++D
Sbjct: 675 SVGFVPRAVKIPTKAAPMKKQSPADDSETKLVSMGYGFVEFVSEEEAKKAMKSLQGKLVD 734
Query: 689 GHALILQLCHAKKDEQVVKKAEKDKSS--TKLLVRNVAFEAQR 729
GH+L ++L + DK+S TK+++RN+ FEA R
Sbjct: 735 GHSLDIKLSNKSLSSSKSSAPTIDKASKNTKIMIRNIPFEATR 777
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 494 NHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFK 548
N +++N+P++++ E+ ++FG FG L KV LP + + FL EA A
Sbjct: 763 NTKIMIRNIPFEATRSEILQLFGTFGQLKKVRLPKKFDGTHRGFGFCEFLTRKEAQNAMA 822
Query: 549 GLAYKRYKGVPLYLEWA 565
L+ G L LEWA
Sbjct: 823 TLSRTHLYGRHLVLEWA 839
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 35/66 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I ++N+P T + F G++ +L + DG R F F F T +EA+ A+
Sbjct: 764 TKIMIRNIPFEATRSEILQLFGTFGQLKKVRLPKKFDGTHRGFGFCEFLTRKEAQNAMAT 823
Query: 61 FNKSYL 66
++++L
Sbjct: 824 LSRTHL 829
>gi|308491929|ref|XP_003108155.1| CRE-RBD-1 protein [Caenorhabditis remanei]
gi|308249003|gb|EFO92955.1| CRE-RBD-1 protein [Caenorhabditis remanei]
Length = 888
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 170/511 (33%), Positives = 267/511 (52%), Gaps = 84/511 (16%)
Query: 291 VQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIP 350
V++++LE+GRLF+RNLPY ED+L+ F K+G VSEV +V+DK T KG A V + P
Sbjct: 281 VREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGSCKGFAIVEFVFP 340
Query: 351 ESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS-------------QGTKTL 397
E+A A LD +F+GR++H++ K+ +E + + K
Sbjct: 341 EAAVAAYSALDGYVFKGRMMHIIAGDEKRDKPTEEDAETVPDDPDNPMKATDKKEKKKKT 400
Query: 398 KQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLA-VRIAL 456
+ ++++K ++A +WN+LF+ + + + +A++ V KSDLL + + A VR+AL
Sbjct: 401 FKEEKQDQKKADAGKTAHSWNALFLGANAIADTLAQRLNVKKSDLLTSDQGESAGVRLAL 460
Query: 457 GETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFG 516
ET+++ ET+ GV L+ FS KRS+ V + KNLP EL +MF
Sbjct: 461 AETRLVRETRDFFLENGVK---LDAFS---KPAEKRSDTVMIAKNLPSGVETEELKRMFE 514
Query: 517 KFGSLDKVILPSTKTL-ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQS-S 574
KFG KV++P+ + ALV+ PV+A AF+ LAY R++ PLYLEWAP DV+ +
Sbjct: 515 KFGDCQKVLMPAEGGVSALVIMGNPVDAKKAFRALAYSRFRSQPLYLEWAPFDVMGATVP 574
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQ--------LEGVT---------------------- 604
+++ ++K D +KR + ++ +G+T
Sbjct: 575 STETSEKTDDSTKPKKSKREMTYEEKKKERKNRQQGITEEEEEKVEKKSDEEEVEVPEDK 634
Query: 605 ---DADIDPDR-------VESRS-LFVKNLNFKTCDENL----RKHFGEHIKEGRILSVK 649
++ P + +ES S +FVKNL F T D L RK +G+ +K S +
Sbjct: 635 KPESSETKPKKSKQPEKEIESGSTIFVKNLAFDTTDYGLETLFRKRYGDLLK-----SAQ 689
Query: 650 VKKHLKNG---KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH-------A 699
+ K L K +SMGFGF++F + A +++QG +LDGH+L L++ H A
Sbjct: 690 ISKKLNPAEPTKPLSMGFGFVQFYTAFDAKTALKEMQGELLDGHSLELKISHREVVDKGA 749
Query: 700 KKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
K + V KK + + TKLLVRN+ FEA K
Sbjct: 750 LKRKDVQKKDQGE--CTKLLVRNLPFEASIK 778
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 60/92 (65%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ VKNLP TE +LR FF + G+I+DA L TK+GK R FAF+GF E A AI
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGKISDASLKYTKEGKFRGFAFVGFLDEGSASNAIAK 62
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
N+++ ++ R++ E R GD N PR WS+Y+
Sbjct: 63 SNQTFFNSKRLTVEECRPFGDANKPRAWSKYA 94
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL V+NLP T TE +LR+ F K+G +S+ + K+ K +G A+V + SAS AI
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGKISDASLKYTKEGK-FRGFAFVGFLDEGSASNAIAK 62
Query: 360 LDNSIFQGRLLHVMPAR 376
+ + F + L V R
Sbjct: 63 SNQTFFNSKRLTVEECR 79
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 277 EIVDPGNPSSSSKDVQQ-EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKD 335
E+VD G + KDVQ+ + E +L VRNLP+ A+ E+ F FG V + I
Sbjct: 743 EVVDKG--ALKRKDVQKKDQGECTKLLVRNLPFEASIKEVETLFETFGAVKTIRIPRKPG 800
Query: 336 TKRS-KGIAYVLYAIPESASRAIEVLDNSI-FQGRLL 370
K+ +G +V + + A RA + L +S GR L
Sbjct: 801 QKQQHRGFGFVDFISADEARRAFDALVHSTHLYGRRL 837
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPST-------KTLALVVFLEPVEAAAAFKG 549
LV+NLP+++S E+ +F FG++ + +P + V F+ EA AF
Sbjct: 766 LLVRNLPFEASIKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDFISADEARRAFDA 825
Query: 550 LAYKRY-KGVPLYLEWAPSD 568
L + + G L LEWA D
Sbjct: 826 LVHSTHLYGRRLVLEWAKED 845
>gi|38567159|emb|CAE76453.1| related to MRD1 [Neurospora crassa]
Length = 790
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 226/769 (29%), Positives = 355/769 (46%), Gaps = 131/769 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI VKNLP +TE R FS +G ++TD KL+ +R F+G+++ ++A A+K
Sbjct: 5 SRIFVKNLPPTITEAEFRKHFSAEGRQVTDVKLI-----PARHIGFVGYKSAEDAARAVK 59
Query: 60 YFNKSYLDTCRISCEIARKVGD--PNMPRPWSRYS-----------LKKEKEVSEDEKNP 106
YFN+S++ RIS +IA+ + D P P S L +V+
Sbjct: 60 YFNRSFIRMSRISVDIAKPIADSKPQHKSPSKGSSKDADPKNAPKVLPPNTKVTAAAVPK 119
Query: 107 VLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENIS 166
V AA K+ ++ V + DP+L E+L VM KM + L V E ++
Sbjct: 120 VEAAPDAPKRKLD-VLDEADPKLQEYLDVMGAHPSKKMRNAEGL-------PTTVDEVLA 171
Query: 167 QAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESE 226
A+ G + + + D + +++ AD+ M D S SES
Sbjct: 172 PAVPAGLED------GESDDEYEDIPSRTHNQSHTADQEMVDAPLAAS-----AEPSESA 220
Query: 227 DDSAGDDDDDD----------DGEEEEEE----ENDHNGDSNEECDSIIKDSIHSGVGEE 272
+ D DDD D + E+ +G + S ++ S EE
Sbjct: 221 PPVSLDATDDDWLRSRTNRLLDLVDPEDAAFALRPAASGSAAVSVPSTSVENTASAKPEE 280
Query: 273 DANGEIVDPGNPSSSSKDVQQEVLE-SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
+ + S+ + ++E + RLF+RNL YT TED++REHF+KFG + EVH+
Sbjct: 281 HPAEDSREMAATSTHDPESAISLIEKTSRLFLRNLSYTVTEDDVREHFAKFGILVEVHVP 340
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+D SKG A + Y P SA A + D ++FQGR++H++PA K+ + E S
Sbjct: 341 LDSK-GHSKGFAMIRYEKPASALAAFQT-DGTVFQGRIVHILPAAAKRENKLDEFALS-- 396
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLA 451
K ++++ RK +EA+ +T WNSLFM D V +A + GVSK++LLD A
Sbjct: 397 ---KLPLKKQQLLRKKAEAASSTFNWNSLFMSQDAVNTAMAERLGVSKAELLDPTDACTA 453
Query: 452 VRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGEL 511
V+ A+ ET VI E K+ GVN+ + KT +R + LVKN+ + E EL
Sbjct: 454 VKQAVAETTVIQEAKQYFAANGVNIEAF------KTQ--QRGDTTILVKNIKNTTIE-EL 504
Query: 512 AKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS 571
+F + G++ +V++P + T+A+V F +PV+ AF AY R+K L+LE
Sbjct: 505 RTLFEEHGTVLRVLMPPSGTIAIVQFAQPVQCRTAFARKAYSRFKDSVLFLE-------- 556
Query: 572 QSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDEN 631
KG + + ++ + L L G+TDA FK D
Sbjct: 557 -----KGPKVSLPIMWLYP-----LMLVLPGLTDA------------------FKHLDG- 587
Query: 632 LRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILD 688
+ KVK K G+ +SMGFGF+ F + + A + + G +LD
Sbjct: 588 -------------FVQAKVKTKTDPKKPGQVLSMGFGFVAFRTKDQAQAALKVMDGQVLD 634
Query: 689 GHALILQLCH-------AKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
H + ++ H ++ E + KKA TKL+V+N+ FE +K
Sbjct: 635 AHKISVKASHRGLDAAEERRREDMAKKAA--NQGTKLVVKNLPFEVTKK 681
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFG-NVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
S R+FV+NLP T TE E R+HFS G V++V ++ ++ I +V Y E A+RA
Sbjct: 4 SSRIFVKNLPPTITEAEFRKHFSAEGRQVTDVKLI------PARHIGFVGYKSAEDAARA 57
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGT 394
++ + S + + V A K +D + H S S+G+
Sbjct: 58 VKYFNRSFIRMSRISVDIA--KPIADSKPQHKSPSKGS 93
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKNLP VT+ +R FS G++ ++ + + SR FAF F T +EA A
Sbjct: 667 TKLVVKNLPFEVTKKEVRTLFSAYGKLVALRIPKKFNQSSRGFAFAEFSTAKEALNAFNS 726
Query: 61 FNKSYLDTCRISCEIAR 77
+++ R+ + A+
Sbjct: 727 LKDTHILGRRLVIDFAQ 743
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
L VKNL F+ + +R F + G+++++++ K S GF F EF + + A N
Sbjct: 669 LVVKNLPFEVTKKEVRTLFSAY---GKLVALRIPKKFNQS---SRGFAFAEFSTAKEALN 722
Query: 678 VCRDLQGTILDGHALILQLCHA 699
L+ T + G L++ A
Sbjct: 723 AFNSLKDTHILGRRLVIDFAQA 744
>gi|294944087|ref|XP_002784080.1| RNA-binding domain protein, putative [Perkinsus marinus ATCC 50983]
gi|239897114|gb|EER15876.1| RNA-binding domain protein, putative [Perkinsus marinus ATCC 50983]
Length = 849
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 166/503 (33%), Positives = 261/503 (51%), Gaps = 81/503 (16%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
++++ RL + NLPY ATED++++ F KFG++ +V ++ D+D+K+S+G+AYV Y PE A
Sbjct: 259 LMDTARLLLVNLPYIATEDDIKKAFQKFGSIEDVVVLRDEDSKKSRGMAYVTYLFPEHAV 318
Query: 355 RAIEVLDNSIFQGRLLHV--MPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG 412
RA + +FQGR+L + AR KK ++ E S Q + LK+RRE +
Sbjct: 319 RAKAEMHGKVFQGRVLRIKAAQARPKKHVERDEKRLSRKQ--EQLKKRRE--------NA 368
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNA 472
WN LF+ ++ V A K G++K+D++D EA+DLAVR A+GET+V+ E K+ L
Sbjct: 369 EQHTWNLLFVSANSAVTAAASKLGLNKADVMDVEADDLAVRAAVGETEVVREVKQWLKEE 428
Query: 473 GVNVSSLEE----------------------FSAGKTDGLKRSNHVFLVKNLPYDS-SEG 509
V V + E + G+ L RS ++K+LP +S +
Sbjct: 429 RVRVDAFERKGTSLLTSKATTYDAESPKPKGTNKGEKPQLSRSKDTLILKHLPAESVTLA 488
Query: 510 ELAKMFGKF---------GSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPL 560
EL + GK+ +L K++L T+T+A+ F++ A AFK L+Y+R+K PL
Sbjct: 489 ELRAVIGKYVSAAKDSEHSALQKLLLAPTRTVAIAQFVDQKTAQHAFKKLSYRRFKNAPL 548
Query: 561 YLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADID----------- 609
Y+EWAP ++ S KG + E + + +EGV ++
Sbjct: 549 YVEWAPENIFEPKSEQKGV--GEETRDEREEAEEEVSTPMEGVEHETVEVQEQPRSASKE 606
Query: 610 -------------PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKN 656
D S S+FVK L+F T +E LR+HF + + G I +K + +
Sbjct: 607 EEEEAVQEEEEEEEDGAGSVSVFVKGLSFDTTEETLREHFKK--QAGYIKCSISRKTMPD 664
Query: 657 GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL---------CHAKKDEQVVK 707
G+ +SMGFGF+EF + + A + LQG+ LDG L LQ+ +K + V
Sbjct: 665 GRQLSMGFGFVEFKNHKAAKECIKRLQGSSLDGRTLELQIGRGGKAGGGSQSKIGQAGVT 724
Query: 708 KAEKDKSSTKLLVRNVAFEAQRK 730
KA+ ++ +L VRNVAFEA R+
Sbjct: 725 KADTKGATNRLCVRNVAFEASRR 747
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 67/92 (72%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLPK+V RL++FF+ GE+TDA++++TKDG+SR F F+GFR+ EA++A++
Sbjct: 9 SRVIVKNLPKHVDNARLKEFFAAHGEVTDARVIKTKDGRSRCFGFVGFRSPAEAKKALRA 68
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
+ +++DT R+ +A +PR WS+YS
Sbjct: 69 VDNTFMDTSRLQVAMALAAHSTRLPRAWSKYS 100
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ RL VRN+ + A+ ++R+ FS +GNV V + + D +G A+V + A A+
Sbjct: 732 TNRLCVRNVAFEASRRDIRKLFSTYGNVVAVRMPLKVDRSGHRGFAFVEFVSRSEALAAM 791
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEA---SGNT 414
E L ++ GR L + PA H TS T LKQ ++ERK E S
Sbjct: 792 EALQHTHLYGRRLVLEPA----------AHEDTSIETAKLKQDMKDERKRHEKMNESAKR 841
Query: 415 KAWNSL 420
+ NSL
Sbjct: 842 RKINSL 847
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+S R+ V+NLP L+E F+ G V++ ++ KD RS+ +V + P A +A
Sbjct: 7 QSSRVIVKNLPKHVDNARLKEFFAAHGEVTDARVIKTKDG-RSRCFGFVGFRSPAEAKKA 65
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA 416
+ +DN+ L V A S+ + S+ T Q+ +E+ AS G K+
Sbjct: 66 LRAVDNTFMDTSRLQVAMALAAHSTRLPRAWSKYSKAT----QQSQEDLAASGVHGTGKS 121
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 37/207 (17%)
Query: 498 LVKNLPYDSSEGELAKMFGKFG-----SLDKVILPSTKTLAL----VVFLEPVEAAAAFK 548
VK L +D++E L + F K S+ + +P + L++ V F A K
Sbjct: 629 FVKGLSFDTTEETLREHFKKQAGYIKCSISRKTMPDGRQLSMGFGFVEFKNHKAAKECIK 688
Query: 549 GLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADI 608
L G L L+ S SK Q GVT AD
Sbjct: 689 RLQGSSLDGRTLELQIGRGGKAGGGSQSKIGQA--------------------GVTKADT 728
Query: 609 DPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIE 668
+ + L V+N+ F+ ++RK F + G +++V++ LK ++ GF F+E
Sbjct: 729 ---KGATNRLCVRNVAFEASRRDIRKLFSTY---GNVVAVRMP--LKVDRSGHRGFAFVE 780
Query: 669 FDSVETATNVCRDLQGTILDGHALILQ 695
F S A LQ T L G L+L+
Sbjct: 781 FVSRSEALAAMEALQHTHLYGRRLVLE 807
>gi|357616005|gb|EHJ69949.1| hypothetical protein KGM_10362 [Danaus plexippus]
Length = 888
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 156/452 (34%), Positives = 250/452 (55%), Gaps = 41/452 (9%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
ESGR+FVRNLPY +E+EL F K+G ++EV + +D ++ KG A + + +PE A +A
Sbjct: 350 ESGRIFVRNLPYVVSEEELTSLFEKYGPIAEVSMPIDPILRQPKGFAVITFVMPEHAVKA 409
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA 416
LD + F GR++H++PA+ +K ++ + + L + ++ K + + ++
Sbjct: 410 YTELDGTAFCGRMMHILPAKMEKLEEEID---------EDLPFKEKKALKLKQQAKSSHN 460
Query: 417 WNSLFMRPDTVVENIARKHGVSKSDLL--DREANDLAVRIALGETQVIAETKKALTNAGV 474
WN LF+ + + + +A + +K LL + + AVR+ALGETQ++AETK+ L + GV
Sbjct: 461 WNVLFLGANAIADVVASSYNTTKEQLLSDNNKNTSAAVRLALGETQLVAETKEFLESNGV 520
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLAL 534
++ + KRS LVKNLP + + E+ +F K G L + ++P AL
Sbjct: 521 HLDAFNR------PAKKRSKTCILVKNLPAGTDKEEIRNLFVKHGQLARFLMPRHGITAL 574
Query: 535 VVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL---SQSSTSKGNQ-----KNDAVV 586
V F+EP EA AF LAY +YK PLYLEWAP +V +++ T G + K +A
Sbjct: 575 VDFIEPFEAKKAFGKLAYSQYKSAPLYLEWAPENVFVKDAKTETVSGKETSDVNKTEAES 634
Query: 587 GEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRIL 646
G+ + + + +E ++ + D +LF+KNLNFKT +E L+ HF G++
Sbjct: 635 GDETSVKEPETKMVEEPSNEQPEND----TTLFIKNLNFKTTEETLKSHFSAC---GKVH 687
Query: 647 SVKVKKHLKNGKN----VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD 702
SV + K K+ KN +SMG+GF+++ + LQG+ LDG L L+
Sbjct: 688 SVVIAKK-KDPKNQTQLLSMGYGFVQYIKKTDTLEALKVLQGSTLDGKTLELKRSERGNI 746
Query: 703 EQV--VKKAEKD--KSSTKLLVRNVAFEAQRK 730
+V KK KD ++ TK+L+RNV F+A RK
Sbjct: 747 TEVKTSKKTSKDTIQNGTKILIRNVPFQANRK 778
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 130/252 (51%), Gaps = 35/252 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP VT ++L+D F +KGE+TD +L TKDGK R F F+G+RTE++A A ++
Sbjct: 2 SRLIVKNLPNKVTVEKLKDLFGEKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAAAAREH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS--------LKKEKEVSEDEKNPVLAAKR 112
F+ +++++ +I+ E+ +GD PR WS+Y+ L K++ + +K V A+R
Sbjct: 62 FDGTFVNSMKINVEVCANLGDEKKPRAWSKYATDSTAYKKLHKDETSVKPKKEKVNKAER 121
Query: 113 GEKKTIEKVTEN-DDPQLLEFLQVMQPRVKSKM-WANDTLIGLMADQKAKVSENISQAIK 170
+ K E + ++ DDP EF++ V K W + L E+ + +
Sbjct: 122 NKNKIKELLKKHKDDPLFAEFIEA---HVNEKTAWIKEALDAADKSDDDSGVEDETPS-- 176
Query: 171 GGEKSITLHVKSDKSNVITDSQATEKS-------KNAAADELMSDMDYFKSRVKKDWSDS 223
K + D +A EK+ K A++ +SD++Y K +KK +
Sbjct: 177 -------------KDEKVQDDEAEEKNDIQDAPQKEKVANKQISDLEYMKLLMKKVDGYT 223
Query: 224 ESEDDSAGDDDD 235
E ++ A +DD
Sbjct: 224 EVDNKDAKPEDD 235
>gi|189197515|ref|XP_001935095.1| multiple RNA-binding domain containing protein 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981043|gb|EDU47669.1| multiple RNA-binding domain containing protein 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 825
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 157/456 (34%), Positives = 247/456 (54%), Gaps = 35/456 (7%)
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
+P ++ D + ++ E+GRL++RNL Y EDE+R K + EVH+ + K + KG
Sbjct: 288 HPVVAAPDEEDKIRETGRLYLRNLHYGEPEDEIRAAIFKACTLEEVHVPLKKADGKGKGF 347
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRRE 402
A+V +A P A A DN+IFQGRLLH++ A+ KK + E S K ++++
Sbjct: 348 AFVQFANPSDAVEAYLDNDNTIFQGRLLHIISAKAKKDTKLDEYEIS-----KLPLKKQK 402
Query: 403 EERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI 462
E RK A+ T WNSL++ D V+ IA + G+SK++LLD + D AVR A ET +I
Sbjct: 403 EIRKKQNAAKATFNWNSLYLNADAVMSTIAGRMGISKAELLDPTSADAAVRQAHAETHII 462
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
ETK GV++ + + + G + LVKN+P+ + EL K+F + G++
Sbjct: 463 QETKSYFAQHGVDLEAFQRSAKG--------DLAILVKNVPHTVTPDELRKLFEEHGTVT 514
Query: 523 KVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN 582
K ++P T A+V F +A AF L+Y++ K LYLE AP D+ +
Sbjct: 515 KFLMPPTGMTAIVEFSNVAQAKTAFMSLSYRKMKDSILYLEKAPKDLFKEG--------- 565
Query: 583 DAVVGEHDAKRALLEQQLEGVTDADI-----DPDRVESRSLFVKNLNFKTCDENLRKHFG 637
+ + + EQ + T D+ +P+ + +L+V+NLNF T E L + F
Sbjct: 566 ---IATNFVQTTFSEQPVVKPTATDLLVDAPEPEATNTATLYVRNLNFSTTTERLTEAF- 621
Query: 638 EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
+ + R +VK K K G +SMGFGF+EF++ ETAT R + G L+GH L+++
Sbjct: 622 KPLSGFRSATVKTKMDPKRGV-LSMGFGFVEFNNPETATAALRAMDGHDLEGHKLLIKAS 680
Query: 698 HAKKD---EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
H D E+ + A K +STK++++N+ FEA +K
Sbjct: 681 HKGADAAEERRNEDAAKKAASTKIIIKNLPFEASKK 716
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 84/149 (56%), Gaps = 14/149 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI V+ LP +ED +R F+ K ITD K R+ ++G++T ++A +A+KY
Sbjct: 4 SRIFVRGLPPKFSEDDVRKHFA-KFPITDVKFF-----PHRRIGYVGYKTPEDAAKAVKY 57
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEV-SEDEKNPVLAAKRGEKKTIE 119
FNK+++ +I EIAR + D +P+ SR LK EK S DE P R E
Sbjct: 58 FNKTFIKLTKIYAEIARPIADKELPK--SRRQLKLEKSAPSNDEYRP----PRQENDLKR 111
Query: 120 KVTEND-DPQLLEFLQVMQPRVKSKMWAN 147
K E + DP+L EFL+V QP K+ +WAN
Sbjct: 112 KRDEAEQDPKLKEFLEVYQPPSKTSLWAN 140
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+FVR LP +ED++R+HF+KF + D + I YV Y PE A++
Sbjct: 1 MESSRIFVRGLPPKFSEDDVRKHFAKFP-------ITDVKFFPHRRIGYVGYKTPEDAAK 53
Query: 356 AIEVLDNSIFQ 366
A++ + + +
Sbjct: 54 AVKYFNKTFIK 64
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
+ S + +KNL F+ +++R F + G++ SV+V K S GFGF EF +
Sbjct: 698 KAASTKIIIKNLPFEASKKDVRALFTPY---GQLRSVRVPKKFDAS---SRGFGFAEFTT 751
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAKKDE 703
A N L+ T L G L+L A+ D+
Sbjct: 752 KRDAVNAMNALKNTHLLGRRLVLAFAEAESDD 783
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP ++ +R F+ G++ ++ + D SR F F F T+++A A+
Sbjct: 702 TKIIIKNLPFEASKKDVRALFTPYGQLRSVRVPKKFDASSRGFGFAEFTTKRDAVNAMNA 761
Query: 61 FNKSYLDTCRISCEIARKVGD 81
++L R+ A D
Sbjct: 762 LKNTHLLGRRLVLAFAEAESD 782
>gi|119496815|ref|XP_001265181.1| pre-rRNA processing protein Mrd1, putative [Neosartorya fischeri
NRRL 181]
gi|119413343|gb|EAW23284.1| pre-rRNA processing protein Mrd1, putative [Neosartorya fischeri
NRRL 181]
Length = 825
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 245/449 (54%), Gaps = 48/449 (10%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S RLFVRNLPY A+E +L FSKFG V E+H+ D + SKG AYV Y P++A +A
Sbjct: 300 SSRLFVRNLPYDASESDLEPVFSKFGKVEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAY 359
Query: 358 EVLDNSIFQGRLLHVMPARHKKSS--DKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
+ LD FQGRL+H++PA KK+ D+ EL LK++++ +RK EAS +
Sbjct: 360 KELDGKHFQGRLMHILPAAAKKTYKIDEHELSKL------PLKKQKQIKRKL-EASSSAF 412
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVN 475
+WNSL+M D V+ ++A + GVSK+DLLD + D AV+ A ET VI ETK T GVN
Sbjct: 413 SWNSLYMNTDAVMSSVAERLGVSKADLLDPTSADAAVKQAHAETHVIQETKAYFTANGVN 472
Query: 476 VSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALV 535
+ + ++ +R N LVKN Y +L K+F +G + ++++P + T+A+V
Sbjct: 473 LDAFKQ--------RERGNTAILVKNFSYGVKVDDLRKLFEPYGQITRLLMPPSGTIAIV 524
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRAL 595
F P EA AFKGLAY++ L+LE AP+++ +S + + V
Sbjct: 525 EFARPDEAQKAFKGLAYRKVGDSILFLEKAPANLFDATSAPQTSVLETKAVS-------- 576
Query: 596 LEQQLEGVTDADI----DPDR-VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS-VK 649
+G + AD D D V + +LFVKNLNF T +E + F +G + + +K
Sbjct: 577 -----QGFSTADTFAAEDGDEPVVTSTLFVKNLNFSTTNEKFTEVFKPL--DGFVSARIK 629
Query: 650 VKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD------ 702
K K G+ +SMGFGF++F + A + G LD H L+++ + D
Sbjct: 630 TKPDPKRPGQTLSMGFGFVDFRTKAQAQAALAAMNGYKLDQHELVVRASNKAMDAAEERR 689
Query: 703 -EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
E KK + TK++++N+ F+A +K
Sbjct: 690 REDTAKKIAARR--TKIIIKNLPFQATKK 716
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV+V K + GFGF +F S A N
Sbjct: 704 IIIKNLPFQATKKDVRSLFGAY---GQLRSVRVPKKFDRS---ARGFGFADFVSAREAEN 757
Query: 678 VCRDLQGTILDGHALILQLCH--AKKDEQVVKKAEK 711
L+ T L G L+L+ + A EQ +++ EK
Sbjct: 758 AMDALKNTHLLGRRLVLEFANEEAVDPEQEIEQIEK 793
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 24/140 (17%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E+ R+FV LP T T D+LR+HF+ +++ H++ + I +V + PE+A +
Sbjct: 1 MENTRVFVSGLPPTFTNDQLRKHFASRFQITDAHVLP------KRRIGFVGFKSPEAAQQ 54
Query: 356 AIEVLDNSIFQGRLLHVMPAR-------HKKSSDKQELHNSTSQGTKTLKQRR------- 401
A + + + + V A+ K K+E ++ S LK++R
Sbjct: 55 AASYFNKTYVKMSKISVEIAKPIDSEPVKKAEKHKKESASNDSTAGNALKRKRDGDNTQQ 114
Query: 402 ----EEERKASEASGNTKAW 417
+E E NTK W
Sbjct: 115 DPQLQEYLSVIERPSNTKTW 134
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ ++ + D +R F F F + +EAE A+
Sbjct: 702 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMDA 761
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ E A
Sbjct: 762 LKNTHLLGRRLVLEFA 777
>gi|167517425|ref|XP_001743053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778152|gb|EDQ91767.1| predicted protein [Monosiga brevicollis MX1]
Length = 1117
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/282 (44%), Positives = 179/282 (63%), Gaps = 13/282 (4%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+++ ESGRLFVRNLPY EDELRE F FG +SE+H+ +D +TK+ KG A++ + +PE
Sbjct: 533 EDIGESGRLFVRNLPYACREDELRELFEAFGPLSELHMPIDGETKKPKGFAFITFVLPEH 592
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG 412
AS+A + LDN+IFQGRLLHV+PARHK +D +G+ ++++ K + +G
Sbjct: 593 ASQAFQNLDNTIFQGRLLHVLPARHKPGTDAD---FEVEEGSNY---KKDKATKQKQKAG 646
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN-DLAVRIALGETQVIAETKKALTN 471
+ W++LF+R D V E +A + GVSK +L+D LAVR+ALGE+ +IAE K+ L
Sbjct: 647 DAYNWSTLFLRQDAVAEAMADEFGVSKGELMDDSGEASLAVRMALGESNIIAENKRFLEE 706
Query: 472 AGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT 531
GV +S+ + T KRS LVKNLP+ + E L +F G L ++P ++T
Sbjct: 707 HGVKLSAFD------TRIGKRSTTTLLVKNLPFAAEEKTLRPLFEAHGDLSNFVMPPSRT 760
Query: 532 LALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQS 573
+ALV ++EP EA F+ LAY++YK PLYLEWAP S
Sbjct: 761 MALVEYMEPSEARRGFRKLAYRKYKDEPLYLEWAPKQCFVDS 802
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VKNLPK++ E RLR+ F++ GE+T KL+ R+ A+IGF+ A A+
Sbjct: 15 SRIIVKNLPKHIQEPRLRELFAKYGELTQVKLL-----SKRRMAYIGFKDVDSATAAVSK 69
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
N ++DT +I A VGD +PRPWS+ S
Sbjct: 70 ENDVFVDTSKIEVAHALAVGDQRLPRPWSKQS 101
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 15/125 (12%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDS 671
S S+FVKNL+F T ++ LR HF E I G I SV+V + + + +SMGFGF+E+ S
Sbjct: 901 SSSVFVKNLHFDTDEDALRHHF-EGI--GPIRSVRVARKPNPKEPSRPLSMGFGFVEYKS 957
Query: 672 VETATNVCRDLQGTILDGHALILQLCH------AKKDEQVVKKAEKDKSSTKLLVRNVAF 725
+ A + L G+ L H L L++ K++ Q K K S KL+VRN+AF
Sbjct: 958 RQDAVRAIKMLHGSSLQEHTLELKMSERTGAPLTKRERQGKKMKAK---SNKLVVRNIAF 1014
Query: 726 EAQRK 730
EA K
Sbjct: 1015 EATPK 1019
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIK 59
+++ V+N+ T ++ FS G I +L R + DG R FAFI F T+QEA +A
Sbjct: 1005 NKLVVRNIAFEATPKEVQQLFSPHGNIVSVRLPRKQYDGTHRGFAFIEFSTKQEARDAFS 1064
Query: 60 YFNKSYLDTCRISCEIA 76
+ ++L R++ E A
Sbjct: 1065 ALSGTHLYGRRLAMEFA 1081
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 18/105 (17%)
Query: 273 DANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVV 332
D E VD PSSS +FV+NL + ED LR HF G + V +
Sbjct: 889 DEGAEEVDTSGPSSS-------------VFVKNLHFDTDEDALRHHFEGIGPIRSVRVAR 935
Query: 333 DKDTKR-----SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
+ K S G +V Y + A RAI++L S Q L +
Sbjct: 936 KPNPKEPSRPLSMGFGFVEYKSRQDAVRAIKMLHGSSLQEHTLEL 980
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
+ +S L V+N+ F+ + +++ F H G I+SV++ + +G + GF FIEF +
Sbjct: 1001 KAKSNKLVVRNIAFEATPKEVQQLFSPH---GNIVSVRLPRKQYDGTH--RGFAFIEFST 1055
Query: 672 VETATNVCRDLQGTILDGHALILQLC 697
+ A + L GT L G L ++
Sbjct: 1056 KQEARDAFSALSGTHLYGRRLAMEFA 1081
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRN+ + AT E+++ FS GN+ V + + +G A++ ++ + A A
Sbjct: 1004 SNKLVVRNIAFEATPKEVQQLFSPHGNIVSVRLPRKQYDGTHRGFAFIEFSTKQEARDAF 1063
Query: 358 EVLDNSIFQGRLL 370
L + GR L
Sbjct: 1064 SALSGTHLYGRRL 1076
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK------SRQFAFIGFRTEQEA 54
S + VKNL ED LR F G I ++ R + K S F F+ +++ Q+A
Sbjct: 902 SSVFVKNLHFDTDEDALRHHFEGIGPIRSVRVARKPNPKEPSRPLSMGFGFVEYKSRQDA 961
Query: 55 EEAIKYFNKSYLDTCRISCEIARKVGDP 82
AIK + S L + +++ + G P
Sbjct: 962 VRAIKMLHGSSLQEHTLELKMSERTGAP 989
>gi|195439120|ref|XP_002067479.1| GK16446 [Drosophila willistoni]
gi|194163564|gb|EDW78465.1| GK16446 [Drosophila willistoni]
Length = 929
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 260/456 (57%), Gaps = 42/456 (9%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ ESGR+F RNL YT TE +L++ F +FG V E+++ VDK T++ KG V Y +PE A
Sbjct: 373 ISESGRIFFRNLAYTITETDLQKLFEQFGPVVEINLPVDKITRKIKGFGTVTYMMPEHAL 432
Query: 355 RAIEVLDNSIFQGRLLHVMPARH-KKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
+A LD S F GRLLH++P + K DK+++ + + + K+ + ++ A + G
Sbjct: 433 KAFNSLDGSDFHGRLLHLLPGKELDKDGDKEDMDENDASLSFKQKKALKLKKSAQKPIG- 491
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLD--REANDLAVRIALGETQVIAETKKALTN 471
WN+LF+ + V + +A++ SK +LD + + AVR+ALGETQ++ E K+ L
Sbjct: 492 ---WNTLFLGANAVADILAKQFKTSKEHILDTSQGGSSAAVRLALGETQIVMEMKQFLEQ 548
Query: 472 AGVNVSSLEEFSAGKTDGL--KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST 529
GV +S+ DG+ KRS V + KNLP + EL+ +F ++G + +++LP +
Sbjct: 549 EGVRLSAF--------DGVNQKRSKTVIVAKNLPAGTEVSELSPVFSRYGPIGRIVLPPS 600
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH 589
AL+ + + EA AFK LAY ++K PL+LEWAP + + S + E
Sbjct: 601 GVTALIEYCDASEARQAFKKLAYSKFKDAPLFLEWAPDETFTVSLNGEAIIPKSEPKLEP 660
Query: 590 DAKRALLEQQLEGVT-DADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSV 648
+ + A + + E V DAD +P+ ++F++NLNFKT E + +HF H+ G I +V
Sbjct: 661 EPEPAKGKGKTEPVAEDADDEPE--PETTIFLRNLNFKTVQETVWEHF-RHL--GTIHTV 715
Query: 649 KVKKHL--KNGKN-VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQV 705
++ + +N ++ S+G+GFI+F A N +++Q T +DG+++ L K+ ++V
Sbjct: 716 EIARRADPQNPRHSTSLGYGFIQFKKHSVAENALKNMQMTTIDGNSVEL-----KRSDRV 770
Query: 706 VKKAE-----------KDKSSTKLLVRNVAFEAQRK 730
+K E K ++ TK+LVRN+ F+AQ +
Sbjct: 771 LKTQEQESSRRRQGSQKKQTGTKILVRNIPFQAQYR 806
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 97/162 (59%), Gaps = 16/162 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VK+LPK++TE++LR+ F KG ITD +L T DGK RQF FIG+ +E+EA+ AIK+
Sbjct: 2 SRIIVKHLPKHITEEKLRNIFGTKGVITDLQLKYTVDGKFRQFGFIGYSSEEEAQAAIKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS--LKKEKEVSEDEKNPVLAA-------- 110
F+ + + T R+ E +G P+ WS+Y+ KK ++++ EK +AA
Sbjct: 62 FHNTCIQTSRVHVESCAALGSEEKPQSWSKYAKDSKKNLDIAKAEKEKEIAADKLKAKEK 121
Query: 111 --KRGEKKTIEKVT--ENDDPQLLEFLQVMQPRVKSKMWAND 148
K ++ ++++ DDP EF+Q + +S +WAND
Sbjct: 122 KTKEKKRNKVDEILGEHKDDPAFQEFMQA-HDKTRS-LWAND 161
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 285 SSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHI----VVDKDTKRSK 340
SS + Q+ ++ VRN+P+ A E+R+ F FG ++ + I +D R
Sbjct: 778 SSRRRQGSQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELTSLRIPKKMAPGEDAHR-- 835
Query: 341 GIAYVLYAIPESASRAIEVLDNSI-FQGRLLHVMPARHKKSSDKQELHNSTS 391
G +V + A RA + L S GR L + A H++ D +EL T+
Sbjct: 836 GFGFVDFVTKADAKRAFDALSASTHLYGRRLVLEWATHEEHDDVEELRKRTA 887
>gi|312091340|ref|XP_003146943.1| hypothetical protein LOAG_11374 [Loa loa]
Length = 620
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 179/591 (30%), Positives = 291/591 (49%), Gaps = 76/591 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LP TE++LRD F G ITD L T DGK R+FAF+GF T+ A++A +
Sbjct: 2 SRLIVKGLPSNCTEEKLRDHFGSFGTITDCSLKYTIDGKFRRFAFVGFETDGNAQKAREN 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS-----LKKEKEVSEDEKNPVLAAKRGEK 115
+ +++ R++ E + GD PR WS+Y+ K+ E+EK + + +
Sbjct: 62 LHNTFMGASRLTVEECKPFGDDTKPRAWSKYAKGSSAYKRLHPEEEEEKTKEIVSVKDSS 121
Query: 116 KTIEKVTENDDPQLLEFLQVMQ--PRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
+ +K+ +D + +F+QV + P S + LM + + +S N S ++
Sbjct: 122 PSPKKMRNENDEEFHDFIQVQKGAPPTASSSNDESSNNSLMEELLSGISGNTSLSL---- 177
Query: 174 KSITLHVKSDKSNVITDSQATEKSKNA----AADELMSDMDYFK-SRVKKD-------WS 221
I+ ++ K+ I D + K K + E ++ + +F+ S V+K +
Sbjct: 178 -IISGFPRTVKAKGIKDWFSPIKLKGIKISRGSTEAIAFVTFFQQSDVRKALRRNGQFFG 236
Query: 222 DSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDP 281
S+ E + DDG E D IH E + +
Sbjct: 237 GSKLEVTKVSSNRVSDDGME---------------------DYIHK-TREAEVEASVA-- 272
Query: 282 GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
++LE+GRLFVRNLPY ++++LR F K+G +S++ +++ K T + KG
Sbjct: 273 ------------KILETGRLFVRNLPYVCSDEDLRYLFKKYGEISDLQVIISKKTGQCKG 320
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHN-STSQGTKTLKQR 400
A V Y PESA A LD SI +GR+LH++P K+ ++ + S Q K K +
Sbjct: 321 FAIVTYVFPESAVAAFSALDGSILKGRMLHILPGEEKREVEETGITGKSAFQKAKFAKLK 380
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN-DLAVRIALGET 459
++ +G + +WN+LF+ + V E +A K V KSDLL + VR+AL ET
Sbjct: 381 KD--------AGKSHSWNTLFLGANAVAETLAEKLDVEKSDLLLGQGEIGPGVRLALAET 432
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
+++ ET++ L GV L+ FS KRSN V ++KNL EL +MF + G
Sbjct: 433 RLVNETREYLLANGV---CLDVFS---RPAAKRSNTVIIIKNLTTKVDIDELKRMFARHG 486
Query: 520 SLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
+ ++++P A++ ++A AF LAY R++ PL+LEWAP D+
Sbjct: 487 PVKQLLMPPGGITAILEMENSIDAQKAFSTLAYTRFRSQPLFLEWAPYDLF 537
>gi|403165616|ref|XP_003325592.2| hypothetical protein PGTG_07425 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165799|gb|EFP81173.2| hypothetical protein PGTG_07425 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 759
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 202/705 (28%), Positives = 359/705 (50%), Gaps = 73/705 (10%)
Query: 43 FAFIGFRTEQEAEEAIKYFNKSYLDT-------CRISCEIARKVGDPNMPRPWSRYSLKK 95
AF+G++++++A + ++D RIS E A+ + + K
Sbjct: 1 MAFVGYKSQEQAAWIKDVWEGVWVDGRSGRGTGSRISVEWAKGIEE-----------CGK 49
Query: 96 EKEVSEDEKNPVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTL-IGLM 154
+ V ++ + K+ K +E + D Q EF+ + PR K+K ++ + + +
Sbjct: 50 TRGVPQNTTSTNSPPKK--KTKLEPPEKPQDSQFAEFMSLSNPR-KNKSLVHEIMELAVP 106
Query: 155 ADQKAKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKS 214
Q+ + N + + IT + + + + S+++ DE ++D +Y
Sbjct: 107 TPQQPEPQSN-KATVPHLQSEITTTEEPNLPPIESSSRSSSPPPVIGDDEDITDKEYLAR 165
Query: 215 RVKKDWSDS-ESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEED 273
R+K+ +D+ E + + + + E++ E D N S ++ +I +D
Sbjct: 166 RMKRKLTDTVELQPELEKTSPESKEWEQDVGENGDKNEPSVDQQANI----------PDD 215
Query: 274 ANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD 333
+ + +P PS + +LESGRLF+RNL ++ TE+E+R F FGNV++VHI++D
Sbjct: 216 LSSKPPEPVVPSDEAT-----ILESGRLFLRNLAFSVTEEEIRAIFEPFGNVAQVHILLD 270
Query: 334 KDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQG 393
+ ++ KG+ YV Y+ A A LD S FQGRLLH++PA + + + E S S+
Sbjct: 271 NE-RKPKGLGYVSYSRSSDALEAYRKLDQSDFQGRLLHILPAVTR--NPRGESSTSASKA 327
Query: 394 TKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVR 453
T+K ++ +RK S W +L+M D V ++A + +SK++L + +A + AV+
Sbjct: 328 HNTVKMEQDAKRKLE--SSKQFNWATLYMNSDAVASSVADRLKISKAELFNPDAQNPAVK 385
Query: 454 IALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAK 513
+AL ET VI ETK+ L + G++V + E+ + RS LVKN+PY++S +
Sbjct: 386 LALAETHVINETKQFLEDNGIDVEAFEKLKSA------RSPTTILVKNIPYNTSTNVIKA 439
Query: 514 MFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQS 573
+F + GS+ KV++P + T+A+V + + +AF+ L+YKR LYLE AP D L +
Sbjct: 440 LFSEHGSVLKVLMPPSGTIAVVEMGDKQDTKSAFRSLSYKRIGNSVLYLEKAPLD-LWKI 498
Query: 574 STSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLR 633
+K + + AK + E++ G +P +LFVKNL+F T + L
Sbjct: 499 DPAKPEVATPQEISQ--AKPSSKEEKESG------EP----GSTLFVKNLSFGTTSDALA 546
Query: 634 KHFGEHIKEGRILS-VKVKKHLKNGKN-VSMGFGFIEFDSVETATNVCRDLQGTILDGHA 691
F G + S ++ K KN ++ +SMGFGF+ F +V++A + +QG LDGH
Sbjct: 547 SRFSNLT--GYLFSRIQTKPDPKNAEHRLSMGFGFVGFRTVDSAQQALQRMQGCYLDGHT 604
Query: 692 LILQLCHAKKDEQVVKK----AEKDK--SSTKLLVRNVAFEAQRK 730
L L+ ++E+ ++ EK K ++ KLL++N+ FE +K
Sbjct: 605 LELKFAKRGREEEEKEEKALDGEKGKKTATNKLLIKNLPFEINKK 649
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ +KNLP + + L + F G++ +L + D KSR F F+ + T++EA+EA+K
Sbjct: 635 NKLLIKNLPFEINKKELYELFGVYGKLKSIRLPKKLDRKSRGFGFVEYHTKKEAQEALKS 694
Query: 61 FNKSYLDTCRISCEIA 76
S+L + E A
Sbjct: 695 LKFSHLLGRHLVIEYA 710
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 489 GLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEA 543
G K + + L+KNLP++ ++ EL ++FG +G L + LP ++ V + EA
Sbjct: 629 GKKTATNKLLIKNLPFEINKKELYELFGVYGKLKSIRLPKKLDRKSRGFGFVEYHTKKEA 688
Query: 544 AAAFKGLAYKRYKGVPLYLEWA 565
A K L + G L +E+A
Sbjct: 689 QEALKSLKFSHLLGRHLVIEYA 710
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ +L ++NLP+ + EL E F +G + + + D ++S+G +V Y + A A+
Sbjct: 634 TNKLLIKNLPFEINKKELYELFGVYGKLKSIRLPKKLD-RKSRGFGFVEYHTKKEAQEAL 692
Query: 358 EVLDNSIFQGRLLHVMPARHKKSS-DKQELHNSTS 391
+ L S GR L + A S+ D L NS S
Sbjct: 693 KSLKFSHLLGRHLVIEYANDADSTLDLDHLRNSQS 727
>gi|388582417|gb|EIM22722.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 725
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 154/447 (34%), Positives = 249/447 (55%), Gaps = 34/447 (7%)
Query: 290 DVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAI 349
+V +V+E+ R+F+RNLP++ TED+L+ FSK+G V++ H+ + D+K G+AY+ +A
Sbjct: 203 EVIDQVMETARIFLRNLPFSCTEDDLKTEFSKYGVVNQAHVPLSNDSKTPMGVAYISFAS 262
Query: 350 PESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASE 409
P +A A D SIFQGRLLHV+PA +K+ Q+L + + K+ R ++RK
Sbjct: 263 PNAAVAAFRAADGSIFQGRLLHVLPAVNKRPP--QDLSKA------SFKKLRNKDRKEG- 313
Query: 410 ASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE-ANDLAVRIALGETQVIAETKKA 468
A +W+ L+M D VV ++A + V K+++L + +++ AV++AL ET VI ETK
Sbjct: 314 AESREFSWSGLYMNADAVVSSLAARLNVEKAEILSSDSSSNPAVKVALAETHVINETKGF 373
Query: 469 LTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS 528
L GVN+ + + G R + L+KN+P+ +S +L +MF G + +++LP
Sbjct: 374 LKEQGVNLDAFSPENRG-----PRLENTLLIKNIPFGTSVDDLDEMFRPCGEISRLLLPP 428
Query: 529 TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTS----KGNQKNDA 584
T+A++ +L P +A AFK LAYKR LYLE AP+ + ++ + S G K
Sbjct: 429 AGTIAIIEYLLPNDARTAFKKLAYKRVGNSVLYLEKAPNGMWAKDAPSGAIAAGGPKPVE 488
Query: 585 VVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGR 644
VV + E TD + + +LF+KN+ F T + L F + R
Sbjct: 489 VVDK------------ETPTDKVAAGEEEAASTLFIKNIAFSTPEAKLASIFSS-LSGYR 535
Query: 645 ILSVKVKKHLKNGKN-VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDE 703
++ K K+ N +SMG+GF+ FD+ E A + +Q +LDGH+L ++ KD
Sbjct: 536 YARIQTKPDPKSAANRLSMGYGFVGFDNEEHAKDALASMQKYVLDGHSLQVKFAQRGKDS 595
Query: 704 QVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ + K +TK+LV+NV FEA +K
Sbjct: 596 EPGAAMGQTK-TTKMLVKNVPFEASKK 621
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 8/83 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE-ITDAKLM-------RTKDGKSRQFAFIGFRTEQ 52
SR+ VK LP + LR F +G ITDAK++ T GKSR F F+GF++ +
Sbjct: 2 SRLIVKGLPTTADNNALRTHFGSRGATITDAKVVFKKGTAVGTSKGKSRGFGFVGFKSPE 61
Query: 53 EAEEAIKYFNKSYLDTCRISCEI 75
EA+EA+ +FNK+Y T ++ EI
Sbjct: 62 EAKEALHFFNKTYWGTSKLEIEI 84
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 130/296 (43%), Gaps = 41/296 (13%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L ++N+P+ + D+L E F G +S + + + IA + Y +P A A + L
Sbjct: 397 LLIKNIPFGTSVDDLDEMFRPCGEISRLLL------PPAGTIAIIEYLLPNDARTAFKKL 450
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+L++ A + + + G K ++ +E A+G +A ++L
Sbjct: 451 AYKRVGNSVLYLEKAPNGMWAKDAPSGAIAAGGPKPVEVVDKETPTDKVAAGEEEAASTL 510
Query: 421 FMR------PDTVVENI-ARKHGVSKSDLLDR-EANDLAVRIALGETQVIAETKKALTNA 472
F++ P+ + +I + G + + + + A R+++G V + ++ +A
Sbjct: 511 FIKNIAFSTPEAKLASIFSSLSGYRYARIQTKPDPKSAANRLSMGYGFVGFDNEEHAKDA 570
Query: 473 GVNVSSLEEF------------------SAGKTDGLKRSNHVFLVKNLPYDSSEGELAKM 514
++S++++ G G ++ + LVKN+P+++S+ ++ ++
Sbjct: 571 ---LASMQKYVLDGHSLQVKFAQRGKDSEPGAAMGQTKTTKM-LVKNVPFEASKKDIREL 626
Query: 515 FGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
FG G L V LP T+ A + F+ +A A++ L + G L L+WA
Sbjct: 627 FGMHGQLKSVRLPRKFDRKTRGFAFLDFVTRRDAEIAYESLKHTHLLGRHLVLQWA 682
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P ++ +R+ F G++ +L R D K+R FAF+ F T ++AE A +
Sbjct: 607 TKMLVKNVPFEASKKDIRELFGMHGQLKSVRLPRKFDRKTRGFAFLDFVTRRDAEIAYES 666
Query: 61 FNKSYL 66
++L
Sbjct: 667 LKHTHL 672
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 34/268 (12%)
Query: 300 RLFVRNLPYTATEDELREHF-SKFGNVSEVHIVVDKDTK------RSKGIAYVLYAIPES 352
RL V+ LP TA + LR HF S+ +++ +V K T +S+G +V + PE
Sbjct: 3 RLIVKGLPTTADNNALRTHFGSRGATITDAKVVFKKGTAVGTSKGKSRGFGFVGFKSPEE 62
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLK-QRREEERKASEAS 411
A A+ + + + L + KS +Q Q K LK +RR +E K S++
Sbjct: 63 AKEALHFFNKTYWGTSKLEIEIVEDNKSIQEQ------LQDGKALKAKRRRKEGKESDSE 116
Query: 412 GNTKAWNSLFMRPDTV-------VENIARKHGVSKSDLLD--REANDL-AVRIALGETQV 461
++P + +N A K+ S+ + D E +DL +R + +
Sbjct: 117 EEESNKRVKVLKPVHLKAIEMQKAKNKATKNSDSEQEGGDDNTEMSDLEYMRAKMKRRHI 176
Query: 462 IAETKKAL---TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKF 518
ET +A T + A D + + +FL +NLP+ +E +L F K+
Sbjct: 177 PEETDEAPKEETPQETTQDAEARKQAEVIDQVMETARIFL-RNLPFSCTEDDLKTEFSKY 235
Query: 519 GSLDKVILP---STKT---LALVVFLEP 540
G +++ +P +KT +A + F P
Sbjct: 236 GVVNQAHVPLSNDSKTPMGVAYISFASP 263
>gi|401888739|gb|EJT52690.1| rRNA primary transcript binding protein [Trichosporon asahii var.
asahii CBS 2479]
Length = 1040
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 167/481 (34%), Positives = 250/481 (51%), Gaps = 50/481 (10%)
Query: 270 GEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVH 329
G+ED N VDP +D +L +GRLFVRNL + AT D+++ HF KFG + +VH
Sbjct: 476 GDEDPN---VDP-------EDAM--ILSTGRLFVRNLAFVATADDIKAHFEKFGPIVDVH 523
Query: 330 IVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQ----- 384
+ V T G A+VL+ P +A A + LD + FQGRLLHV+P R + +
Sbjct: 524 MPVSHSTGEPLGTAFVLFRDPNNALSARQSLDKTTFQGRLLHVLPGRARPGQENASGVAG 583
Query: 385 ----ELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKS 440
++ ++ +KQR++E+RKA A G W +L+M D V ++A++ GVSKS
Sbjct: 584 IIDGKVLGKATEARGEVKQRQDEKRKADSARGVN--WATLYMNADAVAASVAKRMGVSKS 641
Query: 441 DLLDREANDL--AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFL 498
+LLD ++D+ AV++AL ETQVIAETK N G+ + SL+ + RS L
Sbjct: 642 ELLD-GSDDMSPAVKLALAETQVIAETKAHFENEGIVLDSLQP-------RVPRSQTTIL 693
Query: 499 VKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGV 558
VKN+P+ ++ +L +F G L +V+LP T+ +V F+ ++A AFK LAY+R
Sbjct: 694 VKNIPFGTTITQLQDLFAPHGDLKRVLLPPAGTIGVVEFVNNMDAGRAFKALAYRRLGNS 753
Query: 559 PLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVE--SR 616
LYLE P + N + + + L E+ E PD +
Sbjct: 754 VLYLEKGPVGMFKDP-----NAISTPAAKAAEERAKLTEKVAEAEATLRDKPDESDEAGA 808
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETA 675
+LF+KNL + T +E L + V+ K K G +SMG+GF+ F + + A
Sbjct: 809 TLFLKNLAWATTNETLASVL-SSLPGYSFSRVQTKPDPKRPGARLSMGYGFVGFKTKKEA 867
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS------STKLLVRNVAFEAQR 729
L+G +DGHA+ + +DE V+K K KS TKLLV+N+ FEA +
Sbjct: 868 QAALAGLEGFKIDGHAIEAKFAQRGQDE--VEKKHKTKSEEGKTKGTKLLVKNLPFEATK 925
Query: 730 K 730
K
Sbjct: 926 K 926
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 39/66 (59%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ +NLP ++ + + ++ + + TK R+FAF+GFRT+++A + ++
Sbjct: 303 SRLIFQNLPPNISPEAFKSKLTEPKTLQSVVVTDTKVVAKRRFAFVGFRTDEDAAKVKEW 362
Query: 61 FNKSYL 66
FN S++
Sbjct: 363 FNGSFV 368
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHI-----VVDKDTKRSKGIAYVLYAIPESAS 354
+L V+NLP+ AT+ ++R FS +G + + + + + ++G A++ + A
Sbjct: 913 KLLVKNLPFEATKKDVRALFSAYGTLKSLRVPRKSTMSATGAQSTRGFAFLEFTTHAEAQ 972
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTK 395
RA++ L ++ GR L A+ + S D L S+ +K
Sbjct: 973 RAMDALKHTHLLGRHLVTEWAKDEDSVDVDALREKVSRDSK 1013
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Query: 485 GKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----------STKTLA 533
GKT G K LVKNLP+++++ ++ +F +G+L + +P ST+ A
Sbjct: 907 GKTKGTK-----LLVKNLPFEATKKDVRALFSAYGTLKSLRVPRKSTMSATGAQSTRGFA 961
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
+ F EA A L + G L EWA
Sbjct: 962 FLEFTTHAEAQRAMDALKHTHLLGRHLVTEWA 993
>gi|405118918|gb|AFR93691.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. grubii H99]
Length = 752
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 244/466 (52%), Gaps = 30/466 (6%)
Query: 280 DPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS 339
+P P S+ + Q +L + RLFVRNL + + L HFS +G + E H+ V + T
Sbjct: 187 EPSTPQLSADE--QLILSTSRLFVRNLAFITNSESLSSHFSTYGRIDECHLPVSQTTGEP 244
Query: 340 KGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQ---------ELHNST 390
G A++ + PE A A LD + FQGRLLHV+P R K + ++
Sbjct: 245 LGTAFLQFHNPEDALAAYRALDKTTFQGRLLHVLPGRAKPGQEGAVAGSGVVDGKVLGKR 304
Query: 391 SQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL 450
+G +K + + +RK G W SL+M D V ++A + G+SKS+LL+ ++ +
Sbjct: 305 DEGRGEVKSKVDAKRKQESTKGVN--WASLYMNSDAVAASVADRMGMSKSELLNADSGNS 362
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AV++AL ET VI ETKK +AG+ + +L+ + RS LVKN+PY +S
Sbjct: 363 AVKLALAETTVIEETKKYFEDAGIVLETLQ-------PRVPRSQTTILVKNIPYGTSIQS 415
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
L +F G L +V+LP TL +V F ++A AFK LAY+R LYLE P +
Sbjct: 416 LTDLFAPHGKLTRVLLPPAGTLGVVEFENHMDAGRAFKALAYRRLGNAVLYLEKGPVGMF 475
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDE 630
+T + E +AK L +++E + + DP +LF+K LNF T
Sbjct: 476 KSETTPGAGPISTEQKREEEAK--ALAEKVESLPEQP-DPTDEAGSTLFLKGLNFATTTP 532
Query: 631 NLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDG 689
+L+ HI V++K K G+ +SMG+GF+ F + E AT + L+G +DG
Sbjct: 533 HLQTVL-SHIPGFSFARVQMKPDPKRPGEKLSMGYGFVGFKTKEAATKALKALEGFEIDG 591
Query: 690 HALILQLCH-AKKDEQVVKK---AEKDKS-STKLLVRNVAFEAQRK 730
+L ++ +D++ KK AE DK+ STK+LV+N+ FEA +K
Sbjct: 592 KSLEVKFAQRGLEDDRETKKSGDAEGDKTKSTKVLVKNLPFEATKK 637
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 130/321 (40%), Gaps = 74/321 (23%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+N+PY + L + F+ G ++ V + + + V + A RA + L
Sbjct: 402 ILVKNIPYGTSIQSLTDLFAPHGKLTRVLL------PPAGTLGVVEFENHMDAGRAFKAL 455
Query: 361 DNSIFQGRLLHV--MPARHKKSSDKQELHNSTSQGTKTLKQRREEERKA---------SE 409
+L++ P KS + G + +Q+REEE KA +
Sbjct: 456 AYRRLGNAVLYLEKGPVGMFKS------ETTPGAGPISTEQKREEEAKALAEKVESLPEQ 509
Query: 410 ASGNTKAWNSLFMRP----------DTVVENIARKHGVSKSDL-LDREANDLAVRIALGE 458
+A ++LF++ TV+ +I G S + + + + ++++G
Sbjct: 510 PDPTDEAGSTLFLKGLNFATTTPHLQTVLSHIP---GFSFARVQMKPDPKRPGEKLSMGY 566
Query: 459 TQVIAETKKALTNAGVNVSSLEEF-----------------------SAGKTDGLKRSNH 495
V +TK+A T A + +LE F +G +G K +
Sbjct: 567 GFVGFKTKEAATKA---LKALEGFEIDGKSLEVKFAQRGLEDDRETKKSGDAEGDKTKST 623
Query: 496 VFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----------STKTLALVVFLEPVEAA 544
LVKNLP+++++ ++ ++F +G L + LP ST+ A + F EAA
Sbjct: 624 KVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHTEAA 683
Query: 545 AAFKGLAYKRYKGVPLYLEWA 565
A + L + G L L+WA
Sbjct: 684 RAMEALKHTHLLGRHLVLQWA 704
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 288 SKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVH-----IVVDKDTKRSKGI 342
S D + + +S ++ V+NLP+ AT+ ++RE FS +G + + + + ++G
Sbjct: 612 SGDAEGDKTKSTKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGF 671
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLL 370
A++ + A+RA+E L ++ GR L
Sbjct: 672 AFLEFTTHTEAARAMEALKHTHLLGRHL 699
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 596 LEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKH-- 653
LE E D + D+ +S + VKNL F+ +++R+ F + G++ S+++ +
Sbjct: 603 LEDDRETKKSGDAEGDKTKSTKVLVKNLPFEATKKDVRELFSAY---GQLKSLRLPRKAV 659
Query: 654 -LKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
G + GF F+EF + A L+ T L G L+LQ +
Sbjct: 660 PTSTGAQSTRGFAFLEFTTHTEAARAMEALKHTHLLGRHLVLQWAN 705
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ NLP + D R + + TK R+FAF+G++ +EA+ ++
Sbjct: 7 SRLIFLNLPSSLNPDSFRKTLLSPATLKSTTITDTKLVPKRRFAFVGYKDAEEAQRVKEW 66
Query: 61 FNKSY 65
F+ +Y
Sbjct: 67 FDGTY 71
>gi|58265434|ref|XP_569873.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|134109003|ref|XP_776616.1| hypothetical protein CNBC1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818289|sp|P0CR17.1|MRD1_CRYNB RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|338818290|sp|P0CR16.1|MRD1_CRYNJ RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|50259296|gb|EAL21969.1| hypothetical protein CNBC1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226105|gb|AAW42566.1| rRNA primary transcript binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 769
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 245/467 (52%), Gaps = 32/467 (6%)
Query: 280 DPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS 339
+P P S+ + Q +L + RLFVRNL + T + L HFS +G + E H+ V + T
Sbjct: 204 EPSTPQLSADE--QLILSTSRLFVRNLAFITTSESLSSHFSTYGRIDECHLPVSQTTGEP 261
Query: 340 KGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQ 399
G A++ + E A A + LD +IFQGRLLHV+P R K + + G K L +
Sbjct: 262 LGTAFLQFHNAEDALAAYKALDKTIFQGRLLHVLPGRAKPGQEGAAAGSGVVDG-KVLGK 320
Query: 400 RRE----------EERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND 449
R E +RK A G W SL+M D V ++A + G+SKS+LL+ ++ +
Sbjct: 321 RDEGRGEVKSKVDAKRKQESAKGVN--WASLYMNSDAVAASVADRMGISKSELLNADSGN 378
Query: 450 LAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEG 509
AV++AL ET VI ETKK AG+ + SL+ + RS LVKN+PY +S
Sbjct: 379 SAVKLALAETTVIEETKKYFEEAGIVLESLQ-------PRVPRSQTTILVKNIPYGTSIQ 431
Query: 510 ELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDV 569
L +F G L +V+LP TL +V F ++A AFK LAY+R LYLE P +
Sbjct: 432 SLTDLFAPHGKLTRVLLPPAGTLGVVEFENHMDAGRAFKALAYRRLGNAVLYLEKGPVGM 491
Query: 570 LSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCD 629
+S T+ G + +AL E ++E + + DP +LF+K LNF T
Sbjct: 492 F-KSETAPGVGPISTEQKREEEAKALAE-KVESLPEQP-DPTDEAGSTLFLKGLNFTTTT 548
Query: 630 ENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILD 688
+L+ HI V++K K G+ +SMG+GF+ F + E AT + L+G +D
Sbjct: 549 PHLQTVL-SHIPGFSFARVQMKPDPKRPGEKLSMGYGFVGFKTKEAATKALKALEGFEID 607
Query: 689 GHALILQLCH-AKKDEQVVKK---AEKDKS-STKLLVRNVAFEAQRK 730
G +L ++ +D++ KK AE K+ STK+LV+N+ FEA +K
Sbjct: 608 GKSLEVKFAQRGAEDDRETKKGGDAEGGKTKSTKVLVKNLPFEATKK 654
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 126/328 (38%), Gaps = 88/328 (26%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+N+PY + L + F+ G ++ V +P + + +
Sbjct: 419 ILVKNIPYGTSIQSLTDLFAPHGKLTRV-------------------LLPPAGTLGVVEF 459
Query: 361 DNSIFQGRLLHVMPARH---------KKSSDKQELHNSTSQGTKTLKQRREEERKA---- 407
+N + GR + R K + + G + +Q+REEE KA
Sbjct: 460 ENHMDAGRAFKALAYRRLGNAVLYLEKGPVGMFKSETAPGVGPISTEQKREEEAKALAEK 519
Query: 408 -----SEASGNTKAWNSLFMRP----------DTVVENIARKHGVSKSDL-LDREANDLA 451
+ +A ++LF++ TV+ +I G S + + + +
Sbjct: 520 VESLPEQPDPTDEAGSTLFLKGLNFTTTTPHLQTVLSHIP---GFSFARVQMKPDPKRPG 576
Query: 452 VRIALGETQVIAETKKALTNAGVNVSSLEEF-----------------------SAGKTD 488
++++G V +TK+A T A + +LE F G +
Sbjct: 577 EKLSMGYGFVGFKTKEAATKA---LKALEGFEIDGKSLEVKFAQRGAEDDRETKKGGDAE 633
Query: 489 GLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----------STKTLALVVF 537
G K + LVKNLP+++++ ++ ++F +G L + LP ST+ A + F
Sbjct: 634 GGKTKSTKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEF 693
Query: 538 LEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
EAA A + L + G L L+WA
Sbjct: 694 TTHTEAARAMEALKHTHLLGRHLVLQWA 721
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVH-----IVVDKDTKRSKGIAYVLYAIPE 351
+S ++ V+NLP+ AT+ ++RE FS +G + + + + ++G A++ +
Sbjct: 638 KSTKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHT 697
Query: 352 SASRAIEVLDNSIFQGRLL 370
A+RA+E L ++ GR L
Sbjct: 698 EAARAMEALKHTHLLGRHL 716
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 606 ADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKH---LKNGKNVSM 662
D + + +S + VKNL F+ +++R+ F + G++ S+++ + G +
Sbjct: 630 GDAEGGKTKSTKVLVKNLPFEATKKDVRELFSAY---GQLKSLRLPRKAVPTSTGAQSTR 686
Query: 663 GFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
GF F+EF + A L+ T L G L+LQ +
Sbjct: 687 GFAFLEFTTHTEAARAMEALKHTHLLGRHLVLQWAN 722
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ NLP + D R + + TK R+FAF+G++ +EA++ ++
Sbjct: 24 SRLIFLNLPSTLNPDTFRKTLLSPATLKSTTITDTKLVPKRRFAFVGYKDAEEAQKVKEW 83
Query: 61 FNKSY 65
F+ +Y
Sbjct: 84 FDGTY 88
>gi|145538427|ref|XP_001454919.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422696|emb|CAK87522.1| unnamed protein product [Paramecium tetraurelia]
Length = 656
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/434 (33%), Positives = 239/434 (55%), Gaps = 42/434 (9%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL+V N+PYT+TE EL+ F K+G VS + I + S G +V Y +PE A RA
Sbjct: 192 RLYVTNIPYTSTEQELKTVFEKYGTVSSIKIPKQRGGSLS-GFCFVEYQLPEEAIRAFSE 250
Query: 360 LDNSIFQGRLLHVMPA----RHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
LDN I GR+ HV PA + ++ +Q++ G + ++ ++++ E +T
Sbjct: 251 LDNKIVLGRIFHVRPAFKDDKEEQLKQEQQMKQEKMIGEEKSSYKKFKKQQMLERLNDTT 310
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVN 475
+WN+LF+ P+T++E I +K+ + K ++L E +D+AV++A ETQVI ETK L + G+N
Sbjct: 311 SWNTLFLNPNTIIEGICKKYSLDKKEILSEENDDMAVKMAQMETQVIKETKDWLKSIGLN 370
Query: 476 VSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALV 535
+ +F + + +RSN VKN+ + +E +L ++F ++G ++KV L +++ ++
Sbjct: 371 I----DFLKVEKNQCERSNITIFVKNIQFRVNETDLNELFSRYGQVNKVYLAPNRSIGII 426
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRAL 595
+ +A AF L ++KG LYLEWAP+ ++ +S +K N+ N V
Sbjct: 427 TMQDDKQANNAFSNLQNYKFKGSILYLEWAPTTLMGES--NKTNEVNQQV---------- 474
Query: 596 LEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLK 655
E+Q +T R L+VKNLNF T ++NL K + + + +++
Sbjct: 475 -EEQENELT-----------RILYVKNLNFSTTEKNLLKFMSSKVNDIKKVTI------I 516
Query: 656 NGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKD--K 713
N + VS G+GFIEFD E+A V R L ILD H L L K + + K+ +K +
Sbjct: 517 NKEGVSQGYGFIEFDKPESAQKVLR-LNNLILDDHLLQLSQSKPKPKQDLNKRKQKQEIE 575
Query: 714 SSTKLLVRNVAFEA 727
+ KLL++N+ FEA
Sbjct: 576 PTNKLLIKNLPFEA 589
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKN+P +TE +L+ F +KGE++D K++ K K+R+F FIG++ E +A +A ++
Sbjct: 2 SRLIVKNIPNLITEAQLKTIFEKKGEVSDVKVI-FKGNKNRRFCFIGYKNESDAIKAKEH 60
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
F+K+++ +IS + A+ V DP +PR WSR++
Sbjct: 61 FDKTFVMMSKISVDFAKTVDDPALPRAWSRHT 92
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 144/331 (43%), Gaps = 46/331 (13%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
RL V+N+P TE +L+ F K G VS+V ++ + R ++ Y A +A E
Sbjct: 2 SRLIVKNIPNLITEAQLKTIFEKKGEVSDVKVIFKGNKNRR--FCFIGYKNESDAIKAKE 59
Query: 359 VLDNSIFQGRLLHV----------MP---ARHKKSSDKQELHNSTSQG--TKTLKQRREE 403
D + + V +P +RH S + N + + TK +KQ +E+
Sbjct: 60 HFDKTFVMMSKISVDFAKTVDDPALPRAWSRHTPGSSAFQKINKSQEPPVTKKVKQNKED 119
Query: 404 ERKASEASGNTKAWN-SLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI 462
+++ E K+ F+ + + N +S +D ++ + +++ +I + +V+
Sbjct: 120 QQEQEEPKNEVKSKKFQEFL--ELMKTNKKTNQEISWNDNVNNQVDEIFEKIEKEKPKVV 177
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
+ +K+ T A VN L V N+PY S+E EL +F K+G++
Sbjct: 178 QQPQKS-TPANVNERRL------------------YVTNIPYTSTEQELKTVFEKYGTVS 218
Query: 523 KVILPSTK--TLALVVFLE---PVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
+ +P + +L+ F+E P EA AF L K G ++ A D + +
Sbjct: 219 SIKIPKQRGGSLSGFCFVEYQLPEEAIRAFSELDNKIVLGRIFHVRPAFKDDKEEQLKQE 278
Query: 578 GNQKNDAVVGEHDA--KRALLEQQLEGVTDA 606
K + ++GE + K+ +Q LE + D
Sbjct: 279 QQMKQEKMIGEEKSSYKKFKKQQMLERLNDT 309
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
+QE+ + +L ++NLP+ A ELR ++G + ++ + D +G A+ + E
Sbjct: 571 KQEIEPTNKLLIKNLPFEANAQELRRLVKQYGELKKLRLPKKLDGS-IRGFAFAEFLNNE 629
Query: 352 SASRAIEVLDNSIFQGRLLHV 372
A A E L ++ F GR L +
Sbjct: 630 EAQNAAESLQSTHFYGRRLVI 650
>gi|406697498|gb|EKD00757.1| rRNA primary transcript binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 1039
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 158/456 (34%), Positives = 240/456 (52%), Gaps = 38/456 (8%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+L +GRLFVRNL + AT D+++ HF K+G + +VH+ V T G A+VL+ P +A
Sbjct: 488 ILNTGRLFVRNLAFVATADDIKAHFEKYGPIVDVHMPVSHSTGEPLGTAFVLFRDPNNAL 547
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQ---------ELHNSTSQGTKTLKQRREEER 405
A + LD + FQGRLLHV+P R + + ++ ++ +KQR++E+R
Sbjct: 548 SARQSLDKTTFQGRLLHVLPGRARPGQENASGVAGIIDGKVLGKATEARGEVKQRQDEKR 607
Query: 406 KASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL--AVRIALGETQVIA 463
KA A G W +L+M D V ++A++ GVSKS+LLD ++D+ AV++AL ETQVIA
Sbjct: 608 KADSARGVN--WATLYMNADAVAASVAKRMGVSKSELLD-GSDDMSPAVKLALAETQVIA 664
Query: 464 ETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDK 523
ETK N G+ + SL+ + RS LVKN+P+ ++ +L +F G L +
Sbjct: 665 ETKAYFENEGIVLDSLQP-------RVPRSQTTILVKNIPFGTTITQLQDLFAPHGDLKR 717
Query: 524 VILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKND 583
V+LP T+ +V F+ ++A AFK LAY+R LYLE P + N +
Sbjct: 718 VLLPPAGTIGVVEFVNNMDAGRAFKALAYRRLGNSVLYLEKGPVGMFKDP-----NAIST 772
Query: 584 AVVGEHDAKRALLEQQLEGVTDADIDPDRVE--SRSLFVKNLNFKTCDENLRKHFGEHIK 641
+ + L E+ E PD + +LF+KNL + T +E L +
Sbjct: 773 PAAKAAEERAKLTEKVAEAEATLRDKPDESDEAGATLFLKNLAWATTNETLASVL-SSLP 831
Query: 642 EGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
V+ K K G +SMG+GF+ F + + A L+G +DGHA+ +
Sbjct: 832 GYSFSRVQTKPDPKRPGARLSMGYGFVGFKTKKEAQAALAGLEGFKIDGHAIEAKFAQRG 891
Query: 701 KDEQVVKKAEKDKS------STKLLVRNVAFEAQRK 730
+DE V+K K KS TKLLV+N+ FEA +K
Sbjct: 892 QDE--VEKEHKTKSEEGKTKGTKLLVKNLPFEATKK 925
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 39/66 (59%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ +NLP ++ + + ++ + + TK R+FAF+GFRT+++A + ++
Sbjct: 299 SRLIFQNLPPNISPEAFKSKLTEPKTLQSVVVTDTKVVAKRRFAFVGFRTDEDAAKVKEW 358
Query: 61 FNKSYL 66
FN S++
Sbjct: 359 FNGSFV 364
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHI-----VVDKDTKRSKGIAYVLYAIPESAS 354
+L V+NLP+ AT+ ++R FS +G + + + + + ++G A++ + A
Sbjct: 912 KLLVKNLPFEATKKDVRALFSAYGTLKSLRVPRKSTMSATGAQSTRGFAFLEFTTHAEAQ 971
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTK 395
RA++ L ++ GR L A+ + S D L S+ +K
Sbjct: 972 RAMDALKHTHLLGRHLVTEWAKDEDSVDVDALREKVSRDSK 1012
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Query: 485 GKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----------STKTLA 533
GKT G K LVKNLP+++++ ++ +F +G+L + +P ST+ A
Sbjct: 906 GKTKGTK-----LLVKNLPFEATKKDVRALFSAYGTLKSLRVPRKSTMSATGAQSTRGFA 960
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
+ F EA A L + G L EWA
Sbjct: 961 FLEFTTHAEAQRAMDALKHTHLLGRHLVTEWA 992
>gi|321254501|ref|XP_003193094.1| rRNA primary transcript binding protein [Cryptococcus gattii WM276]
gi|317459563|gb|ADV21307.1| rRNA primary transcript binding protein, putative [Cryptococcus
gattii WM276]
Length = 773
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 162/465 (34%), Positives = 245/465 (52%), Gaps = 29/465 (6%)
Query: 282 GNPSSSSKDV-QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
G PS+ +Q +L + RLFVRNL + T + L HFS +G + E H+ V + T
Sbjct: 207 GEPSAPQLSADEQLILSTSRLFVRNLAFITTSESLSTHFSTYGRIDECHLPVSQTTGEPL 266
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK---------QELHNSTS 391
G A++ + E A A + LD + FQGRLLHV+P R K + ++
Sbjct: 267 GTAFLQFHNAEDALSAYKALDKTTFQGRLLHVLPGRAKPGQEGAVGGSGVVDSKVLGKRD 326
Query: 392 QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLA 451
QG +K + +E RK A G W SL+M D V ++A + G+SKS+LL+ ++ + A
Sbjct: 327 QGKGEVKSKVDERRKQESAKGVN--WASLYMNSDAVAASVADRMGISKSELLNADSGNSA 384
Query: 452 VRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGEL 511
V++AL ET VI ETKK +AG+ + SL+ + RS LVKN+PY +S L
Sbjct: 385 VKLALAETTVIEETKKYFEDAGIVLESLQ-------PRVPRSQTTILVKNIPYGTSIQSL 437
Query: 512 AKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS 571
+F G L +V+LP TL +V F ++A AFK LAY+R LYLE P +
Sbjct: 438 TDLFAPHGKLTRVLLPPAGTLGVVEFENHMDAGRAFKALAYRRLGNAVLYLEKGPVGMF- 496
Query: 572 QSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDEN 631
+S T+ G+ + +AL E ++E + + DP +LF+K LNF T +
Sbjct: 497 KSETAPGSGPMSTEQKREEEAKALAE-KVESLPEQP-DPTDEAGSTLFLKGLNFATTTAH 554
Query: 632 LRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGH 690
L+ +I V++K K G+ +SMG+GF+ F + E AT + L+G +DG
Sbjct: 555 LQTVL-SNIPGFSFARVQMKPDPKRPGEKLSMGYGFVGFKTKEAATKALKALEGFEIDGK 613
Query: 691 ALILQLCH-AKKDEQVVKK---AEKDKS-STKLLVRNVAFEAQRK 730
L ++ +D++ KK AE K+ STK+LV+N+ FEA +K
Sbjct: 614 NLEVRFAQRGAEDDRETKKAGDAEGGKTKSTKVLVKNLPFEATKK 658
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 130/321 (40%), Gaps = 74/321 (23%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+N+PY + L + F+ G ++ V + + + V + A RA + L
Sbjct: 423 ILVKNIPYGTSIQSLTDLFAPHGKLTRVLL------PPAGTLGVVEFENHMDAGRAFKAL 476
Query: 361 DNSIFQGRLLHV--MPARHKKSSDKQELHNSTSQGTKTLKQRREEERKA---------SE 409
+L++ P KS + G + +Q+REEE KA +
Sbjct: 477 AYRRLGNAVLYLEKGPVGMFKS------ETAPGSGPMSTEQKREEEAKALAEKVESLPEQ 530
Query: 410 ASGNTKAWNSLFMRP----------DTVVENIARKHGVSKSDL-LDREANDLAVRIALGE 458
+A ++LF++ TV+ NI G S + + + + ++++G
Sbjct: 531 PDPTDEAGSTLFLKGLNFATTTAHLQTVLSNIP---GFSFARVQMKPDPKRPGEKLSMGY 587
Query: 459 TQVIAETKKALTNAGVNVSSLEEF-----------------------SAGKTDGLKRSNH 495
V +TK+A T A + +LE F AG +G K +
Sbjct: 588 GFVGFKTKEAATKA---LKALEGFEIDGKNLEVRFAQRGAEDDRETKKAGDAEGGKTKST 644
Query: 496 VFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----------STKTLALVVFLEPVEAA 544
LVKNLP+++++ ++ ++F +G L + LP ST+ A + F EAA
Sbjct: 645 KVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHTEAA 704
Query: 545 AAFKGLAYKRYKGVPLYLEWA 565
A + L + G L L+WA
Sbjct: 705 RAMEALKHTHLLGRHLVLQWA 725
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVH-----IVVDKDTKRSKGIAYVLYAIPES 352
S ++ V+NLP+ AT+ ++RE FS +G + + + + ++G A++ +
Sbjct: 643 STKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHTE 702
Query: 353 ASRAIEVLDNSIFQGRLL 370
A+RA+E L ++ GR L
Sbjct: 703 AARAMEALKHTHLLGRHL 720
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 606 ADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKH---LKNGKNVSM 662
D + + +S + VKNL F+ +++R+ F + G++ S+++ + G +
Sbjct: 634 GDAEGGKTKSTKVLVKNLPFEATKKDVRELFSAY---GQLKSLRLPRKAVPTSTGAQSTR 690
Query: 663 GFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
GF F+EF + A L+ T L G L+LQ +
Sbjct: 691 GFAFLEFTTHTEAARAMEALKHTHLLGRHLVLQWAN 726
>gi|340924295|gb|EGS19198.1| multiple RNA-binding domain-containing protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 832
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 162/453 (35%), Positives = 245/453 (54%), Gaps = 37/453 (8%)
Query: 287 SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
S +D + ++ RLF+RNL YT TED+LREHFS+FG + EV++ +D + RSKG A +
Sbjct: 298 SMEDAIATINKTRRLFLRNLSYTTTEDDLREHFSRFGALEEVNLPLD-NQNRSKGFAMIR 356
Query: 347 YAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERK 406
+ PE+A A + LD S FQGRLLH++PA K+ E S K +K
Sbjct: 357 FEKPEAAVAAFQ-LDGSTFQGRLLHILPAAPKREFKLDEFALSKLPLKKQ-----LLLKK 410
Query: 407 ASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETK 466
+EA+ +T WNSLFM D V +A + G+SK +LLD AV+ A+ ET VI E K
Sbjct: 411 KAEAASSTFNWNSLFMSQDAVNTAVAERLGISKHELLDPTDASAAVKQAIAETSVIQEAK 470
Query: 467 KALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVIL 526
GVN+ + + +R + V LVKN+ ++E EL +F + GS+ +V++
Sbjct: 471 TYFAKHGVNIEAFK--------NQQRGDTVILVKNIKNTTAE-ELRDLFAEHGSVLRVLM 521
Query: 527 PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST-SKGNQKNDAV 585
P + T+A+V F +P AAF AY R+K L+LE P + + + +GNQ
Sbjct: 522 PPSGTIAIVQFAQPAACRAAFAKKAYSRFKDSVLFLEKGPKGLFTDTPPLQQGNQTTGV- 580
Query: 586 VGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRI 645
+ L +L DA+ + VE+ SL+V+NLNF T E L F +H+
Sbjct: 581 -------QKLSAAELLARDDAE-EESTVETSSLYVRNLNFSTTSEGLANAF-KHLDGFVS 631
Query: 646 LSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH------ 698
+VK K K G+ +SMGFGF F + E A + + GT+LDG+ L+++ H
Sbjct: 632 ATVKTKPDPKKPGQVLSMGFGFCVFRTKEQAQAALKAMDGTVLDGYKLVIKASHRGLDAA 691
Query: 699 -AKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
++ E + KKA K K++++N+ F+A +K
Sbjct: 692 EERRREDLAKKAAVVKR--KIVIKNLPFQATKK 722
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI VKNLP +TE R F+ +G ++TD KL SR+ FIG+++ ++A A+K
Sbjct: 4 SRIFVKNLPPNITESDFRKHFAVQGRQVTDVKLY-----PSRRIGFIGYKSAEDAAWAVK 58
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGE----- 114
YFNK+++ RI+ ++A+ + D ++P+ ++ + P + E
Sbjct: 59 YFNKTFIRLSRIAVDLAKPIAD-SIPKNGAKLTPANGSARISLHNAPASGIGQAEDGNSK 117
Query: 115 KKTIEKVTENDDPQLLEFLQVM 136
K+ E+ E DP+L EFL+VM
Sbjct: 118 KRKREEPAEEADPKLREFLEVM 139
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
V R + +KNL F+ +++R FG + G++++V+V K + S GF F EF +
Sbjct: 705 VVKRKIVIKNLPFQATKKDIRDLFGTY---GKLVAVRVPKKFNSQ---SRGFAFAEFATA 758
Query: 673 ETATNVCRDLQGTILDGHALILQLCHAKK--DEQVVKKAEK 711
+ A N L+ T L G L+L A + E+ +K EK
Sbjct: 759 KEALNALTALKDTHLLGRRLVLDFAEADEVDPEEQIKAMEK 799
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+I +KNLP T+ +RD F G++ ++ + + +SR FAF F T +EA A+
Sbjct: 709 KIVIKNLPFQATKKDIRDLFGTYGKLVAVRVPKKFNSQSRGFAFAEFATAKEALNALTAL 768
Query: 62 NKSYLDTCRISCEIA 76
++L R+ + A
Sbjct: 769 KDTHLLGRRLVLDFA 783
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R+ F +G + V V K +S+G A+ +A + A A+
Sbjct: 709 KIVIKNLPFQATKKDIRDLFGTYGKLVAVR-VPKKFNSQSRGFAFAEFATAKEALNALTA 767
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 768 LKDTHLLGRRL 778
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
++S R+FV+NLP TE + R+HF+ G V D S+ I ++ Y E A+
Sbjct: 1 MQSSRIFVKNLPPNITESDFRKHFAVQGRQ-----VTDVKLYPSRRIGFIGYKSAEDAAW 55
Query: 356 AIEVLDNSIFQ 366
A++ + + +
Sbjct: 56 AVKYFNKTFIR 66
>gi|328852591|gb|EGG01736.1| hypothetical protein MELLADRAFT_23270 [Melampsora larici-populina
98AG31]
Length = 510
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/454 (33%), Positives = 238/454 (52%), Gaps = 34/454 (7%)
Query: 287 SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
SS + +L++GRLF+RNLP++ E++L FS +G VS+VHI ++++ K+ KG+AYV
Sbjct: 4 SSTSTEACILQTGRLFLRNLPFSLLEEDLMSLFSTYGAVSQVHIPLNRERKQ-KGVAYVS 62
Query: 347 YAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERK 406
+ A A + LD FQGRLLH++PA + + + E S G +KQ ++ +RK
Sbjct: 63 FERSSDALEAFKQLDQRDFQGRLLHILPAVTRNARPENE---SGRAGKNVVKQEQDLKRK 119
Query: 407 ASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETK 466
S W SL+M D V ++A + +SKS+L D ++ + ++++AL ET VI ETK
Sbjct: 120 L--VSSKQFNWASLYMNSDAVAASVADRLKISKSELYDPDSQNPSIKLALAETHVITETK 177
Query: 467 KALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVIL 526
+ G+N + + G RS+ LVKN+PY ++ L MF G + ++++
Sbjct: 178 EYFEEQGINTEAFSQIKNG------RSSTTLLVKNIPYGTTSQVLRSMFTPHGEVSRILI 231
Query: 527 PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVV 586
P + T+ALV + +AFK LAYKR LYLE AP + ++ D ++
Sbjct: 232 PPSGTIALVEMHNAEDTKSAFKSLAYKRVGNSVLYLERAPDGIWKPNAPKPSATAFDGII 291
Query: 587 GEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRIL 646
+ ID S +LFVKN+++ T E F +
Sbjct: 292 SSVPPAQP----------KVSIDEGEPGS-TLFVKNISYSTTSEGFSSSFST-FPDFLFA 339
Query: 647 SVKVKKHLKNGKN-VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQ- 704
++ K KN KN +SMGFGF+ F +V A +V + QG LD HAL ++ + K+E+
Sbjct: 340 RLQTKPDPKNPKNRLSMGFGFVGFKTVSAAQHVIKAAQGYRLDAHALEIKFANRGKEEEE 399
Query: 705 --------VVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ K++ SSTKLLV+NV FE ++
Sbjct: 400 KDSRNGGIITKESNDGISSTKLLVKNVPFETSKQ 433
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 130/313 (41%), Gaps = 62/313 (19%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHI-------VVD----KDTKRS-KGIAY- 344
S L V+N+PY T LR F+ G VS + I +V+ +DTK + K +AY
Sbjct: 199 STTLLVKNIPYGTTSQVLRSMFTPHGEVSRILIPPSGTIALVEMHNAEDTKSAFKSLAYK 258
Query: 345 -----VLYAIPESASRAI-----EVLDNSIFQGRLLHVMPARHKKSSDKQEL-------- 386
VLY E A I + F G + V PA+ K S D+ E
Sbjct: 259 RVGNSVLYL--ERAPDGIWKPNAPKPSATAFDGIISSVPPAQPKVSIDEGEPGSTLFVKN 316
Query: 387 --HNSTSQGTKT-------LKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGV 437
+++TS+G + R + + + N + F+ TV A +H +
Sbjct: 317 ISYSTTSEGFSSSFSTFPDFLFARLQTKPDPKNPKNRLSMGFGFVGFKTVS---AAQHVI 373
Query: 438 SKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVF 497
+ +A+ L ++ A + E +K N G+ + DG+ S+
Sbjct: 374 KAAQGYRLDAHALEIKFA---NRGKEEEEKDSRNGGI-------ITKESNDGI--SSTKL 421
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
LVKN+P+++S+ EL ++FG FG L V LP T+ + + EA A K L +
Sbjct: 422 LVKNVPFETSKQELRELFGSFGKLKSVRLPKKLDRKTRGFGFIEYTTKKEAEEAMKSLKH 481
Query: 553 KRYKGVPLYLEWA 565
G L + +A
Sbjct: 482 THLLGRHLVISYA 494
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P ++ LR+ F G++ +L + D K+R F FI + T++EAEEA+K
Sbjct: 419 TKLLVKNVPFETSKQELRELFGSFGKLKSVRLPKKLDRKTRGFGFIEYTTKKEAEEAMKS 478
Query: 61 FNKSYL 66
++L
Sbjct: 479 LKHTHL 484
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 611 DRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFD 670
D + S L VKN+ F+T + LR+ FG G++ SV++ K L + GFGFIE+
Sbjct: 414 DGISSTKLLVKNVPFETSKQELRELFGSF---GKLKSVRLPKKLDRK---TRGFGFIEYT 467
Query: 671 SVETATNVCRDLQGTILDGHALILQLCHAKKDEQV 705
+ + A + L+ T L G L++ + KDE +
Sbjct: 468 TKKEAEEAMKSLKHTHLLGRHLVISYAN-DKDEDI 501
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ S +L V+N+P+ ++ ELRE F FG + V + D ++++G ++ Y + A
Sbjct: 416 ISSTKLLVKNVPFETSKQELRELFGSFGKLKSVRLPKKLD-RKTRGFGFIEYTTKKEAEE 474
Query: 356 AIEVLDNSIFQGRLLHVMPARHK 378
A++ L ++ GR L + A K
Sbjct: 475 AMKSLKHTHLLGRHLVISYANDK 497
>gi|158292878|ref|XP_314164.4| AGAP005249-PA [Anopheles gambiae str. PEST]
gi|157017199|gb|EAA09490.4| AGAP005249-PA [Anopheles gambiae str. PEST]
Length = 862
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 242/452 (53%), Gaps = 39/452 (8%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+ + ESGRLF RNL Y+ E ++R F ++G V+EV + +D +T++ KG V + IPE
Sbjct: 300 EAICESGRLFFRNLAYSVQESDIRTLFEQYGPVAEVDVPIDSNTRKLKGFGTVTFMIPEH 359
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG 412
A A L+ + QGR+ H++PA+ + + + T R+++E+ + +
Sbjct: 360 AVTAYNELNGTFLQGRMFHILPAK---------VPSDEAADDDTTDYRKKKEQTQKKTAQ 410
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL--AVRIALGETQVIAETKKALT 470
++ WN+LFM + V E +A+K+G +K +L D AVR+ALGET+++ E + L
Sbjct: 411 SSHNWNTLFMGENAVAEAVAKKYGTTKEQILISSEGDTSAAVRLALGETELVLEMESFLK 470
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK 530
G+ SL+ FS+ TD KRS+ V L KNL + L K+F FG L +V+LP +
Sbjct: 471 ENGI---SLDAFSS--TDA-KRSSTVILAKNLAPGCTAAALRKLFAPFGLLGRVVLPPSA 524
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ--SSTSKGNQKNDAVVGE 588
A++ FL+P EA AFK LAY ++ +PLYLEWAP + S + + +
Sbjct: 525 VTAVIEFLDPSEARKAFKKLAYSMFESLPLYLEWAPVGTFTSGPSGPPSTEEPSKSSTAP 584
Query: 589 HDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSV 648
+A A E ++ D +P+ E +LF+KNL+F T ++ +R+ F G I V
Sbjct: 585 ENASNATEEATVD-----DTEPE--EGTTLFIKNLSFTTNEDAIRERFR---CVGAIHMV 634
Query: 649 KVKKHL---KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHAL-------ILQLCH 698
+V + + NG+N S G+GFI+F + A ++LQ +DG + L+
Sbjct: 635 QVVRSMDLSGNGRNESRGYGFIQFKRRQVADYALKNLQSVQIDGRTVELARSDRTLRTAQ 694
Query: 699 AKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ + K + ++ K+LVRN+ F+A K
Sbjct: 695 EGAERRKGAKGAQKQTGCKILVRNIPFQASAK 726
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 14/156 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VKN+P E ++R FS G ITD +L T +GK R F FIGF +E++A +AI +
Sbjct: 2 SRIIVKNIPNGYDEAKVRSHFSTCGIITDVQLKYTSEGKFRNFGFIGFESEEQATKAIAH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEK----EVSEDEKNPVLAAKRGEKK 116
FN SY+ T +I+ + + + WS+++ K E ++DE AK EK
Sbjct: 62 FNNSYIRTSKITVAACVALSESKNLKVWSKHAQKPATTETVEPAKDESK----AKGKEKP 117
Query: 117 TIEKVTE-----NDDPQLLEFLQVMQPRVKSKMWAN 147
+ + DP+ EFL + R +W N
Sbjct: 118 KAQTAKDVLGQYEKDPKFQEFLSAHK-RAGKSVWDN 152
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 156/407 (38%), Gaps = 46/407 (11%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ V+N+P E ++R HFS G +++V + + K + ++ + E A++AI
Sbjct: 3 RIIVKNIPNGYDEAKVRSHFSTCGIITDVQLKYTSEGK-FRNFGFIGFESEEQATKAIAH 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQEL---HNSTSQGTKTLKQRREEER-KASEASGNTK 415
+NS + + V S ++ H T+T++ ++E + K E
Sbjct: 62 FNNSYIRTSKITVAACVALSESKNLKVWSKHAQKPATTETVEPAKDESKAKGKEKPKAQT 121
Query: 416 AWNSLF-MRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGV 474
A + L D + H + + D L E AE K ++ V
Sbjct: 122 AKDVLGQYEKDPKFQEFLSAHKRAGKSVWDN----------LLEQSTEAEEKSVSGDSAV 171
Query: 475 NVSSLEEFSAGKTDGLKRSN----HVFLVK--NLPYDSSEGELAKMFGKFGSLDKVILPS 528
+V E A D K + +F+ K N+P + +L + F I P
Sbjct: 172 DVEPPAEAKAKDEDEKKAAKKPMVSLFVAKVHNIPSSTKRQDLIRFFKTVKPYSVRIPPK 231
Query: 529 TKTLALVVFLEPVEAAAAFKGLAYKRYKG---VPLYLEWAPSDVLSQSSTSKGNQKNDAV 585
A V F E + A L K + G V ++ D ++S+ +K +A
Sbjct: 232 QSGFAYVGFKTESELSKAL--LMNKSFLGGKQVKIF------DFTARSAAHAAQEKPEAK 283
Query: 586 VGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRI 645
G K+A E+Q + I ES LF +NL + + ++R F ++ G +
Sbjct: 284 QG----KQAKWERQKANASSEAI----CESGRLFFRNLAYSVQESDIRTLFEQY---GPV 332
Query: 646 LSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHAL 692
V V + + GFG + F E A +L GT L G
Sbjct: 333 AEVDVP--IDSNTRKLKGFGTVTFMIPEHAVTAYNELNGTFLQGRMF 377
>gi|398398892|ref|XP_003852903.1| hypothetical protein MYCGRDRAFT_85600 [Zymoseptoria tritici IPO323]
gi|339472785|gb|EGP87879.1| hypothetical protein MYCGRDRAFT_85600 [Zymoseptoria tritici IPO323]
Length = 770
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 165/479 (34%), Positives = 251/479 (52%), Gaps = 55/479 (11%)
Query: 275 NGEIVDPGNP------SSSSKDVQQEVLESG-RLFVRNLPYTATEDELREHFSKFGNVSE 327
N EI P P +S DV+ E + S RLFVRNLP+ +++L+ F+ +GN+ E
Sbjct: 216 NPEISIPTPPMDDNEAQEASGDVEIEAVRSSMRLFVRNLPFNVQKEDLQAEFASYGNLEE 275
Query: 328 VHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS--DKQE 385
VH+ +D T KG Y+ ++ P+SA +A D FQGRLLHV+P K+ + D E
Sbjct: 276 VHVPLDPKTGAGKGFGYIQFSNPDSAEQAFVDRDGQTFQGRLLHVLPGSAKRENKLDDFE 335
Query: 386 LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDR 445
L + + +K++R EA+ +T WN+L+M D VV ++A K G+SKS++LD
Sbjct: 336 LSKLPLKKQQQIKRKR-------EAATSTFNWNALYMNADAVVSSVADKLGLSKSEVLDP 388
Query: 446 EANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYD 505
++D A++ A ET +I ETK GV++ S + G T LVKN+P D
Sbjct: 389 TSSDAAIKQAHAETHIIQETKSFFKQQGVDLDSFKRSQRGDT--------AILVKNIPSD 440
Query: 506 SSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
S EL ++F + G + K ++P T+A+V FL + AAF LAY++ K L+LE A
Sbjct: 441 CSRDELKRLFEEQGDVKKFLMPPAGTIAIVEFLNAAQCKAAFAALAYRKVKSSVLFLEKA 500
Query: 566 PSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADI-DPDRVESR-----SLF 619
P DV + G D V D + V+ +D+ DPD+ + +LF
Sbjct: 501 PKDVFA------GKPIGDGVSQAQDG--------VSKVSTSDLKDPDQTVAETGGTATLF 546
Query: 620 VKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNVSMGFGFIEFDSVETAT 676
V+NLNF T + L + F +G LS +VK + G+ +SMGFGF+EF S A
Sbjct: 547 VRNLNFSTNNAVLTETFKPL--DG-FLSARVKTRTDPKRPGEILSMGFGFLEFASARQAQ 603
Query: 677 NVCRDLQGTILDGHALILQLCH-----AKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ G L+GH L ++ H A++ ++ + TKLL++N+ FEA +K
Sbjct: 604 AALSVMDGYSLEGHKLQIRASHKGADAAEERKKADAAKKAAGRGTKLLIKNLPFEATKK 662
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 16/154 (10%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI VK LP TE R FSQ E+TDAK+ +R+ ++G++T ++A++A+K
Sbjct: 4 SRIFVKGLPPTFTEAEFRKHFSQADREVTDAKIF-----PNRRIGYVGYKTPEDAQKAVK 58
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPR---PWSRYSLKKEKEVSEDEKNPVLAAKRGEKK 116
YFN++++ RI E+AR + + R P +R + + E + +E N L KR E
Sbjct: 59 YFNRTFVRMSRIGVELARPIEESKSVRGGAPTARRDVVAQ-EAANNENN--LKRKR-ESN 114
Query: 117 TIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTL 150
EK DP+L EFL V +P+ K W ++ L
Sbjct: 115 VPEK---EKDPKLQEFLDVYKPKSKKNAWESEKL 145
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES R+FV+ LP T TE E R+HFS+ V D ++ I YV Y PE A +
Sbjct: 1 MESSRIFVKGLPPTFTEAEFRKHFSQAD-----REVTDAKIFPNRRIGYVGYKTPEDAQK 55
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
A++ + + + + V AR
Sbjct: 56 AVKYFNRTFVRMSRIGVELAR 76
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
L +KNL F+ +++R FG + G++ SV+V K + + + GF F +F +V+ A +
Sbjct: 650 LLIKNLPFEATKKDVRALFGAY---GQLRSVRVPKKMNSA---ARGFAFADFTTVKEAQS 703
Query: 678 VCRDLQGTILDGHALILQLC 697
L+ T L G L++
Sbjct: 704 AMEALRDTHLLGRRLVIDFA 723
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ +KNLP T+ +R F G++ ++ + + +R FAF F T +EA+ A++
Sbjct: 648 TKLLIKNLPFEATKKDVRALFGAYGQLRSVRVPKKMNSAARGFAFADFTTVKEAQSAMEA 707
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ + A
Sbjct: 708 LRDTHLLGRRLVIDFA 723
>gi|392579716|gb|EIW72843.1| hypothetical protein TREMEDRAFT_25743, partial [Tremella
mesenterica DSM 1558]
Length = 749
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 153/457 (33%), Positives = 235/457 (51%), Gaps = 34/457 (7%)
Query: 284 PSSSSKDV---QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
P++ DV ++ +L + RLFVRNLP+ T +L HFS+FG V +VH+ + +
Sbjct: 200 PAADESDVGPDERLILSTSRLFVRNLPFVTTTSDLETHFSRFGQVDQVHLPLSP-AGQPL 258
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
G A+VL+ PE A A LD + FQGRLLHV+P R + H + G +K+
Sbjct: 259 GTAFVLFRRPEDALSAFRELDKTTFQGRLLHVLPGRARPG------HEVSGVGKGDVKKG 312
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
E +RK A G W SL+M D V ++A++ G+SK++LL+ + + AV++AL ET
Sbjct: 313 VETKRKEQSAKGVN--WASLYMNSDAVAASVAQRMGISKAELLNGDDGNAAVKLALAETH 370
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
VI ETK+ G+ + +L + RS + L+KN+P+ +S+ L +F G
Sbjct: 371 VIEETKRYFEEQGIVIEALSPRTP-------RSQTILLIKNIPFGTSQHTLTDLFSPHGE 423
Query: 521 LDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQ 580
+ +++LP + TL +V ++ +A AFK L+Y+R LYLE P + + G
Sbjct: 424 IKRLLLPPSGTLGVVEYVNASDAGKAFKALSYRRLGNAVLYLEKGPVGMFLDKEPTTG-- 481
Query: 581 KNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHI 640
V D L E+ DA DP +LF+KNL+F T E L I
Sbjct: 482 --PTVTKVTDVALELTERVENASKDAP-DPSDEAGSTLFLKNLSFATTTERLISVLFA-I 537
Query: 641 KEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHA 699
+ V+ K K G+ +SMG+GF+ F + E A+ L G +DG L++ A
Sbjct: 538 PGYSFVRVQTKPDPKRPGERLSMGYGFVGFKTKEAASKALPGLDGFEVDGKK--LEVKFA 595
Query: 700 KKDEQVVKKAEKD------KSSTKLLVRNVAFEAQRK 730
++ + V+K EK TKLLV+N+ FEA +K
Sbjct: 596 QRGVEDVQKEEKGGEMKGKSKGTKLLVKNLPFEATKK 632
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 25/139 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ +NLP +T + + ++D + T+ R+FAF GF++ ++A + +
Sbjct: 1 SRLIFRNLPPTITPESFSKSLASPASLSDIVITDTRVNPKRRFAFAGFKSPEDAAKVQSW 60
Query: 61 FNKSYL-DTCRISCEIARKVGDPNMPRPWSRYSLKKEK-EVSEDEKNPVLAAKRGEKKTI 118
F+ +Y+ ++ E+ R+ RP S + K V+ D K V+A
Sbjct: 61 FDDTYVFGGGKVKVEVVRE-------RPLEVKSFQARKPPVATDLKENVVA--------- 104
Query: 119 EKVTENDDPQLLEFLQVMQ 137
D +L EF++VM+
Sbjct: 105 -------DGKLKEFMEVMK 116
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHI-----VVDKDTKRSKGIAYVLYAIPESAS 354
+L V+NLP+ AT+ E++E FS +G V + + + S+G A++ + A
Sbjct: 619 KLLVKNLPFEATKKEVKELFSAYGQVKSLRVPKKPTLSASGAHSSRGFAFLEFTTHVEAQ 678
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTL 397
RA++ L ++ GR L + A+ D L S+ + L
Sbjct: 679 RAMDALKHTHLLGRHLVIQWAKEDDEVDVSGLREKASRDARFL 721
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 16/95 (16%)
Query: 485 GKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL-----------A 533
GK+ G K LVKNLP+++++ E+ ++F +G + + +P TL A
Sbjct: 613 GKSKGTK-----LLVKNLPFEATKKEVKELFSAYGQVKSLRVPKKPTLSASGAHSSRGFA 667
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSD 568
+ F VEA A L + G L ++WA D
Sbjct: 668 FLEFTTHVEAQRAMDALKHTHLLGRHLVIQWAKED 702
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLK---NGKNVSMGFGFIEFDSVET 674
L VKNL F+ + +++ F + G++ S++V K +G + S GF F+EF +
Sbjct: 620 LLVKNLPFEATKKEVKELFSAY---GQVKSLRVPKKPTLSASGAHSSRGFAFLEFTTHVE 676
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSS 715
A L+ T L G L++Q AK+D++V ++K+S
Sbjct: 677 AQRAMDALKHTHLLGRHLVIQW--AKEDDEVDVSGLREKAS 715
>gi|403368470|gb|EJY84070.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 804
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 168/495 (33%), Positives = 263/495 (53%), Gaps = 88/495 (17%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+++ R++V NL +T +ELRE F FG ++++ I + K +S G A++ YA E+A
Sbjct: 245 IIDEQRIYVMNLAFTINHEELREKFGPFGEIADIEIPLRKGG-QSFGFAFIKYATVEAAV 303
Query: 355 RAIEVLDNSIFQGRLLHVMPARHK-----------KSSDKQELHNSTSQGTKTLK---QR 400
A LD + +QGR LH++PA+ K K D+Q N + +G +K Q
Sbjct: 304 SAYAELDKTFYQGRKLHILPAQKKPPKEIPDFNPTKEGDEQ---NQSQEGDVEMKESNQN 360
Query: 401 REEERKASEASGNTKA--------------------------WNSLFMRPDTVVENIARK 434
+EE+++ + K WN LFM D V ++A K
Sbjct: 361 QEEQKQPEQKQPEQKEKIREKKSTFKEEKEKEVKENFDDETNWNYLFMNQDAVATSMASK 420
Query: 435 HGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGL--KR 492
+SK LLDR+ +LAVR+A ET +I +TK+ + G+++ LE +TD L KR
Sbjct: 421 LNISKGSLLDRDQKNLAVRVAKAETIIINQTKEWMKENGIDLDRLE-----RTDRLKCKR 475
Query: 493 SNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAY 552
S+ V +VKN+PY + E ++ ++F ++G L +++L TLALV + +A A K L
Sbjct: 476 SHTVIIVKNIPYHTKEQDIREVFERYGVLKRLLLSPFNTLALVEYDNEKQAKTAMKNLQN 535
Query: 553 KRYKGV-PLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPD 611
+ + P+YLE+AP ++S+S A + + D K+ + E+++E + D D
Sbjct: 536 HKINYIMPIYLEYAPV-IISKS----------AALTKEDEKK-VQEKEVEEQKQQE-DND 582
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKN-VSMGFGFIEFD 670
+ R++FVKNLNF T +E L + F E K G+ILS K+ +KN +N +S G+GF+E +
Sbjct: 583 QKGERTIFVKNLNFSTVEEQLEQVFKE-AKVGKILSCKI---VKNNENQLSRGYGFVELE 638
Query: 671 SVETATNVCRDLQGTILDGHALILQL-----CHAKK---DEQVVKKAEK----------D 712
S E A + LQ ILD HAL L + A+K D+Q+ K+ EK D
Sbjct: 639 SKEMAEKAIKKLQNFILDEHALKLSISKKDVTKAEKKSNDDQLGKRKEKTELSKVEAQED 698
Query: 713 KSSTKLLVRNVAFEA 727
S KLLV+N+AFEA
Sbjct: 699 LQSNKLLVKNLAFEA 713
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 99/164 (60%), Gaps = 14/164 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SR+ VKN+PK++ E RLR F ++G +TDAK+M+ K KSR FAF+GF++E+EAE+A K
Sbjct: 32 SRLIVKNIPKHLDEQRLRLHFQKEGGHVTDAKIMK-KGNKSRLFAFVGFKSEEEAEKAKK 90
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYS-------LKKEKEVSEDEKNPVLAAKR 112
YFN SY+DT ++ E A DP + RPWSRYS +K KE +E K
Sbjct: 91 YFNNSYIDTSKVQVEFALAQNDPKLSRPWSRYSKGSSAFLMKNGKESNEKAK-----MTE 145
Query: 113 GEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMAD 156
EK+ +++ EN + FL+VM ++K ND+ MAD
Sbjct: 146 EEKEQVKQEIENKKDKFRSFLKVMGMSKENKQSWNDSFTAFMAD 189
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 27/223 (12%)
Query: 488 DGLKRSNHVFLVKNLPYDSSEGELAKMF-----GKFGSLDKVILPSTKTLALVVFLEPVE 542
D ++ VKNL + + E +L ++F GK S K++ + L+ +E
Sbjct: 580 DNDQKGERTIFVKNLNFSTVEEQLEQVFKEAKVGKILSC-KIVKNNENQLSRGYGFVELE 638
Query: 543 AAAAFKGLAYKRYKGVPLYL--EWAPSDVLSQSSTSKGNQK-NDAVVGEHDAKRALLEQQ 599
+ K +A K K + ++ E A +S+ +K +K ND +G+ K L +
Sbjct: 639 S----KEMAEKAIKKLQNFILDEHALKLSISKKDVTKAEKKSNDDQLGKRKEKTEL--SK 692
Query: 600 LEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKN 659
+E D ++S L VKNL F+ D ++++ F + G + ++ K + N K+
Sbjct: 693 VEAQED-------LQSNKLLVKNLAFEATDSDIKELFKTY---GALKKCRLPKKI-NSKS 741
Query: 660 VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD 702
GFGF+EF S E A N + LQ T L G +I++ + D
Sbjct: 742 -HRGFGFVEFVSSEEAKNAFKMLQHTHLYGRKIIIEWAKPEVD 783
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
QE L+S +L V+NL + AT+ +++E F +G + + + ++K +G +V + E
Sbjct: 696 QEDLQSNKLLVKNLAFEATDSDIKELFKTYGALKKCRLPKKINSKSHRGFGFVEFVSSEE 755
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
A A ++L ++ GR + + A+ + E +N +G K +QR
Sbjct: 756 AKNAFKMLQHTHLYGRKIIIEWAKPEVDMGGNE-NNVDVEGNKNKRQR 802
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
RI V NL + + LR+ F GEI D ++ K G+S FAFI + T + A A
Sbjct: 250 RIYVMNLAFTINHEELREKFGPFGEIADIEIPLRKGGQSFGFAFIKYATVEAAVSAYAEL 309
Query: 62 NKSYLDTCRISCEIARKVGDPNMP 85
+K++ ++ A+K +P
Sbjct: 310 DKTFYQGRKLHILPAQKKPPKEIP 333
>gi|401399856|ref|XP_003880652.1| probable RNA-binding protein 19, related [Neospora caninum Liverpool]
gi|325115063|emb|CBZ50619.1| probable RNA-binding protein 19, related [Neospora caninum Liverpool]
Length = 1099
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 230/861 (26%), Positives = 379/861 (44%), Gaps = 183/861 (21%)
Query: 1 SRICVKNLPKYVTEDRLRD-FFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SR+ VKNLP Y+T L+ S GEITD L+R + GKSRQ AF+GF+T+Q+A
Sbjct: 213 SRLIVKNLPPYITTTELKQKLTSLGGEITDVCLLRNERGKSRQCAFVGFKTQQQAANVKD 272
Query: 60 YFNKSYLDTCRISCEIARKVGDP--------NMPRPWSRYSLKKEKEVSEDEKNPVLAAK 111
+F+ +++ T ++ A P P + +K+ SE K+ + K
Sbjct: 273 HFHNTFIHTRKVEISFALPRATPFSSERGKAGADTPGGPKAANAKKQESESAKSALSGKK 332
Query: 112 ----------RGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKV 161
RGE K KV E ++P V V++++ +D +D +A
Sbjct: 333 VVKREELRRGRGEAKGKVKVME-EEPVGARKAGVSS--VRTRVLFDDG-----SDSEASS 384
Query: 162 SENISQAIKGG---EKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFK---SR 215
+N S GG EK +K+ V +Q TE +K DE D+ + + +R
Sbjct: 385 GQNAS----GGSEDEKKDKKRTGGEKAAVSETAQGTENAKIGDDDE-ADDLAWLRQQSAR 439
Query: 216 VKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDAN 275
++ SD ++ D G D+DD S+ +G + A
Sbjct: 440 AAREESDFKAND---GQDEDD-------------------------LHSMSTGPSKAQA- 470
Query: 276 GEIVDPGNPSSSSKDVQQEVLES-GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDK 334
GE +D + ++++ +L S GRL ++NLP+ DELR ++G V+E H+VVD+
Sbjct: 471 GEGLDTSG-GTKNEELDFALLGSHGRLLIQNLPFATAVDELRALCEEYGEVAEAHLVVDE 529
Query: 335 DTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR-------------HKKSS 381
+T++ +G +V + PE A A+ L+ SIFQGRLL PAR ++ +
Sbjct: 530 ETRKPRGFGFVTFVFPEHAVAALPRLNGSIFQGRLLGAFPARPDTTRERRLQLREERRLA 589
Query: 382 DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSD 441
+++L S+ + K + ++ER A E K WN L++ ++ + + + K+
Sbjct: 590 RQKKLAGSSYKARKLEQLVNQDERFAEE-----KVWNLLYVSANSAADAVLTELQADKAA 644
Query: 442 LL--------------DREA-----NDLAVRIALGETQVIAETKKALTNAGVNVSSLEE- 481
LL D A N A +AL E ++ +TK + G+++ + E
Sbjct: 645 LLLDGEDGGRKGKVLKDEGANVAGKNTAAATVALMEAHLLNQTKAWIKAEGISLQAFERR 704
Query: 482 ---------------------FSAGKTDG---------------------LKRSNHVFLV 499
AGK G RS +V
Sbjct: 705 GNTLLTAAYRQNNERGQNGSCLDAGKDTGDSRTASSCGGRGDAEDGGGSDCTRSRDTLIV 764
Query: 500 KNLPYDSSEG-ELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGV 558
K+LP +G EL ++F + G L + +L +KT+A+V + +A AF+ LAY++YK V
Sbjct: 765 KHLPTAHVDGAELLRLFERVGPLARFLLAPSKTVAIVQYEREKDAEVAFRRLAYRQYKNV 824
Query: 559 PLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLE--QQLEGVTDADID--PDRVE 614
PL+LE AP +V + + A AK+ ++ ++L G DA D + V+
Sbjct: 825 PLFLEKAPVNVFVEREEEMQAARKRAAEEVRAAKKRKVKDIEELIG-NDATGDDFEEEVQ 883
Query: 615 SRSLFVKNLNFKTCDENLRKHFG--EHIKEGRILSVK------VKKHLKNG------KNV 660
SLFVKN+NF T + L F ++ ++++ K +NG ++
Sbjct: 884 GVSLFVKNVNFSTSEATLNDVFAGCPGLRRTKLMTKKKAITSNATGSTENGDDPQSAASL 943
Query: 661 SMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV-------------- 706
SMG+ F+EFDS A C+ +QG ++D H L + + A + V
Sbjct: 944 SMGYAFVEFDSAANALAACKRMQGVVVDDHVLQISISRASGAHRRVPGTGAKARGGASSA 1003
Query: 707 KKAEKDKSSTKLLVRNVAFEA 727
S K+LV+N+AF+A
Sbjct: 1004 GGKGHQAQSNKVLVKNLAFQA 1024
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+S ++ V+NL + A+ +LR FS +GNV+ V I + RS+G A+V +A + A A
Sbjct: 1011 QSNKVLVKNLAFQASASDLRGLFSAYGNVTRVCIPRQHEG-RSRGFAFVDFATKQEAQNA 1069
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQEL 386
++ L S GR L + PA + S K +
Sbjct: 1070 VDALSGSHLYGRRLVLEPANQEHVSKKAAI 1099
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKNL + LR FS G +T + R +G+SR FAF+ F T+QEA+ A+
Sbjct: 1013 NKVLVKNLAFQASASDLRGLFSAYGNVTRVCIPRQHEGRSRGFAFVDFATKQEAQNAVDA 1072
Query: 61 FNKSYLDTCRISCEIA 76
+ S+L R+ E A
Sbjct: 1073 LSGSHLYGRRLVLEPA 1088
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
+ +S + VKNL F+ +LR F + G + V + + + S GF F++F +
Sbjct: 1009 QAQSNKVLVKNLAFQASASDLRGLFSAY---GNVTRVCIPRQHEG---RSRGFAFVDFAT 1062
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKA 709
+ A N L G+ L G L+L+ + E V KKA
Sbjct: 1063 KQEAQNAVDALSGSHLYGRRLVLEPAN---QEHVSKKA 1097
>gi|326930082|ref|XP_003211181.1| PREDICTED: probable RNA-binding protein 19-like [Meleagris
gallopavo]
Length = 746
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 205/734 (27%), Positives = 347/734 (47%), Gaps = 92/734 (12%)
Query: 14 EDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRISC 73
EDR R F+ G +TD L TKDGK R+F FIG+++E EA+ A+ +FN+S++DT R++
Sbjct: 3 EDRFRKLFAAFGTLTDCCLKFTKDGKFRKFGFIGYKSEDEAQAALSHFNRSFIDTSRVTV 62
Query: 74 EIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEKV--TEN-----DD 126
E+ + GDP+ P+ WS++S + + EK +AA KK +K +EN +D
Sbjct: 63 ELCKSFGDPSKPKAWSKHSQRVPALEEQPEKPVTIAAPASTKKDKKKKNPSENFKELEED 122
Query: 127 PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKGGEKSITLHVKSDKS 185
EFL V Q R + WANDTL+ +K+K V++ ++ E + D S
Sbjct: 123 KTFQEFLVVHQKRSQVATWANDTLVEEPKKEKSKPVADYLN--FDSDESEDLSEEEKDGS 180
Query: 186 NVITDSQATEKSKNAAAD----ELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEE 241
D + T+ K E +SDMDY KS+V +D S S D ++ + E
Sbjct: 181 ESPEDEEETKAKKQQEKKAATREDLSDMDYLKSKVVRDSSSYSSSSAEEETDSEEVEEES 240
Query: 242 EEEEE--NDHNGDSNEE-CDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLES 298
+ E+ ++ G E+ S +++ EE ++ SS+ V
Sbjct: 241 KNEDSGITENIGTHTEKRRKSKPQEAEQETPAEEKKKRSTLEKNQVSSAEASTPHTVKLC 300
Query: 299 GRLFVRNLPYTATEDELREHFSKF----------------GNVSEVHIVVDKDTKRSKGI 342
G P TE ++RE FS G +SE+H +D+ TK+ KG
Sbjct: 301 G------APLNITEQKIREFFSPLKPVAIRIGKNAQGKNTGPLSEIHFPIDRLTKKPKGF 354
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRRE 402
A++ Y IPE A +A +D +FQGR++H++P+ K K++L ++ ++ + + K+++E
Sbjct: 355 AFITYMIPEHAVKAYAEMDGQVFQGRMMHLLPSIIK----KEKLEDTDAEESSSYKKQKE 410
Query: 403 EERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND-LAVRIALGETQV 461
+ KAS AS + WN+LF+ + V + IA+K+ SKS +LD E+ D +AVRIALGET++
Sbjct: 411 AKDKASSASSHN--WNTLFVGTNAVADAIAQKYNASKSQVLDHESRDSVAVRIALGETEL 468
Query: 462 IAETKKALTNAGVNVSSL---------EEFSAGKTDGLKRSNH-------VFLVKNLPYD 505
+ E ++ L GV++ S EE SA + + + +KNL +
Sbjct: 469 VQEIRRFLIENGVSLDSFNGDTTVKVSEETSAQDEEEDEDEDEEETIPGCTLFIKNLNFT 528
Query: 506 SSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
++E L + F K G++ + K A + + F + YK+ +G L
Sbjct: 529 TTEDTLKETFSKVGAVKSCTISKKKNKAGTLL------SMGFGFVEYKKPEGAQKAL--- 579
Query: 566 PSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDAD---IDPDRVESRSLFVKN 622
Q +V H + + E+ + + + ++ + V+N
Sbjct: 580 -------------RQLQGCIVDGHKLEVKISERAVRPAVKSSRKKQTVKKQKTSKILVRN 626
Query: 623 LNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDL 682
+ F+ +R+ F G + +V++ K + G GFGF++F + + A L
Sbjct: 627 IPFQATVREIRELFSTF---GELKTVRLPKKMA-GTGSHRGFGFVDFLTKQDAKKAFNAL 682
Query: 683 -QGTILDGHALILQ 695
T L G L+L+
Sbjct: 683 CHSTHLYGRRLVLE 696
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 69/121 (57%), Gaps = 18/121 (14%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETA 675
+LF+KNLNF T ++ L++ F K G + S + KK K G +SMGFGF+E+ E A
Sbjct: 519 TLFIKNLNFTTTEDTLKETFS---KVGAVKSCTISKKKNKAGTLLSMGFGFVEYKKPEGA 575
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKD---------KSSTKLLVRNVAFE 726
R LQG I+DGH L +++ E+ V+ A K + ++K+LVRN+ F+
Sbjct: 576 QKALRQLQGCIVDGHKLEVKI-----SERAVRPAVKSSRKKQTVKKQKTSKILVRNIPFQ 630
Query: 727 A 727
A
Sbjct: 631 A 631
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P T +R+ FS GE+ +L + G R F F+ F T+Q+A++A
Sbjct: 620 SKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAF 679
>gi|296412291|ref|XP_002835858.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629654|emb|CAZ80015.1| unnamed protein product [Tuber melanosporum]
Length = 772
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 191/655 (29%), Positives = 307/655 (46%), Gaps = 120/655 (18%)
Query: 125 DDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVS--------------ENISQAIK 170
+D + EFL+VMQP+ SK+W N L+ D + S E+I K
Sbjct: 81 NDLKFKEFLEVMQPKSMSKIWGNGDLVSFSQDVGVQASQLDFVGVEGSAGEYEDIPARKK 140
Query: 171 GGEKSITL-------------------------HVKSDKSNVITDSQATEKSKNAAADEL 205
G S T+ + + + I+D++ +SK + +L
Sbjct: 141 GPGSSNTMARDVDYNRHQSPLMDRMQLGDGELYNTADEGATGISDAEWL-RSKTSRLLDL 199
Query: 206 MSDMDYFKSRV------KKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDS 259
M D++ +RV K+D + D+ ++ +D+ EE EE + + + E +
Sbjct: 200 MDDVESRLARVSEIGNTKRDTKKTNEVDEEEEEEKEDNQAEEANEERSGQSNHAKPETE- 258
Query: 260 IIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHF 319
+IH+ + +SGRLF+RNL Y++TE +LR++F
Sbjct: 259 ---QAIHA---------------------------ISQSGRLFLRNLSYSSTEGDLRQYF 288
Query: 320 SKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKK 379
+ +G++ EVH+ VD T SKG AY+LY P+ A +A + LD IFQGRLLH++ A K+
Sbjct: 289 APYGDLEEVHLPVDNKTHLSKGFAYILYKNPQHAVQAYQSLDRKIFQGRLLHILAASPKR 348
Query: 380 SSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSK 439
E + SQ LK++RE +RKA+ AS +T WNS++M D V+ ++A + GVSK
Sbjct: 349 EHKLDEY--AISQ--LPLKKQREIKRKATAAS-STFNWNSMYMNADAVISSVADRLGVSK 403
Query: 440 SDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLV 499
++LLD ++D AVR A ET VI +TK + G+++ + E+ ++ + L
Sbjct: 404 AELLDPTSSDAAVRQAHAETHVIQDTKAYFSQHGMDLKAFEK--------REKDDKTILF 455
Query: 500 KNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVP 559
KN PY + ++ + FG ++++P T+A+V F++ A AAF K
Sbjct: 456 KNFPYGTRTEDIHNLVEPFGKTARMLMPPAGTIAVVEFIDAPAARAAFANPTPK------ 509
Query: 560 LYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLF 619
+ AP + AV D K + + L T D + +LF
Sbjct: 510 --IVDAP-------------KIPAAVALGKDPKVSATDLLLPAHTSTATDEAEAGTSTLF 554
Query: 620 VKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNV 678
V+NLNF T L + F + I VK K KN G +SMGFGF EF S
Sbjct: 555 VQNLNFTTTTAKLTELF-KPINGFLSARVKTKPDPKNPGGTLSMGFGFAEFRSKTDGMAA 613
Query: 679 CRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS---STKLLVRNVAFEAQRK 730
L G +LDGH L ++ + + ++KS TK++++N+ FEA ++
Sbjct: 614 MAALNGYVLDGHKLSIK----PSQKHTSPSSSQEKSIAKRTKIIIKNLPFEASKR 664
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP ++ LR FS G + ++ + G +R F F F T +EA+ A+
Sbjct: 650 TKIIIKNLPFEASKRELRALFSAYGTLRSVRVPKKFGGATRGFGFADFATAREAQGAMDA 709
Query: 61 FNKSYLDTCRI 71
++L R+
Sbjct: 710 LKDTHLLGRRL 720
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
+PSSS ++ + + ++ ++NLP+ A++ ELR FS +G + V V K ++G
Sbjct: 637 SPSSSQ---EKSIAKRTKIIIKNLPFEASKRELRALFSAYGTLRSVR-VPKKFGGATRGF 692
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLL 370
+ +A A A++ L ++ GR L
Sbjct: 693 GFADFATAREAQGAMDALKDTHLLGRRL 720
>gi|170110064|ref|XP_001886238.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638822|gb|EDR03097.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 496
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 227/407 (55%), Gaps = 24/407 (5%)
Query: 330 IVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNS 389
+ +D T++ KG+AYV +A P +A +A E LD FQGRLLH++ A +K K E+ +
Sbjct: 1 MPLDATTRQPKGLAYVSFAQPANALQAYEALDRKSFQGRLLHILAAVDRKG--KVEVEDG 58
Query: 390 TSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND 449
+ KT+K+ + ++RKA+ +G W+ L+M D V +IA + ++K+D+L+ E+ D
Sbjct: 59 DGR-KKTMKEEKNQKRKAN--AGKQFNWSMLYMNSDAVASSIADRMNINKADILNPESGD 115
Query: 450 -LAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSE 508
AV++AL ET +I ETK L + GV +SS + RS+ LVKN+PY ++
Sbjct: 116 NAAVKLALAETHIIQETKTYLESQGVLLSSFGSRA--------RSDTTILVKNIPYGTTV 167
Query: 509 GELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSD 568
++ +MF G L +V++P T+A+V F +P +AA AF+ +AY+R +YLE P
Sbjct: 168 EQIREMFEPHGELSRVLVPPAGTMAVVDFEKPDDAAQAFRAVAYRRLGSTVVYLEKGPLG 227
Query: 569 VLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVES--RSLFVKNLNFK 626
+ ++ ST + G A + EQQ+ T + ++ S +L++KN+ F
Sbjct: 228 MFAEGSTPAA----PSTTGPSHAAIKIAEQQIPDPTAEGEEEEQSISGGTTLYLKNIAFS 283
Query: 627 TCDENLRKHFGEHIKEGRILSVKVKKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGT 685
T E L + F H+ ++ K K G +SMG+GF+ F E+A + +QG
Sbjct: 284 TTQERLTQVFC-HLPAFSFARIQTKPDPKRPGSRLSMGYGFVGFKDAESARKALKSMQGF 342
Query: 686 ILDGHALILQLCHAKKD--EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
LDGHAL ++ D E+ V K K ++TK++V+NV FEA +K
Sbjct: 343 SLDGHALHVKFAGRGADEVEKEVVKGSKSTTTTKMIVKNVPFEATKK 389
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P T+ +RD F G + +L + D ++R FAF+ F + +EAE A
Sbjct: 375 TKMIVKNVPFEATKKDIRDLFGAHGHLKSVRLPKKFDARTRGFAFLDFVSRREAENAYDA 434
Query: 61 FNKSYLDTCRISCEIA 76
++L + E A
Sbjct: 435 LRHTHLLGRHLVLEWA 450
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLA 551
+VKN+P+++++ ++ +FG G L V LP T+ A + F+ EA A+ L
Sbjct: 377 MIVKNVPFEATKKDIRDLFGAHGHLKSVRLPKKFDARTRGFAFLDFVSRREAENAYDALR 436
Query: 552 YKRYKGVPLYLEWA 565
+ G L LEWA
Sbjct: 437 HTHLLGRHLVLEWA 450
>gi|320593340|gb|EFX05749.1| pre-rRNA processing protein [Grosmannia clavigera kw1407]
Length = 970
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 156/457 (34%), Positives = 236/457 (51%), Gaps = 35/457 (7%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
++ E+ RLF+RNLPY ATE + ++F FG V EV++ V + +KG A VL+A SA
Sbjct: 371 QIRETSRLFIRNLPYDATEAHIWKYFETFGPVKEVNLPV-TNAGANKGFAMVLFATAASA 429
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHN-STSQGTKTLKQRREEERKASEASG 412
A + D FQGR+LHV+PA+ KKS+ + + SQ ++ RK EA+
Sbjct: 430 LAAFQNGDGKTFQGRILHVLPAKAKKSATDVAMDEFAISQMPLKKQK---LLRKKQEAAT 486
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNA 472
+T +WN+LFM D V +A + GVSKS++LD ++ AVR A+ +T +I ET+
Sbjct: 487 STFSWNALFMSQDAVNAAVAERLGVSKSEMLDPTSSGEAVRQAVRQTSIIEETRSYFAAN 546
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTL 532
GV++ + + KR + LVKN Y +S E+ MF +FG + +V++P+ T+
Sbjct: 547 GVDLDMFKPHT-------KRGDRCILVKNFAYGTSSQEIRSMFEEFGPVVRVLMPTGGTI 599
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
A+V F + A+ LAY+R L LE P ++ S + G D VG +D K
Sbjct: 600 AIVQFAQAAHGRLAYSRLAYRRVNDTVLMLEKCPENLFGDS--THGQTLQDTEVGANDQK 657
Query: 593 ----------RALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE--HI 640
LL +Q+E D + SLFV+NLNF T E L F
Sbjct: 658 AKTKRPKVTASELLGEQVETEDVDDAADTEATTSSLFVRNLNFTTTTEQLAGAFSSLAGF 717
Query: 641 KEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
R+ S K K G+ +SMG+GF+EF + TA + + G IL GH L +Q H
Sbjct: 718 VSARVNSKPNTK--KPGETLSMGYGFVEFRTKATAAAAGKAMDGFILHGHTLTVQAAHRG 775
Query: 701 KDEQVVKKAEKDK-------SSTKLLVRNVAFEAQRK 730
+ + ++ E D+ +KL+++N+ FEA K
Sbjct: 776 QQDAAAERRESDRKRKQAANGGSKLIIKNLPFEATPK 812
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 92/158 (58%), Gaps = 10/158 (6%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
RI VKNLP +TE+ LR FS G ITD KL+ R+ AF+G+RT +EA+ A++Y
Sbjct: 24 RIFVKNLPPNITEESLRKHFSSGGRHITDVKLI-----TRRRIAFLGYRTAEEAKSAVRY 78
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FN+SY+ ++ E+A+ +GD ++P S + +E ++++ V + +++ +++
Sbjct: 79 FNRSYIRMSKLFVEVAKPIGDLSLPGASSLKRPYEGQEAAQEDPQKVAEEDQSKRRKLDE 138
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQK 158
DP+L EFL+VM+P+ + + + M D +
Sbjct: 139 A----DPKLREFLEVMKPQHGRGISSTADVFAAMGDSQ 172
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 26/146 (17%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
++KNLP++++ ++ + +G + V LP T+ A FL EAA A L
Sbjct: 800 LIIKNLPFEATPKDVRTLLSTYGQVKAVRLPRKVGNGTRGYAFAEFLTASEAAHAMDALR 859
Query: 552 YKRYKGVPLYLEWAPSDVLS---------------------QSSTSKGNQKNDAVVGEHD 590
G L L++A ++ L Q T+ Q+ +GE
Sbjct: 860 DTHLLGRRLVLQYAEAEALDPEEELAKMRKKVGSQMNTVALQQLTTGRRQRTKVHIGEEG 919
Query: 591 AKRALLEQQLEGVTDADIDPDRVESR 616
A+ ++E G T I+ +RV R
Sbjct: 920 AEEGIVEPAKPGRTAGQIEKERVSLR 945
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 300 RLFVRNLPYTATEDELREHFSKFG-NVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
R+FV+NLP TE+ LR+HFS G ++++V ++ T+R IA++ Y E A A+
Sbjct: 24 RIFVKNLPPNITEESLRKHFSSGGRHITDVKLI----TRRR--IAFLGYRTAEEAKSAVR 77
Query: 359 VLDNSIFQGRLLHV 372
+ S + L V
Sbjct: 78 YFNRSYIRMSKLFV 91
>gi|323449244|gb|EGB05134.1| hypothetical protein AURANDRAFT_1296 [Aureococcus anophagefferens]
Length = 464
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 213/430 (49%), Gaps = 55/430 (12%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
RL+V NLPY A+E+E+ +FS G VSEVH + K+T+ G A+V + +P +A A
Sbjct: 14 ARLYVANLPYDASEEEILAYFSPHGTVSEVHQPLSKETRAPLGFAFVTFVLPTAAEAATA 73
Query: 359 VLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWN 418
LD + F+GR L V +++KQ ++ + +T +RRE+ERK + +
Sbjct: 74 SLDGASFRGRALSVA------AAEKQRKSSADDRAPRTFSERREQERKKKALAASHGELR 127
Query: 419 SLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSS 478
+R D V A + G SK++L + AV +AL E V AET + G ++
Sbjct: 128 G-HVRSDAVAAAAAAQLGASKAELFKASGSGTAVNLALAEATVQAETLAYFRDRGYDL-- 184
Query: 479 LEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFL 538
D RS LVKNLP D+S EL KMF G + V+L ++T A+V F
Sbjct: 185 ---------DADARSRRSVLVKNLPADASAAELRKMFAPHGVVHDVLLAPSRTTAVVEFE 235
Query: 539 EPVEAAAAFKGLAYKRYKGVPLYLEWAP--SDVLSQSSTSKGNQKNDAVVGEHDAKRALL 596
EP EA AAFK LAY+R++ VPLYL WAP SD + +S A
Sbjct: 236 EPSEARAAFKKLAYRRFRHVPLYLGWAPEKSDAAPAAPSSTVPDAAAADD---------D 286
Query: 597 EQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKN 656
E+ EG T +FVKNLNFKT LR HF L +
Sbjct: 287 EEVHEGAT-------------VFVKNLNFKTTAAALRAHFSAFGVRACSLPA------AD 327
Query: 657 GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSS- 715
G+ + G+GF+EFD + A + LDGHAL L+L K + + + K+S
Sbjct: 328 GERNNRGYGFLEFDGADDARAAIATTR--PLDGHALGLELSKRK----IARAPDAKKTSK 381
Query: 716 TKLLVRNVAF 725
TKL+VRN+AF
Sbjct: 382 TKLVVRNLAF 391
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 488 DGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST-----KTLALVVFLEPVE 542
D K S +V+NL + ++ ++F FG+L KV LP + A V F P +
Sbjct: 375 DAKKTSKTKLVVRNLAFAVVVNDVKQLFEAFGALKKVRLPKRFDGRHRGFAFVEFTNPRD 434
Query: 543 AAAAFKGLAYKRYKGVPLYLEWAPSD 568
AAAA L G L ++WA D
Sbjct: 435 AAAARSSLKSAHLYGRHLVIDWADPD 460
>gi|449018190|dbj|BAM81592.1| probable RNA binding protein Mrd1p [Cyanidioschyzon merolae strain
10D]
Length = 815
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 243/470 (51%), Gaps = 39/470 (8%)
Query: 285 SSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAY 344
S +S + ++ S R+F+RNL + T ++L + FG + +VH+V D+++ +S+G +
Sbjct: 298 SMASASKEWKLCRSSRIFIRNLGFNVTFEDLEKLLEPFGELEDVHLVRDRESGQSRGFGF 357
Query: 345 VLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLK-----Q 399
+ SA +A++ LD S++QGRLLH+MP+ +D+ EL +S T+ + +
Sbjct: 358 ARFKTVTSAQQAMDALDGSVYQGRLLHIMPS----EADRYELDQRSSLETEGKRRSFSVE 413
Query: 400 RREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND----LAVRIA 455
R+ + R+ + + +T +WN F+ D V+E A + +SK+ L +A + AVR+A
Sbjct: 414 RKRQRRREAGTTKDTISWNPFFLGTDGVLETTAERFQMSKARFLGTDALEGGISAAVRLA 473
Query: 456 LGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKR---SNHVFLVKNLPYDSSEGELA 512
+ E+ ++ E ++AL +G+NV +L + + L R S ++KNLP ++ +L
Sbjct: 474 VAESSLLYEVREALAESGINVQALLDEQTRQRRALDRKQLSRTTIILKNLPARTTSADLG 533
Query: 513 KMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ 572
G++G L ++++ +A FL+ +A AAF+GLAY RY +PLYLEWAP + +
Sbjct: 534 PKLGRYGQLGRLVVAPGGLIAFAEFLDENQAKAAFRGLAYTRYADLPLYLEWAPRGIWAD 593
Query: 573 SSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENL 632
+ G+ +A + +A G + P+ ++ SL ++NL+ T L
Sbjct: 594 PTPPNGDDIAEA------SPKAYASVDDSGSGSEEPPPNWSQT-SLLIRNLSLDTTSGML 646
Query: 633 RKHFGEHIKEGRILSVKVKKHLKN----GKNVSMGFGFIEFDSVETATNVCRDLQGTILD 688
+H RI+ + + + + N+ + F EF + + A L G+ L
Sbjct: 647 VEHLESLGVRPRIVRIPLDEETPSMDSRSPNIPSKYAFAEFATCKEAWRALHILDGSALR 706
Query: 689 GHALILQLCHAKKDEQVVKKAEKDKSS--------TKLLVRNVAFEAQRK 730
GH +L A ++ V + +++ TKL+++N+AFEA ++
Sbjct: 707 GH----RLSAAPSEKHVTSRVAASETAVVPEAGNETKLIIKNIAFEASKR 752
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK Y++E+RLR FS+ G++TD ++ RT G+SR+F F+G+RT EA A +
Sbjct: 56 SRLIVKGFASYISEERLRAHFSRLGDVTDVRVSRTASGRSREFGFVGYRTPAEAAAAKAF 115
Query: 61 FNKSYLDTCRISCEIARKVGDPNM 84
F++++LDT RI+ E A P +
Sbjct: 116 FDQTFLDTRRITVEYALPPRSPAL 139
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 285 SSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAY 344
++S V E +L ++N+ + A++ EL + FS FG+V + + D +G +
Sbjct: 724 AASETAVVPEAGNETKLIIKNIAFEASKRELHQLFSSFGHVKSLRLPKKVDGS-GRGFCF 782
Query: 345 VLYAIPESASRAIEVLDNSIFQGRLLHV 372
V YA P+ +RA ++ + F GR L V
Sbjct: 783 VEYATPQETARATALVQGTHFYGRKLVV 810
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E+ RL V+ +E+ LR HFS+ G+V++V V + RS+ +V Y P A+ A
Sbjct: 54 ENSRLIVKGFASYISEERLRAHFSRLGDVTDVR-VSRTASGRSREFGFVGYRTPAEAAAA 112
Query: 357 IEVLDNSIFQGRLLHV---MPARHKKSSDKQELHNSTS 391
D + R + V +P R ++++ H S
Sbjct: 113 KAFFDQTFLDTRRITVEYALPPRSPALAERKRFHAEVS 150
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
SRI ++NL VT + L GE+ D L+R ++ G+SR F F F+T A++A+
Sbjct: 312 SRIFIRNLGFNVTFEDLEKLLEPFGELEDVHLVRDRESGQSRGFGFARFKTVTSAQQAMD 371
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIE 119
+ S + MP RY L + + + K + +R ++ E
Sbjct: 372 ALDGSVYQGRLLHI----------MPSEADRYELDQRSSLETEGKRRSFSVERKRQRRRE 421
Query: 120 KVTEND 125
T D
Sbjct: 422 AGTTKD 427
>gi|242077148|ref|XP_002448510.1| hypothetical protein SORBIDRAFT_06g028205 [Sorghum bicolor]
gi|241939693|gb|EES12838.1| hypothetical protein SORBIDRAFT_06g028205 [Sorghum bicolor]
Length = 184
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/162 (60%), Positives = 125/162 (77%), Gaps = 9/162 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+CVKNLPK V E RLR+ FS+KGE+TDAK++RTKDGKSRQFAFIG+RT ++AEEA+KY
Sbjct: 15 SRLCVKNLPKGVDERRLREVFSRKGEVTDAKVIRTKDGKSRQFAFIGYRTNEDAEEALKY 74
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNP--VLAAKRGEKK-- 116
FN +Y+DTC+I+CE+ARK+GDP+ PRPWSR+SLKK + S+D+ N V A +G K
Sbjct: 75 FNNTYIDTCKITCEVARKIGDPDAPRPWSRHSLKKPEYGSKDKNNAGTVDAPPKGSKAQG 134
Query: 117 -----TIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGL 153
+ K + DDP+ LEFL+ MQPR K+KMWANDT L
Sbjct: 135 TSAHVSGSKGSVPDDPKFLEFLEAMQPRSKAKMWANDTAATL 176
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S RL V+NLP E LRE FS+ G V++ ++ KD K S+ A++ Y E A A+
Sbjct: 14 SSRLCVKNLPKGVDERRLREVFSRKGEVTDAKVIRTKDGK-SRQFAFIGYRTNEDAEEAL 72
Query: 358 EVLDNSIF 365
+ +N+
Sbjct: 73 KYFNNTYI 80
>gi|156084440|ref|XP_001609703.1| RNA-binding protein P22H7.02c [Babesia bovis T2Bo]
gi|154796955|gb|EDO06135.1| RNA-binding protein P22H7.02c, putative [Babesia bovis]
Length = 702
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 255/487 (52%), Gaps = 78/487 (16%)
Query: 288 SKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDK--DT-----KRSK 340
++DV E L+ R+ + NLPY TE +RE FG ++EVH+ ++K DT K +K
Sbjct: 180 NEDVDPESLD--RVVIFNLPYNVTESAIRELCRPFGPITEVHLPLNKSLDTDSTQDKLTK 237
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK------------QELHN 388
G YV + P A + + + SIF GR++HV A+ +KSS +E H
Sbjct: 238 GYCYVTWVFPSDAIKFRDAKNRSIFCGRIIHVDLAKPRKSSASDGSTYDILNRRIRERHA 297
Query: 389 STSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN 448
S + L+++R+ SG + WN+L + + V ++R+ + K +++D N
Sbjct: 298 EKSSYKRQLQKKRQS------TSGESSIWNTLHIDINATVAAVSRELELQKKEVMDE--N 349
Query: 449 DLAVRIALGETQVIAETKKALTNAGVNVSSLE------EFSAGKTDGLKRSNHVFLVKNL 502
AV +AL ET V+ E + L G++ + + + ++RS+ ++KNL
Sbjct: 350 SAAVNVALTETLVLNELTRWLDEQGIDYKRFQVQKDTDDAGSEAVTEVQRSDDTIIIKNL 409
Query: 503 PYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYL 562
+S E EL ++F ++G+L ++ + + + +V +++P A+ AFK +AY+ YKG+P+Y+
Sbjct: 410 SKESCEHELVELFSQYGTLMRLSISPYQVMGIVQYIDPKCASTAFKKMAYRPYKGLPIYV 469
Query: 563 EWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALL-----------EQQLEGVTDADIDPD 611
EWAP + + DA R +L ++++ TD DPD
Sbjct: 470 EWAPVKLFHE-----------------DAPRPVLATTPTTLDPKPTEEVDYFTDTVGDPD 512
Query: 612 RVES-----RSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGF 666
+ S+++KNL+FKT ++ L+ HFG +G I S K LK+ +S GFGF
Sbjct: 513 MEHASLGSNTSVYIKNLHFKTRNDALQHHFGSC--KGYITS---KVLLKDNDTLSRGFGF 567
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKD---KSSTKLLVRNV 723
+EFDS+ A R G I+DG ++++ AK+ ++ V + + K+++K++V+N+
Sbjct: 568 VEFDSLVNAKAAIRAKTGLIIDGK--VIEMSIAKRVDKPVAEVPEHKLLKATSKIIVKNL 625
Query: 724 AFEAQRK 730
AF+A ++
Sbjct: 626 AFQATKQ 632
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTK-RSKGIAYVLYAIPESASRA 356
+ ++ V+NL + AT+ +L + FS +GNV V I K K ++G A+V Y+ + ++RA
Sbjct: 617 TSKIIVKNLAFQATKQDLYKLFSFYGNVKSVRI--PKSLKSNNRGFAFVEYSSKQESARA 674
Query: 357 IEVLDNSIFQGRLL 370
+E L +S GR L
Sbjct: 675 VESLQHSHLYGRHL 688
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 27/121 (22%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-----EITDAKLMRTKDGK------------SRQF 43
+R+ +KNLP + E + + SQK E TD KL+ TK GK SR
Sbjct: 7 TRLLIKNLPLSLDEAQTQRLISQKCKDIGLEFTDCKLL-TKSGKGKTKSILGDETVSRGL 65
Query: 44 AFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDE 103
F+GF E +A + ++N +Y +++ E + RP+SR E E
Sbjct: 66 CFVGFADEADATKFKDFYNGTYFRAAKVTIEYS---------RPFSRLPYATEAPTESSE 116
Query: 104 K 104
+
Sbjct: 117 R 117
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ VKNL F+ ++L K F + G + SV++ K LK+ GF F+E+ S + +
Sbjct: 620 IIVKNLAFQATKQDLYKLFSFY---GNVKSVRIPKSLKSNNR---GFAFVEYSSKQESAR 673
Query: 678 VCRDLQGTILDGHALILQLCHAKKDE 703
LQ + L G L+L+ A++DE
Sbjct: 674 AVESLQHSHLYGRHLVLEF--AEEDE 697
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S+I VKNL T+ L FS G + ++ ++ +R FAF+ + ++QE+ A++
Sbjct: 618 SKIIVKNLAFQATKQDLYKLFSFYGNVKSVRIPKSLKSNNRGFAFVEYSSKQESARAVES 677
Query: 61 FNKSYLDTCRISCEIA 76
S+L + E A
Sbjct: 678 LQHSHLYGRHLVLEFA 693
>gi|353238423|emb|CCA70370.1| probable RNA-binding protein [Piriformospora indica DSM 11827]
Length = 799
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 230/479 (48%), Gaps = 77/479 (16%)
Query: 287 SSKDVQQEVLES-GRLFVRNLPYTATEDELREHFSKFGNV------------SEVHIVVD 333
S D + +E+ GRLFVRNL ++ T+DEL HFS FG + S+VHI VD
Sbjct: 259 SPVDANRAAIETNGRLFVRNLVFSCTQDELTAHFSPFGPIEQLQFTSAELTHSQVHIPVD 318
Query: 334 KDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQG 393
++ KG AYV + A A E LD + FQGRLLH++PA + + E N+++
Sbjct: 319 AESN-PKGFAYVRFKDASHAVAAYEALDKTSFQGRLLHILPAIDR--VPRTENSNASNNP 375
Query: 394 TKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA---NDL 450
K LK RE++RK E SG W L+M D+L+ ++
Sbjct: 376 MK-LKAMREQKRK--ENSGKDFNWAILYMNAXXXX---------XXXDILNPDSEVGGSP 423
Query: 451 AVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
AV++AL ET +IAETKK L V++S + + RS + LVKN+PY +S E
Sbjct: 424 AVKLALAETHIIAETKKYLEQHNVDLSLFSQHR------IPRSKTIILVKNIPYGTSSSE 477
Query: 511 LAKMFGKFGSLDKVILPSTKTLALVVFLEPV--EAAAAFKGLAYKRYKGVPLYLEWAPSD 568
L +MF FGSL +V++P T+A+V F + +A A++ LAYKR K LYLEWAP
Sbjct: 478 LHEMFSAFGSLKQVLMPPAGTIAIVQFPDDAGKQAGDAWRCLAYKRLKDSILYLEWAPQG 537
Query: 569 VLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR---VESRSLFVKNLNF 625
+ D+K+ E D DI D +L V NL+F
Sbjct: 538 LFDGPPL--------------DSKKPAEES-----IDQDIKEDEELAAPGATLHVGNLSF 578
Query: 626 KTCDENLRKHFGEHIKEGRILSVKVKKHL-KNGKNVSMGFGFIEFDSVETATNVC----R 680
T L F H+ V K K G+ +S GFGF+ F VE A R
Sbjct: 579 ATTSTRLASVF-RHLPSFAFAKVATKADPSKPGQVLSQGFGFVGFKDVEAARKAMKGFNR 637
Query: 681 DLQGT---ILDGHALILQLCHAKKDE------QVVKKAEKDKSSTKLLVRNVAFEAQRK 730
GT +LDGH L + +++ ++ K K K TKL+V+N+AFE +K
Sbjct: 638 QANGTGSLVLDGHVLKISFAGRGREDVERDAGGILGKHSKSK-GTKLIVKNLAFEVSKK 695
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 14/88 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG--------------EITDAKLMRTKDGKSRQFAFI 46
SR+ VKNLP Y+TE RLRD FS G ++TD +++ KDG SR+ AF+
Sbjct: 12 SRLIVKNLPTYITEPRLRDHFSATGAAKGNVKGGGGGWGDLTDVRIVHKKDGSSRRIAFL 71
Query: 47 GFRTEQEAEEAIKYFNKSYLDTCRISCE 74
GF+TE+EA+ A +YF+K+YLD R+ E
Sbjct: 72 GFKTEEEAQRAREYFDKTYLDVSRLRVE 99
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKNL V++ L + FS G++ +L D +SR FAF+ F T EAE A+
Sbjct: 681 TKLIVKNLAFEVSKKELWELFSAHGQVKSVRLPNRADRRSRGFAFVDFATRNEAENAMGQ 740
Query: 61 FNKSYLDTCRISCEIARKVGD 81
S+L + E A + D
Sbjct: 741 LRHSHLLGRHLVLEWAEREQD 761
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 17/98 (17%)
Query: 291 VQQEVLES--GRLFVRNLPYTATEDELREHFSKFG--------------NVSEVHIVVDK 334
+Q +L S RL V+NLP TE LR+HFS G ++++V IV K
Sbjct: 2 IQTHLLHSNRSRLIVKNLPTYITEPRLRDHFSATGAAKGNVKGGGGGWGDLTDVRIVHKK 61
Query: 335 DTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
D S+ IA++ + E A RA E D + L V
Sbjct: 62 DGS-SRRIAFLGFKTEEEAQRAREYFDKTYLDVSRLRV 98
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L V+NL + ++ EL E FS G V V + D +RS+G A+V +A A A+
Sbjct: 682 KLIVKNLAFEVSKKELWELFSAHGQVKSVRLPNRAD-RRSRGFAFVDFATRNEAENAMGQ 740
Query: 360 LDNSIFQGRLL 370
L +S GR L
Sbjct: 741 LRHSHLLGRHL 751
>gi|358058378|dbj|GAA95897.1| hypothetical protein E5Q_02555 [Mixia osmundae IAM 14324]
Length = 680
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 147/459 (32%), Positives = 237/459 (51%), Gaps = 52/459 (11%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
P PS + +D ++ L + RLF+RNL +T +L+ F++ G VS VH+V D+D +
Sbjct: 170 PVAPSVAPED--EDTLTTNRLFLRNLAFTVRSSDLQTTFAQHGRVSHVHLV-DEDKTERR 226
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM--PARHKKSSDKQELHNSTSQGTKTLK 398
G+AYV + + A +A LD +I GRLLHVM AR ++ + NS S+G L
Sbjct: 227 GLAYVTFETAKEAEQARSALDGTILHGRLLHVMLAAARPGEADQARPGKNSKSKG---LL 283
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGE 458
RR+ AW+SL M PD V+ +A + GVSK DL+ R + + AVR+AL E
Sbjct: 284 DRRD------------LAWSSLQMTPDAVMATMADRLGVSKDDLVGRGSENAAVRLALAE 331
Query: 459 TQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKF 518
+Q+I E++ AGV++ +L + +S + LVKN+P + L MF
Sbjct: 332 SQLIDESRTYFAKAGVDLLALNKPG-------PKSKTMLLVKNIPAGTQPSALKLMFDAS 384
Query: 519 GSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKG 578
G + V++P + TLA+V F + A A+K LAYKR LYLE AP +++Q
Sbjct: 385 GQVKNVLMPPSATLAIVEFTDVDGANKAYKTLAYKRIGNAVLYLERAPLALVNQPI---- 440
Query: 579 NQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE 638
+ +D V + A+ E Q D + +L+VKNL+F+ E L+ F +
Sbjct: 441 -RDDDDVA---PSVSAIPEGQPSEQPDEN---------TLYVKNLSFQVTSERLQAMFSD 487
Query: 639 HIKEGRILSVKVKKHLKNG---KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
+ R V+++K +G S+G+GF+ FD+ A QG +L+G L+L
Sbjct: 488 -LAGYRFARVQMRKTDVSGVAKTAASLGYGFVGFDTEGNAQAAMTRRQGQLLEGRPLLLA 546
Query: 696 LCHAKKDEQV----VKKAEKDKSSTKLLVRNVAFEAQRK 730
+D + ++++ + ++ L+++NV FE +K
Sbjct: 547 RARRGQDAKGAGGEAQESKAGRPTSTLVIKNVPFEVSKK 585
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQ--KGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+R+ VK + T + L+ FS + +ITD+++ KDG+SR+ AF+GF T ++A A
Sbjct: 4 TRLVVKQVQPTTTAEELKKHFSAHLQVDITDSRIASKKDGRSRRIAFLGFATAEQAALAR 63
Query: 59 KYFNKSYLDTCRISCEIARKVGDPNMP 85
++N +YL +I + A+ P +P
Sbjct: 64 DHYNNTYLSGSKIIVDFAK----PRVP 86
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S + +KN+P V++ L+ F G I ++ R D +R FAF+ FR+ EA+EA +
Sbjct: 571 STLVIKNVPFEVSKKELQALFKSYGNIKSLRMPRKADRHTRGFAFVEFRSTAEAKEAKQA 630
Query: 61 FNKSYLDTCRISCEIAR-----KVGDPNMPRP 87
++++L + E + + D PRP
Sbjct: 631 LSQTHLLGRHLVIEYGQADQGASLRDDKRPRP 662
>gi|170595572|ref|XP_001902435.1| RNA recognition motif. [Brugia malayi]
gi|158589895|gb|EDP28716.1| RNA recognition motif [Brugia malayi]
Length = 579
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 165/279 (59%), Gaps = 16/279 (5%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
++LE+GRLFVRNLPY ++++LR F K+G +S++ ++V K T KG A V Y PESA
Sbjct: 271 KILETGRLFVRNLPYVCSDEDLRYLFKKYGEISDLQMIVSKKTGLCKGFAIVTYVFPESA 330
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHN-STSQGTKTLKQRREEERKASEASG 412
A LD SI +GR+LH++P K+ ++ ++ S Q TK K ++E +G
Sbjct: 331 VAAFSALDGSILKGRMLHILPGEEKREIEQIDITGKSAFQKTKVAKLKKE--------AG 382
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLA-VRIALGETQVIAETKKALTN 471
+ +WN+LF+ + V E +A K V KSDLL + A VR+AL ET++++ET++ L
Sbjct: 383 KSHSWNTLFLGANAVAETLAEKLDVEKSDLLLGQGEISAGVRMALAETRLVSETREYLLA 442
Query: 472 AGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT 531
G+ L+ FS T KRSN V ++KNL EL +MF + G + ++++P
Sbjct: 443 NGI---CLDVFSRPAT---KRSNTVIIIKNLTTKVDTEELKRMFARHGPVKQLLMPPGGI 496
Query: 532 LALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
A++ V+A AF LAY R++ PL+LEWAP D+
Sbjct: 497 TAILEMENSVDAQKAFNTLAYARFRSQPLFLEWAPYDLF 535
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LP TE++LR F G+ITD L T+DGK R+FAF+GF T++ A++A
Sbjct: 2 SRLIVKGLPSNCTEEKLRSHFKSFGKITDCSLKYTRDGKFRRFAFVGFETDENAQKARDN 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRY-----SLKKEKEVSEDEKNPVLAAKRGEK 115
+ +++ T R++ E + GD PR WS+Y + K+ E+EK + + RG
Sbjct: 62 LHNAFMGTSRLTVEECKPFGDSTKPRAWSKYAKGSSAYKRLHPEEEEEKMKRIISLRGSS 121
Query: 116 KTIEKVTENDDPQLLEFLQVMQ 137
+ +K+ + D + +F++V +
Sbjct: 122 PSAKKMRKESDKEFYDFIEVQK 143
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL V+ LP TE++LR HF FG +++ + +D K + A+V + E+A +A +
Sbjct: 3 RLIVKGLPSNCTEEKLRSHFKSFGKITDCSLKYTRDGKFRR-FAFVGFETDENAQKARDN 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEE 404
L N+ L V + S K + ++G+ K+ EE
Sbjct: 62 LHNAFMGTSRLTVEECKPFGDSTKPRAWSKYAKGSSAYKRLHPEE 106
>gi|407393203|gb|EKF26533.1| hypothetical protein MOQ_009766 [Trypanosoma cruzi marinkellei]
Length = 878
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 187/628 (29%), Positives = 299/628 (47%), Gaps = 99/628 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFF-------SQKGEITDAKLMRTKD-GKSR---QFAFIGFR 49
SR+ V NLP+ TE++LR EITD + R++ GK++ + AF+GFR
Sbjct: 2 SRVRVLNLPRDCTEEQLRRHLLASLPPAGPHLEITDCVIKRSQSTGKTKGVVRMAFVGFR 61
Query: 50 TEQEAEEAIKYFNKSYLDTCRISCEIARKVGD----PNM--------PRPWSRYSLKKEK 97
+++F+ +Y + ++ E+A+ + D NM RP R + +K
Sbjct: 62 NAASGNFVVRHFDGTYFGSAKLRVEVAKGLADVGVTTNMRKKMEGAEVRP-QRSATAGKK 120
Query: 98 EVSEDEKNPVLAAKR---GEKKTIEKVTEN------DDPQLL-------EFLQVMQPRVK 141
+ E + A KR G +KT+ + E DD QL EF+
Sbjct: 121 DGEETAGSSGGAMKRPRDGGQKTVAEQVERGGMETEDDAQLRKKNERKKEFIAERLKATS 180
Query: 142 SKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLHVKS--DKSNVITDSQATEKSKN 199
W ++ L+ A+ AK ++GG H K D +N D+ E+++
Sbjct: 181 GPTWTSEVLLPEFAESNAK-------PMEGGTAMGGAHGKEYDDYTNEENDALDDEENER 233
Query: 200 AAADEL-----MSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSN 254
A + +SD+D+ S K + S G NG +
Sbjct: 234 RALERQQALGKVSDLDFLASIATKTEATSRKSSSVKG------------------NGAVD 275
Query: 255 EECDSIIKDSIHSGV-GEEDANGE------IVDPGNPSSSSKDVQQEVL-ESGRLFVRNL 306
EE +I +D +GV +ED E VD SS KD Q+ ++ ES R+ + N+
Sbjct: 276 EEVGNIGEDEDDAGVEQQEDVGSESRQQLSCVD----DSSKKDDQEAIVQESRRIRLGNI 331
Query: 307 PYTATEDELREHFSKF-GNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIF 365
PY ATED++++ S G+V VHI + KDT++SKG A+V + E A RA+ + ++F
Sbjct: 332 PYIATEDDVKQFASSLVGSVEAVHIPLTKDTRQSKGAAFVKFVRVEDAVRALSLCRGAVF 391
Query: 366 QGRLLHVMPARHKKSSDKQELHNSTS--QGTKTLKQRREEERKASEASGNTKAWNSLFMR 423
GRLL V A + K E H T+ G K+ +E+ER+ +G+T WN+++M
Sbjct: 392 MGRLLRVSAAEDDPYTKKLESHGDTAAMAGNSAFKRLKEQERR--NENGSTLGWNTMYMN 449
Query: 424 PDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFS 483
VE +A+K GV+ ++ A AVR A+ E + E ++ L + G++ LE
Sbjct: 450 SHAAVELVAKKIGVTSDAVISVNARGAAVRAAIAEAYLTTEIQQVLGDEGIDFGLLE--- 506
Query: 484 AGKTDGLK-RSNHVFLVKNL----PYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFL 538
+ + + LK RSN LVKN+ P D++ +L+KMF ++G+L+ PS AL +
Sbjct: 507 SARQNLLKTRSNTTILVKNIQTTDPDDAA--QLSKMFLRYGALEATAFPSAGGFALFRYT 564
Query: 539 EPVEAAAAFKGLAYKRYKGVPLYLEWAP 566
+A AF+ L+YK +K PL+LEWAP
Sbjct: 565 HQQDARVAFQRLSYKLFKNAPLFLEWAP 592
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRT-------KDGKSRQFAFIGFRTEQEA 54
++ VKN+P TE +RD FS EI +L R ++ R FAF+ F +E+EA
Sbjct: 792 KLVVKNVPFEATERDIRDLFSAFSEIRSVRLPRKSHQFSSHRENNHRGFAFVEFLSEEEA 851
Query: 55 EEAIKYFNKSYL 66
+ A++ ++L
Sbjct: 852 KRALETLKATHL 863
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEV------HIVVDKDTKRSKGIAYVLYAIPESA 353
+L V+N+P+ ATE ++R+ FS F + V H +G A+V + E A
Sbjct: 792 KLVVKNVPFEATERDIRDLFSAFSEIRSVRLPRKSHQFSSHRENNHRGFAFVEFLSEEEA 851
Query: 354 SRAIEVLDNSIFQGRLLHVMPAR 376
RA+E L + GR L + A+
Sbjct: 852 KRALETLKATHLYGRHLVLQYAK 874
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 610 PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL--KNGKNVSMGFGFI 667
P ++ L VKN+ F+ + ++R F E R + + K H + +N GF F+
Sbjct: 785 PPGCDALKLVVKNVPFEATERDIRDLFSA-FSEIRSVRLPRKSHQFSSHRENNHRGFAFV 843
Query: 668 EFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQ 704
EF S E A L+ T L G L+LQ +AK D Q
Sbjct: 844 EFLSEEEAKRALETLKATHLYGRHLVLQ--YAKLDGQ 878
>gi|71652574|ref|XP_814940.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70879958|gb|EAN93089.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 878
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 177/627 (28%), Positives = 297/627 (47%), Gaps = 97/627 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFF-------SQKGEITDAKLMRTKD-GKSR---QFAFIGFR 49
SR+ V NLP+ TE++LR EITD + R++ GK R + AF+GFR
Sbjct: 2 SRVRVLNLPRDCTEEQLRRHLLASLPPSGPHLEITDCVIKRSQSTGKGRGVVRMAFMGFR 61
Query: 50 TEQEAEEAIKYFNKSYLDTCRISCEIARKVGD----PNM--------PRPW-SRYSLKKE 96
+++F+ +Y + ++ E+A+ + D NM RP S + K++
Sbjct: 62 NAASGNFVVRHFDGTYFGSAKLRVEVAKGLADVGVTTNMRKKMEGAEGRPQRSAAAGKRD 121
Query: 97 KEVSEDEKNPVLAAKR-GEKKTIEKVTEN------DDPQLL-------EFLQVMQPRVKS 142
E + + R G +KT+ + + +D QL EF+
Sbjct: 122 GEGTAGSSGGAMKRPRDGGQKTVAEQGDGGGMEMEEDAQLRKKNERKKEFIAERLKATSG 181
Query: 143 KMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAA 202
W + L+ A+ A+ E + + GG V ++ N D + E+
Sbjct: 182 PTWTTEVLLPESAESNARTVEGGT--VMGGAHGNEYDVHINEENDALDEEENERRALERQ 239
Query: 203 DEL--MSDMDYFKS-------RVKKDWSDS-----ESEDDSAGDDDDDDDGEEEEEEEND 248
L +SD+D+ S ++++ S + +D + GDD+DD GE++E+
Sbjct: 240 QALGKVSDLDFLASIATRTEATIRRNSSVKGNGVVDEDDGNIGDDEDDAGGEQQEDV--- 296
Query: 249 HNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVL-ESGRLFVRNLP 307
G + + S + DS S KD Q+ ++ ES R+ + N+P
Sbjct: 297 --GSESRQQPSCVDDS----------------------SKKDDQEAIVQESRRIRLGNIP 332
Query: 308 YTATEDELREHFSKF-GNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQ 366
Y ATED++++ S G+V VHI + KDT++SKG A+V + E A RA+ + ++F
Sbjct: 333 YIATEDDVKQFASSLVGSVEAVHIPLTKDTRQSKGAAFVKFVRVEDAMRALSLCRGAVFM 392
Query: 367 GRLLHVMPARHKKSSDKQELHNSTS--QGTKTLKQRREEERKASEASGNTKAWNSLFMRP 424
GRLL V A + K E H + G K+ +E+ER+ +G+T WN+++M
Sbjct: 393 GRLLRVSAAEDDPYTKKLESHGDAAAMAGNSAFKRLKEQERR--NENGSTMGWNTMYMNS 450
Query: 425 DTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSA 484
VE +A++ GV+ ++ A AVR A+ E + E ++ L + G++ LE +
Sbjct: 451 HAAVELVAKRIGVTPDAVISVNARGAAVRAAIAEAYLTTEIQQVLGDEGIDFGLLE---S 507
Query: 485 GKTDGLK-RSNHVFLVKNL----PYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLE 539
+ + LK RSN LVKN+ P D++ +L+KMF ++G+L+ PS AL +
Sbjct: 508 ARQNLLKTRSNTTILVKNIQTTDPDDAA--QLSKMFLRYGALEATAFPSAGGFALFRYTH 565
Query: 540 PVEAAAAFKGLAYKRYKGVPLYLEWAP 566
+A AF+ L+YK +K PL+LEWAP
Sbjct: 566 QQDARVAFQRLSYKLFKNAPLFLEWAP 592
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRT-------KDGKSRQFAFIGFRTEQEA 54
++ VKN+P TE +RD FS EI +L R ++ R FAF+ F +E+EA
Sbjct: 792 KLVVKNVPFEATERDIRDLFSAFSEIRSVRLPRKSHHFSSHRENNHRGFAFVEFLSEEEA 851
Query: 55 EEAIKYFNKSYL 66
+ A++ ++L
Sbjct: 852 KRALETLKATHL 863
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEV------HIVVDKDTKRSKGIAYVLYAIPESA 353
+L V+N+P+ ATE ++R+ FS F + V H +G A+V + E A
Sbjct: 792 KLVVKNVPFEATERDIRDLFSAFSEIRSVRLPRKSHHFSSHRENNHRGFAFVEFLSEEEA 851
Query: 354 SRAIEVLDNSIFQGRLLHVMPAR 376
RA+E L + GR L + A+
Sbjct: 852 KRALETLKATHLYGRHLVLQYAK 874
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 610 PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKH--LKNGKNVSMGFGFI 667
P ++ L VKN+ F+ + ++R F E R + + K H + +N GF F+
Sbjct: 785 PPGCDALKLVVKNVPFEATERDIRDLFSA-FSEIRSVRLPRKSHHFSSHRENNHRGFAFV 843
Query: 668 EFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQ 704
EF S E A L+ T L G L+LQ +AK D Q
Sbjct: 844 EFLSEEEAKRALETLKATHLYGRHLVLQ--YAKLDGQ 878
>gi|339237553|ref|XP_003380331.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316976854|gb|EFV60053.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 645
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 229/435 (52%), Gaps = 35/435 (8%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
P+ + K + ESG +F+RNLPY TE++L+ FG ++EV+ VD T + KG A
Sbjct: 208 PAENPKQQADLIAESGCIFLRNLPYQCTEEDLKNWLKTFGPIAEVNFHVDSKTGKPKGFA 267
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ-----GTKTLK 398
V + PE+A + D SIFQGR++H++ ++ E N+ S+ GT T K
Sbjct: 268 LVKFVFPENALKVFTECDGSIFQGRVVHILAG----FENEDETKNAKSEEDDDDGTVTFK 323
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN-DLAVRIALG 457
+ + ERK +A+ + + WNSLF+ + V + +A V K +L+ + L VR+ALG
Sbjct: 324 EAK--ERKQQQAASDKRTWNSLFLGVNAVADIMAETLDVEKGAILNVHCHSSLGVRMALG 381
Query: 458 ETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGK 517
E++++ ET++ L GV LE FS KRS +V LVKNLP + ++ ++FGK
Sbjct: 382 ESRIVRETREFLEQNGVQ---LESFSGNLVT--KRSTNVMLVKNLPAKTETAQIRRLFGK 436
Query: 518 FGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
FG L +V+LP + A+V FL +A AAF+ LA+KRY ++E+ +D +Q + +
Sbjct: 437 FGRLGRVVLPPSGLTAIVEFLLDSDAKAAFQNLAFKRYG----FVEYE-NDQHAQEAIRR 491
Query: 578 --GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDP--DRVESRS---LFVKNLNFKTCDE 630
+ +++ +KR + I P ++ + +S + V+N+ F+ +
Sbjct: 492 LQNGELKGSIIQIQLSKRQTSSSSSVVDRQSSIVPYSEKTKPKSQTKIIVRNIPFQASVK 551
Query: 631 NLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQ-GTILDG 689
+ K F G + SV++ K NG++ GFGF+EF+ A + L T L G
Sbjct: 552 EITKLFKVF---GNVQSVRLPKKSPNGQH--RGFGFVEFNCKADAEKAFKHLGVSTHLYG 606
Query: 690 HALILQLCHAKKDEQ 704
L+L+ + D Q
Sbjct: 607 RRLVLEWADLEGDLQ 621
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 28/164 (17%)
Query: 593 RALLEQQLEGVTDADIDPDRVESRS---LFVKNLNFKTCDENLRKHFGEHIKEGRI---- 645
R LEQ GV + V RS + VKNL KT +R+ FG+ + GR+
Sbjct: 390 REFLEQN--GVQLESFSGNLVTKRSTNVMLVKNLPAKTETAQIRRLFGKFGRLGRVVLPP 447
Query: 646 --LSVKVKKHLKNGKNVSMG------FGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
L+ V+ L + + +GF+E+++ + A R LQ L G + +QL
Sbjct: 448 SGLTAIVEFLLDSDAKAAFQNLAFKRYGFVEYENDQHAQEAIRRLQNGELKGSIIQIQLS 507
Query: 698 HAK---------KDEQVVKKAEKDK--SSTKLLVRNVAFEAQRK 730
+ + +V +EK K S TK++VRN+ F+A K
Sbjct: 508 KRQTSSSSSVVDRQSSIVPYSEKTKPKSQTKIIVRNIPFQASVK 551
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SR+ VKNLPK E R F + G +TD +L ++ R F F+GF+ A+ A
Sbjct: 17 SRLIVKNLPKNFKEAHFRALFEEYGTLTDCQLRFNEQNNNFRGFGFVGFQNADNAKAAKN 76
Query: 60 YFNKSYLDTCRISCEIA 76
+ +++ + +I E
Sbjct: 77 ALDNTFVKSSKIKVEYC 93
>gi|340382973|ref|XP_003389992.1| PREDICTED: probable RNA-binding protein 19-like [Amphimedon
queenslandica]
Length = 660
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/278 (41%), Positives = 174/278 (62%), Gaps = 6/278 (2%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ +SG++F+RNLPYT TE+EL E F ++G +SE++++VDK T G+ YV + PE A
Sbjct: 372 IADSGQIFIRNLPYTTTEEELTELFEEYGQLSEINLLVDKSTGSFIGLGYVTFMFPEHAV 431
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT 414
+A LD +FQGRLLH++P+ K + + + S T++ + +++ K +G++
Sbjct: 432 KAFSELDGQVFQGRLLHLLPS--KPPNKEVGVVKSIEPETQSSSFKSKQKEKLKLEAGSS 489
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN-DLAVRIALGETQVIAETKKALTNAG 473
WN+LF+ + V ++ A + GV KS+LLD + LAVR+ALGETQ++ ET++ L + G
Sbjct: 490 HNWNTLFLGSNAVADSTADQFGVRKSELLDLDTTQSLAVRLALGETQLVNETREFLESHG 549
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
V ++ + T KRS +V LVKNLP+ +S EL ++FG FGSL VILP A
Sbjct: 550 VKLNLFDTDENEVTR--KRSKNVVLVKNLPFGTSTKELTELFGPFGSLSCVILPPAGISA 607
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS 571
LV + A AFK L+Y +K +PLYLEWA V+S
Sbjct: 608 LVEY-SSSNAKVAFKKLSYCEFKHLPLYLEWASFGVMS 644
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 63/92 (68%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP T L++ FS+ G+ITD KLM T+ G R+FAF+G+ A+E+IKY
Sbjct: 28 SRVIVKNLPSKATSKELKEHFSKCGQITDVKLMYTRSGTFRRFAFVGYSDSFSAQESIKY 87
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
FN +Y+ T +I A+ GD ++PRPWS+YS
Sbjct: 88 FNNTYIGTSKIQVIEAKSFGDSSIPRPWSKYS 119
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S R+ V+NLP AT EL+EHFSK G +++V ++ + + A+V Y+ SA +I
Sbjct: 27 SSRVIVKNLPSKATSKELKEHFSKCGQITDVKLMYTRSGTFRR-FAFVGYSDSFSAQESI 85
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
+ +N+ + V+ A+ S + S G+ T Q E++RK+++ S
Sbjct: 86 KYFNNTYIGTSKIQVIEAKSFGDSSIPRPWSKYSTGSST-NQIYEKKRKSTKDS 138
>gi|399216364|emb|CCF73052.1| unnamed protein product [Babesia microti strain RI]
Length = 717
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 140/467 (29%), Positives = 239/467 (51%), Gaps = 52/467 (11%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR--------SKGIAYVLYAIPE 351
R+ + NLPY +EDELR+ FG ++++HI K T+ ++G AY+ +
Sbjct: 178 RVVLFNLPYNVSEDELRKLVKNFGPITQIHIPASKFTESDNNKVMNLTRGFAYITFLFDV 237
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTK--TLKQ--RREEERKA 407
A R ++ D +IF GRLL ++PA+ + ++ N K T K+ + E + +
Sbjct: 238 DAGRFLQEKDKTIFCGRLLSILPAKVNITGAIDDISNDRISIKKRDTCKRGYKAELKERL 297
Query: 408 SEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLL-DREANDLAVRIALGETQVIAETK 466
E + N WN+L++ +T ++ ++ + G+S+ LL + + +AV A ET VIA+ K
Sbjct: 298 MEDAENQDIWNTLYIDINTAIQAVSDELGISRDQLLRTSDKHSVAVTAASSETAVIAKLK 357
Query: 467 KALTNAGVNV-----SSLEEFSA-----GKTDGLK-RSNHVFLVKNLPYDSSEGELAKMF 515
L GV++ S L+ F + G D K RS +VKNL + + E EL +F
Sbjct: 358 NWLNEEGVDIDCFQRSQLKHFKSHNNLNGDDDSSKLRSCDTIIVKNLSFKTDEDELRDLF 417
Query: 516 GKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
K G L + + + + +V +L +A AF GLAYK Y G+P+YLEWAP +
Sbjct: 418 AKKGQLMRFSISPYRNMCIVQYLNAEDAKKAFTGLAYKNYLGMPIYLEWAPCHLY----- 472
Query: 576 SKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVES--RSLFVKNLNFKTCDENLR 633
+K+ + + + + E++ + D + D V+ S+++KNLNF T +E L
Sbjct: 473 ----KKHAPTIDNLNTQTSNYEEEEPNCYEDDSN-DMVDGLHASIYIKNLNFITNNEKLH 527
Query: 634 KHFGEHIKEGRILSVKVKKH--LKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHA 691
+ +G I + ++ +K+ K +SMGFGF EF +++ A + L G +LDGH
Sbjct: 528 QLMSGC--DGLITCKVITRYDSVKD-KTLSMGFGFAEFVTLDAAKAAIKLLTGKLLDGH- 583
Query: 692 LILQLCHAKKDEQVVKKAEKDKS---------STKLLVRNVAFEAQR 729
+L+ A K V K ++ ++ S KL ++N+AF+A +
Sbjct: 584 -LLEFSLADKTHSVKKSVKRTRARGKIGTCKVSNKLSIKNLAFQATK 629
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 25/102 (24%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-----EITDAKLM------RTK------------- 36
SR+ VKNLP + LR F++ +ITD +L+ R+K
Sbjct: 8 SRLIVKNLPLTLDNKTLRKIFTENASKLGLQITDCQLLHKYPNLRSKHTSTSNKGAKVFE 67
Query: 37 DGK-SRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIAR 77
+GK S+ FIGF ++ A++ +Y+N +Y+ +C+I+ + AR
Sbjct: 68 NGKVSKGVCFIGFINQKFAKKFKEYYNGTYVRSCKITVDFAR 109
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S L +KNL F+ +RK F + G + +V++ K + N + GF F+EF+S
Sbjct: 615 SNKLSIKNLAFQATKSEVRKLFSLY---GNVRTVRIPKSMSNS---NRGFAFVEFESKSD 668
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKDEQ 704
A N LQ T L G LIL + +Q
Sbjct: 669 AVNALEALQHTHLYGRHLILDFAQPTQFDQ 698
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L ++NL + AT+ E+R+ FS +GNV V I + ++G A+V + A A+
Sbjct: 615 SNKLSIKNLAFQATKSEVRKLFSLYGNVRTVRIPKSM-SNSNRGFAFVEFESKSDAVNAL 673
Query: 358 EVLDNSIFQGRLL 370
E L ++ GR L
Sbjct: 674 EALQHTHLYGRHL 686
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 118/303 (38%), Gaps = 48/303 (15%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NL + EDELR+ F+K G + I + + V Y E A +A L
Sbjct: 399 IIVKNLSFKTDEDELRDLFAKKGQLMRFSI------SPYRNMCIVQYLNAEDAKKAFTGL 452
Query: 361 DNSIFQGRLLHVMPAR-HKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA--- 416
+ G +++ A H + N +Q + EEE E N
Sbjct: 453 AYKNYLGMPIYLEWAPCHLYKKHAPTIDNLNTQTS----NYEEEEPNCYEDDSNDMVDGL 508
Query: 417 WNSLFMRPDTVVENIARKH-------GVSKSDLLDR--EANDLAVRIALGETQVI----A 463
S++++ + N + H G+ ++ R D + + G + + A
Sbjct: 509 HASIYIKNLNFITNNEKLHQLMSGCDGLITCKVITRYDSVKDKTLSMGFGFAEFVTLDAA 568
Query: 464 ETKKALTNAGVNVSSLEEFS-AGKTDGLKRS---------------NHVFLVKNLPYDSS 507
+ L + L EFS A KT +K+S ++ +KNL + ++
Sbjct: 569 KAAIKLLTGKLLDGHLLEFSLADKTHSVKKSVKRTRARGKIGTCKVSNKLSIKNLAFQAT 628
Query: 508 EGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYL 562
+ E+ K+F +G++ V +P S + A V F +A A + L + G L L
Sbjct: 629 KSEVRKLFSLYGNVRTVRIPKSMSNSNRGFAFVEFESKSDAVNALEALQHTHLYGRHLIL 688
Query: 563 EWA 565
++A
Sbjct: 689 DFA 691
>gi|313234382|emb|CBY24581.1| unnamed protein product [Oikopleura dioica]
Length = 1430
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 167/276 (60%), Gaps = 11/276 (3%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
+V ++GRLF+RN+ Y TE +L++ +G ++E+ + D+ TKR KG A+V Y +PE+A
Sbjct: 1159 DVADTGRLFIRNMSYLCTETDLKDLLGSYGTLTELVLPTDEVTKRPKGFAFVEYQMPENA 1218
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
RA+ LD S FQGR++HV+P R ++ K+ T T ++ + + A
Sbjct: 1219 VRAMAELDGSSFQGRIMHVLPGR--EAVAKKNYAPRTDPNLNTSYKKEKMAKMKENADKE 1276
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAG 473
+WNSLF+ + V + +++++ +SK ++ R+ D+AV++ALGE+Q++++ + L + G
Sbjct: 1277 DFSWNSLFVGANAVADEMSKRYELSKDSIMRRD--DVAVQLALGESQIVSDISEYLKDHG 1334
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
V + + ++ ++ RS+ + LVKNLP + EL F KFG L ++I+P + A
Sbjct: 1335 VKLDTFKKDAS-------RSDKIILVKNLPSGALPTELRFKFEKFGGLGRIIMPPSGLAA 1387
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDV 569
L+ F + A AFK +AY R+ PLYLEWAPS V
Sbjct: 1388 LIEFDGSINAKRAFKAVAYSRFGDRPLYLEWAPSVV 1423
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRICVKNL K E LR FF + G +ITD +L++ +G SR+ AFIGF ++A+ A+
Sbjct: 1033 SRICVKNLTKSCDEKSLRTFFGRTGAKITDCRLLKNDEGVSRRIAFIGFARPEDAKNALN 1092
Query: 60 YFNKSYLDTCRISCEIAR 77
+ + + +I E+A+
Sbjct: 1093 ELDGAKVGVNKIKVELAK 1110
>gi|241147227|ref|XP_002405304.1| RNA binding motif protein, putative [Ixodes scapularis]
gi|215493703|gb|EEC03344.1| RNA binding motif protein, putative [Ixodes scapularis]
Length = 597
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 177/323 (54%), Gaps = 27/323 (8%)
Query: 421 FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLE 480
FM P+ ++ + G LL + +AVR+ALGETQV+ ETK+ L GV L+
Sbjct: 203 FMFPEHAIKAFSELDG----KLLQEMGDSVAVRMALGETQVVTETKEFLQGQGVE---LD 255
Query: 481 EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEP 540
F T+ RS V LVKNLP + E+ F KFG+L +V+LP ALV F EP
Sbjct: 256 AFCRPATE---RSKTVILVKNLPAKTHPDEIRDAFAKFGTLSRVVLPPWGICALVEFQEP 312
Query: 541 VEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ-----SSTSKGNQKNDAVVGEHDAKRAL 595
EA AF+ LAY ++K VPLYLEWAP V + T K K + D ++
Sbjct: 313 SEARTAFRRLAYSKFKHVPLYLEWAPVGVFKEKKTIPKPTLKDVTKEEPTKASEDGEKEA 372
Query: 596 LEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV--KKH 653
+ + + + + +P ++ +LFVKNLNF T +E LR+HF G I V + KK
Sbjct: 373 EKAERQEEEEEEEEPPEPDT-TLFVKNLNFSTTEEALREHFAGC---GPIHEVTIAKKKD 428
Query: 654 LKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV-----K 707
LKN GK +SMG+GF++F ++A + LQ + LD HA+ L+L + +Q K
Sbjct: 429 LKNPGKMLSMGYGFVQFKLKQSAKKALKQLQHSKLDEHAVELKLSKRETAQQTAAELKRK 488
Query: 708 KAEKDKSSTKLLVRNVAFEAQRK 730
K + K STK+LVRN+ FEA +K
Sbjct: 489 KTDLGKESTKILVRNIPFEATKK 511
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 58/81 (71%)
Query: 12 VTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRI 71
V EDRLR+FFS KG ITD +L TK+G R+FAF+G++ E +A A +YF+ +YLDT ++
Sbjct: 5 VKEDRLREFFSSKGTITDLQLKYTKEGVFRRFAFVGYKDEAQAAVAKEYFHNAYLDTSKL 64
Query: 72 SCEIARKVGDPNMPRPWSRYS 92
+I + +GD PR WS+YS
Sbjct: 65 QVDICKALGDAEKPRAWSKYS 85
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR-----SKGIAYVLYAIPESASR 355
LFV+NL ++ TE+ LREHF+ G + EV I KD K S G +V + + +SA +
Sbjct: 394 LFVKNLNFSTTEEALREHFAGCGPIHEVTIAKKKDLKNPGKMLSMGYGFVQFKLKQSAKK 453
Query: 356 AIEVLDNS 363
A++ L +S
Sbjct: 454 ALKQLQHS 461
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD-KDTKRSKGIAYVLYAIPESASR 355
ES ++ VRN+P+ AT+ EL+E FS FG + ++ + T R +G A+V + A R
Sbjct: 495 ESTKILVRNIPFEATKKELQELFSVFGTLRDIRLPKKMAGTGRHRGFAFVDFLTKNDAKR 554
Query: 356 AIEVLDNSI-FQGRLLHVMPARHKKSSDKQEL 386
A + L S GR L + A SSD QE+
Sbjct: 555 AFQALCQSTHLYGRRLVLEWA----SSDDQEV 582
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 486 KTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST-------KTLALVVFL 538
KTD K S + LV+N+P+++++ EL ++F FG+L + LP + A V FL
Sbjct: 489 KTDLGKESTKI-LVRNIPFEATKKELQELFSVFGTLRDIRLPKKMAGTGRHRGFAFVDFL 547
Query: 539 EPVEAAAAFKGLAYKRY-KGVPLYLEWAPSD 568
+A AF+ L + G L LEWA SD
Sbjct: 548 TKNDAKRAFQALCQSTHLYGRRLVLEWASSD 578
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 323 GNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQ 366
G +SEVH+ +DK T++ KG A+V + PE A +A LD + Q
Sbjct: 179 GPISEVHLSIDKITRKPKGFAFVSFMFPEHAIKAFSELDGKLLQ 222
Score = 39.3 bits (90), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK------SRQFAFIGFRTEQEA 54
+ + VKNL TE+ LR+ F+ G I + + + KD K S + F+ F+ +Q A
Sbjct: 392 TTLFVKNLNFSTTEEALREHFAGCGPIHEVTIAKKKDLKNPGKMLSMGYGFVQFKLKQSA 451
Query: 55 EEAIKYFNKSYLDTCRISCEIARK 78
++A+K S LD + +++++
Sbjct: 452 KKALKQLQHSKLDEHAVELKLSKR 475
>gi|71423762|ref|XP_812563.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70877357|gb|EAN90712.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 879
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 176/618 (28%), Positives = 296/618 (47%), Gaps = 78/618 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFF-------SQKGEITDAKLMRTKD-GKSR---QFAFIGFR 49
SR+ V NLP+ TE++LR EITD + R++ GK + + AF+GFR
Sbjct: 2 SRVRVLNLPRDCTEEQLRRHLLASLPPSGPHLEITDCVIKRSQSTGKGKGVVRMAFMGFR 61
Query: 50 TEQEAEEAIKYFNKSYLDTCRISCEIARKVGD----PNM--------PRPW-SRYSLKKE 96
+++FN +Y + ++ E+A+ + D NM RP S + K++
Sbjct: 62 NAASGNFVVRHFNGTYFGSAKLRVEVAKGLADVGVTTNMRKKMEGTEERPQRSATAGKRD 121
Query: 97 KEVSEDEKNPVLAAKR--GEKKTIEK-----VTENDDPQLL-------EFLQVMQPRVKS 142
E + + R G+K E+ + +D QL EF+
Sbjct: 122 GEGTAGSSGGAMKRPRDGGQKMVAEQGDGGGMEMEEDAQLRKKNERKKEFIAERLKATSG 181
Query: 143 KMWANDTLIGLMADQKAKVSEN--ISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNA 200
W ++ L+ A+ A+ ++ + G E + ++ +SD D + E+
Sbjct: 182 PTWTSEVLLPESAEFNARTVKDGTVMGGAHGNEYDVHINEESDA----LDDEENERRALE 237
Query: 201 AADEL--MSDMDYFKSRVKKDWSDSESEDDSAGDDD-DDDDGEEEEEEENDHNGDSNEEC 257
L +SD+D+ S K + G+ D++DG+ +++E+D G+ E+
Sbjct: 238 RQQALGKVSDLDFLASIATKTEATIRKSSSVKGNGVVDEEDGKIGDDDEDDAGGEQQEDV 297
Query: 258 DSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVL-ESGRLFVRNLPYTATEDELR 316
S E VD SS KD Q+ ++ ES R+ + N+PY ATED+++
Sbjct: 298 GS-----------ETRQQPSCVD----DSSKKDDQEAIVQESRRIRLGNIPYIATEDDVK 342
Query: 317 EHFSKF-GNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA 375
+ S G+V VHI + KDT++SKG A+V + E A RA+ + ++F GRLL V A
Sbjct: 343 QFASSLVGSVEAVHIPLTKDTRQSKGAAFVKFVRVEDAVRALSLCRGAVFMGRLLRVSAA 402
Query: 376 RHKKSSDKQELHNSTS--QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIAR 433
+ K E H + G K+ +E+ER+ +G+T WN+++M VE +A+
Sbjct: 403 EDDPYTKKLESHGDAAAMAGNSAFKRLKEQERR--NENGSTMGWNTMYMNSHAAVELVAK 460
Query: 434 KHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLK-R 492
+ GV+ ++ A AVR A+ E + E ++ L + G++ LE + + + LK R
Sbjct: 461 RIGVTSDAVISVNARGAAVRAAIAEAYLTTEIQQVLGDEGIDFGLLE---SARQNLLKTR 517
Query: 493 SNHVFLVKNL----PYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFK 548
SN LVKN+ P D++ +L+KMF ++G+L+ PS AL + +A AF+
Sbjct: 518 SNTTILVKNIQTTDPDDAA--QLSKMFLRYGTLEATAFPSAGGFALFRYTHQQDARVAFQ 575
Query: 549 GLAYKRYKGVPLYLEWAP 566
L+YK +K PL+LEWAP
Sbjct: 576 RLSYKLFKNAPLFLEWAP 593
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRT-------KDGKSRQFAFIGFRTEQEA 54
++ VKN+P TE +RD FS EI +L R ++ R FAF+ F +E+EA
Sbjct: 793 KLVVKNVPFEATERDIRDLFSAFSEIRSVRLPRKSHQFSSHRENNHRGFAFVEFLSEEEA 852
Query: 55 EEAIKYFNKSYL 66
+ A++ ++L
Sbjct: 853 KRALETLKATHL 864
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEV------HIVVDKDTKRSKGIAYVLYAIPESA 353
+L V+N+P+ ATE ++R+ FS F + V H +G A+V + E A
Sbjct: 793 KLVVKNVPFEATERDIRDLFSAFSEIRSVRLPRKSHQFSSHRENNHRGFAFVEFLSEEEA 852
Query: 354 SRAIEVLDNSIFQGRLLHVMPAR 376
RA+E L + GR L + A+
Sbjct: 853 KRALETLKATHLYGRHLVLQYAK 875
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 610 PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL--KNGKNVSMGFGFI 667
P ++ L VKN+ F+ + ++R F E R + + K H + +N GF F+
Sbjct: 786 PPGCDALKLVVKNVPFEATERDIRDLFSA-FSEIRSVRLPRKSHQFSSHRENNHRGFAFV 844
Query: 668 EFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQ 704
EF S E A L+ T L G L+LQ +AK D Q
Sbjct: 845 EFLSEEEAKRALETLKATHLYGRHLVLQ--YAKLDGQ 879
>gi|261330461|emb|CBH13445.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 857
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 192/700 (27%), Positives = 316/700 (45%), Gaps = 122/700 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFF-------SQKGEITDAKLMRTKD-------GKSR----- 41
SR+ + NLP+ TED+LR EITD +++ G R
Sbjct: 2 SRVRILNLPRNCTEDQLRSHLLKSLPPDGPHIEITDCVILKRAPRPGARGRGTPRKSPAP 61
Query: 42 --------QFAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGD----PNMPRPWS 89
+ AFIGFR +++ + +Y ++ +A+ + D NM
Sbjct: 62 DASEKGVIRMAFIGFRNAASGHFIVRHLDGTYFGEAKLQVHVAKGLADVGVTTNM----- 116
Query: 90 RYSLKKEKEVSEDEKNPVLAAKRGEKKT--IEKVT--------------ENDDPQLLEFL 133
R L KE++ ++ + + GEK+ +E T E D +
Sbjct: 117 RKKLGKEEQEENNQSSTIKYEGTGEKRARDVELGTKDGKAPNADGAGESEEDAKKRKRRE 176
Query: 134 QVMQPRVKS---KMWANDTLIG-LMADQKAKVSENISQAIKGGEKSITLHVKSDKSNV-I 188
+ + R+++ WA + L+ L AD +A + + GG K ++ + I
Sbjct: 177 EFVTERIRATTGPTWATEVLVPELSADAEASPTGDCD----GGNGDAEPQGKKEQEDPNI 232
Query: 189 TDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEEND 248
+A E+ K +SDMD+ S K+ + + S +D++G G ++ + E
Sbjct: 233 ELEKALERQKKLGE---ISDMDFLSSLAKESANQACSSNDASGGG-----GSDKRKGEVL 284
Query: 249 HNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVL-ESGRLFVRNLP 307
GD +EE +++ P NPS +D Q+EV+ ES R+ + N+P
Sbjct: 285 EKGDESEE-------------------DQLLCPENPSP--RDDQEEVVRESRRIRLGNIP 323
Query: 308 YTATEDELREHFSK-FGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQ 366
+ ATE+++++ S G V VHI + +DTK+SKG A+V +A E A A+ +IF
Sbjct: 324 FIATEEDVKQFASSHVGPVEAVHIPLTRDTKQSKGAAFVKFARVEDAVNALSRCQGAIFM 383
Query: 367 GRLLHVMPARHKKSSDKQELHNSTSQGTKTLK-QRREEERKASEASGNTK--AWNSLFMR 423
GRLL V A + + E G K Q+ ++ RK E + AW+S +M
Sbjct: 384 GRLLRVSAATEDPYAKRSEETAGGLAGNSEFKRQKAKDRRKEGEGTSGVAPVAWSSTYMN 443
Query: 424 PDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFS 483
T VE +A++ GV+ ++ +A AVR A+ E + +E K+ L + G++ S LE
Sbjct: 444 SHTAVETVAKRLGVTADAVVSVDARGAAVRAAIAEAYLTSEIKEVLGDEGIDFSLLE--- 500
Query: 484 AGKTDGLK-RSNHVFLVKNL----PYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFL 538
+ + + LK RSN LVKN+ P D+++ L+KMF K+G+L+ PS AL ++
Sbjct: 501 SARENLLKARSNTTILVKNVTLGDPADAAQ--LSKMFLKYGTLEATAFPSAGAFALFRYV 558
Query: 539 EPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQ 598
+A A + L+YK +K PL+LEWAP + S S+ G ND V R
Sbjct: 559 HQQDARVALQRLSYKLFKNAPLFLEWAP--IGSLSTAEDGGDCNDRVPSHSGNGR----- 611
Query: 599 QLEGVTDADIDPDRV------ESRSLFVKNLNFKTCDENL 632
V D D D + V +LF+ N+ F + E+
Sbjct: 612 ----VDDVDEDGNHVGVAAGTPHFTLFITNIPFNSTKEDF 647
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRT-------KDGKSRQFAFIGFRTEQEA 54
++ VKN+P TE +RD F+ E+ +L R ++ R FAF+ F TE+EA
Sbjct: 771 KLVVKNVPFEATERDIRDLFTAISEVRSVRLPRKSHQFSSHRENNHRGFAFVEFLTEEEA 830
Query: 55 EEAIKYFNKSYL 66
A + ++L
Sbjct: 831 RRAKQTLGSTHL 842
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 604 TDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL--KNGKNVS 661
+D+++ P + L VKN+ F+ + ++R F I E R + + K H + +N
Sbjct: 759 SDSNVPPG-CDGLKLVVKNVPFEATERDIRDLF-TAISEVRSVRLPRKSHQFSSHRENNH 816
Query: 662 MGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDE 703
GF F+EF + E A + L T L G L++Q +AK DE
Sbjct: 817 RGFAFVEFLTEEEARRAKQTLGSTHLYGRHLVIQ--YAKLDE 856
>gi|407835043|gb|EKF99127.1| hypothetical protein TCSYLVIO_009959 [Trypanosoma cruzi]
Length = 871
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 175/618 (28%), Positives = 297/618 (48%), Gaps = 86/618 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFF-------SQKGEITDAKLMRTKD-GKSR---QFAFIGFR 49
SR+ V NLP+ TE++LR EITD + R++ GK + + AF+GFR
Sbjct: 2 SRVRVLNLPRDCTEEQLRRHLLASLPPSGPHLEITDCVIKRSRSTGKGKGVVRMAFMGFR 61
Query: 50 TEQEAEEAIKYFNKSYLDTCRISCEIARKVGD----PNMPRPWSRYSLKKEKEVSEDEKN 105
+++F+ +Y + ++ E+A+ + D NM R + ++ V+ +++
Sbjct: 62 NAASGNFVVRHFDGTYFGSAKLRVEVAKGLADVGVTTNMRRKMEGTEERPQRSVTAGKRD 121
Query: 106 -------PVLAAKR----GEKKTIEK-----VTENDDPQLL-------EFLQVMQPRVKS 142
A KR G+K E+ + +D QL EF+
Sbjct: 122 GEGTAGSSGGAMKRPRDGGQKMVAEQGDGGGMEMEEDAQLRKKNERKKEFIAERLKATSG 181
Query: 143 KMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAA 202
W ++ L+ A+ A+ E+ + + GG V ++ N + +A E+ +
Sbjct: 182 PTWTSEVLLPESAEFNARTVEDGT--VMGGAHGNEYDVHINEEN---ERRALERQQALGK 236
Query: 203 DELMSDMDYFKSRVKKDWSDSESEDDSAGDDD-DDDDGEEEEEEENDHNGDSNEECDSII 261
+SD+D+ S K + G+ D++DG +++E+D G+ E+
Sbjct: 237 ---VSDLDFLASIATKTETTIRKSSSVKGNGVVDEEDGNIGDDDEDDAGGEQQED----- 288
Query: 262 KDSIHSGVGEEDANGEIVDPGNPS----SSSKDVQQEVL-ESGRLFVRNLPYTATEDELR 316
VG E PS SS KD Q+ ++ ES R+ + N+PY ATED+++
Sbjct: 289 -------VGSETRQ-------QPSCVYDSSKKDDQEAIVQESRRIRLGNIPYIATEDDVK 334
Query: 317 EHFSKF-GNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA 375
+ S G+V VHI + KDT++SKG A+V + E A RA+ + ++F GRLL V A
Sbjct: 335 QFASSLVGSVEAVHIPLTKDTRQSKGAAFVKFVRVEDAVRALSLCRGAVFMGRLLRVSAA 394
Query: 376 RHKKSSDKQELHNSTS--QGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIAR 433
+ K E H + G K+ +E+ER+ +G+T WN+++M VE +A+
Sbjct: 395 EDDPYTKKLESHGDAAAMAGNSAFKRLKEQERR--NENGSTMGWNTMYMNSHAAVELVAK 452
Query: 434 KHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLK-R 492
+ GV+ ++ A AVR A+ E + E ++ L + G++ LE + + + LK R
Sbjct: 453 RIGVTSDAVISVNARGAAVRAAIAEAYLTTEIQQVLGDEGIDFGLLE---SARQNLLKTR 509
Query: 493 SNHVFLVKNL----PYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFK 548
SN LVKN+ P D++ +L+KMF ++G+L+ PS AL + +A AF+
Sbjct: 510 SNTTILVKNIQTTDPDDAA--QLSKMFLRYGALEATAFPSAGGFALFRYTHQQDARVAFQ 567
Query: 549 GLAYKRYKGVPLYLEWAP 566
L+YK +K PL+LEWAP
Sbjct: 568 RLSYKLFKNAPLFLEWAP 585
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRT-------KDGKSRQFAFIGFRTEQEA 54
++ VKN+P TE +RD FS EI +L R ++ R FAF+ F +E+EA
Sbjct: 785 KLVVKNVPFEATERDIRDLFSAFSEIRSVRLPRKSHQFSSHRENNHRGFAFVEFLSEEEA 844
Query: 55 EEAIKYFNKSYL 66
+ A++ ++L
Sbjct: 845 KRALETLKATHL 856
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEV------HIVVDKDTKRSKGIAYVLYAIPESA 353
+L V+N+P+ ATE ++R+ FS F + V H +G A+V + E A
Sbjct: 785 KLVVKNVPFEATERDIRDLFSAFSEIRSVRLPRKSHQFSSHRENNHRGFAFVEFLSEEEA 844
Query: 354 SRAIEVLDNSIFQGRLLHVMPAR 376
RA+E L + GR L + A+
Sbjct: 845 KRALETLKATHLYGRHLVLQYAK 867
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 610 PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL--KNGKNVSMGFGFI 667
P ++ L VKN+ F+ + ++R F E R + + K H + +N GF F+
Sbjct: 778 PPGCDALKLVVKNVPFEATERDIRDLFSA-FSEIRSVRLPRKSHQFSSHRENNHRGFAFV 836
Query: 668 EFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQ 704
EF S E A L+ T L G L+LQ +AK D Q
Sbjct: 837 EFLSEEEAKRALETLKATHLYGRHLVLQ--YAKLDGQ 871
>gi|72392895|ref|XP_847248.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176082|gb|AAX70201.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70803278|gb|AAZ13182.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 857
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 202/760 (26%), Positives = 333/760 (43%), Gaps = 124/760 (16%)
Query: 1 SRICVKNLPKYVTEDRLRDFF-------SQKGEITDAKLMRTKD-------GKSR----- 41
SR+ + NLP+ TED+LR EITD +++ G R
Sbjct: 2 SRVRILNLPRNCTEDQLRSNLLKSLPPDGPHIEITDCVILKRAPRPGARGRGTPRKSPAP 61
Query: 42 --------QFAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGD----PNMPRPWS 89
+ AFIGFR +++ + +Y ++ +A+ + D NM
Sbjct: 62 DASEKGVIRMAFIGFRNAASGHFIVRHLDGTYFGEAKLQVHVAKGLADVGVTTNM----- 116
Query: 90 RYSLKKEKEVSEDEKNPV--------------LAAKRGEKKTIEKVTENDD-----PQLL 130
R L KE++ ++ + + L K G+ + E+++ +
Sbjct: 117 RKKLGKEEQEENNQSSTIKYEGIGEKRARDVELGTKDGKAPNADGAGESEEDAKKRKRRE 176
Query: 131 EFLQVMQPRVKSKMWANDTLIG-LMADQKAKVSENISQAIKGGEKSITLHVKSDKSNV-I 188
EF+ WA + L+ L AD +A + + GG K ++ + I
Sbjct: 177 EFVTERIRATTGPTWATEVLVPELSADAEASPTGDCD----GGNGDAEPQGKKEQEDPNI 232
Query: 189 TDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEEND 248
+A E+ K +SDMD+ S K+ + + S +D++G G ++ + E
Sbjct: 233 ELEKALERQKKLGE---ISDMDFLSSLAKESANQACSSNDASGGG-----GSDKRKGEVL 284
Query: 249 HNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVL-ESGRLFVRNLP 307
GD +EE +++ P NPS +D Q+EV+ ES R+ + N+P
Sbjct: 285 EKGDESEE-------------------DQLLCPENPSP--RDDQEEVVRESRRIRLGNIP 323
Query: 308 YTATEDELREHFSK-FGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQ 366
+ ATE+++++ S G V VHI + +DTK+SKG A+V +A E A A+ +IF
Sbjct: 324 FIATEEDVKQFASSHVGPVEAVHIPLTRDTKQSKGAAFVKFARVEDAVNALSRCQGAIFM 383
Query: 367 GRLLHVMPARHKKSSDKQELHNSTSQGTKTLK-QRREEERKASEASGNTK--AWNSLFMR 423
GRLL V A + + E G K Q+ ++ RK E + AW+S +M
Sbjct: 384 GRLLRVSAATEDPYAKRSEETAGGLAGNSEFKRQKAKDRRKEGEGTSGVAPVAWSSTYMN 443
Query: 424 PDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFS 483
T VE +A++ GV+ ++ +A AVR A+ E + +E K+ L + G++ S LE
Sbjct: 444 SHTAVETVAKRLGVTADAVVSVDARGAAVRAAIAEAYLTSEIKEVLGDEGIDFSLLE--- 500
Query: 484 AGKTDGLK-RSNHVFLVKNLPYD--SSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEP 540
+ + + LK RSN LVKN+ + +L+KMF K+G+L+ PS AL ++
Sbjct: 501 SARENLLKARSNTTILVKNVTLGDPAYAAQLSKMFLKYGTLEATAFPSAGAFALFRYVHQ 560
Query: 541 VEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQL 600
+A AF+ L+YK +K PL+LEWAP + S S+ G ND V R
Sbjct: 561 QDARVAFQRLSYKLFKNAPLFLEWAP--IGSLSTAEDGGDCNDRVPSHSGNGR------- 611
Query: 601 EGVTDADIDPDRV------ESRSLFVKNLNFKTCDENLRKHFGEHI-KEGRILSVKVKK- 652
V D D D + V +LF+ N+ F + E+ + + R V++
Sbjct: 612 --VDDVDEDGNHVGVAAGTPHFTLFITNIPFNSTKEDFNTFLLDSCPRLARAPDKFVERL 669
Query: 653 HLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHAL 692
L+ GK G F+ T + V + L G + G L
Sbjct: 670 ELEQGK----GRAFLTLRDASTMSYVQQRLNGRTMAGRTL 705
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRT-------KDGKSRQFAFIGFRTEQEA 54
++ VKN+P TE +RD F+ E+ +L R ++ R FAF+ F TE+EA
Sbjct: 771 KLVVKNVPFEATERDIRDLFTAVSEVRSVRLPRKSHQFSSHRENNHRGFAFVEFLTEEEA 830
Query: 55 EEAIKYFNKSYL 66
A + ++L
Sbjct: 831 RRAKQTLGSTHL 842
>gi|429329749|gb|AFZ81508.1| hypothetical protein BEWA_009200 [Babesia equi]
Length = 687
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 140/477 (29%), Positives = 229/477 (48%), Gaps = 69/477 (14%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVV--------------------DKDT 336
++ R+ + NLPY TE +RE FG + ++H+ + DKD+
Sbjct: 169 DASRVIIFNLPYNITEGAIREFCKPFGPIKDIHLPMNTQFTLQDLHGSANNEDPTEDKDS 228
Query: 337 -------------KRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK 383
K +KG YV + P A + + + SIF GR++HV A+ K K
Sbjct: 229 TNLQIKPASQDVSKMTKGYCYVTWMFPSDAVKFKDAKNRSIFSGRIIHVDIAKPKV---K 285
Query: 384 QELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLL 443
EL + K+ K+ +++K + N WN+L + + + +++++ + K D+L
Sbjct: 286 PELDFTDRIKRKSYKKEAIKKKKED--AENVGIWNTLHIDINATIGSVSKQLNIEKGDIL 343
Query: 444 DREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDG-LKRSNHVFLVKNL 502
D + AV + L E V ++ + L + G+N E T G RS+ ++KNL
Sbjct: 344 DESSA--AVNVTLTEAYVTSKLTEWLVSQGINYEQYE------TKGTFCRSDDTIIIKNL 395
Query: 503 PYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYL 562
P ++ E EL +MF +FG L + L + + F + A AFK LAYK Y +PLYL
Sbjct: 396 PPNTVEIELLEMFRQFGKLIRFSLSPFMVMGIAQFYDSKSANTAFKNLAYKSYLSLPLYL 455
Query: 563 EWAPSDVLSQSSTSKGNQKN----DAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSL 618
EWAP + +T + N D+ E + + E ++ D + + S+
Sbjct: 456 EWAPIGMFHPDATIDDSLLNVTISDSKPEESSEPKEIPEAVVQEEQRKDTPEESILHTSV 515
Query: 619 FVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNV 678
++KNL+FKT DE+L HF + G I S V +++G +SMGFGFIEFDS+E A
Sbjct: 516 YLKNLDFKTRDEDLHSHFSSY--PGYISSKVV---IRDG--LSMGFGFIEFDSLEHAKAA 568
Query: 679 CRDLQGTILDGHALILQLC------HAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQR 729
G ++ G L + + K +QV+ A STK++V+N+AF+A +
Sbjct: 569 IMKASGKLICGRLLEMSISKQEKKEVVKLKKQVIATA-----STKIIVKNLAFQATK 620
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTK-RSKGIAYVLYAIPESASRA 356
S ++ V+NL + AT+ E+ + FS +GN+ V I K K + +G A+V + + A A
Sbjct: 606 STKIIVKNLAFQATKSEIHKLFSFYGNIKSVRI--PKSVKNQHRGFAFVDFMTKQEAIHA 663
Query: 357 IEVLDNSIFQGRLL 370
+E L +S F GR L
Sbjct: 664 MEALQHSHFYGRHL 677
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I VKNL T+ + FS G I ++ ++ + R FAF+ F T+QEA A++
Sbjct: 607 TKIIVKNLAFQATKSEIHKLFSFYGNIKSVRIPKSVKNQHRGFAFVDFMTKQEAIHAMEA 666
Query: 61 FNKSYLDTCRISCEIARK 78
S+ + E A +
Sbjct: 667 LQHSHFYGRHLVLEFAEQ 684
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE-----ITDAKLM--RTKDGK-----SRQFAFIGF 48
+R+ VKNLP + + QK + D KL+ + +D K SR+ F+GF
Sbjct: 7 TRVIVKNLPPNLDSKGIEKLILQKCKDLGLVCCDCKLLTKKKRDHKTTVEVSRRLCFVGF 66
Query: 49 RTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWS 89
+ +A + +++++ SY T +++ E +R + + +P S
Sbjct: 67 LNDTDATKFLEHYDGSYFRTYKVNIEYSRPIPKTEVSKPQS 107
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPST-----KTLALVVFLEPVEAAAAFKGLAY 552
+VKNL + +++ E+ K+F +G++ V +P + + A V F+ EA A + L +
Sbjct: 610 IVKNLAFQATKSEIHKLFSFYGNIKSVRIPKSVKNQHRGFAFVDFMTKQEAIHAMEALQH 669
Query: 553 KRYKGVPLYLEWA 565
+ G L LE+A
Sbjct: 670 SHFYGRHLVLEFA 682
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S + VKNL F+ + K F + G I SV++ K +KN GF F++F + +
Sbjct: 606 STKIIVKNLAFQATKSEIHKLFSFY---GNIKSVRIPKSVKNQHR---GFAFVDFMTKQE 659
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKD 702
A + LQ + G L+L+ ++D
Sbjct: 660 AIHAMEALQHSHFYGRHLVLEFAEQEED 687
>gi|119618468|gb|EAW98062.1| RNA binding motif protein 19, isoform CRA_a [Homo sapiens]
gi|119618469|gb|EAW98063.1| RNA binding motif protein 19, isoform CRA_a [Homo sapiens]
Length = 777
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 164/309 (53%), Gaps = 38/309 (12%)
Query: 450 LAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEG 509
+AVR+ALGETQ++ E ++ L + GV++ S + +A +RS V LVKNLP +
Sbjct: 365 VAVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAA------ERSKTVILVKNLPAGTLAA 418
Query: 510 ELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDV 569
EL + FG FGSL +V+LP A+V FLEP+EA AF+ LAY ++ VPLYLEWAP V
Sbjct: 419 ELQETFGHFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVGV 478
Query: 570 LSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR----------------- 612
S ++ K + D + A E +G T D +P
Sbjct: 479 FSSTAPQK-KKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEE 537
Query: 613 ------VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVSMGFG 665
+ +LF+KNLNF T +E L++ F K G + S + KK K G +SMGFG
Sbjct: 538 EEEEESLPGCTLFIKNLNFDTTEEKLKEVFS---KVGTVKSCSISKKKNKAGVLLSMGFG 594
Query: 666 FIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV----KKAEKDKSSTKLLVR 721
F+E+ E A + LQG ++DGH L +++ V K+ + ++++K+LVR
Sbjct: 595 FVEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVR 654
Query: 722 NVAFEAQRK 730
N+ F+A +
Sbjct: 655 NIPFQAHSR 663
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 192/380 (50%), Gaps = 49/380 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A K+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKT- 117
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P + +KK
Sbjct: 62 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKVA 121
Query: 118 --IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKGGEK 174
+EK+ E D + EFL V Q R ++ WAND L + K+K S+ ++ G++
Sbjct: 122 GQLEKLKE--DTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQE 179
Query: 175 SITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSR-VKKDWSDSESEDDSAGDD 233
S + + + + +A+ + K A EL SDMDY KS+ VK S S E++S +
Sbjct: 180 S-----EEEGAGEDLEEEASLEPKAAVQKEL-SDMDYLKSKMVKAGSSSSSEEEESEDEA 233
Query: 234 DDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE-----------DANGEIVDPG 282
D+G E EEE++ ++++ G G+E +A E P
Sbjct: 234 VHCDEGSEAEEEDSS--------ATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPA 285
Query: 283 N---PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS 339
N P++ V+ +R P+ TE + E + V+ + IV + ++
Sbjct: 286 NQKEPTTCHTTVK----------LRGAPFNVTEKNVMEFLAPLKPVA-IRIVRNAHGNKT 334
Query: 340 KGIAYVLYAIPESASRAIEV 359
G +V ++ E +A++
Sbjct: 335 -GYIFVDFSNEEEVKQALKC 353
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTK---RSKGIAYVLYAIPES 352
L LF++NL + TE++L+E FSK G V I K+ S G +V Y PE
Sbjct: 544 LPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQ 603
Query: 353 ASRAIEVLDNSIFQGRLLHV 372
A +A++ L + G L V
Sbjct: 604 AQKALKQLQGHVVDGHKLEV 623
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 129/336 (38%), Gaps = 69/336 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLP EL+E F FG++ V + T A V + P A +A L
Sbjct: 406 ILVKNLPAGTLAAELQETFGHFGSLGRVLLPEGGIT------AIVEFLEPLEARKAFRHL 459
Query: 361 DNSIFQGRLLHVMPAR----HKKSSDKQELHNSTSQG---------TKTLKQRREEERKA 407
S F L++ A + K++L ++ S+ T + E+E
Sbjct: 460 AYSKFHHVPLYLEWAPVGVFSSTAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPT 519
Query: 408 SEASGNTKA-----------------WNSLFMRP---DTVVENIAR---KHGVSKSDLLD 444
E + N+ A +LF++ DT E + K G KS +
Sbjct: 520 EEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSIS 579
Query: 445 REANDLAVRIALG----ETQVIAETKKALTNAGVNVS-------SLEEFSAGKTDGLKRS 493
++ N V +++G E + + +KAL +V + E + L R
Sbjct: 580 KKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARK 639
Query: 494 NHV--------FLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-------LALVVFL 538
V LV+N+P+ + E+ ++F FG L V LP T V FL
Sbjct: 640 KQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFL 699
Query: 539 EPVEAAAAFKGLAYKRY-KGVPLYLEWAPSDVLSQS 573
+A AF L + + G L LEWA S+V Q+
Sbjct: 700 TKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQA 735
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR--TKDGKSRQFAFIGFRTEQEAEEAI 58
S+I V+N+P +R+ FS GE+ +L + T G R F F+ F T+Q+A+ A
Sbjct: 649 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 708
Query: 59 KYF-NKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 709 NALCHSTHLYGRRLVLEWA 727
>gi|157865391|ref|XP_001681403.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68124699|emb|CAJ02743.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 950
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 177/670 (26%), Positives = 294/670 (43%), Gaps = 114/670 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-------EITDAKLMRT-----------KDGKSRQ 42
SR+ + NLP TE++L+ + EITD + +R K K RQ
Sbjct: 2 SRVRILNLPNDCTEEQLKQHLLRTAPREAPLLEITDVQFIRRPATATDRNHHHKHQKQRQ 61
Query: 43 -----------------FAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMP 85
AF+GFRT +YFN S+ + R+ E+A+ + + +
Sbjct: 62 GSVGAVAAAKAPKMILRMAFVGFRTSAAGHFVAQYFNSSFFRSSRLKVELAKGLNEVGIT 121
Query: 86 RPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMW 145
R ++++E + D KN +A G + + Q + + +
Sbjct: 122 LNQLRKRQQQQQEETSDRKNKRKSAADGAHASGLTSSTTSREQATTRKRARDGDREDEQK 181
Query: 146 ANDT---LIGLMADQKAKVSENISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAA 202
+DT L +A ++ + E S+A +G + L + D S T + ++ KN A
Sbjct: 182 DSDTGATLADSLARRQREFVELRSKATEGPTWAAELLLAPDTSP--TAAADDDEQKNFAM 239
Query: 203 DELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHN--GDSNEE--CD 258
DE K++ ++ +E +GD +DDD+ E+E + G+ ++
Sbjct: 240 DE--------KTQQRRRHQQAERHTADSGDANDDDEAEQERRALSRQQALGEVSDMDFLS 291
Query: 259 SIIKDSIHSGV------------------GEEDANGEI----------VDPG------NP 284
+ S HS V + D +G+I PG +
Sbjct: 292 GLAGSSTHSAVDAKVTARREDDADDVAFLCDNDVDGDIPATAVNTASATSPGKKGIDHDA 351
Query: 285 SSSSKDVQQEVLE-SGRLFVRNLPYTATEDELREHFSKF-GNVSEVHIVVDKDTKRSKGI 342
++ +++ Q+E+ S R+ + N+PY ATE+ L++ + G V VHI + KDT+++KG
Sbjct: 352 AAMTQEAQEEIARASHRIRLGNIPYIATEEHLKQFAASLVGPVEAVHIPLTKDTRQNKGA 411
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR---HKKSSDKQE-------------- 385
A+V ++ E A RA+++ +I GRLL V A H K ++E
Sbjct: 412 AFVRFSSAEDAVRALQLCRGAILMGRLLRVSAAEEDPHSKRVMEREAALASTAAAQAADG 471
Query: 386 -LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD 444
L + G+ + K++RE +R+ E G WN+++M VE +A++ GV D++
Sbjct: 472 ALSGANLAGSSSFKKQREADRRGKEGGGGQMTWNTMYMNSHAAVETVAQRLGVRSEDVVG 531
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGL--KRSNHVFLVKNL 502
A AVR A+ E + +E + L++ G+ LE G T RSN LVKNL
Sbjct: 532 VGAKGAAVRAAIAEAYLTSEVQHVLSDEGIAFDLLE----GATQNFLKSRSNTTILVKNL 587
Query: 503 PY--DSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPL 560
+ EL K+F +FG L+ PS T AL + P +A AF L+YK +K PL
Sbjct: 588 QLKDGNDAAELTKLFVRFGVLETSAFPSAGTCALFRYTHPQDARIAFTRLSYKLFKTAPL 647
Query: 561 YLEWAPSDVL 570
+LEWAP L
Sbjct: 648 FLEWAPVGAL 657
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS------KGIAYVLYAIPESA 353
+L V+NLP+ ATE ++RE FS F + V + T S +G A+V + A
Sbjct: 865 KLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHTFSSHRENNHRGFAFVEFLSEAEA 924
Query: 354 SRAIEVLDNSIFQGRLL 370
+RA+E L + GR L
Sbjct: 925 ARALETLKATHLYGRHL 941
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 610 PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL--KNGKNVSMGFGFI 667
P + + L VKNL F+ ++++R+ F E R + V K H + +N GF F+
Sbjct: 858 PPGSDPQKLIVKNLPFEATEKDVRELFSA-FSEIRTVRVPRKSHTFSSHRENNHRGFAFV 916
Query: 668 EFDSVETATNVCRDLQGTILDGHALILQLCHAKKD 702
EF S A L+ T L G L+LQ +AK D
Sbjct: 917 EFLSEAEAARALETLKATHLYGRHLVLQ--YAKLD 949
>gi|341898155|gb|EGT54090.1| hypothetical protein CAEBREN_29703, partial [Caenorhabditis
brenneri]
Length = 466
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/372 (34%), Positives = 195/372 (52%), Gaps = 65/372 (17%)
Query: 410 ASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLA-VRIALGETQVIAETKKA 468
A +WN+LF+ + + + +A++ V KSDLL + + A VR+AL ET+++ ET+
Sbjct: 55 AGKTAHSWNALFLGANAIADTLAQRLNVKKSDLLTSDQGESAGVRLALAETRLVRETRDF 114
Query: 469 LTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS 528
GV L+ FS KRS+ V L KNLP EL +MF KFG KV++PS
Sbjct: 115 FLENGVK---LDAFS---KPAEKRSDTVILAKNLPAGVETEELQRMFEKFGDCQKVLMPS 168
Query: 529 TKTL-ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKG-NQKNDAVV 586
+ ALV+ PV+A AF+ LAY R++ PLYLEWAP DVL + G +QK++
Sbjct: 169 EGGVSALVIMGNPVDAKKAFRALAYSRFRSQPLYLEWAPFDVLGATEPPVGTDQKSEEPQ 228
Query: 587 GEHDAKRALLEQQ--------LEGVTD---------------------ADIDPDR----- 612
+KR + ++ +G+T+ ++ P +
Sbjct: 229 KPKKSKREMTYEEKKKERKNRQQGITEEDEEREGEEDEGETEDKKPETSETKPKKASKKQ 288
Query: 613 ----VESRS-LFVKNLNFKTCDENL----RKHFGEHIKEGRILSVKVKKHLKNG---KNV 660
+ES S +FVKNL F T D+ L RK +G+ +K S ++ K L K +
Sbjct: 289 SEKEIESGSAIFVKNLAFDTTDDGLDSLFRKRYGDLVK-----SAQISKKLNPAEPTKPL 343
Query: 661 SMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKK-DEQVVKKAE---KDKS-S 715
SMGFGF++F + A +++QG +LDGH+L L++ H + D+ +K+ E KD+
Sbjct: 344 SMGFGFVQFYTSLDAKQALKEMQGELLDGHSLELKISHRENVDKGALKRKEIRQKDQGEC 403
Query: 716 TKLLVRNVAFEA 727
TKLLVRN+ FEA
Sbjct: 404 TKLLVRNLPFEA 415
>gi|403224006|dbj|BAM42136.1| uncharacterized protein TOT_040000506 [Theileria orientalis strain
Shintoku]
Length = 760
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 137/510 (26%), Positives = 229/510 (44%), Gaps = 94/510 (18%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDK---------DTKRSKGIAYVL 346
++ R+ + NLPY+ TE+ +R FG V ++HI + K +++ +KG+ YV
Sbjct: 205 VDMNRVVIFNLPYSVTEEAIRSLVKPFGKVEQIHIPLLKYDYSDPSSMESRATKGMCYVT 264
Query: 347 YAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEE-- 404
+ A +E + SIF GR++ + A+ K ++ ++ K +RR EE
Sbjct: 265 FCFESDAVNFVEQKNKSIFSGRIITIALAKSKHQEEE-----GPARVEKYHNKRRNEETY 319
Query: 405 -----RKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGET 459
+K E GN WN+L + + I+ + GVS ++L E + V +AL E+
Sbjct: 320 SKFKMKKRKEEIGNQDIWNALHIDIHAAIRTISAELGVSSEEILKGE--EAGVNVALSES 377
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
++ + KK L + GVN AG D ++KNLPY++ + EL ++FG G
Sbjct: 378 YILNKLKKWLEDQGVN------HEAGDYDQEDLHEDTLMIKNLPYNADDRELIRLFGSCG 431
Query: 520 SLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGN 579
+ + K L LV + E AF+ L+YK YK +P+YL+ +L S+T K N
Sbjct: 432 QIVRFATSPYKLLGLVQYSNKHECDRAFRTLSYKMYKSLPIYLQRVAKKLLPNSATIKTN 491
Query: 580 QK---------------------NDAVVGEHDAKRALLEQQLEGVTDAD----------- 607
K V G D ++ LE D D
Sbjct: 492 TKLIEEAREGMESDHVDGRSTSSGTRVGGTEDVGQSDLEHTSRSRDDKDATNYRGDDATN 551
Query: 608 IDPD--------------RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKH 653
+DPD R+ S++V N++ +E L KHF +G ++S K+ +
Sbjct: 552 LDPDDDNEDEFTKEEENNRIGHVSVYVSNIDASVDEEELEKHFASL--KGYVIS-KIIRP 608
Query: 654 LKNGKNVS-------MGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV 706
++ G + S +GFIEFDS+E A + GT++ G + L+L K++Q +
Sbjct: 609 IQGGSDESDKSKADRPRYGFIEFDSIENAKEAIKRRCGTVVAGKLINLELS---KNKQTI 665
Query: 707 KKAEKDKSSTK------LLVRNVAFEAQRK 730
K K K ++V+N+ F+A +K
Sbjct: 666 SKHRKKKEGGPTEENDVIIVKNLPFQATKK 695
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE---IT--DAKLMRTKDGK-------SRQFAFIGF 48
SR+ +KN+P + L S+K +T D KL+ + SR ++GF
Sbjct: 10 SRLIIKNIPNSLDNKLLDKLISKKCRDIGVTKCDLKLLTKEKKVNKEVKRVSRGICYVGF 69
Query: 49 RTEQEAEEAIKYFNKSYLDTCRISCEIARKVG 80
+E++A + +K+++ SY ++C++S E ++ G
Sbjct: 70 ASEKDATKFMKHYDNSYFNSCKVSIEYSKSPG 101
>gi|390354769|ref|XP_003728404.1| PREDICTED: probable RNA-binding protein 19-like [Strongylocentrotus
purpuratus]
Length = 384
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/286 (39%), Positives = 164/286 (57%), Gaps = 23/286 (8%)
Query: 454 IALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAK 513
+ALGETQ++AET++ L + GV + S + +A RS VFLVKNLP ++ EL +
Sbjct: 1 MALGETQIVAETRQFLLDNGVLLDSFSQAAAA------RSKSVFLVKNLPASTTPEELRE 54
Query: 514 MFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQS 573
+F + G L +V++P ++V FLEP EA AAF LAY ++K VPLYLEWAP DV S
Sbjct: 55 VFSQHGMLGRVLMPPAGVTSIVEFLEPTEARAAFYQLAYTKFKHVPLYLEWAPMDVFGTS 114
Query: 574 STSKGNQKNDAVVGEHDAKRALLEQQLEGV----TDADIDPDRVESRSLFVKNLNFKTCD 629
K +K AV + K+ LE+ + +++D + E LFVKNLNF T +
Sbjct: 115 --IKSLEKTPAVEETKEEKKEELEEVRKEEPQEESESDDEHQVQEGSVLFVKNLNFSTDE 172
Query: 630 ENLRKHFGEHIKEGRILSVKV--KKHLKN-GKNVSMGFGFIEFDSVETATNVCRDLQGTI 686
L+K F K G I +V + KK KN G+ +SMG+GFIEF+ E A ++ Q
Sbjct: 173 SILKKAFK---KCGSIRNVTIARKKDTKNQGELLSMGYGFIEFEKPEWAQKALKEYQHVE 229
Query: 687 LDGHALILQL-----CHAKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
++GH + L++ ++ K+ K + STK+LVRN+ FEA
Sbjct: 230 VEGHNVELKISNRSTVQTQQSSSRKKQKAKKQMSTKILVRNIPFEA 275
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-------STKTLALVVFLEPVEAAAAFKGL 550
LV+N+P+++S E+ ++F FG + V LP S + V FL +A AF L
Sbjct: 267 LVRNIPFEASSREIRELFITFGEVKTVRLPKKMSGTGSHRGFGFVDFLSKQDAKRAFDSL 326
Query: 551 AYKRY-KGVPLYLEWAPSD 568
+ + G L LEWA S+
Sbjct: 327 CHSSHLYGRRLVLEWAESE 345
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 287 SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR-----SKG 341
S D + +V E LFV+NL ++ E L++ F K G++ V I KDTK S G
Sbjct: 147 SESDDEHQVQEGSVLFVKNLNFSTDESILKKAFKKCGSIRNVTIARKKDTKNQGELLSMG 206
Query: 342 IAYVLYAIPESASRAI 357
++ + PE A +A+
Sbjct: 207 YGFIEFEKPEWAQKAL 222
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 285 SSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKD-TKRSKGIA 343
SSS K + + S ++ VRN+P+ A+ E+RE F FG V V + T +G
Sbjct: 250 SSSRKKQKAKKQMSTKILVRNIPFEASSREIRELFITFGEVKTVRLPKKMSGTGSHRGFG 309
Query: 344 YVLYAIPESASRAIEVLDNS 363
+V + + A RA + L +S
Sbjct: 310 FVDFLSKQDAKRAFDSLCHS 329
>gi|389600475|ref|XP_001562851.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504386|emb|CAM37284.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 943
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 182/679 (26%), Positives = 292/679 (43%), Gaps = 128/679 (18%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-------EITDAKLMRT------KDGKSRQ----- 42
SR+ + NLP TE++L+ + EITD + +R +D +Q
Sbjct: 2 SRVRILNLPADCTEEQLKQHLLRTAPRDAPLLEITDVQFIRRPATALDRDHHHKQRRGCL 61
Query: 43 --------------FAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPW 88
AF+GFRT +YFN+S+ + + E+A+ + + +
Sbjct: 62 SAVAAAKAPKMILRMAFVGFRTSAAGHFVAQYFNRSFFRSACLKVELAKGLNEVGVTLNQ 121
Query: 89 SRYSLKKEKEVSEDEKNPVLAA---------------KRGEKKTIEK------------- 120
R KKE+E S + L++ GE+ T K
Sbjct: 122 LRKQKKKEEEKSNNTNKAKLSSGAADGSHASGLTSSTTAGEQATTRKRARDNDREDGKDG 181
Query: 121 -----VTENDD--PQLLEFLQVMQPRVKSKMWANDTLI----------GLMADQKAKVSE 163
T +DD + EF+++ + WA + L+ G A++K + E
Sbjct: 182 GDTGNTTADDDLARRQREFVELRSKATEGPTWAAEVLLAPDNTPTASMGKEAERKCAMDE 241
Query: 164 NISQAIKGGEKSITLHVKSDKSNVITDSQATEK----SKNAAADELMSDMDYFKSRVKKD 219
+ + + HV D N +S+ ++ S+ A E+ SDMD+
Sbjct: 242 KTQRHRR--RQKAEGHVP-DVGNTDGESEVEQERWALSRQQALGEV-SDMDFLARLAGAP 297
Query: 220 WSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIV 279
++ +++A +DD D G E+ +GD N S DS S +E G +
Sbjct: 298 THNAVDAEETARREDDADVGASVSED----DGDGNIPATSTNTDS--STKSKEKEFGHVA 351
Query: 280 DPGNPSSSSKDVQQEVLE-SGRLFVRNLPYTATEDELREHFSKF-GNVSEVHIVVDKDTK 337
++++ + Q+E+ S R+ + N+PY ATE+ L++ + G V VHI + KDT+
Sbjct: 352 -----TATTHEAQEEIARASHRIRLGNIPYIATEEHLKQFATSLVGPVEAVHIPLTKDTR 406
Query: 338 RSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR---HKKSSDKQE--------- 385
++KG A+V + E A RA+ + +I GRLL V A H K ++E
Sbjct: 407 QNKGAAFVRFFSAEDAVRALRLCRGAILMGRLLRVSAAEEDPHSKRVMEREAALASAAAA 466
Query: 386 ------LHNSTSQGTKTLKQRREEERKASEASGNTK----AWNSLFMRPDTVVENIARKH 435
L + G+ K++RE +R+ EA WN+++M VE +A++
Sbjct: 467 QGTTDALSRANLSGSSQFKKQREADRRGGEAGKEGGGGQITWNTMYMNSHAAVETVAQRL 526
Query: 436 GVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGL--KRS 493
GV D++ A AVR A+ E + +E + L++ G+ LE G T L RS
Sbjct: 527 GVRSEDVVGVGAKGAAVRAAIAEAYLASEVQHVLSDEGIACDVLE----GATQNLLKSRS 582
Query: 494 NHVFLVKNLPY--DSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLA 551
N LVKNL EL K+F +FG L+ PS T AL F P +A AF L+
Sbjct: 583 NTTILVKNLQLKDGGDAAELTKLFVRFGVLETSAFPSAGTFALFRFTHPQDARIAFMRLS 642
Query: 552 YKRYKGVPLYLEWAPSDVL 570
YK +K PL+LEWAP L
Sbjct: 643 YKLFKAAPLFLEWAPVGAL 661
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS------KGIAYVLYAIPESA 353
+L V+NLP+ ATE ++RE FS F + V + T S +G A+V + A
Sbjct: 858 KLIVKNLPFEATERDVRELFSAFSEIRSVRVPRKSHTFSSHRENNHRGFAFVEFLSEVEA 917
Query: 354 SRAIEVLDNSIFQGRLL 370
+RA+E L ++ GR L
Sbjct: 918 ARALETLKSTHLYGRHL 934
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 588 EHDAKRALLEQQLEGVTDADID----PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEG 643
E DA + + + GVT + P + + L VKNL F+ + ++R+ F E
Sbjct: 825 EADATKTAVLARRRGVTSSAATSSEVPPGSDPQKLIVKNLPFEATERDVRELFSA-FSEI 883
Query: 644 RILSVKVKKHL--KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKK 701
R + V K H + +N GF F+EF S A L+ T L G L+LQ +AK
Sbjct: 884 RSVRVPRKSHTFSSHRENNHRGFAFVEFLSEVEAARALETLKSTHLYGRHLVLQ--YAKL 941
Query: 702 D 702
D
Sbjct: 942 D 942
>gi|401416828|ref|XP_003872908.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489134|emb|CBZ24386.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 819
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 191/386 (49%), Gaps = 51/386 (13%)
Query: 283 NPSSSSKDVQQEVLE-SGRLFVRNLPYTATEDELREHFSKF-GNVSEVHIVVDKDTKRSK 340
+P++ +++ Q+E+ S R+ + N+PY ATE+ L++ + G V VHI + KDT+++K
Sbjct: 219 DPAAMTQEAQEEIARASHRIRLANIPYIATEEHLKQFAASLVGPVESVHIPLTKDTRQNK 278
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR---HKKSSDKQE------------ 385
G A++ ++ E A RA+++ +I GRLL V A H K ++E
Sbjct: 279 GAAFMRFSSGEDAVRALQLCRGAILMGRLLRVSAAEEDPHSKRVMEREAALASTAAAQAA 338
Query: 386 ---LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDL 442
L+ +T G+ K++RE +R+ E G WN+++M VE +A++ GV D+
Sbjct: 339 NGALNGATLAGSSQFKKQREADRRGKEGGGGQVTWNTMYMNSHAAVETVAQRLGVRSEDV 398
Query: 443 LDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGL--KRSNHVFLVK 500
+ A AVR A+ E + +E ++ L++ G+ LE G T RSN LVK
Sbjct: 399 VGVGAKGAAVRAAIAEAYLTSEVQQVLSDEGIAFDLLE----GATQNFLKSRSNTTILVK 454
Query: 501 NLPY--DSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGV 558
NL + EL K+F +FG L+ PS T AL + P +A AF L+YK +K
Sbjct: 455 NLQLKDGNDAAELTKLFVRFGVLETSAFPSAGTFALFRYTHPQDARIAFTRLSYKLFKTA 514
Query: 559 PLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPD------- 611
PL+LEWAP L + G + + V D L G AD DPD
Sbjct: 515 PLFLEWAPVGALMED----GEGGSASAVAASDLG-------LVGGPSADNDPDADTGDSA 563
Query: 612 -----RVESRSLFVKNLNFKTCDENL 632
+ +LF+ N+ F+T ++ L
Sbjct: 564 AAVVAKAMVYTLFLTNIPFQTTEDEL 589
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEV------HIVVDKDTKRSKGIAYVLYAIPESA 353
+L V+NLP+ ATE ++RE FS F + V H +G A+V + A
Sbjct: 734 KLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHAFSSHRENNHRGFAFVEFLSEAEA 793
Query: 354 SRAIEVLDNSIFQGRLL 370
+RA+E L + GR L
Sbjct: 794 ARALETLKATHLYGRHL 810
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 610 PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL--KNGKNVSMGFGFI 667
P + + L VKNL F+ ++++R+ F E R + V K H + +N GF F+
Sbjct: 727 PPGSDPQKLIVKNLPFEATEKDVRELFSA-FSEIRTVRVPRKSHAFSSHRENNHRGFAFV 785
Query: 668 EFDSVETATNVCRDLQGTILDGHALILQLCHAKKD 702
EF S A L+ T L G L+LQ +AK D
Sbjct: 786 EFLSEAEAARALETLKATHLYGRHLVLQ--YAKLD 818
>gi|324509584|gb|ADY44027.1| RNA-binding protein 19 [Ascaris suum]
Length = 567
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 137/245 (55%), Gaps = 13/245 (5%)
Query: 330 IVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNS 389
++++K T KG A V Y PE+A A LD +IF+GR+LHV+ +K+E
Sbjct: 1 MIINKKTGMCKGFAIVTYVFPENAVAAFSALDGTIFKGRMLHVLAG-----DEKREPKAE 55
Query: 390 TSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAND 449
G K+ Q+ E+ K +G +WN+LF+ + V + +A K V KSDLL E
Sbjct: 56 IIDGVKSAFQK-EKAAKLKANAGKAHSWNALFLGANAVADTLAAKLNVEKSDLLSGEGET 114
Query: 450 LA-VRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSE 508
A VR+AL ET+++ ET++ L AGV + + +A KRS V LVKNLP
Sbjct: 115 SAGVRLALAETRLVRETREFLLAAGVCLDAFSRPAA------KRSATVILVKNLPAGVEV 168
Query: 509 GELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSD 568
EL +MF +FG + + ++P A++ V+A AF+ LAY R++ PLYLEWAP D
Sbjct: 169 DELQRMFERFGPIKRALMPPEGVSAIIEMDNTVDARNAFRALAYSRFRAQPLYLEWAPFD 228
Query: 569 VLSQS 573
V ++S
Sbjct: 229 VFARS 233
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 11/122 (9%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
++FVKNLNF T DE+L K F K + K + K++SMGFGF++F S E A
Sbjct: 340 TVFVKNLNFDTTDESLFKKFSSKFKVRSAIVSKKRDPSDPAKSLSMGFGFVKFYSTEDAQ 399
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS--------STKLLVRNVAFEAQ 728
+++QG +LDGH L L+L H E+ V ++ K KS TK++VRN+ F+A
Sbjct: 400 RALKEMQGILLDGHCLELKLSH---REEAVDESRKRKSVSRLQQGDCTKIMVRNIPFQAT 456
Query: 729 RK 730
RK
Sbjct: 457 RK 458
>gi|84996687|ref|XP_953065.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304061|emb|CAI76440.1| hypothetical protein, conserved [Theileria annulata]
Length = 716
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 242/492 (49%), Gaps = 56/492 (11%)
Query: 271 EEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHI 330
EED++G N S+ S ++ + R+ + NLPY TE+ +R+ FG V ++HI
Sbjct: 183 EEDSSGIGFKTENFSTDSSNI-----DMNRVVIFNLPYNVTEEMIRKLVKPFGKVEQIHI 237
Query: 331 VVDK-------------DTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARH 377
++K ++ ++G+ +V + A + IE +NSIF GR++ + H
Sbjct: 238 PLNKRNISEITTGNNVSESAITRGMCFVTFCFESDALKFIEEKNNSIFSGRIITI---SH 294
Query: 378 KKSSDKQELHNSTSQGTKTLKQRREE--------ERKASEASGNTKAWNSLFMRPDTVVE 429
KS++ + +G K + +E ++K SE T WN L + ++ ++
Sbjct: 295 AKSNNLKFFQKYIPKGKKYRNKDTDETSYSEFKAKKKRSEIENRT-IWNILHIDINSAIK 353
Query: 430 NIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDG 489
+IA +S ++L E V A+ E+ ++ + KK L++ G+N E + +
Sbjct: 354 SIASDLRISPEEILKGE--QAGVNAAISESFILNKVKKWLSDQGIN----SEVTNYNEED 407
Query: 490 LKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKG 549
L V L+KNLP+D+ + EL ++F G + K K L LV F E+ AF+
Sbjct: 408 LYED--VLLIKNLPHDTEDRELIRLFSSCGKIIKFTTSPFKLLGLVQFSSKTESEKAFRT 465
Query: 550 LAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADID 609
L+YK ++ +PLYL+ P +L +T + +D+ + E + K + + + D
Sbjct: 466 LSYKMFQNLPLYLQKVPKSLLPNLNTVNSDHTDDS-INELNDKVDDTDSDDQLDDKIESD 524
Query: 610 PDRVESR----SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKH-LKNGKNVSMGF 664
DR+E+R S++V N++ +E KHF +G ++S +K H K + + +
Sbjct: 525 -DRIENRIGHVSVYVSNIDGNVSEEEFEKHFSSL--KGFVISKIIKPHGSKLEEKGGVRY 581
Query: 665 GFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTK------L 718
GFIEFD+V A + L GT++ + L+L K++Q + K +++K +
Sbjct: 582 GFIEFDNVNNAKEAIKRLCGTVIGSKIITLELS---KNKQTISKYDRNKEEGPKEENDVI 638
Query: 719 LVRNVAFEAQRK 730
+V+N+ F+A +K
Sbjct: 639 IVKNLPFQATKK 650
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST----- 529
N ++ ++ K +G K N V +VKNLP+ +++ EL ++F + ++ V +P +
Sbjct: 616 NKQTISKYDRNKEEGPKEENDVIIVKNLPFQATKKELLELFKYYANVKTVRIPKSAGNTH 675
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
+ VVF+ +A A + L G L L++
Sbjct: 676 RGFGFVVFMSKNDAKLAMENLKNVHLYGRRLVLQYV 711
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE-----ITDAKLMRTKDGK--------SRQFAFIG 47
SR+ +KN+P + L ++K + +D +L+ TK+ K SR ++G
Sbjct: 10 SRLIIKNIPNSLDNKSLDKLITKKCKDLGVTKSDIRLL-TKEKKVNNELKRISRGICYVG 68
Query: 48 FRTEQEAEEAIKYFNKSYLDTCRISCEIARK 78
F +E +A + + ++N SY ++C+++ E +++
Sbjct: 69 FLSENDATKFLNHYNNSYFNSCKVTIEYSKR 99
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E+ + V+NLP+ AT+ EL E F + NV V I +G +V++ A A
Sbjct: 634 ENDVIIVKNLPFQATKKELLELFKYYANVKTVRIPKSAGNTH-RGFGFVVFMSKNDAKLA 692
Query: 357 IEVLDNSIFQGRLL 370
+E L N GR L
Sbjct: 693 MENLKNVHLYGRRL 706
>gi|123485368|ref|XP_001324476.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121907359|gb|EAY12253.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 576
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 208/411 (50%), Gaps = 38/411 (9%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ + RL+V+N+PY +T +E++ F +FG V +V + + ++G A+V +A ESA++
Sbjct: 189 ITTTRLYVKNIPYKSTAEEIKARFEEFGPVEDVSLPTSEVPGENRGFAFVKFADLESATK 248
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
A + + IF+GR L + + + K +L Q + KQ+R ++ + +
Sbjct: 249 A--YMTSVIFEGRHLQLAQSEPEPEKKKVDLIPDDDQTFQEKKQQRLKQYRP-------E 299
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVN 475
N L M +T+ + IA + GV+K+D+L+ E++++ R+A+ E+Q+I ETK+ G++
Sbjct: 300 TMNPLIMDKNTIADAIADRIGVTKADVLNPESDNVMARLAIAESQLIEETKQLFIEHGID 359
Query: 476 VSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALV 535
V +L E D + S V ++KNL ++++E EL +F G+L + +L T ++A+V
Sbjct: 360 VDALNE-GFKSADKINYSKTVLIIKNLRWETTEEELRGIFASKGTLVRFVLAPTHSVAIV 418
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRAL 595
F +A AF L Y+ P+Y++WAP +T G + + E + R
Sbjct: 419 EFARGDDARKAFNSLNYRLLHDTPIYIQWAPDGC----TTGTGVETD-----ERKSCRPK 469
Query: 596 LEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLK 655
+E +++ +L VKNL F ++ +H+ G I ++++ K K
Sbjct: 470 VE---------------IKTTTLIVKNLPFTVTKKSEIAEAFKHV--GNIKAIRMTK--K 510
Query: 656 NGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV 706
+ GF FI+F + + A +Q L G LI+Q K E V
Sbjct: 511 RNEQGHRGFCFIDFTTRQAAQAAFDAMQDVHLAGRHLIVQPAEEGKRETSV 561
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ ++NLPK V E L FS+ GEITD K++RT+ GKSR A+IG++T +EAE+A KY
Sbjct: 7 SRLFIRNLPKSVEEKELVKEFSKMGEITDCKVIRTERGKSRCIAYIGYKTVEEAEKAQKY 66
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
F+ +++ + RI E A +G+ + W+R KK ++ + ++ + R K ++
Sbjct: 67 FDNTFIQSRRIGVEFAIPIGEKQLDETWARR--KKFAKIEKQQEKQIEKFNRDNK---DQ 121
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMW 145
E DP EFL +PR W
Sbjct: 122 PKEKFDPAFQEFLAAHKPRQMRASW 146
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RLF+RNLP + E EL + FSK G +++ V+ + +S+ IAY+ Y E A +A +
Sbjct: 8 RLFIRNLPKSVEEKELVKEFSKMGEITDCK-VIRTERGKSRCIAYIGYKTVEEAEKAQKY 66
Query: 360 LDNSIFQGRLLHV 372
DN+ Q R + V
Sbjct: 67 FDNTFIQSRRIGV 79
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 296 LESGRLFVRNLPYTAT-EDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+++ L V+NLP+T T + E+ E F GN+ + + ++ + +G ++ + ++A
Sbjct: 472 IKTTTLIVKNLPFTVTKKSEIAEAFKHVGNIKAIRMTKKRNEQGHRGFCFIDFTTRQAAQ 531
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELH 387
A + + + GR L V PA K E++
Sbjct: 532 AAFDAMQDVHLAGRHLIVQPAEEGKRETSVEMN 564
>gi|340055425|emb|CCC49744.1| putative RNA-binding protein, fragment, partial [Trypanosoma vivax
Y486]
Length = 853
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 157/580 (27%), Positives = 257/580 (44%), Gaps = 87/580 (15%)
Query: 42 QFAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDP----NMPRPWSRYSLKKEK 97
+ AF+GFR +K+F+ +Y ++ +A+ + D NM + R
Sbjct: 48 RMAFVGFRNATCGHFVVKHFDGTYFGASKMRVGLAKGLADVGVTVNMKKKEQRQLRVAGL 107
Query: 98 EVSEDEKNPVLAA-------------KRG--------EKKTIEKVTENDDPQLL------ 130
VSE AA +RG +K + E++ + L
Sbjct: 108 GVSEPSNTSTAAALHKGKDSNTSVKRQRGLVSAAVPEQKVEVPGDAESEGEEQLRKRKRK 167
Query: 131 -EFLQVMQPRVKSKMWANDTLI----GLMADQKAKVSENISQAIKGGEKSITLHVKSDKS 185
EF+ WA + L+ G +D EN GE+ V + S
Sbjct: 168 EEFIADRTRATSGPTWAAEVLVPESSGQPSDGGVGAGENAC-----GEQIPDECVDEELS 222
Query: 186 NVITDSQATEKSKNAAADELMSDMDYFKSRVKK--DWSDSESEDDSAGDDDDDDDGEEEE 243
+ D +A E+ + +SDM++ S KK D +SE A ++ E
Sbjct: 223 DE-ADRRALERQQTLGT---VSDMEFLSSLAKKPADACNSEGGTGDANSPINNITDETRT 278
Query: 244 EEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFV 303
EE H ECD+ + +++ D + V ES R+ +
Sbjct: 279 EEVMRHGEKGKSECDAKVM----------------------TTADNDDEAIVRESRRVRL 316
Query: 304 RNLPYTATEDELREHFSK-FGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDN 362
N+P+ ATED++++ S G V VHI + +DT++SKG A+V + + A RA+ +
Sbjct: 317 GNIPFIATEDDVKQFASSHVGPVEAVHIPLTRDTRQSKGAAFVKFVRVDDALRALTLCRG 376
Query: 363 SIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQ-----RREEERKASEASGNTKAW 417
+IF GRLL V A K E + T G+ K+ RR+E + ++ +W
Sbjct: 377 AIFMGRLLRVAAAVDDPYGKKVEENGVTLAGSSDFKRQKALNRRKEAEEVGKSGTAPPSW 436
Query: 418 NSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVS 477
+ +M T VE +A++ GV+ ++ EA AVR A+ E + +E ++ L + G++ S
Sbjct: 437 SGTYMSSHTAVEVVAKRLGVTSGTVVSVEARGAAVRAAIAEAYLTSEVRQVLGDEGIDFS 496
Query: 478 SLEEFSAGKTDGL--KRSNHVFLVKNL----PYDSSEGELAKMFGKFGSLDKVILPSTKT 531
L+ G L RSN LVKN+ P D+++ L+K+F ++G+L+ PS+
Sbjct: 497 LLD----GTQGNLLKARSNTTILVKNITLTQPEDATQ--LSKLFLRYGTLESTAFPSSGA 550
Query: 532 LALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS 571
AL F +A AF+ L+YK +K VPL+LEWAP V+S
Sbjct: 551 FALFRFAHSQDARIAFQRLSYKLFKNVPLFLEWAPIGVIS 590
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRT-------KDGKSRQFAFIGFRTEQEA 54
++ VKN+P TE +RD FS E+ +L R + R FAF+ F TEQEA
Sbjct: 768 KLVVKNVPFEATERDIRDLFSAVSEVHGVRLPRKNHQFSSHRQNNHRGFAFVEFLTEQEA 827
Query: 55 EEAIKYFNKSYL 66
A + ++L
Sbjct: 828 RRARESLGATHL 839
>gi|345313394|ref|XP_003429381.1| PREDICTED: probable RNA-binding protein 19-like, partial
[Ornithorhynchus anatinus]
Length = 271
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 139/269 (51%), Gaps = 39/269 (14%)
Query: 448 NDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSS 507
+AVR+ALGETQ++ E ++ L + GV + S + +A +RS V LVKNLP +
Sbjct: 4 GSVAVRVALGETQLVQELRRFLLDHGVCLDSFSQAAA------ERSKSVMLVKNLPAGTR 57
Query: 508 EGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPS 567
EL ++FG+FG L +V+LP A+V FLEP +A AF LAY ++ VPLYLEWAP
Sbjct: 58 ATELEEIFGRFGGLGRVLLPDGGVTAIVEFLEPAQARRAFTHLAYSKFHHVPLYLEWAPM 117
Query: 568 DVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADID------------------ 609
+ S K + GE +A+ E +G TD DI+
Sbjct: 118 GIFGSSDPQK-EAPPEGPAGEENARA---EAGADGETDVDINGLPGEEAEAEKEEEKEEE 173
Query: 610 -------PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-KKHLKNGKNVS 661
+ + +LF+KNLNF T +E L++ F K G + + + KK + G S
Sbjct: 174 EEDEEDEDENLPGCTLFIKNLNFSTTEETLKEAFS---KAGAVRTCSISKKTNRAGTQHS 230
Query: 662 MGFGFIEFDSVETATNVCRDLQGTILDGH 690
+GFGF+ + E A R LQG ++DGH
Sbjct: 231 LGFGFVGYRRPEQAQKALRQLQGCLVDGH 259
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKD---TKRSKGIAYVLYAIPES 352
L LF++NL ++ TE+ L+E FSK G V I + T+ S G +V Y PE
Sbjct: 184 LPGCTLFIKNLNFSTTEETLKEAFSKAGAVRTCSISKKTNRAGTQHSLGFGFVGYRRPEQ 243
Query: 353 ASRAIEVLDNSIFQGRLLHV 372
A +A+ L + G + V
Sbjct: 244 AQKALRQLQGCLVDGHKVEV 263
>gi|221061355|ref|XP_002262247.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193811397|emb|CAQ42125.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 1049
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 202/423 (47%), Gaps = 60/423 (14%)
Query: 331 VVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHK------KSSDKQ 384
+++ D K A+V + P + RA + L+++IF+G++L V A+ K +K
Sbjct: 462 ILNSDLTNVKVYAFVNFMFPSACERAKQFLNHAIFRGKVLSVKYAKEKIGDYEYTEKEKN 521
Query: 385 ELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD 444
+ S +KT ++ E +K N WN L+ ++ + + +++ S + +L+
Sbjct: 522 NVFIKLSHDSKTSYKKILEIQKKRNCQ-NENIWNILYTDINSSIHSFCKENKCSPNSILN 580
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEF-------------SAGKTDG-- 489
+ ++AV ++L ET +I + K+ + G+ + + E+ + GKTDG
Sbjct: 581 IKDRNIAVNVSLTETYIINKMKEWIKKEGIYLEAFEQIYRKRDEGGEPSGETDGKTDGDN 640
Query: 490 --------------LKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALV 535
KRS+ +VKNL +++ E+ +F K+G L KV +A++
Sbjct: 641 PPGEEPSHTNHVVKYKRSDDTIIVKNLSIQTNQKEVISLFKKYGVLSKVSFSPYNNIAIL 700
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGN---QKNDAVVGEHDAK 592
F + A AF +Y RYK +PLYLEWAP ++ + G+ K + GE AK
Sbjct: 701 QFEKAENAKKAFISNSYIRYKKLPLYLEWAPMNLFQKKENQDGDGSSNKGETKSGEIPAK 760
Query: 593 RALLEQQLEGVTDAD-------IDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRI 645
A+ + + EG + + + S++VKNLNF T +E+L+K F + EG I
Sbjct: 761 EAVKKSEQEGAPKEEQHYSESESSDEEITHASIYVKNLNFNTKEEDLKKLFEKL--EGFI 818
Query: 646 LS--VKVKKHL--KNG--------KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALI 693
VK KK + KN K +S G+GF+EF S E A + L T LDGH L
Sbjct: 819 TCNIVKSKKAISKKNDEKGKEPEQKLLSQGYGFVEFKSKELALEAIKKLTATTLDGHVLE 878
Query: 694 LQL 696
L L
Sbjct: 879 LSL 881
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 12/88 (13%)
Query: 1 SRICVKNLPKYVTE-DRLRDFFSQKG----EITDAKLMRTKD-------GKSRQFAFIGF 48
+R+ +KN+PKY+ E D + FF KG +ITD K+M+ K +SR+ FIGF
Sbjct: 33 TRLIIKNIPKYMNEMDLKKHFFKMKGNYEFKITDIKIMKRKKIVKNKEIFESRKICFIGF 92
Query: 49 RTEQEAEEAIKYFNKSYLDTCRISCEIA 76
+ E K FN +Y++T +I E A
Sbjct: 93 INNTDCENFKKSFNNTYINTSKIVIEDA 120
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 305 NLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSI 364
NL + T++ELR+ FS FGN+ V I + RS+G A+V + AIE L ++
Sbjct: 914 NLAFQVTKEELRKLFSAFGNIKSVRIPKNA-YNRSRGYAFVEFMSKNECLTAIESLQHTH 972
Query: 365 FQGRLLHV 372
GR L +
Sbjct: 973 LYGRHLII 980
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 622 NLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRD 681
NL F+ E LRK F G I SV++ K N N S G+ F+EF S
Sbjct: 914 NLAFQVTKEELRKLFSAF---GNIKSVRIPK---NAYNRSRGYAFVEFMSKNECLTAIES 967
Query: 682 LQGTILDGHALILQLC 697
LQ T L G LI+
Sbjct: 968 LQHTHLYGRHLIIDFA 983
>gi|225563037|gb|EEH11316.1| multiple RNA-binding domain-containing protein [Ajellomyces
capsulatus G186AR]
Length = 801
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 169/319 (52%), Gaps = 33/319 (10%)
Query: 425 DTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSA 484
D V+ +++ + GVSKS+LLD ++D A+R A ET VI ETK ++ GVN+ S ++
Sbjct: 392 DAVMSSVSERLGVSKSELLDPTSSDAAIRQAHAETHVIQETKAYFSSNGVNLDSFKQ--- 448
Query: 485 GKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAA 544
+R N LVKN + ++ K+F FG + ++++P + T+A+V F+ E
Sbjct: 449 -----RERGNTAILVKNFSFGVKADDIRKLFEPFGQIKRLLMPPSGTIAIVEFVMADECQ 503
Query: 545 AAFKGLAYKRYKGVPLYLEWAPSDVLSQSST-SKGNQKNDAVVGE----HDAKRALLEQQ 599
AFKGLAY++ + L+LE AP D+ + +T S+ VV + D +A ++
Sbjct: 504 KAFKGLAYRKLGDLILFLERAPKDLFDEKATASRVIAPPPKVVSQTFSTSDTFKATETEE 563
Query: 600 LEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KN 656
E +E+ +LFV+NLNF T + L + F +G LS +VK +
Sbjct: 564 AETP---------LETSTLFVRNLNFSTTNARLTEVF--QPLDG-FLSARVKTKADPKRP 611
Query: 657 GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS-- 714
G+ +SMGFGF+EF + A +QG LD H L+++ H D ++ E +
Sbjct: 612 GETLSMGFGFVEFRTAAQAHAALATMQGYKLDQHELVVKTSHKAMDAAEERRREDNAKKL 671
Query: 715 ---STKLLVRNVAFEAQRK 730
TK+L++N+ F+A +K
Sbjct: 672 AMRGTKILIKNLPFQATKK 690
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 188/406 (46%), Gaps = 73/406 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D LR FS + ++TDA ++ R+ F+GF+T EA++A+ Y
Sbjct: 5 TRVFVSGLPPTFSNDELRKHFSTRYQVTDAHVI-----PKRRIGFVGFKTPTEAQDAVNY 59
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPR-------PWSRYS---LKKEK--------EVSED 102
FNK+Y+ +I+ E+AR V ++P P ++ LK + + +
Sbjct: 60 FNKTYIRMSKIAVEMARPVCSFSLPLYSALPTFPLCDFTEPPLKADPTEGFYEADRIPKV 119
Query: 103 EKNPVLAAKRGE-----------KKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLI 151
+ +P + K K+ ++V ++ DP+L E+L M+P ++SK WA+D ++
Sbjct: 120 DADPPVVGKANPRHATSTDFTTLKRKHDQVEQSLDPKLQEYLATMKPTIRSKTWADDGIL 179
Query: 152 ----GLMADQKAKVSENISQ--AIK------GGEKSITLHVKSDKSNVITDSQATEKS-- 197
G D +S ++ +IK G E ++ +V D+ +KS
Sbjct: 180 VNANGESTDSAQVISSGNTETPSIKAKRLKPGHEPTLKTKQTERLDDVTEDNSVAKKSVS 239
Query: 198 --------KNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDH 249
+ + SDMD+ +SR + E DD+D+G E E +
Sbjct: 240 FETEDEPEATSVEEAPKSDMDWLRSRTSRLLGLVE---------DDEDEGSHETTEIQEI 290
Query: 250 NGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQ---EVLESGRLFVRNL 306
+ + + ++ K +E + +P NP ++ ++ E+GRLFVRNL
Sbjct: 291 EENYDRDIENARKRK-----AQETSPPIQNEPPNPPDQNESFDANIGQLRETGRLFVRNL 345
Query: 307 PYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
Y A+E ++ FS FG + E+H+ D +SKG AYV YA PE+
Sbjct: 346 LYNASESDMEPLFSPFGKIDEIHVAFDTRHSKSKGFAYVQYANPEA 391
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R+ FS G++ ++ + D +R FAF F + +EAE A+
Sbjct: 676 TKILIKNLPFQATKKDIRNLFSAYGKLRSVRVPQKFDRTARGFAFADFISAREAENAMDA 735
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ E A
Sbjct: 736 LKNTHLLGRRLVLEFA 751
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E+ R+FV LP T + DELR+HFS V++ H++ + I +V + P A A
Sbjct: 3 ENTRVFVSGLPPTFSNDELRKHFSTRYQVTDAHVIP------KRRIGFVGFKTPTEAQDA 56
Query: 357 IEVLDNSIFQGRLLHVMPAR 376
+ + + + + V AR
Sbjct: 57 VNYFNKTYIRMSKIAVEMAR 76
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ ++ ++NLP+ AT+ ++R FS +G + V V K + ++G A+ + A
Sbjct: 672 AMRGTKILIKNLPFQATKKDIRNLFSAYGKLRSVR-VPQKFDRTARGFAFADFISAREAE 730
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHN 388
A++ L N+ GR L + A + ++E+ N
Sbjct: 731 NAMDALKNTHLLGRRLVLEFASSEAIDPEKEIQN 764
>gi|256092948|ref|XP_002582139.1| rna binding motif protein [Schistosoma mansoni]
gi|353228818|emb|CCD74989.1| putative rna binding motif protein [Schistosoma mansoni]
Length = 692
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 170/339 (50%), Gaps = 54/339 (15%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+LE+GRLFVRNL Y TE L + FS G++S++H+ + ++ SKG A++ + P A
Sbjct: 104 ILETGRLFVRNLSYACTEQHLEKLFSVHGSLSDIHLAFEPWSQVSKGFAFITFLFPSDAV 163
Query: 355 RAIEVLDNSIFQGRLLHVMPARHK---KSSDKQELHN-----STSQGTKTLKQRREEER- 405
+A + LD + F RL+H++P + K S ++ L+N ++ +K L + +R
Sbjct: 164 KAYKSLDKTKFMNRLIHILPGQENIEPKDSFRKPLNNVYRNENSGDPSKILLSSFQNDRF 223
Query: 406 -KASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN-DLAVRIALGETQVIA 463
+ + SG WN+LF+RPD V +A K G++ +LD N +AVR+A GETQ++A
Sbjct: 224 QELKKDSGVGHNWNALFIRPDAVATYLAAKFGLTMEQVLDPSGNKSVAVRLAHGETQLVA 283
Query: 464 ETKKALTNAGVNVSSLEEF------------------SAGKTDGL---------KRSNHV 496
E + GV + + E+ ++G+ + L + S
Sbjct: 284 EMRGFFKTHGVRLEAFEKHNDETEIKEKDDNSVVVHETSGQRNRLESKSRSTIRQLSGTA 343
Query: 497 FLVKNLPYDSSEGELAKMFGKF---------------GSLDKVILPSTKTLALVVFLEPV 541
FL+KNLP ++E E+ + ++ L +V++P A+V +
Sbjct: 344 FLIKNLPAGTTEFEVRDLLKRYTKSSVTVDVNTPSIRSGLKRVLVPPLGITAIVEYAHSQ 403
Query: 542 EAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQ 580
+A +K LAY+ ++ L+L+W P L +SST N+
Sbjct: 404 QARLMYKALAYEPFRDSVLFLQWLPDGAL-KSSTPDDNE 441
>gi|170048414|ref|XP_001852656.1| multiple RNA-binding domain-containing protein 1 [Culex
quinquefasciatus]
gi|167870541|gb|EDS33924.1| multiple RNA-binding domain-containing protein 1 [Culex
quinquefasciatus]
Length = 537
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 142/241 (58%), Gaps = 17/241 (7%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+ ++E+G+LF RNL Y+ E +L++ F K+G VSE+ + +D +T++ KG V + +PE
Sbjct: 297 ESIVETGKLFFRNLAYSVQEQDLKQLFEKYGPVSEIDLPIDANTRKLKGFGTVTFLMPEH 356
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR--HKKSSDKQELHNSTSQGTKTLKQRREEERKASEA 410
A L+ + F GR+ H++PA+ K+ ++ E G +++ ++ +K +++
Sbjct: 357 AVLTYNELNGTFFHGRMFHLLPAKVDEKERAEADE----DDSGLTFKQKKEKQLKKTAQS 412
Query: 411 SGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA--NDLAVRIALGETQVIAETKKA 468
S N WN+LFM + + E +A+K+G +K ++L E AVR+ALGET+++ E +K
Sbjct: 413 SHN---WNTLFMGENAIAEAVAKKYGKTKEEVLSSEGGTTSAAVRLALGETEIVMEMQKF 469
Query: 469 LTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS 528
L AG+ + + + RSN V L KNLP + EL++ FGKFG L +VILP
Sbjct: 470 LEEAGIQLDAFNGVAKS------RSNAVILAKNLPAGTEPAELSERFGKFGLLGRVILPP 523
Query: 529 T 529
+
Sbjct: 524 S 524
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 84/149 (56%), Gaps = 3/149 (2%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VKNLP TE +LRD FS+ G +TD +L T +GK R F F+G+ +E++A +AI++
Sbjct: 2 SRIIVKNLPNGFTESKLRDHFSRCGIVTDVQLKYTPEGKFRNFGFVGYESEEQAAKAIQH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FN ++L T ++S + + + WS+YS K E+ E K + T E
Sbjct: 62 FNNTFLRTSKLSVAPCVALNEVKELKSWSKYSKKPEESKPAKESGKDKKKKTEQAPTSED 121
Query: 121 VTEN--DDPQLLEFLQVMQPRVKSKMWAN 147
+ + +DPQ EF+QV Q + +W N
Sbjct: 122 ILKQRKNDPQFKEFVQV-QNKAGKSVWDN 149
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ V+NLP TE +LR+HFS+ G V++V + + K + +V Y E A++AI+
Sbjct: 3 RIIVKNLPNGFTESKLRDHFSRCGIVTDVQLKYTPEGK-FRNFGFVGYESEEQAAKAIQH 61
Query: 360 LDNSIFQGRLLHVMPA 375
+N+ + L V P
Sbjct: 62 FNNTFLRTSKLSVAPC 77
>gi|71028784|ref|XP_764035.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350989|gb|EAN31752.1| hypothetical protein, conserved [Theileria parva]
Length = 727
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 225/484 (46%), Gaps = 64/484 (13%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVV------------DKDTKRSKGIA 343
++ R+ + NLPY TE+ +R+ +G V ++HI + D +T ++G+
Sbjct: 194 IDMNRVVIFNLPYNVTEEMIRKLVKPYGKVEQIHIPLTKRNITEITSGNDIETFLTRGMC 253
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREE 403
+V + A IE +N+IF GR++ V A+ +KS+D +K K + +
Sbjct: 254 FVTFTFESDALEFIEQKNNTIFSGRIITVSHAKTEKSNDLANKFLQKYDKSKKYKNKSVD 313
Query: 404 ERKASEASG--------NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIA 455
E SE N WN L + ++ +++IA+ ++ D+L E V A
Sbjct: 314 ETSYSEFKAKKRKSEIENRTIWNILHLDINSAIKSIAKNLNITSEDILRGEQ--AGVNAA 371
Query: 456 LGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMF 515
+ E+ ++ + KK L++ G+N S + ++ D + L+KNLP+D+ + +L ++F
Sbjct: 372 ISESFILNKVKKWLSDQGIN-SEVTDYKEDLYD------DILLIKNLPHDTEDRDLIRLF 424
Query: 516 GKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
G + + K L LV F E AF+ L+Y+ ++G+PLYL+ P +L +T
Sbjct: 425 SSCGKITRFTTSPFKLLGLVQFSSKSECDKAFRTLSYRMFQGLPLYLQKVPKSLLPNVNT 484
Query: 576 SKGNQKNDAVVGEHDAKRALLE-QQLEGVTDADIDPD----------------------R 612
++D + + +R +E ++ D +DPD R
Sbjct: 485 V----QSDGIEIDSGPQRDGVESNEVVDKVDDTLDPDDTVDADEVDQNGTAEEPERAVER 540
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKH-LKNGKNVSMGFGFIEFDS 671
+ S++V N++ +E +HF +G ++S +K H K + S +GFIEFDS
Sbjct: 541 IGHVSVYVSNIDESVSEEEFSRHFSGL--KGFVISKIIKPHGTKLEEKSSARYGFIEFDS 598
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAKKD-EQVVKKAEKDKSSTK----LLVRNVAFE 726
+ A + GT++ + L+L K+ + KD T+ ++V+N+ F+
Sbjct: 599 INNAKEAIKRRIGTVIGTKIISLELSKNKQTISNYSSRKHKDPGPTEENDVIIVKNLPFQ 658
Query: 727 AQRK 730
A +K
Sbjct: 659 ATKK 662
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 50/92 (54%), Gaps = 14/92 (15%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGE-----ITDAKLMRTKDGK--------SRQFAFIG 47
SR+ +KN+P + L ++K + +D +L+ TK+ K S+ ++G
Sbjct: 10 SRLIIKNIPNSLDNKSLEKLVTKKCKDLGVTKSDIRLL-TKEKKVNNEVKRVSKGICYVG 68
Query: 48 FRTEQEAEEAIKYFNKSYLDTCRISCEIARKV 79
F +E +A + + ++N +Y ++C++S E ++ +
Sbjct: 69 FISESDATKFLNHYNNTYFNSCKVSIEYSKII 100
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E+ + V+NLP+ AT+ EL E F + NV V I +G +V++ A A
Sbjct: 646 ENDVIIVKNLPFQATKKELLELFKYYSNVKTVRIPKSAGNTH-RGFGFVVFMSKNDAKLA 704
Query: 357 IEVLDNSIFQGRLL 370
+E L N GR L
Sbjct: 705 MENLKNVHLYGRRL 718
>gi|154280340|ref|XP_001540983.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412926|gb|EDN08313.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 675
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 168/319 (52%), Gaps = 33/319 (10%)
Query: 425 DTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSA 484
D V+ +++ + GVSKS+LLD ++D A+R A ET VI ETK ++ GVN+ S ++
Sbjct: 266 DAVISSVSERLGVSKSELLDPTSSDAAIRQAHAETHVIQETKAYFSSNGVNLDSFKQ--- 322
Query: 485 GKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAA 544
+R N LVKN + +L K+F FG + ++++P + T+A+V F+ E
Sbjct: 323 -----RERGNTAILVKNFSFGVKADDLRKLFEPFGQIKRLLIPPSGTIAIVEFVMADECQ 377
Query: 545 AAFKGLAYKRYKGVPLYLEWAPSDVLSQSST-SKGNQKNDAVVGE----HDAKRALLEQQ 599
AFKGLAY++ L+LE AP D+ + +T ++ VV + D +A ++
Sbjct: 378 KAFKGLAYRKLGDSILFLERAPKDLFDEKATAARVVAPPPKVVSQTFSTSDTFKATETEE 437
Query: 600 LEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KN 656
E +E+ +LFV+NLNF T + L + F +G LS +VK +
Sbjct: 438 AETP---------LETSTLFVRNLNFSTTNARLTEVF--QPLDG-FLSARVKTKADPKRP 485
Query: 657 GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS-- 714
G+ +SMGFGF+EF + A +QG LD H L+++ H D ++ E +
Sbjct: 486 GETLSMGFGFVEFRTAAQARAALATMQGYKLDQHELVVKTSHKAMDAAEERRREDNAKKL 545
Query: 715 ---STKLLVRNVAFEAQRK 730
TK+L++N+ F+A +K
Sbjct: 546 AMRGTKILIKNLPFQATKK 564
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 179/412 (43%), Gaps = 99/412 (24%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D LR FS + ++TDA ++ R+ F+GF+T EA++A+KY
Sbjct: 5 TRVFVSGLPPTFSNDELRKRFSTRYQVTDAHVI-----PKRRIGFVGFKTPTEAQDAVKY 59
Query: 61 FNKSYLDTCRISCEIARKV---GDPNMPRPWSRYSLKKEKEVSEDEK-NPVLAAKRG--- 113
FNK+Y+ +I+ E+AR DP + LK + + EK NP A
Sbjct: 60 FNKTYIRMSKIAVEMARPPALKADPTEGFYEADRILKVDADPPVVEKANPRHATSTNFTT 119
Query: 114 EKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
K+ ++V ++ DP+L E+L M+P ++SK WA+D G++ + + ++++ G
Sbjct: 120 LKRKHDQVEQSLDPKLQEYLATMKPTMRSKTWADD---GILINTNGESTDSVQVVSSGNT 176
Query: 174 KSITLHVKSDKS---------------NVITDSQATEKSKN----------AAADELMSD 208
++ ++ K K ++ D+ +KS++ + + SD
Sbjct: 177 ETPSIKAKRLKPGHEPTLKTKQTERPDDITEDNSVGKKSRSFETEDEPEATSVEEAPKSD 236
Query: 209 MDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSG 268
MD+ +SR + + DD+D+G E E D++I S+
Sbjct: 237 MDWLRSRTSRLLGLVQ---------DDEDEGSPE-----------TTEADAVI-SSVSER 275
Query: 269 VGEEDANGEIVDPGNPSSSSKDVQQEV----------------LESGR--------LFVR 304
+G + E++DP + ++ + E L+S + + V+
Sbjct: 276 LGV--SKSELLDPTSSDAAIRQAHAETHVIQETKAYFSSNGVNLDSFKQRERGNTAILVK 333
Query: 305 NLPYTATEDELREHFSKFGNVSEV------------HIVVDKDTKRSKGIAY 344
N + D+LR+ F FG + + ++ D+ K KG+AY
Sbjct: 334 NFSFGVKADDLRKLFEPFGQIKRLLIPPSGTIAIVEFVMADECQKAFKGLAY 385
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R+ FS G++ ++ + D +R FAF F + +EAE A+
Sbjct: 550 TKILIKNLPFQATKKDIRNLFSAYGKLRSVRVPQKFDRTARGFAFADFISAREAENAMDA 609
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ E A
Sbjct: 610 LKNTHLLGRRLVLEFA 625
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ ++ ++NLP+ AT+ ++R FS +G + V V K + ++G A+ + A
Sbjct: 547 MRGTKILIKNLPFQATKKDIRNLFSAYGKLRSVR-VPQKFDRTARGFAFADFISAREAEN 605
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHN 388
A++ L N+ GR L + A + ++E+ N
Sbjct: 606 AMDALKNTHLLGRRLVLEFASSEAIDPEKEIQN 638
>gi|307111066|gb|EFN59301.1| hypothetical protein CHLNCDRAFT_19359, partial [Chlorella
variabilis]
Length = 176
Score = 151 bits (381), Expect = 1e-33, Method: Composition-based stats.
Identities = 79/152 (51%), Positives = 100/152 (65%), Gaps = 4/152 (2%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRICVKNLPKYV + RLRD F+ KGE+TDAK+MRT+DGKSR F F+GFRT EAE A++Y
Sbjct: 27 SRICVKNLPKYVDDRRLRDQFAAKGEVTDAKVMRTRDGKSRCFGFVGFRTPAEAEAAVRY 86
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS--LKKEKEVSEDEKNPVLAAKRGEKKTI 118
FNKS++DT R++ E A K G PR WS+Y+ K ++ + GE
Sbjct: 87 FNKSFMDTMRLAVEFAYKFGSGEAPRAWSKYTEGTSAHKRLTAPPQTGANDVPLGEGA-- 144
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWANDTL 150
+ + DP+L EFLQVMQPR K +W ND L
Sbjct: 145 KGKAKQPDPKLREFLQVMQPRSKQAIWTNDDL 176
>gi|342182689|emb|CCC92168.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 861
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 188/369 (50%), Gaps = 29/369 (7%)
Query: 283 NPSSSSKDVQQEVL-ESGRLFVRNLPYTATEDELREHFSK-FGNVSEVHIVVDKDTKRSK 340
NP + + Q+E+ ES R+ + N+P+ A+E+++++ S G V VHI + +DT++SK
Sbjct: 297 NPPTDGGENQEEIARESHRVRIGNIPFIASEEDVKQFASSHVGPVEAVHIPLTRDTRQSK 356
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
G A+V + + A RA+ + +IF GRLL V A K + G KQ+
Sbjct: 357 GAAFVKFVRGDDAVRALSLCRGAIFMGRLLRVSAAVEDPYGKKSSGLTTARAGDSEFKQK 416
Query: 401 --REEERKASEASGNTK-AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALG 457
R R+ + SG AW+S +M T VE +A++ GV+ + ++ EA AVR A+
Sbjct: 417 KARARCREGEDPSGAAPLAWSSTYMSSHTAVETVAKRLGVASNAVVSVEARGAAVRAAIA 476
Query: 458 ETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLK-RSNHVFLVKNLPYDSSE--GELAKM 514
E + +E K+ L + ++ LE + + + LK RSN LVKN+ SE +L+KM
Sbjct: 477 EAYLTSEIKEVLGDEDIDFGLLE---SARDNLLKARSNTTILVKNITLADSEDAAQLSKM 533
Query: 515 FGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ-- 572
F ++G+L+ PS AL ++ +A AF+ L+YK +K VPL+LEWAP +S
Sbjct: 534 FLRYGTLEATAFPSVGAFALFRYVHQQDARVAFQRLSYKPFKNVPLFLEWAPIGSISTKE 593
Query: 573 -----SSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKT 627
T GN K V DAK +G D RV +LF+ N+ F +
Sbjct: 594 DRGACGETGDGNTKE--CVRSADAKD-------DGENDGIAAVTRV--FTLFITNIPFCS 642
Query: 628 CDENLRKHF 636
E+ +
Sbjct: 643 TKEDFNTYL 651
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRT-------KDGKSRQFAFIGFRTEQEA 54
++ VKN+P TE +RD FS E+ +L R ++ R FAF+ F TE+EA
Sbjct: 775 KLVVKNVPFEATERDIRDLFSAVSEVRSVRLPRKNNQFSSHRENNHRGFAFVEFLTEEEA 834
Query: 55 EEAIKYFNKSYL 66
A + ++L
Sbjct: 835 RRAKQTLGSTHL 846
>gi|68075777|ref|XP_679808.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56500633|emb|CAH98045.1| conserved hypothetical protein [Plasmodium berghei]
Length = 997
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 197/429 (45%), Gaps = 55/429 (12%)
Query: 331 VVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS------DKQ 384
+ + D K A+V + P S +A L+ +I++G++L V AR K + +K
Sbjct: 423 ITNIDLTNVKTYAFVSFVFPSSCEKAKNNLNETIYRGKILSVKYAREKIDNSEHLEKNKN 482
Query: 385 ELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD 444
+ S +KT ++ E +K N WN L+ ++ + N ++ +L+
Sbjct: 483 NIFIKLSNESKTSYKKILEIQKKRNCQ-NESIWNILYTDINSNIYNFCKETNCDPQSILN 541
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEF--------------SAGKTDGL 490
++AV ++L ET +I + K+ + G+ + + E+ K
Sbjct: 542 IRDKNIAVNVSLTETFIINKMKEWIRKEGIALEAFEQIYKKENSKPENDENDETDKVIKY 601
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGL 550
KRS+ +VKNL ++E ++ +F K G L K+ K +A++ + +P A A
Sbjct: 602 KRSDDTIIVKNLSMHTNENDIINLFKKHGILKKISFSPYKNIAILQYEQPENAKKALISN 661
Query: 551 AYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDP 610
+Y RYK +PLYLEWAP ++ Q+S + + + E++ + Q D++
Sbjct: 662 SYIRYKKLPLYLEWAPINLFEQNS-----KNTEGTIEENENSNDISYQNNAKPYDSESSD 716
Query: 611 DRVESRSLFVKNLNFKTCDENLRKHFGEH--------IKEGRILSVKVKKHLKNGKN--- 659
+ + S+++KN+NF T +E+ +K F + +K +++ K K + K+ +N
Sbjct: 717 EEITHSSIYIKNINFNTKEEDFKKLFEKLDGFITCNIVKSKKVIKQKHKDNKKDKENDKN 776
Query: 660 ----------------VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH--AKK 701
+S+G+GF EF S E A + L T LDGH L L L H KK
Sbjct: 777 NDNEGTGDKTEEEHKYISLGYGFAEFKSKELAIEAIKKLTATRLDGHVLELSLSHNRIKK 836
Query: 702 DEQVVKKAE 710
++Q K E
Sbjct: 837 NKQAYKNNE 845
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 27/161 (16%)
Query: 1 SRICVKNLPKYVTE-DRLRDFFSQKGE----ITDAKLMRT-------KDGKSRQFAFIGF 48
+R+ +KN+PKY+ E D + FF KG+ ITD K+M+ + +SR+ FIGF
Sbjct: 41 TRVIIKNIPKYMNEIDLKKHFFKMKGKYDFKITDIKIMKRKKIIKNKESYESRKICFIGF 100
Query: 49 RTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVL 108
+ + E K FN +Y+ T +I E A P + + + + L E+ + EK
Sbjct: 101 ISNIDCENFKKSFNNTYIHTSKIIIEDA---FSPILSKNSNTFQL---NEIKQSEK---- 150
Query: 109 AAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDT 149
K+ ++ KV +ND +F+ M K+K N T
Sbjct: 151 TNKKDKQNNTVKVIKND-----QFINKMTTIKKTKAGMNTT 186
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 14/110 (12%)
Query: 501 NLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLAYKRY 555
NL + ++ EL K+F FG++ V +P ++ V F+ E AA L +
Sbjct: 864 NLAFQVTKEELKKLFSAFGNIKNVRIPKNAYNRSRGYGFVEFMSKNECLAAINALQHTHL 923
Query: 556 KGVPLYLEWAPSDVLSQS---------STSKGNQKNDAVVGEHDAKRALL 596
G L +++A + Q+ S + NQ+ V+ AKR ++
Sbjct: 924 YGRHLIIDFANDLIFDQNVDEFDKMKESQNNPNQQGKDVITSEQAKRKVI 973
>gi|82793820|ref|XP_728191.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23484422|gb|EAA19756.1| RNA recognition motif, putative [Plasmodium yoelii yoelii]
Length = 767
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 196/432 (45%), Gaps = 59/432 (13%)
Query: 331 VVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS------DKQ 384
+ + D K A+V + P S +A L+ +I++G++L V AR K + +K
Sbjct: 194 ITNIDLTNVKTYAFVSFVFPSSCEKAKNNLNETIYRGKVLSVKYAREKIDNSENLEKNKN 253
Query: 385 ELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD 444
+ S +KT ++ E +K N WN L+ ++ + N ++ +L+
Sbjct: 254 NIFIKLSNESKTSYKKILEIQKKRNCQ-NENIWNILYTDINSNIYNFCKETNCDPQSILN 312
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEF--------------SAGKTDGL 490
++AV ++L ET +I + K+ + G+ + + E+ K
Sbjct: 313 IRDKNIAVNVSLTETFIINKMKEWIRKEGIALEAFEQIYKKENAKPENDENDETDKVVKY 372
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGL 550
KRS+ +VKNL ++E ++ +F K G L K+ K +A++ + +P +A A
Sbjct: 373 KRSDDTIIVKNLSMHTNENDIINLFKKHGILKKISFSPYKNIAILQYEKPEDAKKALISN 432
Query: 551 AYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDP 610
+Y RYK +PLYLEWAP ++ Q+ N+ + E++ Q D++
Sbjct: 433 SYIRYKKLPLYLEWAPVNLFEQN-----NKNTEGTTEENENYNDTSHQNNAEPYDSESSD 487
Query: 611 DRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS--VKVKKHLK------------- 655
+ + S+++KN+NF T +E+ +K F + +G I VK KK +K
Sbjct: 488 EEITHSSIYIKNINFNTKEEDFKKLFEKL--DGFITCNIVKSKKAIKQKHKDNKQDKEND 545
Query: 656 -------NG-------KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH--A 699
NG K +S+G+GF EF S E A + L T LDGH L L L H
Sbjct: 546 KNNDSGGNGDKTEEENKYISLGYGFAEFKSKELAIEAIKKLTATKLDGHVLELSLSHNRI 605
Query: 700 KKDEQVVKKAEK 711
KK++Q EK
Sbjct: 606 KKNKQAYNNEEK 617
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
Query: 501 NLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLAYKRY 555
NL + ++ EL K+F FG++ V +P ++ V F+ E AA L +
Sbjct: 634 NLAFQVTKEELKKLFSAFGNIKNVRIPKNAYNRSRGYGFVEFMSKNECLAAINALQHTHL 693
Query: 556 KGVPLYLEWAPSDVLSQS---------STSKGNQKNDAVVGEHDAKRALL 596
G L +++A + Q+ S + GNQ+ V+ AKR ++
Sbjct: 694 YGRHLIIDFANDLIFDQNVDEFDKMKESQNNGNQQGKGVITSEQAKRKVI 743
Score = 39.3 bits (90), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 305 NLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSI 364
NL + T++EL++ FS FGN+ V I + RS+G +V + AI L ++
Sbjct: 634 NLAFQVTKEELKKLFSAFGNIKNVRIPKNA-YNRSRGYGFVEFMSKNECLAAINALQHTH 692
Query: 365 FQGRLLHV 372
GR L +
Sbjct: 693 LYGRHLII 700
>gi|240279857|gb|EER43362.1| multiple RNA-binding domain-containing protein [Ajellomyces
capsulatus H143]
gi|325092985|gb|EGC46295.1| multiple RNA-binding domain-containing protein [Ajellomyces
capsulatus H88]
Length = 801
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 166/315 (52%), Gaps = 25/315 (7%)
Query: 425 DTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSA 484
D V+ +++ + GVSKS+L+D ++D A+R A ET VI ETK ++ GVN+ S ++
Sbjct: 392 DAVMSSVSERLGVSKSELIDPTSSDAAIRQAHAETHVIQETKAYFSSNGVNLDSFKQ--- 448
Query: 485 GKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAA 544
+R N LVKN + ++ K+F FG + ++++P + T+A+V F+ E
Sbjct: 449 -----RERGNTAILVKNFSFGVKADDIRKLFEPFGQIKRLLMPPSGTIAIVEFVMADECQ 503
Query: 545 AAFKGLAYKRYKGVPLYLEWAPSDVLSQSST-SKGNQKNDAVVGEHDAKRALLEQQLEGV 603
AFKGLAY++ L+LE AP D+ + +T S+ VV + + +
Sbjct: 504 KAFKGLAYRKLGDSILFLERAPKDLFDEKATASRVIAPPPKVVSQTFSTSDTFKATETEE 563
Query: 604 TDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---KNGKNV 660
T+ +E+ +LFV+NLNF T + L + F +G LS +VK + G+ +
Sbjct: 564 TET-----PLETSTLFVRNLNFSTTNARLTEVF--QPLDG-FLSARVKTKADPKRPGETL 615
Query: 661 SMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS-----S 715
SMGFGF+EF + A +QG LD H L+++ H D ++ E +
Sbjct: 616 SMGFGFVEFRTAAQAHAALATMQGYKLDQHELVVKTSHKAMDAAEERRREDNAKKLAMRG 675
Query: 716 TKLLVRNVAFEAQRK 730
TK+L++N+ F+A +K
Sbjct: 676 TKILIKNLPFQATKK 690
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 185/405 (45%), Gaps = 71/405 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ V LP + D LR FS + ++TDA ++ R+ F+GF+T EA++A+ Y
Sbjct: 5 TRVFVSGLPPTFSNDELRKHFSTRYQVTDAHVI-----PKRRIGFVGFKTPTEAQDAVNY 59
Query: 61 FNKSYLDTCRISCEIARKVGD---------PNMPR-PWSRYSLKKEK--------EVSED 102
FNK+Y+ +I+ E+AR V P P ++ LK + + +
Sbjct: 60 FNKTYIRMSKIAVEMARPVCSFSLLLYSALPTFPLCDFTEPPLKADPTEGFYEADRIPKV 119
Query: 103 EKNPVLAAKRGE-----------KKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLI 151
+ +P + K K+ ++V ++ DP+L E+L M+P ++SK WA+D ++
Sbjct: 120 DADPPVVGKANPRHATSTDFTTLKRKHDQVEQSLDPKLQEYLATMKPTMRSKTWADDGIL 179
Query: 152 ----GLMADQKAKVSENISQ--AIK------GGEKSITLHVKSDKSNVITDSQATEKS-- 197
G D +S ++ +IK G E ++ +V D+ +KS
Sbjct: 180 VNANGESTDSAQVISSGNTETPSIKAKRLKPGHEPTLKTKQTERLDDVTEDNSVAKKSVS 239
Query: 198 --------KNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDH 249
+ + SDMD+ +SR + E DD+D+G E E +
Sbjct: 240 FETEDEPEATSVEEAPKSDMDWLRSRTSRLLGLVE---------DDEDEGSPETTEIQE- 289
Query: 250 NGDSNEECDSIIKDSIHSGVGEEDA--NGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLP 307
E DS I+++ E E DP + + S ++ E+GRLFVRNL
Sbjct: 290 ---IEESYDSDIENARKRKAQETSPPIQNEPPDPPDQNESFDANIGQLRETGRLFVRNLL 346
Query: 308 YTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
Y A+E ++ FS FG + E+H+ D +SKG AYV YA PE+
Sbjct: 347 YNASESDMEPLFSPFGKIDEIHVAFDTRHSKSKGFAYVQYANPEA 391
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R+ FS G++ ++ + D +R FAF F + +EAE A+
Sbjct: 676 TKILIKNLPFQATKKDIRNLFSAYGKLRSVRVPQKFDRTARGFAFADFISAREAENAMDA 735
Query: 61 FNKSYLDTCRISCEIA 76
++L R+ E A
Sbjct: 736 LKNTHLLGRRLVLEFA 751
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E+ R+FV LP T + DELR+HFS V++ H++ + I +V + P A A
Sbjct: 3 ENTRVFVSGLPPTFSNDELRKHFSTRYQVTDAHVIP------KRRIGFVGFKTPTEAQDA 56
Query: 357 IEVLDNSIFQGRLLHVMPAR 376
+ + + + + V AR
Sbjct: 57 VNYFNKTYIRMSKIAVEMAR 76
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ ++ ++NLP+ AT+ ++R FS +G + V V K + ++G A+ + A
Sbjct: 673 MRGTKILIKNLPFQATKKDIRNLFSAYGKLRSVR-VPQKFDRTARGFAFADFISAREAEN 731
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHN 388
A++ L N+ GR L + A + ++E+ N
Sbjct: 732 AMDALKNTHLLGRRLVLEFASSEAIDPEKEIQN 764
>gi|146079207|ref|XP_001463723.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134067810|emb|CAM66090.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 954
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 173/370 (46%), Gaps = 50/370 (13%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKF-GNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
S R+ + N+PY ATE+ L++ + G V VHI + KDT+++KG A+V ++ E A RA
Sbjct: 370 SHRIRLGNIPYIATEEHLKQFAASLVGPVEAVHIPLTKDTRQNKGAAFVRFSSAEDAVRA 429
Query: 357 IEVLDNSIFQGRLLHVMPAR---HKKSSDKQE---------------LHNSTSQGTKTLK 398
+++ +I GRLL V A H K ++E L G+ K
Sbjct: 430 LQLCRGAILMGRLLRVSAAEEDPHSKRVMEREAALASTAAAQAADGALSRMNLAGSSQFK 489
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGE 458
++RE +R+ G WN+++M VE +A++ GV D++ A AVR A+ E
Sbjct: 490 KQREADRRDKGGGGGQMTWNTMYMNSHAAVETVAQRLGVRSEDVVGVGAKGAAVRAAIAE 549
Query: 459 TQVIAETKKALTNAGVNVSSLEEFSAGKTDGL--KRSNHVFLVKNLPY--DSSEGELAKM 514
+ +E ++ L++ G+ LE G T RSN LVKNL + EL K+
Sbjct: 550 AYLTSEVQQVLSDEGIAFDLLE----GATQNFLKSRSNTTILVKNLQLKDGNDAAELTKL 605
Query: 515 FGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
F +FG L+ PS AL + P +A AF L+YK +K PL+LEWAP L + S
Sbjct: 606 FVRFGVLEASAFPSAGMFALFRYTHPQDARIAFTRLSYKLFKTAPLFLEWAPVGALMEDS 665
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPD------------RVESRSLFVKN 622
G A + L AD DPD + +LF+ N
Sbjct: 666 E-----------GGSAPAVAASDLGLTAGPSADGDPDADTGGSVAAAVAKAMVYTLFLTN 714
Query: 623 LNFKTCDENL 632
+ F+T ++ L
Sbjct: 715 IPFQTTEDEL 724
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS------KGIAYVLYAIPESA 353
+L V+NLP+ ATE ++RE FS F + V + T S +G A+V + A
Sbjct: 869 KLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHTFSSHRENNHRGFAFVEFLSEAEA 928
Query: 354 SRAIEVLDNSIFQGRLL 370
+RA+E L + GR L
Sbjct: 929 ARALETLKATHLYGRHL 945
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 35/114 (30%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-------EITDAKLMRT-----------KDGKSRQ 42
SR+ + NLP TE++L+ + EITD + +R K K RQ
Sbjct: 2 SRVRILNLPNDCTEEQLKQHLLRTAPREAPLLEITDVQFIRRPATAADRDHHHKHQKQRQ 61
Query: 43 -----------------FAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKV 79
AF+GFRT ++YFN S+ + R+ E+A+ +
Sbjct: 62 GSGGAVAAAKAPKMILRMAFVGFRTSAAGHFVVQYFNSSFFRSSRLKVELAKGL 115
Score = 42.4 bits (98), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 610 PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL--KNGKNVSMGFGFI 667
P + + L VKNL F+ ++++R+ F E R + V K H + +N GF F+
Sbjct: 862 PPGSDPQKLIVKNLPFEATEKDVRELFSA-FSEIRTVRVPRKSHTFSSHRENNHRGFAFV 920
Query: 668 EFDSVETATNVCRDLQGTILDGHALILQ 695
EF S A L+ T L G L+LQ
Sbjct: 921 EFLSEAEAARALETLKATHLYGRHLVLQ 948
>gi|398011431|ref|XP_003858911.1| hypothetical protein, conserved [Leishmania donovani]
gi|322497122|emb|CBZ32193.1| hypothetical protein, conserved [Leishmania donovani]
Length = 952
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 173/370 (46%), Gaps = 50/370 (13%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKF-GNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
S R+ + N+PY ATE+ L++ + G V VHI + KDT+++KG A+V ++ E A RA
Sbjct: 368 SHRIRLGNIPYIATEEHLKQFAASLVGPVEAVHIPLTKDTRQNKGAAFVRFSSAEDAVRA 427
Query: 357 IEVLDNSIFQGRLLHVMPAR---HKKSSDKQE---------------LHNSTSQGTKTLK 398
+++ +I GRLL V A H K ++E L G+ K
Sbjct: 428 LQLCRGAILMGRLLRVSAAEEDPHSKRVMEREAALASTAAAQAADGALSRMNLAGSSQFK 487
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGE 458
++RE +R+ G WN+++M VE +A++ GV D++ A AVR A+ E
Sbjct: 488 KQREADRRDKGGGGGQMTWNTMYMNSHAAVETVAQRLGVRSEDVVGVGAKGAAVRAAIAE 547
Query: 459 TQVIAETKKALTNAGVNVSSLEEFSAGKTDGL--KRSNHVFLVKNLPY--DSSEGELAKM 514
+ +E ++ L++ G+ LE G T RSN LVKNL + EL K+
Sbjct: 548 AYLTSEVQQVLSDEGIAFDLLE----GATQNFLKSRSNTTILVKNLQLKDGNDAAELTKL 603
Query: 515 FGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
F +FG L+ PS AL + P +A AF L+YK +K PL+LEWAP L + S
Sbjct: 604 FVRFGVLEASAFPSAGMFALFRYTHPQDARIAFTRLSYKLFKTAPLFLEWAPVGALMEDS 663
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPD------------RVESRSLFVKN 622
G A + L AD DPD + +LF+ N
Sbjct: 664 E-----------GGSAPAVAASDLGLTAGPSADGDPDADTGGSVAAAVAKAMVYTLFLTN 712
Query: 623 LNFKTCDENL 632
+ F+T ++ L
Sbjct: 713 IPFQTTEDEL 722
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS------KGIAYVLYAIPESA 353
+L V+NLP+ ATE ++RE FS F + V + T S +G A+V + A
Sbjct: 867 KLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHTFSSHRENNHRGFAFVEFLSEAEA 926
Query: 354 SRAIEVLDNSIFQGRLL 370
+RA+E L + GR L
Sbjct: 927 ARALETLKATHLYGRHL 943
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 610 PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL--KNGKNVSMGFGFI 667
P + + L VKNL F+ ++++R+ F E R + V K H + +N GF F+
Sbjct: 860 PPGSDPQKLIVKNLPFEATEKDVRELFSA-FSEIRTVRVPRKSHTFSSHRENNHRGFAFV 918
Query: 668 EFDSVETATNVCRDLQGTILDGHALILQ 695
EF S A L+ T L G L+LQ
Sbjct: 919 EFLSEAEAARALETLKATHLYGRHLVLQ 946
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 35/114 (30%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-------EITDAKLMRT-----------KDGKSRQ 42
SR+ + NLP TE++L+ + EITD + +R K K RQ
Sbjct: 2 SRVRILNLPNDCTEEQLKQHLLRTAPREAPLLEITDVQFIRRPATAADRDHHHKHQKQRQ 61
Query: 43 -----------------FAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKV 79
AF+GFRT +YFN S+ + R+ E+A+ +
Sbjct: 62 GSGGAVAAARAPKMILRMAFVGFRTSAAGHFVAQYFNSSFFRSSRLKVELAKGL 115
>gi|253741484|gb|EES98353.1| Polyadenylate-binding protein, putative [Giardia intestinalis ATCC
50581]
Length = 597
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 224/488 (45%), Gaps = 63/488 (12%)
Query: 246 ENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRN 305
+N H+ D+ EE D+ + + + E+D E D G + DV+ +++ R+ +
Sbjct: 148 DNQHDSDAPEEVDAGGESRM---MPEDDQVAE--DYGQDLIDTNDVE---IDAVRIKLTG 199
Query: 306 LPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIF 365
L TED L +HFS +G +SE + +DK T + G+ +V + +PE+A RA + D +I
Sbjct: 200 LANVTTEDHLLKHFSPYGEISETVVCLDKLTHKPTGVGFVTFCLPEAAFRAKKQRD-TII 258
Query: 366 QGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPD 425
G+++ + PAR L +E N AWN +MR +
Sbjct: 259 NGKVVRITPAR-----------------AIILPGAHKEYLVKGLDKHNKLAWNPSYMRSN 301
Query: 426 TVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAG 485
TV IA + + ++ L AV +A+ E ++ E L G+ ++ A
Sbjct: 302 TVASVIAERLNLDQTALTSN-----AVGLAVAEAHLVEEATAILKTHGILIAD----EAI 352
Query: 486 KTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAA 545
+ +RS V L KNLP D E+++ F ++G++ + + P A+V P +A
Sbjct: 353 RATDAQRSKTVILCKNLPSDVDISEISQHFEQYGAVLRCVQPC-PGFAIVELGAPQDARK 411
Query: 546 AFKGLAYKRYK--GVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGV 603
AF LA+KR VP++LE+A + Q+ ++ ++ QQ
Sbjct: 412 AFNMLAFKRVGKLKVPMFLEFA----MMQNXINQAKDDDNHT------------QQRGSE 455
Query: 604 TDADIDPDRVES-RSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSM 662
+ + P R E+ ++++KN++F T + + E K S ++ H K
Sbjct: 456 SASTAPPARREAPTTVYIKNISFSTAPDRVYAIIKELPKNA---SCRLVLHAHGHK---- 508
Query: 663 GFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRN 722
G+GF EF + E+A + LDGH L D ++V+ + ++TKL+++N
Sbjct: 509 GYGFAEFLTKESAKEAIEKISNITLDGHKWSASLARG-NDGEIVQHTAEAGATTKLIIKN 567
Query: 723 VAFEAQRK 730
+AF+A K
Sbjct: 568 LAFQANGK 575
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 8/140 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNL K TE ++ F G ITD +L+ +DG SR+ A++GF E A++AI
Sbjct: 2 SRVFVKNLAKKATESDVQKHFQSIGTITDVRLLFKEDGTSRRVAYVGFLDEASADKAIAK 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKR-GEKKTIE 119
N SY+ T RIS E A +PR K ++E E + LA + G ++ I+
Sbjct: 62 LNHSYIRTSRISVEKA-------LPRSAIEAEQKLKEEDRERQHQERLAKHQGGARELID 114
Query: 120 KVTENDDPQLLEFLQVMQPR 139
++ + +L E++Q+ R
Sbjct: 115 QMRKEGGQKLQEYIQIAGQR 134
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+FV+NL ATE ++++HF G +++V ++ +D S+ +AYV + SA +AI
Sbjct: 3 RVFVKNLAKKATESDVQKHFQSIGTITDVRLLFKEDGT-SRRVAYVGFLDEASADKAIAK 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLK----QRREEERKASEASG 412
L++S R + S ++ L S + + LK +R+ +ER A G
Sbjct: 62 LNHSYI----------RTSRISVEKALPRSAIEAEQKLKEEDRERQHQERLAKHQGG 108
>gi|159112569|ref|XP_001706513.1| Polyadenylate-binding protein, putative [Giardia lamblia ATCC
50803]
gi|157434610|gb|EDO78839.1| Polyadenylate-binding protein, putative [Giardia lamblia ATCC
50803]
Length = 663
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 230/532 (43%), Gaps = 88/532 (16%)
Query: 210 DYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGV 269
+Y + ++ W D+ D D G + E GD+++ V
Sbjct: 126 EYIQIAGQRSWEDNVV---CVARDTDSQQGSTSDAPEEAGAGDNSQ-------------V 169
Query: 270 GEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVH 329
ED D G + D++ +++ R+ + L TED L +HFS +G +SE
Sbjct: 170 KTEDGQAATEDYGQDLIDTNDIE---IDAVRIKLTGLANVTTEDHLLQHFSSYGEISEAV 226
Query: 330 IVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARH--KKSSDKQELH 387
+ +DK T + G+ +V + +PE+A RA + D +I G+++ + PAR S K+ L
Sbjct: 227 VCLDKLTHKPTGVGFVTFCLPEAAFRAKKQRD-TIINGKVVRITPARAIILPGSHKEYL- 284
Query: 388 NSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA 447
K L + N AWN +MR +TV A + + ++ L
Sbjct: 285 ------VKGLDKH------------NKLAWNPSYMRSNTVASVAAERLNLDQTALASN-- 324
Query: 448 NDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSS 507
AV +A+ E ++ E L G+ + A + +RS V L KNLP D
Sbjct: 325 ---AVGLAVAEAHLVEEATAILKTHGILIVD----EAVRATDTQRSKTVILCKNLPGDVD 377
Query: 508 EGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYK--GVPLYLEWA 565
E+++ F ++G++ + I P A+V P +A AF LA+KR VP++LE+A
Sbjct: 378 ISEISQQFEQYGAVLRCIQPC-PGFAIVEMGAPQDARKAFNMLAFKRVGKLKVPMFLEFA 436
Query: 566 PSDVLSQSST-------SKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSL 618
+ Q++ S+ QKN Q EG + A + P R ++
Sbjct: 437 ----MMQNTVDQIKDDGSQTQQKN---------------QDCEGTSTAPL-PKREAPTTI 476
Query: 619 FVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNV 678
++KN++F T + + + K S ++ H K G+GF EF + A
Sbjct: 477 YIKNISFSTTPDRVYAIIKDLPKNA---SCRLVLHAHGHK----GYGFAEFLTKAAAQEA 529
Query: 679 CRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
+ LDGH L D ++ + A + ++TKL+++N+AF+A K
Sbjct: 530 IDKISNITLDGHKWSASLARG-NDGEIAQHAAEAGATTKLIIKNLAFQANGK 580
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 77/144 (53%), Gaps = 16/144 (11%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNL K TE ++ F G IT+ +L+ +DG SR+ A++GF E A +AI
Sbjct: 2 SRVFVKNLAKKATESDIQKHFQSIGPITEIRLLLKEDGTSRRVAYVGFLDEASANKAIAK 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEK-----NPVLAAKRGEK 115
N SY+ T RIS E + SR +++ E+++ E+++ + + G +
Sbjct: 62 LNHSYIRTSRISVE-----------KALSRSAIEAEQKLREEDRERRHQERLAKHQGGAR 110
Query: 116 KTIEKVTENDDPQLLEFLQVMQPR 139
+ IE++ + +L E++Q+ R
Sbjct: 111 ELIEQMRKEGGKKLQEYIQIAGQR 134
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+FV+NL ATE ++++HF G ++E+ +++ +D S+ +AYV + SA++AI
Sbjct: 3 RVFVKNLAKKATESDIQKHFQSIGPITEIRLLLKEDGT-SRRVAYVGFLDEASANKAIAK 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTL----KQRREEERKASEASG 412
L++S R + S ++ L S + + L ++RR +ER A G
Sbjct: 62 LNHSYI----------RTSRISVEKALSRSAIEAEQKLREEDRERRHQERLAKHQGG 108
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 290 DVQQEVLESG---RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
++ Q E+G +L ++NL + A EL++ S+FG V D R +G A+V
Sbjct: 554 EIAQHAAEAGATTKLIIKNLAFQANGKELKQLVSQFGRVVSFRAPKKLD-GRLRGFAFVQ 612
Query: 347 YAIPESASRAIEVLDNSIFQGRLLHVMP 374
YA + A A+ + + F GR H++P
Sbjct: 613 YATEKEAEVALNRIKLTHFYGR--HLVP 638
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+++ +KNL L+ SQ G + + + DG+ R FAF+ + TE+EAE A+
Sbjct: 566 TKLIIKNLAFQANGKELKQLVSQFGRVVSFRAPKKLDGRLRGFAFVQYATEKEAEVAL 623
>gi|303277453|ref|XP_003058020.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460677|gb|EEH57971.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 930
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 134/251 (53%), Gaps = 35/251 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+CVKN+PK++T DRLR+ F+++GE+TD K+++T DGKSR AF+GF+TE +A +A++Y
Sbjct: 36 SRLCVKNIPKHLTRDRLREHFAERGEVTDVKILKTSDGKSRCMAFVGFKTEADATKALEY 95
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS-----LKKEKEVSEDEKNPVLA------ 109
F+ +++DT +I+ E AR + +PRPWSR+S K + D K P A
Sbjct: 96 FDNTFVDTSKIAVEYARAMKSSALPRPWSRHSEGSSAHAKATKPKPDAKAPPEADPDRFI 155
Query: 110 -------AKRGEKKTIEKVTEN---DDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKA 159
K+ +++ E + +DP+L EF+++M PR K K+W N G+ D
Sbjct: 156 GVRELKKMKKAKQREYEAELDRQIAEDPKLAEFMRLMMPRSKQKLWDNQD-AGMHLDSAV 214
Query: 160 KVSENISQAI--KGGEKSITLHVKSDKSNVITDSQATEKSKNA-----------AADELM 206
E+ A GGE +S ++ + + AAD+ +
Sbjct: 215 VAGEDDGGAGFEDGGESDDDYQDVESESESESEEDDDDDDLSGEEDEDAEVDAIAADDAV 274
Query: 207 SDMDYFKSRVK 217
SDMDY K R K
Sbjct: 275 SDMDYLKKRAK 285
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S RL V+N+P T D LREHF++ G V++V I+ D K S+ +A+V + A++A+
Sbjct: 35 SSRLCVKNIPKHLTRDRLREHFAERGEVTDVKILKTSDGK-SRCMAFVGFKTEADATKAL 93
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGT 394
E DN+ + V AR KSS + S+G+
Sbjct: 94 EYFDNTFVDTSKIAVEYARAMKSSALPRPWSRHSEGS 130
>gi|294883272|ref|XP_002770538.1| hypothetical protein Pmar_PMAR013164 [Perkinsus marinus ATCC 50983]
gi|239873961|gb|EER02695.1| hypothetical protein Pmar_PMAR013164 [Perkinsus marinus ATCC 50983]
Length = 182
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 117/187 (62%), Gaps = 12/187 (6%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+++ RL + NLPY ATED++++ F KFG++ +V ++ D+D+K+S+G+AYV Y PE A R
Sbjct: 1 MDTARLLLVNLPYIATEDDIKKAFQKFGSIEDVVVLRDEDSKKSRGMAYVTYLFPEHAVR 60
Query: 356 AIEVLDNSIFQGRLLHV--MPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
A + +FQGR+L + AR KK ++ E S Q + LK+RRE +
Sbjct: 61 AKAEMHGKVFQGRVLRIKAAQARPKKHVERDEKRLSRKQ--EQLKKRRE--------NAE 110
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAG 473
WN LF+ ++ V A K G+SK+D++D EA+DLAVR A+GET+V+ E K+ L G
Sbjct: 111 QHTWNLLFVSANSAVTAAASKLGLSKADVMDVEADDLAVRAAVGETEVVREVKQWLKEEG 170
Query: 474 VNVSSLE 480
V V + E
Sbjct: 171 VRVDAFE 177
>gi|414588314|tpg|DAA38885.1| TPA: hypothetical protein ZEAMMB73_593277 [Zea mays]
Length = 584
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/103 (66%), Positives = 87/103 (84%)
Query: 427 VVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGK 486
VVENIARK+G++KS+LLDREA+DLAVRIALGET VIAETKK L+ +GVNV +LEE ++ +
Sbjct: 474 VVENIARKNGINKSELLDREADDLAVRIALGETHVIAETKKFLSRSGVNVVALEEHASKR 533
Query: 487 TDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPST 529
+ KRSN+V LVKNLP++S+E ELA +F K SLDK+ILP T
Sbjct: 534 NEKFKRSNYVILVKNLPFNSTEEELATLFQKHDSLDKIILPPT 576
>gi|340503643|gb|EGR30188.1| rbd protein, putative [Ichthyophthirius multifiliis]
Length = 379
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 171/322 (53%), Gaps = 42/322 (13%)
Query: 417 WNSLFMRPDTVVENIARKHGVSKSDLLDREAN-DLAVRIALGETQVIAETKKAL-TNAGV 474
WN+LF+ P++++E I++++ + KSD+L +A LAVR+A E QVIAETK+ + G+
Sbjct: 28 WNTLFLNPNSILETISKRYDLKKSDILSPQAQGSLAVRVANAEAQVIAETKEWMEKQEGL 87
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLAL 534
+ L+ + +T+ +RS ++ LVKNLP+ E L+++F +FG + ++++ +++ +
Sbjct: 88 CLDFLD--NDRRTN--ERSKNIILVKNLPFKIQEDGLSELFERFGFVTRLLISPNRSIGI 143
Query: 535 VVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRA 594
V F A AF+ L+Y K PLYLEWAP +L K
Sbjct: 144 VQFESEEHAQNAFEKLSYFSLKNCPLYLEWAPIGLLKTEEVEK----------------- 186
Query: 595 LLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL 654
Q+++ D ++ +R +++KNL+F + L K F E G I +VK+ K
Sbjct: 187 --HQKIQEEIDDEL------ARVVYIKNLDFSVQETEL-KEFFEKQNLGEIKAVKIIK-- 235
Query: 655 KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS 714
KN N S G+GF+E+ + + LQ ++ G L L + K+ ++ K +K
Sbjct: 236 KN--NNSQGYGFVEYKNSSAVQECIKRLQNSLFQGRCLHLSVSKGKQQQEDNKGKQKKGK 293
Query: 715 ------STKLLVRNVAFEAQRK 730
S K+++RN+AFE +K
Sbjct: 294 NNNIPISNKIVIRNLAFETDKK 315
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 301 LFVRNLPYTATEDELREHFSK--FGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
++++NL ++ E EL+E F K G + V I+ K S+G +V Y + I+
Sbjct: 202 VYIKNLDFSVQETELKEFFEKQNLGEIKAVKII--KKNNNSQGYGFVEYKNSSAVQECIK 259
Query: 359 VLDNSIFQGRLLHVMPARHKKSSD 382
L NS+FQGR LH+ ++ K+ +
Sbjct: 260 RLQNSLFQGRCLHLSVSKGKQQQE 283
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++ +RNL + + E+RE FG V V + K + +G A+V + + A A
Sbjct: 300 SNKIVIRNLAFETDKKEVRELIKGFGEVKSVRL-PKKMNGQHRGFAFVEFTTTQEAKNAF 358
Query: 358 EVLDNSIFQGRLLHVMPAR 376
L+N+ F GR L + A+
Sbjct: 359 TALENTHFYGRKLVIEWAK 377
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I ++NL + +R+ GE+ +L + +G+ R FAF+ F T QEA+ A
Sbjct: 301 NKIVIRNLAFETDKKEVRELIKGFGEVKSVRLPKKMNGQHRGFAFVEFTTTQEAKNAFTA 360
Query: 61 FNKSYLDTCRISCEIAR 77
++ ++ E A+
Sbjct: 361 LENTHFYGRKLVIEWAK 377
>gi|164661195|ref|XP_001731720.1| hypothetical protein MGL_0988 [Malassezia globosa CBS 7966]
gi|159105621|gb|EDP44506.1| hypothetical protein MGL_0988 [Malassezia globosa CBS 7966]
Length = 824
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 133/233 (57%), Gaps = 21/233 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LP Y+++ RLR+ F+QKG++TD KLMR DG SR+F F+G+RTE EAE+A Y
Sbjct: 2 SRVIVKGLPPYLSDSRLREHFAQKGKVTDVKLMRRPDGTSRRFGFVGYRTEAEAEDARTY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
F+++Y+DT RIS +A+++GD ++ + + + K DEK+ AK +KK +
Sbjct: 62 FDRTYIDTSRISVALAKQIGDQDL---LAEKTARLSKSTKADEKD--QRAKSTQKK--DD 114
Query: 121 VTENDDPQ-------LLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQ--AIKG 171
TE P+ EF+ VM P++K K W N+ + +A +E I + +
Sbjct: 115 QTEKKAPKASEKGATFEEFMSVMAPKLKRKSWMNNDDL-----TRANEAEQIREEKPMTK 169
Query: 172 GEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSE 224
KS T ++D S +S NAA++E +SD++Y + R++ + E
Sbjct: 170 RRKSTTKPAQADPSLTARESDGETPKDNAASNEALSDLEYMRRRMRHKVAGGE 222
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 605 DADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGF 664
D D R S + VKN+ F+ +++R+ FG H G++ SV+V K + +G+ + GF
Sbjct: 675 DDDAPVQRAPSAKMLVKNVPFEATKKDIRELFGAH---GQLKSVRVPKQV-HGR--TRGF 728
Query: 665 GFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
F+EF S A N L+ T L G L+L+
Sbjct: 729 AFVEFVSRREAENAMAALRHTHLLGRHLVLEWA 761
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLA 551
LVKN+P+++++ ++ ++FG G L V +P T+ A V F+ EA A L
Sbjct: 688 MLVKNVPFEATKKDIRELFGAHGQLKSVRVPKQVHGRTRGFAFVEFVSRREAENAMAALR 747
Query: 552 YKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN-DAVVGEHDAKRAL 595
+ G L LEWA D + + +K A VGE D RAL
Sbjct: 748 HTHLLGRHLVLEWA-GDAEGTAGVDELREKTRHAYVGESDRPRAL 791
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 39/66 (59%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ VKN+P T+ +R+ F G++ ++ + G++R FAF+ F + +EAE A+
Sbjct: 686 AKMLVKNVPFEATKKDIRELFGAHGQLKSVRVPKQVHGRTRGFAFVEFVSRREAENAMAA 745
Query: 61 FNKSYL 66
++L
Sbjct: 746 LRHTHL 751
>gi|237841019|ref|XP_002369807.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
gi|211967471|gb|EEB02667.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
Length = 997
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 163/341 (47%), Gaps = 74/341 (21%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
GRL ++NLP+ T DELR ++G V+E H+VVD++T+R +G +V + PE A ++
Sbjct: 324 GRLLIQNLPFATTVDELRALCEEYGEVAETHLVVDEETQRPRGFGFVSFVFPEHAVASLP 383
Query: 359 VLDNSIFQGRLLHVMPAR-------------HKKSSDKQELHNSTSQGTKTLKQRREEER 405
L+ SIFQGR+L PAR ++ + +++L S+ + K + ++E+
Sbjct: 384 RLNGSIFQGRILRAFPARPDATRERRLQLREERRLARQKKLAGSSYKARKLQQLVSQDEQ 443
Query: 406 KASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLL--------------DREANDLA 451
A+E K WN L++ ++ + + + K+ LL D A +LA
Sbjct: 444 FAAE-----KVWNLLYVSANSAADAVLSELQADKAALLLDGEDAGRKGKALMDEGAGNLA 498
Query: 452 VR------IALGETQVIAETKKALTNAGVNVSSLE------------------------- 480
+ +AL E ++ +T+ + G+++ + E
Sbjct: 499 GKNTAAATVALMEAHLLTQTRAWIKAEGISLEAFERRGNTLLTATYRQSSGTGQENPGSG 558
Query: 481 ----------EFSAGKTDGLKRSNHVFLVKNLPYDS-SEGELAKMFGKFGSLDKVILPST 529
E G + RS +VK+LP +E EL ++F + G L + +L +
Sbjct: 559 TATGSGRGNQEKKEGSRSDIARSRDTLIVKHLPTAHVNEAELLRLFERVGPLARFLLAPS 618
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
KT+A+V + +A AF+ LAY++YK VPL+LE AP +V
Sbjct: 619 KTVAIVQYEREKDAEVAFRHLAYRQYKNVPLFLEKAPVNVF 659
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQ-KGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SR+ VKNLP Y+T L+ S GEITD L+R + GKSRQ AF+GF+T+++A
Sbjct: 51 SRLIVKNLPPYITTAELKQKLSSLGGEITDVCLLRNERGKSRQCAFVGFKTQEQAMNVKD 110
Query: 60 YFNKSYLDTCRISCEIA 76
+F +++ T ++ A
Sbjct: 111 HFQSTFIHTRKVEISYA 127
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGR-ILSVKVK-------KHLKNGKN---VS 661
V+ SLFVKN+NF T + L F R IL VK K + +NG +S
Sbjct: 783 VQGVSLFVKNVNFCTSEATLNDVFAGCPGLRRTILMVKKKAVSSSAAEATENGDAQTLLS 842
Query: 662 MGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK--------------KDEQVVK 707
MG+ F+EFDS E A C+ +QG ++D H L + + A +
Sbjct: 843 MGYAFVEFDSAENALAACKRMQGVVVDDHVLQISISKAAGRRPRGEPGTGVKVRGGASSG 902
Query: 708 KAEKDKSSTKLLVRNVAFEA 727
+ S K+LVRN+AF+A
Sbjct: 903 SGKSQAQSNKVLVRNLAFQA 922
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+S ++ VRNL + A+ +LR FS +GNV+ V I + RS+G +V +A + A A
Sbjct: 909 QSNKVLVRNLAFQASASDLRGLFSAYGNVTRVCIPRQHEG-RSRGFGFVDFATKQEAQNA 967
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDK 383
+E L S GR L + PA+ ++ S K
Sbjct: 968 VEALTGSHLYGRRLVLEPAQLEQVSKK 994
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+NL + LR FS G +T + R +G+SR F F+ F T+QEA+ A++
Sbjct: 911 NKVLVRNLAFQASASDLRGLFSAYGNVTRVCIPRQHEGRSRGFGFVDFATKQEAQNAVEA 970
Query: 61 FNKSYLDTCRISCEIAR 77
S+L R+ E A+
Sbjct: 971 LTGSHLYGRRLVLEPAQ 987
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
+ +S + V+NL F+ +LR F + G + V + + G+ S GFGF++F +
Sbjct: 907 QAQSNKVLVRNLAFQASASDLRGLFSAY---GNVTRVCIPRQ-HEGR--SRGFGFVDFAT 960
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKA 709
+ A N L G+ L G L+L+ EQV KKA
Sbjct: 961 KQEAQNAVEALTGSHLYGRRLVLEPAQL---EQVSKKA 995
>gi|221483682|gb|EEE21994.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii GT1]
Length = 997
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 163/341 (47%), Gaps = 74/341 (21%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
GRL ++NLP+ T DELR ++G V+E H+VVD++T+R +G +V + PE A ++
Sbjct: 324 GRLLIQNLPFATTVDELRALCEEYGEVAETHLVVDEETQRPRGFGFVSFVFPEHAVASLP 383
Query: 359 VLDNSIFQGRLLHVMPAR-------------HKKSSDKQELHNSTSQGTKTLKQRREEER 405
L+ SIFQGR+L PAR ++ + +++L S+ + K + ++E+
Sbjct: 384 RLNGSIFQGRILRAFPARPDATRERRLQLREERRLARQKKLAGSSYKARKLQQLVSQDEQ 443
Query: 406 KASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLL--------------DREANDLA 451
A+E K WN L++ ++ + + + K+ LL D A +LA
Sbjct: 444 FAAE-----KVWNLLYVSANSAADAVLSELQADKAALLLDGEDAGRKGKALMDEGAGNLA 498
Query: 452 VR------IALGETQVIAETKKALTNAGVNVSSLE------------------------- 480
+ +AL E ++ +T+ + G+++ + E
Sbjct: 499 GKNTAAATVALMEAHLLTQTRAWIKAEGISLEAFERRGNTLLTATYRQSSGTGQENPGSG 558
Query: 481 ----------EFSAGKTDGLKRSNHVFLVKNLPYDS-SEGELAKMFGKFGSLDKVILPST 529
E G + RS +VK+LP +E EL ++F + G L + +L +
Sbjct: 559 TATGSGRGNQEKKEGSRSDIARSRDTLIVKHLPTAHVNEAELLRLFERVGPLARFLLAPS 618
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
KT+A+V + +A AF+ LAY++YK VPL+LE AP +V
Sbjct: 619 KTVAIVQYEREKDAEVAFRHLAYRQYKNVPLFLEKAPVNVF 659
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQ-KGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SR+ VKNLP Y+T L+ S GEITD L+R + GKSRQ AF+GF+T+++A
Sbjct: 51 SRLIVKNLPPYITTAELKQKLSSLGGEITDVCLLRNERGKSRQCAFVGFKTQEQAMNVKD 110
Query: 60 YFNKSYLDTCRISCEIA 76
+F +++ T ++ A
Sbjct: 111 HFQSTFIHTRKVEISYA 127
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 65/140 (46%), Gaps = 25/140 (17%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGR-ILSVKVK-------KHLKNGKN---VS 661
V+ SLFVKN+NF T + L F R IL VK K + +NG +S
Sbjct: 783 VQGVSLFVKNVNFCTSEATLNDVFAGCPGLRRTILMVKKKAVSSSAAEATENGDAQTLLS 842
Query: 662 MGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK--------------KDEQVVK 707
MG+ F+EFDS E A C+ +QG ++D H L + + A +
Sbjct: 843 MGYAFVEFDSAENALAACKRMQGVVVDDHVLQISISKAAGRRPRGEPGTGVKVRGGASSG 902
Query: 708 KAEKDKSSTKLLVRNVAFEA 727
+ S K+LVRN+AF+A
Sbjct: 903 SGKSQAQSNKVLVRNLAFQA 922
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+S ++ VRNL + A+ +LR FS +GNV+ V I + RS+G +V +A + A A
Sbjct: 909 QSNKVLVRNLAFQASASDLRGLFSAYGNVTRVCIPRQHEG-RSRGFGFVDFATKQEAQNA 967
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDK 383
+E L S GR L + PA+ ++ S K
Sbjct: 968 VEALTGSHLYGRRLVLEPAQLEQVSKK 994
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
++ V+NL + LR FS G +T + R +G+SR F F+ F T+QEA+ A++
Sbjct: 912 KVLVRNLAFQASASDLRGLFSAYGNVTRVCIPRQHEGRSRGFGFVDFATKQEAQNAVEAL 971
Query: 62 NKSYLDTCRISCEIAR 77
S+L R+ E A+
Sbjct: 972 TGSHLYGRRLVLEPAQ 987
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
+ +S + V+NL F+ +LR F + G + V + + G+ S GFGF++F +
Sbjct: 907 QAQSNKVLVRNLAFQASASDLRGLFSAY---GNVTRVCIPRQ-HEGR--SRGFGFVDFAT 960
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKA 709
+ A N L G+ L G L+L+ EQV KKA
Sbjct: 961 KQEAQNAVEALTGSHLYGRRLVLEPAQL---EQVSKKA 995
>gi|345308678|ref|XP_001519607.2| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Ornithorhynchus anatinus]
Length = 454
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 146/288 (50%), Gaps = 30/288 (10%)
Query: 468 ALTNAGVNVS---SLEEFSAGKTD----------GLKRSNHVFLVKNLPYDSSEGELAKM 514
A+T G+N+ + E++ A D L+RS+ ++KNLP + E EL +M
Sbjct: 101 AITCVGLNIKFRINHEQYEAPAEDTNKIDDNSNRSLERSDDTIIIKNLPPSADEMELLEM 160
Query: 515 FGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
F KFG+L + + + +V ++E A AFK LAYKRY VPLYLEWAP
Sbjct: 161 FKKFGALLRFAVSPFGVMGIVQYMEKRAAKIAFKNLAYKRYNTVPLYLEWAPVKFFHDDV 220
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVES--RSLFVKNLNFKTCDENL 632
+ + VV + A A Q + + + D +S S++++NLNFKT D L
Sbjct: 221 EPR---LPNPVVQQEVAAEAASHTQTMAPEEEEEEEDDFKSLHASVYIRNLNFKTTDNGL 277
Query: 633 RKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHAL 692
RK + G I ++K +G +S GFGF EFD++ A N + L G+++DG +
Sbjct: 278 RKFLKD--LPGLITCKIIRKDGPDGNPLSAGFGFAEFDTISNAKNAIKTLTGSVVDGKLV 335
Query: 693 ILQLC--------HAKKDEQV--VKKAEKDKSSTKLLVRNVAFEAQRK 730
+++ H K + K+ +K S K++V+N+AF+A ++
Sbjct: 336 EMKIATGNSEPRKHMTKLQHPKGALKSNLEKPSPKIIVKNLAFQATKR 383
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S + VKNL F+ +L+K FG + G + S+++ K +KN GF F+EF S +
Sbjct: 368 SPKIIVKNLAFQATKRDLQKLFGFY---GNVKSIRLPKTIKNQHR---GFAFVEFMSKKE 421
Query: 675 ATNVCRDLQGTILDGHALILQL 696
A + LQ + L G LIL+
Sbjct: 422 AIHAIEMLQNSHLYGRHLILEF 443
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 125/314 (39%), Gaps = 61/314 (19%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHI-------VVDKDTKRSKGIAY--VLYAIPE 351
+ ++NLP +A E EL E F KFG + + +V KR+ IA+ + Y
Sbjct: 143 IIIKNLPPSADEMELLEMFKKFGALLRFAVSPFGVMGIVQYMEKRAAKIAFKNLAYKRYN 202
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTL----KQRREEERKA 407
+ +E F + +P +QE+ + T+T+ ++ E++ K+
Sbjct: 203 TVPLYLEWAPVKFFHDDVEPRLP----NPVVQQEVAAEAASHTQTMAPEEEEEEEDDFKS 258
Query: 408 SEASGNTKAWN--------SLFMR--PDTVVENIARKHGVSKSDLLDREANDLAVRIALG 457
AS + N F++ P + I RK G + N L+
Sbjct: 259 LHASVYIRNLNFKTTDNGLRKFLKDLPGLITCKIIRKDG--------PDGNPLSAGFGFA 310
Query: 458 ETQVIAETK---KALTNAGV------------------NVSSLEEFSAGKTDGLKRSNHV 496
E I+ K K LT + V +++ L+ L++ +
Sbjct: 311 EFDTISNAKNAIKTLTGSVVDGKLVEMKIATGNSEPRKHMTKLQHPKGALKSNLEKPSPK 370
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPST-----KTLALVVFLEPVEAAAAFKGLA 551
+VKNL + +++ +L K+FG +G++ + LP T + A V F+ EA A + L
Sbjct: 371 IIVKNLAFQATKRDLQKLFGFYGNVKSIRLPKTIKNQHRGFAFVEFMSKKEAIHAIEMLQ 430
Query: 552 YKRYKGVPLYLEWA 565
G L LE++
Sbjct: 431 NSHLYGRHLILEFS 444
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+I VKNL T+ L+ F G + +L +T + R FAF+ F +++EA AI+
Sbjct: 370 KIIVKNLAFQATKRDLQKLFGFYGNVKSIRLPKTIKNQHRGFAFVEFMSKKEAIHAIEML 429
Query: 62 NKSYL 66
S+L
Sbjct: 430 QNSHL 434
>gi|89273975|emb|CAJ81490.1| RNA binding motif protein 19 [Xenopus (Silurana) tropicalis]
Length = 261
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 103/167 (61%), Gaps = 9/167 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + EDR R+ F+ G +TD L TKDGK R+F FIGF +E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGIKEDRFRELFAAFGTLTDCSLKYTKDGKFRKFGFIGFVSEEEAKAALGH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK------KEKEVSEDEKNPVLAAKRGE 114
FNKS++DT R+S E + GDP+ P+ WS++S K KEK++ + V + +
Sbjct: 62 FNKSFIDTSRVSVEFCKSFGDPDKPKAWSKHSQKNAKDSEKEKDLKQTPTESVNSKNSKK 121
Query: 115 KKT-IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK 160
KKT +E++ + DD EFL V Q R K+ W NDT + QK++
Sbjct: 122 KKTALEELEKEDD--FKEFLSVHQNRTKTSTWDNDTHAAVEKKQKSQ 166
>gi|281427346|ref|NP_001163962.1| RNA binding motif protein 19 [Xenopus (Silurana) tropicalis]
gi|189442184|gb|AAI67335.1| Unknown (protein for MGC:135501) [Xenopus (Silurana) tropicalis]
Length = 542
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 129/226 (57%), Gaps = 15/226 (6%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + EDR R+ F+ G +TD L TKDGK R+F FIGF +E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGIKEDRFRELFAAFGTLTDCSLKYTKDGKFRKFGFIGFVSEEEAKAALGH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK------KEKEVSEDEKNPVLAAKRGE 114
FNKS++DT R+S E + GDP+ P+ WS++S K KEK++ + V + +
Sbjct: 62 FNKSFIDTSRVSVEFCKSFGDPDKPKAWSKHSQKNAKVSEKEKDLKQTPTESVNSKNSKK 121
Query: 115 KKT-IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
KKT +E++ + DD EFL V Q R K+ W NDT + QK++ ++
Sbjct: 122 KKTALEELEKEDD--FKEFLSVHQNRTKTSTWDNDTHAAVEKKQKSQSQDDYLNF----- 174
Query: 174 KSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKD 219
++ ++ + +D ++E ++ A +SDMDY KS+V D
Sbjct: 175 -DSDSEEENSENELGSDDSSSESTEKLALQSEISDMDYLKSKVVPD 219
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 89/133 (66%), Gaps = 7/133 (5%)
Query: 290 DVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAI 349
++Q++V ESGRLFVRNLPYT ED+L + FSK+G +SE+H +D TK+ KG A+V + I
Sbjct: 377 ELQEDVSESGRLFVRNLPYTCNEDDLEKLFSKYGPISEIHFPIDSLTKKPKGFAFVTFLI 436
Query: 350 PESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASE 409
E A +A +D IFQGR+LHV+P+ KK E++ S + + KQ+ +++ +S
Sbjct: 437 TEHAVKAYAEVDGQIFQGRMLHVLPSAAKKD----EVNESEGEASGYKKQKALKDKASSS 492
Query: 410 ASGNTKAWNSLFM 422
+S N WN+LFM
Sbjct: 493 SSHN---WNTLFM 502
Score = 39.3 bits (90), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 607 DIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGF 666
++ D ES LFV+NL + +++L K F ++ G I + + + GF F
Sbjct: 377 ELQEDVSESGRLFVRNLPYTCNEDDLEKLFSKY---GPISEIHFP--IDSLTKKPKGFAF 431
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDE----------QVVKKAEKDKSST 716
+ F E A ++ G I G L + AKKDE +KA KDK+S+
Sbjct: 432 VTFLITEHAVKAYAEVDGQIFQGRMLHVLPSAAKKDEVNESEGEASGYKKQKALKDKASS 491
Query: 717 ------KLLVRNVAFEAQRK 730
L FEAQ +
Sbjct: 492 SSSHNWNTLFMGTYFEAQSR 511
>gi|156103151|ref|XP_001617268.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148806142|gb|EDL47541.1| RNA binding protein, putative [Plasmodium vivax]
Length = 1127
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/474 (24%), Positives = 200/474 (42%), Gaps = 114/474 (24%)
Query: 331 VVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHK------KSSDKQ 384
+++ D K A+V + P + RA +L+N+IF+G++L V A+ K K
Sbjct: 492 ILNSDLTNVKVYAFVNFMFPSACERAKNILNNAIFRGKVLSVKYAKDKCGDYEYTEKGKN 551
Query: 385 ELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD 444
+ S +KT ++ E +K N WN L+ ++ + + +++ S +L+
Sbjct: 552 NVFIKLSHDSKTSYKKILEIQKKRNCQ-NENIWNLLYTDINSSIHSFCKENKCSPQSILN 610
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEF---------------------S 483
++AV ++L ET +I + K+ + G+ + + E+
Sbjct: 611 IRDRNIAVNVSLTETYIINKMKEWIRKEGIYLEAFEQIYKKRSEGEEPSGKEGGEPSGKP 670
Query: 484 AGKTDG--------------------------------LKRSNHVFLVKNLPYDSSEGEL 511
+ +TDG KRS+ +VKNL +++ E+
Sbjct: 671 SAETDGKAGGEPSANQNGETSGEGPPGEEPSRANHVVKYKRSDDTIIVKNLSVQTNQKEV 730
Query: 512 AKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS 571
+F KFG L KV +A++ F + A AF +Y RYK +PLYLEWAP ++
Sbjct: 731 ISLFKKFGVLSKVSFSPYNNIAILQFEKAENAKKAFISNSYIRYKKLPLYLEWAPMNLFE 790
Query: 572 QSS------------------------------------TSKGNQKNDAVVGEHDAKRAL 595
+ T++G+ + V + + A
Sbjct: 791 RKGDQDGRGSGGSGGSGGSGESGGIGGSSGSRGSGSKGETNEGDTPANEAVKKSEQGAAP 850
Query: 596 LEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEH--------IKEGRILS 647
E+Q +++ + + S+++KNLNF T +E+L+K F + +K + +S
Sbjct: 851 KEEQHHSESESSDE--EITHASIYIKNLNFNTKEEDLKKLFEKLDGFITCNIVKSKKAIS 908
Query: 648 VKVKKHLKNGKN-----VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL 696
KK+L+ GK +S G+GF+EF S E A + L T LDGH L L L
Sbjct: 909 ---KKNLEKGKAPEQKLMSQGYGFVEFKSKELAVEAIKKLTATTLDGHVLELSL 959
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 12/88 (13%)
Query: 1 SRICVKNLPKYVTE-DRLRDFFSQKG----EITDAKLMRTKD-------GKSRQFAFIGF 48
+R+ +KN+PKY+ E D + FF KG +ITD K+M+ K +SR+ FIGF
Sbjct: 41 TRLIIKNVPKYMNEMDLKKHFFKMKGNYEFKITDIKIMKRKKIVKNKEVFESRKICFIGF 100
Query: 49 RTEQEAEEAIKYFNKSYLDTCRISCEIA 76
+ + E K FN +Y++T +I E A
Sbjct: 101 ISNTDCENFKKSFNNTYINTSKIVVEDA 128
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 305 NLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSI 364
NL + T++ELR+ FS FGN+ V I + RS+G A+V + AIE L ++
Sbjct: 992 NLAFQVTKEELRKLFSAFGNIKSVRIPKNA-YNRSRGYAFVEFMSKNECLTAIESLQHTH 1050
Query: 365 FQGRLLHV 372
GR L +
Sbjct: 1051 LYGRHLII 1058
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 622 NLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRD 681
NL F+ E LRK F G I SV++ K N N S G+ F+EF S
Sbjct: 992 NLAFQVTKEELRKLFSAF---GNIKSVRIPK---NAYNRSRGYAFVEFMSKNECLTAIES 1045
Query: 682 LQGTILDGHALILQL 696
LQ T L G LI+
Sbjct: 1046 LQHTHLYGRHLIIDF 1060
>gi|399949922|gb|AFP65578.1| polyadenylate binding protein [Chroomonas mesostigmatica CCMP1168]
Length = 545
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 205/452 (45%), Gaps = 56/452 (12%)
Query: 286 SSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYV 345
S S + ++ E+G++F+RN ++++++ FS+FG VS + K K+S A+V
Sbjct: 113 SESSRLFEKTFETGKIFIRNFSNQCSQEDIKNLFSQFGFVSSFFVYPYKFGKKSSNEAFV 172
Query: 346 LYAIPESASRAIEVLDNSIFQGRLLHVMP--ARHKKSSDKQELHNSTSQGTKTLKQRREE 403
+A+PE A +A LD IF+GR+LH++P R + K+E +K K R+
Sbjct: 173 QFALPECAIKAAFFLDGKIFRGRILHILPFFPRFLNLNPKKE----EFLFSKFKKIRKNM 228
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAV-RIALGETQVI 462
E E S N++ W + F+ P+++V+ K G +K + + E+ L ++A+ E+++
Sbjct: 229 E---IENSINSRLWFTFFVCPESLVKIFMNKFGKNKKVMTNYESIKLNFKKMAITESRLQ 285
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
E K L G+++++ K+S +F +KN D S K KFG +
Sbjct: 286 NEIKTILGLQGIDINTFNPIFIK-----KKSKRIFFLKNFG-DFSIVYFKKTLEKFGKIK 339
Query: 523 KVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSD-----------VLS 571
K+IL + LV F + +A AF L K ++ WAP + S
Sbjct: 340 KMILVCSANFILVEFQKKKDANIAFIYLEKKNNNRKNFFIAWAPLNSSKNFPKEYKKYKS 399
Query: 572 QSSTSKGNQKNDAVVGEHDAKRAL--------LEQQLEGVTDADIDPDRV---------- 613
+ + + KN + E +K + +++ E + D+ + +
Sbjct: 400 RKNLNYFFSKNSLFLKERKSKNFISNNIKQKKIKKLKENINDSQMGFKEILFFKNKKKKF 459
Query: 614 -----ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIE 668
+ V+N+ F E ++K F G+I+S+++ K+ K GK+ GF FIE
Sbjct: 460 TKKETFHYKILVRNIPFGVNLEKIKKIFENF---GKIISIRMPKN-KLGKH--RGFAFIE 513
Query: 669 FDSVETATNVCRDLQGTILDGHALILQLCHAK 700
F S+E A Q L L + L K
Sbjct: 514 FKSLEEAKKTVLSTQNIHLFNRHLFVSLIKCK 545
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+CVKNLP ++TE++L FS+ G ITD K++R K+ K + F F+GF +++AE+AI
Sbjct: 13 SRLCVKNLPSWITEEKLMLVFSKYGIITDIKIIRDKE-KKKDFCFVGFFKKKDAEKAIND 71
Query: 61 FNKSYLDTCRISCEIA 76
N +L +I+ E A
Sbjct: 72 ANFCFLGNKKITVEHA 87
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+I V+N+P V ++++ F G+I ++ + K GK R FAFI F++ +EA++ +
Sbjct: 468 KILVRNIPFGVNLEKIKKIFENFGKIISIRMPKNKLGKHRGFAFIEFKSLEEAKKTV 524
>gi|255582596|ref|XP_002532080.1| RNA binding motif protein, putative [Ricinus communis]
gi|223528250|gb|EEF30303.1| RNA binding motif protein, putative [Ricinus communis]
Length = 181
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/69 (86%), Positives = 62/69 (89%)
Query: 662 MGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVR 721
MGFGFIEFD+VETATNVC DLQG +LDGHALILQLCHAKKDEQV K EKDKSSTKLLVR
Sbjct: 1 MGFGFIEFDAVETATNVCTDLQGIVLDGHALILQLCHAKKDEQVRKNVEKDKSSTKLLVR 60
Query: 722 NVAFEAQRK 730
NVAFEA K
Sbjct: 61 NVAFEATEK 69
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRN+ + ATE +LR+ FS FG + + + V R G A+V Y + A A+
Sbjct: 54 STKLLVRNVAFEATEKDLRQLFSPFGQIKRLRLPVKFGNHR--GFAFVEYVTKQEAQNAL 111
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
+ L ++ GR H++ R K+ +EL T+
Sbjct: 112 QALSSTHLYGR--HLVLERAKEGESLEELRARTA 143
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+ TE LR FS G+I +L K G R FAF+ + T+QEA+ A++
Sbjct: 55 TKLLVRNVAFEATEKDLRQLFSPFGQIKRLRL-PVKFGNHRGFAFVEYVTKQEAQNALQA 113
Query: 61 FNKSYL 66
+ ++L
Sbjct: 114 LSSTHL 119
>gi|149063465|gb|EDM13788.1| RNA binding motif protein 19 (predicted) [Rattus norvegicus]
Length = 451
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 124/233 (53%), Gaps = 32/233 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + EDR R F+ G +TD L TK+GK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEDRFRQLFAAFGTLTDCSLKFTKEGKFRKFGFIGFKSEEEAQAALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSED---EKNPVLAAKRGEK 115
F++S++DT RI+ E + GDP+ PR WS+++ K + K+ S+D K+
Sbjct: 62 FHRSFIDTSRITVEFCKSFGDPSKPRAWSKHAQKPSQPKQPSQDSIPSDTKKDKKKKKVP 121
Query: 116 KTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKS 175
+EK+ E D + EFL + Q R + WAND L + KAK S +
Sbjct: 122 SDLEKLKE--DAEFQEFLSIHQKRTQVATWANDALEAELPKAKAKPSSDY---------- 169
Query: 176 ITLHVKSDKSNVITDSQATEKSKN------------AAADELMSDMDYFKSRV 216
L+ SD SN + ++ E+ AA + +SDMDY KS++
Sbjct: 170 --LNFDSD-SNSDSGQESEEEPAGEDGEEEQGLQPKAAVQKELSDMDYLKSKM 219
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 10/53 (18%)
Query: 282 GNPSSSSKDVQQEVL----------ESGRLFVRNLPYTATEDELREHFSKFGN 324
G P SSS Q L +SGRLFVRNL YT++E++L + FS +G+
Sbjct: 375 GAPKSSSAPWQGRTLGEHEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGD 427
>gi|299115735|emb|CBN74300.1| RNA binding protein [Ectocarpus siliculosus]
Length = 875
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 102/156 (65%), Gaps = 9/156 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+ VKN+PK+V E RL F+++GE++DAK++RTKDGKSRQFAF+GF TE +AEEA+KY
Sbjct: 15 TRLIVKNVPKHVDEKRLWQHFAERGEVSDAKIVRTKDGKSRQFAFVGFTTESDAEEALKY 74
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS--LKKEKEVSEDEKNPVLAAKRGEKKTI 118
+N+++LDT RI E A+ G+ + RPWS++S + ++++E + + AK ++KT
Sbjct: 75 YNQTFLDTSRIQVERAQPKGNAGIARPWSKHSEGSSRAQKLAEAKARKEVKAKDKKRKTD 134
Query: 119 EKVTENDDPQLL-------EFLQVMQPRVKSKMWAN 147
E + EF+ ++ R +++ W N
Sbjct: 135 ESSSAKAAAASARGKVEKEEFMAALKKRSEARFWDN 170
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 126/309 (40%), Gaps = 54/309 (17%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+NLPY+A EL + F FG+V V + SK +A V + A +A + L
Sbjct: 533 ILVKNLPYSAEAAELAKRFGAFGDVGRVLLPP------SKTVALVEFLAASDAKKAFKRL 586
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASE---ASGN-TKA 416
+ FQ LL++ A K D E + + + K EE K E A+G +K
Sbjct: 587 ACARFQHVLLYLEWAPLKAFKDTFEPSSKPASLPASEKAATGEEAKVDEDEVAAGRASKE 646
Query: 417 WNSLFMRP----------DTVVE---------NIARKHGVSKSD---------------- 441
++F++ T E +I RK G S+
Sbjct: 647 PLTMFVKNLSFSTTEAGLRTCFEKAGLQVRSVSIPRKKGPGASEATLSMGFGFVECADAS 706
Query: 442 LLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKN 501
L+D+ L + G + + K LT A SS S G D LKR+ +++N
Sbjct: 707 LVDKSLKTLQGTVLDGHALELKRSTKRLTPATKASSSSSSSSQG--DSLKRTK--IIIRN 762
Query: 502 LPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYK 556
+P+ ++ E+ ++ FG L +V LP + A V FL EA A K L +
Sbjct: 763 IPFQATAKEIRELCSSFGQLKRVRLPKKFDGGHRGFAFVDFLTAQEAMGAKKSLESTHFY 822
Query: 557 GVPLYLEWA 565
G L EWA
Sbjct: 823 GRHLVGEWA 831
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
Q + L+ ++ +RN+P+ AT E+RE S FG + V + D +G A+V + +
Sbjct: 749 QGDSLKRTKIIIRNIPFQATAKEIRELCSSFGQLKRVRLPKKFDGGH-RGFAFVDFLTAQ 807
Query: 352 SASRAIEVLDNSIFQGRLL 370
A A + L+++ F GR L
Sbjct: 808 EAMGAKKSLESTHFYGRHL 826
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I ++N+P T +R+ S G++ +L + DG R FAF+ F T QEA A K
Sbjct: 756 TKIIIRNIPFQATAKEIRELCSSFGQLKRVRLPKKFDGGHRGFAFVDFLTAQEAMGAKKS 815
Query: 61 FNKSYL 66
++
Sbjct: 816 LESTHF 821
>gi|26343509|dbj|BAC35411.1| unnamed protein product [Mus musculus]
Length = 521
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 124/232 (53%), Gaps = 31/232 (13%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA+ A+ +
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQAALNH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSED--EKNPVLAAKRGEKK 116
F++S++DT RI+ E + GDP+ PR WS+++ K + K+ S+D + K+
Sbjct: 62 FHRSFIDTTRITVEFCKSFGDPSKPRAWSKHAQKSSQPKQPSQDSVPSDTKKDKKKKGPS 121
Query: 117 TIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSI 176
+EK+ E D + EFL + Q R + WAND L + K K S +
Sbjct: 122 DLEKLKE--DAKFQEFLSIHQKRTQVATWANDALEAKLPKAKTKASSDY----------- 168
Query: 177 TLHVKSDKSNVITDSQATEKS------------KNAAADELMSDMDYFKSRV 216
L+ SD SN + ++ E+ AA + +SDMDY KS++
Sbjct: 169 -LNFDSD-SNSDSGQESEEEPAREDPEEEQGLQPKAAVQKELSDMDYLKSKM 218
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 68/101 (67%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++++ +SGRLFVRNL YT++E++L + FS +G +SE+H +D TK+ KG A+V + PE
Sbjct: 393 EEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPE 452
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ 392
A +A +D +FQGR+LHV+P+ KK + + S Q
Sbjct: 453 HAVKAYAEVDGQVFQGRMLHVLPSTIKKEASQAPAALSPPQ 493
>gi|440789720|gb|ELR11019.1| RNA binding protein, putative [Acanthamoeba castellanii str. Neff]
Length = 838
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 118/193 (61%), Gaps = 20/193 (10%)
Query: 14 EDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRISC 73
EDRLR F Q+GE+TD K+M+T DG+SR F FIGFRTE+EA+ A+ +FN +++DT +IS
Sbjct: 3 EDRLRQHFGQRGEVTDVKIMKTADGRSRLFGFIGFRTEKEAKAAMNFFNNTFIDTSKISV 62
Query: 74 EIARKVGDPNMPRPWSRYS--------LKKEKEVSEDEKNPVLAAKRGEKKTIEKVTE-- 123
E+AR VGD +PRPWS+YS +++K+ E++K L KR K ++ E
Sbjct: 63 EMARPVGDTALPRPWSKYSKGSSLHEQKEQKKKEVEEKKEKALDRKRKWKDILDVKEELA 122
Query: 124 NDDPQLL-EFLQVMQPRVKS---KMWANDTLIGL----MADQKAKVSENISQAIKGGE-- 173
DPQLL +FL + R + K+WAND L+ +A ++ V + + ++ GE
Sbjct: 123 KSDPQLLTDFLSSSKSRQSADARKVWANDLLLPTPGTELASKQPVVKQVKKRKLEEGETV 182
Query: 174 KSITLHVKSDKSN 186
K + L V++ K+
Sbjct: 183 KEVVLAVRNRKTG 195
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 133/319 (41%), Gaps = 49/319 (15%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V+N+P+ +ELR+ FSKFG+VS V + ++ +A + Y P A R + L
Sbjct: 519 ILVKNIPHQTKLEELRDMFSKFGSVSRVIL------PPARTLALIEYLEPSEARRGFKNL 572
Query: 361 DNSIFQGRLLHV--MP-ARHKKSSDKQE---------LHNSTSQGTKTLKQRREEERKAS 408
+ F L++ P A + DK E ++ + T T K + E +
Sbjct: 573 AYTKFHHVPLYLEWAPLAIIGQKPDKPESLEDADDDDDDDAPIKTTVTDKSKLLEAEEME 632
Query: 409 EASGNTKAWNSL-FMRPD----TVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI- 462
G T +L F D T+ E +A V+ + D + + + G + +
Sbjct: 633 RLEGTTLYVKNLNFKTTDDGLRTMFEKVAPVRSVTVAKRKDVKKGGQMISLGYGFVEFVK 692
Query: 463 ----AETKKALTNAGVNVSSLE-EFSAG--KTDGLKRSNH-------------VFLVKNL 502
+ K L ++ +LE F+ G K D ++SN LVKN+
Sbjct: 693 RDGALKAIKQLQGKQLDNHALEITFAKGGRKADTKQQSNKRKAAQGTQMKPTCTILVKNV 752
Query: 503 PYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLAYKRYKG 557
+++++ E+ ++F FG L V +P + A V F+ EA AF+ L G
Sbjct: 753 AFEATKAEIRELFATFGQLKSVRVPKKMDGRARGFAFVDFITKQEAKNAFQSLQDTHLYG 812
Query: 558 VPLYLEWAPSDVLSQSSTS 576
L LE+ + SQ + +
Sbjct: 813 RHLVLEFVQNSTASQQNQT 831
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I VKN+ T+ +R+ F+ G++ ++ + DG++R FAF+ F T+QEA+ A +
Sbjct: 747 ILVKNVAFEATKAEIRELFATFGQLKSVRVPKKMDGRARGFAFVDFITKQEAKNAFQSLQ 806
Query: 63 KSYL 66
++L
Sbjct: 807 DTHL 810
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
++ VKN+ F+ +R+ F G++ SV+V K + +G+ + GF F++F + + A
Sbjct: 746 TILVKNVAFEATKAEIRELFATF---GQLKSVRVPKKM-DGR--ARGFAFVDFITKQEAK 799
Query: 677 NVCRDLQGTILDGHALILQLCH 698
N + LQ T L G L+L+
Sbjct: 800 NAFQSLQDTHLYGRHLVLEFVQ 821
>gi|6474847|dbj|BAA87307.1| Hypothetical protein YPR112c [Schizosaccharomyces pombe]
Length = 160
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 95/152 (62%), Gaps = 5/152 (3%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
Q + E+ RLF+RNL Y+ ED+L+ F FG + +VH+ +DK T KG AY+ + +
Sbjct: 14 QLISETKRLFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADD 73
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASG 412
A RA LD FQGRLLHV+PA+ + S L + + LK++RE +RK + AS
Sbjct: 74 AVRAYLELDAKPFQGRLLHVLPAKARSSI----LLDDYALSKLPLKKQRELKRKNTAAS- 128
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLD 444
+T +WNSL+M D VV ++A + GV K+D+LD
Sbjct: 129 STFSWNSLYMNADAVVTSLASRLGVKKTDILD 160
>gi|388854650|emb|CCF51807.1| probable RNA-binding protein [Ustilago hordei]
Length = 874
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 14/160 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ V+ LP Y+T+ RLR+ FSQKG +TD KLMR DG SR+F F+G+R+E+EA +A+ Y
Sbjct: 2 SRLIVRGLPSYLTDARLREHFSQKGAVTDVKLMRRPDGTSRKFGFVGYRSEEEARQALDY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
FN++++DT RIS + A+K+GD + + R + + ++ G+K+ +K
Sbjct: 62 FNRTFIDTARISIQFAKKIGDEELAK--QREDRRNRRTAGVADQGGEEGRGEGKKRKFDK 119
Query: 121 VTENDDP------------QLLEFLQVMQPRVKSKMWAND 148
D EF+ VMQP+ K K W N+
Sbjct: 120 ADGKDGEGQKKRGKKGGAISFEEFMSVMQPKAKRKAWQNE 159
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I VKNLP T+ +RD FS +G + +L + D +R FAF+ + T +EA+ A++
Sbjct: 737 TKILVKNLPFEATKKDIRDLFSSQGLVKSVRLPKKFDNSTRGFAFVEYTTVREAQAAMEA 796
Query: 61 FNKSYL 66
++L
Sbjct: 797 LKHTHL 802
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ V+NLP+ AT+ ++R+ FS G V V + D ++G A+V Y A A+E
Sbjct: 738 KILVKNLPFEATKKDIRDLFSSQGLVKSVRLPKKFDNS-TRGFAFVEYTTVREAQAAMEA 796
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 797 LKHTHLLGRHL 807
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
LVKNLP+++++ ++ +F G + V LP ST+ A V + EA AA + L +
Sbjct: 740 LVKNLPFEATKKDIRDLFSSQGLVKSVRLPKKFDNSTRGFAFVEYTTVREAQAAMEALKH 799
Query: 553 KRYKGVPLYLEWA 565
G L L+W+
Sbjct: 800 THLLGRHLVLQWS 812
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ VKNL F+ +++R F +G + SV++ K N + GF F+E+ +V A
Sbjct: 739 ILVKNLPFEATKKDIRDLFSS---QGLVKSVRLPKKFDNS---TRGFAFVEYTTVREAQA 792
Query: 678 VCRDLQGTILDGHALILQ 695
L+ T L G L+LQ
Sbjct: 793 AMEALKHTHLLGRHLVLQ 810
>gi|343427578|emb|CBQ71105.1| probable RNA-binding protein [Sporisorium reilianum SRZ2]
Length = 866
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 91/162 (56%), Gaps = 14/162 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ V+ LP Y+T+ RLR+ FSQKG +TD KLMR DG SR+F F+G+R++ EA++A+ Y
Sbjct: 2 SRLIVRGLPSYLTDARLREHFSQKGAVTDVKLMRRPDGTSRKFGFVGYRSDDEAQQALDY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEV--------------SEDEKNP 106
F+++++DT RIS E+A+K+GD + + ++ + K
Sbjct: 62 FDRTFIDTSRISIELAKKIGDEELTKQREERRNRRNAAAATPEASSSSASTSDARKRKAD 121
Query: 107 VLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWAND 148
AK E +K + EF+ VMQP+ K K W N+
Sbjct: 122 KFDAKDEEGAGKKKSKKGAAISFEEFMSVMQPKAKRKAWQNE 163
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R F +G++ SV++ K N + GFGF+E+ +V A
Sbjct: 730 ILIKNLPFEATKKDIRDLFAS---QGQLKSVRLPKKFDNS---TRGFGFVEYTTVREAQA 783
Query: 678 VCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLL 719
L+ T L G L+LQ HA KD + + ++DK+ + +
Sbjct: 784 AFEALKHTHLLGRHLVLQWSHAAKDSREEVQMQRDKTKSGFV 825
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+I +KNLP T+ +RD F+ +G++ +L + D +R F F+ + T +EA+ A +
Sbjct: 729 KILIKNLPFEATKKDIRDLFASQGQLKSVRLPKKFDNSTRGFGFVEYTTVREAQAAFEAL 788
Query: 62 NKSYL 66
++L
Sbjct: 789 KHTHL 793
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAY 552
L+KNLP+++++ ++ +F G L V LP ST+ V + EA AAF+ L +
Sbjct: 731 LIKNLPFEATKKDIRDLFASQGQLKSVRLPKKFDNSTRGFGFVEYTTVREAQAAFEALKH 790
Query: 553 KRYKGVPLYLEWA 565
G L L+W+
Sbjct: 791 THLLGRHLVLQWS 803
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R+ F+ G + V + D ++G +V Y A A E
Sbjct: 729 KILIKNLPFEATKKDIRDLFASQGQLKSVRLPKKFDNS-TRGFGFVEYTTVREAQAAFEA 787
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELH 387
L ++ GR L V+ H ++E+
Sbjct: 788 LKHTHLLGRHL-VLQWSHAAKDSREEVQ 814
>gi|395744907|ref|XP_002823849.2| PREDICTED: probable RNA-binding protein 19-like [Pongo abelii]
Length = 336
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 138/276 (50%), Gaps = 49/276 (17%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R R F+ G +TD L TKDGK R+F FIGF++E+EA++A+K+
Sbjct: 39 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKALKH 98
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK--KEKEVSEDEKNPVLAAKRGEKKTI 118
FNKS++DT RI+ E + GDP PR WS+++ K + K+ +D P +
Sbjct: 99 FNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSATPEIK--------- 149
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAK-VSENISQAIKGGEKSIT 177
K+ WAND + K+K S+ ++ G++S
Sbjct: 150 ----------------------KAATWANDGPDAESSKGKSKPASDYLNFDSDSGQESEE 187
Query: 178 LHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDD-DD 236
D + +A+ + K A EL SDMDY KS++ K S S S ++ + D+
Sbjct: 188 EGAGKD-----LEEEASLEPKTAVQKEL-SDMDYLKSKMVKSGSSSSSGEEESEDEAVHC 241
Query: 237 DDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEE 272
D+G E EEE++ ++++ G G+E
Sbjct: 242 DEGSEAEEEDSPTT--------PVLQEGNSKGAGQE 269
>gi|432957822|ref|XP_004085896.1| PREDICTED: probable RNA-binding protein 19-like, partial [Oryzias
latipes]
Length = 278
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 87/154 (56%), Gaps = 2/154 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + E+R F+ G +TD L TKDGK R+F F+GF++E++A A+K+
Sbjct: 71 SRLIVKNLPNGMKEERFSSMFAAFGTLTDCSLKFTKDGKFRKFGFVGFKSEEDASRALKH 130
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRY--SLKKEKEVSEDEKNPVLAAKRGEKKTI 118
FN+S++DT R++ EI + GDP + WS++ S +EK + + I
Sbjct: 131 FNRSFVDTSRVTVEICKAFGDPTKGKAWSKHTQSAGQEKPSGPAPTEGKKKKNQKKDTAI 190
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIG 152
+D + EFL V Q R ++ WAND + G
Sbjct: 191 GLGNLEEDQEFKEFLSVHQNRSQAPTWANDAVQG 224
>gi|389586278|dbj|GAB69007.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 1121
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 133/268 (49%), Gaps = 30/268 (11%)
Query: 490 LKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKG 549
KRS+ +VKNL +++ E+ +F K+G L KV +A++ F + A AF
Sbjct: 728 YKRSDDTIIVKNLSIQTNQKEVISLFKKYGVLSKVSFSPYNNIAILQFEKAENAKKAFIS 787
Query: 550 LAYKRYKGVPLYLEWAPSDVLSQSSTSKG---NQKNDAVVGEHDAKRALLEQQLEGVTDA 606
+Y RYK +PLYLEWAP ++ + G + K GE AK A+ + + E
Sbjct: 788 NSYIRYKKLPLYLEWAPMNLFERKGDQDGVGSDSKGKTNGGEIPAKEAVKKSEHEAAPKK 847
Query: 607 D-------IDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV-------KK 652
+ + + S+++KNLNF T +E+L+K F E + EG I V KK
Sbjct: 848 EQHHSESESSDEEITHASIYIKNLNFNTKEEDLKKLF-EKL-EGFITCNIVKSKKAISKK 905
Query: 653 HLKNGKN-----VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVK 707
+ + GK +S G+GF+EF S E A + L T LDGH L L L + ++ K
Sbjct: 906 NQEKGKETEQKLMSQGYGFVEFKSKELAVEAIKKLTATTLDGHVLELSLSRNRVKKKNNK 965
Query: 708 KAEKDKS------STKLLVRNVAFEAQR 729
E+ + + KLLV+N+AF+ +
Sbjct: 966 NNEEKEVVKEKKITKKLLVKNLAFQVTK 993
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 16/174 (9%)
Query: 331 VVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHK------KSSDKQ 384
+++ D K A+V + P + RA L+++IF+G++L V A+ K K
Sbjct: 491 ILNSDLTNVKVYAFVNFMFPSACERAKNFLNHAIFRGKVLSVKYAKEKFGDYEYTEKGKN 550
Query: 385 ELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD 444
+ S +KT ++ E +K N WN L+ ++ + + +++ S +L+
Sbjct: 551 NVLIKLSHDSKTSYKKILEIQKKRNCQ-NENIWNILYTDINSSIHSFCKENKCSPHSILN 609
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEF---------SAGKTDG 489
+ ++AV ++L ET +I + K+ + G+ + + E+ +GK DG
Sbjct: 610 IKDRNIAVNVSLTETYIINKMKEWIKKEGIYLEAFEQIYRKRDEGGEPSGKADG 663
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 12/88 (13%)
Query: 1 SRICVKNLPKYVTE-DRLRDFFSQKG----EITDAKLMRTKD-------GKSRQFAFIGF 48
+R+ +KN+PKY+ E D + FF KG +ITD K+M+ K +SR+ FIGF
Sbjct: 33 TRLIIKNVPKYMNEMDLKKHFFKMKGNYEFKITDIKIMKRKKLVKNKEFFESRKICFIGF 92
Query: 49 RTEQEAEEAIKYFNKSYLDTCRISCEIA 76
+ E K FN +Y++T +I E A
Sbjct: 93 INNTDCENFKKSFNNTYINTSKIVIEDA 120
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L V+NL + T++ELR+ FS FGN+ V I + RS+G A+V + AIE
Sbjct: 981 KLLVKNLAFQVTKEELRKLFSAFGNIKSVRIPKNA-YNRSRGYAFVEFMSKNECLTAIES 1039
Query: 360 LDNSIFQGRLLHV 372
L ++ GR L +
Sbjct: 1040 LQHTHLYGRHLII 1052
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
++ L VKNL F+ E LRK F G I SV++ K N N S G+ F+EF S
Sbjct: 979 TKKLLVKNLAFQVTKEELRKLFSAF---GNIKSVRIPK---NAYNRSRGYAFVEFMSKNE 1032
Query: 675 ATNVCRDLQGTILDGHALILQLC 697
LQ T L G LI+
Sbjct: 1033 CLTAIESLQHTHLYGRHLIIDFA 1055
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLA 551
LVKNL + ++ EL K+F FG++ V +P ++ A V F+ E A + L
Sbjct: 982 LLVKNLAFQVTKEELRKLFSAFGNIKSVRIPKNAYNRSRGYAFVEFMSKNECLTAIESLQ 1041
Query: 552 YKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKR 593
+ G L +++A + Q+ K + V H +K+
Sbjct: 1042 HTHLYGRHLIIDFADDFIFDQNVNEFDKLKEEGVNNNHGSKK 1083
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
++ VKNL VT++ LR FS G I ++ + +SR +AF+ F ++ E AI+
Sbjct: 981 KLLVKNLAFQVTKEELRKLFSAFGNIKSVRIPKNAYNRSRGYAFVEFMSKNECLTAIESL 1040
Query: 62 NKSYL 66
++L
Sbjct: 1041 QHTHL 1045
>gi|313212745|emb|CBY36675.1| unnamed protein product [Oikopleura dioica]
Length = 3413
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 101/164 (61%), Gaps = 7/164 (4%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
+V ++GRLF+RN+ Y TE +L++ +G ++E+ + D+ TKR KG A+V Y +PE+A
Sbjct: 136 DVADTGRLFIRNMSYLCTETDLKDLLGSYGTLTELVLPTDEVTKRPKGFAFVEYQMPENA 195
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
RA+ LD S FQGR++HV+PA KK+ + T T ++ + + A
Sbjct: 196 VRAMAELDGSSFQGRIMHVLPAVAKKNYAPR-----TDPNLNTSYKKEKMAKMKENADKE 250
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALG 457
+WNSLF+ + V + +++++ +SK ++ R+ D+AV++ALG
Sbjct: 251 DFSWNSLFVGANAVADEMSKRYELSKDSIMRRD--DVAVQLALG 292
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRICVKNL K E LR FF + G +ITD +L++ +G SR+ AFIGF ++A+ A+
Sbjct: 10 SRICVKNLTKSCDEKSLRTFFGRTGAKITDCRLLKNDEGVSRRIAFIGFARPEDAKNALN 69
Query: 60 YFNKSYLDTCRISCEIAR 77
+ + + +I E+A+
Sbjct: 70 ELDGAKVGVNKIKVELAK 87
>gi|22326619|ref|NP_196191.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332003531|gb|AED90914.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 451
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLP-KYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
S I VKNLP K+VTE+RLRD FS+KGEI D KL R DGKSRQFA+IGFRTEQEA++AI
Sbjct: 2 SWIIVKNLPSKHVTEERLRDVFSRKGEIADVKLKRKSDGKSRQFAYIGFRTEQEAQDAIT 61
Query: 60 YFNKSYLDTCRISCEIA 76
Y NK ++DT RIS E+A
Sbjct: 62 YVNKCFIDTYRISVEVA 78
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 98/445 (22%)
Query: 301 LFVRNLPYT-ATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+ V+NLP TE+ LR+ FS+ G +++V + D K S+ AY+ + + A AI
Sbjct: 4 IIVKNLPSKHVTEERLRDVFSRKGEIADVKLKRKSDGK-SRQFAYIGFRTEQEAQDAITY 62
Query: 360 LDNSIFQGRLLHV----MPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
++ + V P R + + + N+ ++G K +K++ E
Sbjct: 63 VNKCFIDTYRISVEVADPPPREEGKENTEHFSNAYAKGDKKIKKKPE------------- 109
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLD-REANDLAVRIALGETQVIAETKKALTNAGV 474
+ PD A + +K LLD ++ + V +G+ E K+ T +
Sbjct: 110 ------VSPDG-----ADEPNKAKISLLDSKKTRKIKVVALVGDDVSDMEYYKSRTKKNL 158
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVK-NLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
+ S S +T G + + HVF + ++ D + E FG D
Sbjct: 159 SDSD----SDCETYGCEDAIHVFPIDGDIEADRVDKEFTIHVFGFGHQD----------- 203
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKR 593
VVFLEP+EA A KG+ + + + AP D+L + + N+ N + V E+D +R
Sbjct: 204 -VVFLEPIEAREALKGMGVQALQRCSP-VSGAPRDILEPKALADNNE-NTSDVEENDVRR 260
Query: 594 AL-LEQQLEGVTDADIDPDRVESRSLFVKNLNFKT-------CDENLRKHFGEHIKEGRI 645
L L+QQ+ ID D E L+ F+T DE+L+KH E +K+G+I
Sbjct: 261 RLNLDQQV------GIDSDITEVCPLYDCCGRFETMYSELQDTDESLKKHLTELVKQGKI 314
Query: 646 LSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQV 705
LS K GT++DGHALIL K V
Sbjct: 315 LSFK----------------------------------GTVVDGHALILSFSKNKPSGTV 340
Query: 706 VKKAEKDKSSTKLLVRNVAFEAQRK 730
K +KD TKL V+N+AFEA K
Sbjct: 341 GKDLDKDTILTKLHVKNIAFEATMK 365
>gi|9759097|dbj|BAB09666.1| unnamed protein product [Arabidopsis thaliana]
Length = 433
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLP-KYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
S I VKNLP K+VTE+RLRD FS+KGEI D KL R DGKSRQFA+IGFRTEQEA++AI
Sbjct: 2 SWIIVKNLPSKHVTEERLRDVFSRKGEIADVKLKRKSDGKSRQFAYIGFRTEQEAQDAIT 61
Query: 60 YFNKSYLDTCRISCEIA 76
Y NK ++DT RIS E+A
Sbjct: 62 YVNKCFIDTYRISVEVA 78
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 182/448 (40%), Gaps = 122/448 (27%)
Query: 301 LFVRNLPYT-ATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+ V+NLP TE+ LR+ FS+ G +++V + D K S+ AY+ + + A AI
Sbjct: 4 IIVKNLPSKHVTEERLRDVFSRKGEIADVKLKRKSDGK-SRQFAYIGFRTEQEAQDAITY 62
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNS 419
++ + V E+ + + EE K S
Sbjct: 63 VNKCFIDTYRISV------------EVADPPPR----------EEGKVS----------- 89
Query: 420 LFMRPDTVVENIARKHGVSKSDLLD-REANDLAVRIALGETQVIAETKKALTNAGVNVSS 478
PD A + +K LLD ++ + V +G+ E K+ T ++ S
Sbjct: 90 ----PDG-----ADEPNKAKISLLDSKKTRKIKVVALVGDDVSDMEYYKSRTKKNLSDSD 140
Query: 479 LEEFSAGKTDGLKRSNHVFLVK-NLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVF 537
S +T G + + HVF + ++ D + E FG D VVF
Sbjct: 141 ----SDCETYGCEDAIHVFPIDGDIEADRVDKEFTIHVFGFGHQD------------VVF 184
Query: 538 LEPVEAAAAFKGL---AYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRA 594
LEP+EA A KG+ A +R V AP D+L + + N+ N + V E+D +R
Sbjct: 185 LEPIEAREALKGMGVQALQRCSPV----SGAPRDILEPKALADNNE-NTSDVEENDVRRR 239
Query: 595 L-LEQQLEGVTDADIDPDRVESRSLFVKNLNFKT-C----------DENLRKHFGEHIKE 642
L L+QQ+ ID D E L+ F+T C DE+L+KH E +K+
Sbjct: 240 LNLDQQV------GIDSDITEVCPLYDCCGRFETMCSSFYSELQDTDESLKKHLTELVKQ 293
Query: 643 GRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD 702
G+ILS K GT++DGHALIL K
Sbjct: 294 GKILSFK----------------------------------GTVVDGHALILSFSKNKPS 319
Query: 703 EQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
V K +KD TKL V+N+AFEA K
Sbjct: 320 GTVGKDLDKDTILTKLHVKNIAFEATMK 347
>gi|90103406|gb|ABD85547.1| KIAA0682-like [Ictalurus punctatus]
Length = 150
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 92/147 (62%), Gaps = 8/147 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP + +R R F+ G +TD L TKDGK R+F F+GF+ E++A +A+K+
Sbjct: 2 SRLIVKNLPNGMKVERFRQMFAAFGTLTDCGLKFTKDGKFRKFGFVGFKCEEDASKALKH 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAK-----RGEK 115
FNKS++DT R++ E GDPN RPWS++S ++ + ++DE+ P + + EK
Sbjct: 62 FNKSFVDTARVTVEFCTDFGDPNKARPWSKHS--RQPDRTKDEQKPEGEKRDENKGKKEK 119
Query: 116 KTIEKVTE-NDDPQLLEFLQVMQPRVK 141
K ++ + + +D L EFL V + R +
Sbjct: 120 KPLDVLGDLKNDEGLREFLAVHKNRTQ 146
>gi|385301644|gb|EIF45821.1| multiple rna-binding domain-containing protein 1 [Dekkera
bruxellensis AWRI1499]
Length = 633
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 100/164 (60%), Gaps = 15/164 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LP Y ED+LR FS+ G +TD KL+R ++G+SR+FAFIGF+T ++AE +K+
Sbjct: 2 SRVIVKGLPVYYDEDKLRKVFSEDGPVTDVKLVRKRNGQSRRFAFIGFKTMEDAERVVKF 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPW---SRYSLKKEKEVSED-------EKNPVLAA 110
+ +Y DT +++ ++A+ + DP +P W + +E+++ ED +K+ L
Sbjct: 62 RDGTYXDTAKVTVQLAKTMRDPTLPLSWRERRKQQRLQERKLEEDLKRQEELQKSVRLRK 121
Query: 111 KRGEK--KTI-EKVTENDDPQLLEFLQVMQPRVKSKMWANDTLI 151
K + KT+ EK+ N P+L E+++ + + + W ND +I
Sbjct: 122 KEQQXRNKTVDEKIKSN--PELQEYMETXKTHGEGRSWNNDEVI 163
>gi|387594566|gb|EIJ89590.1| hypothetical protein NEQG_00360 [Nematocida parisii ERTm3]
Length = 397
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 196/427 (45%), Gaps = 61/427 (14%)
Query: 277 EIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT 336
+IV+ ++ +K+ +++V+ESG +FV +PYTATE+E+ + FSK+G V+EV + + T
Sbjct: 16 DIVEKYRKTAETKN-KEKVMESGEVFVNGIPYTATEEEVEQEFSKYGMVAEVFMKYKERT 74
Query: 337 -------KRSKGIAYVLYAIPESASRAIEVLDNSI-FQGRLLHVMPARHKKSSDKQELHN 388
+ G A V Y P+ A E+L +I FQG+ + ++P+R K +
Sbjct: 75 DSWGEGQTLNTGFAIVTYTFPKDAC---EILGETILFQGKHIKILPSRGK------PVEE 125
Query: 389 STSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN 448
+T + L R +N +F V+ +++ VSK D+L
Sbjct: 126 ATDKNKSNLSHGR---------------YNPVFFNFTAVLGVASKEKKVSKRDILKDRGI 170
Query: 449 DLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKR--SNHVFLVKNLPYDS 506
+ +IAL E+++I T+ L + G++ EE + K + S LVKN+PY
Sbjct: 171 GVGGKIALLESELIERTRMFLKDEGIS----EECTCSKKPCICMFISKKSILVKNVPYGI 226
Query: 507 SEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAP 566
EGE+ + F K+ + V PS KTL ++ + +A A K + R + P+Y+E+
Sbjct: 227 REGEIREHFTKY--IRAVFSPS-KTLIILEYGNKSDAMAELKQNNFTRIRDQPIYIEYLK 283
Query: 567 SDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFK 626
+++ ++ + G A+ L +++ DP ++ L +KN+ F+
Sbjct: 284 ---VTKERYAREMAGLPPITGLKSAENELKKEKE--------DPLMLK---LILKNVPFQ 329
Query: 627 TCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTI 686
L + I L + +K GF F+E S + A + R L+
Sbjct: 330 AGRGELSELLTGLIGTDYTLRMPLK-----ADGTHRGFCFVEMQSSDAANTLLRKLKHVH 384
Query: 687 LDGHALI 693
L G ++
Sbjct: 385 LYGRHIV 391
>gi|390332535|ref|XP_001184447.2| PREDICTED: probable RNA-binding protein 19-like [Strongylocentrotus
purpuratus]
Length = 513
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 96/156 (61%), Gaps = 16/156 (10%)
Query: 12 VTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRI 71
+ E++LR+ F+ +G++TD +L TK G R+FAFIGF+TE EA+ A+ +FNKSY+D+ RI
Sbjct: 56 IKEEKLRNTFASRGDVTDIQLKFTKGGVFRKFAFIGFKTEVEAQNAVDFFNKSYVDSSRI 115
Query: 72 SCEIARKVGDPNMPRPWSRYSLK----------KEKEVSEDEKNP-----VLAAKRGEKK 116
E+A+ +GD N+ RPWS+YS K KE++ S D+K L K+ +KK
Sbjct: 116 QVELAKNLGDANLDRPWSKYSEKSSAFQKKQKAKEEKESTDDKKTTATQDTLTKKKKKKK 175
Query: 117 TIEKVTE-NDDPQLLEFLQVMQPRVKSKMWANDTLI 151
+E + + DDP+ EFL+ + +W ND I
Sbjct: 176 GLEGLGDLEDDPKFQEFLEAHNVKTAKGIWDNDAGI 211
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 323 GNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQ 366
G ++EV++ +D TK+ KG A+V + +PE A RA LD + FQ
Sbjct: 467 GPLTEVNLPIDTFTKKIKGFAFVTFMMPEHAVRAYTELDGTSFQ 510
>gi|281201992|gb|EFA76199.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 874
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 96/164 (58%), Gaps = 20/164 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+R+C+K LPK++TE RL+D F + G +TD K+M+++DGKSR F FIGF +E A++A+
Sbjct: 3 TRVCIKQLPKHLTEKRLKDHFERFGTVTDCKIMKSRDGKSRMFGFIGFSSESAAKQAL-V 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS-----------LKKEKEVSEDEKNPVLA 109
N +YLDT +I E A V ++ RPWS+YS L+K+K+++E +K
Sbjct: 62 LNNTYLDTSKIIVEKA--VDSESVSRPWSKYSAGSSAFNKAQELEKQKQLTEQQKKKDAE 119
Query: 110 AKRGEKK-----TIEKVTENDDPQLLEFLQVMQPRVKSKMWAND 148
K K+ + + +DP+ EF + M R + W+N+
Sbjct: 120 EKLKNKRKGVGGDGDDDIDENDPEYQEF-KRMHQRTQRNNWSNN 162
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+FVKNLNF T E LR+ F + I++ ++V K H K G+ +S G+GF EF + + A
Sbjct: 672 VFVKNLNFDTTSETLRERF-KSIRDFISVNVATKLHHKTGEKLSHGYGFAEFGTKQGAYE 730
Query: 678 VCRDLQGTILDGHALILQL---CHAKKDEQVVKKAEKDKS-----STKLLVRNVAFEA 727
+ +DGH ++L+L A K+ K D + STK+ V+N+ FEA
Sbjct: 731 CIKKWHNATVDGHEIVLKLSDKASATKELPANAKRSIDPTPANVVSTKISVKNIPFEA 788
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I VKN+P + +R F+ GE+ ++ + G R F F+ + TEQEA+ A+
Sbjct: 777 TKISVKNIPFEASPAEVRKLFATYGELQSVRIPKKPTGGHRGFGFVQYLTEQEAKNAMDA 836
Query: 61 FNKSYLDTCRISCEIA 76
S+L + E A
Sbjct: 837 LRNSHLYGRHLVLEFA 852
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
P N S V+ S ++ V+N+P+ A+ E+R+ F+ +G + V I K T +
Sbjct: 760 PANAKRSIDPTPANVV-STKISVKNIPFEASPAEVRKLFATYGELQSVRI-PKKPTGGHR 817
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLL 370
G +V Y + A A++ L NS GR L
Sbjct: 818 GFGFVQYLTEQEAKNAMDALRNSHLYGRHL 847
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 607 DIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGF 666
D P V S + VKN+ F+ +RK F + G + SV++ K G GFGF
Sbjct: 768 DPTPANVVSTKISVKNIPFEASPAEVRKLFATY---GELQSVRIPKKPTGGHR---GFGF 821
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD-EQVVKKA 709
+++ + + A N L+ + L G L+L+ K+ +Q+ +KA
Sbjct: 822 VQYLTEQEAKNAMDALRNSHLYGRHLVLEFAELDKNIDQLRQKA 865
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 499 VKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-----LALVVFLEPVEAAAAFKGLAYK 553
VKN+P+++S E+ K+F +G L V +P T V +L EA A L
Sbjct: 781 VKNIPFEASPAEVRKLFATYGELQSVRIPKKPTGGHRGFGFVQYLTEQEAKNAMDALRNS 840
Query: 554 RYKGVPLYLEWAP----SDVLSQSSTSKGNQ 580
G L LE+A D L Q +T + N+
Sbjct: 841 HLYGRHLVLEFAELDKNIDQLRQKATEEYNK 871
>gi|387596588|gb|EIJ94209.1| hypothetical protein NEPG_00876 [Nematocida parisii ERTm1]
Length = 364
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 183/408 (44%), Gaps = 60/408 (14%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT-------KRSKGIAYVLYA 348
+ESG +FV +PYTATE+E+ + FSK+G V+EV + + T + G A V Y
Sbjct: 1 MESGEVFVNGIPYTATEEEVEQEFSKYGMVAEVFMKYKERTDSWGEGQTLNTGFAIVTYT 60
Query: 349 IPESASRAIEVLDNSI-FQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKA 407
P+ A E+L +I FQG+ + ++P+R K + +T + L R
Sbjct: 61 FPKDAC---EILGETILFQGKHIKILPSRGKP------VEEATDKNKSNLSHGR------ 105
Query: 408 SEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKK 467
+N +F V+ +++ VSK D+L + +IAL E+++I T+
Sbjct: 106 ---------YNPVFFNFTAVLGVASKEKKVSKRDILKDRGIGVGGKIALLESELIERTRM 156
Query: 468 ALTNAGVNVSSLEEFSAGKTDGLKR--SNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVI 525
L + G++ EE + K + S LVKN+PY EGE+ + F K+ + V
Sbjct: 157 FLKDEGIS----EECTCSKKPCICMFISKKSILVKNVPYGIREGEIREHFTKY--IRAVF 210
Query: 526 LPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAV 585
PS KTL ++ + +A A K + R + P+Y+E+ +++ ++ +
Sbjct: 211 SPS-KTLIILEYGNKSDAMAELKQNNFTRIRDQPIYIEYLK---VTKERYAREMAGLPPI 266
Query: 586 VGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRI 645
G A+ L +++ DP ++ L +KN+ F+ L + I
Sbjct: 267 TGLKSAENELKKEKE--------DPLMLK---LILKNVPFQAGRGELSELLTGLIGTDYT 315
Query: 646 LSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALI 693
L + +K GF F+E S + A + R L+ L G ++
Sbjct: 316 LRMPLK-----ADGTHRGFCFVEMQSSDAANTLLRKLKHVHLYGRHIV 358
>gi|302843097|ref|XP_002953091.1| hypothetical protein VOLCADRAFT_63158 [Volvox carteri f.
nagariensis]
gi|300261802|gb|EFJ46013.1| hypothetical protein VOLCADRAFT_63158 [Volvox carteri f.
nagariensis]
Length = 762
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 74/116 (63%), Gaps = 6/116 (5%)
Query: 37 DGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDTCRISCEIARKVGDPNMPRPWSRYS--LK 94
DG+SRQ FIGF++ EA A++Y+N+SY+DT +++ E ARKVGD +PR WS+++
Sbjct: 1 DGRSRQLGFIGFKSVDEAAAALRYYNRSYMDTAKLAVEFARKVGDEQLPRAWSKHTSGTT 60
Query: 95 KEKEVSEDEKNPVLAAKRGEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTL 150
++++ A G+ + +DP+L EFL +MQPR K+++WAND +
Sbjct: 61 ANRKLTTPAGAARPGAANGKAED----GGGEDPKLREFLALMQPRSKARIWANDEM 112
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+NL T+ ++ F+ G + +L + DG R FAF+ F T+QEA+ A++
Sbjct: 652 TKLVVRNLAFEATKKDIQGLFNPFGHLKSCRLPKKFDGSHRGFAFVEFVTKQEAKNALEG 711
Query: 61 FNKSYLDTCRISCEIAR 77
++L R+ E AR
Sbjct: 712 LAGTHLYGRRLVVEYAR 728
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L VRNL + AT+ +++ F+ FG++ + D +G A+V + + A A+
Sbjct: 651 STKLVVRNLAFEATKKDIQGLFNPFGHLKSCRLPKKFDGSH-RGFAFVEFVTKQEAKNAL 709
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
E L + GR L V AR + D ++ N T+
Sbjct: 710 EGLAGTHLYGRRLVVEYAREDDTLD--DIRNKTA 741
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
+V+NL +++++ ++ +F FG L LP S + A V F+ EA A +GLA
Sbjct: 654 LVVRNLAFEATKKDIQGLFNPFGHLKSCRLPKKFDGSHRGFAFVEFVTKQEAKNALEGLA 713
Query: 552 YKRYKGVPLYLEWAPS----DVLSQSSTSKGNQKNDAVVGEHDAKR 593
G L +E+A D + + +K + + V G+ AKR
Sbjct: 714 GTHLYGRRLVVEYAREDDTLDDIRNKTAAKFKRDGELVAGDAPAKR 759
>gi|358340327|dbj|GAA48246.1| multiple RNA-binding domain-containing protein 1, partial
[Clonorchis sinensis]
Length = 518
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 119/247 (48%), Gaps = 41/247 (16%)
Query: 367 GRLLHVMPAR---HKKSSDKQELHNSTSQGTKT----LKQRREEERKASEASGNTKAWNS 419
GRLLH++P KK S++ + ++ K + R +E KAS +G WN+
Sbjct: 1 GRLLHILPGEDPPEKKPSEQGRAEDRDNRQKKNHLSEFQTTRLQELKAS--AGTAHNWNT 58
Query: 420 LFMRPDTVVENIARKHGVSKSDLLD-REANDLAVRIALGETQVIAETKKALTNAGVNVSS 478
LF+RPD V +A K G++K +L+ E +AVR+A E Q+++E ++ L GVN+ +
Sbjct: 59 LFIRPDAVATYLAAKFGLTKEQVLEPSERGSVAVRLAHAEAQLVSEMREFLEKHGVNLDA 118
Query: 479 L------EEFSAGKTDGL---------KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDK 523
E+ +G+ D L + S FL+KNLP ++ E+ ++ ++ +
Sbjct: 119 FDDPESSEKLQSGRRDRLEAKAAGTLRQLSGTAFLIKNLPAGTTAVEVRELLNRYSKSAR 178
Query: 524 ----------------VILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPS 567
VI+P A+V F P +A ++ LAY+ Y+ LYL+W P
Sbjct: 179 PEDSQTLTTSRIRPKSVIVPPLGITAIVEFSLPQQARLMYRYLAYEPYRDSILYLQWLPE 238
Query: 568 DVLSQSS 574
L S
Sbjct: 239 GALKDRS 245
>gi|160331548|ref|XP_001712481.1| pab2 [Hemiselmis andersenii]
gi|159765929|gb|ABW98156.1| pab2 [Hemiselmis andersenii]
Length = 524
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 191/441 (43%), Gaps = 64/441 (14%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E+G L ++NLP+ E E+R+ F FG ++++ + + +V + +PE A +
Sbjct: 106 IETGILLIKNLPHQIPELEIRKLFLPFGFITDIFKKRKILNENNSFQVFVEFGLPECAIK 165
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
A LD I++GR++H++P + K K+E + E+R + E +
Sbjct: 166 AASFLDGKIYRGRIIHILPFQKKNFFSKKE-EREVFFLKFKKFKEEVEKRNSIEQ----R 220
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDL-AVRIALGETQVIAETKKALTNAGV 474
+W +LF+ D +++ ++ K+G SK ++ E L +++L E ++ E L G+
Sbjct: 221 SWYTLFIPQDKIIKILSLKYGKSKKISINYEKFHLDLTKLSLSEARIQNEISLFLKYFGI 280
Query: 475 NVSSLE-EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLA 533
N+++ EF K+S ++KN + K+ KFG + + IL
Sbjct: 281 NLNAFNPEFIH------KKSRRTLILKNF-FSGENFNFQKLLKKFGKITQFILLPVIKFV 333
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKR 593
LV + + A AF +++ + +EWAP + L K H+
Sbjct: 334 LVEYQKKKSANEAFSYFQKQKH----IIIEWAPLNSLISRKKPIIKNKKKKNDPNHE--N 387
Query: 594 ALLEQQLEGVTDADIDPD-RVESRSLFVKNLN----FKTCD--------------ENLRK 634
+L + + ++P+ ++ ++S F +NLN F T + EN +
Sbjct: 388 FIL---FKKKKKSFLNPNGKLANKSFFSQNLNENPKFSTKNFLRSNPKKKNKLFMENSKL 444
Query: 635 H---------FGEHIKE--------GRILSVKV-KKHLKNGKNVSMGFGFIEFDSVETAT 676
H F +KE G+ILSV++ KK K K GF FIEF+ +E A
Sbjct: 445 HGKILIRNIPFEIQLKELKKIYENFGKILSVRLPKKTPKQHK----GFAFIEFEKIEEAK 500
Query: 677 NVCRDLQGTILDGHALILQLC 697
Q L L + L
Sbjct: 501 KAVLSTQNVHLFSRHLCVNLL 521
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGF 48
SRI ++NLP + T++ L FS G+ITD KL++ GK + FIGF
Sbjct: 2 SRIFLQNLPSWTTKEILNTKFSCFGKITDIKLIKNVSGKGKMCGFIGF 49
>gi|378756564|gb|EHY66588.1| hypothetical protein NERG_00228, partial [Nematocida sp. 1 ERTm2]
Length = 398
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 180/415 (43%), Gaps = 66/415 (15%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD--KDT-----KRSKGIAY 344
+++VLE+G +FV +PYTATE+E+ + F ++G +SEV + +DT + G A
Sbjct: 31 KEKVLETGEIFVNGIPYTATEEEVEKAFQEYGMISEVFMKYKEREDTWGEGQTLNTGFAI 90
Query: 345 VLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEE 404
V + P+ A + + + +FQG+ + ++P+R K EE
Sbjct: 91 VTFTFPKDAYKLVG--ETIMFQGKNIKILPSRGKPV---------------------EEV 127
Query: 405 RKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAE 464
++++ + +N +F ++ +++ VSK D+L L RIAL E+++I
Sbjct: 128 TDKNKSNASHGRYNPVFFNFSAILGVASKEKKVSKQDILKDRGIGLGGRIALLESELIER 187
Query: 465 TKKALTNAGVNVSSLEEFSAGKTDGLKR--SNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
T+ L + G++ EE K + S L+KN+PY EGE+ + F K+ +
Sbjct: 188 TRLFLKDEGIS----EECVCSKKPCVCMFVSKKSILIKNIPYGIKEGEIREYFKKY--IR 241
Query: 523 KVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN 582
V PS KTL ++ + +AA K + R + P+Y+E+
Sbjct: 242 AVFSPS-KTLLILEYTTKSDAATELKANNFTRVRDQPIYIEYL----------------- 283
Query: 583 DAVVGEHDAKRALLEQQLEGVTDADI----DPDRVESRSLFVKNLNFKTCDENLRKHFGE 638
V E A+ + + AD + D + +KN+ F+ L +
Sbjct: 284 -KVTKERYAREMAGLPPVSSLKSADSELKREADNPHMLKIILKNVPFQAGRSELSELITG 342
Query: 639 HIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALI 693
I + L + VK GF F+E S E A + + L+ L G ++
Sbjct: 343 LIGKEYTLRMPVK-----SDGTHRGFCFVEMQSSEAANILLKKLRHVHLYGRHIV 392
>gi|170048416|ref|XP_001852664.1| multiple RNA-binding domain-containing protein 1 [Culex
quinquefasciatus]
gi|167870542|gb|EDS33925.1| multiple RNA-binding domain-containing protein 1 [Culex
quinquefasciatus]
Length = 302
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 21/208 (10%)
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL---------SQSSTSKGNQKND 583
A++ FL+P EA AFK LAY R+K +PLYLEWAP + + S +K + K D
Sbjct: 3 AIIEFLDPSEAKKAFKKLAYTRFKSLPLYLEWAPENTFATEESRKNAAMSEETKKSSKTD 62
Query: 584 AVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEG 643
A E + + + Q+ E +LF+KNL+F+T ++ +R F H+ G
Sbjct: 63 AQTLEKEEEIPVKRQEEPEDDREP-----EEGTTLFIKNLSFQTREDAIRDTF-RHV--G 114
Query: 644 RILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC--HAKK 701
I SV+V + +N S G+GF++F ++A +++Q +DG + L
Sbjct: 115 PIHSVQVVRRKDGERNESRGYGFVQFKLRKSADTALKNMQSVRIDGRQVELSRSDRTLNT 174
Query: 702 DEQVVKKAEKDK--SSTKLLVRNVAFEA 727
D +KA K K + TK+LVRNV F+A
Sbjct: 175 DAAGGRKATKVKKQTGTKILVRNVPFQA 202
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR--SKGIAYVLYAIPESASRAIE 358
LF++NL + ED +R+ F G + V +V KD +R S+G +V + + +SA A++
Sbjct: 92 LFIKNLSFQTREDAIRDTFRHVGPIHSVQVVRRKDGERNESRGYGFVQFKLRKSADTALK 151
Query: 359 VLDNSIFQGRLLHV 372
+ + GR + +
Sbjct: 152 NMQSVRIDGRQVEL 165
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDG---KSRQFAFIGFRTEQEAEEAIK 59
+ +KNL ED +RD F G I +++R KDG +SR + F+ F+ + A+ A+K
Sbjct: 92 LFIKNLSFQTREDAIRDTFRHVGPIHSVQVVRRKDGERNESRGYGFVQFKLRKSADTALK 151
Query: 60 YFNKSYLD 67
+D
Sbjct: 152 NMQSVRID 159
>gi|735966|emb|CAA56649.1| surface antigen [Entamoeba histolytica]
Length = 294
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 24/172 (13%)
Query: 236 DDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEV 295
DD +++ + E+D N EE + +I + H S ++ +
Sbjct: 141 DDGKKKKTDSEDDQNNQQMEEDEEMINEQEHQ------------------KSMDEIDVKD 182
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
E GR+++ NLP+ TEDE R+ F +FGN++E+H+ +DK TK+SKG VL+ +P+ A +
Sbjct: 183 WEEGRIYITNLPFNCTEDEFRKEFDRFGNIAEIHLPIDKITKKSKGFGKVLFVVPQDAVK 242
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKA 407
A +DN +GR++HV A+ S +Q + +K K+++ E KA
Sbjct: 243 ACNEMDNKFIKGRIVHVTYAKADPYSSQQ------TGESKNYKEKKPNELKA 288
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI +KNLP+ E L+ F + G ITD K+MRT G SR+F FIGF E +A+ AI
Sbjct: 2 SRIIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQGVSRKFGFIGFENEDQAQTAITK 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
N +Y+ + ++ +A+ +GD + RPWS+YS+ S D+K ++ K E TI+K
Sbjct: 62 MNGAYIQSSKLQVSLAKAIGDQTIERPWSKYSV-GSSSFSNDKKRKIIPTKH-ETPTIKK 119
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 127/299 (42%), Gaps = 40/299 (13%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ ++NLP A E L++ F KFG +++ V+ S+ ++ + + A AI
Sbjct: 3 RIIIKNLPERADEKILKQQFEKFGGITDCK-VMRTPQGVSRKFGFIGFENEDQAQTAITK 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNS 419
++ + Q L V A+ + G +T+++ + S + N K
Sbjct: 62 MNGAYIQSSKLQVSLAK--------------AIGDQTIERPWSKYSVGSSSFSNDKKRKI 107
Query: 420 LFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI----------AETKKAL 469
+ + +T I +K S D L + AN+ ++ G+ + E + +
Sbjct: 108 IPTKHETPT--IKKKKVSSSLDELKKIANERRPKLDDGKKKKTDSEDDQNNQQMEEDEEM 165
Query: 470 TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-- 527
N + S++E + +++ NLP++ +E E K F +FG++ ++ LP
Sbjct: 166 INEQEHQKSMDEIDVKDWE----EGRIYIT-NLPFNCTEDEFRKEFDRFGNIAEIHLPID 220
Query: 528 ----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN 582
+K V+F+ P +A A + K KG +++ +A +D S T G KN
Sbjct: 221 KITKKSKGFGKVLFVVPQDAVKACNEMDNKFIKGRIVHVTYAKADPYSSQQT--GESKN 277
>gi|452936|gb|AAB28794.1| 60 kda non-pathogenic specific antigen [Entamoeba histolytica, SAW
1734R, Peptide Partial, 273 aa]
Length = 273
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 78/141 (55%), Gaps = 18/141 (12%)
Query: 236 DDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEV 295
DD +++ + E+D N EE + +I + H S ++ +
Sbjct: 136 DDGKKKKTDSEDDQNNQQMEEDEEMINEQEHQ------------------KSMDEIDVKD 177
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
E GR+++ NLP+ TEDE R+ F +FGN++E+H+ +DK TK+SKG VL+ +P+ A +
Sbjct: 178 WEEGRIYITNLPFNCTEDEFRKEFDRFGNIAEIHLPIDKITKKSKGFGKVLFVVPQDAVK 237
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
A +DN +GR++HV A+
Sbjct: 238 ACNEMDNKFIKGRIVHVTYAK 258
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 2/116 (1%)
Query: 5 VKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKS 64
+KNLP+ E L+ F + G ITD K+MRT G SR+F FIGF E +A+ AI N +
Sbjct: 1 IKNLPERADEKILKQQFEKFGGITDCKVMRTPQGVSRKFGFIGFENEDQAQTAITKMNGA 60
Query: 65 YLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
Y+ + ++ +A+ +GD + RPWS+YS+ S D+K ++ K E TI+K
Sbjct: 61 YIQSSKLQVSLAKAIGDQTIERPWSKYSV-GSSSFSNDKKRKIIPTKH-ETPTIKK 114
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 125/296 (42%), Gaps = 40/296 (13%)
Query: 303 VRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDN 362
++NLP A E L++ F KFG +++ V+ S+ ++ + + A AI ++
Sbjct: 1 IKNLPERADEKILKQQFEKFGGITDCK-VMRTPQGVSRKFGFIGFENEDQAQTAITKMNG 59
Query: 363 SIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFM 422
+ Q L V A+ + G +T+++ + S + N K +
Sbjct: 60 AYIQSSKLQVSLAK--------------AIGDQTIERPWSKYSVGSSSFSNDKKRKIIPT 105
Query: 423 RPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI----------AETKKALTNA 472
+ +T I +K S D L + AN+ ++ G+ + E + + N
Sbjct: 106 KHETPT--IKKKKVSSSLDELKKIANERRPKLDDGKKKKTDSEDDQNNQQMEEDEEMINE 163
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP----- 527
+ S++E + +++ NLP++ +E E K F +FG++ ++ LP
Sbjct: 164 QEHQKSMDEIDVKDWE----EGRIYIT-NLPFNCTEDEFRKEFDRFGNIAEIHLPIDKIT 218
Query: 528 -STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN 582
+K V+F+ P +A A + K KG +++ +A + +S T G KN
Sbjct: 219 KKSKGFGKVLFVVPQDAVKACNEMDNKFIKGRIVHVTYAKASPISCQQT--GESKN 272
>gi|76156231|gb|AAX27453.2| SJCHGC02231 protein [Schistosoma japonicum]
Length = 216
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
P +S++ +LE+GRLFVRNLPY TE+EL + FS +G +S++H+ D ++ SKG A
Sbjct: 93 PVKTSEETVSAILETGRLFVRNLPYDCTENELEKLFSPYGPLSDIHLAFDSWSQVSKGFA 152
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSD---KQELHNS 389
+V Y P A +A + LD + F RL+H++P + S+ ++ L+NS
Sbjct: 153 FVTYLFPSDAVKAYKSLDKTKFMDRLIHILPGQEHTESNHSFRKSLNNS 201
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP------STKTLALVVFLEPVEAAAAFKGL 550
V+NLPYD +E EL K+F +G L + L +K A V +L P +A A+K L
Sbjct: 110 LFVRNLPYDCTENELEKLFSPYGPLSDIHLAFDSWSQVSKGFAFVTYLFPSDAVKAYKSL 169
>gi|124805915|ref|XP_001350574.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23496698|gb|AAN36254.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 1119
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 126/284 (44%), Gaps = 55/284 (19%)
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQE---------LHNSTSQG 393
A+V + P S +A LDN I++G++L ++ KK ++ +E + S
Sbjct: 498 AFVNFMFPSSCEKAKIHLDNKIYRGKILIAKYSKEKKITNYEENIENINEKNIFIKLSND 557
Query: 394 TKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVR 453
KT ++ E +K ++ N WN L+ +T + N +++ S +L+ + ++AV
Sbjct: 558 CKTSYKKIVEIQKK-KSCQNENMWNILYTDINTSINNFCKENNCSVESVLNIKDKNIAVN 616
Query: 454 IALGETQVIAETKKALTNAGVNVSSLEEF------------------------------- 482
++L ET +I + K + N G+ + + E+
Sbjct: 617 VSLTETYIINKIKTWIKNEGIYLDAFEQIYVKKKKNEDEKDITKINSNNKNENIEKNNND 676
Query: 483 -------SAGKTD-------GLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS 528
++ + D +RS+ ++KNL +++ ++ +F ++G L +V
Sbjct: 677 NNNNNNNTSNEVDKDDKEIVKYRRSDDTIIIKNLSIYTNQNDIINLFKQYGILKRVSFSP 736
Query: 529 TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ 572
+ ++ + A AF +Y RYK +PLYLEWAP ++ ++
Sbjct: 737 YNNICIIQYENADNAKKAFISNSYIRYKKLPLYLEWAPLNLFAK 780
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 28/138 (20%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILS--VKVKK----------HLKNGKN-VSMG 663
S+++KN+NF T +E+L+ F + EG I VK KK + N N VS G
Sbjct: 862 SIYIKNINFNTKEEDLKNLFDKM--EGFITCNIVKSKKVILQKDKESNKISNQYNTVSSG 919
Query: 664 FGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK------------KDEQVVKKAEK 711
+GF EF + E A + L GT L+ H L + L H + +DE++V K +K
Sbjct: 920 YGFAEFKNKELAMEAIKRLTGTRLNDHLLEMSLSHNRIRKKKNINQKKNEDEKLVLKNKK 979
Query: 712 DKSSTKLLVRNVAFEAQR 729
+ + KL+V+N+AF+ +
Sbjct: 980 -QVTKKLVVKNLAFQVNK 996
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ +L V+NL + ++ELR+ FS FGNV V I + RS+G A++ + + + AI
Sbjct: 982 TKKLVVKNLAFQVNKEELRKLFSAFGNVKSVRIPKNV-YNRSRGYAFIEFMSKKESCNAI 1040
Query: 358 EVLDNSIFQGRLL 370
E L ++ GR L
Sbjct: 1041 ESLQHTHLYGRHL 1053
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
++ L VKNL F+ E LRK F G + SV++ K++ N S G+ FIEF S +
Sbjct: 982 TKKLVVKNLAFQVNKEELRKLFSAF---GNVKSVRIPKNVYNR---SRGYAFIEFMSKKE 1035
Query: 675 ATNVCRDLQGTILDGHALILQL 696
+ N LQ T L G LI+
Sbjct: 1036 SCNAIESLQHTHLYGRHLIIDF 1057
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 1 SRICVKNLPKYVTE-DRLRDFFSQKG-----EITDAKLMRTKDG-------KSRQFAFIG 47
+R+ +KN+PKY+ E D + FF K +ITD K+M+ K +SR+ FIG
Sbjct: 45 TRLIIKNIPKYMNEIDLKKHFFKMKDHNINFQITDIKIMKRKKIIKNKEHYESRRICFIG 104
Query: 48 FRTEQEAEEAIKYFNKSYLDTCRISCEIA 76
F + K+FN +Y++T +I E A
Sbjct: 105 FLNNYHCQCFKKFFNNTYINTSKIIIEDA 133
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLA 551
+VKNL + ++ EL K+F FG++ V +P ++ A + F+ E+ A + L
Sbjct: 985 LVVKNLAFQVNKEELRKLFSAFGNVKSVRIPKNVYNRSRGYAFIEFMSKKESCNAIESLQ 1044
Query: 552 YKRYKGVPLYLEWAPSDVLSQSSTSK------GNQKNDAVVGEHDAKR-ALLEQQ 599
+ G L +++A + ++ NQ+N ++ AKR ++ E Q
Sbjct: 1045 HTHLYGRHLIIDFADDFMFDKNVDEYDKLKELNNQQNKDIITSEQAKRKSIYESQ 1099
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
++ VKNL V ++ LR FS G + ++ + +SR +AFI F +++E+ AI+
Sbjct: 984 KLVVKNLAFQVNKEELRKLFSAFGNVKSVRIPKNVYNRSRGYAFIEFMSKKESCNAIESL 1043
Query: 62 NKSYL 66
++L
Sbjct: 1044 QHTHL 1048
>gi|384486188|gb|EIE78368.1| hypothetical protein RO3G_03072 [Rhizopus delemar RA 99-880]
Length = 499
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 194/438 (44%), Gaps = 82/438 (18%)
Query: 286 SSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYV 345
SS+ + L S L+V L + TE L E F+ G VS + + D T+RS G AYV
Sbjct: 15 SSTSAPESAPLASASLYVGELDPSVTEAMLFEMFNIIGPVSSIRVCRDAVTRRSLGYAYV 74
Query: 346 LYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHK------------KSSDKQELHN 388
+ A RA+E L+ S+ +GR +M P+ K S D + LH+
Sbjct: 75 NFHRMADAERALETLNYSMIKGRSCRIMWSQRDPSLRKGNNGNIFIKNLDPSIDHKALHD 134
Query: 389 STSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN 448
+ S L + A + GN+K + F+ +T+ EA
Sbjct: 135 TFSAFGNILSCK-----IAHDEQGNSKGYG--FVHYETL------------------EAA 169
Query: 449 DLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSE 508
+ A++ G ++ +K G ++S E S ++ +N VKN+P+D ++
Sbjct: 170 ESAIKSVNG---MLLNDRKVFV--GHHISRKERESKLGESRVQFTN--IYVKNIPFDVTD 222
Query: 509 GELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLE 563
EL+++FGK+G++ ++ ++K V F + +A A L K ++G LY+
Sbjct: 223 EELSQLFGKYGTITSCVITRDDDGTSKGFGFVNFEKHQDAQNAVDDLHKKDFRGQDLYV- 281
Query: 564 WAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNL 623
S+ +KN+ E + +R E +LE ++ + + +L+VKNL
Sbjct: 282 ------------SRAQKKNER---EEELRRQYEEAKLEKMS-------KYQGVNLYVKNL 319
Query: 624 NFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQ 683
+ D+ LR F + G I S K+ + K N+S GFGF+ F S E AT ++
Sbjct: 320 DDDMDDDRLRDEFSVY---GVITSAKIMRDEKT--NISRGFGFVCFTSPEDATRAVTEMN 374
Query: 684 GTILDGHALILQLCHAKK 701
G I+ + + + K+
Sbjct: 375 GRIIGSKPIYVAIAQRKE 392
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ I VKN+P VT++ L F + G IT + R DG S+ F F+ F Q+A+ A+
Sbjct: 209 TNIYVKNIPFDVTDEELSQLFGKYGTITSCVITRDDDGTSKGFGFVNFEKHQDAQNAV 266
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
RV+ +++VKN+ F DE L + FG++ G I S + + + S GFGF+ F+
Sbjct: 205 RVQFTNIYVKNIPFDVTDEELSQLFGKY---GTITSCVITR---DDDGTSKGFGFVNFEK 258
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAK--KDEQVVKKAEKDK 713
+ A N DL G L + K ++E++ ++ E+ K
Sbjct: 259 HQDAQNAVDDLHKKDFRGQDLYVSRAQKKNEREEELRRQYEEAK 302
>gi|255549774|ref|XP_002515938.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223544843|gb|EEF46358.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 608
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 177/417 (42%), Gaps = 64/417 (15%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L TE LR FS G + VH+ T RS YV + P A +A+ L
Sbjct: 21 LYVGDLDPEVTEMNLRTVFSSMGPIRNVHLCRCSLTGRSLCYGYVNFYRPYDAYKALSNL 80
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+++ +G+L+ +M + + K + N K +AS ++ SL
Sbjct: 81 NHTYLKGKLMRIMWCQRNPCARKSGIGNLYV--------------KNLDASIDSAGLQSL 126
Query: 421 FMRPDTVVE-NIARKHGVSKSD---LLDREANDLAVRIALGETQVIAETKKALTNAGVNV 476
F + T++ + +HG SK D E + LA R AL +T + + KK + V
Sbjct: 127 FSKFGTILSCKVVEEHGKSKGYGFVQFDSEDSALAARTALHDTML--KEKKLYVSRFVKK 184
Query: 477 SSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKT 531
S E +A D LK +N VKNL D ++ MF FG + ++ ++
Sbjct: 185 S--ERTTATSYDELKFTN--LYVKNLSKDMTQDAFHNMFSAFGEIISAVIMQDHNGKSRG 240
Query: 532 LALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDA 591
V F P +A A L G L + VG A
Sbjct: 241 FGFVDFESPEDAKKAVDAL-----NGYQL-------------------ESRTLFVGRAQA 276
Query: 592 K---RALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSV 648
K + +L+ + + + + + ++ ++ +L+VKNL ++ L++ F G+I+S
Sbjct: 277 KAERKKILQHEYKDIFNTHM--EKFKASNLYVKNLALCIDNDKLQELFS---CSGKIVSA 331
Query: 649 KVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQV 705
KV ++ NG S GFGF+ F S E A L G + G +L + + K+D Q+
Sbjct: 332 KVMRY-DNG--ASRGFGFVCFSSPEEAKKALNALNGAVFQGKSLYVAMAQCKRDRQL 385
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S + VKNL + D+L++ FS G+I AK+MR +G SR F F+ F + +EA++A+
Sbjct: 302 SNLYVKNLALCIDNDKLQELFSCSGKIVSAKVMRYDNGASRGFGFVCFSSPEEAKKALNA 361
Query: 61 FN 62
N
Sbjct: 362 LN 363
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 290 DVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAI 349
+ E ++ L+V+NL D+L+E FS G + V+ D S+G +V ++
Sbjct: 293 NTHMEKFKASNLYVKNLALCIDNDKLQELFSCSGKIVSAK-VMRYDNGASRGFGFVCFSS 351
Query: 350 PESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQ 384
PE A +A+ L+ ++FQG+ L+V A+ K+ D+Q
Sbjct: 352 PEEAKKALNALNGAVFQGKSLYVAMAQCKR--DRQ 384
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL K +T+D + FS GEI A +M+ +GKSR F F+ F + ++A++A+
Sbjct: 199 TNLYVKNLSKDMTQDAFHNMFSAFGEIISAVIMQDHNGKSRGFGFVDFESPEDAKKAVDA 258
Query: 61 FNKSYLDT 68
N L++
Sbjct: 259 LNGYQLES 266
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L+ L+V+NL T+D FS FG + I+ D + K S+G +V + PE A +
Sbjct: 196 LKFTNLYVKNLSKDMTQDAFHNMFSAFGEIISAVIMQDHNGK-SRGFGFVDFESPEDAKK 254
Query: 356 AIEVLDNSIFQGRLLHVMPARHK 378
A++ L+ + R L V A+ K
Sbjct: 255 AVDALNGYQLESRTLFVGRAQAK 277
>gi|392342949|ref|XP_003754747.1| PREDICTED: probable RNA-binding protein 19, partial [Rattus
norvegicus]
Length = 128
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 84/134 (62%), Gaps = 8/134 (5%)
Query: 349 IPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKAS 408
PE A +A +D +FQGR+LHV+P+ KK ++++ + + G+ + K+++E KA+
Sbjct: 2 FPEHAVKAYAEVDGQVFQGRMLHVLPSTIKKEANQE----ANAPGS-SYKKKKEAMDKAN 56
Query: 409 EASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREA-NDLAVRIALGETQVIAETKK 467
+S + WN+LFM P+ V + IA+K+ +KS + D E +AVR+ALGETQ++ E +
Sbjct: 57 SSSSHN--WNTLFMGPNAVADAIAQKYNATKSQVFDHETKGSVAVRMALGETQLVQEVRS 114
Query: 468 ALTNAGVNVSSLEE 481
L + GV + S +
Sbjct: 115 FLIDNGVCLDSFSQ 128
>gi|297847300|ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 182/432 (42%), Gaps = 85/432 (19%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L T T+ +L E FS+ G V V + D T+RS G YV YA P+ ASRA+ L
Sbjct: 41 LYVGDLDATVTDSQLFEAFSQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNEL 100
Query: 361 DNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ GR + VM P+ K KS D + LH + S L
Sbjct: 101 NFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSC---- 156
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIA 463
+ A + SG +K + F++ DT D + A D + L + QV
Sbjct: 157 -KVAVDPSGQSKGYG--FVQYDT--------------DEAAQRAIDKLNGMLLNDKQVY- 198
Query: 464 ETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDK 523
G V L+ +G+ +K +N VKNL S+ EL K+FG+FG
Sbjct: 199 --------VGPFVHKLQRDPSGEK--VKFTN--VYVKNLSESLSDEELNKVFGEFGVTTS 246
Query: 524 VIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKG 578
++ +K V F +AA A L K + EW K
Sbjct: 247 CVIMRDGEGKSKGFGFVNFENSDDAARAVDALNGKTFDDK----EWF---------VGKA 293
Query: 579 NQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE 638
+K++ E + K+ EQ L+ D+ + +L+VKNL+ D+ LR+HF
Sbjct: 294 QKKSER---ETELKQK-FEQSLKEAA------DKSQGSNLYVKNLDESVTDDKLREHFAP 343
Query: 639 HIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
G I S KV +++ VS G GF+ F + E A+ ++ G ++ L + L
Sbjct: 344 F---GTITSCKV---MRDPTGVSRGSGFVAFSTPEEASRAITEMNGKMIVTKPLYVALAQ 397
Query: 699 AKKDEQVVKKAE 710
K+D + +A+
Sbjct: 398 RKEDRKARLQAQ 409
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S + VKNL + VT+D+LR+ F+ G IT K+MR G SR F+ F T +EA AI
Sbjct: 321 SNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPTGVSRGSGFVAFSTPEEASRAITE 380
Query: 61 FNKSYLDTCRISCEIARK 78
N + T + +A++
Sbjct: 381 MNGKMIVTKPLYVALAQR 398
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 609 DP--DRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGF 666
DP ++V+ +++VKNL+ DE L K FGE G S + +++G+ S GFGF
Sbjct: 209 DPSGEKVKFTNVYVKNLSESLSDEELNKVFGEF---GVTTSCVI---MRDGEGKSKGFGF 262
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAK---------KDEQVVKKAEKDKSSTK 717
+ F++ + A L G D + K K EQ +K+A +
Sbjct: 263 VNFENSDDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSN 322
Query: 718 LLVRNV 723
L V+N+
Sbjct: 323 LYVKNL 328
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + ++++ L F + G T +MR +GKS+ F F+ F +A A+
Sbjct: 218 TNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDA 277
Query: 61 FNKSYLD 67
N D
Sbjct: 278 LNGKTFD 284
>gi|159163365|pdb|1WHW|A Chain A, Solution Structure Of The N-Terminal Rna Binding Domain
From Hypothetical Protein Bab23448
Length = 99
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 59/84 (70%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RLFVRNL YT++E++L + FS +G +SE+H +D TK+ KG A+V + PE A +A
Sbjct: 10 RLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69
Query: 360 LDNSIFQGRLLHVMPARHKKSSDK 383
+D +FQGR+LHV+P+ KK + +
Sbjct: 70 VDGQVFQGRMLHVLPSTIKKEASQ 93
>gi|401827276|ref|XP_003887730.1| RNA binding domain-containing protein [Encephalitozoon hellem ATCC
50504]
gi|392998737|gb|AFM98749.1| RNA binding domain-containing protein [Encephalitozoon hellem ATCC
50504]
Length = 411
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 177/413 (42%), Gaps = 88/413 (21%)
Query: 285 SSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAY 344
+ +S+ ++ + S ++F+RN+P + E + + F ++G + EV ++ D + KG AY
Sbjct: 81 AQTSESEERMIKYSRKIFIRNIPTESDEQLIHDVFKEYGEIEEVGLL---DLRERKG-AY 136
Query: 345 VLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEE 404
V ++ E A +E N +++ M AR DK E
Sbjct: 137 VKFSKGECA---LEAYRNV----KIIGGMKARMFPWKDKAE------------------- 170
Query: 405 RKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAE 464
G + +N+LF +++V+ I + +L+D DL R+AL ET ++ E
Sbjct: 171 ------KGRYEHYNTLFFNFESIVKRICESERIGIKELVDVNDKDLGTRMALIETHLVQE 224
Query: 465 TKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKV 524
TK+ L N G+ + +L G TD +++N+ EL K S K+
Sbjct: 225 TKEFLENNGIYLDNL----TGDTD-----KKTLIIRNM-------ELMKCLDLIDSRCKI 268
Query: 525 ILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDA 584
+ +K LAL+ F E EA ++ L KR K +Y E+AP +S+ ST + ++
Sbjct: 269 SIAPSKCLALLKFEEEEEARKCYRKLNLKRMKEQVIYCEYAPMCNVSK-STREEMPEDKP 327
Query: 585 VVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE-HIKEG 643
G+ K L ++N+ F+ +E +R+ F H+ +
Sbjct: 328 RKGQPINK-------------------------LLIRNVPFQASEEEIRRMFNSFHVVDV 362
Query: 644 RILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDL-QGTILDGHALILQ 695
RI VK+ + S GF F+ S + T + T L G L+L+
Sbjct: 363 RI---PVKR-----EGTSRGFCFVTLGSPDEVTAAIKHFGSSTHLYGRRLVLE 407
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
RI VK+LP+ T++ + FS+ G+ITD + + + GK R+ FIG+ E+E EAI+Y
Sbjct: 2 RIVVKDLPESTTKEEVEKEFSKHGKITDVFMAKNERGKFRRICFIGYMGEKEGMEAIRYR 61
Query: 62 NKSYLDTCRISCEIAR 77
+ S +I CE R
Sbjct: 62 DGSLFKNQKIRCEALR 77
>gi|320167378|gb|EFW44277.1| poly A binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 662
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 181/414 (43%), Gaps = 52/414 (12%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
SG L+V +L TE +L E F+ G V + + D T+RS G AYV + A R
Sbjct: 42 FPSGSLYVGDLHPEVTEAQLFEIFNNIGPVVSIRVCRDAITRRSLGYAYVNFHAAVDAER 101
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
A++ L+ S+ +G+ +M ++ + K L N K L + + + S
Sbjct: 102 ALDTLNYSLIRGKPCRIMWSQRDPAVRKSGLGNVF---IKNLDKTIDNKALLDTFS---- 154
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVN 475
A+ ++ EN ++ +G + +EA + A+ G ++ K+ G+
Sbjct: 155 AFGNILSCKVVTDENGSKGYGFVHYE--TQEAAETAIAKVNG---MVINGKQVFV--GIF 207
Query: 476 VSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP------ST 529
V E G +G+ + +VF VKNLP D+++ L MF KFG + V++ +
Sbjct: 208 VPRKERVELG--EGVTKFTNVF-VKNLPEDTTDAALNDMFSKFGKITSVVIMKSSDDDKS 264
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH 589
K V + + +A AA L G L++ A K ++ + +
Sbjct: 265 KGFGFVCYEKVEDAQAAVNALNGTELAGKTLFVARA----------QKKAEREAELKQRY 314
Query: 590 DAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVK 649
DA R LE + ++ + +L+VKNL+ ++ +R F G I SVK
Sbjct: 315 DALR------LERI-------NKYQGINLYVKNLDDAIDEDKIRTEFAPF---GTITSVK 358
Query: 650 VKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDE 703
+ +++ K S GFGFI F S E AT ++ G + G L + A++ E
Sbjct: 359 I---MRDEKGKSRGFGFICFSSAEEATKAVTEMNGQTIQGFPKPLYVALAQRAE 409
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ED++R F+ G IT K+MR + GKSR F FI F + +EA +A+ N
Sbjct: 330 LYVKNLDDAIDEDKIRTEFAPFGTITSVKIMRDEKGKSRGFGFICFSSAEEATKAVTEMN 389
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V+NL ED++R F+ FG ++ V I+ D+ K S+G ++ ++ E A++A+ +
Sbjct: 330 LYVKNLDDAIDEDKIRTEFAPFGTITSVKIMRDEKGK-SRGFGFICFSSAEEATKAVTEM 388
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQ 384
+ QG + A +++ D++
Sbjct: 389 NGQTIQGFPKPLYVALAQRAEDRR 412
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIK 59
+ + VKNLP+ T+ L D FS+ G+IT +M++ D KS+ F F+ + ++A+ A+
Sbjct: 224 TNVFVKNLPEDTTDAALNDMFSKFGKITSVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVN 283
Query: 60 YFNKSYL 66
N + L
Sbjct: 284 ALNGTEL 290
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
++FVKNL T D L F K G+I SV + K + K S GFGF+ ++ VE A
Sbjct: 225 NVFVKNLPEDTTDAALNDMFS---KFGKITSVVIMKSSDDDK--SKGFGFVCYEKVEDAQ 279
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKD 712
L GT L G L + K + + K D
Sbjct: 280 AAVNALNGTELAGKTLFVARAQKKAEREAELKQRYD 315
>gi|196011702|ref|XP_002115714.1| hypothetical protein TRIADDRAFT_59686 [Trichoplax adhaerens]
gi|190581490|gb|EDV21566.1| hypothetical protein TRIADDRAFT_59686 [Trichoplax adhaerens]
Length = 341
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 60/92 (65%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VKNLP ++EDRLR FS+ GE+TD +L T+D R+FAFIG+R + +A A K+
Sbjct: 2 SRLVVKNLPCNISEDRLRALFSEFGELTDVQLKFTEDKIFRRFAFIGYRHKCDASTAQKF 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
FN SY+DT +I E + + R W +YS
Sbjct: 62 FNNSYIDTSKIEIEPCYPLNERIAARVWKKYS 93
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
RL V+NLP +ED LR FS+FG +++V + +D K + A++ Y AS A +
Sbjct: 2 SRLVVKNLPCNISEDRLRALFSEFGELTDVQLKFTED-KIFRRFAFIGYRHKCDASTAQK 60
Query: 359 VLDNSIFQGRLLHVMPA 375
+NS + + P
Sbjct: 61 FFNNSYIDTSKIEIEPC 77
>gi|324531966|gb|ADY49202.1| RNA-binding protein 19, partial [Ascaris suum]
Length = 174
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 10/142 (7%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ VK LP TE +LR F + G++TD L TKDGK R+FAF+GF E A+ A+
Sbjct: 2 SRLIVKGLPSAYTEAKLRVVFEKYGQLTDCSLKYTKDGKFRRFAFVGFGDEHNAKRALSD 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIE- 119
N ++++ RI E + GD PR WS+Y+ + + +P A ++ +K +
Sbjct: 62 LNNTFINASRIQVEECKPFGDETKPRAWSKYA---KDSSAYKRAHPEEANEKSKKIKFDD 118
Query: 120 ------KVTENDDPQLLEFLQV 135
K E+ D + +EFLQV
Sbjct: 119 TPMNKKKKLEHRDEKFIEFLQV 140
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL V+ LP TE +LR F K+G +++ + KD K + A+V + +A RA+
Sbjct: 3 RLIVKGLPSAYTEAKLRVVFEKYGQLTDCSLKYTKDGKFRR-FAFVGFGDEHNAKRALSD 61
Query: 360 LDNSIFQGRLLHV 372
L+N+ + V
Sbjct: 62 LNNTFINASRIQV 74
>gi|196011704|ref|XP_002115715.1| hypothetical protein TRIADDRAFT_59687 [Trichoplax adhaerens]
gi|190581491|gb|EDV21567.1| hypothetical protein TRIADDRAFT_59687 [Trichoplax adhaerens]
Length = 319
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 136/284 (47%), Gaps = 66/284 (23%)
Query: 450 LAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEG 509
+AVR+ALGET+++A+T+ L + VN+ SL + +RS V +VKNLP+ + +
Sbjct: 1 MAVRLALGETKLVADTRSFLMSHAVNLESLTK------PCKERSKTVIIVKNLPFGTKKN 54
Query: 510 ELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGV---PLYLEWAP 566
EL ++F ++GS+++VI+P + ALV + + +EA F+ LAY ++ +YL +
Sbjct: 55 ELCELFSEYGSIERVIIPPSGITALVEYTKDIEARNGFRKLAYSKFVKCINHCIYL-FVD 113
Query: 567 SDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFK 626
D G+ DAK Q L+ R++F++NLNF+
Sbjct: 114 ED------------------GKVDAK----TQNLQ--------------RTIFIRNLNFQ 137
Query: 627 TCDENLRKHFGEHIKEGR-ILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGT 685
T + LRK + + + G +L+ K + F +F T + Q
Sbjct: 138 TDECRLRKVYHLYFRLGSGLLAQLTNKFFQE---------FRKFSEPNIETEKMPNGQSR 188
Query: 686 ILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQR 729
I + I KK+ V K ++TK+LV+N+ FEA +
Sbjct: 189 IYSQTSTI------KKNMSVSNKP----NTTKILVKNLPFEATK 222
>gi|396081852|gb|AFN83466.1| polyadenylate binding protein 2 [Encephalitozoon romaleae SJ-2008]
Length = 411
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 168/403 (41%), Gaps = 94/403 (23%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++F+RN+P +E + + F ++G + EV ++ D K KG AYV ++ E A A
Sbjct: 94 SRKIFIRNVPMEVSEQIIHDTFKEYGEIEEVGLL---DLKEGKG-AYVKFSEGECAVEAY 149
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
+ + + M AR DK E + +
Sbjct: 150 RSV-------KTIGGMKARMYPWKDKAE-------------------------KSQYEHY 177
Query: 418 NSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVS 477
N+LF ++VV+ I ++ DL+D DL R+AL ET ++ ETK+ L N G+ +
Sbjct: 178 NTLFFSFESVVKRICESERIAAKDLVDINDKDLGARMALIETHLVQETKEFLENNGIYLD 237
Query: 478 SLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVF 537
+L G+ D KR+ +++N+ EL K S K+ + +K LAL+ F
Sbjct: 238 NL----TGEID--KRT---LIIRNM-------ELMKCLDLVDSGCKISIAPSKCLALLKF 281
Query: 538 LEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL---SQSSTSKGNQKNDAVVGEHDAKRA 594
E EA +K L+ KR K +Y E+AP + ++ K K D + +
Sbjct: 282 EEEEEARKCYKKLSLKRMKEKVIYCEYAPVCNIPKDTKEEMPKDYSKKDRAINK------ 335
Query: 595 LLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE-HIKEGRILSVKVKKH 653
L V+N+ F+ ++ +RK F H+ + RI +K+
Sbjct: 336 -----------------------LLVRNVPFQASEKEIRKIFDSFHVVDVRI---PIKR- 368
Query: 654 LKNGKNVSMGFGFIEFDSVETATNVCRDL-QGTILDGHALILQ 695
+ S GF F+ S + R T L G L+L+
Sbjct: 369 ----EGTSRGFCFVTLGSPDEVDAAIRHFGSSTHLYGRRLVLE 407
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
RI VK+LP T++ + FS+ G ITD + R G+ R+ FIG+ E+E EAIKY
Sbjct: 2 RIVVKDLPLSTTKEEIEKEFSKHGRITDVFMARNGQGRFRRICFIGYMEEKEGVEAIKYR 61
Query: 62 NKSYLDTCRISCE 74
N S +I CE
Sbjct: 62 NGSLFKNQKIRCE 74
>gi|294460856|gb|ADE76001.1| unknown [Picea sitchensis]
Length = 181
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 2/70 (2%)
Query: 663 GFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV--KKAEKDKSSTKLLV 720
GF FIEFD+ ETA +VC+ LQG +LDGHAL LQL H++K+ + KK +K KSSTK++V
Sbjct: 13 GFCFIEFDTDETARDVCKKLQGAVLDGHALSLQLSHSRKEAKSTHEKKYDKSKSSTKIIV 72
Query: 721 RNVAFEAQRK 730
RNVAFEA +K
Sbjct: 73 RNVAFEATKK 82
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I V+N+ T+ L FS G+I +L + D R FAFI F T+QEAE A
Sbjct: 68 TKIIVRNVAFEATKKDLSQLFSPFGQIKSLRLPKKADQSHRGFAFIEFVTKQEAENAFNA 127
Query: 61 FNKSYLDTCRISCEIAR 77
+ S+L + E AR
Sbjct: 128 LSSSHLYGRHLVLEQAR 144
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++ VRN+ + AT+ +L + FS FG + + + D + +G A++ + + A A
Sbjct: 67 STKIIVRNVAFEATKKDLSQLFSPFGQIKSLRLPKKAD-QSHRGFAFIEFVTKQEAENAF 125
Query: 358 EVLDNSIFQGRLLHVMPARHKKS 380
L +S GR L + AR +S
Sbjct: 126 NALSSSHLYGRHLVLEQAREDES 148
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 492 RSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAA 546
+S+ +V+N+ +++++ +L+++F FG + + LP S + A + F+ EA A
Sbjct: 65 KSSTKIIVRNVAFEATKKDLSQLFSPFGQIKSLRLPKKADQSHRGFAFIEFVTKQEAENA 124
Query: 547 FKGLAYKRYKGVPLYLEWAPSD 568
F L+ G L LE A D
Sbjct: 125 FNALSSSHLYGRHLVLEQARED 146
>gi|392512799|emb|CAD26357.2| POLYADENYLATE BINDING PROTEIN 2 [Encephalitozoon cuniculi GB-M1]
Length = 413
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 169/400 (42%), Gaps = 86/400 (21%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++F+RN+P A E +R+ F ++G + EV ++ D + KG AYV ++ E A +
Sbjct: 94 SRKIFIRNVPAEANEQFVRDVFKEYGEIEEVGLL---DRREGKG-AYVKFSRGECA---L 146
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
E F G + M ++ +Q H +
Sbjct: 147 EAYRKVQFIGGVKARMCPWKDRAEKRQYEH-----------------------------Y 177
Query: 418 NSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVS 477
N+LF +++V+ I VS D++D DL R+A ET ++ ETKK L + G+ +
Sbjct: 178 NTLFFSFESIVKRICESERVSIRDVVDVNDKDLGARMARIETHLVQETKKFLESNGIYLD 237
Query: 478 SLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVF 537
L G D ++ +V+N+ EL K K+ + +K LAL+ F
Sbjct: 238 HL----TGSVD-----RNMLIVRNM-------ELMKCLDLVDDRCKISVAPSKCLALLKF 281
Query: 538 LEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLE 597
+ +A ++ L+ KR K +Y E+AP + +S+ GE +KR E
Sbjct: 282 DKEEDARRCYRKLSLKRVKEHVVYCEYAPICSVPEST------------GEEPSKRPPEE 329
Query: 598 QQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE-HIKEGRILSVKVKKHLKN 656
+ + L ++N+ F+ E +RK FG H+ + RI VK+
Sbjct: 330 ASGQLMN------------KLLIRNVPFQASKEEIRKIFGSFHVVDVRI---PVKR---- 370
Query: 657 GKNVSMGFGFIEFDSVETATNVCRDL-QGTILDGHALILQ 695
+ S GF F+ +S + T T L G L+L+
Sbjct: 371 -EGSSRGFCFVTLNSPDDVTAAIEHFGSSTHLYGRRLVLE 409
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
RI VKNLP T++ + FS+ G+ITD + R + GK R+ F+G+ E++ EAI+Y
Sbjct: 2 RIVVKNLPASTTKEEIEKEFSRHGKITDVFMARNEQGKFRRICFVGYMEEKDGVEAIRYR 61
Query: 62 NKSYLDTCRISCEIARKVGDPNM 84
+ S RI+CE R+ G P +
Sbjct: 62 DGSLFKNQRIACEEVRE-GSPEI 83
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 186/432 (43%), Gaps = 85/432 (19%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L T+ +L + F++ G V V + D T+RS G YV Y+ P+ A+RA++VL
Sbjct: 36 LYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDVL 95
Query: 361 DNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ + R + +M P+ K K+ D + LH++ S L
Sbjct: 96 NFTPLNNRPIRIMYSHRDPSIRKSGQGNIFIKNLDKAIDHKALHDTFSSFGNILSC---- 151
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIA 463
+ A + SG +K + F++ DT E A+K + +L ND V +
Sbjct: 152 -KVAVDGSGQSKGYG--FVQFDT--EEAAQKAIEKLNGML---LNDKQVYV--------- 194
Query: 464 ETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDK 523
G + E S G + N+VF VKNL +++ EL K FG+FG++
Sbjct: 195 ---------GPFLRKQERESTGDR---AKFNNVF-VKNLSESTTDDELKKTFGEFGTITS 241
Query: 524 VIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKG 578
++ +K V F +AA A + L K+ EW K
Sbjct: 242 AVVMRDGDGKSKCFGFVNFESTDDAARAVEALNGKKIDDK----EW---------YVGKA 288
Query: 579 NQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE 638
+K++ EH+ K + E D+ + +L+VKNL+ DE L++ F
Sbjct: 289 QKKSER---EHELKIKFEQSMKEAA-------DKYQGANLYVKNLDDSIADEKLKELFSS 338
Query: 639 HIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
+ G I S KV +++ VS G GF+ F + E A+ ++ G ++ L + L
Sbjct: 339 Y---GTITSCKV---MRDPNGVSRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVTLAQ 392
Query: 699 AKKDEQVVKKAE 710
K+D + +A+
Sbjct: 393 RKEDRRARLQAQ 404
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + T+D L+ F + G IT A +MR DGKS+ F F+ F + +A A++ N
Sbjct: 215 VFVKNLSESTTDDELKKTFGEFGTITSAVVMRDGDGKSKCFGFVNFESTDDAARAVEALN 274
Query: 63 KSYLD 67
+D
Sbjct: 275 GKKID 279
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + +++L++ FS G IT K+MR +G SR F+ F T +EA A+
Sbjct: 316 ANLYVKNLDDSIADEKLKELFSSYGTITSCKVMRDPNGVSRGSGFVAFSTPEEASRALLE 375
Query: 61 FNKSYLDTCRISCEIARK 78
N + + + +A++
Sbjct: 376 MNGKMVASKPLYVTLAQR 393
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 15/122 (12%)
Query: 611 DRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFD 670
DR + ++FVKNL+ T D+ L+K FGE G I S V +++G S FGF+ F+
Sbjct: 208 DRAKFNNVFVKNLSESTTDDELKKTFGEF---GTITSAVV---MRDGDGKSKCFGFVNFE 261
Query: 671 SVETATNVCRDLQGTILDGHALILQLCHAK---------KDEQVVKKAEKDKSSTKLLVR 721
S + A L G +D + K K EQ +K+A L V+
Sbjct: 262 STDDAARAVEALNGKKIDDKEWYVGKAQKKSEREHELKIKFEQSMKEAADKYQGANLYVK 321
Query: 722 NV 723
N+
Sbjct: 322 NL 323
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G +F++NL L + FS FGN+ + VD + +SKG +V + E+A +AIE
Sbjct: 122 GNIFIKNLDKAIDHKALHDTFSSFGNILSCKVAVD-GSGQSKGYGFVQFDTEEAAQKAIE 180
Query: 359 VLDNSIFQGRLLHVMPARHKK----SSDKQELHN 388
L+ + + ++V P K+ + D+ + +N
Sbjct: 181 KLNGMLLNDKQVYVGPFLRKQERESTGDRAKFNN 214
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ L+V+NL + +++L+E FS +G ++ ++ D + S+G +V ++ PE ASRA
Sbjct: 314 QGANLYVKNLDDSIADEKLKELFSSYGTITSCKVMRDPNGV-SRGSGFVAFSTPEEASRA 372
Query: 357 IEVLDNSIFQGRLLHVMPARHKK 379
+ ++ + + L+V A+ K+
Sbjct: 373 LLEMNGKMVASKPLYVTLAQRKE 395
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL K + L D FS G I K+ G+S+ + F+ F TE+ A++AI+ N
Sbjct: 124 IFIKNLDKAIDHKALHDTFSSFGNILSCKVAVDGSGQSKGYGFVQFDTEEAAQKAIEKLN 183
Query: 63 KSYLD 67
L+
Sbjct: 184 GMLLN 188
>gi|19173378|ref|NP_597181.1| POLYADENYLATE BINDING PROTEIN 2 [Encephalitozoon cuniculi GB-M1]
gi|449328776|gb|AGE95052.1| polyadenylate binding protein 2 [Encephalitozoon cuniculi]
Length = 432
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 169/400 (42%), Gaps = 86/400 (21%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++F+RN+P A E +R+ F ++G + EV ++ D + KG AYV ++ E A +
Sbjct: 113 SRKIFIRNVPAEANEQFVRDVFKEYGEIEEVGLL---DRREGKG-AYVKFSRGECA---L 165
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
E F G + M ++ +Q H +
Sbjct: 166 EAYRKVQFIGGVKARMCPWKDRAEKRQYEH-----------------------------Y 196
Query: 418 NSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVS 477
N+LF +++V+ I VS D++D DL R+A ET ++ ETKK L + G+ +
Sbjct: 197 NTLFFSFESIVKRICESERVSIRDVVDVNDKDLGARMARIETHLVQETKKFLESNGIYLD 256
Query: 478 SLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVF 537
L G D ++ +V+N+ EL K K+ + +K LAL+ F
Sbjct: 257 HL----TGSVD-----RNMLIVRNM-------ELMKCLDLVDDRCKISVAPSKCLALLKF 300
Query: 538 LEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLE 597
+ +A ++ L+ KR K +Y E+AP + +S+ GE +KR E
Sbjct: 301 DKEEDARRCYRKLSLKRVKEHVVYCEYAPICSVPEST------------GEEPSKRPPEE 348
Query: 598 QQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE-HIKEGRILSVKVKKHLKN 656
+ + L ++N+ F+ E +RK FG H+ + RI VK+
Sbjct: 349 ASGQLMN------------KLLIRNVPFQASKEEIRKIFGSFHVVDVRI---PVKR---- 389
Query: 657 GKNVSMGFGFIEFDSVETATNVCRDL-QGTILDGHALILQ 695
+ S GF F+ +S + T T L G L+L+
Sbjct: 390 -EGSSRGFCFVTLNSPDDVTAAIEHFGSSTHLYGRRLVLE 428
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
RI VKNLP T++ + FS+ G+ITD + R + GK R+ F+G+ E++ EAI+Y
Sbjct: 21 RIVVKNLPASTTKEEIEKEFSRHGKITDVFMARNEQGKFRRICFVGYMEEKDGVEAIRYR 80
Query: 62 NKSYLDTCRISCEIARKVGDPNM 84
+ S RI+CE R+ G P +
Sbjct: 81 DGSLFKNQRIACEEVRE-GSPEI 102
>gi|412991277|emb|CCO16122.1| predicted protein [Bathycoccus prasinos]
Length = 620
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 186/432 (43%), Gaps = 86/432 (19%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L +ATE +L E FS G V + + D T+RS G AYV ++ + A+RAI+VL
Sbjct: 45 LYVGDLESSATEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFSQAQDAARAIDVL 104
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHN----STSQGTKTLKQRRE--------EERKAS 408
+ + G+ + ++ ++ + K + N + + T+ R + A+
Sbjct: 105 NFQVVNGKPIRILYSQRDPTIRKSGVGNIFIKNLDKDIDTVALRDTFAQFGNIVSAKVAT 164
Query: 409 EASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKA 468
+ GN+K + F++ DT A K + K + + E ND V + G Q AE
Sbjct: 165 DGQGNSKGYG--FIQFDT---EAAAKEAIEKVNGM--ELNDKVVYV--GPFQRRAER--- 212
Query: 469 LTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS 528
G T+ + N+VF VKNL + ++ EL K+F FG + V++
Sbjct: 213 ----------------GTTE--TKFNNVF-VKNLGDEVTDEELRKVFEGFGPVTSVMISK 253
Query: 529 TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGE 588
+ KG + Y+ P D SK ++ D GE
Sbjct: 254 DED-------------GKSKGFGFVCYE--------TPED------ASKAVEELDGKHGE 286
Query: 589 HDAKRALLEQQLEGVTDADIDP----------DRVESRSLFVKNLNFKTCDENLRKHFGE 638
D K + Q + +A++ +++ +L++KNL DE LR+ F E
Sbjct: 287 EDKKWVVCRAQKKAEREAELKAKFEAERRERMEKMAGANLYIKNLEDGADDETLRELFKE 346
Query: 639 HIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
G I S +V +++ VS G F+ F S E AT +L G ++ L + L
Sbjct: 347 F---GTITSCRV---MRDASGVSRGSAFVAFSSPEEATRAVTELNGKMVGAKPLYVALAQ 400
Query: 699 AKKDEQVVKKAE 710
K+D ++ +A+
Sbjct: 401 RKEDRRMRLQAQ 412
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
+ E + L+++NL A ++ LRE F +FG ++ ++ D + S+G A+V ++ PE
Sbjct: 317 RMEKMAGANLYIKNLEDGADDETLRELFKEFGTITSCRVMRDA-SGVSRGSAFVAFSSPE 375
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKK 379
A+RA+ L+ + + L+V A+ K+
Sbjct: 376 EATRAVTELNGKMVGAKPLYVALAQRKE 403
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL K + LRD F+Q G I AK+ G S+ + FI F TE A+EAI+ N
Sbjct: 133 IFIKNLDKDIDTVALRDTFAQFGNIVSAKVATDGQGNSKGYGFIQFDTEAAAKEAIEKVN 192
Query: 63 KSYLD 67
L+
Sbjct: 193 GMELN 197
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KNL ++ LR+ F + G IT ++MR G SR AF+ F + +EA A+
Sbjct: 324 ANLYIKNLEDGADDETLRELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPEEATRAVTE 383
Query: 61 FNKSYLDTCRISCEIARKVGDPNM 84
N + + +A++ D M
Sbjct: 384 LNGKMVGAKPLYVALAQRKEDRRM 407
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
+ VKNL VT++ LR F G +T + + +DGKS+ F F+ + T ++A +A++
Sbjct: 222 VFVKNLGDEVTDEELRKVFEGFGPVTSVMISKDEDGKSKGFGFVCYETPEDASKAVE 278
>gi|340503642|gb|EGR30187.1| RNA binding motif protein 19, putative [Ichthyophthirius
multifiliis]
Length = 155
Score = 85.5 bits (210), Expect = 9e-14, Method: Composition-based stats.
Identities = 38/92 (41%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SRI VKN+P + E +L++ FS++G +TD K+ K K R+F FIG++ Q+A+ A+ Y
Sbjct: 3 SRIIVKNIPTNIDEKKLKEIFSKQGVVTDVKIC-FKGQKHRRFCFIGYKNSQDAQNALIY 61
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
FN +YL ++S + A+ + DP++P+ WS+Y+
Sbjct: 62 FNNTYLQMNKLSVQFAKTLDDPDLPKTWSKYT 93
>gi|168018573|ref|XP_001761820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686875|gb|EDQ73261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 192/435 (44%), Gaps = 95/435 (21%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V +L +E +L E FS+ G V + + D T+RS G +YV Y + A+RA+
Sbjct: 23 STSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYNNAQDATRAL 82
Query: 358 EVLDNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQR 400
E+L+ + G+ + +M P+ K KS D + LH++ + L +
Sbjct: 83 ELLNFTGVNGKPIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFAAFGNILSCK 142
Query: 401 REEERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGET 459
A++ASG +K + + F + ++ I + +G + L +
Sbjct: 143 -----VATDASGQSKGYGFVQFEQEESAQNAIEKVNG-----------------MLLNDK 180
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
QV G V E AG G+ + N+V+ VKNL +++ EL K+FG +G
Sbjct: 181 QVFV---------GPFVRRQERDQAG---GVSKFNNVY-VKNLADVTTDDELKKVFGAWG 227
Query: 520 SLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
+ ++ +K V F P +AA A + L K++ Y+ A
Sbjct: 228 PISSAVVMRDNDGKSKCFGFVNFEHPDDAAKAVEALQGKKFDEKEWYVGRA--------- 278
Query: 575 TSKGNQKNDAVVGEHDAK-RALLEQQLEGVTDADIDPDRVESR---SLFVKNLNFKTCDE 630
QK E +A+ RA EQ+ + +R+E +L++KNL+ DE
Sbjct: 279 -----QKKS----EREAELRAKFEQERK---------ERIEKYQGVNLYLKNLDDTVDDE 320
Query: 631 NLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGH 690
+R+ F E+ G I S KV +++ + S G GF+ F S + AT ++ G ++
Sbjct: 321 KIRELFAEY---GTITSCKV---MRDHQGQSKGSGFVAFSSPDEATRAVTEMNGKMVGNK 374
Query: 691 ALILQLCHAKKDEQV 705
L + L K++ ++
Sbjct: 375 PLYVALAQRKEERRM 389
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ VKNL T+D L+ F G I+ A +MR DGKS+ F F+ F +A +A+
Sbjct: 205 VYVKNLADVTTDDELKKVFGAWGPISSAVVMRDNDGKSKCFGFVNFEHPDDAAKAV 260
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL V ++++R+ F++ G IT K+MR G+S+ F+ F + EA A+ N
Sbjct: 308 LYLKNLDDTVDDEKIRELFAEYGTITSCKVMRDHQGQSKGSGFVAFSSPDEATRAVTEMN 367
Query: 63 KSYLDTCRISCEIARK 78
+ + +A++
Sbjct: 368 GKMVGNKPLYVALAQR 383
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I +KNL K + L D F+ G I K+ G+S+ + F+ F E+ A+ AI+
Sbjct: 112 ANIFIKNLDKSIDNKALHDTFAAFGNILSCKVATDASGQSKGYGFVQFEQEESAQNAIEK 171
Query: 61 FNKSYLD 67
N L+
Sbjct: 172 VNGMLLN 178
>gi|405973173|gb|EKC37903.1| Polyadenylate-binding protein 4 [Crassostrea gigas]
Length = 465
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 178/413 (43%), Gaps = 58/413 (14%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+VR+L TED L + FS G V V + D T+RS G AYV + P A RA++ +
Sbjct: 12 LYVRDLHPDVTEDMLFKKFSTAGPVLSVRVCRDMITRRSLGYAYVNFHQPADAERALDTM 71
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ I +GR + + + S K + N K + S + KA
Sbjct: 72 NFDIIKGRPIRITWYQRDPSLRKSGVGNVFI--------------KKLDKSIDNKALYDT 117
Query: 421 FMRPDTV--VENIARKHGVSKSDLLDREANDLAVRIALGETQ-VIAETKKALTNAGVNVS 477
F + + + +HG + E D A RIA+ + ++ KK G +S
Sbjct: 118 FSAFGNISSCKIVCDEHGSRGYGFVHFET-DEAARIAIEKVNGMLLNGKKVFV--GRFMS 174
Query: 478 SLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSL--DKVILP----STKT 531
E G+++ N+V+ VKNL ++ + +L ++F +G + KV++ +K
Sbjct: 175 RRERLEVLDL-GMRKFNNVY-VKNLSEETDDEKLREIFELYGKIISAKVMIDDSSRKSKQ 232
Query: 532 LALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDA 591
V F P A A + L G LY+ A + + Q
Sbjct: 233 FGFVSFENPEAAKKAVEALNGNDNAGKILYVGRAQTKIERQ------------------- 273
Query: 592 KRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVK 651
A L+++ E + I+ R + +LFVKNL+ D+ LRK F + G I S KV
Sbjct: 274 --AELKEKFERIRKERIN--RYQGVNLFVKNLDDNIDDKRLRKEFAQF---GTITSAKV- 325
Query: 652 KHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQ 704
+NG+ S GFGF+ F S E AT ++ I++ L + L K+D +
Sbjct: 326 -MTENGR--SKGFGFVYFSSPEEATKAIVEMNEKIIEARPLYVALAQRKEDRK 375
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 294 EVLESG-----RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYA 348
EVL+ G ++V+NL +++LRE F +G + +++D +++SK +V +
Sbjct: 180 EVLDLGMRKFNNVYVKNLSEETDDEKLREIFELYGKIISAKVMIDDSSRKSKQFGFVSFE 239
Query: 349 IPESASRAIEVLDNSIFQGRLLHVMPARHK 378
PE+A +A+E L+ + G++L+V A+ K
Sbjct: 240 NPEAAKKAVEALNGNDNAGKILYVGRAQTK 269
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + + RLR F+Q G IT AK+M T++G+S+ F F+ F + +EA +AI N
Sbjct: 296 LFVKNLDDNIDDKRLRKEFAQFGTITSAKVM-TENGRSKGFGFVYFSSPEEATKAIVEMN 354
Query: 63 KSYLDTCRISCEIARK 78
+ ++ + +A++
Sbjct: 355 EKIIEARPLYVALAQR 370
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 118/289 (40%), Gaps = 40/289 (13%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G +F++ L + L + FS FGN+S IV D+ S+G +V + E+A AIE
Sbjct: 98 GNVFIKKLDKSIDNKALYDTFSAFGNISSCKIVCDEHG--SRGYGFVHFETDEAARIAIE 155
Query: 359 VLDNSIFQGRLLHV---MPARHKKSSDKQELHNSTSQGTKTLKQRREEE--RKASEASGN 413
++ + G+ + V M R + + + K L + ++E R+ E G
Sbjct: 156 KVNGMLLNGKKVFVGRFMSRRERLEVLDLGMRKFNNVYVKNLSEETDDEKLREIFELYGK 215
Query: 414 TKAWNSLFMRPDTVVENIARKHG-----------VSKSDLLDREANDLAVRI-ALGETQV 461
+ ++++ +RK +K + ND A +I +G Q
Sbjct: 216 I-------ISAKVMIDDSSRKSKQFGFVSFENPEAAKKAVEALNGNDNAGKILYVGRAQT 268
Query: 462 IAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHV-FLVKNLPYDSSEGELAKMFGKFGS 520
E + L E+F + + + R V VKNL + + L K F +FG+
Sbjct: 269 KIERQAELK---------EKFERIRKERINRYQGVNLFVKNLDDNIDDKRLRKEFAQFGT 319
Query: 521 LD--KVILPS--TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
+ KV+ + +K V F P EA A + K + PLY+ A
Sbjct: 320 ITSAKVMTENGRSKGFGFVYFSSPEEATKAIVEMNEKIIEARPLYVALA 368
>gi|196015807|ref|XP_002117759.1| hypothetical protein TRIADDRAFT_61835 [Trichoplax adhaerens]
gi|190579644|gb|EDV19735.1| hypothetical protein TRIADDRAFT_61835 [Trichoplax adhaerens]
Length = 741
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 176/402 (43%), Gaps = 56/402 (13%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTK-RSKGIAYVLYAIPESASRAIEV 359
+FVRNLPY TE + + F G + +V DK TK +G YV + + E A RA
Sbjct: 16 IFVRNLPYDITETQFEQLFDDVGPIRSSFLVRDKGTKDECRGFGYVTFTLQEDAERAT-T 74
Query: 360 LDNSIFQGRLLHVMPA--------RHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
L SI +GR + ++ A + K++ D+ E NS+ +K+ R + +
Sbjct: 75 LKKSI-RGRHIQILLAQRKFDTNTKRKQNHDEIEEVNSSHLEAPVIKKSRSYSQLDNVQL 133
Query: 412 GNTKAWNSLFMRPDT----VVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKK 467
NT +S+ R ++ +++N++ +S+ L R L + I E K
Sbjct: 134 ENT--ISSIVSRANSGRTILIQNLS--PDISRKRLYKR----------LRKKVDIEELKY 179
Query: 468 ALTNAGVNVSSLEEFSAGKTDGLKRSNHV-FLVKNLPYDSSEGELAKMFGKFGSLDKVIL 526
L + +NV + + KT K N +V+NL ++ E +L ++F +FG++ V +
Sbjct: 180 PLPGSQLNVQIVSKID--KTQSKKSLNKAKIIVRNLCFNCRERDLKEIFSQFGNVITVNI 237
Query: 527 PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDA-V 585
P A + F AA A K L + L+WA L +T++ +++++
Sbjct: 238 PPKGGFAFIQFENVFHAANAIKELNMTEVMNRRISLDWALPKSLYLKNTAENSKEHEGEK 297
Query: 586 VGEHDAKRALLEQQLEGVTDAD------------------IDPDRVESRSLFVKNLNFKT 627
V + L + E V D I D E ++LF++NL+F
Sbjct: 298 VTSDNCDSDLTDSDCEAVAKTDSANTTENAEEETKRNRHEIKEDVQEGKTLFIRNLSFDC 357
Query: 628 CDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEF 669
++ L++ F K G+I K+ + + S G F+++
Sbjct: 358 KEDELKEFFS---KFGKIRYCKIV--IDRANDYSRGVAFVKY 394
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 244 EEENDHNGD--SNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSK-DVQQEVLESGR 300
E +H G+ +++ CDS + DS V + D+ + + ++ +++++V E
Sbjct: 288 ENSKEHEGEKVTSDNCDSDLTDSDCEAVAKTDSANTTENAEEETKRNRHEIKEDVQEGKT 347
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LF+RNL + EDEL+E FSKFG + IV+D+ S+G+A+V Y SA + +E
Sbjct: 348 LFIRNLSFDCKEDELKEFFSKFGKIRYCKIVIDRANDYSRGVAFVKYVEKGSADKCLESY 407
Query: 361 DN 362
+N
Sbjct: 408 NN 409
>gi|357154719|ref|XP_003576878.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 653
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 191/433 (44%), Gaps = 87/433 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + + +L + F++ G V V + D T++S G AYV Y P A+RA+E+L
Sbjct: 36 LYVGDLDMSVQDAQLFDVFAQIGGVVSVRVCRDVTTRKSLGYAYVNYNTPADAARALEML 95
Query: 361 DNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ + GR + +M P+ K KS D + L+++ L +
Sbjct: 96 NFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILSCK--- 152
Query: 404 ERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI 462
A++ASG +K + + + R + I + +G+ +D ++ +G
Sbjct: 153 --VATDASGESKGYGFVQYERDEAAHAAIEKLNGMLMND----------KKVYVGPFI-- 198
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
K+ N+ NV + N+VF VKNL ++E +L ++FGKFG++
Sbjct: 199 --RKQERDNSPGNV---------------KFNNVF-VKNLSETTTEDDLREIFGKFGTIT 240
Query: 523 KVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
V++ +K V F P EAA A + L K++ EW +
Sbjct: 241 SVVVMREGDGRSKCFGFVNFESPDEAALAVQDLNGKKFDDK----EW---------YVGR 287
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
+K++ E + K E+ L+ D+ ++ +L++KNL+ DE LR+ F
Sbjct: 288 AQKKSER---EMELKEK-FEKNLQETA------DKYQNTNLYLKNLDDTVDDEKLRELFA 337
Query: 638 EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
E G I S KV +++ S G GF+ F S E A+ ++ ++ L + L
Sbjct: 338 EF---GAITSCKV---MRDSNGASRGSGFVAFKSAEDASRALAEMNNKMVGSKPLYVALA 391
Query: 698 HAKKDEQVVKKAE 710
K+D + +A+
Sbjct: 392 QRKEDRKARLQAQ 404
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + TED LR+ F + G IT +MR DG+S+ F F+ F + EA A++ N
Sbjct: 215 VFVKNLSETTTEDDLREIFGKFGTITSVVVMREGDGRSKCFGFVNFESPDEAALAVQDLN 274
Query: 63 KSYLD 67
D
Sbjct: 275 GKKFD 279
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KNL V +++LR+ F++ G IT K+MR +G SR F+ F++ ++A A+
Sbjct: 316 TNLYLKNLDDTVDDEKLRELFAEFGAITSCKVMRDSNGASRGSGFVAFKSAEDASRALAE 375
Query: 61 FNKSYLDTCRISCEIARK 78
N + + + +A++
Sbjct: 376 MNNKMVGSKPLYVALAQR 393
>gi|386780450|dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 190/437 (43%), Gaps = 85/437 (19%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L S L+V +L + T+ +L + F++ G V V + D T+RS G YV Y+ P ASR
Sbjct: 35 LTSTSLYVGDLEFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPNDASR 94
Query: 356 AIEVLDNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLK 398
A+E+L+ + G+ + VM P K KS D + LH++ S L
Sbjct: 95 AMEMLNFTPVNGKSIRVMYSHRDPTLRKSGSANIFIKNLDKSIDNKALHDTFSSFGNILS 154
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGE 458
+ A++++G +K + F++ D N G A D + + +
Sbjct: 155 CK-----IATDSNGQSKGYG--FVQYD----NEESAQG----------AIDKLNGMLMND 193
Query: 459 TQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKF 518
QV G + E S T G+ + +V+ VKNL +++ EL K+FG+F
Sbjct: 194 KQVYV---------GHFLRKQERES---TTGMTKFQNVY-VKNLSESTTDDELKKVFGEF 240
Query: 519 GSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQS 573
G++ ++ +K + F +AA A + L K++ EW
Sbjct: 241 GNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESLNGKKFDDK----EW--------- 287
Query: 574 STSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLR 633
K +K++ E + K + E V D+ + +L+VKNL+ DE L+
Sbjct: 288 YVGKAQKKSER---EQELKSKFEQTAKEAV-------DKYQGLNLYVKNLDDTIDDEKLK 337
Query: 634 KHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALI 693
+ F E G I S KV +++ +S G GF+ F + E A+ ++ G ++ L
Sbjct: 338 ELFSEF---GTITSCKV---MRDPSGISRGSGFVAFSTSEEASRALSEMNGKMIVSKPLY 391
Query: 694 LQLCHAKKDEQVVKKAE 710
+ L K++ + +A+
Sbjct: 392 VALAQRKEERRAKLQAQ 408
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + T+D L+ F + G IT A +MR DGKS+ F FI F T ++A +A++ N
Sbjct: 219 VYVKNLSESTTDDELKKVFGEFGNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESLN 278
Query: 63 KSYLD 67
D
Sbjct: 279 GKKFD 283
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + +++L++ FS+ G IT K+MR G SR F+ F T +EA A+ N
Sbjct: 322 LYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMN 381
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 382 GKMIVSKPLYVALAQR 397
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I +KNL K + L D FS G I K+ +G+S+ + F+ + E+ A+ AI
Sbjct: 126 ANIFIKNLDKSIDNKALHDTFSSFGNILSCKIATDSNGQSKGYGFVQYDNEESAQGAIDK 185
Query: 61 FNKSYLD 67
N ++
Sbjct: 186 LNGMLMN 192
>gi|342878293|gb|EGU79648.1| hypothetical protein FOXB_09931 [Fusarium oxysporum Fo5176]
Length = 759
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 78/142 (54%), Gaps = 10/142 (7%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI +K LP ++E R FS +G EITD KL+ R+ ++G++T ++A +A+K
Sbjct: 4 SRIFIKGLPPSISEADFRKHFSAQGREITDVKLI-----PQRRIGYVGYKTPEDASKAVK 58
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIE 119
YFN+SY+ +I+ E AR + DP + + S + K S K A+R ++
Sbjct: 59 YFNRSYIRMSKIAVETARPISDPALTKGQSAWHSKAASTPSTTIKGNEQPAERESDSSLR 118
Query: 120 KVTEND----DPQLLEFLQVMQ 137
K ++ DP+L EFL VM+
Sbjct: 119 KRKRDEPQPADPKLREFLHVMK 140
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGN-VSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ S R+F++ LP + +E + R+HFS G +++V ++ + I YV Y PE AS
Sbjct: 1 MASSRIFIKGLPPSISEADFRKHFSAQGREITDVKLIPQRR------IGYVGYKTPEDAS 54
Query: 355 RAIEVLDNSIFQGRLLHVMPAR 376
+A++ + S + + V AR
Sbjct: 55 KAVKYFNRSYIRMSKIAVETAR 76
>gi|328852276|gb|EGG01423.1| hypothetical protein MELLADRAFT_39080 [Melampsora larici-populina
98AG31]
Length = 701
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 173/407 (42%), Gaps = 53/407 (13%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V L T TE L E FS G VS + + D T+RS G AYV Y A RA+E L
Sbjct: 59 LYVGELDPTVTEAMLYEIFSMIGPVSSIRVCRDAVTRRSLGYAYVNYLNAADAERALEQL 118
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ S+ + + +M ++ S K T QG +K +E ++A +T A
Sbjct: 119 NYSLIKNKACRIMWSQRDPSLRK------TGQGNIFIKNL--DETIDNKALHDTFAAFGD 170
Query: 421 FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLE 480
+ +++ G + E+ + A++ G + + G++V E
Sbjct: 171 ILSCKVAMDSTGASKGYGFVHYVTAESAEAAIKGVNG-----MQLNDKVVFVGIHVPRRE 225
Query: 481 EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-----LALV 535
K D ++ +KNLP + + EL +MF K+G + + + ++ V
Sbjct: 226 R--QAKIDEVRAHFTNLYIKNLPTEVTTEELNEMFSKYGPVTSAAVQADESGKHRGFGFV 283
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDA--KR 593
+ A+ A + L K YKG LY+ A V E DA +R
Sbjct: 284 NYENHESASKAVEALHDKDYKGNILYVARAQKRV------------------ERDAELRR 325
Query: 594 ALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKH 653
A +Q+ E + + +L++KNL+ + DE L+ F + G I S KV
Sbjct: 326 AHEQQKYETTL-------KYQGVNLYIKNLDDEYDDEKLQAEF---LPFGTITSCKV--- 372
Query: 654 LKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
+K+ K VS GFGF+ F + + AT ++ G +L L + L K
Sbjct: 373 MKDDKGVSRGFGFVCFSAPDEATKAVAEMNGKMLGSKPLYVSLAQRK 419
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
+ + +KNLP VT + L + FS+ G +T A + + GK R F F+ + + A +A++
Sbjct: 238 TNLYIKNLPTEVTTEELNEMFSKYGPVTSAAVQADESGKHRGFGFVNYENHESASKAVE 296
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL +++L+ F G IT K+M+ G SR F F+ F EA +A+ N
Sbjct: 343 LYIKNLDDEYDDEKLQAEFLPFGTITSCKVMKDDKGVSRGFGFVCFSAPDEATKAVAEMN 402
Query: 63 KSYLDTCRISCEIARK 78
L + + +A++
Sbjct: 403 GKMLGSKPLYVSLAQR 418
>gi|387219557|gb|AFJ69487.1| putative rna-binding protein 19, partial [Nannochloropsis gaditana
CCMP526]
Length = 136
Score = 83.6 bits (205), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 270 GEEDANGEIVDPGNPSSSS-KDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEV 328
GEE +G PSS +V +GRLF+RNLP++AT ++L E FG V+++
Sbjct: 28 GEEREDGGARKASVPSSQELSRPAPDVGVTGRLFLRNLPFSATTEDLEELLRPFGPVADM 87
Query: 329 HIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
H+ +D D R KG A+ + IPE A RA+E LD FQGRLLHV+ A+
Sbjct: 88 HLPLD-DAHRPKGFAFASFLIPEDAVRAMEALDRRTFQGRLLHVLAAQ 134
>gi|159163366|pdb|1WHX|A Chain A, Solution Structure Of The Second Rna Binding Domain From
Hypothetical Protein Bab23448
Length = 111
Score = 83.2 bits (204), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 53/85 (62%)
Query: 496 VFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRY 555
V L KNLP + E+ + F +FGSL +V+LP A+V FLEP+EA AF+ LAY ++
Sbjct: 12 VILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKF 71
Query: 556 KGVPLYLEWAPSDVLSQSSTSKGNQ 580
VPLYLEWAP V + K +Q
Sbjct: 72 HHVPLYLEWAPIGVFGAAPQKKDSQ 96
>gi|302844953|ref|XP_002954016.1| hypothetical protein VOLCADRAFT_82578 [Volvox carteri f.
nagariensis]
gi|300260828|gb|EFJ45045.1| hypothetical protein VOLCADRAFT_82578 [Volvox carteri f.
nagariensis]
Length = 620
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 180/430 (41%), Gaps = 90/430 (20%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY--AI-PES 352
L + L+V +L TE +L E FS G V+ + + D T+RS G AYV Y A+ P++
Sbjct: 18 LTNSSLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTRRSLGYAYVNYNSALDPQA 77
Query: 353 ASRAIEVLDNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTK 395
A RA+E L+ + G+ + +M P+ K KS D + LH++ S K
Sbjct: 78 AERAMETLNYHVLNGKPMRIMWSHRDPSARKSGVGNIFIKNLDKSIDAKALHDTFSAFGK 137
Query: 396 TLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIA 455
L + A++A+G +K + + D+ A D A++
Sbjct: 138 ILSC-----KVATDANGVSKGYGFVHFE--------------------DQAAADRAIQTV 172
Query: 456 LGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMF 515
+K + V V ++ A + G +VF VKNLP + + EL+KM
Sbjct: 173 ---------NQKEIEGKIVYVGPFQK-RADRPQGKDVYTNVF-VKNLPAELGDDELSKMA 221
Query: 516 GKFGSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
+FG + ++ S+K + F + AA + L K G LY
Sbjct: 222 TEFGEVTSAVVMKDEKGSSKGFGFINFKDAECAAKCVEALNDKEIGGKVLY--------- 272
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDE 630
+ +K + + A+L Q++E + + +L+VKNL + D+
Sbjct: 273 ----AGRAQKKTE--------REAMLRQKVEESKQERY--LKYQGMNLYVKNLADEVDDD 318
Query: 631 NLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGH 690
LR F G I S KV +K+ S GFGF+ F S + AT ++ G ++ G
Sbjct: 319 ALRDLF---TSCGTITSCKV---MKDTSGKSKGFGFVCFTSHDEATRAVTEMNGKMVKGK 372
Query: 691 ALILQLCHAK 700
L + L K
Sbjct: 373 PLYVALAQRK 382
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL V +D LRD F+ G IT K+M+ GKS+ F F+ F + EA A+ N
Sbjct: 306 LYVKNLADEVDDDALRDLFTSCGTITSCKVMKDTSGKSKGFGFVCFTSHDEATRAVTEMN 365
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNLP + +D L ++ GE+T A +M+ + G S+ F FI F+ + A + ++
Sbjct: 201 TNVFVKNLPAELGDDELSKMATEFGEVTSAVVMKDEKGSSKGFGFINFKDAECAAKCVEA 260
Query: 61 FN 62
N
Sbjct: 261 LN 262
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 198/449 (44%), Gaps = 91/449 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + +L + F++ G V V + D T+RS G YV ++ P+ A+RA++VL
Sbjct: 37 LYVGDLDQNVNDSQLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNFSNPQDAARALDVL 96
Query: 361 DNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ + R + +M P+ K K+ D + LH++ S L
Sbjct: 97 NFTPLNNRSIRIMYSHRDPSLRKSGTANIFIKNLDKAIDHKALHDTFSSFGLILSC---- 152
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVEN-IARKHGVSKSDLLDREANDLAVRIALGETQVI 462
+ A++ASG +K + + + +N I + +G+ +D ++ +G
Sbjct: 153 -KIATDASGLSKGYGFVQFDNEEAAQNAIDKLNGMLIND----------KQVYVGHFLRK 201
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
+ + AL+ KT + N+V+ VKNL +++ EL FG++G++
Sbjct: 202 QDRENALS---------------KT----KFNNVY-VKNLSESTTDEELMINFGEYGTIT 241
Query: 523 KVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
++ ++ V F P +AA A +GL K++ EW
Sbjct: 242 SALIMRDADGKSRCFGFVNFENPDDAAKAVEGLNGKKFDDK----EW------------- 284
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADID--PDRVESRSLFVKNLNFKTCDENLRKH 635
VG+ K++ EQ+L+G + I D+ +L++KNL+ DE L++
Sbjct: 285 -------YVGKAQ-KKSEREQELKGRFEQSIKEAADKYPGLNLYLKNLDDTISDEKLKEM 336
Query: 636 FGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
F ++ G I S KV +++ +S G GF+ F + E AT ++ G + G L +
Sbjct: 337 FADY---GTITSCKV---MRDPTGISRGSGFVAFSTPEEATRALGEMNGKMFAGKPLYVA 390
Query: 696 LCHAKKDEQVVKKAEKDKSSTKLLVRNVA 724
L K++ + +A+ + + +VA
Sbjct: 391 LAQRKEERRARLQAQFSQMRPVAITPSVA 419
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + T++ L F + G IT A +MR DGKSR F F+ F +A +A++ N
Sbjct: 216 VYVKNLSESTTDEELMINFGEYGTITSALIMRDADGKSRCFGFVNFENPDDAAKAVEGLN 275
Query: 63 KSYLD 67
D
Sbjct: 276 GKKFD 280
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL +++++L++ F+ G IT K+MR G SR F+ F T +EA A+ N
Sbjct: 319 LYLKNLDDTISDEKLKEMFADYGTITSCKVMRDPTGISRGSGFVAFSTPEEATRALGEMN 378
Query: 63 KSYLDTCRISCEIARK 78
+ +A++
Sbjct: 379 GKMFAGKPLYVALAQR 394
>gi|403169797|ref|XP_003889581.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168424|gb|EHS63645.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 715
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 175/413 (42%), Gaps = 65/413 (15%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V L T TE L E FS G V+ + + D T+RS G AYV Y A RA+E L
Sbjct: 86 LYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADAERALEQL 145
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ S+ + + +M ++ S K T QG +K E + + KA +
Sbjct: 146 NYSLIKNKACRIMWSQRDPSLRK------TGQGNIFIKNLDE--------TIDNKALHDT 191
Query: 421 FMR-PDTVVENIAR-KHGVSKS----DLLDREANDLAVRIALGETQVIAETKKALTNAGV 474
F D + +A +HG SK + E+ + A++ G + + G+
Sbjct: 192 FAAFGDILSCKVATDEHGASKGYGFVHYVTGESAEAAIKGVNG-----MQLNDKVVFVGI 246
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----T 529
+V + K D ++ +KNLP +++ EL ++FGKFG + + S
Sbjct: 247 HVPRRDR--QAKIDEVRSQFTNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEHGKH 304
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH 589
+ V + A+ A L K YKG LY+ A Q T E
Sbjct: 305 RGFGFVNYENHESASKAVDALHDKDYKGNVLYVARA------QKRT------------ER 346
Query: 590 DA--KRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS 647
DA K+A +Q+ E + + +L+VKNL+ + DE L+ F G I S
Sbjct: 347 DAELKKAHEQQKYETTL-------KYQGVNLYVKNLDDEYDDEKLQNEF---TPFGTITS 396
Query: 648 VKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
KV +K+ K S GFGF+ F S + AT ++ G +L L + L K
Sbjct: 397 CKV---MKDEKGTSKGFGFVCFSSPDEATKAVAEMNGKMLGSKPLYVSLAQRK 446
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL +++L++ F+ G IT K+M+ + G S+ F F+ F + EA +A+ N
Sbjct: 370 LYVKNLDDEYDDEKLQNEFTPFGTITSCKVMKDEKGTSKGFGFVCFSSPDEATKAVAEMN 429
Query: 63 KSYLDTCRISCEIARK 78
L + + +A++
Sbjct: 430 GKMLGSKPLYVSLAQR 445
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ + +KNLP T + L + F + G IT A + + GK R F F+ + + A +A+
Sbjct: 265 TNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEHGKHRGFGFVNYENHESASKAV 322
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + + L D F+ G+I K+ + G S+ + F+ + T + AE AIK N
Sbjct: 174 IFIKNLDETIDNKALHDTFAAFGDILSCKVATDEHGASKGYGFVHYVTGESAEAAIKGVN 233
Query: 63 KSYLD 67
L+
Sbjct: 234 GMQLN 238
>gi|307103841|gb|EFN52098.1| hypothetical protein CHLNCDRAFT_59028 [Chlorella variabilis]
Length = 634
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 175/424 (41%), Gaps = 91/424 (21%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAI---PESASRAI 357
L+V +L TE +L E FS+ G V+ + + D T+RS G AYV Y P +A RA+
Sbjct: 40 LYVGDLDRDVTEAQLFEVFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSVLDPAAAERAL 99
Query: 358 EVLDNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQR 400
+ L+ + GR + +M PA K +S D + LH++ S L +
Sbjct: 100 DQLNYTPLVGRPMRIMWSHRDPAFRKSGVGNIFIKNLDRSVDNKALHDTFSAFGNILSCK 159
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
++ K G +K + + D E+ LA+ G
Sbjct: 160 VAQDLK-----GESKGYGFVHFEKD--------------------ESARLAIEKVNG--- 191
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
++ E KK V V S +D + +VF VKNL S+ E+ MF + G+
Sbjct: 192 MLLEGKK------VYVGPFLRRSERSSDSEVKFTNVF-VKNLDEAVSDDEVKAMFAEHGT 244
Query: 521 LDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
++ I+ +K + F EP +AA+A + L K LY+ A
Sbjct: 245 VNSCIIMRDDEGKSKGFGFINFEEPEQAASAVQALNGKDVNCKELYVGRA---------- 294
Query: 576 SKGNQKNDAVVGEHDAKR-ALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRK 634
+ A+R A+L + E + I + + +L+VKNL+ DE LR
Sbjct: 295 ------------QKKAEREAMLRAKFEELRSERI--AKYQGMNLYVKNLHDDIDDETLRT 340
Query: 635 HFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALIL 694
F + G I S KV + + S GFGF+ + S E AT ++ G ++ G + +
Sbjct: 341 EFSQF---GTITSAKV---MVDSAGKSRGFGFVCYASPEEATRAVTEMNGRMIKGKPIYV 394
Query: 695 QLCH 698
L
Sbjct: 395 ALAQ 398
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 133/317 (41%), Gaps = 47/317 (14%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G +F++NL + L + FS FGN+ + D + SKG +V + ESA AIE
Sbjct: 129 GNIFIKNLDRSVDNKALHDTFSAFGNILSCKVAQDLKGE-SKGYGFVHFEKDESARLAIE 187
Query: 359 VLDNSIFQGRLLHVMPA--RHKKSSDKQELHNSTSQGTKTLKQR-REEERKASEASGNTK 415
++ + +G+ ++V P R ++SSD + T+ K L + ++E KA A T
Sbjct: 188 KVNGMLLEGKKVYVGPFLRRSERSSDSEV--KFTNVFVKNLDEAVSDDEVKAMFAEHGT- 244
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALG------ETQVIAETKKAL 469
+ + MR D + G + + E AV+ G E V KKA
Sbjct: 245 VNSCIIMRDDE-----GKSKGFGFINFEEPEQAASAVQALNGKDVNCKELYVGRAQKKAE 299
Query: 470 TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD--KVILP 527
A + + EE + + + N VKNL D + L F +FG++ KV++
Sbjct: 300 REAMLR-AKFEELRSERIAKYQGMN--LYVKNLHDDIDDETLRTEFSQFGTITSAKVMVD 356
Query: 528 S---TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDA 584
S ++ V + P EA A + + KG P+Y+ A
Sbjct: 357 SAGKSRGFGFVCYASPEEATRAVTEMNGRMIKGKPIYV---------------------A 395
Query: 585 VVGEHDAKRALLEQQLE 601
+ D +RA LEQQ +
Sbjct: 396 LAQRRDVRRAQLEQQYQ 412
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ++ LR FSQ G IT AK+M GKSR F F+ + + +EA A+ N
Sbjct: 324 LYVKNLHDDIDDETLRTEFSQFGTITSAKVMVDSAGKSRGFGFVCYASPEEATRAVTEMN 383
Query: 63 KSYLDTCRISCEIARK 78
+ I +A++
Sbjct: 384 GRMIKGKPIYVALAQR 399
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + V++D ++ F++ G + +MR +GKS+ F FI F ++A A++
Sbjct: 219 TNVFVKNLDEAVSDDEVKAMFAEHGTVNSCIIMRDDEGKSKGFGFINFEEPEQAASAVQA 278
Query: 61 FN 62
N
Sbjct: 279 LN 280
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 193/449 (42%), Gaps = 91/449 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L T+ +L + F++ G V V + D ++RS G YV Y+ P ASRA++VL
Sbjct: 31 LYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRALDVL 90
Query: 361 DNSIFQGRLLHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQRREE 403
+ + G + VM P+ K S D + LH++ S L +
Sbjct: 91 NFTPLNGNPIRVMYSHRDPSVRKSGSGNIFIKNLDKAIDHKALHDTFSAFGSILSCK--- 147
Query: 404 ERKASEASGNTKAWNSLFMRPDT---VVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
A+++SG +K + F++ DT ++ I + +G+ LL+ + + + E +
Sbjct: 148 --VATDSSGQSKGFG--FVQFDTEEAALKAIEKLNGM----LLNDKQVFVGPFLRKQERE 199
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
++E K N+VF VKNL +SE +L MFG+FG
Sbjct: 200 SVSEKTKF-------------------------NNVF-VKNLAETTSEEDLKNMFGEFGP 233
Query: 521 LDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
+ V++ +K V F +AA + + L K+ G EW
Sbjct: 234 ITSVVVMRDGEGKSKCFGFVNFENADDAARSVEALNGKKVDGK----EW---------YV 280
Query: 576 SKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKH 635
K +K++ V ++ EQ ++ D + + +L+VKNL+ D+ L++
Sbjct: 281 GKAQKKSEREV----ELKSRFEQSVKEAAD------KYQGANLYVKNLDDSIDDDKLKEL 330
Query: 636 FGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
F G I S KV +++ +S G GF+ F S E A ++ G ++ L +
Sbjct: 331 FTGF---GTITSCKV---MRDPNGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPLYVA 384
Query: 696 LCHAKKDEQVVKKAEKDKSSTKLLVRNVA 724
L K+D + +A+ + + +VA
Sbjct: 385 LAQRKEDRRARLQAQFSQMQPMAMASSVA 413
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + +D+L++ F+ G IT K+MR +G SR F+ F + +EA A+
Sbjct: 311 ANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAE 370
Query: 61 FNKSYLDTCRISCEIARK 78
N + + + +A++
Sbjct: 371 MNGRMIVSKPLYVALAQR 388
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + +E+ L++ F + G IT +MR +GKS+ F F+ F +A +++ N
Sbjct: 210 VFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFENADDAARSVEALN 269
Query: 63 KSYLD 67
+D
Sbjct: 270 GKKVD 274
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ L+V+NL + +D+L+E F+ FG ++ ++ D + S+G +V ++ PE A+RA
Sbjct: 309 QGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGI-SRGSGFVAFSSPEEAARA 367
Query: 357 IEVLDNSIFQGRLLHVMPARHKK 379
+ ++ + + L+V A+ K+
Sbjct: 368 LAEMNGRMIVSKPLYVALAQRKE 390
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL K + L D FS G I K+ G+S+ F F+ F TE+ A +AI+ N
Sbjct: 119 IFIKNLDKAIDHKALHDTFSAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLN 178
Query: 63 KSYLD 67
L+
Sbjct: 179 GMLLN 183
Score = 42.4 bits (98), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG +F++NL L + FS FG++ + D + +SKG +V + E+A +AI
Sbjct: 116 SGNIFIKNLDKAIDHKALHDTFSAFGSILSCKVATDS-SGQSKGFGFVQFDTEEAALKAI 174
Query: 358 EVLDNSIFQGRLLHVMPARHKKS----SDKQELHN 388
E L+ + + + V P K+ S+K + +N
Sbjct: 175 EKLNGMLLNDKQVFVGPFLRKQERESVSEKTKFNN 209
>gi|448088433|ref|XP_004196543.1| Piso0_003765 [Millerozyma farinosa CBS 7064]
gi|448092564|ref|XP_004197574.1| Piso0_003765 [Millerozyma farinosa CBS 7064]
gi|359377965|emb|CCE84224.1| Piso0_003765 [Millerozyma farinosa CBS 7064]
gi|359378996|emb|CCE83193.1| Piso0_003765 [Millerozyma farinosa CBS 7064]
Length = 751
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 200/474 (42%), Gaps = 64/474 (13%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ V+++P T + L +FFSQ + A ++ + +SR F F+ F + +A A+
Sbjct: 26 LFVRSIPLDATSEELSEFFSQFAPVKHAVIVTDSNHESRGFGFVSFALDDDALTALVESK 85
Query: 63 KSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAA---KRGEKKTIE 119
K+ + ++A+ R K + +E EK PV A KR + I
Sbjct: 86 KAKFKGRVLKIDVAK------------RRERKDKDRSTETEKKPVKAPSVEKRRARLIIR 133
Query: 120 ------KVTENDDPQLLEFLQVMQ---PRVKSKMWANDTLIGLMADQKAK---VSENISQ 167
K E P ++ V PR K + +M Q A V E++
Sbjct: 134 NLPWSCKNAEELKPLFSKYGAVFDAYIPRKKGGRMCGFAFV-VMKKQSAAEKAVKESVGL 192
Query: 168 AIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESED 227
I G E ++ V+ K I +++A + +E ++ + K+ SD SED
Sbjct: 193 KIHGREVAVDFAVEKSKWEEIKETEAENDESESEDEEDANE-----KQEKETSSDDGSED 247
Query: 228 DSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSS 287
D++ D +D ++ + ++D S E I D+ G+E++ + + N
Sbjct: 248 DASNMSDASEDSSDDSDSDSDAESGSESEDIDIENDNGSESEGDEESQ-KAAEKENLDKP 306
Query: 288 SKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
K+ Q +FVRNLPY AT++ L+EHFS+FG V V++K T +KG A+V +
Sbjct: 307 KKNKQDPFT----VFVRNLPYDATKETLKEHFSRFGPVKYALPVIEKSTNLAKGTAFVSF 362
Query: 348 AIPESASRAIE---------------VLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ 392
ES IE V + +FQGR+L V P S D++ H
Sbjct: 363 YKEESYISCIENAPSTSANSLLISDDVSSDYVFQGRVLSVTP-----SVDRESAHK---L 414
Query: 393 GTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE 446
+ L +R+E +A G N + + EN ++KSD+ RE
Sbjct: 415 AERNLSKRKE---ITGKAPGEKDKRNLFLLNEGRITENSKLASFIAKSDMELRE 465
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 8/121 (6%)
Query: 291 VQQEVLESG----RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
V+Q E+G LFVR++P AT +EL E FS+F V IV D + + S+G +V
Sbjct: 12 VEQSSTENGIDRRTLFVRSIPLDATSEELSEFFSQFAPVKHAVIVTDSNHE-SRGFGFVS 70
Query: 347 YAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERK 406
+A+ + A A+ + F+GR+L + A+ ++ DK ST K +K E+R+
Sbjct: 71 FALDDDALTALVESKKAKFKGRVLKIDVAKRRERKDKD---RSTETEKKPVKAPSVEKRR 127
Query: 407 A 407
A
Sbjct: 128 A 128
>gi|326516828|dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 744
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 186/433 (42%), Gaps = 87/433 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + + +L + F++ G V V + D +++S G AYV Y P A+RA+E+L
Sbjct: 127 LYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARALEML 186
Query: 361 DNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ + GR + +M P+ K KS D + LH++ L +
Sbjct: 187 NFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALHDTFCVFGNILSCK--- 243
Query: 404 ERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI 462
A++ +G +K + + + R + I + +G+ +D
Sbjct: 244 --VATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMND--------------------- 280
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
KK V + + G + N+V+ VKNL ++E +L ++FGKFG++
Sbjct: 281 ---KKVYVGPFVRKQERD-----NSPGSVKFNNVY-VKNLAETTTEDDLKEIFGKFGTIT 331
Query: 523 KVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
V++ +K V F P EAA A + L K++ EW +
Sbjct: 332 SVVVMRDGDGRSKCFGFVNFESPDEAALAVQDLNGKKFSDK----EW---------YVGR 378
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
+K++ E + K E+ L+ D+ ++ +L++KNL+ DE LR+ F
Sbjct: 379 AQKKSER---EMELKEK-FEKNLQEAA------DKYQNTNLYLKNLDDTVDDEKLRELFA 428
Query: 638 EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
E G I S KV +++ S G GF+ F S + A+ ++ ++ L + L
Sbjct: 429 EF---GTITSCKV---MRDSNGASRGSGFVAFKSADDASRALAEMNNKMVGNKPLYVALA 482
Query: 698 HAKKDEQVVKKAE 710
K+D + +A+
Sbjct: 483 QRKEDRKARLQAQ 495
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + TED L++ F + G IT +MR DG+S+ F F+ F + EA A++ N
Sbjct: 306 VYVKNLAETTTEDDLKEIFGKFGTITSVVVMRDGDGRSKCFGFVNFESPDEAALAVQDLN 365
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KNL V +++LR+ F++ G IT K+MR +G SR F+ F++ +A A+
Sbjct: 407 TNLYLKNLDDTVDDEKLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDASRALAE 466
Query: 61 FNKSYLDTCRISCEIARK 78
N + + +A++
Sbjct: 467 MNNKMVGNKPLYVALAQR 484
>gi|363749721|ref|XP_003645078.1| hypothetical protein Ecym_2541 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888711|gb|AET38261.1| Hypothetical protein Ecym_2541 [Eremothecium cymbalariae
DBVPG#7215]
Length = 675
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 173/414 (41%), Gaps = 83/414 (20%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ V+N+P T+ L DFFSQ + A +++ DG SR F F+ F +++ + A+
Sbjct: 18 LFVRNIPFTATDAELTDFFSQFAPLKHAIIVKDGDGNSRGFGFVSFAVDEDTQTALNEGR 77
Query: 63 KSYLDTCRISCEIARKVGDPNMPRPWSRYSLK-----------KEKEVSEDEKNPVLAAK 111
K + +IA++ R S+ S ++K V ED + ++
Sbjct: 78 KMKFQGRLLRVDIAKR-------RERSKKSEGDEGEGGKETASRDKTVEEDSSDAMM--- 127
Query: 112 RGEKKTIEKV-------TENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSEN 164
+G+ K I + E F V++ + K + L G K++ N
Sbjct: 128 KGKPKLIIRNMPWSCRDAEKLKKIFSRFGTVVETTIPRKR--DGRLCGFAFVTMKKLA-N 184
Query: 165 ISQAIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSE 224
+AI+G + +K D +V D A +K+K DY K+ +S
Sbjct: 185 CEKAIEGSK-----GLKIDGRDVAVDF-AVQKNKWE---------DY------KNLQNST 223
Query: 225 SEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNP 284
E D D++G + ND + D E DS E + EI +P N
Sbjct: 224 EEQKEEETKDADEEGALLKSSANDDSSDEENEDDS---------EPEPSNDEEIRNPDNK 274
Query: 285 SSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAY 344
+ + E +F+RN+PY AT++ L EHF++FG V V VVD++T KG A+
Sbjct: 275 PKNRR-------EKFSVFIRNVPYDATQESLEEHFAQFGPVKYVLPVVDRETGLPKGTAF 327
Query: 345 VLYAIPESASRAI---------------EVLDNSIFQGRLLHVMPARHKKSSDK 383
+ E+ I +VL +++GR+L + P K S+++
Sbjct: 328 AAFKTQETYDNCIKNAPSVVNTSLLISDDVLPQYVYEGRVLSITPTLDKDSANR 381
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L+ LFVRN+P+TAT+ EL + FS+F + IV D D S+G +V +A+ E
Sbjct: 13 LDQKTLFVRNIPFTATDAELTDFFSQFAPLKHAIIVKDGDGN-SRGFGFVSFAVDEDTQT 71
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDK 383
A+ FQGRLL V A+ ++ S K
Sbjct: 72 ALNEGRKMKFQGRLLRVDIAKRRERSKK 99
>gi|341884731|gb|EGT40666.1| CBN-PAB-2 protein [Caenorhabditis brenneri]
Length = 707
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 178/420 (42%), Gaps = 73/420 (17%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L++ +L TE L E FS G V + + D ++ S G AYV + P A RA++ +
Sbjct: 64 LYIGDLHGDVTESMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 123
Query: 361 DNSIFQGRLLHVM-----PARHKKSSDK-------QELHNSTSQGTKTLKQRREEERKAS 408
+ I GR + +M PA + + + + N + T +L + A+
Sbjct: 124 NFEIIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSIYDTFSLFGNILSCKVAT 183
Query: 409 EASGNTKAWNSLFMRPDTVVEN-IARKHGVSKSDLLDREANDLAVRIALGETQVIAETKK 467
+ GN+K + + + + I + +G+ SD ++ +G+ Q A+ K
Sbjct: 184 DDDGNSKGYGFVHFETEASAQTAIEKVNGMLLSD----------KKVFVGKFQPRAQRMK 233
Query: 468 ALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP 527
L + GLK +N VF VKN E +L +MF K+G ++ ++
Sbjct: 234 ELGES----------------GLKYTN-VF-VKNFGEHLDEAKLKEMFSKYGEINSAVVM 275
Query: 528 S-----TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN 582
+ K V + +P A+ A L +G L L S + +K+
Sbjct: 276 TDAEGKPKGFGFVAYADPEAASKAVDDLNESILEGTELKL-----------SVCRAQKKS 324
Query: 583 DAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKE 642
+ + A L+++ E + + R + +L+VKN+ + DE LR HF +
Sbjct: 325 E--------RSAELKRKYEALKQERV--QRYQGVNLYVKNIEEELTDEGLRAHFAQF--- 371
Query: 643 GRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD 702
G I S KV +NG+ S GFGF+ F+ E AT ++ ++ L + L K+D
Sbjct: 372 GTITSAKVMVD-ENGR--SKGFGFVCFEKPEEATAAVTEMNSKMIGAKPLYVALAQRKED 428
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V+N+ T++ LR HF++FG ++ ++VD++ RSKG +V + PE A+ A+ +
Sbjct: 350 LYVKNIEEELTDEGLRAHFAQFGTITSAKVMVDENG-RSKGFGFVCFEKPEEATAAVTEM 408
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
++ + + L+V A+ K+ Q SQ + L R ++ A G T+ +
Sbjct: 409 NSKMIGAKPLYVALAQRKEDRRAQ----LASQYMQRLATLRMGQQAAGGVPGMTQIY 461
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKN+ + +T++ LR F+Q G IT AK+M ++G+S+ F F+ F +EA A+ N
Sbjct: 350 LYVKNIEEELTDEGLRAHFAQFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTEMN 409
Query: 63 KSYLDTCRISCEIARK 78
+ + +A++
Sbjct: 410 SKMIGAKPLYVALAQR 425
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN +++ E +L++ FS+ GEI A +M +GK + F F+ + + A +A+
Sbjct: 243 TNVFVKNFGEHLDEAKLKEMFSKYGEINSAVVMTDAEGKPKGFGFVAYADPEAASKAVDD 302
Query: 61 FNKSYLDTCRISCEIAR 77
N+S L+ + + R
Sbjct: 303 LNESILEGTELKLSVCR 319
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + + + D FS G I K+ DG S+ + F+ F TE A+ AI+ N
Sbjct: 152 IFIKNLDRVIDNKSIYDTFSLFGNILSCKVATDDDGNSKGYGFVHFETEASAQTAIEKVN 211
Query: 63 KSYL 66
L
Sbjct: 212 GMLL 215
>gi|303390218|ref|XP_003073340.1| polyadenylate binding protein 2 [Encephalitozoon intestinalis ATCC
50506]
gi|303302486|gb|ADM11980.1| polyadenylate binding protein 2 [Encephalitozoon intestinalis ATCC
50506]
Length = 420
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 171/411 (41%), Gaps = 87/411 (21%)
Query: 287 SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
+S+ ++ + S ++F+RN+P A E + + F ++G V EV ++ + KG AYV
Sbjct: 91 TSESEERMIRYSRKIFIRNIPADADERFISDVFKEYGEVEEVGLLPRHE---GKG-AYVK 146
Query: 347 YAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERK 406
++ E A A + +L+ + R + D+ E +RE E
Sbjct: 147 FSKGECALEAYR-------KVKLIGGVKPRMRPWKDRGE--------------KREHEH- 184
Query: 407 ASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETK 466
+N+LF ++VV+ I + DL+D DL R+A ET ++ ETK
Sbjct: 185 ----------YNTLFFNFESVVKKICESERIGIKDLVDVNDKDLGARMARAETHLVQETK 234
Query: 467 KALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVIL 526
+ L N G+ + L G D K +V+N+ EL K + K+ +
Sbjct: 235 EFLENNGIYLDHL----TGSVDRKK-----LIVRNM-------ELMKCLDLVDNGCKISI 278
Query: 527 PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVV 586
+K LAL+ F +A +K L+ +R + +Y E+AP K +
Sbjct: 279 APSKCLALLKFDSEEDAKRCYKKLSLRRMREHVIYCEYAP--------ICNAPSKREEPP 330
Query: 587 GEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE-HIKEGRI 645
EH K++ R + L ++N+ F+ E++RK F H+ RI
Sbjct: 331 KEHTEKKS-----------------RKGTNKLLIRNVPFQASKEDVRKIFDSFHVVNVRI 373
Query: 646 LSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDL-QGTILDGHALILQ 695
VK+ + S GF F+ F S E + T L G L+L+
Sbjct: 374 ---PVKR-----EGTSRGFCFVTFQSPEEVSAAIEYFGSSTHLYGRRLVLE 416
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
RI VKNLP+ T++ + FS+ G+ITD ++ + GK R+ FIG+ E++ EAIKY
Sbjct: 10 RIVVKNLPESTTKEEIEKEFSKHGKITDVFMVNNEQGKFRRICFIGYIEEKDGMEAIKYR 69
Query: 62 NKSYLDTCRISCEIAR 77
+ S +I CE +
Sbjct: 70 DGSMFKNHKIRCETTK 85
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ V+NLP + T++E+ + FSK G +++V +V+ + + + I ++ Y + AI+
Sbjct: 10 RIVVKNLPESTTKEEIEKEFSKHGKITDV-FMVNNEQGKFRRICFIGYIEEKDGMEAIKY 68
Query: 360 LDNSIFQ 366
D S+F+
Sbjct: 69 RDGSMFK 75
>gi|358334962|dbj|GAA31742.2| polyadenylate-binding protein, partial [Clonorchis sinensis]
Length = 738
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 181/436 (41%), Gaps = 86/436 (19%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L ATE L FS+ G V I D T+ S G YV + P+ A RA+E L
Sbjct: 3 LYVGDLHPLATEALLYSKFSEIGTVLSARICRDLATRNSLGYGYVNFEEPKDAERALENL 62
Query: 361 DNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ F GR + +M P+ K K+ D+++L+++ S K L
Sbjct: 63 NYESFMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKTIDQKQLYDTFSFIGKILSC---- 118
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVEN-IARKHGVSKSDLLDREANDLAVRIALGETQVI 462
+ A + GN+K + + + E I + +G+ ND V +
Sbjct: 119 -KIAMDEHGNSKGYGFVHFEKEECAERAIEKINGMM--------INDRVVYV-------- 161
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
G + S + SA G R N+++ VKN P D+++ +L MF +FG +
Sbjct: 162 ----------GKFIPSSDRKSA---SGKLRFNNIY-VKNFPPDTTDEKLRDMFSEFGEIK 207
Query: 523 KVIL---P--STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
+ P +K V F +P A A + + K G LY S+
Sbjct: 208 SCCVEKNPEGKSKGFGFVCFHDPDHAEQAVRVMHGKEINGRALY-------------ASR 254
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
+K + + + K+ L +Q+ E ++ V +L+VKNL+ DE L++ F
Sbjct: 255 AQRKEER---QEELKQRLEKQRAERLS------KYVPGVNLYVKNLDDNIDDERLKEAFS 305
Query: 638 EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
+ G I S KV + + S GFGF+ F E A ++ T++ L + L
Sbjct: 306 HY---GPITSAKV---MTDANGRSKGFGFVCFTQPEQAARAVTEMNATLVGSKPLYVALA 359
Query: 698 HAKKDEQVVKKAEKDK 713
K+D + AE +
Sbjct: 360 QRKEDRRAKLIAEHQQ 375
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 16/123 (13%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTK-RSKGI 342
PSS K + L ++V+N P T+++LR+ FS+FG + V+K+ + +SKG
Sbjct: 166 PSSDRKSASGK-LRFNNIYVKNFPPDTTDEKLRDMFSEFGEIKSC--CVEKNPEGKSKGF 222
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRRE 402
+V + P+ A +A+ V+ GR L+ +R ++ ++QE LKQR E
Sbjct: 223 GFVCFHDPDHAEQAVRVMHGKEINGRALYA--SRAQRKEERQE----------ELKQRLE 270
Query: 403 EER 405
++R
Sbjct: 271 KQR 273
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I VKN P T+++LRD FS+ GEI + + +GKS+ F F+ F AE+A++ +
Sbjct: 182 IYVKNFPPDTTDEKLRDMFSEFGEIKSCCVEKNPEGKSKGFGFVCFHDPDHAEQAVRVMH 241
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ++RL++ FS G IT AK+M +G+S+ F F+ F ++A A+ N
Sbjct: 286 LYVKNLDDNIDDERLKEAFSHYGPITSAKVMTDANGRSKGFGFVCFTQPEQAARAVTEMN 345
Query: 63 KSYLDTCRISCEIARK 78
+ + + + +A++
Sbjct: 346 ATLVGSKPLYVALAQR 361
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+++VKN T DE LR F E G I S V+K N + S GFGF+ F + A
Sbjct: 181 NIYVKNFPPDTTDEKLRDMFSEF---GEIKSCCVEK---NPEGKSKGFGFVCFHDPDHAE 234
Query: 677 NVCRDLQGTILDGHALILQLCHAK--KDEQVVKKAEKDKS 714
R + G ++G AL K + E++ ++ EK ++
Sbjct: 235 QAVRVMHGKEINGRALYASRAQRKEERQEELKQRLEKQRA 274
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL K + + +L D FS G+I K+ + G S+ + F+ F E+ AE AI+ N
Sbjct: 91 IFIKNLDKTIDQKQLYDTFSFIGKILSCKIAMDEHGNSKGYGFVHFEKEECAERAIEKIN 150
Query: 63 KSYLD 67
++
Sbjct: 151 GMMIN 155
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G +F++NL T + +L + FS G + I +D+ SKG +V + E A RAIE
Sbjct: 89 GNIFIKNLDKTIDQKQLYDTFSFIGKILSCKIAMDEHGN-SKGYGFVHFEKEECAERAIE 147
Query: 359 VLDNSIFQGRLLHV---MPARHKKSS 381
++ + R+++V +P+ +KS+
Sbjct: 148 KINGMMINDRVVYVGKFIPSSDRKSA 173
>gi|302923914|ref|XP_003053775.1| hypothetical protein NECHADRAFT_30669 [Nectria haematococca mpVI
77-13-4]
gi|256734716|gb|EEU48062.1| hypothetical protein NECHADRAFT_30669 [Nectria haematococca mpVI
77-13-4]
Length = 838
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 19/148 (12%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI +K LP ++E R FS KG EITD KL+ R+ ++G++T +A +A+K
Sbjct: 4 SRIFIKGLPPNISEAEFRKHFSAKGREITDVKLI-----PQRRIGYVGYKTSDDATKAVK 58
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLK------KEKEVSEDEKNPVL----A 109
YFNKSY+ +I+ E AR + DP++ + + K +++ ++P++ A
Sbjct: 59 YFNKSYIRMSKIAVETARPISDPSLLKGQNTSHSKHASAGTGTGTITKGTEHPIVKDSDA 118
Query: 110 AKRGEKKTIEKVTENDDPQLLEFLQVMQ 137
+ R K+ + DP+L EFLQVM+
Sbjct: 119 SSRKRKRDEPQAA---DPKLREFLQVMK 143
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R F G++ +L + D R FAF F T +EAE A+
Sbjct: 714 TKIIIKNLPFQATKKDIRSLFGTYGQLRSVRLPKKADYTPRGFAFADFVTPREAENALNA 773
Query: 61 FNKSYL 66
++L
Sbjct: 774 LRDTHL 779
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R F +G + V + D +G A+ + P A A+
Sbjct: 715 KIIIKNLPFQATKKDIRSLFGTYGQLRSVRLPKKADYT-PRGFAFADFVTPREAENALNA 773
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 774 LRDTHLLGRKL 784
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGN-VSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ S R+F++ LP +E E R+HFS G +++V ++ + I YV Y + A+
Sbjct: 1 MASSRIFIKGLPPNISEAEFRKHFSAKGREITDVKLIPQRR------IGYVGYKTSDDAT 54
Query: 355 RAIEVLDNSIFQGRLLHVMPAR 376
+A++ + S + + V AR
Sbjct: 55 KAVKYFNKSYIRMSKIAVETAR 76
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 10/111 (9%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
++KNLP+ +++ ++ +FG +G L V LP + + A F+ P EA A L
Sbjct: 716 IIIKNLPFQATKKDIRSLFGTYGQLRSVRLPKKADYTPRGFAFADFVTPREAENALNALR 775
Query: 552 YKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEG 602
G L L++A ++ + QK VG K AL QQL G
Sbjct: 776 DTHLLGRKLVLDFAEAEAVDAEEEIAKMQKK---VGGQVNKVAL--QQLTG 821
Score = 39.3 bits (90), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+ +KNL F+ +++R FG + G++ SV++ K GF F +F + A N
Sbjct: 716 IIIKNLPFQATKKDIRSLFGTY---GQLRSVRLPK---KADYTPRGFAFADFVTPREAEN 769
Query: 678 VCRDLQGTILDGHALIL 694
L+ T L G L+L
Sbjct: 770 ALNALRDTHLLGRKLVL 786
>gi|224057966|ref|XP_002299413.1| predicted protein [Populus trichocarpa]
gi|222846671|gb|EEE84218.1| predicted protein [Populus trichocarpa]
Length = 58
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 41/47 (87%)
Query: 684 GTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQRK 730
GT+LDGHA ILQLCHA+KDE VKKA KDKSSTKLLVRNVAFEA K
Sbjct: 1 GTVLDGHAHILQLCHAQKDEHAVKKAGKDKSSTKLLVRNVAFEATEK 47
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 192/449 (42%), Gaps = 91/449 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L T+ +L + F++ G V V + D ++RS G YV Y+ P ASRA++VL
Sbjct: 31 LYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRALDVL 90
Query: 361 DNSIFQGRLLHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQRREE 403
+ + G + VM P+ K S D + LH++ S L +
Sbjct: 91 NFTPLNGNPIRVMYSHRDPSVRKSGSGNIFIKNLDKAIDHKALHDTFSAFGSILSCK--- 147
Query: 404 ERKASEASGNTKAWNSLFMRPDT---VVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
A+++SG +K + F++ DT ++ I + +G+ LL+ + + + E +
Sbjct: 148 --VATDSSGQSKGFG--FVQFDTEEAALKAIEKLNGM----LLNDKQVFVGPFLRKQERE 199
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
++E K N+VF VKNL +SE +L MFG+FG
Sbjct: 200 SVSEKTKF-------------------------NNVF-VKNLAETTSEEDLKNMFGEFGP 233
Query: 521 LDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
+ V++ +K V F +AA + + L K+ G EW
Sbjct: 234 ITSVVVMRDGEGKSKCFGFVNFENADDAARSVEALNGKKVDGK----EW---------YV 280
Query: 576 SKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKH 635
K +K++ V ++ EQ ++ D + + +L+VKNL+ D+ L++
Sbjct: 281 GKAQKKSEREV----ELKSRFEQSVKEAAD------KYQGANLYVKNLDDSIDDDKLKEL 330
Query: 636 FGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
F G I S KV +++ +S G GF+ F S E A ++ G ++ L +
Sbjct: 331 FTGF---GTITSCKV---MRDPNGISRGSGFVAFSSPEEAARALAEMNGRMIVSKPLYVA 384
Query: 696 LCHAKKDEQVVKKAEKDKSSTKLLVRNVA 724
L K+D +A+ + + +VA
Sbjct: 385 LAQRKEDRIARLQAQFSQMQPMAMASSVA 413
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + +D+L++ F+ G IT K+MR +G SR F+ F + +EA A+
Sbjct: 311 ANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAE 370
Query: 61 FNKSYLDTCRISCEIARK 78
N + + + +A++
Sbjct: 371 MNGRMIVSKPLYVALAQR 388
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + +E+ L++ F + G IT +MR +GKS+ F F+ F +A +++ N
Sbjct: 210 VFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFENADDAARSVEALN 269
Query: 63 KSYLD 67
+D
Sbjct: 270 GKKVD 274
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ L+V+NL + +D+L+E F+ FG ++ ++ D + S+G +V ++ PE A+RA
Sbjct: 309 QGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGI-SRGSGFVAFSSPEEAARA 367
Query: 357 IEVLDNSIFQGRLLHVMPARHKK 379
+ ++ + + L+V A+ K+
Sbjct: 368 LAEMNGRMIVSKPLYVALAQRKE 390
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL K + L D FS G I K+ G+S+ F F+ F TE+ A +AI+ N
Sbjct: 119 IFIKNLDKAIDHKALHDTFSAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLN 178
Query: 63 KSYLD 67
L+
Sbjct: 179 GMLLN 183
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG +F++NL L + FS FG++ + D + +SKG +V + E+A +AI
Sbjct: 116 SGNIFIKNLDKAIDHKALHDTFSAFGSILSCKVATDS-SGQSKGFGFVQFDTEEAALKAI 174
Query: 358 EVLDNSIFQGRLLHVMPARHKKS----SDKQELHN 388
E L+ + + + V P K+ S+K + +N
Sbjct: 175 EKLNGMLLNDKQVFVGPFLRKQERESVSEKTKFNN 209
>gi|365985359|ref|XP_003669512.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
gi|343768280|emb|CCD24269.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 180/426 (42%), Gaps = 85/426 (19%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V +L + +E L + FS G+VS + + D TK S G AYV + E+ +AI
Sbjct: 39 SASLYVGDLDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKKAI 98
Query: 358 EVLDNSIFQGRLLHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQR 400
E L+ + +GRL +M PA KK S D + L+++ S L
Sbjct: 99 EKLNYTPIKGRLCRIMWSQRDPALRKKGSANIFIKNLHSDIDNKALYDTFSVFGNIL--- 155
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVV-ENIARKHGVSKSDLLDREANDLAVRIALGET 459
+ A++ +G +K + + DT E I +G+ LL+ + + ++ E
Sbjct: 156 --SSKIATDETGKSKGFGFVHFEDDTAAKEAIDALNGM----LLNGQEIFVGPHLSRKER 209
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
S LEE A T+ VKN+ ++++ E ++F K+G
Sbjct: 210 D----------------SQLEESKANFTN--------IYVKNINLETTDEEFTELFSKYG 245
Query: 520 SLDKVILPST-----KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
+ L T K V F +AA A + L ++K L++ S
Sbjct: 246 KVLSAALEKTEDGKLKGFGFVDFENHEDAAKAVEELNGSQFKDQELFV----------SR 295
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRK 634
K ++ + +++A R + +GV +LF+KNL+ DE L++
Sbjct: 296 AQKKYERMQELKKQYEASRLEKMAKYQGV-------------NLFIKNLDDSIDDEKLKE 342
Query: 635 HFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALIL 694
F + G I SV+V + +NGK S GFGF+ F + E AT + I+ G L +
Sbjct: 343 EFAPY---GNITSVRVMR-TENGK--SRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYV 396
Query: 695 QLCHAK 700
+ K
Sbjct: 397 AIAQRK 402
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + +++L++ F+ G IT ++MRT++GKSR F F+ F T +EA +AI N
Sbjct: 326 LFIKNLDDSIDDEKLKEEFAPYGNITSVRVMRTENGKSRGFGFVCFSTPEEATKAITEKN 385
Query: 63 KSYLDTCRISCEIARK 78
+ + + IA++
Sbjct: 386 QQIVAGKPLYVAIAQR 401
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 605 DADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGF 664
D+ ++ + +++VKN+N +T DE + F ++ G++LS ++K ++GK GF
Sbjct: 210 DSQLEESKANFTNIYVKNINLETTDEEFTELFSKY---GKVLSAALEK-TEDGK--LKGF 263
Query: 665 GFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKL 718
GF++F++ E A +L G+ L + A+K + +++ +K +++L
Sbjct: 264 GFVDFENHEDAAKAVEELNGSQFKDQELF--VSRAQKKYERMQELKKQYEASRL 315
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I VKN+ T++ + FS+ G++ A L +T+DGK + F F+ F ++A +A++
Sbjct: 221 TNIYVKNINLETTDEEFTELFSKYGKVLSAALEKTEDGKLKGFGFVDFENHEDAAKAVEE 280
Query: 61 FNKS 64
N S
Sbjct: 281 LNGS 284
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I +KNL + L D FS G I +K+ + GKS+ F F+ F + A+EAI
Sbjct: 128 ANIFIKNLHSDIDNKALYDTFSVFGNILSSKIATDETGKSKGFGFVHFEDDTAAKEAIDA 187
Query: 61 FNKSYLDTCRI 71
N L+ I
Sbjct: 188 LNGMLLNGQEI 198
>gi|403169799|ref|XP_003329214.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168425|gb|EFP84795.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 804
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 175/413 (42%), Gaps = 65/413 (15%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V L T TE L E FS G V+ + + D T+RS G AYV Y A RA+E L
Sbjct: 175 LYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADAERALEQL 234
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ S+ + + +M ++ S K T QG +K E + + KA +
Sbjct: 235 NYSLIKNKACRIMWSQRDPSLRK------TGQGNIFIKNLDE--------TIDNKALHDT 280
Query: 421 FMR-PDTVVENIAR-KHGVSKS----DLLDREANDLAVRIALGETQVIAETKKALTNAGV 474
F D + +A +HG SK + E+ + A++ G + + G+
Sbjct: 281 FAAFGDILSCKVATDEHGASKGYGFVHYVTGESAEAAIKGVNG-----MQLNDKVVFVGI 335
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----T 529
+V + K D ++ +KNLP +++ EL ++FGKFG + + S
Sbjct: 336 HVPRRDR--QAKIDEVRSQFTNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEHGKH 393
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH 589
+ V + A+ A L K YKG LY+ A QK E
Sbjct: 394 RGFGFVNYENHESASKAVDALHDKDYKGNVLYVARA--------------QKRT----ER 435
Query: 590 DA--KRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS 647
DA K+A +Q+ E + + +L+VKNL+ + DE L+ F G I S
Sbjct: 436 DAELKKAHEQQKYETTL-------KYQGVNLYVKNLDDEYDDEKLQNEFTPF---GTITS 485
Query: 648 VKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
KV +K+ K S GFGF+ F S + AT ++ G +L L + L K
Sbjct: 486 CKV---MKDEKGTSKGFGFVCFSSPDEATKAVAEMNGKMLGSKPLYVSLAQRK 535
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL +++L++ F+ G IT K+M+ + G S+ F F+ F + EA +A+ N
Sbjct: 459 LYVKNLDDEYDDEKLQNEFTPFGTITSCKVMKDEKGTSKGFGFVCFSSPDEATKAVAEMN 518
Query: 63 KSYLDTCRISCEIARK 78
L + + +A++
Sbjct: 519 GKMLGSKPLYVSLAQR 534
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ + +KNLP T + L + F + G IT A + + GK R F F+ + + A +A+
Sbjct: 354 TNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEHGKHRGFGFVNYENHESASKAV 411
>gi|406602185|emb|CCH46236.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 652
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 183/423 (43%), Gaps = 85/423 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V L + E L E FS G VS + + D TKRS G AYV Y + +AI+ L
Sbjct: 62 LYVGELEPSINEALLFEIFSPIGQVSSIRVCRDALTKRSLGYAYVNYHNVKDGEKAIDEL 121
Query: 361 DNSIFQGRLLHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQRREE 403
+ S+ +G+ + +M PA+ + D + LH++ S + L
Sbjct: 122 NYSVVKGQPIRIMWSQRDPAKRRNGEGNVFIKNLHPAIDNKALHDTFSAFGRILSC---- 177
Query: 404 ERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI 462
+ A++ G +K + + F P+ I +G+ LL+ + +A + Q
Sbjct: 178 -KVATDNFGQSKGFGFVHFESPEAAQAAIENVNGM----LLNNNEVYVGPHVARRDRQ-- 230
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
S LEE +K +V+ VKN+ ++SE E+ ++F FG++
Sbjct: 231 --------------SKLEEV-------IKSFTNVY-VKNIDLEASEEEVKELFTPFGTVT 268
Query: 523 KVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
L ++ A V + E A + + L + YKG LY+ A K
Sbjct: 269 SFYLEKDAEGKSRGFAFVNYEEHEAAVKSIESLNDQDYKGKKLYVGRA----------QK 318
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
+++ + + +++A R +E +T + + +LFVKNL+ DE L++ F
Sbjct: 319 KSERLEELKKQYEAAR------IEKLT-------KSQGVNLFVKNLDDSIDDEKLKEEFQ 365
Query: 638 EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
G I SVKV ++GK S GFGF+ F S E A+ ++ +L G L + L
Sbjct: 366 SF---GTISSVKVMID-ESGK--SKGFGFVSFSSPEEASRAISEMNQHMLAGKPLYVALA 419
Query: 698 HAK 700
K
Sbjct: 420 QRK 422
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
++F+KNL+ ++ L F GRILS KV + S GFGF+ F+S E A
Sbjct: 149 NVFIKNLHPAIDNKALHDTFSAF---GRILSCKVAT---DNFGQSKGFGFVHFESPEAAQ 202
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
++ G +L+ + + + A++D Q K E KS T + V+N+ EA
Sbjct: 203 AAIENVNGMLLNNNEVYVGPHVARRDRQ-SKLEEVIKSFTNVYVKNIDLEA 252
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + +++L++ F G I+ K+M + GKS+ F F+ F + +EA AI N
Sbjct: 346 LFVKNLDDSIDDEKLKEEFQSFGTISSVKVMIDESGKSKGFGFVSFSSPEEASRAISEMN 405
Query: 63 KSYLDTCRISCEIARK 78
+ L + +A++
Sbjct: 406 QHMLAGKPLYVALAQR 421
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 36/62 (58%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN+ +E+ +++ F+ G +T L + +GKSR FAF+ + + A ++I+
Sbjct: 241 TNVYVKNIDLEASEEEVKELFTPFGTVTSFYLEKDAEGKSRGFAFVNYEEHEAAVKSIES 300
Query: 61 FN 62
N
Sbjct: 301 LN 302
>gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 196/455 (43%), Gaps = 92/455 (20%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
++ L+V +L + + +L + FS+ G+V V + D +T+ S G AYV ++ P A+R
Sbjct: 36 FQATSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAAR 95
Query: 356 AIEVLDNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLK 398
A+E+L+ + G+ + +M P+ K KS D + L+++ S L
Sbjct: 96 ALEMLNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILS 155
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVEN-IARKHGVSKSDLLDREANDLAVRIALG 457
+ A+E SG +K + + + +N I++ +G+ +D
Sbjct: 156 C-----KVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLND---------------- 194
Query: 458 ETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGK 517
KK V E S G + N+V+ VKNL ++E L ++FGK
Sbjct: 195 --------KKVYVGPFVRKQERENVS-----GNPKFNNVY-VKNLSESTTEDNLKEIFGK 240
Query: 518 FGSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ 572
FG + V++ ++ V F P +AA A + L K++ Y+ A
Sbjct: 241 FGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRA------- 293
Query: 573 SSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADID--PDRVESRSLFVKNLNFKT-CD 629
K++ E +L+ + +I D+ + +L++KNL+ D
Sbjct: 294 ------------------QKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDD 335
Query: 630 ENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDG 689
E L++ F + G I S KV + L NG VS G GF+ F S E A+ + G ++
Sbjct: 336 EKLKEIFADF---GTITSCKVMRDL-NG--VSKGSGFVAFKSAEDASRALVAMNGKMIGS 389
Query: 690 HALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVA 724
L + L K++ + +A+ + ++ +VA
Sbjct: 390 KPLYVALAQRKEERRARLQAQFSQMRPMVMPPSVA 424
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + TED L++ F + G IT +MR DGKSR F F+ F +A A++ N
Sbjct: 220 VYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLN 279
Query: 63 KSYLD-----TCR 70
D CR
Sbjct: 280 GKKFDDKEWYVCR 292
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I +KNL K + L D FS G I K+ G+S+ + F+ F E+ A+ AI
Sbjct: 127 ANIFIKNLDKSIDNKALYDTFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISK 186
Query: 61 FNKSYLD 67
N L+
Sbjct: 187 LNGMLLN 193
>gi|308486599|ref|XP_003105496.1| CRE-PAB-2 protein [Caenorhabditis remanei]
gi|308255462|gb|EFO99414.1| CRE-PAB-2 protein [Caenorhabditis remanei]
Length = 730
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 178/420 (42%), Gaps = 73/420 (17%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L++ +L TE L E FS G V + + D ++ S G AYV + P A RA++ +
Sbjct: 57 LYIGDLHPDVTESMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 116
Query: 361 DNSIFQGRLLHVM-----PARHKKSSDK-------QELHNSTSQGTKTLKQRREEERKAS 408
+ + GR + +M PA + + + + N + T +L + A+
Sbjct: 117 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSIYDTFSLFGNILSCKVAT 176
Query: 409 EASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKK 467
+ GN+K + + F + + I + +G+ SD ++ +G+ Q A+ K
Sbjct: 177 DEEGNSKGYGFVHFETEASALTAIEKVNGMLLSD----------KKVFVGKFQPRAQRMK 226
Query: 468 ALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP 527
L + GLK +N VF +KN E +L +MF K+G + ++
Sbjct: 227 ELGES----------------GLKYTN-VF-IKNFGDHLDEKKLTEMFSKYGEITSAVVM 268
Query: 528 S-----TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN 582
+ K V F++P A A L +G L L S + +K+
Sbjct: 269 TDNSGKPKGFGFVAFVDPDAAIKAVDTLNESTLEGTDLKL-----------SVCRAQKKS 317
Query: 583 DAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKE 642
+ + A L+++ E + + R + +L+VKN+ + D+ LR+HF
Sbjct: 318 E--------RTAELKRKYEALKQERV--QRYQGVNLYVKNIEEEMTDDGLREHFANF--- 364
Query: 643 GRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD 702
G I S KV +NG+ S GFGF+ F+ E AT ++ ++ L + L K+D
Sbjct: 365 GSITSAKVMVD-ENGR--SKGFGFVCFEKPEEATAAVTEMNSKMIGAKPLYVALAQRKED 421
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V+N+ T+D LREHF+ FG+++ ++VD++ RSKG +V + PE A+ A+ +
Sbjct: 343 LYVKNIEEEMTDDGLREHFANFGSITSAKVMVDEN-GRSKGFGFVCFEKPEEATAAVTEM 401
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
++ + + L+V A+ +K + +L + Q TL+ ++ +
Sbjct: 402 NSKMIGAKPLYVALAQ-RKEDRRAQLASQYMQRLATLRMGQQTNGVPGMTQIYQQGQQGY 460
Query: 421 FMRPDTVVENIARKHGVS 438
FM+ V + +H ++
Sbjct: 461 FMQNPMAVSHPKHEHNIN 478
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKN+ + +T+D LR+ F+ G IT AK+M ++G+S+ F F+ F +EA A+ N
Sbjct: 343 LYVKNIEEEMTDDGLREHFANFGSITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTEMN 402
Query: 63 KSYLDTCRISCEIARK 78
+ + +A++
Sbjct: 403 SKMIGAKPLYVALAQR 418
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KN ++ E +L + FS+ GEIT A +M GK + F F+ F A +A+
Sbjct: 236 TNVFIKNFGDHLDEKKLTEMFSKYGEITSAVVMTDNSGKPKGFGFVAFVDPDAAIKAVDT 295
Query: 61 FNKSYLDTCRISCEIAR 77
N+S L+ + + R
Sbjct: 296 LNESTLEGTDLKLSVCR 312
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 289 KDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYA 348
K++ + L+ +F++N E +L E FSK+G ++ ++ D ++ + KG +V +
Sbjct: 226 KELGESGLKYTNVFIKNFGDHLDEKKLTEMFSKYGEITSAVVMTD-NSGKPKGFGFVAFV 284
Query: 349 IPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK 383
P++A +A++ L+ S +G L + R +K S++
Sbjct: 285 DPDAAIKAVDTLNESTLEGTDLKLSVCRAQKKSER 319
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 129/313 (41%), Gaps = 61/313 (19%)
Query: 287 SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
S +D +G +F++NL + + FS FGN+ + D++ SKG +V
Sbjct: 131 SQRDPAARRAGNGNIFIKNLDRVIDNKSIYDTFSLFGNILSCKVATDEEGN-SKGYGFVH 189
Query: 347 YAIPESASRAIE------VLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
+ SA AIE + D +F G+ ++ +EL S + T +
Sbjct: 190 FETEASALTAIEKVNGMLLSDKKVFVGKF-------QPRAQRMKELGESGLKYTNVFIKN 242
Query: 401 ---REEERKASEA----------------SGNTKAWNSL-FMRPDTVVENIARKHGVSKS 440
+E+K +E SG K + + F+ PD ++ + +++S
Sbjct: 243 FGDHLDEKKLTEMFSKYGEITSAVVMTDNSGKPKGFGFVAFVDPDAAIKAV---DTLNES 299
Query: 441 DLLDREANDLAVRIALGE--TQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFL 498
L E DL + + + ++ AE K+ ++ A K + ++R V L
Sbjct: 300 TL---EGTDLKLSVCRAQKKSERTAELKR-------------KYEALKQERVQRYQGVNL 343
Query: 499 -VKNLPYDSSEGELAKMFGKFGSLD--KVIL---PSTKTLALVVFLEPVEAAAAFKGLAY 552
VKN+ + ++ L + F FGS+ KV++ +K V F +P EA AA +
Sbjct: 344 YVKNIEEEMTDDGLREHFANFGSITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTEMNS 403
Query: 553 KRYKGVPLYLEWA 565
K PLY+ A
Sbjct: 404 KMIGAKPLYVALA 416
>gi|313234383|emb|CBY24582.1| unnamed protein product [Oikopleura dioica]
Length = 220
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 74/117 (63%), Gaps = 10/117 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
+FVKN+NF T DE+L++ F + I G+++ + K L+ GK +SMG+G+++ S + A+
Sbjct: 8 IFVKNVNFGTTDESLKELFEKKI--GKVVECSISKRLERGKYLSMGYGWVKMASPDLASK 65
Query: 678 VCRDLQGTILDGHALILQLCHAKKDE------QVVKKAEKDKSSTKLLVRNVAFEAQ 728
+ +QG LDGH + L++ +KK+E Q K ++ + S K++VRNV F+ Q
Sbjct: 66 AVKTIQGIELDGHRINLKI--SKKEEEKLNNRQEAKNQDQPEGSCKIMVRNVPFQCQ 120
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 498 LVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-----LALVVFLEPVEAAAAFKGLAY 552
+V+N+P+ EL ++F FG L V +P T A V F +A++AFK L
Sbjct: 111 MVRNVPFQCQVPELEQLFSTFGELKFVRMPKNPTGKHRGFAFVEFKLAADASSAFKALKL 170
Query: 553 KRY-KGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVG 587
+ G L LEWA S+ S S+ K+ A+ G
Sbjct: 171 STHIYGRRLVLEWADSNTESISAIRTKTVKSAAIQG 206
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 175/421 (41%), Gaps = 75/421 (17%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V +L + +E L + FS G VS + + D TK S G AYV + ++A AI
Sbjct: 34 SASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAI 93
Query: 358 EVLDNSIFQGRLLHVM-----PARHKKSSDK---QELH----NSTSQGTKTLKQRREEER 405
E L+ + +G+L +M P+ KK + + LH N T ++ +
Sbjct: 94 EKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSSK 153
Query: 406 KASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAE 464
A++ +G +K + + F ++ E I +G+ LL+ + + ++ E +
Sbjct: 154 VATDETGKSKGFGYVHFEEDESASEAIDALNGM----LLNGQEIYVGPHLSKKERE---- 205
Query: 465 TKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKV 524
S EE A T+ +KN+ ++++ E ++ KFG D V
Sbjct: 206 ------------SKFEEMKANFTN--------VYIKNINTETTDKEFEELVAKFGKTDSV 245
Query: 525 ILPST-----KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGN 579
+L T K V F+ +A + L +KG PLY+ A Q K
Sbjct: 246 VLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQELKK-- 303
Query: 580 QKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEH 639
+++A R + +G+ +LF+KNL+ D+ L + F +
Sbjct: 304 --------QYEATRMEKMAKYQGI-------------NLFIKNLDDSIDDKKLEEEFAPY 342
Query: 640 IKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHA 699
G I S KV +NGK S GFGF+ F + E AT + I+ G L + +
Sbjct: 343 ---GTITSAKVMT-TENGK--SKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQR 396
Query: 700 K 700
K
Sbjct: 397 K 397
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + + +L + F+ G IT AK+M T++GKS+ F F+ F T +EA +AI N
Sbjct: 321 LFIKNLDDSIDDKKLEEEFAPYGTITSAKVMTTENGKSKGFGFVCFSTPEEATKAITEKN 380
Query: 63 KSYLDTCRISCEIARK 78
+ + + IA++
Sbjct: 381 QQIVAGKPLYVAIAQR 396
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
++F+KNL+ ++ L F G ILS KV + GK S GFG++ F+ E+A+
Sbjct: 124 NIFIKNLHPDIDNKALYDTFSVF---GNILSSKVATD-ETGK--SKGFGYVHFEEDESAS 177
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
L G +L+G + + H K E+ K E + T + ++N+
Sbjct: 178 EAIDALNGMLLNGQEIYVG-PHLSKKERESKFEEMKANFTNVYIKNI 223
>gi|302767104|ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
gi|300164963|gb|EFJ31571.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
Length = 654
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 175/407 (42%), Gaps = 54/407 (13%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L T E +L FS+ G V+ V + D T+RS G YV Y+ A RA+E L
Sbjct: 40 LYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAMEAL 99
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ + G+ + +M + S+ K + N K L + S + KA +
Sbjct: 100 NYTPINGKTIRIMWSHRDPSTRKSGVGNIF---IKNLDE-----------SIDNKALHDT 145
Query: 421 FMRPDTVVE-NIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSL 479
F+ ++ IA + G SK D A +A+ + + K + A S
Sbjct: 146 FIAFGPILSCKIAHQDGRSKGYGFVHFETDEAANLAIEKVNGMQLVGKKVFVAKFVKRSD 205
Query: 480 EEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLAL 534
+ G+T + +VF VKNL + +E E+ + F FG + V++ +K
Sbjct: 206 RLAATGET----KFTNVF-VKNLDPEMAEEEIKEHFSTFGVITNVVIMKDENDKSKGFGF 260
Query: 535 VVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRA 594
V F +P A AA + + + +Y+ A Q + E +R
Sbjct: 261 VNFDDPEAARAAVETMNNSQLGSRTIYVGRA------QKKAER----------EQILRRQ 304
Query: 595 LLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL 654
E+++E + + +L+VKNL+ DE L++ F + G I S KV +
Sbjct: 305 FEEKRMEQF-------QKYQGANLYVKNLDDSIDDETLKQEFSRY---GNITSAKV---M 351
Query: 655 KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKK 701
++ K +S GFGF+ F S E A+ + G +++G + + + K+
Sbjct: 352 RDEKGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVAMAQRKE 398
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ L+V+NL + ++ L++ FS++GN++ ++ D + SKG +V + PE ASRA
Sbjct: 317 QGANLYVKNLDDSIDDETLKQEFSRYGNITSAKVMRD-EKGISKGFGFVCFTSPEEASRA 375
Query: 357 IEVLDNSIFQGRLLHVMPARHKK 379
+ + G+ ++V A+ K+
Sbjct: 376 ATETNGLMINGKPIYVAMAQRKE 398
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + ++ L+ FS+ G IT AK+MR + G S+ F F+ F + +EA A
Sbjct: 319 ANLYVKNLDDSIDDETLKQEFSRYGNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATE 378
Query: 61 FNKSYLDTCRISCEIARK 78
N ++ I +A++
Sbjct: 379 TNGLMINGKPIYVAMAQR 396
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + E+ +++ FS G IT+ +M+ ++ KS+ F F+ F + A A++
Sbjct: 216 TNVFVKNLDPEMAEEEIKEHFSTFGVITNVVIMKDENDKSKGFGFVNFDDPEAARAAVET 275
Query: 61 FNKSYLDTCRISCEIARK 78
N S L + I A+K
Sbjct: 276 MNNSQLGSRTIYVGRAQK 293
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
++FVKNL+ + +E +++HF G I +V + +K+ + S GFGF+ FD E A
Sbjct: 217 NVFVKNLDPEMAEEEIKEHFSTF---GVITNVVI---MKDENDKSKGFGFVNFDDPEAAR 270
Query: 677 NVCRDLQGTILDGHALILQLCHAKKD-EQVVKKAEKDK 713
+ + L + + K + EQ++++ ++K
Sbjct: 271 AAVETMNNSQLGSRTIYVGRAQKKAEREQILRRQFEEK 308
>gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]
Length = 651
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 190/433 (43%), Gaps = 87/433 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + + +L + F++ G V V + D +++S G AYV Y P A+RA+E+L
Sbjct: 34 LYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARALEML 93
Query: 361 DNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ + GR + +M P+ K KS D + L+++ L +
Sbjct: 94 NFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILSCK--- 150
Query: 404 ERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI 462
A++ +G +K + + + R + I + +G+ +D ++ +G
Sbjct: 151 --VATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMND----------KKVYVGPF--- 195
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
K+ N+ NV + N+V+ VKNL ++E +L ++FGKFG++
Sbjct: 196 -VRKQERDNSPGNV---------------KFNNVY-VKNLAETTTEDDLKEIFGKFGAIT 238
Query: 523 KVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
V++ +K V F P EAA A + L K++ EW +
Sbjct: 239 SVVVMRDGDGRSKCFGFVNFESPDEAALAVQDLNGKKFSDK----EW---------YVGR 285
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
+K++ + E K E+ L+ D+ ++ +L++KNL+ DE LR+ F
Sbjct: 286 AQKKSEREI-ELKEK---FEKNLQEAA------DKYQNTNLYLKNLDDTVDDEKLRELFA 335
Query: 638 EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
E G I S KV +++ S G GF+ F S + A+ ++ ++ L + L
Sbjct: 336 EF---GTITSCKV---MRDSNGASRGSGFVAFKSADDASRALAEMNNKMVGNKPLYVALA 389
Query: 698 HAKKDEQVVKKAE 710
K+D + +A+
Sbjct: 390 QRKEDRKARLQAQ 402
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + TED L++ F + G IT +MR DG+S+ F F+ F + EA A++ N
Sbjct: 213 VYVKNLAETTTEDDLKEIFGKFGAITSVVVMRDGDGRSKCFGFVNFESPDEAALAVQDLN 272
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KNL V +++LR+ F++ G IT K+MR +G SR F+ F++ +A A+
Sbjct: 314 TNLYLKNLDDTVDDEKLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDASRALAE 373
Query: 61 FNKSYLDTCRISCEIARK 78
N + + +A++
Sbjct: 374 MNNKMVGNKPLYVALAQR 391
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ +F++NL + L + F FGN+ + D SKG +V Y E+A AI
Sbjct: 119 TANIFIKNLDKSIDNKALYDTFCVFGNILSCKVATDP-AGESKGYGFVQYERDEAAHAAI 177
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSD 382
E L+ + + ++V P K+ D
Sbjct: 178 EKLNGMLMNDKKVYVGPFVRKQERD 202
>gi|256075085|ref|XP_002573851.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044948|emb|CCD82496.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 726
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 179/432 (41%), Gaps = 90/432 (20%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L + L+V +L ++ L+ FS+ G V + D T+ S G YV + P+ A +
Sbjct: 10 LMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQ 69
Query: 356 AIEVLDNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLK 398
A+EVL+ GR + +M P+ K KS +++EL+++ S + L
Sbjct: 70 ALEVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGRILS 129
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVR---IA 455
+ + +G +K + + + E K N++ +R +
Sbjct: 130 CK-----IVMDENGQSKGYGFVHFEKEECAERAIEK------------INNMIIRDRVVY 172
Query: 456 LGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMF 515
+G + I +T++ K+ K + +KN P ++ +L +MF
Sbjct: 173 VG--KFIPKTER------------------KSQARKVKFNNLYIKNFPPETDNEKLKEMF 212
Query: 516 GKFGSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
+FG + + +K V FL+P A A K + K +G LY
Sbjct: 213 NEFGEIKSACVMKDSEGKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALY--------- 263
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDE 630
++ +K + ++ L+Q+LE A+ + + +L+VKNL+ D+
Sbjct: 264 ----CARAQRKEE--------RQEELKQRLEK-QRAERQSSYMLNVNLYVKNLDDNIDDK 310
Query: 631 NLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGH 690
L + F H G I S KV +K+ N S GFGF+ F + E A D+ GTI+
Sbjct: 311 RLEEAFSVH---GSITSAKV---MKDANNRSKGFGFVCFANPEQAARAVTDMNGTIIGSK 364
Query: 691 ALILQLCHAKKD 702
L + L K+D
Sbjct: 365 PLYVALAQRKED 376
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KN P ++L++ F++ GEI A +M+ +GKS+ F F+ F AE A+K +
Sbjct: 194 LYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCFLDPDHAENAVKTMH 253
Query: 63 KSYLDTCRISCEIARK 78
++ + C A++
Sbjct: 254 GKEIEGRALYCARAQR 269
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + + RL + FS G IT AK+M+ + +S+ F F+ F ++A A+ N
Sbjct: 298 LYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDMN 357
Query: 63 KSYLDTCRISCEIARK 78
+ + + + +A++
Sbjct: 358 GTIIGSKPLYVALAQR 373
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL K + + L D FS G I K++ ++G+S+ + F+ F E+ AE AI+ N
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKIN 162
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
+V+ +L++KN +T +E L++ F E G I S V +K+ + S GFGF+ F
Sbjct: 188 KVKFNNLYIKNFPPETDNEKLKEMFNEF---GEIKSACV---MKDSEGKSKGFGFVCFLD 241
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAK--KDEQVVKKAEKDKS 714
+ A N + + G ++G AL K + E++ ++ EK ++
Sbjct: 242 PDHAENAVKTMHGKEIEGRALYCARAQRKEERQEELKQRLEKQRA 286
>gi|429859384|gb|ELA34169.1| pre-rRNA processing protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 866
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 35/159 (22%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI V+ LP +T+ R FS G E+TD K++ R+ ++G++T A +A+K
Sbjct: 14 SRIFVRGLPPKITDAEFRKHFSAGGREVTDVKVI-----PQRRIGYVGYKTPDVAAKAVK 68
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKT-I 118
YFNKSY+ RI+ E+AR + DP +L+K + VS P AK + +
Sbjct: 69 YFNKSYVRMSRINVELARPIADP---------ALQKTRGVS----GPSFVAKMSDSAAPL 115
Query: 119 EKVTENDD---------------PQLLEFLQVMQPRVKS 142
E DD P+L E+L V QP KS
Sbjct: 116 PPSAEQDDGSKKKRKREEVDESNPKLREYLSVFQPGKKS 154
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 287 SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGN-VSEVHIVVDKDTKRSKGIAYV 345
+S D LE+ R+FVR LP T+ E R+HFS G V++V ++ + I YV
Sbjct: 2 ASIDAATPALETSRIFVRGLPPKITDAEFRKHFSAGGREVTDVKVIPQRR------IGYV 55
Query: 346 LYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
Y P+ A++A++ + S + ++V AR
Sbjct: 56 GYKTPDVAAKAVKYFNKSYVRMSRINVELAR 86
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I +KNLP T+ +R FS G++ +L + +R FAF F T +EAE A+
Sbjct: 742 TKIVIKNLPFEATKKDIRTLFSTYGQLRAVRLPKKFGNSTRGFAFAEFVTPREAENALNA 801
Query: 61 FNKSYL 66
++L
Sbjct: 802 LRDTHL 807
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++ ++NLP+ AT+ ++R FS +G + V + K ++G A+ + P A A+
Sbjct: 743 KIVIKNLPFEATKKDIRTLFSTYGQLRAVRL-PKKFGNSTRGFAFAEFVTPREAENALNA 801
Query: 360 LDNSIFQGRLL 370
L ++ GR L
Sbjct: 802 LRDTHLLGRKL 812
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLA 551
++KNLP+++++ ++ +F +G L V LP ST+ A F+ P EA A L
Sbjct: 744 IVIKNLPFEATKKDIRTLFSTYGQLRAVRLPKKFGNSTRGFAFAEFVTPREAENALNALR 803
Query: 552 YKRYKGVPLYLEW 564
G L L++
Sbjct: 804 DTHLLGRKLVLDY 816
>gi|256075087|ref|XP_002573852.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044949|emb|CCD82497.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 724
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 180/434 (41%), Gaps = 90/434 (20%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L + L+V +L ++ L+ FS+ G V + D T+ S G YV + P+ A +
Sbjct: 10 LMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQ 69
Query: 356 AIEVLDNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLK 398
A+EVL+ GR + +M P+ K KS +++EL+++ S + L
Sbjct: 70 ALEVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGRILS 129
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVR---IA 455
+ + +G +K + + + E K N++ +R +
Sbjct: 130 CK-----IVMDENGQSKGYGFVHFEKEECAERAIEK------------INNMIIRDRVVY 172
Query: 456 LGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMF 515
+G + I +T++ K+ K + +KN P ++ +L +MF
Sbjct: 173 VG--KFIPKTER------------------KSQARKVKFNNLYIKNFPPETDNEKLKEMF 212
Query: 516 GKFGSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
+FG + + +K V FL+P A A K + K +G LY
Sbjct: 213 NEFGEIKSACVMKDSEGKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALY--------- 263
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDE 630
++ +K + ++ L+Q+LE A+ + + +L+VKNL+ D+
Sbjct: 264 ----CARAQRKEE--------RQEELKQRLEK-QRAERQSSYMLNVNLYVKNLDDNIDDK 310
Query: 631 NLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGH 690
L + F H G I S KV +K+ N S GFGF+ F + E A D+ GTI+
Sbjct: 311 RLEEAFSVH---GSITSAKV---MKDANNRSKGFGFVCFANPEQAARAVTDMNGTIIGSK 364
Query: 691 ALILQLCHAKKDEQ 704
L + L K+D +
Sbjct: 365 PLYVALAQRKEDRR 378
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KN P ++L++ F++ GEI A +M+ +GKS+ F F+ F AE A+K +
Sbjct: 194 LYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCFLDPDHAENAVKTMH 253
Query: 63 KSYLDTCRISCEIARK 78
++ + C A++
Sbjct: 254 GKEIEGRALYCARAQR 269
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + + RL + FS G IT AK+M+ + +S+ F F+ F ++A A+ N
Sbjct: 298 LYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDMN 357
Query: 63 KSYLDTCRISCEIARK 78
+ + + + +A++
Sbjct: 358 GTIIGSKPLYVALAQR 373
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL K + + L D FS G I K++ ++G+S+ + F+ F E+ AE AI+ N
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKIN 162
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
+V+ +L++KN +T +E L++ F E G I S V +K+ + S GFGF+ F
Sbjct: 188 KVKFNNLYIKNFPPETDNEKLKEMFNEF---GEIKSACV---MKDSEGKSKGFGFVCFLD 241
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAK--KDEQVVKKAEKDKS 714
+ A N + + G ++G AL K + E++ ++ EK ++
Sbjct: 242 PDHAENAVKTMHGKEIEGRALYCARAQRKEERQEELKQRLEKQRA 286
>gi|302755232|ref|XP_002961040.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
gi|300171979|gb|EFJ38579.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
Length = 625
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 174/406 (42%), Gaps = 54/406 (13%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L T E +L FS+ G V+ V + D T+RS G YV Y+ A RA+E L
Sbjct: 39 LYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAMEAL 98
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ + G+ + +M + S+ K + N K L + S + KA +
Sbjct: 99 NYTPINGKTIRIMWSHRDPSTRKSGVGNIF---IKNLDE-----------SIDNKALHDT 144
Query: 421 FMRPDTVVE-NIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSL 479
F+ ++ IA + G SK D A +A+ + + K + A S
Sbjct: 145 FIAFGPILSCKIAHQDGRSKGYGFVHFETDEAANLAIEKVNGMQLVGKKVFVAKFVKRSD 204
Query: 480 EEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLAL 534
+ G+T + +VF VKNL + +E E+ + F FG + V++ +K
Sbjct: 205 RLAATGET----KFTNVF-VKNLDPEMAEEEINEHFSTFGVITNVVIMKDENDKSKGFGF 259
Query: 535 VVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRA 594
V F +P A AA + + + +Y+ A Q + E +R
Sbjct: 260 VNFDDPEAARAAVETMNNSQLGSRTIYVGRA------QKKAER----------EQILRRQ 303
Query: 595 LLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL 654
E+++E + + +L+VKNL+ DE L++ F + G I S KV +
Sbjct: 304 FEEKRMEQF-------QKYQGANLYVKNLDDSIDDETLKQEFSRY---GNITSAKV---M 350
Query: 655 KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
++ K +S GFGF+ F S E A+ + G +++G + + + K
Sbjct: 351 RDEKGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVAMAQRK 396
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ L+V+NL + ++ L++ FS++GN++ ++ D + SKG +V + PE ASRA
Sbjct: 316 QGANLYVKNLDDSIDDETLKQEFSRYGNITSAKVMRD-EKGISKGFGFVCFTSPEEASRA 374
Query: 357 IEVLDNSIFQGRLLHVMPARHK 378
+ + G+ ++V A+ K
Sbjct: 375 ATETNGLMINGKPIYVAMAQRK 396
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + ++ L+ FS+ G IT AK+MR + G S+ F F+ F + +EA A
Sbjct: 318 ANLYVKNLDDSIDDETLKQEFSRYGNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATE 377
Query: 61 FNKSYLDTCRISCEIARK 78
N ++ I +A++
Sbjct: 378 TNGLMINGKPIYVAMAQR 395
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + E+ + + FS G IT+ +M+ ++ KS+ F F+ F + A A++
Sbjct: 215 TNVFVKNLDPEMAEEEINEHFSTFGVITNVVIMKDENDKSKGFGFVNFDDPEAARAAVET 274
Query: 61 FNKSYLDTCRISCEIARK 78
N S L + I A+K
Sbjct: 275 MNNSQLGSRTIYVGRAQK 292
>gi|254567738|ref|XP_002490979.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|238030776|emb|CAY68699.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|328352488|emb|CCA38887.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 626
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 176/426 (41%), Gaps = 91/426 (21%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V L T TE +L E FS G+V+ + + D TKRS G YV + + RA+E L
Sbjct: 54 LYVGELDPTVTESDLYEFFSPIGSVNSIRVCRDAVTKRSLGYGYVNFHSQAAGERALEEL 113
Query: 361 DNSIFQGRLLHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQRREE 403
+ + +G +M P+ + S + + LH++ S K L +
Sbjct: 114 NYAEIKGVRCRLMWSQRDPSLRRSGSGNIFIKNLDPAIENKTLHDTFSSFGKVLSCK--- 170
Query: 404 ERKASEASGNTKAWNSLFMRPD----TVVENIARKHGVSKSDLLDREANDLAVRIALGET 459
A++ +GN+K + + D +ENI +G+ LL+ + +A +
Sbjct: 171 --VATDENGNSKGFGFVHYESDEAAQAAIENI---NGM----LLNGREIYVGPHLAKKDR 221
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
+ S +E +K +VF VKN +S+E EL ++F +G
Sbjct: 222 E----------------SRFQEM-------IKNYTNVF-VKNFDTESTEDELRELFESYG 257
Query: 520 SLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
+ + L K V F E +A A + L K YKG PLY+
Sbjct: 258 PITSIHLQVDSEGHNKGFGFVNFAEHDDAVKAVEALNDKEYKGKPLYV------------ 305
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRK 634
+ +KN+ V H+ + +LE + + +S +LF+KNL+ D L +
Sbjct: 306 -GRAQKKNERV---HELTKKYEADRLEKL-------QKYQSVNLFIKNLDESIDDARLEE 354
Query: 635 HFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALIL 694
F G I S KV +NGK S GFGF+ + E AT ++ ++ L +
Sbjct: 355 EFKPF---GTITSAKVMLD-ENGK--SRGFGFVCLSTPEEATKAISEMNQRMVANKPLYV 408
Query: 695 QLCHAK 700
L K
Sbjct: 409 ALAQPK 414
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 135/326 (41%), Gaps = 35/326 (10%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG +F++NL L + FS FG V + D++ SKG +V Y E+A AI
Sbjct: 139 SGNIFIKNLDPAIENKTLHDTFSSFGKVLSCKVATDENGN-SKGFGFVHYESDEAAQAAI 197
Query: 358 EVLDNSIFQGRLLHVMP--ARHKKSSDKQEL-HNSTSQGTKTL--KQRREEERKASEASG 412
E ++ + GR ++V P A+ + S QE+ N T+ K + +E R+ E+ G
Sbjct: 198 ENINGMLLNGREIYVGPHLAKKDRESRFQEMIKNYTNVFVKNFDTESTEDELRELFESYG 257
Query: 413 NTKAWNSLFMRPDT-------VVENIARKHGVSKS--DLLDREANDLAVRIALGETQVIA 463
S+ ++ D+ N A K+ L D+E + + G Q
Sbjct: 258 ---PITSIHLQVDSEGHNKGFGFVNFAEHDDAVKAVEALNDKEYKGKPLYV--GRAQKKN 312
Query: 464 ETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHV-FLVKNLPYDSSEGELAKMFGKFGSLD 522
E LT +++ A + + L++ V +KNL + L + F FG++
Sbjct: 313 ERVHELT---------KKYEADRLEKLQKYQSVNLFIKNLDESIDDARLEEEFKPFGTIT 363
Query: 523 --KVIL---PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
KV+L ++ V P EA A + + PLY+ A + +S ++
Sbjct: 364 SAKVMLDENGKSRGFGFVCLSTPEEATKAISEMNQRMVANKPLYVALAQPKAIRRSQLAQ 423
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGV 603
Q + + + A + Q ++ +
Sbjct: 424 QIQARNQMRMQQQAGPGIPNQFVQPI 449
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+S LF++NL + + L E F FG ++ +++D++ K S+G +V + PE A++A
Sbjct: 334 QSVNLFIKNLDESIDDARLEEEFKPFGTITSAKVMLDENGK-SRGFGFVCLSTPEEATKA 392
Query: 357 IEVLDNSIFQGRLLHVMPARHK 378
I ++ + + L+V A+ K
Sbjct: 393 ISEMNQRMVANKPLYVALAQPK 414
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 609 DPD--RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGF 666
DP R S ++F+KNL+ ++ L F G++LS KV +NG S GFGF
Sbjct: 131 DPSLRRSGSGNIFIKNLDPAIENKTLHDTFSSF---GKVLSCKVATD-ENGN--SKGFGF 184
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRN 722
+ ++S E A ++ G +L+G + + AKKD + + E K+ T + V+N
Sbjct: 185 VHYESDEAAQAAIENINGMLLNGREIYVGPHLAKKDRE-SRFQEMIKNYTNVFVKN 239
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + + + RL + F G IT AK+M ++GKSR F F+ T +EA +AI N
Sbjct: 338 LFIKNLDESIDDARLEEEFKPFGTITSAKVMLDENGKSRGFGFVCLSTPEEATKAISEMN 397
Query: 63 KSYLDTCRISCEIAR 77
+ + + +A+
Sbjct: 398 QRMVANKPLYVALAQ 412
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN TED LR+ F G IT L +G ++ F F+ F +A +A++
Sbjct: 233 TNVFVKNFDTESTEDELRELFESYGPITSIHLQVDSEGHNKGFGFVNFAEHDDAVKAVEA 292
Query: 61 FN 62
N
Sbjct: 293 LN 294
>gi|356552218|ref|XP_003544466.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 652
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 207/484 (42%), Gaps = 100/484 (20%)
Query: 266 HSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNV 325
S V NG P NP+ Q V S L+V +L + +L + F++ V
Sbjct: 9 QSPVSAPPPNGVANAPNNPN-------QFVTTS--LYVGDLEQNVNDAQLYDLFNQVVQV 59
Query: 326 SEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHK-- 378
V + D T+RS G YV ++ P+ A+RA++VL+ + R + +M P+ K
Sbjct: 60 VSVRVCRDLTTRRSLGYGYVNFSNPQDAARALDVLNFTPLNNRPIRIMYSHRDPSLRKSG 119
Query: 379 ----------KSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVV 428
K+ D + LH++ S L + A++ASG +K + + +
Sbjct: 120 TANIFIKNLDKAIDHKALHDTFSSFGLILSCK-----IATDASGLSKGYGFVQFDSEESA 174
Query: 429 EN-IARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKT 487
+N I + +G+ +D ++ +G + + AL+
Sbjct: 175 QNAIDKLNGMLIND----------KQVYVGHFLRKQDRENALSKT--------------- 209
Query: 488 DGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVIL-----PSTKTLALVVFLEPVE 542
+ N+V+ VKNL +++ EL K FG++G++ ++ ++ V F P +
Sbjct: 210 ----KFNNVY-VKNLSESTTDEELMKFFGEYGTITSAVIMRDADGKSRCFGFVNFENPDD 264
Query: 543 AAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEG 602
AA A +GL K+ EW VG+ K++ EQ+L+G
Sbjct: 265 AAKAVEGLNGKKVDDK----EW--------------------YVGKAQ-KKSEREQELKG 299
Query: 603 VTDADI--DPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNV 660
+ I D+ + +L++KNL+ DE L++ F E+ G I S KV +++ +
Sbjct: 300 RFEQSIKESADKYQGVNLYLKNLDDTISDEKLKEMFAEY---GTITSCKV---MRDPTGI 353
Query: 661 SMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLV 720
G GF+ F + E A+ ++ G ++ G L + L K+D + +A+ + +
Sbjct: 354 GRGSGFVAFSTPEEASRALGEMNGKMIAGKPLYVALAQRKEDRRARLQAQFSQMRPVAIT 413
Query: 721 RNVA 724
+VA
Sbjct: 414 PSVA 417
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + T++ L FF + G IT A +MR DGKSR F F+ F +A +A++ N
Sbjct: 214 VYVKNLSESTTDEELMKFFGEYGTITSAVIMRDADGKSRCFGFVNFENPDDAAKAVEGLN 273
Query: 63 KSYLD 67
+D
Sbjct: 274 GKKVD 278
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL +++++L++ F++ G IT K+MR G R F+ F T +EA A+ N
Sbjct: 317 LYLKNLDDTISDEKLKEMFAEYGTITSCKVMRDPTGIGRGSGFVAFSTPEEASRALGEMN 376
Query: 63 KSYLDTCRISCEIARK 78
+ + +A++
Sbjct: 377 GKMIAGKPLYVALAQR 392
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 185/432 (42%), Gaps = 85/432 (19%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + T+ +L + F++ G V V + D T RS G YV Y+ + A+RAI+VL
Sbjct: 42 LYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAIDVL 101
Query: 361 DNSIFQGRLLHVMPARHK-----------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ + + + V +R KS D + LH + S + +
Sbjct: 102 NFTPLNNKTIRVSVSRRDPTDRKSGAGNIFIKNLDKSIDIKALHETFSSFGTIISCK--- 158
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIA 463
A++ASG +K + F++ D+ A + + K + + + V + L + +
Sbjct: 159 --IATDASGQSKGYG--FVQYDS---EEAAQTAIDKLNGMLMNDKQVYVGVFLRKQDRDS 211
Query: 464 ETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDK 523
E K + N+++ VKNL +SE +L K FG++G++
Sbjct: 212 EMSKT-----------------------KFNNIY-VKNLSDSTSEDDLRKTFGEYGTITS 247
Query: 524 VIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKG 578
V++ +K V F P +AA A L K++ EW K
Sbjct: 248 VVVMRDADGKSKCFGFVNFENPEDAAKAVDALNGKKFDDK----EW---------YVGKA 294
Query: 579 NQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE 638
+K++ + L+ + E + D+ + +L+VKNL+ DE L++ F E
Sbjct: 295 QKKSE--------REVELKSRFEQTVKEQV--DKYQGVNLYVKNLDDTIDDEKLKELFSE 344
Query: 639 HIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
+ G I S KV +++ +S G GF+ F + E A+ ++ G ++ L + L
Sbjct: 345 Y---GTITSCKV---MRDPSGISRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVALAQ 398
Query: 699 AKKDEQVVKKAE 710
K++ + +A+
Sbjct: 399 RKEERRARLQAQ 410
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I VKNL +ED LR F + G IT +MR DGKS+ F F+ F ++A +A+ N
Sbjct: 221 IYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGKSKCFGFVNFENPEDAAKAVDALN 280
Query: 63 KSYLD 67
D
Sbjct: 281 GKKFD 285
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + +++L++ FS+ G IT K+MR G SR F+ F T +EA A+ N
Sbjct: 324 LYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGISRGSGFVAFSTPEEASRALGEMN 383
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 384 GKMIVSKPLYVALAQR 399
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR-TKDGKSRQFAFIGFRTEQEAEEAIK 59
+ + V +L + VT+ +L D F+Q G++ ++ R G+S + ++ + +Q+A AI
Sbjct: 40 TSLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAID 99
Query: 60 YFNKSYLDTCRISCEIARKVGDP 82
N + L+ I ++R+ DP
Sbjct: 100 VLNFTPLNNKTIRVSVSRR--DP 120
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+G +F++NL + L E FS FG + I D + +SKG +V Y E+A AI
Sbjct: 127 AGNIFIKNLDKSIDIKALHETFSSFGTIISCKIATDA-SGQSKGYGFVQYDSEEAAQTAI 185
Query: 358 EVLDNSIFQGRLLHV 372
+ L+ + + ++V
Sbjct: 186 DKLNGMLMNDKQVYV 200
>gi|256075089|ref|XP_002573853.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044950|emb|CCD82498.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 688
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 180/434 (41%), Gaps = 90/434 (20%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L + L+V +L ++ L+ FS+ G V + D T+ S G YV + P+ A +
Sbjct: 10 LMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQ 69
Query: 356 AIEVLDNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLK 398
A+EVL+ GR + +M P+ K KS +++EL+++ S + L
Sbjct: 70 ALEVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGRILS 129
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVR---IA 455
+ + +G +K + + + E K N++ +R +
Sbjct: 130 CK-----IVMDENGQSKGYGFVHFEKEECAERAIEK------------INNMIIRDRVVY 172
Query: 456 LGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMF 515
+G + I +T++ K+ K + +KN P ++ +L +MF
Sbjct: 173 VG--KFIPKTER------------------KSQARKVKFNNLYIKNFPPETDNEKLKEMF 212
Query: 516 GKFGSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVL 570
+FG + + +K V FL+P A A K + K +G LY
Sbjct: 213 NEFGEIKSACVMKDSEGKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALY--------- 263
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDE 630
++ +K + ++ L+Q+LE A+ + + +L+VKNL+ D+
Sbjct: 264 ----CARAQRKEE--------RQEELKQRLEK-QRAERQSSYMLNVNLYVKNLDDNIDDK 310
Query: 631 NLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGH 690
L + F H G I S KV +K+ N S GFGF+ F + E A D+ GTI+
Sbjct: 311 RLEEAFSVH---GSITSAKV---MKDANNRSKGFGFVCFANPEQAARAVTDMNGTIIGSK 364
Query: 691 ALILQLCHAKKDEQ 704
L + L K+D +
Sbjct: 365 PLYVALAQRKEDRR 378
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KN P ++L++ F++ GEI A +M+ +GKS+ F F+ F AE A+K +
Sbjct: 194 LYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCFLDPDHAENAVKTMH 253
Query: 63 KSYLDTCRISCEIARK 78
++ + C A++
Sbjct: 254 GKEIEGRALYCARAQR 269
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + + RL + FS G IT AK+M+ + +S+ F F+ F ++A A+ N
Sbjct: 298 LYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDMN 357
Query: 63 KSYLDTCRISCEIARK 78
+ + + + +A++
Sbjct: 358 GTIIGSKPLYVALAQR 373
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL K + + L D FS G I K++ ++G+S+ + F+ F E+ AE AI+ N
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKIN 162
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
+V+ +L++KN +T +E L++ F E G I S V +K+ + S GFGF+ F
Sbjct: 188 KVKFNNLYIKNFPPETDNEKLKEMFNEF---GEIKSACV---MKDSEGKSKGFGFVCFLD 241
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAK--KDEQVVKKAEKDKS 714
+ A N + + G ++G AL K + E++ ++ EK ++
Sbjct: 242 PDHAENAVKTMHGKEIEGRALYCARAQRKEERQEELKQRLEKQRA 286
>gi|147769692|emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]
Length = 555
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 181/428 (42%), Gaps = 57/428 (13%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L L+V +L +E EL + FS G + V + D + +S AYV + P AS+
Sbjct: 26 LHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFYPSDASK 85
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
A+ L+++ G+ + +M + K L N K L + S N+
Sbjct: 86 ALACLNHTKLMGKPMRIMWSHRDPLPRKTGLANLF---VKNL-----------DPSINSA 131
Query: 416 AWNSLFMRPDTVVE-NIARKHGVSKS-DLLDREANDLAVRIALGETQVIAETKKALTNAG 473
+ +F + ++ +A ++G SK + +++D A + + KK +
Sbjct: 132 SLQDIFCKFGNILSCKVAEENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKF 191
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVIL-----PS 528
V +E S + K +N VKNL D +E + F +FG + V++
Sbjct: 192 VKKCERKEAS----EETKFTN--VYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGK 245
Query: 529 TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGE 588
++ V F P EA A + L G L G++K +
Sbjct: 246 SRGFGFVNFESPDEAKKAVEAL-----NGAML-----------------GSKKLFVGRAQ 283
Query: 589 HDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSV 648
A+R L + + + + +I ++ + +L+VKNL+ D+ L++HF G+I S
Sbjct: 284 KKAERQELLKHEKEMVNCNIGKEK--ASNLYVKNLDASVDDDKLQEHFSSC---GQITSA 338
Query: 649 KVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKK 708
KV +H +S GFGF+ F + E A L GT+L G +L + + K+D Q +
Sbjct: 339 KVMRH---DSGLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQRKEDRQRIPM 395
Query: 709 AEKDKSST 716
+ + +T
Sbjct: 396 KQAQQGNT 403
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S + VKNL V +D+L++ FS G+IT AK+MR G S+ F F+ F T +EA++A+
Sbjct: 309 SNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTT 368
Query: 61 FNKSYL 66
N + L
Sbjct: 369 LNGTLL 374
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 49/78 (62%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + +TED +RD FS+ G++ +M+ +GKSR F F+ F + EA++A++
Sbjct: 207 TNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEA 266
Query: 61 FNKSYLDTCRISCEIARK 78
N + L + ++ A+K
Sbjct: 267 LNGAMLGSKKLFVGRAQK 284
>gi|356510461|ref|XP_003523956.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
gi|83853808|gb|ABC47841.1| poly(A)-binding protein [Glycine max]
Length = 630
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 194/452 (42%), Gaps = 87/452 (19%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L + L+V +L + + +L + F++ V V I D T++S G YV ++ A++
Sbjct: 21 LTTISLYVGDLHHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGYVNFSNAHDAAK 80
Query: 356 AIEVLDNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLK 398
AI+VL+ + G+++ +M P+ K K+ D + L+++ S L
Sbjct: 81 AIDVLNFTPLNGKIIRIMYSIRDPSARKSGAANVFIKNLDKAIDHKALYDTFSAFGNILS 140
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVEN-IARKHGVSKSDLLDREANDLAVRIALG 457
+ A++ASG +K + + +N I + +G+ +D ++ +G
Sbjct: 141 CK-----VATDASGQSKGHGFVQFESEESAQNAIDKLNGMLIND----------KQVFVG 185
Query: 458 ETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGK 517
+ + AL+ + N+VF VKNL +E +L ++FG+
Sbjct: 186 PFLRKQDRESALSGT-------------------KFNNVF-VKNLLDSMTEADLERIFGE 225
Query: 518 FGSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ 572
+G++ ++ +K V F +AA A + L K + G EW
Sbjct: 226 YGAITSAVVMRDVDGKSKGFGFVNFANVDDAAKAVEALNGKNFDGK----EW-------- 273
Query: 573 SSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENL 632
K +K++ + L+ Q E +T +D + +L++KNL+ DE L
Sbjct: 274 -YVGKAQKKSE--------RELELKGQHEQITKETVD--KYHGTNLYIKNLDDSVGDEEL 322
Query: 633 RKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHAL 692
+ F E G I S KV +++ +S G GF+ F E AT ++ G ++ G L
Sbjct: 323 MELFSEF---GTITSCKV---MRDPNGISRGSGFVSFSIAEGATRALGEMNGKMVAGKPL 376
Query: 693 ILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVA 724
+ L K+D + +A+ +S + NV+
Sbjct: 377 YVALAQRKEDRRARLQAQFSQSRPAAITPNVS 408
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL +TE L F + G IT A +MR DGKS+ F F+ F +A +A++ N
Sbjct: 205 VFVKNLLDSMTEADLERIFGEYGAITSAVVMRDVDGKSKGFGFVNFANVDDAAKAVEALN 264
Query: 63 KSYLD 67
D
Sbjct: 265 GKNFD 269
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KNL V ++ L + FS+ G IT K+MR +G SR F+ F + A A+
Sbjct: 306 TNLYIKNLDDSVGDEELMELFSEFGTITSCKVMRDPNGISRGSGFVSFSIAEGATRALGE 365
Query: 61 FNKSYLDTCRISCEIARK 78
N + + +A++
Sbjct: 366 MNGKMVAGKPLYVALAQR 383
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KNL K + L D FS G I K+ G+S+ F+ F +E+ A+ AI
Sbjct: 112 ANVFIKNLDKAIDHKALYDTFSAFGNILSCKVATDASGQSKGHGFVQFESEESAQNAIDK 171
Query: 61 FN 62
N
Sbjct: 172 LN 173
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 199/454 (43%), Gaps = 90/454 (19%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
++ L+V +L + + +L + FS+ G+V V + D +T+ S G AYV ++ P A+R
Sbjct: 36 FQATSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAAR 95
Query: 356 AIEVLDNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLK 398
A+E+L+ + G+ + +M P+ K KS D + L+++ S L
Sbjct: 96 ALEMLNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILS 155
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVEN-IARKHGVSKSDLLDREANDLAVRIALG 457
+ A+E SG +K + + + +N I++ +G+ +D
Sbjct: 156 C-----KVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLND---------------- 194
Query: 458 ETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGK 517
KK V E S G + N+V+ VKNL ++E L ++FGK
Sbjct: 195 --------KKVYVGPFVRKQERENVS-----GNPKFNNVY-VKNLSESTTEDNLKEIFGK 240
Query: 518 FGSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQ 572
FG + V++ ++ V F P +AA A + L K++ EW
Sbjct: 241 FGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDK----EW-------- 288
Query: 573 SSTSKGNQKNDAVVGEHDAKRALLEQQLE-GVTDADIDPDRVESRSLFVKNLNFKT-CDE 630
+ +K++ + L+++ E + +A D+ + +L++KNL+ DE
Sbjct: 289 -YVCRAQKKSE--------REMELKEKFEKNIKEAA---DKNQGTNLYLKNLDDSIDDDE 336
Query: 631 NLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGH 690
L++ F + G I S KV + L NG VS G GF+ F S E A+ + G ++
Sbjct: 337 KLKEIFADF---GTITSCKVMRDL-NG--VSKGSGFVAFKSAEDASRALVAMNGKMIGSK 390
Query: 691 ALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVA 724
L + L K++ + +A+ + ++ +VA
Sbjct: 391 PLYVALAQRKEERRARLQAQFSQMRPMVMPPSVA 424
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + TED L++ F + G IT +MR DGKSR F F+ F +A A++ N
Sbjct: 220 VYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLN 279
Query: 63 KSYLD-----TCR 70
D CR
Sbjct: 280 GKKFDDKEWYVCR 292
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I +KNL K + L D FS G I K+ G+S+ + F+ F E+ A+ AI
Sbjct: 127 ANIFIKNLDKSIDNKALYDTFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISK 186
Query: 61 FNKSYLD 67
N L+
Sbjct: 187 LNGMLLN 193
>gi|313229163|emb|CBY23748.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 171/411 (41%), Gaps = 57/411 (13%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L TE L + F G V + + D T+RS G AYV + P A RA++ +
Sbjct: 4 LYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALDTM 63
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ + +G+ + +M ++ S + + QG +K + S + KA
Sbjct: 64 NFDVIKGKPIRIMWSQRDPSLRR------SGQGNVFIKN--------LDRSIDNKALYDT 109
Query: 421 FMRPDTVVEN--IARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVS- 477
F ++ + +G + E+++ A R ++ E KK + +
Sbjct: 110 FSSFGNILSCKVVCDINGSKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRND 169
Query: 478 SLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSL--DKVILPSTKTLA-- 533
+ EF D K ++F VKNLP L K F +FG + KVI T L+
Sbjct: 170 RMREFG----DAAKHFTNLF-VKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKC 224
Query: 534 --LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDA 591
+ F E +A AA + + K +G LY A QK E A
Sbjct: 225 HGFISFKEHDQAEAAVEIMHEKEIEGKKLYCGRA--------------QKKAERSSELKA 270
Query: 592 KRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVK 651
K ++Q+ R + +L+VKNL+ DE LR+ F + G I S KV
Sbjct: 271 KYEKIKQE---------RIQRYQGVNLYVKNLDDSIDDEGLREAFKQF---GNITSAKVI 318
Query: 652 KHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD 702
L NG+ S GFGF+ F S E AT ++ G I G L + L K+D
Sbjct: 319 TDL-NGR--SKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLAQRKED 366
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G +F++NL + L + FS FGN+ +V D + SKG +V Y ESA RAIE
Sbjct: 90 GNVFIKNLDRSIDNKALYDTFSSFGNILSCKVVCDING--SKGFGFVHYESDESAQRAIE 147
Query: 359 VLDNSIFQGRLLHVMPARHKKSSDK 383
++ + + + + V AR K +D+
Sbjct: 148 KVNGMLMEDKKVFV--ARFKSRNDR 170
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ++ LR+ F Q G IT AK++ +G+S+ F F+ F + +EA +A+ N
Sbjct: 288 LYVKNLDDSIDDEGLREAFKQFGNITSAKVITDLNGRSKGFGFVCFSSPEEATKAVTEMN 347
>gi|449433509|ref|XP_004134540.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 1 [Cucumis sativus]
gi|449490646|ref|XP_004158665.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 1 [Cucumis sativus]
Length = 158
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 49/75 (65%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ RL VRNLPY+ E L+E FS FG ++EV + D+ TKR KG A++ Y + A A+
Sbjct: 44 ASRLMVRNLPYSTNESRLQEEFSNFGEIAEVLLAKDRSTKRPKGYAFIQYTCQDDAMLAL 103
Query: 358 EVLDNSIFQGRLLHV 372
E +D IF GR+++V
Sbjct: 104 ETMDCKIFDGRMIYV 118
Score = 43.5 bits (101), Expect = 0.36, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKS-RQFAFIGFRTEQEAEEAIK 59
SR+ V+NLP E RL++ FS GEI + L + + K + +AFI + + +A A++
Sbjct: 45 SRLMVRNLPYSTNESRLQEEFSNFGEIAEVLLAKDRSTKRPKGYAFIQYTCQDDAMLALE 104
Query: 60 YFNKSYLDTCRISCEIAR----------KVGDPNMPRPWSRYSLKKE 96
+ D I EIA + P RP R ++ +E
Sbjct: 105 TMDCKIFDGRMIYVEIATPGSGSFGGYPRASGPPKERPNERANVDQE 151
>gi|313219101|emb|CBY43303.1| unnamed protein product [Oikopleura dioica]
Length = 512
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 171/411 (41%), Gaps = 57/411 (13%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L TE L + F G V + + D T+RS G AYV + P A RA++ +
Sbjct: 4 LYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALDTM 63
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ + +G+ + +M ++ S + + QG +K + S + KA
Sbjct: 64 NFDVIKGKPIRIMWSQRDPSLRR------SGQGNVFIKN--------LDRSIDNKALYDT 109
Query: 421 FMRPDTVVEN--IARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVS- 477
F ++ + +G + E+++ A R ++ E KK + +
Sbjct: 110 FSSFGNILSCKVVCDINGSKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRND 169
Query: 478 SLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSL--DKVILPSTKTLA-- 533
+ EF D K ++F VKNLP L + F +FG + KVI T L+
Sbjct: 170 RMREFG----DAAKHFTNLF-VKNLPDSWDTDALLENFEQFGEVVSHKVICDETTGLSKC 224
Query: 534 --LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDA 591
+ F E +A AA + + K +G LY A QK E A
Sbjct: 225 HGFISFKEHDQAEAAVEIMHEKEIEGKKLYCGRA--------------QKKAERSSELKA 270
Query: 592 KRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVK 651
K ++Q+ R + +L+VKNL+ DE LR+ F + G I S KV
Sbjct: 271 KYEKIKQE---------RIQRYQGVNLYVKNLDDSIDDEGLREAFKQF---GNITSAKVI 318
Query: 652 KHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD 702
L NG+ S GFGF+ F S E AT ++ G I G L + L K+D
Sbjct: 319 TDL-NGR--SKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLAQRKED 366
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G +F++NL + L + FS FGN+ +V D + SKG +V Y ESA RAIE
Sbjct: 90 GNVFIKNLDRSIDNKALYDTFSSFGNILSCKVVCDING--SKGFGFVHYESDESAQRAIE 147
Query: 359 VLDNSIFQGRLLHVMPARHKKSSDK 383
++ + + + + V AR K +D+
Sbjct: 148 KVNGMLMEDKKVFV--ARFKSRNDR 170
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ++ LR+ F Q G IT AK++ +G+S+ F F+ F + +EA +A+ N
Sbjct: 288 LYVKNLDDSIDDEGLREAFKQFGNITSAKVITDLNGRSKGFGFVCFSSPEEATKAVTEMN 347
>gi|56758360|gb|AAW27320.1| SJCHGC06322 protein [Schistosoma japonicum]
Length = 721
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 184/439 (41%), Gaps = 90/439 (20%)
Query: 291 VQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIP 350
V + L + L+V +L ++ L+ FS+ G V + D T++S G YV + P
Sbjct: 5 VASQGLMNSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVNFEDP 64
Query: 351 ESASRAIEVLDNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQG 393
+ A +A+EVL+ GR + +M P+ K KS +++EL+++ S
Sbjct: 65 KHAEQALEVLNYEPLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFF 124
Query: 394 TKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVR 453
+ L + + +G +K + + + E K N++ +R
Sbjct: 125 GRILSCK-----IVMDENGQSKGYGFVHFEKEECAERAIEK------------INNMIIR 167
Query: 454 ---IALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
+ +G + I +T++ K+ K + VKN P ++ +
Sbjct: 168 DRVVYVG--KFIPKTER------------------KSQARKVKFNNLYVKNFPPETDNEK 207
Query: 511 LAKMFGKFGSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
L +MF +FG + + +K V +L+P A A + + K +G LY
Sbjct: 208 LKEMFSEFGEIKSACVMKDNEGKSKGFGFVCYLDPDHAENAVRTMHGKEIEGRVLY---- 263
Query: 566 PSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNF 625
++ +K + ++ L+Q++E A+ + + + +L+VKNL+
Sbjct: 264 ---------CARAQRKEE--------RQEELKQKIEK-QRAERQSNYMLNVNLYVKNLDD 305
Query: 626 KTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGT 685
D+ L + F H G I S KV +K+ N S GFGF+ F + E A D+ GT
Sbjct: 306 NIDDKRLEEAFSVH---GSITSAKV---MKDANNRSKGFGFVCFANPEQAARAVTDMNGT 359
Query: 686 ILDGHALILQLCHAKKDEQ 704
I+ L + L K+D +
Sbjct: 360 IIGSKPLYVALAQRKEDRR 378
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKN P ++L++ FS+ GEI A +M+ +GKS+ F F+ + AE A++ +
Sbjct: 194 LYVKNFPPETDNEKLKEMFSEFGEIKSACVMKDNEGKSKGFGFVCYLDPDHAENAVRTMH 253
Query: 63 KSYLDTCRISCEIARK 78
++ + C A++
Sbjct: 254 GKEIEGRVLYCARAQR 269
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + + RL + FS G IT AK+M+ + +S+ F F+ F ++A A+ N
Sbjct: 298 LYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDMN 357
Query: 63 KSYLDTCRISCEIARK 78
+ + + + +A++
Sbjct: 358 GTIIGSKPLYVALAQR 373
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL K + + L D FS G I K++ ++G+S+ + F+ F E+ AE AI+ N
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKIN 162
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
+V+ +L+VKN +T +E L++ F E G I S V +K+ + S GFGF+ +
Sbjct: 188 KVKFNNLYVKNFPPETDNEKLKEMFSEF---GEIKSACV---MKDNEGKSKGFGFVCYLD 241
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAK--KDEQVVKKAEKDKS 714
+ A N R + G ++G L K + E++ +K EK ++
Sbjct: 242 PDHAENAVRTMHGKEIEGRVLYCARAQRKEERQEELKQKIEKQRA 286
>gi|443916594|gb|ELU37606.1| ribosomal processing [Rhizoctonia solani AG-1 IA]
Length = 931
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 116/253 (45%), Gaps = 43/253 (16%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+FV NLPYTAT +++ FS V +V+DK+TK SKG+AYV +AI E AS A+E
Sbjct: 13 IFVSNLPYTATSTDVQTLFSDVAPVRSAFVVLDKETKASKGVAYVSFAIKEDASLALESE 72
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
GR+L + A K + + HN+ K K +RE + K + +A +L
Sbjct: 73 KPFELDGRILRLQWADKKNA--QGVAHNTDKDSPK--KPKREPQPKGPI---DPEAIRTL 125
Query: 421 FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIA------ETKKALTNAGV 474
+V N+ + S +L ++A + G TQV+ E L +A V
Sbjct: 126 ------IVTNLPPG---TNSKVLWKKARKIP-----GATQVVYPVPDHDEHTGRLASAAV 171
Query: 475 -----NVSSLEEFSA-----------GKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKF 518
+V SA G+ G + +++NLP+ +E +L +F F
Sbjct: 172 AKLHNHVFKGSRLSATIKKRADKLVTGRKSGAPSRSSRLIIRNLPWHVTESDLHALFAPF 231
Query: 519 GSLDKVILPSTKT 531
G + + LP+ ++
Sbjct: 232 GPIFSITLPAAQS 244
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
LFVRN+P+ ATED+LR F FG + I +D +T RS+G +V +
Sbjct: 420 LFVRNVPFEATEDDLRALFRAFGPLRYARITMDHETGRSRGTGFVCF 466
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLM-------RTKDGKSRQFAFIGFRTEQE 53
SR+ ++NLP +VTE L F+ G I L +K G+ R FAFI + +
Sbjct: 208 SRLIIRNLPWHVTESDLHALFAPFGPIFSITLPAAQSEGSESKPGRHRGFAFIWMLSRAD 267
Query: 54 AEEAIKYFN 62
AE A+ N
Sbjct: 268 AERALNSVN 276
>gi|429961636|gb|ELA41181.1| hypothetical protein VICG_01780 [Vittaforma corneae ATCC 50505]
Length = 263
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 123/256 (48%), Gaps = 39/256 (15%)
Query: 417 WNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNV 476
+NSLF +TVV+ + ++DLL+ + +L RIAL ET ++A+TKK L N G+ +
Sbjct: 17 YNSLFFSFETVVKRTCESEKIDRNDLLNLQDKELGSRIALLETNLVAQTKKFLENNGIFL 76
Query: 477 SSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVV 536
+ +GK S +V +++N G L + G+F KV + +K LAL+
Sbjct: 77 DKI----SGK------SENVLVLRN---SDLMGALDLVKGEF----KVNIAPSKCLALLT 119
Query: 537 FLEPVEAAAAFKGLAYKRYKGVPLYLEWAP-SDVLSQSSTSKGNQKNDAVVGEHDAKRAL 595
F + +A+ ++ L +R+K +Y E+AP S +L +++S ++ ++ ++ +
Sbjct: 120 FKDLSDASRCYRDLNMRRFKNEVIYCEFAPTSSLLLPNNSSLIDKTGQPILNNCESPKPT 179
Query: 596 LEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLK 655
E+Q + + VKN+ F+ + L+ F +L V++ K
Sbjct: 180 NEKQ---------------TNKIIVKNVPFQATQDELKSIFSSF---THVLDVRLP---K 218
Query: 656 NGKNVSMGFGFIEFDS 671
GF FI DS
Sbjct: 219 KSDGTHRGFAFIVLDS 234
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++I VKN+P T+D L+ FS + D +L + DG R FAFI + + ++AI+Y
Sbjct: 185 NKIIVKNVPFQATQDELKSIFSSFTHVLDVRLPKKSDGTHRGFAFIVLDSPRHVDDAIEY 244
Query: 61 FNKS 64
F+ S
Sbjct: 245 FSSS 248
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
++ ++ V+N+P+ AT+DEL+ FS F +V +V + D +G A+++ P A
Sbjct: 183 QTNKIIVKNVPFQATQDELKSIFSSFTHVLDVRLPKKSDGTH-RGFAFIVLDSPRHVDDA 241
Query: 357 IEVLDNSI-FQGRLL 370
IE +S GR L
Sbjct: 242 IEYFSSSTHLYGRRL 256
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 171/410 (41%), Gaps = 45/410 (10%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
++ S L+V L T TE L E F+ G V+ + + D T+RS G AYV Y
Sbjct: 39 QITPSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADG 98
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGN 413
RA+E L+ S+ +GR +M S + T QG +K +E+ ++A +
Sbjct: 99 ERALEQLNYSLIKGRACRIM------WSQRDPALRKTGQGNIFIKNL--DEQIDNKALHD 150
Query: 414 TKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAG 473
T A + + R G EA + A++ G ++ KK
Sbjct: 151 TFAAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAVNG---MLLNDKKVYVGHH 207
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS----- 528
++ + K + +K VKNL + ++ + K+F +FG++ ++ +
Sbjct: 208 ISRKASSRERQSKLEEMKAQFTNIYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTDEQGQ 267
Query: 529 TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGE 588
++ V F EA A + L Y G L++ S+ +K + E
Sbjct: 268 SRGFGFVNFETHEEAQKAVETLHDSEYHGRKLFV-------------SRAQKKAER---E 311
Query: 589 HDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSV 648
+ +++ + ++E ++ + + +L++KNL DE LR+ F G I S
Sbjct: 312 EELRKSYEQAKVEKMS-------KYQGVNLYIKNLEDDIDDERLRQEFEPF---GSITSA 361
Query: 649 KVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
KV +++ K S GFGF+ F S + AT ++ ++ L + L
Sbjct: 362 KV---MRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLAQ 408
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I VKNL VT+D F Q G +T A + + G+SR F F+ F T +EA++A++
Sbjct: 229 TNIYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTDEQGQSRGFGFVNFETHEEAQKAVET 288
Query: 61 FNKS 64
+ S
Sbjct: 289 LHDS 292
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + ++RLR F G IT AK+MR + G S+ F F+ F + EA +A+ N
Sbjct: 334 LYIKNLEDDIDDERLRQEFEPFGSITSAKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMN 393
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 394 NKMIGSKPLYVSLAQR 409
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + + L D F+ G + K+ + G+S+ + F+ + T + AE AIK N
Sbjct: 134 IFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAVN 193
Query: 63 KSYLDTCRISC--EIARKV 79
L+ ++ I+RK
Sbjct: 194 GMLLNDKKVYVGHHISRKA 212
>gi|366987097|ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
gi|342299178|emb|CCC66926.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
Length = 575
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 188/437 (43%), Gaps = 78/437 (17%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V L T +E L + FS G+VS + + D TK S G AYV + E+ +AIE L
Sbjct: 37 LYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVTKTSLGYAYVNFNDHEAGKKAIEQL 96
Query: 361 DNSIFQGRLLHVM-----PARHKKSSDK---QELH----NSTSQGTKTLKQRREEERKAS 408
+ + +GRL +M PA KK S + LH N T ++ + A+
Sbjct: 97 NYTPIKGRLCRIMWSQRDPALRKKGSGNIFIKNLHPDIDNKALFETFSVFGNILSSKIAT 156
Query: 409 EASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGET-QVIAETK 466
+ +G +K + + F + E I +G+ LL+ + +A + E + ETK
Sbjct: 157 DETGKSKGFGFVHFEHESSAKEAIDALNGM----LLNGQEIYVAPHLTRKERDSQLEETK 212
Query: 467 KALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG-----SL 521
TN VKN+ ++++ E ++F K+G SL
Sbjct: 213 AHFTNV-------------------------YVKNINLETTDEEFNELFAKYGNVLSSSL 247
Query: 522 DKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQK 581
+K K V F + +AA A + L +K L++ S K ++
Sbjct: 248 EKTEDGKLKGFGFVDFEKHEDAAKAVEELNGTEFKDQTLFV----------SRAQKKYER 297
Query: 582 NDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIK 641
+ +++A R + +GV +LFVKNL+ DE L++ F +
Sbjct: 298 MQELKKQYEASRLEKMAKYQGV-------------NLFVKNLDDSIDDEKLKEEFAPY-- 342
Query: 642 EGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKK 701
G I SV+V + NGK S GFGF+ F + E AT + I+ G L + + +K
Sbjct: 343 -GTITSVRVMR-TDNGK--SKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ-RK 397
Query: 702 DEQVVKKAEKDKSSTKL 718
D + + A++ ++ T++
Sbjct: 398 DVRRSQLAQQIQARTQM 414
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 128/322 (39%), Gaps = 46/322 (14%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
SG +F++NL L E FS FGN+ I D +T +SKG +V + SA AI
Sbjct: 122 SGNIFIKNLHPDIDNKALFETFSVFGNILSSKIATD-ETGKSKGFGFVHFEHESSAKEAI 180
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
+ L+ + G+ ++V P +K D Q L + + T + E E +
Sbjct: 181 DALNGMLLNGQEIYVAPHLTRKERDSQ-LEETKAHFTNVYVKNINLETTDEE-------F 232
Query: 418 NSLFMRPDTVVENIARKHGVSK---SDLLDREANDLAVRIA--LGETQVIAETKKALTNA 472
N LF + V+ + K K +D E ++ A + L T+ +T ++ A
Sbjct: 233 NELFAKYGNVLSSSLEKTEDGKLKGFGFVDFEKHEDAAKAVEELNGTEFKDQT-LFVSRA 291
Query: 473 GVNVSSLEE----FSAGKTDGLKRSNHV-FLVKNLPYDSSEGELAKMFGKFGSLDKVILP 527
++E + A + + + + V VKNL + +L + F +G++ V +
Sbjct: 292 QKKYERMQELKKQYEASRLEKMAKYQGVNLFVKNLDDSIDDEKLKEEFAPYGTITSVRVM 351
Query: 528 ST-----KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKN 582
T K V F P EA A + G PLY+
Sbjct: 352 RTDNGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYV-------------------- 391
Query: 583 DAVVGEHDAKRALLEQQLEGVT 604
A+ D +R+ L QQ++ T
Sbjct: 392 -AIAQRKDVRRSQLAQQIQART 412
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + +++L++ F+ G IT ++MRT +GKS+ F F+ F T +EA +AI N
Sbjct: 321 LFVKNLDDSIDDEKLKEEFAPYGTITSVRVMRTDNGKSKGFGFVCFSTPEEATKAITEKN 380
Query: 63 KSYLDTCRISCEIARK 78
+ + + IA++
Sbjct: 381 QQIVAGKPLYVAIAQR 396
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 36/62 (58%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN+ T++ + F++ G + + L +T+DGK + F F+ F ++A +A++
Sbjct: 216 TNVYVKNINLETTDEEFNELFAKYGNVLSSSLEKTEDGKLKGFGFVDFEKHEDAAKAVEE 275
Query: 61 FN 62
N
Sbjct: 276 LN 277
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 13/131 (9%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ GRLFV NLPYT T +EL + FS+ G V + I+ DK T RS+G A+V A E A++A
Sbjct: 110 DPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKA 169
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA 416
I++ D ++ GR V + E+ + T T+ RR ++ +GN
Sbjct: 170 IQMFDGALLGGRTARV---------NYPEVPRGGERRTVTMSGRRRDDGTYKIYAGNL-G 219
Query: 417 WNSLFMRPDTV 427
W +R DT+
Sbjct: 220 WG---VRADTL 227
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKY 60
R+ V NLP T + L FS+ G + DA+++ K +SR FAF+ T +EA +AI+
Sbjct: 113 RLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQM 172
Query: 61 FNKSYLD--TCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRG 113
F+ + L T R++ P +PR R ++ +D + A G
Sbjct: 173 FDGALLGGRTARVNY--------PEVPRGGERRTVTMSGRRRDDGTYKIYAGNLG 219
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 9/120 (7%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+++ NL + D LR F + + ++ +++T RS+G +V ++ E A A+E
Sbjct: 212 KIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALES 271
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNS 419
LD +GR L + A E + T + ++EE + A T+A +S
Sbjct: 272 LDGVELEGRPLRLSLA---------EQNPPPGSPPSTAQAQQEETDSGAPAGAGTEAASS 322
>gi|297841929|ref|XP_002888846.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
gi|297334687|gb|EFH65105.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
Length = 685
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 186/419 (44%), Gaps = 70/419 (16%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + E +L + F++ V V + D T+RS G AYV +A PE ASRA++ L
Sbjct: 60 LYVGDLDPSVDEPQLLDLFNQVAPVQTVRVCRDL-TRRSLGYAYVNFANPEDASRAMDSL 118
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ + + R + +M S++ + +G +K + S + KA
Sbjct: 119 NYAPIRDRPIRIM------LSNRDPSTRLSGKGNVFIKNL--------DPSIDNKALYET 164
Query: 421 FMRPDTVV------ENIARKHGVSKSDLLDREANDLAV----RIALGETQVIAETKKALT 470
F T++ + + R G E A+ + L + QV
Sbjct: 165 FSAFGTILSCKVAMDAVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVG------ 218
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVIL---- 526
+ ++ S ++ + R +V+ VKNLP + ++ EL K FGK+G + ++
Sbjct: 219 ----HFVRRQDRSRSESGAVPRFTNVY-VKNLPKEITDDELKKTFGKYGDISSAVVMKDQ 273
Query: 527 -PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAV 585
++++ V F P EAAA +A ++ G+ L DVL K +++
Sbjct: 274 SGNSRSFGFVNFESP-EAAA----VAVEKMNGISLG-----EDVLYVGRAQKKSER---- 319
Query: 586 VGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRI 645
E + +R ++++ ++++ +L++KNL+ DE L++ F E+ G +
Sbjct: 320 --EEELRRKFEQERISRF-------EKLQGSNLYLKNLDDSVNDEKLKEMFSEY---GNV 367
Query: 646 LSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQ 704
S KV + N + +S GFGF+ + S E A+ ++ G ++ L + K++ +
Sbjct: 368 TSCKV---MMNSQGLSRGFGFVAYSSPEEASRALSEMNGKMIGRKPLYVAFAQRKEERR 423
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNLPK +T+D L+ F + G+I+ A +M+ + G SR F F+ F + + A A++
Sbjct: 238 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFESPEAAAVAVEK 297
Query: 61 FN 62
N
Sbjct: 298 MN 299
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
E L+ L+++NL + +++L+E FS++GNV+ ++++ S+G +V Y+ PE A
Sbjct: 336 EKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSSPEEA 394
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKK 379
SRA+ ++ + + L+V A+ K+
Sbjct: 395 SRALSEMNGKMIGRKPLYVAFAQRKE 420
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S + +KNL V +++L++ FS+ G +T K+M G SR F F+ + + +EA A+
Sbjct: 341 SNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSSPEEASRALSE 400
Query: 61 FNKSYLDTCRISCEIARK 78
N + + A++
Sbjct: 401 MNGKMIGRKPLYVAFAQR 418
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 135/306 (44%), Gaps = 49/306 (16%)
Query: 287 SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
S++D + G +F++NL + L E FS FG + + +D RSKG +V
Sbjct: 133 SNRDPSTRLSGKGNVFIKNLDPSIDNKALYETFSAFGTILSCKVAMDA-VGRSKGYGFVQ 191
Query: 347 YAIPESASRAIEVL------DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTL-KQ 399
+ E+A AI+ L D +F G H + + + S+ + T+ K L K+
Sbjct: 192 FEKEETAQAAIDKLNGMLLNDKQVFVG---HFVRRQDRSRSESGAVPRFTNVYVKNLPKE 248
Query: 400 RREEERKAS--------------EASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLD 444
++E K + + SGN++++ + F P+ + + +G+S +
Sbjct: 249 ITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFESPEAAAVAVEKMNGISLGE--- 305
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPY 504
D+ + +G Q +E ++ L E+ + + L+ SN +KNL
Sbjct: 306 ----DV---LYVGRAQKKSEREEELRR------KFEQERISRFEKLQGSN--LYLKNLDD 350
Query: 505 DSSEGELAKMFGKFGSLD--KVILPS---TKTLALVVFLEPVEAAAAFKGLAYKRYKGVP 559
++ +L +MF ++G++ KV++ S ++ V + P EA+ A + K P
Sbjct: 351 SVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSSPEEASRALSEMNGKMIGRKP 410
Query: 560 LYLEWA 565
LY+ +A
Sbjct: 411 LYVAFA 416
>gi|226497258|ref|NP_001140274.1| uncharacterized protein LOC100272318 [Zea mays]
gi|194698792|gb|ACF83480.1| unknown [Zea mays]
gi|414883568|tpg|DAA59582.1| TPA: ribonucleoprotein [Zea mays]
Length = 341
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 13/131 (9%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ GRLFV NLPYT T +EL + FS+ G V + I+ DK T RS+G A+V A E A++A
Sbjct: 110 DPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKA 169
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA 416
I++ D ++ GR V + E+ + T T+ RR ++ +GN
Sbjct: 170 IQMFDGALLGGRTARV---------NYPEVPRGGERRTVTMSGRRRDDGTYKIYAGNL-G 219
Query: 417 WNSLFMRPDTV 427
W +R DT+
Sbjct: 220 WG---VRADTL 227
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKY 60
R+ V NLP T + L FS+ G + DA+++ K +SR FAF+ T +EA +AI+
Sbjct: 113 RLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQM 172
Query: 61 FNKSYLD--TCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRG 113
F+ + L T R++ P +PR R ++ +D + A G
Sbjct: 173 FDGALLGGRTARVNY--------PEVPRGGERRTVTMSGRRRDDGTYKIYAGNLG 219
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+++ NL + D LR F + + ++ +++T RS+G +V ++ E A A+E
Sbjct: 212 KIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALES 271
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNS 419
LD +GR L + A E + T + ++EE + A G T+A +S
Sbjct: 272 LDGVELEGRSLRLSLA---------EQNPPPGSPPSTAQAQQEETDSGAPAGGGTEAASS 322
>gi|15228191|ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana]
gi|2062166|gb|AAB63640.1| poly(A)-binding protein isolog [Arabidopsis thaliana]
gi|9279720|dbj|BAB01277.1| poly(A) binding protein-like [Arabidopsis thaliana]
gi|332642284|gb|AEE75805.1| poly(A) binding protein 6 [Arabidopsis thaliana]
Length = 537
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 185/416 (44%), Gaps = 64/416 (15%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G L+V +L TE +L + FS V VH+ + T +S AY+ + P SAS A+
Sbjct: 21 GSLYVGDLSPDVTEKDLIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPFSASNAMT 80
Query: 359 VLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWN 418
L++S +G+ + +M ++ + ++ + K L ++S +
Sbjct: 81 RLNHSDLKGKAMRIMWSQRDLAYRRRTRTGFANLYVKNL-----------DSSITSSCLE 129
Query: 419 SLFMRPDTVVE-NIARKHGVSKSD---LLDREANDLAVRIALGETQVIAETKKALTNAGV 474
+F +++ + ++G SK D E + ++ R AL + V KK +
Sbjct: 130 RMFCPFGSILSCKVVEENGQSKGFGFVQFDTEQSAVSARSALHGSMVYG--KKLFVAKFI 187
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVI-----LPST 529
N AG D S +V+ VKNL ++ L +F ++G++ V+ + +
Sbjct: 188 NKDERAAM-AGNQD----STNVY-VKNLIETVTDDCLHTLFSQYGTVSSVVVMRDGMGRS 241
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVG-- 587
+ V F P A A + L G+ L G++K VG
Sbjct: 242 RGFGFVNFCNPENAKKAMESLC-----GLQL-----------------GSKK--LFVGKA 277
Query: 588 -EHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRIL 646
+ D +R +L+Q+ +D I + +L+VKNL+ + LR+ FG + G+I+
Sbjct: 278 LKKDERREMLKQKF---SDNFIAKPNMRWSNLYVKNLSESMNETRLREIFGCY---GQIV 331
Query: 647 SVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD 702
S KV H +NG+ S GFGF+ F + E + R L G ++DG +++++ K+D
Sbjct: 332 SAKVMCH-ENGR--SKGFGFVCFSNCEESKQAKRYLNGFLVDGKPIVVRVAERKED 384
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S + VKNL + + E RLR+ F G+I AK+M ++G+S+ F F+ F +E+++A +Y
Sbjct: 304 SNLYVKNLSESMNETRLREIFGCYGQIVSAKVMCHENGRSKGFGFVCFSNCEESKQAKRY 363
Query: 61 FNKSYLDTCRISCEIARK 78
N +D I +A +
Sbjct: 364 LNGFLVDGKPIVVRVAER 381
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+S ++V+NL T T+D L FS++G VS V +V+ RS+G +V + PE+A +A
Sbjct: 200 DSTNVYVKNLIETVTDDCLHTLFSQYGTVSSV-VVMRDGMGRSRGFGFVNFCNPENAKKA 258
Query: 357 IEVL 360
+E L
Sbjct: 259 MESL 262
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ + VKNL + VT+D L FSQ G ++ +MR G+SR F F+ F + A++A+
Sbjct: 202 TNVYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRDGMGRSRGFGFVNFCNPENAKKAM 259
>gi|213409529|ref|XP_002175535.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212003582|gb|EEB09242.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 621
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 178/427 (41%), Gaps = 85/427 (19%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L++ L TE L E F+ G V+ + + D T+RS G AYV + E +A+
Sbjct: 68 SASLYIGELDPMVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKAL 127
Query: 358 EVLDNSIFQGRLLHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQR 400
+ L+ ++ +GR +M P+ K + D + LH++ S K L +
Sbjct: 128 DELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCK 187
Query: 401 REEERKASEASGNTKAWNSLFMRPDTV-VENIARKHGVSKSDLLDREANDLAVRIALGET 459
A + GN+K + F+ D+V N A +H LL ND V +
Sbjct: 188 -----VAVDELGNSKGYG--FVHFDSVDSANAAIEH--VNGMLL----NDKKVYV----- 229
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
G ++S + S K + LK + VKNL D++E E K+F K+G
Sbjct: 230 -------------GHHISRRDRQS--KFEALKANFTNVYVKNLDLDTTEEEFTKLFEKYG 274
Query: 520 SLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
+ + L + A V F A A L YKG LY+ A
Sbjct: 275 KITSLSLAKDNAGKFRGFAFVNFATHDSAQQAVDELNDFEYKGKKLYVGRA--------- 325
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRK 634
K +++ + + +++ + +LE + ++ + +LFVKNL + DE L+
Sbjct: 326 -QKKHERQEELRKQYE------QMKLEKI-------NKYQGVNLFVKNLQDEIDDERLKS 371
Query: 635 HFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALIL 694
F G I S KV + + N S GFGF+ + + E AT ++ +L G L +
Sbjct: 372 EFSAF---GTITSAKV---MTDENNKSKGFGFVCYSNPEEATKAIAEMNQRMLAGKPLYV 425
Query: 695 QLCHAKK 701
L K+
Sbjct: 426 ALAQRKE 432
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ++RL+ FS G IT AK+M ++ KS+ F F+ + +EA +AI N
Sbjct: 355 LFVKNLQDEIDDERLKSEFSAFGTITSAKVMTDENNKSKGFGFVCYSNPEEATKAIAEMN 414
Query: 63 KSYLDTCRISCEIARK 78
+ L + +A++
Sbjct: 415 QRMLAGKPLYVALAQR 430
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL TE+ F + G+IT L + GK R FAF+ F T A++A+
Sbjct: 250 TNVYVKNLDLDTTEEEFTKLFEKYGKITSLSLAKDNAGKFRGFAFVNFATHDSAQQAVDE 309
Query: 61 FN 62
N
Sbjct: 310 LN 311
>gi|70929373|ref|XP_736758.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56511564|emb|CAH81841.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 297
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 107/237 (45%), Gaps = 21/237 (8%)
Query: 331 VVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS------DKQ 384
+ + D K A+V + P S +A L+ +I++G++L V AR K + +K
Sbjct: 62 IANIDLTNVKTYAFVSFVFPSSCEKAKNNLNETIYKGKILSVKYAREKIDNSENLEKNKN 121
Query: 385 ELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD 444
+ S +KT ++ E +K N WN L+ ++ + N ++ +L+
Sbjct: 122 NIFIKLSNESKTSYKKILEIQKKRNCQ-NENIWNILYTDINSNIYNFCKETNCDPQSILN 180
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEF--------------SAGKTDGL 490
++AV ++L ET +I + K+ + G+ + + E+ K
Sbjct: 181 IRDKNIAVNVSLTETFIINKMKEWIRKEGIVLEAFEQIYKKENAKPENDEKDETDKVIKY 240
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAF 547
KRS+ +VKNL ++E ++ +F K G L K+ K +A++ + +P +A A
Sbjct: 241 KRSDDTIIVKNLSMHTNENDIINLFKKHGILKKISFSPYKNIAILQYEKPEDAKKAL 297
>gi|327301713|ref|XP_003235549.1| Nucleolar protein 4 [Trichophyton rubrum CBS 118892]
gi|326462901|gb|EGD88354.1| Nucleolar protein 4 [Trichophyton rubrum CBS 118892]
Length = 696
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 157/385 (40%), Gaps = 83/385 (21%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+ V++LP T + L ++FSQ + A + + + +S+ + F+ F ++A+ A +
Sbjct: 49 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAREL 108
Query: 62 NKSYLDTCRISCEIA----RKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKT 117
N S + +I E+A R++ D + + K KE+ E + L K +
Sbjct: 109 NNSVFEGKKIKIELAEPRHREI-DEKQGKSVPSSAPSKAKELKEKRRLESLPPKLIIRNL 167
Query: 118 IEKVTENDDPQLLEFLQVMQPRVK----SKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
+TE PQ LE L ++K K + G + + K +E + + G E
Sbjct: 168 PWSITE---PQHLELLFRSYGKIKHAVVPKKGSRVAGFGFVVMRGRKNAERAIEGVNGKE 224
Query: 174 -KSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGD 232
TL V DW+ + E +S
Sbjct: 225 VDGRTLAV--------------------------------------DWAVEKDEWESMNK 246
Query: 233 DDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGV---GEEDANGEIVDPGNPSSSSK 289
+ DG+EE GD C+ + ++ H V GE DAN E + G ++
Sbjct: 247 AAGESDGKEEA-------GD----CEEAVAENEHLDVVDDGESDANSEDEEDGGVELVNE 295
Query: 290 DVQQEV-----------------LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVV 332
D +++ + +F+RNLP++AT++ L EHFSKFG V +V+
Sbjct: 296 DEDEDISMGDAEDDELEEEEEDDRNASTIFIRNLPFSATDETLHEHFSKFGPVRYARVVL 355
Query: 333 DKDTKRSKGIAYVLYAIPESASRAI 357
D T+R KG A+V + E AS I
Sbjct: 356 DPATERPKGTAFVCFYKAEDASSCI 380
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFVR+LP TAT + L E+FS+ + +V+D TK+SKG +V + E A A L
Sbjct: 49 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAREL 108
Query: 361 DNSIFQGRLLHVMPA--RHKKSSDKQ--ELHNSTSQGTKTLKQRR 401
+NS+F+G+ + + A RH++ +KQ + +S K LK++R
Sbjct: 109 NNSVFEGKKIKIELAEPRHREIDEKQGKSVPSSAPSKAKELKEKR 153
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 276 GEIVDPGNPSSSSKDVQQEVLES--GRLFVRNLPYTATEDE-LREHFSKFGNVSEVHIVV 332
G+ V PS + + ++ LES +L +RNLP++ TE + L F +G + H VV
Sbjct: 135 GKSVPSSAPSKAKELKEKRRLESLPPKLIIRNLPWSITEPQHLELLFRSYGKIK--HAVV 192
Query: 333 DKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
K R G +V+ ++A RAIE ++ GR L V
Sbjct: 193 PKKGSRVAGFGFVVMRGRKNAERAIEGVNGKEVDGRTLAV 232
>gi|398410055|ref|XP_003856481.1| hypothetical protein MYCGRDRAFT_31414 [Zymoseptoria tritici IPO323]
gi|339476366|gb|EGP91457.1| hypothetical protein MYCGRDRAFT_31414 [Zymoseptoria tritici IPO323]
Length = 740
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 152/355 (42%), Gaps = 59/355 (16%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIKYF 61
+ V+ LP T + L + FS+ + A + K R + F+ F ++A +A F
Sbjct: 58 LFVRQLPSNTTSESLTELFSETFPVKHATAVTDPATKECRGYGFVTFADAEDAAQAKSQF 117
Query: 62 NKSYLDTCRISCEIA---RKVGDPN--MPRPWSRYSLKKEKEVSEDEK----NPVLAAKR 112
+ +D ++ EIA ++V D + MP+ + KK E + K N + KR
Sbjct: 118 HGHIIDGKKLRVEIAEPRKRVADADGEMPKKVEHNASKKPDEPVQPTKLIVRNLPWSIKR 177
Query: 113 GEKKTIEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGG 172
G++ +EK+ L F +V + + K GLMA G
Sbjct: 178 GDQ--LEKL-------FLSFGKVKKAYIPKKG------PGLMA----------------G 206
Query: 173 EKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGD 232
+ + K + I E A + + D ++ VK + ++E++ + +
Sbjct: 207 FGFVLMRGKKNAEKAIEGVNGKEIDGRTLAVDWAVEKDTYEDLVKGE----KAEEEVSNE 262
Query: 233 DDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQ 292
+D D D EEE +ND + I S D E+ G+ +++
Sbjct: 263 EDIDIDAAEEEMIDND--------------EEIESDDASSDGGAELDSEGDEDEDESNLR 308
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
+ S LF+RNLP+T T+++L +HF++FGN +V+D T+RSKG +V +
Sbjct: 309 KPDDRSSTLFIRNLPFTCTDEDLEDHFAQFGNTRYARVVMDYGTERSKGTGFVCF 363
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 38/188 (20%)
Query: 557 GVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESR 616
G ++ AP D Q +K N AV D K A ++Q+ R
Sbjct: 13 GAAAAVDSAPEDRAEQLLPTKENLTTAAVDAPADEKEAAVQQR----------------R 56
Query: 617 SLFVKNLNFKTCDENLRKHFGE--HIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
SLFV+ L T E+L + F E +K ++ K + G+GF+ F E
Sbjct: 57 SLFVRQLPSNTTSESLTELFSETFPVKHATAVTDPATKECR-------GYGFVTFADAED 109
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKK-----DEQVVKKAEKDKS--------STKLLVR 721
A G I+DG L +++ +K D ++ KK E + S TKL+VR
Sbjct: 110 AAQAKSQFHGHIIDGKKLRVEIAEPRKRVADADGEMPKKVEHNASKKPDEPVQPTKLIVR 169
Query: 722 NVAFEAQR 729
N+ + +R
Sbjct: 170 NLPWSIKR 177
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFVR LP T + L E FS+ V V D TK +G +V +A E A++A
Sbjct: 58 LFVRQLPSNTTSESLTELFSETFPVKHATAVTDPATKECRGYGFVTFADAEDAAQAKSQF 117
Query: 361 DNSIFQGRLLHVMPARHKK 379
I G+ L V A +K
Sbjct: 118 HGHIIDGKKLRVEIAEPRK 136
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 98/254 (38%), Gaps = 43/254 (16%)
Query: 462 IAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEG-ELAKMFGKFGS 520
IAE +K + +A + E +A K +V+NLP+ G +L K+F FG
Sbjct: 131 IAEPRKRVADADGEMPKKVEHNASKKPDEPVQPTKLIVRNLPWSIKRGDQLEKLFLSFGK 190
Query: 521 LDKVILPS-----TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
+ K +P V+ A A +G+ K G L ++WA + +
Sbjct: 191 VKKAYIPKKGPGLMAGFGFVLMRGKKNAEKAIEGVNGKEIDGRTLAVDWA-VEKDTYEDL 249
Query: 576 SKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRV---------------------- 613
KG + + V E D E+++ D +I+ D
Sbjct: 250 VKGEKAEEEVSNEEDIDIDAAEEEMID-NDEEIESDDASSDGGAELDSEGDEDEDESNLR 308
Query: 614 ----ESRSLFVKNLNFKTCDENLRKHFGE--HIKEGRILSVKVKKHLKNGKNVSMGFGFI 667
S +LF++NL F DE+L HF + + + R++ + G S G GF+
Sbjct: 309 KPDDRSSTLFIRNLPFTCTDEDLEDHFAQFGNTRYARVV-------MDYGTERSKGTGFV 361
Query: 668 EFDSVETATNVCRD 681
F + + A R+
Sbjct: 362 CFYNKDDADACVRE 375
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 273 DANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATE-DELREHFSKFGNVSEVHIV 331
DA+GE+ P ++ E ++ +L VRNLP++ D+L + F FG V + +I
Sbjct: 140 DADGEM--PKKVEHNASKKPDEPVQPTKLIVRNLPWSIKRGDQLEKLFLSFGKVKKAYIP 197
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
K G +VL ++A +AIE ++ GR L V
Sbjct: 198 -KKGPGLMAGFGFVLMRGKKNAEKAIEGVNGKEIDGRTLAV 237
>gi|392558545|gb|EIW51732.1| polyadenylate binding protein [Trametes versicolor FP-101664 SS1]
Length = 631
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 169/406 (41%), Gaps = 49/406 (12%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L T TE L E F+ G V+ + + D T+RS G AYV Y RA+
Sbjct: 6 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 65
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
E L+ S+ +GR +M S + T QG +K +E+ ++A +T A
Sbjct: 66 EQLNYSLIKGRACRIM------WSQRDPALRKTGQGNIFIKNL--DEQIDNKALHDTFAA 117
Query: 418 NSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVS 477
+ + R G EA + A++ G ++ KK G ++S
Sbjct: 118 FGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAVNG---MLLNDKKVYV--GHHIS 172
Query: 478 SLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTL 532
E S K + +K VKN+ + ++ E ++F FG + +L ++
Sbjct: 173 RKERQS--KIEEMKNQFTNIYVKNVDPEVTQEEFVQLFEPFGRITSAVLQVDDEGKSRGF 230
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
V F EA AA + L KG L++ A Q + E + +
Sbjct: 231 GFVNFDTHEEAHAAVEALHDSDVKGRKLFVARA------QKKAER----------EEELR 274
Query: 593 RALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK 652
R+ + ++E ++ + + +L++KNL DE LR GE G I S KV
Sbjct: 275 RSYEQAKMEKMS-------KYQGVNLYIKNLEDDIDDERLR---GEFEPFGNITSAKV-- 322
Query: 653 HLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
+++ K +S GFGF+ F S + AT ++ ++ L + L
Sbjct: 323 -MRDEKGISKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQ 367
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + ++RLR F G IT AK+MR + G S+ F F+ F + EA +A+ N
Sbjct: 293 LYIKNLEDDIDDERLRGEFEPFGNITSAKVMRDEKGISKGFGFVCFSSPDEATKAVAEMN 352
Query: 63 KSYLDTCRISCEIARK 78
+ T + +A++
Sbjct: 353 NKMIGTKPLYVSLAQR 368
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I VKN+ VT++ F G IT A L +GKSR F F+ F T +EA A++
Sbjct: 188 TNIYVKNVDPEVTQEEFVQLFEPFGRITSAVLQVDDEGKSRGFGFVNFDTHEEAHAAVEA 247
Query: 61 FNKS 64
+ S
Sbjct: 248 LHDS 251
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + + L D F+ G + K+ + G+S+ + F+ + T + AE AIK N
Sbjct: 97 IFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAVN 156
Query: 63 KSYLDTCRISC--EIARK 78
L+ ++ I+RK
Sbjct: 157 GMLLNDKKVYVGHHISRK 174
>gi|409045875|gb|EKM55355.1| hypothetical protein PHACADRAFT_255926 [Phanerochaete carnosa
HHB-10118-sp]
Length = 672
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 172/413 (41%), Gaps = 49/413 (11%)
Query: 291 VQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIP 350
V Q S L+V L T +E L E F+ G V+ + + D T+RS G AYV Y
Sbjct: 41 VPQLPSPSASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNA 100
Query: 351 ESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEA 410
RA+E L+ S+ +GR +M S + T QG +K +E ++A
Sbjct: 101 ADGERALEQLNYSLIKGRACRIM------WSQRDPALRKTGQGNIFIKNL--DEAIDNKA 152
Query: 411 SGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALT 470
+T A + + R G EA + A++ G ++ KK
Sbjct: 153 LHDTFAAFGNVLSCKVATDEQGRSKGYGFVHYETAEAAETAIKAVNG---MLLNDKKVYV 209
Query: 471 NAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-- 528
G ++S E S K D ++ VKNL + S E ++F +FG++ ++ +
Sbjct: 210 --GHHISKKERQS--KLDEIRAQFTNIYVKNLDPEVSLEEFTQLFEQFGNVTSAVIQTDE 265
Query: 529 ---TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAV 585
+K V F EA A GL Y G L++ S+ +K +
Sbjct: 266 EGNSKGFGFVNFEFHEEAQNAVDGLHDTEYNGRKLFV-------------SRAQKKAER- 311
Query: 586 VGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRI 645
E + +++ ++E ++ + + +L++KNL+ + DE LR F G I
Sbjct: 312 --EEELRKSYEHAKMEKMS-------KYQGVNLYIKNLDDEIDDERLRAEFEPF---GTI 359
Query: 646 LSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
S KV +++ K S GFGF+ F S + AT ++ ++ L + L
Sbjct: 360 TSAKV---MRDEKGSSKGFGFVCFSSPDEATKAVAEMNNKMIGAKPLYVSLAQ 409
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + ++RLR F G IT AK+MR + G S+ F F+ F + EA +A+ N
Sbjct: 335 LYIKNLDDEIDDERLRAEFEPFGTITSAKVMRDEKGSSKGFGFVCFSSPDEATKAVAEMN 394
Query: 63 KSYLDTCRISCEIARK 78
+ + +A++
Sbjct: 395 NKMIGAKPLYVSLAQR 410
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + + L D F+ G + K+ + G+S+ + F+ + T + AE AIK N
Sbjct: 139 IFIKNLDEAIDNKALHDTFAAFGNVLSCKVATDEQGRSKGYGFVHYETAEAAETAIKAVN 198
Query: 63 KSYLD 67
L+
Sbjct: 199 GMLLN 203
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ I VKNL V+ + F Q G +T A + ++G S+ F F+ F +EA+ A+
Sbjct: 230 TNIYVKNLDPEVSLEEFTQLFEQFGNVTSAVIQTDEEGNSKGFGFVNFEFHEEAQNAV 287
>gi|401886540|gb|EJT50568.1| polyadenylate-binding protein [Trichosporon asahii var. asahii CBS
2479]
Length = 686
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 175/426 (41%), Gaps = 49/426 (11%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
P P+ +S QQ+ S L+V L + TE L E F+ G V+ + + D T+RS
Sbjct: 39 PAQPAPTSTTGQQQPGNSASLYVGELDPSVTEAMLFEIFNMVGPVASIRVCRDAVTRRSL 98
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
G AYV Y RA+E L+ S+ + R +M S + T QG +K
Sbjct: 99 GYAYVNYLNAADGERALEHLNYSLIKNRPCRIM------WSQRDPALRKTGQGNIFIKNL 152
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
+++ ++A +T A + + G + EA D A++ G
Sbjct: 153 --DDKIDNKALHDTFAAFGNILSCKVATDENGNSRGFAFVHYETGEAADAAIKSVNG--- 207
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
++ KK G ++S E S + K +N +KNL + ++ +L MF FG
Sbjct: 208 MLLNDKKVYV--GHHISKKERQSKVEEQRAKFTN--IFIKNLEPEFTQKDLEDMFKPFGE 263
Query: 521 LDKVILPS-----TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
+ L +K A V + A A L K G LY+ A
Sbjct: 264 IVSAALSVGEDGLSKGFAFVNYTTHDAAKKAVDELNDKEINGKKLYVGRA---------- 313
Query: 576 SKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKH 635
K ++++ + H+ +R E + GV +L+VKN++ + D+ LR
Sbjct: 314 QKRAERDEELRRMHEERRLENESKTAGV-------------NLYVKNIDDEWDDDRLRSE 360
Query: 636 FGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
F G I S KV +++ K S GFGF+ F + AT +++ G ++ L +
Sbjct: 361 FD---FAGTITSAKV---MRDDKGASRGFGFVCFSQPDEATRAVQEMNGKMIGTKPLYVS 414
Query: 696 LCHAKK 701
L K+
Sbjct: 415 LAQKKE 420
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKN+ +DRLR F G IT AK+MR G SR F F+ F EA A++ N
Sbjct: 343 LYVKNIDDEWDDDRLRSEFDFAGTITSAKVMRDDKGASRGFGFVCFSQPDEATRAVQEMN 402
Query: 63 KSYLDTCRISCEIARK 78
+ T + +A+K
Sbjct: 403 GKMIGTKPLYVSLAQK 418
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I +KNL T+ L D F GEI A L +DG S+ FAF+ + T A++A+
Sbjct: 238 TNIFIKNLEPEFTQKDLEDMFKPFGEIVSAALSVGEDGLSKGFAFVNYTTHDAAKKAVDE 297
Query: 61 FNKSYLDTCRISCEIARK 78
N ++ ++ A+K
Sbjct: 298 LNDKEINGKKLYVGRAQK 315
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + L D F+ G I K+ ++G SR FAF+ + T + A+ AIK N
Sbjct: 147 IFIKNLDDKIDNKALHDTFAAFGNILSCKVATDENGNSRGFAFVHYETGEAADAAIKSVN 206
Query: 63 KSYLDTCRI 71
L+ ++
Sbjct: 207 GMLLNDKKV 215
>gi|406698471|gb|EKD01707.1| polyadenylate-binding protein [Trichosporon asahii var. asahii CBS
8904]
Length = 686
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 175/426 (41%), Gaps = 49/426 (11%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
P P+ +S QQ+ S L+V L + TE L E F+ G V+ + + D T+RS
Sbjct: 39 PAQPAPTSTTGQQQPGNSASLYVGELDPSVTEAMLFEIFNMVGPVASIRVCRDAVTRRSL 98
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
G AYV Y RA+E L+ S+ + R +M S + T QG +K
Sbjct: 99 GYAYVNYLNAADGERALEHLNYSLIKNRPCRIM------WSQRDPALRKTGQGNIFIKNL 152
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
+++ ++A +T A + + G + EA D A++ G
Sbjct: 153 --DDKIDNKALHDTFAAFGNILSCKVATDENGNSRGFAFVHYETGEAADAAIKSVNG--- 207
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
++ KK G ++S E S + K +N +KNL + ++ +L MF FG
Sbjct: 208 MLLNDKKVYV--GHHISKKERQSKVEEQRAKFTN--IFIKNLEPEFTQKDLEDMFKPFGE 263
Query: 521 LDKVILPS-----TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
+ L +K A V + A A L K G LY+ A
Sbjct: 264 IVSAALSVGEDGLSKGFAFVNYTTHDAAKKAVDELNDKEINGKKLYVGRA---------- 313
Query: 576 SKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKH 635
K ++++ + H+ +R E + GV +L+VKN++ + D+ LR
Sbjct: 314 QKRAERDEELRRMHEERRLENESKTAGV-------------NLYVKNIDDEWDDDRLRSE 360
Query: 636 FGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
F G I S KV +++ K S GFGF+ F + AT +++ G ++ L +
Sbjct: 361 FD---FAGTITSAKV---MRDDKGASRGFGFVCFSQPDEATRAVQEMNGKMIGTKPLYVS 414
Query: 696 LCHAKK 701
L K+
Sbjct: 415 LAQKKE 420
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKN+ +DRLR F G IT AK+MR G SR F F+ F EA A++ N
Sbjct: 343 LYVKNIDDEWDDDRLRSEFDFAGTITSAKVMRDDKGASRGFGFVCFSQPDEATRAVQEMN 402
Query: 63 KSYLDTCRISCEIARK 78
+ T + +A+K
Sbjct: 403 GKMIGTKPLYVSLAQK 418
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I +KNL T+ L D F GEI A L +DG S+ FAF+ + T A++A+
Sbjct: 238 TNIFIKNLEPEFTQKDLEDMFKPFGEIVSAALSVGEDGLSKGFAFVNYTTHDAAKKAVDE 297
Query: 61 FNKSYLDTCRISCEIARK 78
N ++ ++ A+K
Sbjct: 298 LNDKEINGKKLYVGRAQK 315
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + L D F+ G I K+ ++G SR FAF+ + T + A+ AIK N
Sbjct: 147 IFIKNLDDKIDNKALHDTFAAFGNILSCKVATDENGNSRGFAFVHYETGEAADAAIKSVN 206
Query: 63 KSYLDTCRI 71
L+ ++
Sbjct: 207 GMLLNDKKV 215
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 285 SSSSKDVQQEV--LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
+SS+ + Q + + S +LFV L YT E LR+ FS +G + + I+VD+DT RS+G
Sbjct: 15 TSSNPTLYQAIRCMSSSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGF 74
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQE 385
++ YA E AS AI LD GR L V A + S + +
Sbjct: 75 GFITYAAEEQASSAIMALDGKDLHGRNLRVSAATERTSGFRND 117
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAI 58
S++ V L E LRD FS GEI DAK++ +D G+SR F FI + E++A AI
Sbjct: 31 SKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQASSAI 89
>gi|19526272|gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 175/406 (43%), Gaps = 45/406 (11%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L TE L E FS G V + + D T+RS G AYV ++ P A RA++ +
Sbjct: 13 LYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDTM 72
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ + +G+ + +M ++ S K + N K L + S + KA
Sbjct: 73 NFDVVKGKPIRIMWSQRDPSLRKSGVGNVF---IKNL-----------DKSIDNKALYDT 118
Query: 421 FMRPDTVVEN--IARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSS 478
F ++ + ++G + E D A R ++ +K S
Sbjct: 119 FSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVG---RFKS 175
Query: 479 LEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFL 538
+E A K +V+ +KN D + L ++F K+G KTL++ V +
Sbjct: 176 RKEREAELGAKAKEFTNVY-IKNFGDDMDDERLKELFDKYG----------KTLSVKVMM 224
Query: 539 EPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQ 598
+P + F ++Y++++ +E L+ + G + + + ++A L++
Sbjct: 225 DPTGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQ------KKNERQAELKR 278
Query: 599 QLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGK 658
+ E + I R + +L++KNL+ DE LRK F G I S KV L+ G+
Sbjct: 279 KFEMLKQERIS--RYQGVNLYIKNLDDTIDDEKLRKEFSPF---GSITSAKV--MLEEGR 331
Query: 659 NVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQ 704
S GFGF+ F S E AT ++ G I+ L + L K++ +
Sbjct: 332 --SKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERK 375
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+++NL T +++LR+ FS FG+++ +++++ RSKG +V ++ PE A++A+ +
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEG--RSKGFGFVCFSSPEEATKAVTEM 353
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ 392
+ I + L+V A +K K L N Q
Sbjct: 354 NGRIVGSKPLYVALA-QRKEERKAHLTNQYMQ 384
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G +F++NL + L + FS FGN+ +V D++ SKG A+V + ++A RAIE
Sbjct: 99 GNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIE 156
Query: 359 VL------DNSIFQGRL 369
+ D +F GR
Sbjct: 157 KMNGMLLNDRKVFVGRF 173
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + +++LR FS G IT AK+M ++G+S+ F F+ F + +EA +A+ N
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVM-LEEGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 355 GRIVGSKPLYVALAQR 370
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KN + ++RL++ F + G+ K+M GKSR F F+ + ++A +A++
Sbjct: 191 TNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRGFGFVSYEKHEDANKAVED 250
Query: 61 FNKSYLD 67
N + L+
Sbjct: 251 MNGTELN 257
>gi|74096251|ref|NP_001027768.1| glycine rich RNA binding protein [Ciona intestinalis]
gi|5911800|emb|CAB56042.1| glycine rich RNA binding protein [Ciona intestinalis]
Length = 162
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ + ++FV NL Y ATED+LR+HFS G V EV I+ D++T RS+G A+V ++ A+
Sbjct: 1 MANCKVFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEAND 60
Query: 356 AIEVLDNSIFQGRLLHVMPARHKK 379
AIE L+ S +GR + V A+ K+
Sbjct: 61 AIENLNESDVRGRNVSVRQAQSKR 84
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKY 60
++ V NL TED LR FS G++ + ++ ++ G+SR FAF+ F +E EA +AI+
Sbjct: 5 KVFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEANDAIEN 64
Query: 61 FNKS 64
N+S
Sbjct: 65 LNES 68
>gi|225442420|ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Vitis vinifera]
Length = 630
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 177/418 (42%), Gaps = 57/418 (13%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L L+V +L +E EL + FS G + V + D + +S AYV + P AS+
Sbjct: 26 LHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDASK 85
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
A+ L+++ G+ + +M + K L N K L + S N+
Sbjct: 86 ALACLNHTKLMGKPMRIMWSHRDPLPRKTGLANLF---VKNL-----------DPSINSA 131
Query: 416 AWNSLFMRPDTVVE-NIARKHGVSKS-DLLDREANDLAVRIALGETQVIAETKKALTNAG 473
+ +F + ++ +A ++G SK + +++D A + + KK +
Sbjct: 132 SLQDIFCKFGNILSCKVAEENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKF 191
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVIL-----PS 528
V +E S + K +N VKNL D +E + F +FG + V++
Sbjct: 192 VKKCERKEAS----EETKFTN--VYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGK 245
Query: 529 TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGE 588
++ V F P EA A + L G L G++K +
Sbjct: 246 SRGFGFVNFESPDEAKKAVEAL-----NGAML-----------------GSKKLFVGRAQ 283
Query: 589 HDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSV 648
A+R L + + + + +I ++ + +L+VKNL+ D+ L++HF G+I S
Sbjct: 284 KKAERQELLKHEKEMVNCNIGKEK--ASNLYVKNLDASVDDDKLQEHFSSC---GQITSA 338
Query: 649 KVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV 706
KV +H +S GFGF+ F + E A L GT+L G +L + + K+D Q V
Sbjct: 339 KVMRH---DSGLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQRKEDRQRV 393
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S + VKNL V +D+L++ FS G+IT AK+MR G S+ F F+ F T +EA++A+
Sbjct: 309 SNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTT 368
Query: 61 FNKSYLDTCRISCEIARK 78
N + L + +A++
Sbjct: 369 LNGTLLHGRSLYIAMAQR 386
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 49/78 (62%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + +TED +RD FS+ G++ +M+ +GKSR F F+ F + EA++A++
Sbjct: 207 TNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEA 266
Query: 61 FNKSYLDTCRISCEIARK 78
N + L + ++ A+K
Sbjct: 267 LNGAMLGSKKLFVGRAQK 284
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+++VKNL ++ +R F E K G ++ +K+G S GFGF+ F+S + A
Sbjct: 208 NVYVKNLGEDLTEDIIRDKFSEFGKVGTVVI------MKDGNGKSRGFGFVNFESPDEAK 261
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKD 712
L G +L L + K + Q + K EK+
Sbjct: 262 KAVEALNGAMLGSKKLFVGRAQKKAERQELLKHEKE 297
>gi|170593753|ref|XP_001901628.1| RNA recognition motif. [Brugia malayi]
gi|158590572|gb|EDP29187.1| RNA recognition motif [Brugia malayi]
Length = 358
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKH---LKNGKNVSMGFGFIEFDSVE 673
+LFVKNL+FKT DE LR F RI S + K K +SMGFGFI F E
Sbjct: 164 TLFVKNLSFKTTDEGLRNKFESRF---RIRSATISKKRDATDATKTLSMGFGFITFYQPE 220
Query: 674 TATNVCRDLQGTILDGHALILQLCH 698
A +D+QG +LDGH L+L+L H
Sbjct: 221 DAQQAIKDMQGVLLDGHCLMLKLSH 245
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 287 SSKDVQQEVLESGRLFVRNLPYTATEDELREHF-SKF----GNVSEVHIVVDKDTKRSKG 341
++K+ ++L LFV+NL + T++ LR F S+F +S+ D S G
Sbjct: 151 NAKEKDDQLLPGTTLFVKNLSFKTTDEGLRNKFESRFRIRSATISKKRDATDATKTLSMG 210
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK 383
++ + PE A +AI+ + + G L + + + SDK
Sbjct: 211 FGFITFYQPEDAQQAIKDMQGVLLDGHCLMLKLSHREVVSDK 252
>gi|242047468|ref|XP_002461480.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
gi|241924857|gb|EER98001.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
Length = 338
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 13/131 (9%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ GRLFV NLPYT T +EL + F++ G V + I+ DK T RS+G A+V A E A++A
Sbjct: 108 DPGRLFVGNLPYTYTSEELAQVFAEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKA 167
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA 416
I++ D ++ GR V + E+ + T T+ RR ++ +GN
Sbjct: 168 IQMFDGALLGGRTARV---------NYPEVPRGGERRTVTMAGRRRDDGTYKIYAGNL-G 217
Query: 417 WNSLFMRPDTV 427
W +R DT+
Sbjct: 218 WG---VRADTL 225
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIK 59
R+ V NLP T + L F++ G + DA+++ K +SR FAF+ T +EA +AI+
Sbjct: 110 GRLFVGNLPYTYTSEELAQVFAEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQ 169
Query: 60 YFNKSYLD--TCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRG 113
F+ + L T R++ P +PR R ++ +D + A G
Sbjct: 170 MFDGALLGGRTARVNY--------PEVPRGGERRTVTMAGRRRDDGTYKIYAGNLG 217
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+++ NL + D LR F + + ++ +++T RS+G +V + E A A+E
Sbjct: 210 KIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFRTAEDAQAALEA 269
Query: 360 LDNSIFQGRLLHV 372
LD +GR L +
Sbjct: 270 LDGVELEGRPLRL 282
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKY 60
+I NL V D LR+ F + + DA+++ ++ G+SR F F+ FRT ++A+ A++
Sbjct: 210 KIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFRTAEDAQAALEA 269
Query: 61 FNKSYLDTCRISCEIA 76
+ L+ + +A
Sbjct: 270 LDGVELEGRPLRLSLA 285
>gi|169610962|ref|XP_001798899.1| hypothetical protein SNOG_08590 [Phaeosphaeria nodorum SN15]
gi|111062638|gb|EAT83758.1| hypothetical protein SNOG_08590 [Phaeosphaeria nodorum SN15]
Length = 742
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 156/365 (42%), Gaps = 65/365 (17%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIKY 60
++ V+ L VT L DFFS+ I +A ++ K+ K S++F F+ F ++A+ A +
Sbjct: 42 QLFVRGLAPSVTTQDLTDFFSESYPIKNALVVLDKETKESKKFGFVTFADVEDAQRAKEE 101
Query: 61 FNKSYLDTCRISCEIA---RKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKT 117
L +I + A ++ G+P P+ +R+ +++E+E+ + + ++ R +
Sbjct: 102 MKGKELQGKKIVMDFAEARQREGEPKDPKLANRFKVQREQEMKDAQAPKIIV--RNLPWS 159
Query: 118 IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSIT 177
I K E L + +V + K +A + K +E Q + G E
Sbjct: 160 I-KTPEQLGKHFLSYGKVNFVTLPKKPSGELRGFAFVALRGKKHAERAIQGLNGKE---- 214
Query: 178 LHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDD 237
D + D D D ++ K ++ + +D AG +DDD+
Sbjct: 215 ----IDGRTIAVD--------------WAVDRDTWQGLQK---TEQDGDDAKAGAEDDDE 253
Query: 238 D---------------GEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPG 282
D EE E+N+ DSN + + + GV +D
Sbjct: 254 DMSDAESSVVSSEDDSDAEEGSEDNEDLDDSNTDYEDVDDSDEEGGVQLDD--------- 304
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
++ E +FVRNLP+T T++ L+EHF +FG V +V+D++T+R KG
Sbjct: 305 ---------ERPKREEFTVFVRNLPFTVTDESLKEHFEQFGGVRFARVVLDRETERPKGT 355
Query: 343 AYVLY 347
+V +
Sbjct: 356 GFVSF 360
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
D PS+++ +EV +LFVR L + T +L + FS+ + +V+DK+TK
Sbjct: 22 ADAETPSTAAAATPKEVARR-QLFVRGLAPSVTTQDLTDFFSESYPIKNALVVLDKETKE 80
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGR--LLHVMPARHKKSSDK-QELHNSTSQGTK 395
SK +V +A E A RA E + QG+ ++ AR ++ K +L N
Sbjct: 81 SKKFGFVTFADVEDAQRAKEEMKGKELQGKKIVMDFAEARQREGEPKDPKLANR------ 134
Query: 396 TLKQRREEERKASEA 410
K +RE+E K ++A
Sbjct: 135 -FKVQREQEMKDAQA 148
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 18/135 (13%)
Query: 604 TDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMG 663
T A P V R LFV+ L ++L F E L V + K K K
Sbjct: 29 TAAAATPKEVARRQLFVRGLAPSVTTQDLTDFFSESYPIKNALVV-LDKETKESKK---- 83
Query: 664 FGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDE------------QVVKKAE- 710
FGF+ F VE A +++G L G +++ A++ E +V ++ E
Sbjct: 84 FGFVTFADVEDAQRAKEEMKGKELQGKKIVMDFAEARQREGEPKDPKLANRFKVQREQEM 143
Query: 711 KDKSSTKLLVRNVAF 725
KD + K++VRN+ +
Sbjct: 144 KDAQAPKIIVRNLPW 158
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 276 GEIVDP--GNPSSSSKDVQQEVLESGRLFVRNLPYT-ATEDELREHFSKFGNVSEVHIVV 332
GE DP N ++ + + ++ ++ VRNLP++ T ++L +HF +G V+ V +
Sbjct: 124 GEPKDPKLANRFKVQREQEMKDAQAPKIIVRNLPWSIKTPEQLGKHFLSYGKVNFV-TLP 182
Query: 333 DKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
K + +G A+V + A RAI+ L+ GR + V
Sbjct: 183 KKPSGELRGFAFVALRGKKHAERAIQGLNGKEIDGRTIAV 222
>gi|353245170|emb|CCA76234.1| related to Nucleolar protein NOP4 [Piriformospora indica DSM 11827]
Length = 850
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 135/290 (46%), Gaps = 34/290 (11%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+F+ NLPYTAT +L+ HFS + +V++K+TK SKG+ YV +++ E A + +E
Sbjct: 28 VFISNLPYTATSTDLKTHFSDIAPIKNAFVVLEKETKVSKGVGYVTFSLREDAEQCVE-- 85
Query: 361 DNSI-FQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEER-KASEASG-NTKAW 417
S+ GR+L V A ++ ++ N+ +G + K R + KA +A+ T
Sbjct: 86 KGSVEMNGRMLRVSWA----AAKGEQGENAQPKGQRPSKVVRSPVKDKAHDATAVRTIII 141
Query: 418 NSLFMRPDTVV--ENIARKHGVSKSDL----LDREANDLAVRIAL-GETQVIAETKKALT 470
L D+ V + + ++ G + +D + + TQ + +K
Sbjct: 142 TGLPTGIDSKVLWKKVRKQEGAETLEFPFKNVDGSEDPTKANVVFTSPTQALHAVEK--L 199
Query: 471 NAGVNVSSLEEFSAGKTDGLK--RSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS 528
NA V SL + K K RS+ +V+NLP+D+++ +L +F G++ + +P+
Sbjct: 200 NAHVYKGSLLGVTLKKRLEKKPNRSSR-LIVRNLPWDTTDSDLRALFLPHGAVYSIEIPT 258
Query: 529 -------------TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
K A V L +A A +G+ K K PL ++WA
Sbjct: 259 DKVDGQHEGRKPKAKGFAFVWMLSRADAEKAIEGVNGKSLKERPLAVDWA 308
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
LF+RN+P+ ATEDE+R+ FG + V IV+D+++ RSKG A+ Y E A + I
Sbjct: 378 LFIRNVPWEATEDEMRQLLRGFGPLRYVRIVIDQESGRSKGTAFACYWNKEDADKVI 434
>gi|225428865|ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147839912|emb|CAN65906.1| hypothetical protein VITISV_004873 [Vitis vinifera]
Length = 648
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 182/432 (42%), Gaps = 85/432 (19%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + +L + FS+ G V V + D T+RS G YV Y+ P+ A+RA++VL
Sbjct: 32 LYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVL 91
Query: 361 DNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ + G+ + +M P+ K K D + LH++ S L
Sbjct: 92 NFTPLNGKPIRIMYSHRDPSIRKSGTGNIFIKNLDKGIDHKALHDTFSAFGNILSC---- 147
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIA 463
+ A++ASG +K HG + D EA A+ G ++
Sbjct: 148 -KVATDASGMSKG------------------HGFVQFD--SEEAAQKAIDKLNG---MLL 183
Query: 464 ETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDK 523
K+ V E T ++ N+VF VKN+ +E +L ++FG+FG +
Sbjct: 184 NDKQVFVGPFVRKQERES-----TINKEKFNNVF-VKNISEGMTEEDLTRIFGEFGPITS 237
Query: 524 VIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKG 578
V++ +K V F +AA + + L +++ EW K
Sbjct: 238 VVVMRDGDGKSKCFGFVNFENVDDAAMSVEALNGQKFDDK----EW---------YVGKA 284
Query: 579 NQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE 638
+K++ E + K + E V D+ + +L++KNL+ D+ L++ F +
Sbjct: 285 QKKSER---EIELKSRFEQNMKEAV-------DKFQGANLYIKNLDDSIGDDKLKELFAQ 334
Query: 639 HIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
G I S KV +++ +S G GF+ F S E A+ ++ ++ L + L
Sbjct: 335 F---GTITSCKV---MRDPNGLSRGSGFVAFSSPEEASRALAEMNSKMVVSKPLYVALAQ 388
Query: 699 AKKDEQVVKKAE 710
K+D + +A+
Sbjct: 389 RKEDRRARLQAQ 400
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KNL + +D+L++ F+Q G IT K+MR +G SR F+ F + +EA A+
Sbjct: 312 ANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEASRALAE 371
Query: 61 FNKSYLDTCRISCEIARK 78
N + + + +A++
Sbjct: 372 MNSKMVVSKPLYVALAQR 389
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ L+++NL + +D+L+E F++FG ++ ++ D + S+G +V ++ PE ASR
Sbjct: 309 FQGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNG-LSRGSGFVAFSSPEEASR 367
Query: 356 AIEVLDNSIFQGRLLHVMPARHKK 379
A+ +++ + + L+V A+ K+
Sbjct: 368 ALAEMNSKMVVSKPLYVALAQRKE 391
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKN+ + +TE+ L F + G IT +MR DGKS+ F F+ F +A +++ N
Sbjct: 211 VFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSKCFGFVNFENVDDAAMSVEALN 270
Query: 63 KSYLD 67
D
Sbjct: 271 GQKFD 275
>gi|71003994|ref|XP_756663.1| hypothetical protein UM00516.1 [Ustilago maydis 521]
gi|46095735|gb|EAK80968.1| hypothetical protein UM00516.1 [Ustilago maydis 521]
Length = 1077
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFV LPYTAT +L+ FS+ G + +V D+ TK+SKG+ YV +AIPE A+ A+E L
Sbjct: 50 LFVSRLPYTATTTDLQTMFSEIGPLKRAFVVTDQATKKSKGVGYVTFAIPEDATTALEQL 109
Query: 361 DNSIFQG--RLLHVMPARHKKSSDKQELHNSTSQGTKT-LKQRREEERKASEASG 412
G R + + A K + + L G+ + LK+ R E K A G
Sbjct: 110 QGKSLDGGSRKIQITFADQKDPTGTKRLTTKADPGSPSALKRPRTESTKPPRAKG 164
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 36/61 (59%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E LFVRNLPY ATE+ELR F FG + I +DK T RSKG +V + SA A
Sbjct: 607 EGTTLFVRNLPYQATEEELRNLFRSFGPLRYAKITMDKTTNRSKGTGFVCFWQASSADAA 666
Query: 357 I 357
+
Sbjct: 667 L 667
>gi|148927167|ref|ZP_01810792.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
gi|147887382|gb|EDK72831.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
Length = 108
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +LF+ +L Y T+D LR HF++ G V E +V D+D+ RSKG +V Y E A AI
Sbjct: 2 SKKLFIGSLAYATTDDSLRAHFAEKGEVEEAKVVTDRDSGRSKGFGFVTYVNDEDADTAI 61
Query: 358 EVLDNSIFQGRLLHVMPARHKK 379
+ LDNS GR +HV AR ++
Sbjct: 62 KELDNSELDGRNIHVNEARPRE 83
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKY 60
++ + +L T+D LR F++KGE+ +AK++ +D G+S+ F F+ + +++A+ AIK
Sbjct: 4 KLFIGSLAYATTDDSLRAHFAEKGEVEEAKVVTDRDSGRSKGFGFVTYVNDEDADTAIKE 63
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRP 87
+ S LD I AR P RP
Sbjct: 64 LDNSELDGRNIHVNEAR----PREERP 86
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S+ LF+ +L + T D++LR HF E +G + KV +G+ S GFGF+ + + E
Sbjct: 2 SKKLFIGSLAYATTDDSLRAHFAE---KGEVEEAKVVTDRDSGR--SKGFGFVTYVNDED 56
Query: 675 ATNVCRDLQGTILDGHAL 692
A ++L + LDG +
Sbjct: 57 ADTAIKELDNSELDGRNI 74
>gi|222623613|gb|EEE57745.1| hypothetical protein OsJ_08262 [Oryza sativa Japonica Group]
Length = 369
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 282 GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
G+ S S + Q +++ RLFV L + +E LR F FG + EV I++DK +KRSKG
Sbjct: 248 GDDSFKSSEATQAEVKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKG 307
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
A++ Y E+ A++ ++ I G ++ V A+H +S D+Q ++++ + + L+ R
Sbjct: 308 YAFIEYTTEEAGGAALKAMNGQIINGWMIVVDVAKH-RSRDRQPPYSASGRSNQVLRSR 365
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 613 VESRSLFVKNLNFKTCDENLR---KHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEF 669
V+++ LFV L+F T ++ LR + FGE + E +I+ K+ K K G+ FIE+
Sbjct: 262 VKTKRLFVTGLSFYTSEKTLRAAFEPFGELV-EVKIIMDKISKRSK-------GYAFIEY 313
Query: 670 DSVETATNVCRDLQGTILDGHALILQLC-HAKKDEQ 704
+ E + + G I++G +++ + H +D Q
Sbjct: 314 TTEEAGGAALKAMNGQIINGWMIVVDVAKHRSRDRQ 349
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIKY 60
R+ V L Y +E LR F GE+ + K++ K K S+ +AFI + TE+ A+K
Sbjct: 266 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGAALKA 325
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWS 89
N ++ I ++A+ P P+S
Sbjct: 326 MNGQIINGWMIVVDVAKHRSRDRQP-PYS 353
>gi|115448473|ref|NP_001048016.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|46390469|dbj|BAD15930.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|46390865|dbj|BAD16369.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113537547|dbj|BAF09930.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|218191513|gb|EEC73940.1| hypothetical protein OsI_08808 [Oryza sativa Indica Group]
Length = 399
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 282 GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
G+ S S + Q +++ RLFV L + +E LR F FG + EV I++DK +KRSKG
Sbjct: 278 GDDSFKSSEATQAEVKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKG 337
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
A++ Y E+ A++ ++ I G ++ V A+H +S D+Q ++++ + + L+ R
Sbjct: 338 YAFIEYTTEEAGGAALKAMNGQIINGWMIVVDVAKH-RSRDRQPPYSASGRSNQVLRSR 395
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 613 VESRSLFVKNLNFKTCDENLR---KHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEF 669
V+++ LFV L+F T ++ LR + FGE + E +I+ K+ K K G+ FIE+
Sbjct: 292 VKTKRLFVTGLSFYTSEKTLRAAFEPFGELV-EVKIIMDKISKRSK-------GYAFIEY 343
Query: 670 DSVETATNVCRDLQGTILDGHALILQLC-HAKKDEQ 704
+ E + + G I++G +++ + H +D Q
Sbjct: 344 TTEEAGGAALKAMNGQIINGWMIVVDVAKHRSRDRQ 379
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIKY 60
R+ V L Y +E LR F GE+ + K++ K K S+ +AFI + TE+ A+K
Sbjct: 296 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGAALKA 355
Query: 61 FNKSYLDTCRISCEIAR 77
N ++ I ++A+
Sbjct: 356 MNGQIINGWMIVVDVAK 372
>gi|4803739|dbj|BAA77512.1| cold-inducible RNA-binding protein [Ciona intestinalis]
Length = 158
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ + ++FV NL Y ATED+LR+HFS G V EV I+ D++T RS+G A+V ++ A+
Sbjct: 1 MANCKVFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEAND 60
Query: 356 AIEVLDNSIFQGRLLHVMPARHKK 379
AIE L+ S GR + V A+ K+
Sbjct: 61 AIENLNESDVAGRNVSVRQAQSKR 84
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKY 60
++ V NL TED LR FS G++ + ++ ++ G+SR FAF+ F +E EA +AI+
Sbjct: 5 KVFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEANDAIEN 64
Query: 61 FNKS 64
N+S
Sbjct: 65 LNES 68
>gi|126342235|ref|XP_001367420.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 635
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 171/411 (41%), Gaps = 55/411 (13%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L +E L E FS G + + + D T+RS G AYV + P A RA+E +
Sbjct: 13 LYVGDLHPEVSEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALETM 72
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ + +G+ + +M ++ S K + N K L + S + KA
Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGNIF---IKNL-----------DKSIDNKALFDT 118
Query: 421 FMRPDTVV--ENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSS 478
F ++ + + +HG + E D A R ++ +K S
Sbjct: 119 FSAFGNILSCKVVCDEHGSKGYGFVHFETRDAAERAIDKMNGMLLNDRKVFVG---RFKS 175
Query: 479 LEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG-SLDKVILP----STKTLA 533
+E A K +V+ +KN D + L ++FGKFG SL ++ ++K
Sbjct: 176 RKEREAELGARAKEFTNVY-IKNFGEDMDDLRLKRLFGKFGPSLSVKVMTDESGTSKGFG 234
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKR 593
V F +A A + + K G +Y+ A KG ++ +
Sbjct: 235 FVNFERHEDAQKAVEEMNGKELNGKKIYVGRA---------QKKGERQTE---------- 275
Query: 594 ALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKH 653
L+++ E + I R + +L+VKNL+ DE LRK F G I S KV
Sbjct: 276 --LKRKFEQLKQDRI--TRYQGVNLYVKNLDDGIDDERLRKEFSPF---GTITSAKV--M 326
Query: 654 LKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQ 704
++ G+N GFGF+ F S E AT ++ G I+ L + L K++ Q
Sbjct: 327 MEGGRN--KGFGFVCFSSPEEATKAVTEMNGRIVATKPLYIALAQRKEERQ 375
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ++RLR FS G IT AK+M + G+++ F F+ F + +EA +A+ N
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVM-MEGGRNKGFGFVCFSSPEEATKAVTEMN 354
Query: 63 KSYLDTCRISCEIARK 78
+ T + +A++
Sbjct: 355 GRIVATKPLYIALAQR 370
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G +F++NL + L + FS FGN+ +V D+ SKG +V + ++A RAI+
Sbjct: 99 GNIFIKNLDKSIDNKALFDTFSAFGNILSCKVVCDEHG--SKGYGFVHFETRDAAERAID 156
Query: 359 VL------DNSIFQGRL 369
+ D +F GR
Sbjct: 157 KMNGMLLNDRKVFVGRF 173
>gi|410898224|ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
Length = 653
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 175/406 (43%), Gaps = 45/406 (11%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L TE L E FS G V + + D T+RS G AYV ++ P A RA++ +
Sbjct: 13 LYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDTM 72
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ + +G+ + +M ++ S K + N K + S + KA
Sbjct: 73 NFDVVKGKPIRIMWSQRDPSLRKSGVGNVFI--------------KNLDKSIDNKALYDT 118
Query: 421 FMRPDTVV--ENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSS 478
F ++ + + ++G + E D A R ++ +K S
Sbjct: 119 FSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVG---RFKS 175
Query: 479 LEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVVFL 538
+E A K +V+ +KN D + L ++F K+G KTL++ V +
Sbjct: 176 RKEREAELGAKAKEFTNVY-IKNFGDDMDDERLKELFDKYG----------KTLSVKVMM 224
Query: 539 EPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQ 598
+P + F ++Y++++ +E L+ + G + + + ++A L++
Sbjct: 225 DPTGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQ------KKNERQAELKR 278
Query: 599 QLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGK 658
+ E + I R + +L++KNL+ DE LRK F G I S KV L+ G+
Sbjct: 279 KFEMLKQERIS--RYQGVNLYIKNLDDTIDDEKLRKEFSPF---GSITSAKV--MLEEGR 331
Query: 659 NVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQ 704
S GFGF+ F S E AT ++ G I+ L + L K++ +
Sbjct: 332 --SKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERK 375
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+++NL T +++LR+ FS FG+++ +++++ RSKG +V ++ PE A++A+ +
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEEG--RSKGFGFVCFSSPEEATKAVTEM 353
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ 392
+ I + L+V A+ +K K L N Q
Sbjct: 354 NGRIVGSKPLYVALAQ-RKEERKAHLTNQYMQ 384
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G +F++NL + L + FS FGN+ +V D++ SKG A+V + ++A RAIE
Sbjct: 99 GNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIE 156
Query: 359 VL------DNSIFQGRL 369
+ D +F GR
Sbjct: 157 KMNGMLLNDRKVFVGRF 173
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + +++LR FS G IT AK+M ++G+S+ F F+ F + +EA +A+ N
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVM-LEEGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 355 GRIVGSKPLYVALAQR 370
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KN + ++RL++ F + G+ K+M GKSR F F+ + ++A +A++
Sbjct: 191 TNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRGFGFVSYEKHEDANKAVED 250
Query: 61 FNKSYLD 67
N + L+
Sbjct: 251 MNGTELN 257
>gi|387196381|gb|AFJ68758.1| rna binding motif protein 19 [Nannochloropsis gaditana CCMP526]
Length = 291
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 69/131 (52%), Gaps = 16/131 (12%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL---------KNGKN------ 659
S +LFVKNLNF T +E L HF + R +++ K + GK+
Sbjct: 51 SFTLFVKNLNFATSEEKLLAHFKSKTQGVRTVAIPKKTAPVGAARAVSKETGKSNADQPA 110
Query: 660 VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLL 719
+SMG+GF+E+ V A R ++GT LDGH L +L K+ V A+ + TKL+
Sbjct: 111 LSMGYGFVEYAGVAQAQAALRAMEGTDLDGHRLQCKLS-TKRLSARVPPAKNREKRTKLV 169
Query: 720 VRNVAFEAQRK 730
VRNVAF+A K
Sbjct: 170 VRNVAFQATPK 180
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+++ V+N+ T +++ F+ G++ +L + DG R FAF+ F T QEA A
Sbjct: 166 TKLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSHRGFAFVEFLTAQEANNAFVA 225
Query: 61 FNKSYLDTCRISCEIA 76
+ ++L R+ E A
Sbjct: 226 LSSTHLYGKRLVLEWA 241
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 606 ADIDP--DRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMG 663
A + P +R + L V+N+ F+ + +++ F G++ +V++ K G
Sbjct: 154 ARVPPAKNREKRTKLVVRNVAFQATPKEVKELFAGF---GKVKTVRLPKKFDGSHR---G 207
Query: 664 FGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD-EQVVKKAEKD 712
F F+EF + + A N L T L G L+L+ K+D E + +KA KD
Sbjct: 208 FAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDKEDVETLREKATKD 257
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L VRN+ + AT E++E F+ FG V V + D +G A+V + + A+ A
Sbjct: 167 KLVVRNVAFQATPKEVKELFAGFGKVKTVRLPKKFDGSH-RGFAFVEFLTAQEANNAFVA 225
Query: 360 LDNSIFQGRLL 370
L ++ G+ L
Sbjct: 226 LSSTHLYGKRL 236
>gi|308806325|ref|XP_003080474.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
gi|116058934|emb|CAL54641.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
Length = 504
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 183/425 (43%), Gaps = 88/425 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + TE +L E FS G V + + D T+RS G AYV + A+ AI+VL
Sbjct: 34 LYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSSSDAAHAIDVL 93
Query: 361 DNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQ-GTKTLKQRRE 402
+ + G+ + V+ PA + K+ D + L ++ +Q GT T
Sbjct: 94 NFQVINGKPIRVLYSQRDPAVRRSGVGNIFIKNLDKAIDNKALLDTFAQFGTIT------ 147
Query: 403 EERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI 462
+ A +++GN+K + F++ +T A V+ +L D++
Sbjct: 148 SAKVAMDSAGNSKGYG--FVQFETAEAAQAAIDNVNGMELNDKQ---------------- 189
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
V V + + T G + N+V+ VKNL + S+ +L + F + G++
Sbjct: 190 -----------VYVGPFQRRADRSTQGEAKFNNVY-VKNLSENLSDEKLREKFAEHGAVT 237
Query: 523 KVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
++ +K V F P AA+A + L Y E + V+ ++ K
Sbjct: 238 SCVIMKDEEGKSKGFGFVCFESPEGAASAVENL--------DGYTEDEKTWVVCRA--QK 287
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
++ + + +A+R +++E + A+ L++KNL T DE LR+ F
Sbjct: 288 KAEREAELKAKFEAER---RERMEKMAGAN----------LYIKNLEEGTDDEKLRELFN 334
Query: 638 EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
E G I S +V +++ S G F+ F S + AT ++ G ++ L + L
Sbjct: 335 EF---GTITSCRV---MRDASGASRGSAFVAFSSPDEATRAVTEMNGKMVGAKPLYVALA 388
Query: 698 HAKKD 702
K++
Sbjct: 389 QRKEE 393
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
+ E + L+++NL +++LRE F++FG ++ ++ D + S+G A+V ++ P+
Sbjct: 306 RMEKMAGANLYIKNLEEGTDDEKLRELFNEFGTITSCRVMRDA-SGASRGSAFVAFSSPD 364
Query: 352 SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELH 387
A+RA+ ++ + + L+V A+ K+ H
Sbjct: 365 EATRAVTEMNGKMVGAKPLYVALAQRKEEPHAGRWH 400
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + +++LR+ F++ G IT ++MR G SR AF+ F + EA A+ N
Sbjct: 315 LYIKNLEEGTDDEKLRELFNEFGTITSCRVMRDASGASRGSAFVAFSSPDEATRAVTEMN 374
Query: 63 KSYLDTCRISCEIARKVGDPNMPR 86
+ + +A++ +P+ R
Sbjct: 375 GKMVGAKPLYVALAQRKEEPHAGR 398
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 39/57 (68%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
+ VKNL + +++++LR+ F++ G +T +M+ ++GKS+ F F+ F + + A A++
Sbjct: 212 VYVKNLSENLSDEKLREKFAEHGAVTSCVIMKDEEGKSKGFGFVCFESPEGAASAVE 268
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL K + L D F+Q G IT AK+ G S+ + F+ F T + A+ AI N
Sbjct: 122 IFIKNLDKAIDNKALLDTFAQFGTITSAKVAMDSAGNSKGYGFVQFETAEAAQAAIDNVN 181
Query: 63 KSYLD 67
L+
Sbjct: 182 GMELN 186
>gi|260944998|ref|XP_002616797.1| hypothetical protein CLUG_04038 [Clavispora lusitaniae ATCC 42720]
gi|238850446|gb|EEQ39910.1| hypothetical protein CLUG_04038 [Clavispora lusitaniae ATCC 42720]
Length = 620
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 191/464 (41%), Gaps = 86/464 (18%)
Query: 285 SSSSKDVQQE--VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
SS ++D Q E + S L+V L + E L E FS G VS + + D TK+S G
Sbjct: 35 SSETEDSQGESVAVTSASLYVGELNPSVNEAVLYEIFSPLGQVSSIRVCRDAVTKKSLGY 94
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKS-----------------SDKQE 385
AYV Y E RA+E L+ S+ GR +M ++ S D +
Sbjct: 95 AYVNYHKHEDGERALEQLNYSLIDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPDIDNKA 154
Query: 386 LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDR 445
LH++ S + L + A++ G +K + F+ +T A V+ L DR
Sbjct: 155 LHDTFSAFGRILSC-----KVATDEHGRSKCFG--FVHYETAEAADAAIENVNGMSLNDR 207
Query: 446 EANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYD 505
E + +G+ I++ + V+ EE A T+ VF VKN D
Sbjct: 208 E-------VFVGKH--ISKKDR--------VAKFEEMKANFTN-------VF-VKNFGSD 242
Query: 506 SSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPL 560
+E ELA MF +G + + +K + F A A + L K G +
Sbjct: 243 FTEAELAAMFEPYGKITSLYFEKDSEGKSKGFGFINFENHDAAVKAVEELNDKEVNGQKI 302
Query: 561 YLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFV 620
Y+ A K ++ + + +++ R + +GV +LFV
Sbjct: 303 YVGRA----------QKKRERIEELKKQYETTRLEKLSKYQGV-------------NLFV 339
Query: 621 KNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCR 680
KNL+ E L + F G I S KV + GK S GFGF+ F + E AT
Sbjct: 340 KNLDDSLTSEMLEEEFKPF---GTITSAKVMVD-ETGK--SKGFGFVCFSAPEEATKAIT 393
Query: 681 DLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVA 724
++ ++ G L + L +KD + + ++ ++ ++ ++N A
Sbjct: 394 EMNQRMVLGKPLYVALAQ-RKDVRRSQLEQQIQARNQMRMQNAA 436
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL +T + L + F G IT AK+M + GKS+ F F+ F +EA +AI N
Sbjct: 337 LFVKNLDDSLTSEMLEEEFKPFGTITSAKVMVDETGKSKGFGFVCFSAPEEATKAITEMN 396
Query: 63 K 63
+
Sbjct: 397 Q 397
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ S +LF+ + Y+ ED LRE F+K+G V E +++D++T RS+G +V + E+AS
Sbjct: 36 CMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVETRVILDRETGRSRGFGFVTFTSSEAAS 95
Query: 355 RAIEVLDNSIFQGRLLHVMPARHKKS 380
AI+ LD GR++ V A + S
Sbjct: 96 SAIQALDGRDLHGRVVKVNYANDRTS 121
>gi|193650237|ref|XP_001943392.1| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 650
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 185/452 (40%), Gaps = 95/452 (21%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L TE L E FS G + + + T+ S G AYV + A RA++ +
Sbjct: 4 LYVGDLHSDVTEAMLFEKFSTVGAILSIRVCRHVITRSSLGYAYVNFQNIADAERALDTM 63
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ I +G + +M QR RK+ N
Sbjct: 64 NFDILKGHPMRIM-----------------------WSQRDPSLRKSG-------VGNVF 93
Query: 421 FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ-------VIAETKKALTNAG 473
D ++N A D N L+ ++A ET V ETK++ T +
Sbjct: 94 IKNLDRSIDNKA------MYDTFSAFGNILSCKVAQDETGNSKGYGFVHFETKQSATQSI 147
Query: 474 VNVSSL----EEFSAGKTDG-----------LKRSNHVFLVKNLPYDSSEGELAKMFGKF 518
V+ + ++ G+ G K +V+ +KN+ + +E EL +MF K+
Sbjct: 148 EKVNGMLLNGKKVFVGRFVGRNDREKELGQRAKLYTNVY-IKNIDENVNEKELFEMFKKY 206
Query: 519 GSLD--KVILP---STKTLALVVFLEPVEAAAAFKGLAYKRY-KGVPLYLEWAPSDVLSQ 572
G++ KV+ S++ V F +P EA A L K+ +G Y+ A Q
Sbjct: 207 GTITSCKVMFKDDGSSRGFGFVAFEDPKEAEKAVTELHGKKSPEGKTYYVNRA------Q 260
Query: 573 SSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENL 632
T + + + KR + ++E + +R + +L+VKNL+ DE L
Sbjct: 261 KKTER----------QQELKRKFEQYKIERI-------NRYQGVNLYVKNLDDTIDDERL 303
Query: 633 RKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHAL 692
R+ F G I S KV + +G+ S GFGF+ F S E AT D+ G I+ L
Sbjct: 304 RREFSAF---GTIKSAKVM--MDDGR--SKGFGFVYFSSPEEATKAVTDMNGRIVGTKPL 356
Query: 693 ILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVA 724
+ L KKD + ++ + +T + ++++
Sbjct: 357 YVTLAQRKKDRKAHLDSQYSQRNTNMRMQSIG 388
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ + +KN+ + V E L + F + G IT K+M DG SR F F+ F +EAE+A+
Sbjct: 183 TNVYIKNIDENVNEKELFEMFKKYGTITSCKVMFKDDGSSRGFGFVAFEDPKEAEKAV 240
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ++RLR FS G I AK+M DG+S+ F F+ F + +EA +A+ N
Sbjct: 289 LYVKNLDDTIDDERLRREFSAFGTIKSAKVM-MDDGRSKGFGFVYFSSPEEATKAVTDMN 347
Query: 63 KSYLDTCRISCEIARK 78
+ T + +A++
Sbjct: 348 GRIVGTKPLYVTLAQR 363
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G +F++NL + + + FS FGN+ + D +T SKG +V + +SA+++IE
Sbjct: 90 GNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQD-ETGNSKGYGFVHFETKQSATQSIE 148
Query: 359 VLDNSIFQGRLLHV 372
++ + G+ + V
Sbjct: 149 KVNGMLLNGKKVFV 162
>gi|413951602|gb|AFW84251.1| putative peptidase C48 domain family protein [Zea mays]
Length = 1335
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 52/87 (59%), Gaps = 9/87 (10%)
Query: 535 VVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRA 594
VVF+E +EA AFK L Y RYK PLYLE AP ++LS +S D V D KR
Sbjct: 1028 VVFVEAIEAQYAFKKLLYTRYKDTPLYLECAPENILSPTSAPV-----DEEVKNEDGKRI 1082
Query: 595 L----LEQQLEGVTDADIDPDRVESRS 617
L ++Q +EGV+ DIDPDRVE S
Sbjct: 1083 LTKANIDQTVEGVSAEDIDPDRVEVAS 1109
>gi|297743165|emb|CBI36032.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 175/418 (41%), Gaps = 57/418 (13%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L L+V +L +E EL + FS G + V + D + +S AYV + P AS+
Sbjct: 26 LHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDASK 85
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
A+ L+++ G+ + +M + K L N K + S N+
Sbjct: 86 ALACLNHTKLMGKPMRIMWSHRDPLPRKTGLANLFV--------------KNLDPSINSA 131
Query: 416 AWNSLFMRPDTVVE-NIARKHGVSKS-DLLDREANDLAVRIALGETQVIAETKKALTNAG 473
+ +F + ++ +A ++G SK + +++D A + + KK +
Sbjct: 132 SLQDIFCKFGNILSCKVAEENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKF 191
Query: 474 VNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVIL-----PS 528
V +E S + K +N VKNL D +E + F +FG + V++
Sbjct: 192 VKKCERKEAS----EETKFTN--VYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGK 245
Query: 529 TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGE 588
++ V F P EA A + L + G++K +
Sbjct: 246 SRGFGFVNFESPDEAKKAVEAL----------------------NGAMLGSKKLFVGRAQ 283
Query: 589 HDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSV 648
A+R L + + + + +I ++ + +L+VKNL+ D+ L++HF G+I S
Sbjct: 284 KKAERQELLKHEKEMVNCNIGKEK--ASNLYVKNLDASVDDDKLQEHFSSC---GQITSA 338
Query: 649 KVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV 706
KV +H +S GFGF+ F + E A L GT+L G +L + + K+D Q V
Sbjct: 339 KVMRH---DSGLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQRKEDRQRV 393
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S + VKNL V +D+L++ FS G+IT AK+MR G S+ F F+ F T +EA++A+
Sbjct: 309 SNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTT 368
Query: 61 FNKSYL 66
N + L
Sbjct: 369 LNGTLL 374
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 49/78 (62%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + +TED +RD FS+ G++ +M+ +GKSR F F+ F + EA++A++
Sbjct: 207 TNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEA 266
Query: 61 FNKSYLDTCRISCEIARK 78
N + L + ++ A+K
Sbjct: 267 LNGAMLGSKKLFVGRAQK 284
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+++VKNL ++ +R F E K G ++ +K+G S GFGF+ F+S + A
Sbjct: 208 NVYVKNLGEDLTEDIIRDKFSEFGKVGTVVI------MKDGNGKSRGFGFVNFESPDEAK 261
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKD 712
L G +L L + K + Q + K EK+
Sbjct: 262 KAVEALNGAMLGSKKLFVGRAQKKAERQELLKHEKE 297
>gi|413951601|gb|AFW84250.1| putative peptidase C48 domain family protein [Zea mays]
Length = 1344
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 52/87 (59%), Gaps = 9/87 (10%)
Query: 535 VVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRA 594
VVF+E +EA AFK L Y RYK PLYLE AP ++LS +S D V D KR
Sbjct: 1037 VVFVEAIEAQYAFKKLLYTRYKDTPLYLECAPENILSPTSAPV-----DEEVKNEDGKRI 1091
Query: 595 L----LEQQLEGVTDADIDPDRVESRS 617
L ++Q +EGV+ DIDPDRVE S
Sbjct: 1092 LTKANIDQTVEGVSAEDIDPDRVEVAS 1118
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 187/439 (42%), Gaps = 93/439 (21%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V +L + + +L + F++ G V V + D T+RS G YV Y A+RA+
Sbjct: 39 STSLYVGDLDLSVNDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNYNAAHEATRAL 98
Query: 358 EVLDNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQR 400
+ L+ + G+ + +M P K KS D + LH++ S L +
Sbjct: 99 DELNFTPLNGKPIRIMYSYRDPTIRKSGAGNIFIKNLDKSIDNKALHDTFSTFGNILSCK 158
Query: 401 REEERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGET 459
A+++ G ++ + + F ++ I + +G + L +
Sbjct: 159 -----VATDSLGQSRGYGFVQFDNEESAKSAIDKLNG-----------------MLLNDK 196
Query: 460 QVIAETKKALTNAGVNVSSLE-EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKF 518
QV G + E E +A KT R N+V+ VKNL ++E +L K+FG+F
Sbjct: 197 QVFV---------GPFLRKQERESTADKT----RFNNVY-VKNLSETTTEDDLKKIFGEF 242
Query: 519 GSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQS 573
G + + +K V F +P +AA + + L K++ EW
Sbjct: 243 GIITSTAVMRDADGKSKCFGFVNFDDPDDAARSVEALNGKKFDDK----EW--------- 289
Query: 574 STSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADI--DPDRVESRSLFVKNLNFKTCDEN 631
VG+ K+ E +L+G + + D+ E +L+VKNL+ D+
Sbjct: 290 -----------YVGKAQ-KKYEREMELKGKFEQSLKETADKFEGLNLYVKNLDDSISDDK 337
Query: 632 LRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHA 691
L++ F E G I S KV +++ +S G GF+ F + E A+ ++ G ++
Sbjct: 338 LKELFSEF---GTITSCKV---MRDPNGISRGSGFVAFSTAEEASKALTEMNGKMVVSKP 391
Query: 692 LILQLCHAKKDEQVVKKAE 710
L + L K++ + +A+
Sbjct: 392 LYVALAQRKEERRARLQAQ 410
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL +++D+L++ FS+ G IT K+MR +G SR F+ F T +EA +A+ N
Sbjct: 324 LYVKNLDDSISDDKLKELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASKALTEMN 383
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 384 GKMVVSKPLYVALAQR 399
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + TED L+ F + G IT +MR DGKS+ F F+ F +A +++ N
Sbjct: 221 VYVKNLSETTTEDDLKKIFGEFGIITSTAVMRDADGKSKCFGFVNFDDPDDAARSVEALN 280
Query: 63 KSYLD 67
D
Sbjct: 281 GKKFD 285
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
E L+V+NL + ++D+L+E FS+FG ++ ++ D + S+G +V ++ E AS+
Sbjct: 319 FEGLNLYVKNLDDSISDDKLKELFSEFGTITSCKVMRDPNGI-SRGSGFVAFSTAEEASK 377
Query: 356 AIEVLDNSIFQGRLLHVMPARHKK 379
A+ ++ + + L+V A+ K+
Sbjct: 378 ALTEMNGKMVVSKPLYVALAQRKE 401
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL K + L D FS G I K+ G+SR + F+ F E+ A+ AI N
Sbjct: 130 IFIKNLDKSIDNKALHDTFSTFGNILSCKVATDSLGQSRGYGFVQFDNEESAKSAIDKLN 189
Query: 63 KSYLD 67
L+
Sbjct: 190 GMLLN 194
>gi|414879264|tpg|DAA56395.1| TPA: hypothetical protein ZEAMMB73_905144 [Zea mays]
Length = 792
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 42/44 (95%)
Query: 427 VVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALT 470
VVENIARK+G++KS+LLDREA+DLAVRIALGET VIAETKK L+
Sbjct: 554 VVENIARKNGINKSELLDREADDLAVRIALGETHVIAETKKFLS 597
>gi|268581545|ref|XP_002645756.1| C. briggsae CBR-PAB-2 protein [Caenorhabditis briggsae]
Length = 685
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 180/439 (41%), Gaps = 73/439 (16%)
Query: 282 GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
G P ++ L++ +L TE L E FS G V + + D ++ S G
Sbjct: 35 GPPPANMGYPPNATYSMASLYIGDLHGDVTESMLFEKFSMAGPVLSIRVCRDNTSRLSLG 94
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHKKSSDK-------QELHNS 389
AYV + P A RA++ ++ GR + +M PA + + + + N
Sbjct: 95 YAYVNFQQPADAERALDTMNFETIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNK 154
Query: 390 TSQGTKTLKQRREEERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREAN 448
+ T +L + A++ G+++ + + F ++ I + +G+ S
Sbjct: 155 SIYDTFSLFGNILSCKVAADEDGSSRGYGFVHFETEESAQIAIEKVNGMLLS-------- 206
Query: 449 DLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSE 508
++ +G+ Q A+ K L + GLK +N VF VKN +
Sbjct: 207 --GKKVYVGKFQTRAQRLKELGES----------------GLKYTN-VF-VKNFGEHLDQ 246
Query: 509 GELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLE 563
+L KMF K+G + ++ + K V + +P A A L K +G L L
Sbjct: 247 EKLTKMFSKYGEITSAVVMTDADGKPKGFGFVAYADPDAAQKAVDDLNEKTLEGTDLKL- 305
Query: 564 WAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNL 623
S + +K++ + A L+++ E + + R + +L+VKN+
Sbjct: 306 ----------SVCRAQKKSE--------RTADLKRKYEALKQERV--QRYQGVNLYVKNI 345
Query: 624 NFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQ 683
+ + DE LR HF G I S KV +NG+ S GFGF+ F+ E AT ++
Sbjct: 346 DEELTDEGLRAHFASF---GTITSAKVMVD-ENGR--SKGFGFVCFEKPEEATAAVTEMN 399
Query: 684 GTILDGHALILQLCHAKKD 702
++ L + L K+D
Sbjct: 400 SKMMGSKPLYVALAQRKED 418
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V+N+ T++ LR HF+ FG ++ ++VD++ RSKG +V + PE A+ A+ +
Sbjct: 340 LYVKNIDEELTDEGLRAHFASFGTITSAKVMVDENG-RSKGFGFVCFEKPEEATAAVTEM 398
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLK 398
++ + + L+V A +K + +L + Q TL+
Sbjct: 399 NSKMMGSKPLYVALA-QRKEDRRAQLASQYMQKLATLR 435
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN +++ +++L FS+ GEIT A +M DGK + F F+ + A++A+
Sbjct: 233 TNVFVKNFGEHLDQEKLTKMFSKYGEITSAVVMTDADGKPKGFGFVAYADPDAAQKAVDD 292
Query: 61 FNKSYLDTCRISCEIAR 77
N+ L+ + + R
Sbjct: 293 LNEKTLEGTDLKLSVCR 309
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKN+ + +T++ LR F+ G IT AK+M ++G+S+ F F+ F +EA A+ N
Sbjct: 340 LYVKNIDEELTDEGLRAHFASFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTEMN 399
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 400 SKMMGSKPLYVALAQR 415
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + + + D FS G I K+ +DG SR + F+ F TE+ A+ AI+ N
Sbjct: 142 IFIKNLDRVIDNKSIYDTFSLFGNILSCKVAADEDGSSRGYGFVHFETEESAQIAIEKVN 201
Query: 63 KSYLDTCRI 71
L ++
Sbjct: 202 GMLLSGKKV 210
>gi|384493509|gb|EIE84000.1| hypothetical protein RO3G_08705 [Rhizopus delemar RA 99-880]
Length = 624
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 177/425 (41%), Gaps = 83/425 (19%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L + TE L E F+ G V+ + + D T+RS G AYV + RA+
Sbjct: 43 SASLYVGELDPSVTEAMLFEMFNMIGPVASIRVCRDAVTRRSLGYAYVNFHNIVDGERAL 102
Query: 358 EVLDNSIFQGRLLHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQR 400
E L+ ++ +G+ +M P+ K S D + LH++ S L +
Sbjct: 103 ESLNYTLIKGKPCRIMWSQRDPSLRKTGSGNVFIKNLDPSIDNKALHDTFSAFGNILSCK 162
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
A + SGN+K + + + +N A KH V+ L D+ ++ +G
Sbjct: 163 -----IALDESGNSKGYGFVHYETEEAADN-AIKH-VNGMLLNDK-------KVYVGR-H 207
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
V + ++A +E+F A T+ VKNL + E +M KFG
Sbjct: 208 VPKKERQA---------KIEQFRAKFTN--------VYVKNLDESVKDEEFNEMLAKFGP 250
Query: 521 LDKVILPS-----TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
+ ++ + +K V F +A A L +KG LY+ A Q T
Sbjct: 251 ITSALVQTDDEGKSKGFGFVNFENHEDAQKAVDALNETEHKGKILYVARA------QKKT 304
Query: 576 SKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKH 635
+ E + ++ + +LE + + + +L++KNL+ DE LR+
Sbjct: 305 ER----------EEELRKQYEQAKLEKLA-------KYQGVNLYIKNLDDDIDDEKLRQE 347
Query: 636 FGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
F + G I S KV + + K+ S GFGF+ F S + AT ++ G ++ + +
Sbjct: 348 FSVY---GVITSAKV---MCDEKDTSKGFGFVCFSSPDEATKAVTEMNGRMIGSKPIYVA 401
Query: 696 LCHAK 700
L K
Sbjct: 402 LAQRK 406
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + L D FS G I K+ + G S+ + F+ + TE+ A+ AIK+ N
Sbjct: 134 VFIKNLDPSIDNKALHDTFSAFGNILSCKIALDESGNSKGYGFVHYETEEAADNAIKHVN 193
Query: 63 KSYLD 67
L+
Sbjct: 194 GMLLN 198
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + +++LR FS G IT AK+M + S+ F F+ F + EA +A+ N
Sbjct: 330 LYIKNLDDDIDDEKLRQEFSVYGVITSAKVMCDEKDTSKGFGFVCFSSPDEATKAVTEMN 389
Query: 63 KSYLDTCRISCEIARK 78
+ + I +A++
Sbjct: 390 GRMIGSKPIYVALAQR 405
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + V ++ + ++ G IT A + +GKS+ F F+ F ++A++A+
Sbjct: 225 TNVYVKNLDESVKDEEFNEMLAKFGPITSALVQTDDEGKSKGFGFVNFENHEDAQKAVDA 284
Query: 61 FNKS 64
N++
Sbjct: 285 LNET 288
>gi|403213408|emb|CCK67910.1| hypothetical protein KNAG_0A02210 [Kazachstania naganishii CBS
8797]
Length = 682
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 181/406 (44%), Gaps = 62/406 (15%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ V+ +P VT+++L +FF+ A +++ + KSR F F+ F +E++ +EA+
Sbjct: 19 LFVRAIPFAVTDEQLTEFFANFAPTKHAVVVKDVNKKSRGFGFVSFASEEDTKEALLKAR 78
Query: 63 KSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEKVT 122
K L+ + +IA++ +E+ +++ + +AA + E K
Sbjct: 79 KEKLNGQLLRVDIAKR----------------RERNKRKEDASNGIAAPKPEHKEKRTYG 122
Query: 123 ENDD-----PQLLEFLQVMQPRVKSKMWA---NDTLIGLMADQKAKVSENISQAIKG--- 171
+ DD P+L+ +++ W+ +TL + V +I + G
Sbjct: 123 DEDDQFKGKPKLI---------IRNMPWSCRDPNTLKNIFGRFGTVVDAHIPRKRDGKLC 173
Query: 172 GEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAG 231
G +T++ S+ N A E +K+ D +D+ + K W D + D+
Sbjct: 174 GFAFVTMNKISNCKN------ALENTKDLKIDGRQVAVDF--AVQKNRWEDYK---DAKT 222
Query: 232 DDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDV 291
++ +DD+ E EE S E +DS S ED + E + + S D
Sbjct: 223 ENKEDDNEEAEETLSKKKRSQSEESTSDSDEDSEDSEEDSEDEDEEAEEKKWEAKKSADG 282
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYA--- 348
+ + E +F+RN+PY AT + L EHF+KFG V V DK+T +KG A+V +
Sbjct: 283 PKNMREDYSIFIRNVPYEATSESLAEHFAKFGPVKYALPVFDKETGLAKGTAFVAFKDET 342
Query: 349 --------IPESASRAI----EVLDNSIFQGRLLHVMPARHKKSSD 382
P + + ++ +V+ +++GR+L V P ++ ++
Sbjct: 343 AYKFCVDHAPAAGTTSLLIDDDVMPEYVYEGRVLSVTPTLQREEAN 388
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 16/197 (8%)
Query: 285 SSSSKDV-QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT-KRSKGI 342
S S+KD Q+ L+ LFVR +P+ T+++L E F+ F H VV KD K+S+G
Sbjct: 2 SESTKDAFSQDGLDLQTLFVRAIPFAVTDEQLTEFFANFAPTK--HAVVVKDVNKKSRGF 59
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRRE 402
+V +A E A+ G+LL V A+ ++ + ++E S G K +
Sbjct: 60 GFVSFASEEDTKEALLKARKEKLNGQLLRVDIAKRRERNKRKE---DASNGIAAPKPEHK 116
Query: 403 EERKASEASGNTKAWNSLFMR--------PDTVVENIARKHGVSKSDLLDREANDLAVRI 454
E+R + K L +R P+T ++NI + G + R+ +
Sbjct: 117 EKRTYGDEDDQFKGKPKLIIRNMPWSCRDPNT-LKNIFGRFGTVVDAHIPRKRDGKLCGF 175
Query: 455 ALGETQVIAETKKALTN 471
A I+ K AL N
Sbjct: 176 AFVTMNKISNCKNALEN 192
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 187/433 (43%), Gaps = 87/433 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L T+ +L + F++ G V V + D ++RS G YV ++ P+ A+RA++VL
Sbjct: 33 LYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAARALDVL 92
Query: 361 DNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ + R + +M P+ K ++ D + LH++ S L
Sbjct: 93 NFTPLNNRPIRIMYSHRDPSIRKSGQGNIFIKNLDRAIDHKALHDTFSTFGNILSC---- 148
Query: 404 ERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI 462
+ A+++SG +K + + F ++ + I + +G+ LL ND V +
Sbjct: 149 -KVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGM----LL----NDKQVYV-------- 191
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
G + E SA + N+VF VKNL +++ EL FG+FG++
Sbjct: 192 ----------GPFLRKQERESAADK---AKFNNVF-VKNLSESTTDDELKNTFGEFGTIT 237
Query: 523 KVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
++ +K V F +AA A + L K + EW K
Sbjct: 238 SAVVMRDGDGKSKCFGFVNFENADDAARAVEALNGKNFDDK----EW---------YVGK 284
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
+K++ E++ K+ + E D+ + +L+VKNL+ DE L++ F
Sbjct: 285 AQKKSER---ENELKQRFEQSMKEAA-------DKYQGANLYVKNLDDSIGDEKLKELFS 334
Query: 638 EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
G I S KV +++ +S G GF+ F + E A+ ++ G ++ L + L
Sbjct: 335 PF---GTITSCKV---MRDPNGLSRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVTLA 388
Query: 698 HAKKDEQVVKKAE 710
K+D + +A+
Sbjct: 389 QRKEDRRARLQAQ 401
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + T+D L++ F + G IT A +MR DGKS+ F F+ F +A A++ N
Sbjct: 212 VFVKNLSESTTDDELKNTFGEFGTITSAVVMRDGDGKSKCFGFVNFENADDAARAVEALN 271
Query: 63 KSYLD 67
D
Sbjct: 272 GKNFD 276
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + +++L++ FS G IT K+MR +G SR F+ F T +EA A+
Sbjct: 313 ANLYVKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGLSRGSGFVAFSTPEEASRALLE 372
Query: 61 FNKSYLDTCRISCEIARK 78
N + + + +A++
Sbjct: 373 MNGKMVVSKPLYVTLAQR 390
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ L+V+NL + +++L+E FS FG ++ ++ D + S+G +V ++ PE ASRA
Sbjct: 311 QGANLYVKNLDDSIGDEKLKELFSPFGTITSCKVMRDPN-GLSRGSGFVAFSTPEEASRA 369
Query: 357 IEVLDNSIFQGRLLHVMPARHKK 379
+ ++ + + L+V A+ K+
Sbjct: 370 LLEMNGKMVVSKPLYVTLAQRKE 392
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G +F++NL L + FS FGN+ + D + +SKG +V + ESA +AIE
Sbjct: 119 GNIFIKNLDRAIDHKALHDTFSTFGNILSCKVATDS-SGQSKGYGFVQFDNEESAQKAIE 177
Query: 359 VLDNSIFQGRLLHVMPARHKK----SSDKQELHN 388
L+ + + ++V P K+ ++DK + +N
Sbjct: 178 KLNGMLLNDKQVYVGPFLRKQERESAADKAKFNN 211
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + + L D FS G I K+ G+S+ + F+ F E+ A++AI+ N
Sbjct: 121 IFIKNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLN 180
Query: 63 KSYLD 67
L+
Sbjct: 181 GMLLN 185
>gi|403216743|emb|CCK71239.1| hypothetical protein KNAG_0G01810 [Kazachstania naganishii CBS
8797]
Length = 596
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 185/451 (41%), Gaps = 77/451 (17%)
Query: 269 VGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEV 328
+ EE E SS S+ + S L+V L + +E L + FS G+V+ +
Sbjct: 17 ISEEQPQQEATPASTASSESQQAGDNDVTSTSLYVGELDPSVSEALLYDLFSPIGSVASI 76
Query: 329 HIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHKKSSD- 382
+ D TK S G AYV ++ E+ +AIE L+ + +G+L +M P+ KK
Sbjct: 77 RVCRDAITKTSLGYAYVNFSDHEAGKQAIEKLNYTPIKGKLCRIMWSQRDPSLRKKGHGN 136
Query: 383 ------KQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVV-ENIARKH 435
Q++ N T ++ + A++ +G +K + + ++ E I +
Sbjct: 137 IFIKNLNQDIDNKALFDTFSVFGNILSSKIATDETGKSKGFGFVHFEEESAANEAIDALN 196
Query: 436 GVSKSDLLDREANDLAVRIALGET-QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSN 494
G+ LL+ + +A + E + ETK TN
Sbjct: 197 GM----LLNGQEIYVAPHLTRKERDSQLEETKAHFTNV---------------------- 230
Query: 495 HVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKG 549
VKN+ ++++ E + FGK G++ V L K V + + +A A +
Sbjct: 231 ---YVKNIDLETTDEEFKEFFGKIGTVTSVALERGPDGKLKGFGFVNYEDHNDAVKAVEE 287
Query: 550 LAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADID 609
L +K L++ A K ++ ++ ++++ R + +GV
Sbjct: 288 LNGAEFKDQELFVGRA----------QKKYERIQSLKKQYESTRLEKMAKYQGV------ 331
Query: 610 PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEF 669
+LFVKNL+ DE L++ F G I SVKV + +NGK S GFGF+ F
Sbjct: 332 -------NLFVKNLDDSIDDEKLQEEFAPF---GNITSVKVMR-TENGK--SKGFGFVCF 378
Query: 670 DSVETATNVCRDLQGTILDGHALILQLCHAK 700
S E AT + I+ G L + + K
Sbjct: 379 SSPEEATKAITEKNQQIVAGKPLYVAIAQRK 409
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + +++L++ F+ G IT K+MRT++GKS+ F F+ F + +EA +AI N
Sbjct: 333 LFVKNLDDSIDDEKLQEEFAPFGNITSVKVMRTENGKSKGFGFVCFSSPEEATKAITEKN 392
Query: 63 KSYLDTCRISCEIARK 78
+ + + IA++
Sbjct: 393 QQIVAGKPLYVAIAQR 408
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + + L D FS G I +K+ + GKS+ F F+ F E A EAI N
Sbjct: 137 IFIKNLNQDIDNKALFDTFSVFGNILSSKIATDETGKSKGFGFVHFEEESAANEAIDALN 196
Query: 63 KSYLDTCRI 71
L+ I
Sbjct: 197 GMLLNGQEI 205
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN+ T++ ++FF + G +T L R DGK + F F+ + +A +A++
Sbjct: 228 TNVYVKNIDLETTDEEFKEFFGKIGTVTSVALERGPDGKLKGFGFVNYEDHNDAVKAVEE 287
Query: 61 FN 62
N
Sbjct: 288 LN 289
>gi|312091342|ref|XP_003146944.1| hypothetical protein LOAG_11375 [Loa loa]
Length = 183
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 605 DADIDPDRV-ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKH---LKNGKNV 660
DA+ + DR+ +LFVKNL+FKT DE L+ F RI S V K + K +
Sbjct: 65 DAEEEDDRLLPGTTLFVKNLSFKTTDEGLKNKFESRF---RIRSATVSKKRDAVDPTKAL 121
Query: 661 SMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
SMGFGFI F E A +++QG +LDGH L+L+L H
Sbjct: 122 SMGFGFITFYQPEDAQQAIKEMQGVLLDGHCLMLKLSH 159
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 287 SSKDVQQE---VLESGRLFVRNLPYTATEDELREHF-SKF----GNVSEVHIVVDKDTKR 338
S+ D ++E +L LFV+NL + T++ L+ F S+F VS+ VD
Sbjct: 62 SNDDAEEEDDRLLPGTTLFVKNLSFKTTDEGLKNKFESRFRIRSATVSKKRDAVDPTKAL 121
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK 383
S G ++ + PE A +AI+ + + G L + + + DK
Sbjct: 122 SMGFGFITFYQPEDAQQAIKEMQGVLLDGHCLMLKLSHREVVPDK 166
>gi|389748929|gb|EIM90106.1| polyadenylate binding protein [Stereum hirsutum FP-91666 SS1]
Length = 682
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 167/415 (40%), Gaps = 63/415 (15%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V L T TE L E F+ G V+ + + D T+RS G AYV Y RA+E L
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNVTDGERALEQL 105
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLK--------QRREEERKASEASG 412
+ S+ +GR +M S + T QG +K + R ++ A
Sbjct: 106 NYSLIKGRACRIM------WSQRDPALRKTGQGNIFIKNLDELIDNKVRTAQKTPPHALH 159
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNA 472
+T A + + R G EA + A++ G ++ KK
Sbjct: 160 DTFAAFGNVLSCKVATDEQGRSRGYGYVHYETAEAAESAIKAVNG---MLLNDKKVYVGY 216
Query: 473 GVN----VSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS 528
++ S LEE A T+ VKNL + ++ + ++F +FG++ ++ +
Sbjct: 217 HISRKERQSKLEEMRAHFTN--------LYVKNLDLEVTQDQFVELFSQFGAVTSAVIQT 268
Query: 529 -----TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKND 583
+K V F +AA A L + G L++ S+ +K +
Sbjct: 269 DEEGKSKGFGFVNFENHEQAAKAVDTLHDTDFNGKKLFV-------------SRAQKKAE 315
Query: 584 AVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEG 643
E + +++ ++E ++ + + +L++KNL DE LR F G
Sbjct: 316 R---EEELRKSYESAKMEKLS-------KYQGVNLYIKNLEDDVDDEKLRAEFEPF---G 362
Query: 644 RILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
I S KV +++ K S GFGF+ F S + AT ++ ++ L + L
Sbjct: 363 TITSCKV---MRDDKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLAQ 414
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ + VKNL VT+D+ + FSQ G +T A + ++GKS+ F F+ F ++A +A+
Sbjct: 235 TNLYVKNLDLEVTQDQFVELFSQFGAVTSAVIQTDEEGKSKGFGFVNFENHEQAAKAV 292
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL V +++LR F G IT K+MR G S+ F F+ F + EA +A+ N
Sbjct: 340 LYIKNLEDDVDDEKLRAEFEPFGTITSCKVMRDDKGTSKGFGFVCFSSPDEATKAVAEMN 399
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 400 NKMIGSKPLYVSLAQR 415
>gi|326511132|dbj|BAJ87580.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E GR++V NLPYT T EL FS+ G+V +V I+ DK T RS+G A+V A E A++A
Sbjct: 106 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKA 165
Query: 357 IEVLDNSIFQGRLLHV 372
+++ + ++ GR + V
Sbjct: 166 VQMFNGALLGGRTVRV 181
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKY 60
RI V NLP T L FS+ G + D +++ K +SR FAF+ T +EA +A++
Sbjct: 109 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKAVQM 168
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPR 86
FN + L + +V P +PR
Sbjct: 169 FNGALLGGRTV------RVNFPEVPR 188
>gi|357111564|ref|XP_003557582.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 354
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E GR++V NLPYT T EL FS+ G+V +V I+ DK T RS+G A+V A E A++A
Sbjct: 119 EPGRIYVGNLPYTFTAAELTSVFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKA 178
Query: 357 IEVLDNSIFQGRLLHV 372
+++ + ++ GR + V
Sbjct: 179 VQMFNGALLGGRTIRV 194
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKY 60
RI V NLP T L FS+ G + D +++ K +SR FAF+ T +EA +A++
Sbjct: 122 RIYVGNLPYTFTAAELTSVFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKAVQM 181
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPR 86
FN + L I +V P +PR
Sbjct: 182 FNGALLGGRTI------RVNFPEVPR 201
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+++ NL + D L+ F + ++ ++DT RS+G +V + E A+ AI+
Sbjct: 226 KVYAGNLGWGVRADALKTAFEGQPGLLGSRVIFERDTGRSRGFGFVSFQTLEDANAAIQA 285
Query: 360 LDNSIFQGRLLH----------------VMPARHKKSSDKQELHNSTSQGTKTLKQRREE 403
+D GR L V+P + + +S+ E TS G++ + EE
Sbjct: 286 MDGVELDGRPLRLSLASQNPPAGSTPSTVLPKQEETASNGSEAEVETSNGSEQFEAETEE 345
Query: 404 ERKASEAS 411
+ AS
Sbjct: 346 SNLQTTAS 353
>gi|3550485|emb|CAA11894.1| cp33Hv [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E GR++V NLPYT T EL FS+ G+V +V I+ DK T RS+G A+V A E A++A
Sbjct: 106 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKA 165
Query: 357 IEVLDNSIFQGRLLHV 372
+++ + ++ GR + V
Sbjct: 166 VQMFNGALLGGRTVRV 181
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKY 60
RI V NLP T L FS+ G + D +++ K +SR FAF+ T +EA +A++
Sbjct: 109 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKAVQM 168
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPR 86
FN + L + +V P +PR
Sbjct: 169 FNGALLGGRTV------RVNFPEVPR 188
>gi|336364894|gb|EGN93247.1| hypothetical protein SERLA73DRAFT_172163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 684
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 169/403 (41%), Gaps = 49/403 (12%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V L T TE L E F+ G V+ + + D T+RS G AYV Y RA+E L
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTSDGERALEQL 105
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ S+ + R +M S + T QG +K +E+ ++A +T A
Sbjct: 106 NYSLIKNRACRIM------WSQRDPALRKTGQGNIFIKNL--DEQIDNKALHDTFAAFGN 157
Query: 421 FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLE 480
+ + R G EA + A++ G ++ KK G ++S E
Sbjct: 158 VLSCKVATDEHGRSKGYGFVHYETGEAAETAIKAVNG---MLLNDKKVYV--GYHISRKE 212
Query: 481 EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALV 535
S K D +K +KNL ++ E +MF K+G++ I+ ++K V
Sbjct: 213 RQS--KLDEMKAQFTNLYIKNLDTSVTQDEFEEMFQKYGNVTSAIVQVDEEGNSKGFGFV 270
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRAL 595
+ EA +A L +G L++ S+ +K + E + +R+
Sbjct: 271 NYEHHEEAQSAVDALHDTDIRGKKLFV-------------SRAQKKAER---EEELRRSY 314
Query: 596 LEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLK 655
+ ++E ++ + + +L++KNL DE LR F G I S KV ++
Sbjct: 315 EQAKMEKLS-------KYQGVNLYIKNLEDDVDDEKLRAEFEPF---GTITSCKV---MR 361
Query: 656 NGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
+ K+ S GFGF+ F S + AT ++ ++ L + L
Sbjct: 362 DDKSTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLAQ 404
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL V +++LR F G IT K+MR S+ F F+ F + EA +A+ N
Sbjct: 330 LYIKNLEDDVDDEKLRAEFEPFGTITSCKVMRDDKSTSKGFGFVCFSSPDEATKAVAEMN 389
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 390 NKMIGSKPLYVSLAQR 405
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ + +KNL VT+D + F + G +T A + ++G S+ F F+ + +EA+ A+
Sbjct: 225 TNLYIKNLDTSVTQDEFEEMFQKYGNVTSAIVQVDEEGNSKGFGFVNYEHHEEAQSAV 282
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + + L D F+ G + K+ + G+S+ + F+ + T + AE AIK N
Sbjct: 134 IFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGYGFVHYETGEAAETAIKAVN 193
Query: 63 KSYLD--TCRISCEIARK 78
L+ + I+RK
Sbjct: 194 GMLLNDKKVYVGYHISRK 211
>gi|302415969|ref|XP_003005816.1| multiple RNA-binding domain-containing protein [Verticillium
albo-atrum VaMs.102]
gi|261355232|gb|EEY17660.1| multiple RNA-binding domain-containing protein [Verticillium
albo-atrum VaMs.102]
Length = 157
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKG-EITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
SRI VK +P +++ + FS G E+TD K++ R+ ++GF+T ++A++A++
Sbjct: 13 SRIFVKGIPPTISDADFKKHFSAGGREVTDVKVI-----LPRRIGYVGFKTSEDAKKAVR 67
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPW 88
YFNKSY+ RI ++AR + DP + R W
Sbjct: 68 YFNKSYIRMSRIEVQLARPIADPALKRNW 96
>gi|351721799|ref|NP_001235686.1| uncharacterized protein LOC100305971 [Glycine max]
gi|255627149|gb|ACU13919.1| unknown [Glycine max]
Length = 150
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 59/98 (60%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
V+P + + ++ + + ++ V+NLPY+ E L++ FS FG ++EV +V D +TKR
Sbjct: 21 VNPSLLTLRASSLRHDYPLASKIVVKNLPYSTGETTLQKEFSNFGKIAEVKMVKDMNTKR 80
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
SKGIA++ Y + A A+E +D F GR + V AR
Sbjct: 81 SKGIAFIQYTCQDDAMLALETMDQKDFYGRTIGVEIAR 118
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIK 59
S+I VKNLP E L+ FS G+I + K+++ + K S+ AFI + + +A A++
Sbjct: 41 SKIVVKNLPYSTGETTLQKEFSNFGKIAEVKMVKDMNTKRSKGIAFIQYTCQDDAMLALE 100
Query: 60 YFNKSYLDTCRISCEIARKVGD-----PNMPRPWSRYSLKKEKEV 99
++ I EIAR D P P ++ L ++ EV
Sbjct: 101 TMDQKDFYGRTIGVEIARLGWDDFGASPRASGPPKKWDLPEQGEV 145
>gi|398327|emb|CAA81127.1| poly(A)-mRNA binding protein [Anemia phyllitidis]
Length = 638
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 186/433 (42%), Gaps = 88/433 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L +E EL E F++ G V + + D TK+S G AYV Y + AS+A+E+L
Sbjct: 28 LYVGDLDPDVSESELYEVFNQIGQVVSIRVCRDLMTKKSLGYAYVNYGTHQDASQALELL 87
Query: 361 DNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ ++ +G+ + +M P+ K KS D + LH++ S L
Sbjct: 88 NFTLVKGKPIRIMYSHRDPSIRKSGAANIFIKNLEKSIDNKALHDTFSAFGTILSC---- 143
Query: 404 ERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI 462
R + +GN+K + + F + ++ I + +G+ ND V +A I
Sbjct: 144 -RVVMDDAGNSKGYGFVQFEKEESAQIAIEKVNGML--------INDRQVSVA----PFI 190
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
+ ++ + ++ K N+V+ VKNL +++ +L K+F FG +
Sbjct: 191 RKQERDMASS------------------KNFNNVY-VKNLAEATTDEDLRKVFAGFGPIS 231
Query: 523 KVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
++ +K V F +AA A + L K Y+ A K
Sbjct: 232 SAVVMRDADGKSKCFGFVNFENVDDAANAVENLNGKLINEKEWYVGRA----------QK 281
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
+++ + + + R E++ +GV +L++KN++ DE LR+ F
Sbjct: 282 KSEREAELKAKFEQVRKEKEEKFQGV-------------NLYLKNIDDSIDDEKLRELFA 328
Query: 638 EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
G + S KV +K+ + SMG GF+ F + E A D+ G ++ L + L
Sbjct: 329 VF---GTVTSCKV---MKSPQGQSMGSGFVTFSAPEEAMQAVNDMNGKMVGSKPLYVALA 382
Query: 698 HAKKDEQVVKKAE 710
K++ + +A+
Sbjct: 383 QRKEERRARLQAQ 395
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + T++ LR F+ G I+ A +MR DGKS+ F F+ F +A A++ N
Sbjct: 206 VYVKNLAEATTDEDLRKVFAGFGPISSAVVMRDADGKSKCFGFVNFENVDDAANAVENLN 265
Query: 63 KSYLD 67
++
Sbjct: 266 GKLIN 270
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ +F++NL + L + FS FG + +V+D D SKG +V + ESA AI
Sbjct: 113 AANIFIKNLEKSIDNKALHDTFSAFGTILSCRVVMD-DAGNSKGYGFVQFEKEESAQIAI 171
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
E ++ + R + V P K+ D N + K L + +E +G
Sbjct: 172 EKVNGMLINDRQVSVAPFIRKQERDMASSKNFNNVYVKNLAEATTDEDLRKVFAGFGPIS 231
Query: 418 NSLFMR 423
+++ MR
Sbjct: 232 SAVVMR 237
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KN+ + +++LR+ F+ G +T K+M++ G+S F+ F +EA +A+ N
Sbjct: 309 LYLKNIDDSIDDEKLRELFAVFGTVTSCKVMKSPQGQSMGSGFVTFSAPEEAMQAVNDMN 368
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 369 GKMVGSKPLYVALAQR 384
>gi|357490875|ref|XP_003615725.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
truncatula]
gi|355517060|gb|AES98683.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
truncatula]
Length = 149
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 287 SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
SS ++ E + ++ V+NLPY E+ L++ FS FG ++EV +V D T+RSKG+A++
Sbjct: 27 SSLSMRHEYPLASKILVKNLPYFTGENALQKKFSNFGKIAEVQMVKDVSTERSKGLAFIQ 86
Query: 347 YAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERK 406
Y + A A+E +D F GR + V +K ++HN
Sbjct: 87 YTCQDDAMLALETMDQQSFYGRTISV-------ELEKLDVHNFVG--------------- 124
Query: 407 ASEASGNTKAWN 418
+ +ASG K WN
Sbjct: 125 SPKASGPPKKWN 136
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 187/432 (43%), Gaps = 85/432 (19%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + T+ +L ++F++ V V + D T S G YV Y+ E A +A++ L
Sbjct: 43 LYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTEDAEKAMQKL 102
Query: 361 DNSIFQGRLLHVMPARHK-----------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ S G+++ + + KS D + LH + S G T+
Sbjct: 103 NYSTLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHETFS-GCGTIV----S 157
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIA 463
+ A++ G ++ + F++ DT E+ A K+ + K L + ND + +
Sbjct: 158 CKVAADHMGQSRGYG--FVQFDT--EDSA-KNAIEK--LNGKVLNDKQIFV--------- 201
Query: 464 ETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDK 523
G + E SA D +K +N VKNL +++ EL FG++GS+
Sbjct: 202 ---------GPFLRKEERESA--ADKMKFTN--VYVKNLSEVTTDDELKTTFGQYGSISS 248
Query: 524 VIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKG 578
++ ++ V F P +AA A + L K++ EW K
Sbjct: 249 AVVMRDGDGKSRCFGFVNFENPEDAARAVEALNGKKFDDK----EW---------YVGKA 295
Query: 579 NQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE 638
+K+ + + L + +G +DA ++ + +L+VKNL+ DE LR+ F E
Sbjct: 296 QKKS-------ERELELSRRYEQGSSDAG---NKFDGLNLYVKNLDDTVTDEKLRELFAE 345
Query: 639 HIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
G I S KV +++ S G GF+ F + A+ V ++ G ++ G L + L
Sbjct: 346 F---GTITSCKV---MRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQ 399
Query: 699 AKKDEQVVKKAE 710
K++ + +A+
Sbjct: 400 RKEERRAKLQAQ 411
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + T+D L+ F Q G I+ A +MR DGKSR F F+ F ++A A++
Sbjct: 220 TNVYVKNLSEVTTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEA 279
Query: 61 FNKSYLD 67
N D
Sbjct: 280 LNGKKFD 286
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL VT+++LR+ F++ G IT K+MR G S+ F+ F EA + N
Sbjct: 325 LYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMN 384
Query: 63 KSYLDTCRISCEIARK 78
+ + +A++
Sbjct: 385 GKMVGGKPLYVALAQR 400
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL K V L + FS G I K+ G+SR + F+ F TE A+ AI+ N
Sbjct: 131 LFVKNLDKSVDNKTLHETFSGCGTIVSCKVAADHMGQSRGYGFVQFDTEDSAKNAIEKLN 190
Query: 63 KSYLDTCRI 71
L+ +I
Sbjct: 191 GKVLNDKQI 199
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G LFV+NL + L E FS G + + D +S+G +V + +SA AIE
Sbjct: 129 GNLFVKNLDKSVDNKTLHETFSGCGTIVSCKVAADH-MGQSRGYGFVQFDTEDSAKNAIE 187
Query: 359 VLDNSIFQGRLLHVMPARHKK----SSDKQELHN 388
L+ + + + V P K+ ++DK + N
Sbjct: 188 KLNGKVLNDKQIFVGPFLRKEERESAADKMKFTN 221
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 16/108 (14%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK-HLKNGKNVSMGFGFIEFDSVETA 675
+LFVKNL+ ++ L + F G I+S KV H+ S G+GF++FD+ ++A
Sbjct: 130 NLFVKNLDKSVDNKTLHETFSGC---GTIVSCKVAADHMGQ----SRGYGFVQFDTEDSA 182
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
N L G +L+ + + ++K E++ ++ K+ NV
Sbjct: 183 KNAIEKLNGKVLNDKQIFV--------GPFLRKEERESAADKMKFTNV 222
>gi|452821825|gb|EME28851.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 149
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E R+FV LP++ ED+LRE FSK+G V + +VV+++T RS+G +V YA S
Sbjct: 4 VEDNRVFVGGLPWSVGEDDLRETFSKYGEVVDARVVVERETGRSRGFGFVSYAEGSSVEE 63
Query: 356 AIEVLDNSIFQGRLLHVMPARHKK 379
I LD QGR + V A ++
Sbjct: 64 CIAALDGQDMQGRTIRVNKAMSRE 87
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAI 58
+R+ V LP V ED LR+ FS+ GE+ DA+++ ++ G+SR F F+ + EE I
Sbjct: 7 NRVFVGGLPWSVGEDDLRETFSKYGEVVDARVVVERETGRSRGFGFVSYAEGSSVEECI 65
>gi|356514396|ref|XP_003525892.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 630
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 192/447 (42%), Gaps = 87/447 (19%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + + +L + F++ V V I D T++S G YV ++ A++AI+VL
Sbjct: 26 LYVGDLDHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGYVNFSNARDAAKAIDVL 85
Query: 361 DNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ + G+ + +M P+ K K+ D + L ++ S L +
Sbjct: 86 NFTPLNGKTIRIMYSIRDPSARKSGAANVFIKNLDKAIDHKALFDTFSAFGNILSCK--- 142
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVEN-IARKHGVSKSDLLDREANDLAVRIALGETQVI 462
A++ASG +K + + +N I + +G+ +D ++ +G Q
Sbjct: 143 --IATDASGQSKGHGFVQFESEESAQNAIDKLNGMLIND----------KQVYVGPFQRK 190
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
+ + AL+ + N+V+ VKNL ++E +L +FG++G++
Sbjct: 191 QDRESALSGT-------------------KFNNVY-VKNLFEATTEADLKSIFGEYGAIT 230
Query: 523 KVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
++ +K V F +AA A + L K + G EW K
Sbjct: 231 SAVVMRDVDGKSKGFGFVNFANVEDAAKAVEALNGKNFDGK----EW---------YVGK 277
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
+K++ + L+++ E T +D + +L++KNL+ DE LR+ F
Sbjct: 278 AQKKSE--------RELELKERNEQSTKETVD--KYHGTNLYIKNLDDSVGDEELRELFS 327
Query: 638 EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
E G I S KV +++ +S G GF+ F E A+ ++ G ++ G L + L
Sbjct: 328 EF---GTITSCKV---MRDPSGISRGSGFVAFSIAEGASWALGEMNGKMVAGKPLYVALA 381
Query: 698 HAKKDEQVVKKAEKDKSSTKLLVRNVA 724
K+D + +A+ ++ + NV+
Sbjct: 382 QRKEDRRARLQAQFSQARPVAITPNVS 408
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + TE L+ F + G IT A +MR DGKS+ F F+ F ++A +A++ N
Sbjct: 205 VYVKNLFEATTEADLKSIFGEYGAITSAVVMRDVDGKSKGFGFVNFANVEDAAKAVEALN 264
Query: 63 KSYLD 67
D
Sbjct: 265 GKNFD 269
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KNL V ++ LR+ FS+ G IT K+MR G SR F+ F + A A+
Sbjct: 306 TNLYIKNLDDSVGDEELRELFSEFGTITSCKVMRDPSGISRGSGFVAFSIAEGASWALGE 365
Query: 61 FNKSYLDTCRISCEIARK 78
N + + +A++
Sbjct: 366 MNGKMVAGKPLYVALAQR 383
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ +F++NL L + FS FGN+ I D + +SKG +V + ESA AI
Sbjct: 111 AANVFIKNLDKAIDHKALFDTFSAFGNILSCKIATDA-SGQSKGHGFVQFESEESAQNAI 169
Query: 358 EVLDNSIFQGRLLHVMPARHKK 379
+ L+ + + ++V P + K+
Sbjct: 170 DKLNGMLINDKQVYVGPFQRKQ 191
>gi|427783563|gb|JAA57233.1| Putative splicing factor sc35 [Rhipicephalus pulchellus]
Length = 214
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP+ T ++L + F K+G V++V ++ DK T +SKG+A+VL+ PESAS+ L
Sbjct: 12 VYVSNLPFKLTNNDLHQIFEKYGKVAKVTVMKDKQTWKSKGVAFVLFMDPESASKCASAL 71
Query: 361 DNSIFQGRLLHVMPARH 377
+N + GR L A++
Sbjct: 72 NNQLLMGRTLRASIAKY 88
>gi|225560420|gb|EEH08701.1| RNA recognition domain-containing protein-containing protein
[Ajellomyces capsulatus G186AR]
Length = 740
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 157/354 (44%), Gaps = 42/354 (11%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAK-LMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+ V++LP T + L ++FSQ + A ++ + +S+ + F+ F ++A +A++ F
Sbjct: 49 LFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADHEDAAKALEEF 108
Query: 62 NKSYLDTCRISCEIA----RKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKT 117
N S D ++ E+A R++ D N + S LK+ +E+ + + P R +
Sbjct: 109 NGSDFDGRKLKIEVAEPRHREI-DENGGKSVSISHLKQVREIRKTQAQPPKLIIRNLPWS 167
Query: 118 IEKVTENDD-PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSI 176
I E D L ++ V K + G + + K +E A+ G E
Sbjct: 168 I---AEPDQLSSLFRSFGKVKHAVIPKRGTKHSGFGFVVLRGRKNAEKALNAVNGKE--- 221
Query: 177 TLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDD 236
D + D A EKS DE + D D D + ++ D+D+
Sbjct: 222 -----VDGRTLAVD-WAVEKS---VWDEFQNHTD--------DVIDGKGKEKEGPDNDNK 264
Query: 237 DDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVL 296
+ E+E+E+ + + N + + + D G+ D G K + +EV
Sbjct: 265 LN---EKEDESSTDDELNGRLEDDEGEEDEDDISMTDLEGDEEDAG------KKIDEEVE 315
Query: 297 E---SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
+ + +F+RNLP+ AT+D L EHF +FG + +VVD +T R +G A+V +
Sbjct: 316 DERNASTVFIRNLPFNATDDSLYEHFVQFGPLRYARVVVDAETDRPRGTAFVCF 369
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 297 ESGR-LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+SGR LFVR+LP +AT + L E+FS+ + +V+D TK+SKG +V +A E A++
Sbjct: 44 KSGRTLFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADHEDAAK 103
Query: 356 AIEVLDNSIFQGRLLHVMPA--RHK 378
A+E + S F GR L + A RH+
Sbjct: 104 ALEEFNGSDFDGRKLKIEVAEPRHR 128
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 289 KDVQQEVLESGRLFVRNLPYTATE-DELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
+++++ + +L +RNLP++ E D+L F FG V H V+ K + G +V+
Sbjct: 147 REIRKTQAQPPKLIIRNLPWSIAEPDQLSSLFRSFGKVK--HAVIPKRGTKHSGFGFVVL 204
Query: 348 AIPESASRAIEVLDNSIFQGRLLHV 372
++A +A+ ++ GR L V
Sbjct: 205 RGRKNAEKALNAVNGKEVDGRTLAV 229
>gi|224063493|ref|XP_002301171.1| predicted protein [Populus trichocarpa]
gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 194/451 (43%), Gaps = 88/451 (19%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + T+ +L + F++ G V V + D T+RS G YV Y+ P+ A+RA++VL
Sbjct: 33 LYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVL 92
Query: 361 DNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ + + L +M P+ K K+ D + LH++ S L
Sbjct: 93 NFTPLNNKPLRIMYSHRDPSIRKSGMANIFIKNLDKTIDHKALHDTFSSFGNILSC---- 148
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVEN-IARKHGVSKSDLLDREANDLAVRIALGETQVI 462
+ A++ASG +K + + + +N I + +G+ +D ++ +G
Sbjct: 149 -KVATDASGQSKGYGFVQFDSEEAAQNAIDKLNGMLIND----------KQVYVGNFLRK 197
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
E AL+N + N+++ VKNL +++ +L +F + G++
Sbjct: 198 QERDSALSNI-------------------KFNNIY-VKNLAESTTDEDLKSIFEEHGAIT 237
Query: 523 KVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
++ +K V F +AA A + L K++ EW K
Sbjct: 238 SAVVMRDADGKSKCFGFVNFENVDDAAKAVEALNGKKFDDK----EW---------YVGK 284
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
+K++ E + K EQ LE V ++ ++ +L++KNL+ DE L++ F
Sbjct: 285 AQKKSER---ELELK-GRFEQSLESV-------EKYQAVNLYIKNLDDSVNDEKLKELFS 333
Query: 638 EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
+ G I S KV + + +S G GF+ F + E A+ +L G ++ L +
Sbjct: 334 DF---GTITSCKV---MHDPSGISRGSGFVAFSTPEEASRALAELNGKMVVSKPLYVAPA 387
Query: 698 HAKKDEQVVKKAEKDKSSTKLLVRNVAFEAQ 728
K++ + +A+ + + +VA Q
Sbjct: 388 QRKEERRARLQAQFSQMRPVAMAPSVAPRMQ 418
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I VKNL + T++ L+ F + G IT A +MR DGKS+ F F+ F +A +A++ N
Sbjct: 212 IYVKNLAESTTDEDLKSIFEEHGAITSAVVMRDADGKSKCFGFVNFENVDDAAKAVEALN 271
Query: 63 KSYLD 67
D
Sbjct: 272 GKKFD 276
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL V +++L++ FS G IT K+M G SR F+ F T +EA A+ N
Sbjct: 314 LYIKNLDDSVNDEKLKELFSDFGTITSCKVMHDPSGISRGSGFVAFSTPEEASRALAELN 373
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I +KNL K + L D FS G I K+ G+S+ + F+ F +E+ A+ AI
Sbjct: 119 ANIFIKNLDKTIDHKALHDTFSSFGNILSCKVATDASGQSKGYGFVQFDSEEAAQNAIDK 178
Query: 61 FN 62
N
Sbjct: 179 LN 180
>gi|148539604|ref|NP_001091917.1| polyA-binding protein [Strongylocentrotus purpuratus]
gi|126722149|emb|CAM57104.1| polyA-binding protein [Strongylocentrotus purpuratus]
Length = 640
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 175/414 (42%), Gaps = 47/414 (11%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L TE L E FS G + + + D T+RS G AYV + P A RA++ +
Sbjct: 13 LYVGDLHADVTEALLFEKFSTAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ +GR P R S L S G + + ++ ++A +T +
Sbjct: 73 NFDTLKGR-----PIRIMWSQRDPSLRKS---GVGNVFIKNLDKSIDNKAMYDTFSAFGH 124
Query: 421 FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLE 480
+ V + G +EA + A+ G ++ KK G + E
Sbjct: 125 ILSCKVVTDENGVNKGYGFVHFETQEAANKAIEKVNG---MLLNGKKVYV--GYFIPRKE 179
Query: 481 EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSL--DKVILPSTKTLAL-VVF 537
D K+ +VF +KNL D +G+LA+ G++GS+ K++ +K+ +
Sbjct: 180 RLMQ-MGDHQKQFTNVF-IKNLAEDVDDGKLAEFGGQYGSILSAKIMFDDSKSKGFGFIS 237
Query: 538 LEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLE 597
E EAA F K G S+V ++ + QK E A+ L+
Sbjct: 238 FEDHEAANDF----VKTING---------SEVNGRTLYAGRAQKKAERAAELKARFEALK 284
Query: 598 QQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNG 657
Q+ R + +L++KNL+ + DE LRK F + G I S KV + +
Sbjct: 285 QERS---------TRYQGVNLYIKNLDDEIDDERLRKEFSRY---GTITSAKV---MSDD 329
Query: 658 KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEK 711
K S GFGF+ F S E AT ++ G IL L + L +KDE+ + A +
Sbjct: 330 KANSKGFGFVCFSSPEEATKAVTEMNGRILVAKPLYVALAQ-RKDERRAQLASQ 382
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + ++RLR FS+ G IT AK+M S+ F F+ F + +EA +A+ N
Sbjct: 296 LYIKNLDDEIDDERLRKEFSRYGTITSAKVMSDDKANSKGFGFVCFSSPEEATKAVTEMN 355
Query: 63 KSYLDTCRISCEIARK 78
L + +A++
Sbjct: 356 GRILVAKPLYVALAQR 371
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
++F+KNL+ ++ + F G ILS KV + + V+ G+GF+ F++ E A
Sbjct: 100 NVFIKNLDKSIDNKAMYDTFSAF---GHILSCKV---VTDENGVNKGYGFVHFETQEAAN 153
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVA 724
+ G +L+G + + +K E++++ + K T + ++N+A
Sbjct: 154 KAIEKVNGMLLNGKKVYVGYFIPRK-ERLMQMGDHQKQFTNVFIKNLA 200
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G +F++NL + + + FS FG++ +V D++ +KG +V + E+A++AIE
Sbjct: 99 GNVFIKNLDKSIDNKAMYDTFSAFGHILSCKVVTDENGV-NKGYGFVHFETQEAANKAIE 157
Query: 359 VLDNSIFQGRLLHV 372
++ + G+ ++V
Sbjct: 158 KVNGMLLNGKKVYV 171
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KNL + V + +L +F Q G I AK+M D KS+ F FI F + A + +K
Sbjct: 192 TNVFIKNLAEDVDDGKLAEFGGQYGSILSAKIM-FDDSKSKGFGFISFEDHEAANDFVKT 250
Query: 61 FNKS 64
N S
Sbjct: 251 INGS 254
>gi|393245425|gb|EJD52935.1| polyadenylate binding protein [Auricularia delicata TFB-10046 SS5]
Length = 665
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 165/406 (40%), Gaps = 55/406 (13%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V L + TE L E F+ G V+ + + D T+RS G AYV Y RA++ L
Sbjct: 49 LYVGELDPSVTEAMLFEVFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALDQL 108
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ S+ + R +M ++ + K T QG +K E+ + KA +
Sbjct: 109 NYSLIKNRACRIMWSQRDPALRK------TGQGNIFIKNLDEQI--------DNKALHDT 154
Query: 421 FMRPDTVVE-NIAR-KHGVSKS-DLLDREANDLAVRIALGETQVIAETKKALTNAGVNVS 477
F V+ +A +HG SK + E + A ++ KK G ++
Sbjct: 155 FAAFGNVLSCKVATDEHGNSKGYGFVHYETAEAAENAIKSVNGMLLNDKKVFV--GHHIP 212
Query: 478 SLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTL 532
E S K D +K VKNL + + ++FGKFG++ L ++
Sbjct: 213 RKERQS--KIDEMKAQYTNIYVKNLDPELGQEGFEELFGKFGNITSAALSKDEEGKSRGF 270
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
V F +AAAA + L G LY+ A K +++ D + ++
Sbjct: 271 GFVNFESHEQAAAAVETLHDTEINGRKLYVARA----------QKKSEREDELRKSYENA 320
Query: 593 RALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK 652
+ + +GV +L++KNL DE LR F G I S KV
Sbjct: 321 KQEKLSKYQGV-------------NLYIKNLEDDIDDEKLRAEFEPF---GTITSCKV-- 362
Query: 653 HLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
+++ KN S GFGF+ F S + AT ++ ++ L + L
Sbjct: 363 -MRDEKNTSKGFGFVCFSSPDEATKAVSEMNNKMIGSKPLYVSLAQ 407
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I VKNL + ++ + F + G IT A L + ++GKSR F F+ F + ++A A++
Sbjct: 228 TNIYVKNLDPELGQEGFEELFGKFGNITSAALSKDEEGKSRGFGFVNFESHEQAAAAVET 287
Query: 61 FNKSYLDTCRISCEIARK 78
+ + ++ ++ A+K
Sbjct: 288 LHDTEINGRKLYVARAQK 305
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + +++LR F G IT K+MR + S+ F F+ F + EA +A+ N
Sbjct: 333 LYIKNLEDDIDDEKLRAEFEPFGTITSCKVMRDEKNTSKGFGFVCFSSPDEATKAVSEMN 392
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 393 NKMIGSKPLYVSLAQR 408
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 608 IDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFI 667
ID + + +++VKNL+ + E + FG K G I S + K + GK S GFGF+
Sbjct: 220 IDEMKAQYTNIYVKNLDPELGQEGFEELFG---KFGNITSAALSKD-EEGK--SRGFGFV 273
Query: 668 EFDSVETATNVCRDLQGTILDGHALILQLCHAKKD-EQVVKKAEKDKSSTKL 718
F+S E A L T ++G L + K + E ++K+ ++ KL
Sbjct: 274 NFESHEQAAAAVETLHDTEINGRKLYVARAQKKSEREDELRKSYENAKQEKL 325
>gi|173421|gb|AAA35320.1| poly(A)-binding protein, partial [Schizosaccharomyces pombe]
Length = 628
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 177/427 (41%), Gaps = 85/427 (19%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L + TE L E F+ G V+ + + D T+RS G AYV + E +A+
Sbjct: 65 SASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKAL 124
Query: 358 EVLDNSIFQGRLLHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQR 400
+ L+ ++ +GR +M P+ K + D + LH++ S K L
Sbjct: 125 DELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSC- 183
Query: 401 REEERKASEASGNTKAWNSLFMRPDTV-VENIARKHGVSKSDLLDREANDLAVRIALGET 459
+ A + GN K + F+ D+V N A +H LL ND V +
Sbjct: 184 ----KVAVDELGNAKGYG--FVHFDSVESANAAIEH--VNGMLL----NDKKVYV----- 226
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
G +VS E S K + LK + +KNL + +E E + +FG+FG
Sbjct: 227 -------------GHHVSRRERQS--KVEALKANFTNVYIKNLDTEITEQEFSDLFGQFG 271
Query: 520 SLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
+ + L + V + A A L K YKG LY+
Sbjct: 272 EITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYV------------ 319
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRK 634
+ +K++ E + ++A + +LE + ++ + +LF+KNL + DE L+
Sbjct: 320 -GRAQKKHER---EEELRKAYEQMKLEKM-------NKYQGVNLFIKNLQDEVDDERLKA 368
Query: 635 HFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALIL 694
F G I S K+ + + + S GFGF+ + + E A ++ +L G L +
Sbjct: 369 EFSAF---GTITSAKI---MTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYV 422
Query: 695 QLCHAKK 701
L K+
Sbjct: 423 ALAQRKE 429
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL V ++RL+ FS G IT AK+M + GKS+ F F+ + T +EA +A+ N
Sbjct: 352 LFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMN 411
Query: 63 KSYLDTCRISCEIARK 78
+ L + +A++
Sbjct: 412 QRMLAGKPLYVALAQR 427
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KNL +TE D F Q GEIT L++ ++ K R F F+ + + A++A+
Sbjct: 247 TNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDE 306
Query: 61 FN 62
N
Sbjct: 307 LN 308
>gi|254578926|ref|XP_002495449.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
gi|238938339|emb|CAR26516.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
Length = 587
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 174/439 (39%), Gaps = 82/439 (18%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
P+S+ D Q+ + L+V L T +E L + FS G+VS + + D TK S G A
Sbjct: 25 PTSTDSDSQKVETSTASLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYA 84
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHKKSS------------DKQEL 386
YV + E+ +AIE L+ + +G+ +M P+ KK S D + L
Sbjct: 85 YVNFNDYEAGRQAIEKLNYTPIKGQPCRIMWSQRDPSLRKKGSGNIFIKNLHADIDNKAL 144
Query: 387 HNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE 446
H++ S L + + E +GN+K + + +SD RE
Sbjct: 145 HDTFSVFGNILSCKIATD----EVTGNSKGFGFVHF----------------ESDEAARE 184
Query: 447 ANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDS 506
A D + L +V + + S LEE A T+ +KN+ ++
Sbjct: 185 AIDAINGMLLNGQEVYVAPHVSRKD---RQSKLEEAKANFTN--------VYIKNISLET 233
Query: 507 SEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLY 561
E E + F K + V L + V + AA A + L + G L+
Sbjct: 234 PEQEFEEFFKKVAPVTSVHLEKDSEGKLRGFGFVNYETHAGAAKAVEELNGVEFHGQQLH 293
Query: 562 LEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVK 621
+ A Q + +R + +LE + ++ + +LF+K
Sbjct: 294 VGRAQKKYERQ----------------QELRRQYEQSKLEKM-------EKYQGVNLFIK 330
Query: 622 NLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRD 681
NL+ DE LR+ F G I SVKV +NGK S GFGF+ F + E AT +
Sbjct: 331 NLDDSIDDERLREEFSPF---GTITSVKVMT-TENGK--SKGFGFVCFSTPEEATKAITE 384
Query: 682 LQGTILDGHALILQLCHAK 700
I+ G L + + K
Sbjct: 385 KNQQIVAGKPLYVAIAQRK 403
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + ++RLR+ FS G IT K+M T++GKS+ F F+ F T +EA +AI N
Sbjct: 327 LFIKNLDDSIDDERLREEFSPFGTITSVKVMTTENGKSKGFGFVCFSTPEEATKAITEKN 386
Query: 63 KSYLDTCRISCEIARK 78
+ + + IA++
Sbjct: 387 QQIVAGKPLYVAIAQR 402
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ S +LF+ + Y+ ED LRE F+K+G V + +++D++T RS+G +V + E+AS
Sbjct: 36 CMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAAS 95
Query: 355 RAIEVLDNSIFQGRLLHVMPARHK 378
AI+ LD GR++ V A +
Sbjct: 96 SAIQALDGRDLHGRVVKVNYANDR 119
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S++ + + + ED LR+ F++ GE+ D +++ ++ G+SR F F+ F + + A AI+
Sbjct: 40 SKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQ 99
>gi|198426742|ref|XP_002131325.1| PREDICTED: similar to cold-inducible RNA-binding protein [Ciona
intestinalis]
Length = 167
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E+ ++FV NL Y ATED+L + FS FG V +V I+ D+DT RS+G A+V + E A+ A
Sbjct: 3 EACKVFVGNLSYDATEDDLTKRFSDFGEVEQVAIITDRDTGRSRGFAFVTFREEEGAATA 62
Query: 357 IEVLDNSIFQGRLLHVMPARHK 378
I+ + F GR + V A+ K
Sbjct: 63 IKEMHEEDFLGRSVTVREAQSK 84
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
++ V NL TED L FS GE+ ++ +D G+SR FAF+ FR E+ A AIK
Sbjct: 6 KVFVGNLSYDATEDDLTKRFSDFGEVEQVAIITDRDTGRSRGFAFVTFREEEGAATAIK 64
>gi|297741250|emb|CBI32381.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 180/437 (41%), Gaps = 85/437 (19%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
S L+V +L T+ +L + FS+ V + + D T RS G YV Y E A+R
Sbjct: 166 FASASLYVGDLDLNVTDSQLHDLFSQLAQVVSIRVCRDSTTHRSLGYGYVNYTDLEDAAR 225
Query: 356 AIEVLDNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLK 398
A++VL+ + G+ + +M P+ K K D + LH++ S L
Sbjct: 226 ALDVLNFTPLNGKPIRIMYSHRDPSIRKSGTGNIFIKNLDKGIDHKALHDTFSAFGNILS 285
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGE 458
+ A++ASG +K HG + D EA A+ G
Sbjct: 286 C-----KVATDASGMSKG------------------HGFVQFD--SEEAAQKAIDKLNG- 319
Query: 459 TQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKF 518
++ K+ V E T ++ N+VF VKN+ +E +L ++FG+F
Sbjct: 320 --MLLNDKQVFVGPFVRKQERE-----STINKEKFNNVF-VKNISEGMTEEDLTRIFGEF 371
Query: 519 GSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQS 573
G + V++ +K V F +AA + + L +++ EW
Sbjct: 372 GPITSVVVMRDGDGKSKCFGFVNFENVDDAAMSVEALNGQKFDDK----EW--------- 418
Query: 574 STSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLR 633
K +K++ E + K + E V D+ + +L++KNL+ D+ L+
Sbjct: 419 YVGKAQKKSER---EIELKSRFEQNMKEAV-------DKFQGANLYIKNLDDSIGDDKLK 468
Query: 634 KHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALI 693
+ F + G I S KV +++ +S G GF+ F S E A+ ++ ++ L
Sbjct: 469 ELFAQF---GTITSCKV---MRDPNGLSRGSGFVAFSSPEEASRALAEMNSKMVVSKPLY 522
Query: 694 LQLCHAKKDEQVVKKAE 710
+ L K+D + +A+
Sbjct: 523 VALAQRKEDRRARLQAQ 539
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KNL + +D+L++ F+Q G IT K+MR +G SR F+ F + +EA A+
Sbjct: 451 ANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEASRALAE 510
Query: 61 FNKSYLDTCRISCEIARK 78
N + + + +A++
Sbjct: 511 MNSKMVVSKPLYVALAQR 528
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKN+ + +TE+ L F + G IT +MR DGKS+ F F+ F +A +++ N
Sbjct: 350 VFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSKCFGFVNFENVDDAAMSVEALN 409
Query: 63 KSYLD 67
D
Sbjct: 410 GQKFD 414
>gi|356572504|ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 636
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 177/429 (41%), Gaps = 91/429 (21%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L ++ L + FS+F +++ V + D T +S Y+ + P+ A RAIE+
Sbjct: 14 LYVGDLHPDVSDSHLVDAFSEFKSLASVRVCKDSSTGKSLCYGYLNFVSPQDAIRAIELK 73
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+NS G+ + VM +R R + RK+ A GN L
Sbjct: 74 NNSTLNGKAMRVMWSR-----------------------RDPDARKS--AIGN------L 102
Query: 421 FMR--PDTV----VENIARKHG-VSKSDLLDREANDLAVRIALGETQVIAE--TKKALTN 471
F++ P+++ +++I +K+G + S ++ E G Q +E +K A+
Sbjct: 103 FVKNLPESIDNAGLQDIFKKYGNILSSKVVTSEDGK---SKGYGFVQFESEESSKVAIEK 159
Query: 472 AGVNVSSLEEFSAGKTDGLKRSNHVF----------LVKNLPYDSSEGELAKMFGKFGSL 521
+ +E GK +K+S+ + +KNL D SE L + F FG +
Sbjct: 160 LNGYTVADKELYVGKF--VKKSDRILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKI 217
Query: 522 DKVILPS-----TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTS 576
+++ +K V + P +A A + + + LY+ A
Sbjct: 218 VSLVIAKDNNGMSKGFGFVNYDNPDDAKKAMEAMNGSQLGSKILYVARA----------- 266
Query: 577 KGNQKNDAVVGEHDAKR-ALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKH 635
+ A+R +L Q E I + + +++VKN++ DE LR H
Sbjct: 267 -----------QKKAEREQILHHQFEEKQKEQIL--KYKGSNIYVKNIDDHVSDEELRDH 313
Query: 636 FGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
F G I S K+ +++ K +S GFGF+ F + E A G + G L +
Sbjct: 314 FSAC---GTITSAKI---MRDDKGISKGFGFVCFSTPEEANKAVNTFHGFMYHGKPLYVA 367
Query: 696 LCHAKKDEQ 704
L K+D +
Sbjct: 368 LAQRKEDRK 376
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S I VKN+ +V+++ LRD FS G IT AK+MR G S+ F F+ F T +EA +A+
Sbjct: 294 SNIYVKNIDDHVSDEELRDHFSACGTITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNT 353
Query: 61 FN 62
F+
Sbjct: 354 FH 355
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNLP+ + L+D F + G I +K++ ++DGKS+ + F+ F +E+ ++ AI+ N
Sbjct: 102 LFVKNLPESIDNAGLQDIFKKYGNILSSKVVTSEDGKSKGYGFVQFESEESSKVAIEKLN 161
Query: 63 KSYLDTCRISCEIARKVGDPNMPRPWSRYS 92
+ + K D +P P +RY+
Sbjct: 162 GYTVADKELYVGKFVKKSDRILPGPDARYT 191
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G LFV+NLP + L++ F K+GN+ +V +D K SKG +V + ES+ AIE
Sbjct: 100 GNLFVKNLPESIDNAGLQDIFKKYGNILSSKVVTSEDGK-SKGYGFVQFESEESSKVAIE 158
Query: 359 VLDNSIFQGRLLHV 372
L+ + L+V
Sbjct: 159 KLNGYTVADKELYV 172
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 166/412 (40%), Gaps = 61/412 (14%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L T TE + E F+ G V+ + + D T+RS G AYV Y RA+
Sbjct: 44 SASLYVGELDPTVTEAMIFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTADGERAL 103
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
E L+ S+ +GR +M S + T QG +K E+ + KA
Sbjct: 104 EQLNYSLIKGRPCRIM------WSQRDPALRKTGQGNIFIKNLDEQI--------DNKAL 149
Query: 418 NSLFMRPDTVV------ENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTN 471
+ F+ V+ + R G EA + A++ G ++ KK
Sbjct: 150 HDTFVAFGNVLSCKVATDEQGRSKGYGFVHYETAEAAETAIKAVNG---MLLNDKKVYV- 205
Query: 472 AGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP---- 527
G ++ E S K D +K +KNL + ++ E ++F ++GS+ I+
Sbjct: 206 -GPHIPRKERQS--KLDEMKAQFTNLYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDE 262
Query: 528 -STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVV 586
+K V + EA AA L KG LY+ A Q +
Sbjct: 263 GRSKGFGFVNYESHEEAQAAVDNLHDTDLKGKKLYVTRA------QKKAER--------- 307
Query: 587 GEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRIL 646
E + +R+ + ++E ++ + + +L+VKNL D+ LR F G I
Sbjct: 308 -EEELRRSYEQAKMEKLS-------KYQGVNLYVKNLEDDVDDDKLRAEFEPF---GTIT 356
Query: 647 SVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
S KV + + K S GFGF+ F S + AT ++ ++ L + L
Sbjct: 357 SCKV---MSDEKGSSKGFGFVCFSSPDEATKAIAEMNNKMIGSKPLYVSLAQ 405
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL V +D+LR F G IT K+M + G S+ F F+ F + EA +AI N
Sbjct: 331 LYVKNLEDDVDDDKLRAEFEPFGTITSCKVMSDEKGSSKGFGFVCFSSPDEATKAIAEMN 390
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 391 NKMIGSKPLYVSLAQR 406
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 35/58 (60%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ + +KNL VT++ + F++ G +T A + +G+S+ F F+ + + +EA+ A+
Sbjct: 226 TNLYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDEGRSKGFGFVNYESHEEAQAAV 283
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + + L D F G + K+ + G+S+ + F+ + T + AE AIK N
Sbjct: 135 IFIKNLDEQIDNKALHDTFVAFGNVLSCKVATDEQGRSKGYGFVHYETAEAAETAIKAVN 194
Query: 63 KSYLDTCRISCEIARKVGDPNMPR 86
L+ ++ VG P++PR
Sbjct: 195 GMLLNDKKV------YVG-PHIPR 211
>gi|374850838|dbj|BAL53816.1| RNA-binding region RNP-1 [uncultured planctomycete]
Length = 98
Score = 71.2 bits (173), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V NLP+ T DELRE F++FG V+ I+VD+DT RS+G +V A + A AI +
Sbjct: 5 LYVGNLPFNTTVDELREAFARFGTVTRAQIIVDRDTGRSRGFGFVEMA--DGADEAIAQM 62
Query: 361 DNSIFQGRLLHV 372
+ +IFQGR L V
Sbjct: 63 NGAIFQGRQLTV 74
>gi|156836003|ref|XP_001642245.1| hypothetical protein Kpol_193p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112721|gb|EDO14387.1| hypothetical protein Kpol_193p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 591
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 15/107 (14%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYA-----------I 349
+FVRN+PY ATE+ L EHFSKFG V VVDK+T +KG A+V +
Sbjct: 157 IFVRNVPYDATEESLAEHFSKFGPVKYALPVVDKETGLAKGTAFVAFKDEKTYTFCVNNA 216
Query: 350 PESASRAI----EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ 392
P + + ++ +VL +++GR+L V P ++ ++K HN++ +
Sbjct: 217 PAAGATSLLIDDDVLPEYVYEGRVLSVSPTLQREEANKMAEHNASKR 263
>gi|17567133|ref|NP_510260.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
gi|3876085|emb|CAA90444.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
Length = 692
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 181/448 (40%), Gaps = 83/448 (18%)
Query: 278 IVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTK 337
++ G P ++ L++ +L +E L E FS G V + + D ++
Sbjct: 36 VIQQGPPPTNIGYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSR 95
Query: 338 RSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHKKSSDK-------QE 385
S G AYV + P A RA++ ++ + GR + +M PA + + +
Sbjct: 96 LSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRV 155
Query: 386 LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVEN-IARKHGVSKSDLLD 444
+ N + T +L + A++ GN+K + + + + I + +G+ SD
Sbjct: 156 IDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSD--- 212
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPY 504
++ +G+ Q A+ K L + GLK +N VF VKN
Sbjct: 213 -------KKVYVGKFQPRAQRMKELGES----------------GLKYTN-VF-VKNFGE 247
Query: 505 DSSEGELAKMFGKFGSLDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEW 564
+ +L+ MF KFG + T A+V+ +A KG ++ +
Sbjct: 248 HLDQEKLSAMFSKFGEI---------TSAVVM----TDAQGKPKGFG---------FVAF 285
Query: 565 APSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADID----------PDRVE 614
A D Q+ + ND+++ D K ++ Q + A++ R +
Sbjct: 286 ADQDAAGQAV----EKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQ 341
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
+L+VKN+ D+ LR HF G I S KV +NG+ S GFGF+ F+ E
Sbjct: 342 GVNLYVKNIEEDLNDDGLRDHFSSF---GTITSAKVMVD-ENGR--SKGFGFVCFEKPEE 395
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKD 702
AT D+ ++ L + L K+D
Sbjct: 396 ATAAVTDMNSKMIGAKPLYVALAQRKED 423
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V+N+ +D LR+HFS FG ++ ++VD++ RSKG +V + PE A+ A+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENG-RSKGFGFVCFEKPEEATAAVTDM 403
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
++ + + L+V A+ +K + +L + Q TL R +ASG A L
Sbjct: 404 NSKMIGAKPLYVALAQ-RKEDRRAQLASQYMQRLATL-------RMGQQASG-VPAMTQL 454
Query: 421 F 421
+
Sbjct: 455 Y 455
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN +++ +++L FS+ GEIT A +M GK + F F+ F + A +A++
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 61 FNKSYLDT--CRISCEIARK 78
N S L+ C++S A+K
Sbjct: 298 LNDSILEGTDCKLSVCRAQK 317
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKN+ + + +D LRD FS G IT AK+M ++G+S+ F F+ F +EA A+ N
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 63 KSYLDTCRISCEIARK 78
+ + +A++
Sbjct: 405 SKMIGAKPLYVALAQR 420
>gi|347756146|ref|YP_004863709.1| RNA-binding proteins (RRM domain) [Candidatus Chloracidobacterium
thermophilum B]
gi|347588663|gb|AEP13192.1| RNA-binding proteins (RRM domain) [Candidatus Chloracidobacterium
thermophilum B]
Length = 112
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L+V NL + T ++LR+HFSK G V +V D+DT RS+G +V + E +RAIE+
Sbjct: 2 KLYVGNLSFQTTSEDLRDHFSKAGTVESAQVVEDRDTNRSRGFGFVEFTSTEDGNRAIEM 61
Query: 360 LDNSIFQGRLLHVMPARHKK 379
+ F GR L V AR ++
Sbjct: 62 FHGTEFNGRTLTVNEARPRE 81
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
L+V NL+F+T E+LR HF K G + S +V + N S GFGF+EF S E
Sbjct: 3 LYVGNLSFQTTSEDLRDHFS---KAGTVESAQVVE--DRDTNRSRGFGFVEFTSTEDGNR 57
Query: 678 VCRDLQGTILDGHALIL 694
GT +G L +
Sbjct: 58 AIEMFHGTEFNGRTLTV 74
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKY 60
++ V NL T + LRD FS+ G + A+++ +D +SR F F+ F + ++ AI+
Sbjct: 2 KLYVGNLSFQTTSEDLRDHFSKAGTVESAQVVEDRDTNRSRGFGFVEFTSTEDGNRAIEM 61
Query: 61 FNKSYLDTCRISCEIAR 77
F+ + + ++ AR
Sbjct: 62 FHGTEFNGRTLTVNEAR 78
>gi|366999420|ref|XP_003684446.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
gi|357522742|emb|CCE62012.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
Length = 579
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 179/444 (40%), Gaps = 87/444 (19%)
Query: 282 GNPSSSSKDVQQEVLE--SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS 339
G P++S + ++ S L+V L + +E L + FS G V+ + + D TK S
Sbjct: 31 GTPAASETEANNSNVDTTSASLYVGELDPSVSEALLYDIFSPIGPVTSIRVCRDAITKTS 90
Query: 340 KGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHKKSS------------D 382
G AYV + ES AIE L+ S +G+ +M PA KK + D
Sbjct: 91 LGYAYVNFNDHESGRTAIEKLNYSPIKGKPCRIMWSQRDPALRKKGAGNIFIKNLHPDID 150
Query: 383 KQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSD 441
+ LH++ S L + A++ +G +K + + F + VE + +G+
Sbjct: 151 NKALHDTFSVFGNILSC-----KIATDETGKSKGFGFVHFEEDNAAVEAVDAINGMM--- 202
Query: 442 LLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKN 501
L RE V +A ++ E+K LEE A T+ VKN
Sbjct: 203 LNGRE-----VYVAQHVSKKDRESK------------LEEVKANFTN--------VYVKN 237
Query: 502 LPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYK 556
+ D+ E E +F K+G + + + + + F +AA A + L +K
Sbjct: 238 VDVDTPEDEFTALFSKYGPITSIAMEKDSEGKFRGFGFINFENHDDAAKAVEELNDLEFK 297
Query: 557 GVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESR 616
G LY+ A K ++ + +++A R + +GV
Sbjct: 298 GQKLYVGRA----------QKKYERLQELKKQYEASRLEKLAKYQGV------------- 334
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+LFVKNL+ DE L F G I S KV ++N + S FGF+ F + E AT
Sbjct: 335 NLFVKNLDDSIDDEKLEAEFAPF---GSITSAKV---MRNEEGKSKNFGFVCFSTPEEAT 388
Query: 677 NVCRDLQGTILDGHALILQLCHAK 700
+ I+ G L + + K
Sbjct: 389 KAITEKNQQIVAGKPLYVAIAQRK 412
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + +++L F+ G IT AK+MR ++GKS+ F F+ F T +EA +AI N
Sbjct: 336 LFVKNLDDSIDDEKLEAEFAPFGSITSAKVMRNEEGKSKNFGFVCFSTPEEATKAITEKN 395
Query: 63 KSYLDTCRISCEIARK 78
+ + + IA++
Sbjct: 396 QQIVAGKPLYVAIAQR 411
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN+ ED FS+ G IT + + +GK R F FI F +A +A++
Sbjct: 231 TNVYVKNVDVDTPEDEFTALFSKYGPITSIAMEKDSEGKFRGFGFINFENHDDAAKAVEE 290
Query: 61 FN 62
N
Sbjct: 291 LN 292
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 175/444 (39%), Gaps = 92/444 (20%)
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
NPS+ S + L+V +L TE L E FS G + + + D T+RS G
Sbjct: 2 NPSAPSYPM-------ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGY 54
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHK------------KSSDKQE 385
AYV + P A RA++ ++ + +G+ + +M P+ HK KS D +
Sbjct: 55 AYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLHKSGVGNIFIKNLDKSIDNKA 114
Query: 386 LHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDR 445
L+++ S A GN + + EN ++ +G +
Sbjct: 115 LYDTFS------------------AFGNILSCKVV------CDENGSKGYG-----FVHF 145
Query: 446 EANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYD 505
E + A R ++ +K S +E A K +V+ +KN D
Sbjct: 146 ETQEAAERAIEKMNGMLLNDRKVFVG---RFKSRKEREAELGARAKEFTNVY-IKNFGED 201
Query: 506 SSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPL 560
+ L +FGKFG V + + +K V F +A A + K G +
Sbjct: 202 MDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Query: 561 YLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFV 620
Y+ A V Q+ + KR + + + +T R + +L+V
Sbjct: 262 YVGRAQKKVERQT----------------ELKRKFEQMKQDRIT-------RYQGVNLYV 298
Query: 621 KNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCR 680
KNL+ DE LRK F G I S KV ++ G+ S GFGF+ F S E AT
Sbjct: 299 KNLDDGIDDERLRKEFSPF---GTITSAKV--MMEGGR--SKGFGFVCFSSPEEATKAVT 351
Query: 681 DLQGTILDGHALILQLCHAKKDEQ 704
++ G I+ L + L K++ Q
Sbjct: 352 EMNGRIVATKPLYVALAQRKEERQ 375
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ++RLR FS G IT AK+M + G+S+ F F+ F + +EA +A+ N
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVM-MEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 63 KSYLDTCRISCEIARK 78
+ T + +A++
Sbjct: 355 GRIVATKPLYVALAQR 370
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KN + + ++RL+D F + G K+M + GKS+ F F+ F ++A++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 61 FNKSYLDTCRISCEIARK 78
N L+ +I A+K
Sbjct: 251 MNGKELNGKQIYVGRAQK 268
>gi|302498318|ref|XP_003011157.1| hypothetical protein ARB_02679 [Arthroderma benhamiae CBS 112371]
gi|291174705|gb|EFE30517.1| hypothetical protein ARB_02679 [Arthroderma benhamiae CBS 112371]
Length = 803
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 161/373 (43%), Gaps = 59/373 (15%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+ V++LP T + L ++FSQ + A + + + +S+ + F+ F ++A+ A +
Sbjct: 97 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAREL 156
Query: 62 NKSYLDTCRISCEIA----RKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKT 117
N S + +I E+A R++ D + + K KE+ E + L K +
Sbjct: 157 NNSVFEGKKIKIELAEPRHREI-DEKAGKSVPSSAPSKAKELKEKRRLESLPPKLIIRNL 215
Query: 118 IEKVTENDDPQLLEFLQVMQPRVK----SKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
+TE PQ LE L ++K K + G + + K +E + + G E
Sbjct: 216 PWSITE---PQHLELLFRSYGKIKHAVVPKKGSRVAGFGFVVMRGRKNAERAIEGVNGKE 272
Query: 174 KSITLHVKSDKSNVITDSQATEKSK----NAAADELMSDMDYFKSRVKKDWSDSE----- 224
D + D A EK + N AA+E S K++ DSE
Sbjct: 273 --------VDGRTLAVD-WAVEKDEWENMNKAAEE---------SDGKQEAGDSEEAVAE 314
Query: 225 SEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNP 284
+E DD + D E+EE D E +G ED + +I
Sbjct: 315 NEHLDVVDDGESDAISEDEE-------DGGVE------------LGNEDEDEDISMGDAE 355
Query: 285 SSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAY 344
++ +++ + +F+RNLP++AT++ L EHFSKFG V +V+D T+R KG A+
Sbjct: 356 DDEQEEEEEDDRNASTIFIRNLPFSATDETLHEHFSKFGPVRYARVVLDPATERPKGTAF 415
Query: 345 VLYAIPESASRAI 357
V + E AS I
Sbjct: 416 VCFYKAEDASSCI 428
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFVR+LP TAT + L E+FS+ + +V+D TK+SKG +V + E A A L
Sbjct: 97 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAREL 156
Query: 361 DNSIFQGRLLHVMPA--RHKKSSDK--QELHNSTSQGTKTLKQRR 401
+NS+F+G+ + + A RH++ +K + + +S K LK++R
Sbjct: 157 NNSVFEGKKIKIELAEPRHREIDEKAGKSVPSSAPSKAKELKEKR 201
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 66/293 (22%)
Query: 276 GEIVDPGNPSSSSKDVQQEVLES--GRLFVRNLPYTATEDE-LREHFSKFGNVSEVHIVV 332
G+ V PS + + ++ LES +L +RNLP++ TE + L F +G + H VV
Sbjct: 183 GKSVPSSAPSKAKELKEKRRLESLPPKLIIRNLPWSITEPQHLELLFRSYGKIK--HAVV 240
Query: 333 DKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ 392
K R G +V+ ++A RAIE ++ GR L V A +K E N
Sbjct: 241 PKKGSRVAGFGFVVMRGRKNAERAIEGVNGKEVDGRTLAVDWA-----VEKDEWENMN-- 293
Query: 393 GTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAV 452
+ A E+ G +A +S + V EN D++D
Sbjct: 294 ------------KAAEESDGKQEAGDS----EEAVAEN-------EHLDVVDD------- 323
Query: 453 RIALGETQVIAETKKALTNAGVNVSSL---EEFSAG--------KTDGLKRSNHVFLVKN 501
GE+ I+E ++ + GV + + E+ S G + + R+ ++N
Sbjct: 324 ----GESDAISEDEE---DGGVELGNEDEDEDISMGDAEDDEQEEEEEDDRNASTIFIRN 376
Query: 502 LPYDSSEGELAKMFGKFGSLD--KVIL-PST---KTLALVVFLEPVEAAAAFK 548
LP+ +++ L + F KFG + +V+L P+T K A V F + +A++ +
Sbjct: 377 LPFSATDETLHEHFSKFGPVRYARVVLDPATERPKGTAFVCFYKAEDASSCIR 429
>gi|18415425|ref|NP_567594.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|51971865|dbj|BAD44597.1| putative protein [Arabidopsis thaliana]
gi|107738041|gb|ABF83619.1| At4g20030 [Arabidopsis thaliana]
gi|332658864|gb|AEE84264.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 152
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 51/75 (68%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ ++ VRNLP++ +ED L+ FS FG ++EV ++ D+ KRSKG A++ + + A AI
Sbjct: 39 ASKIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAI 98
Query: 358 EVLDNSIFQGRLLHV 372
E +D ++ GR++++
Sbjct: 99 ETMDRRMYNGRMIYI 113
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIK 59
S+I V+NLP +ED L+ FS GEI + KL++ + K S+ +AFI F ++ +A AI+
Sbjct: 40 SKIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIE 99
Query: 60 YFNKSYLDTCRISCEIAR 77
++ + I +IA+
Sbjct: 100 TMDRRMYNGRMIYIDIAK 117
>gi|170060227|ref|XP_001865709.1| ribosomal biogenesis protein Gar2 [Culex quinquefasciatus]
gi|167878773|gb|EDS42156.1| ribosomal biogenesis protein Gar2 [Culex quinquefasciatus]
Length = 418
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
P NP + E E G LFV++LP+ E +LR FS+FG+V+ VH+ K T RSK
Sbjct: 36 PKNPPLGA----PERYEKGILFVKHLPHGFFEKQLRAFFSQFGDVTRVHVARSKRTLRSK 91
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLH--VMPARHKK 379
G AYV + E A A E +DN + G++L ++PA ++
Sbjct: 92 GYAYVEFRYREVAQIAQETMDNYLMFGKILKTVLLPANTRR 132
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDG-KSRQFAFIGFRTEQEAEEAIKYF 61
+ VK+LP E +LR FFSQ G++T + R+K +S+ +A++ FR + A+ A +
Sbjct: 52 LFVKHLPHGFFEKQLRAFFSQFGDVTRVHVARSKRTLRSKGYAYVEFRYREVAQIAQETM 111
Query: 62 NKSYLDTCRISCEIARKVGDPNMPRPWSR 90
+ +YL +I + +PR + +
Sbjct: 112 D-NYLMFGKILKTVLLPANTRRIPRQYEK 139
>gi|356542361|ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
Length = 958
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 188/448 (41%), Gaps = 98/448 (21%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
++ V+NLP E+ +RD FS G + D + +T S+ FAF+ F +Q+AE+AI+
Sbjct: 276 KLIVRNLPFKAKENEIRDMFSSAGCVWDVFIPQKTNTDLSKGFAFVKFTCKQDAEKAIQK 335
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
N S I+ + W+ K++ + N LA+++G++ ++
Sbjct: 336 LNGSKFAKRLIAVD-------------WAV-----SKKIFSSDTNNALASEKGQQNMSDE 377
Query: 121 VTENDDPQLLEFLQVMQPRVKSKMWANDT-LIGLMADQKAKVSENISQAIKGGEKSIT-- 177
+ ++D +L++ +S +DT M ++ +N + +K +
Sbjct: 378 DSTDEDFELVD--------KRSGQGDSDTDYSSAMEEEGTPPEDNFDKEADIAKKVLNNL 429
Query: 178 LHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDD 237
L S ++V DS +++K + +DE++ D D + + +ESE S
Sbjct: 430 LTSSSKGTSVNNDSMLIKENKGSRSDEIVKDAD--------EKASNESEKVS-------- 473
Query: 238 DGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLE 297
G S E S ++++ + G ED D+Q+ V
Sbjct: 474 -------------GVSKPEISS--RNNLLNPKGTED----------------DLQRTV-- 500
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
F+ NLP+ +E+++ FS FG + V+ + TKR +G ++ + E+A+ I
Sbjct: 501 ----FISNLPFECDNEEVKQRFSGFGEIEYFVPVLHQVTKRPRGTGFLKFKTVEAANTVI 556
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
+ G LL P + K+ DK+ H+ +E E+ +E +
Sbjct: 557 STARAASGMGILLKGRPLKVLKALDKKSAHD------------KELEKAKNEVHDHR--- 601
Query: 418 NSLFMRPDTVVENIARKHGVSKSDLLDR 445
N + ++E GVS SD+L R
Sbjct: 602 NLYLAKEGLILEGTTAAEGVSASDMLKR 629
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S LFV NLPY+ + +L E FS+ G V IV K + + +G YV +A+ E A+RAI
Sbjct: 17 SSTLFVSNLPYSFSNSQLEETFSEVGPVRRCFIVTQKGSAQHRGFGYVQFAVEEDANRAI 76
Query: 358 EVLDNSIFQGRLL---HVMP 374
E+ + + +GR + H MP
Sbjct: 77 ELKNGTSVEGRKIVVKHAMP 96
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 70.9 bits (172), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 51/89 (57%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ +LFV L + T+D ++E FS FG V+EV I+ D+DT RS+G +V +A + A
Sbjct: 39 MSGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEA 98
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQ 384
A++ LD GR + V A + D+Q
Sbjct: 99 ALQALDGRDLAGRTIRVNYATKQSPQDRQ 127
Score = 47.0 bits (110), Expect = 0.036, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S++ V L T+D +++ FS GE+T+ K++ +D G+SR F F+ F T+Q+AE A++
Sbjct: 42 SKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQ 101
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ + +L+V N+ + +EDELR F +FGNV++V++ +DK T R +G A+V + PE A
Sbjct: 1 MSNSKLYVGNMSFKTSEDELRSAFGQFGNVTDVYVAMDKMTGRPRGFAFVTMSTPEEAKI 60
Query: 356 AIEVLDNSIFQGRLLHVMPARHKK 379
A E L+ GR L V AR K+
Sbjct: 61 AAEKLNGVDLGGRALTVNEARPKE 84
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
L+V N++FKT ++ LR FG+ G + V V G+ GF F+ + E A
Sbjct: 6 LYVGNMSFKTSEDELRSAFGQF---GNVTDVYVAMDKMTGR--PRGFAFVTMSTPEEAKI 60
Query: 678 VCRDLQGTILDGHALILQLCHAKKD 702
L G L G AL + K++
Sbjct: 61 AAEKLNGVDLGGRALTVNEARPKEE 85
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIK 59
S++ V N+ +ED LR F Q G +TD + M G+ R FAF+ T +EA+ A +
Sbjct: 4 SKLYVGNMSFKTSEDELRSAFGQFGNVTDVYVAMDKMTGRPRGFAFVTMSTPEEAKIAAE 63
Query: 60 YFNKSYLDTCRISCEIAR 77
N L ++ AR
Sbjct: 64 KLNGVDLGGRALTVNEAR 81
>gi|326484107|gb|EGE08117.1| ribosome biogenesis [Trichophyton equinum CBS 127.97]
Length = 750
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 160/364 (43%), Gaps = 41/364 (11%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+ V++LP T + L ++FSQ + A + + + +S+ + F+ F ++A+ A K
Sbjct: 49 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAKEL 108
Query: 62 NKSYLDTCRISCEIA----RKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKT 117
N S + +I E+A R++ D + + K KE+ E + L K +
Sbjct: 109 NNSVFEGKKIKIELAEPRHREI-DEKEGKSVPSSAPSKAKELKEKRRLESLPPKLIIRNL 167
Query: 118 IEKVTENDDPQLLEFLQVMQPRVK----SKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
+TE PQ LE L ++K K + G + + K +E + + G E
Sbjct: 168 PWSITE---PQHLELLFRSYGKIKHAVVPKKGSRVAGFGFVVMRGRKNAERAIEGVNGKE 224
Query: 174 KSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDD 233
D + D A EK + ++ + D + + + + +E+E DD
Sbjct: 225 --------VDGRTLAVD-WAVEKDEWENMNKAAEESDGKEEAGESEEAAAENEHLDVVDD 275
Query: 234 DDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQ 293
+ D E+EE D E D+ ED +G+I ++ ++
Sbjct: 276 GESDAISEDEE-------DGGVELDN------------EDEDGDISMGDAEDDELEEEEE 316
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
+ + +F+RNLP++AT++ L EHFSKFG V +V+D T+R KG A+V + E A
Sbjct: 317 DDRNASTIFIRNLPFSATDEALHEHFSKFGPVRYARVVLDPATERPKGTAFVCFYKAEDA 376
Query: 354 SRAI 357
S I
Sbjct: 377 SSCI 380
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFVR+LP TAT + L E+FS+ + +V+D TK+SKG +V + E A A + L
Sbjct: 49 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAKEL 108
Query: 361 DNSIFQGRLLHVMPA--RHKKSSDKQ--ELHNSTSQGTKTLKQRREEE 404
+NS+F+G+ + + A RH++ +K+ + +S K LK++R E
Sbjct: 109 NNSVFEGKKIKIELAEPRHREIDEKEGKSVPSSAPSKAKELKEKRRLE 156
>gi|290992139|ref|XP_002678692.1| RRM domain-containing protein [Naegleria gruberi]
gi|284092305|gb|EFC45948.1| RRM domain-containing protein [Naegleria gruberi]
Length = 98
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
++FV NLPY L+EHFS GNV+ I D TKRSKGI +V + E+A++AI +
Sbjct: 11 KVFVSNLPYRTNWSALKEHFSAAGNVTYARIFTDAQTKRSKGIGFVEFDTAEAAAKAITM 70
Query: 360 LDNSIFQGRLLHVMPARHKKSSDK 383
+ S F R ++V + K+ +++
Sbjct: 71 FNESEFNARKIYVRQFQEKEKTEQ 94
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 190/439 (43%), Gaps = 87/439 (19%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
V + L+V +L T+ +L + F + G V V + D T+RS G YV Y+ P+ A+
Sbjct: 14 VANTASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAA 73
Query: 355 RAIEVLDNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTL 397
RA+++L+ + G+ + +M P+ K KS D + LH++ S L
Sbjct: 74 RALDLLNFTPLNGKPIRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNIL 133
Query: 398 KQRREEERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIAL 456
+ A++ SG +K + + F ++ I + +G+ +D ++ +
Sbjct: 134 SC-----KIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGMLIND----------KQVYV 178
Query: 457 GETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFG 516
G+ E + AL + N+V+ VKNL ++E +L +FG
Sbjct: 179 GQFLRKQERETALNKT-------------------KFNNVY-VKNLSESTTEEDLKNIFG 218
Query: 517 KFGSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS 571
+FG + V++ +K V F +AA A + L K++ EW
Sbjct: 219 EFGIITSVVVMRDGDGKSKCFGFVNFENADDAAEAVEALNGKKFDEK----EW------- 267
Query: 572 QSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDEN 631
K +K + E + K EQ ++ V D+ + +L++KNL+ D+
Sbjct: 268 --YVGKAQKKYER---ELELK-GRFEQSMKEVV------DKFQGVNLYIKNLDDSIGDDK 315
Query: 632 LRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHA 691
L++ F E G I S KV +++ +S G GF+ F + E A+ ++ G ++
Sbjct: 316 LKELFSEF---GTITSCKV---MRDPSGISRGSGFVAFSTSEEASRALTEMNGKMVVSKP 369
Query: 692 LILQLCHAKKDEQVVKKAE 710
L + L K++ + +A+
Sbjct: 370 LYVALAQRKEERRARLQAQ 388
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + +D+L++ FS+ G IT K+MR G SR F+ F T +EA A+ N
Sbjct: 302 LYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMN 361
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 362 GKMVVSKPLYVALAQR 377
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGF 48
+ VKNL + TE+ L++ F + G IT +MR DGKS+ F F+ F
Sbjct: 199 VYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNF 244
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I +KNL K + L D FS G I K+ G+S+ + F+ F E+ A+ AI
Sbjct: 106 ANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDK 165
Query: 61 FN 62
N
Sbjct: 166 LN 167
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 70.5 bits (171), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 51/89 (57%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ +LFV L + T+D ++E FS FG V+EV I+ D+DT RS+G +V +A + A
Sbjct: 39 MSGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEA 98
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQ 384
A++ LD GR + V A + D+Q
Sbjct: 99 ALQALDGRDLAGRTIRVNYATKQSPQDRQ 127
Score = 47.0 bits (110), Expect = 0.042, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S++ V L T+D +++ FS GE+T+ K++ +D G+SR F F+ F T+Q+AE A++
Sbjct: 42 SKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQ 101
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 186/439 (42%), Gaps = 99/439 (22%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + T+ +L ++F++ V V + D T S G YV Y+ + A +A++ L
Sbjct: 48 LYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQKL 107
Query: 361 DNSIFQGRLLHVMPARHK-----------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ S G+++ + + KS D + LH + S G T+
Sbjct: 108 NYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFS-GCGTIV----S 162
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIA 463
+ A++ G ++ + F++ DT E+ A K+ + K L + ND + +
Sbjct: 163 CKVATDHMGQSRGYG--FVQFDT--EDSA-KNAIEK--LNGKVLNDKQIFV--------- 206
Query: 464 ETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDK 523
G + E SA D +K +N VKNL +++ EL FG++GS+
Sbjct: 207 ---------GPFLRKEERESA--ADKMKFTN--VYVKNLSEATTDDELKTTFGQYGSISS 253
Query: 524 VIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKG 578
++ ++ V F P +AA A + L K++ EW
Sbjct: 254 AVVMRDGDGKSRCFGFVNFENPEDAARAVEALNGKKFDDK----EW-------------- 295
Query: 579 NQKNDAVVGEHDAKRALLEQQLE-------GVTDADIDPDRVESRSLFVKNLNFKTCDEN 631
VG+ K E++LE G +D ++ + +L+VKNL+ DE
Sbjct: 296 ------YVGKAQKKS---ERELELSRRYEQGSSDGG---NKFDGLNLYVKNLDDTVTDEK 343
Query: 632 LRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHA 691
LR+ F E G I S KV +++ S G GF+ F + A+ V ++ G ++ G
Sbjct: 344 LRELFAEF---GTITSCKV---MRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKP 397
Query: 692 LILQLCHAKKDEQVVKKAE 710
L + L K++ + +A+
Sbjct: 398 LYVALAQRKEERRAKLQAQ 416
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + T+D L+ F Q G I+ A +MR DGKSR F F+ F ++A A++
Sbjct: 225 TNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEA 284
Query: 61 FNKSYLD 67
N D
Sbjct: 285 LNGKKFD 291
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL VT+++LR+ F++ G IT K+MR G S+ F+ F EA + N
Sbjct: 330 LYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMN 389
Query: 63 KSYLDTCRISCEIARK 78
+ + +A++
Sbjct: 390 GKMVGGKPLYVALAQR 405
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL K V L + FS G I K+ G+SR + F+ F TE A+ AI+ N
Sbjct: 136 LFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLN 195
Query: 63 KSYLDTCRI 71
L+ +I
Sbjct: 196 GKVLNDKQI 204
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G LFV+NL + L E FS G + + D +S+G +V + +SA AIE
Sbjct: 134 GNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDH-MGQSRGYGFVQFDTEDSAKNAIE 192
Query: 359 VLDNSIFQGRLLHVMPARHKK----SSDKQELHN 388
L+ + + + V P K+ ++DK + N
Sbjct: 193 KLNGKVLNDKQIFVGPFLRKEERESAADKMKFTN 226
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 16/108 (14%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK-HLKNGKNVSMGFGFIEFDSVETA 675
+LFVKNL+ ++ L + F G I+S KV H+ S G+GF++FD+ ++A
Sbjct: 135 NLFVKNLDKSVDNKTLHEAFSGC---GTIVSCKVATDHMGQ----SRGYGFVQFDTEDSA 187
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
N L G +L+ + + ++K E++ ++ K+ NV
Sbjct: 188 KNAIEKLNGKVLNDKQIFV--------GPFLRKEERESAADKMKFTNV 227
>gi|50543120|ref|XP_499726.1| YALI0A03509p [Yarrowia lipolytica]
gi|49645591|emb|CAG83649.1| YALI0A03509p [Yarrowia lipolytica CLIB122]
Length = 701
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 26/160 (16%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYA--------- 348
S +FVRN+PY AT + L+EHF FG V V+DK T + +G A+V +
Sbjct: 285 SSTVFVRNIPYDATAESLKEHFENFGAVRYALPVIDKTTGQPRGTAFVAFESSDDCDKCV 344
Query: 349 --IPESASRAIEVLDNS----IFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRRE 402
P +A+ ++ V D++ +F+GR+L V A +++++K HNS + K +E
Sbjct: 345 ERAPAAATTSLLVADDTDPRYVFEGRILAVTQAVQRETANKLSEHNSKKRAEALGKLPKE 404
Query: 403 EERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDL 442
++R+ N + + EN A + K+D+
Sbjct: 405 KDRR-----------NVFLINEGRIGENTALGMTLPKADM 433
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFVR++P T +EL + FS+ V +V + TK SKG +V + E A+ A+
Sbjct: 16 LFVRSIPLEVTNEELADFFSQDFPVKHAVVVTNAATKESKGFGFVSFTTEEDAAEALLKC 75
Query: 361 DNSIFQGRLLHVMPA--RHKKSSDKQELHNSTSQGTKTLKQR 400
+G++L + A R +K+ + + +S T K++
Sbjct: 76 RKQKLKGKILQIEFAKPRERKTREDRPFESSGDNNTSVEKRK 117
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIKYF 61
+ V+++P VT + L DFFSQ + A ++ K S+ F F+ F TE++A EA+
Sbjct: 16 LFVRSIPLEVTNEELADFFSQDFPVKHAVVVTNAATKESKGFGFVSFTTEEDAAEALLKC 75
Query: 62 NKSYLDTCRISCEIAR 77
K L + E A+
Sbjct: 76 RKQKLKGKILQIEFAK 91
>gi|261193242|ref|XP_002623027.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis
SLH14081]
gi|239589162|gb|EEQ71805.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis
SLH14081]
gi|327356849|gb|EGE85706.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis ATCC
18188]
Length = 744
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 74/133 (55%), Gaps = 10/133 (7%)
Query: 272 EDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
E G + D G+ ++SS QQ+ LFVR+LP +AT + L E+FS+ + +V
Sbjct: 26 EQQTGTVAD-GDAAASS---QQKTKSRRTLFVRSLPASATTESLTEYFSQSYPLKHATVV 81
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA--RHKKSSDKQELHNS 389
+D TK+SKG +V +A E A++A+E + S+F G+ L + A RH++ +K
Sbjct: 82 LDPQTKQSKGYGFVTFADHEDAAKALEEFNGSVFDGKKLKIEVAEPRHREIDEK----GG 137
Query: 390 TSQGTKTLKQRRE 402
S T LKQ RE
Sbjct: 138 KSVSTSNLKQERE 150
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 277 EIVDPGNPSSSSKDVQQE------VLESGRLFVRNLPYTATE-DELREHFSKFGNVSEVH 329
EI + G S S+ +++QE + +L +RNLP++ E D+L F FG V H
Sbjct: 131 EIDEKGGKSVSTSNLKQERENRKLQAQPPKLIIRNLPWSIAEPDQLAALFRSFGKVK--H 188
Query: 330 IVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
V+ K + G +V+ ++A +A+E ++ GR L V
Sbjct: 189 AVIPKRGTQHSGFGFVVLRGRKNAEKALEAVNGKEIDGRTLAV 231
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAK-LMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+ V++LP T + L ++FSQ + A ++ + +S+ + F+ F ++A +A++ F
Sbjct: 51 LFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADHEDAAKALEEF 110
Query: 62 NKSYLDTCRISCEIA 76
N S D ++ E+A
Sbjct: 111 NGSVFDGKKLKIEVA 125
>gi|258405873|ref|YP_003198615.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
gi|257798100|gb|ACV69037.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
Length = 87
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP+++TEDE+R+ F+++G V V ++ D+DT R +G +V A +AIE L
Sbjct: 4 IYVGNLPFSSTEDEVRDLFAQYGEVQSVKLISDRDTGRPRGFGFVEME-DGGADKAIEAL 62
Query: 361 DNSIFQGRLLHVMPARHKK 379
D + F GR L V AR +K
Sbjct: 63 DGTTFGGRSLRVNEARERK 81
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFI 46
I V NLP TED +RD F+Q GE+ KL+ +D G+ R F F+
Sbjct: 4 IYVGNLPFSSTEDEVRDLFAQYGEVQSVKLISDRDTGRPRGFGFV 48
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 186/432 (43%), Gaps = 85/432 (19%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + T+ +L ++F++ V V + D T S G YV Y+ + A +A++ L
Sbjct: 48 LYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQKL 107
Query: 361 DNSIFQGRLLHVMPARHK-----------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ S G+++ + + KS D + LH + S G T+
Sbjct: 108 NYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFS-GCGTIV----S 162
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIA 463
+ A++ G ++ + F++ DT E+ A K+ + K L + ND + +
Sbjct: 163 CKVATDHMGQSRGYG--FVQFDT--EDSA-KNAIEK--LNGKVLNDKQIFV--------- 206
Query: 464 ETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDK 523
G + E SA D +K +N VKNL +++ EL FG++GS+
Sbjct: 207 ---------GPFLRKEERESA--ADKMKFTN--VYVKNLSEATTDDELKTTFGQYGSISS 253
Query: 524 VIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKG 578
++ ++ V F P +AA A + L K++ EW K
Sbjct: 254 AVVMRDGDGKSRCFGFVNFENPEDAARAVEALNGKKFDDK----EW---------YVGKA 300
Query: 579 NQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGE 638
+K+ + + L + +G +D ++ + +L+VKNL+ DE LR+ F E
Sbjct: 301 QKKS-------ERELELSRRYEQGSSDGG---NKFDGLNLYVKNLDDTVTDEKLRELFAE 350
Query: 639 HIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
G I S KV +++ S G GF+ F + A+ V ++ G ++ G L + L
Sbjct: 351 F---GTITSCKV---MRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQ 404
Query: 699 AKKDEQVVKKAE 710
K++ + +A+
Sbjct: 405 RKEERRAKLQAQ 416
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + T+D L+ F Q G I+ A +MR DGKSR F F+ F ++A A++
Sbjct: 225 TNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEA 284
Query: 61 FNKSYLD 67
N D
Sbjct: 285 LNGKKFD 291
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL VT+++LR+ F++ G IT K+MR G S+ F+ F EA + N
Sbjct: 330 LYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMN 389
Query: 63 KSYLDTCRISCEIARK 78
+ + +A++
Sbjct: 390 GKMVGGKPLYVALAQR 405
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL K V L + FS G I K+ G+SR + F+ F TE A+ AI+ N
Sbjct: 136 LFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLN 195
Query: 63 KSYLDTCRI 71
L+ +I
Sbjct: 196 GKVLNDKQI 204
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G LFV+NL + L E FS G + + D +S+G +V + +SA AIE
Sbjct: 134 GNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDH-MGQSRGYGFVQFDTEDSAKNAIE 192
Query: 359 VLDNSIFQGRLLHVMPARHKK----SSDKQELHN 388
L+ + + + V P K+ ++DK + N
Sbjct: 193 KLNGKVLNDKQIFVGPFLRKEERESAADKMKFTN 226
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 16/108 (14%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK-HLKNGKNVSMGFGFIEFDSVETA 675
+LFVKNL+ ++ L + F G I+S KV H+ S G+GF++FD+ ++A
Sbjct: 135 NLFVKNLDKSVDNKTLHEAFSGC---GTIVSCKVATDHMGQ----SRGYGFVQFDTEDSA 187
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
N L G +L+ + + ++K E++ ++ K+ NV
Sbjct: 188 KNAIEKLNGKVLNDKQIFV--------GPFLRKEERESAADKMKFTNV 227
>gi|388852088|emb|CCF54264.1| related to Nucleolar protein NOP4 [Ustilago hordei]
Length = 1057
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LF+ LPYTAT +L+ FS+ G + +V D++TK+SKG+ YV +AIPE A+ A+E L
Sbjct: 52 LFISRLPYTATTTDLQTMFSEIGPLKRAFVVTDQETKKSKGVGYVTFAIPEDANTALEQL 111
Query: 361 DNSIFQG 367
S G
Sbjct: 112 QGSSLDG 118
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 36/165 (21%)
Query: 193 ATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHNGD 252
A ++ + A E + +D+ S KKDW + A + + +DD ++ ++ EN +GD
Sbjct: 520 ALDRVREQAQPERVVAVDWALS--KKDW------EAKADESEPEDDAKDNDKAENGASGD 571
Query: 253 SNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATE 312
N + P+ K E E LFVRNLPY ATE
Sbjct: 572 ENND--------------------------EPAERPKLPAPE--EGTTLFVRNLPYQATE 603
Query: 313 DELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ELR F FG + I +DK T RSKG +V + +SA A+
Sbjct: 604 EELRNLFRTFGPLRYAKITMDKTTNRSKGTGFVCFWQADSAEAAL 648
>gi|405123946|gb|AFR98709.1| nucleolar protein 4 [Cryptococcus neoformans var. grubii H99]
Length = 994
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 141/338 (41%), Gaps = 76/338 (22%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFV +LPYTAT +L HFS G V + D+++ +SKG+ YV +++ E A RAI+ L
Sbjct: 26 LFVSSLPYTATTTDLLTHFSYIGPVRHGFVATDRESGKSKGVGYVTFSLKEDADRAIQEL 85
Query: 361 DNSIFQG--RLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT---- 414
D F G R + V A + S LK R+ E + + G T
Sbjct: 86 DGGSFGGGNRKIQVKWADERAS----------------LKDRKAEVKVSKPIPGQTDNKS 129
Query: 415 ---KAWNSLFMR--PDTVVENIARKHGVS---KSDLL---------DREANDLAVRIALG 457
KA +L + P + +N+ K K++LL + D A I
Sbjct: 130 TDPKAIQTLVLTGLPSDITKNVLWKKIRKVNDKAELLFPVEAEGSEEEAPKDTAHIIFPS 189
Query: 458 ETQVI-------AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHV--FLVKNLPYDSSE 508
+ + T K + V LE+ SA K +G K +H +++NL +D++
Sbjct: 190 HSDALKALPKLHGHTYKGSILSCVLKKRLEKLSA-KGEG-KAPSHAGRLIIRNLSWDTTV 247
Query: 509 GELAKMFGKFGSLDKVILPS-------------------TKTLALVVFLEPVEAAAAFKG 549
+L K F +G + + LP+ + A V FL +A A +G
Sbjct: 248 QDLRKAFLPYGPIHSIDLPTLPSKLPPSSDPTKPPPPPRARGFAFVWFLARHDAEKAIEG 307
Query: 550 LAYKRYK------GVPLYLEWAPSDVLSQSSTSKGNQK 581
+ K K G + ++WA S Q +T KG +K
Sbjct: 308 INGKPIKKGLDGEGRVVAVDWALSKEKWQEAT-KGEEK 344
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 73/172 (42%), Gaps = 29/172 (16%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY--------AIPES 352
LF+RNLP+ TE EL F FG + I +DK T RS+G +V + I E+
Sbjct: 420 LFIRNLPFETTELELNALFRSFGPLRYAKITIDKATGRSRGTGFVCFWKNEHADEVIEEA 479
Query: 353 ASRAIEVLDNSIFQG-----------RLLHVMPARHKKSSDKQELHNSTSQGTK-----T 396
A+E NSI G LL P+ S + LH T T+ T
Sbjct: 480 QRVAMETGANSIPLGGAVPKNPFALPSLLTADPSSSLAS--RLVLHGRTLDITRAVTRET 537
Query: 397 LKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN 448
Q +E+ + A+ N+ MR + N G+ +S++ R+A+
Sbjct: 538 ASQMKEDTERLRNAADKR---NTYLMREGVIFPNSPAAEGLPESEIEKRQAS 586
>gi|149244358|ref|XP_001526722.1| polyadenylate-binding protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|158514320|sp|A5DW14.1|PABP_LODEL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|146449116|gb|EDK43372.1| polyadenylate-binding protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 661
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 186/449 (41%), Gaps = 84/449 (18%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L + E L E FS G V+ + + D +K+S G AYV Y E +AI
Sbjct: 66 SASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKKSLGYAYVNYHKLEDGEKAI 125
Query: 358 EVLDNSIFQGRLLHVMPARHKKSS-----------------DKQELHNSTSQGTKTLKQR 400
E L+ + +GR +M ++ S+ D + LH++ S K L
Sbjct: 126 EELNYTPVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSV- 184
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
+ A++ G +K + F+ +T A V+ L DRE + +G+
Sbjct: 185 ----KVATDDLGQSKCFG--FVHYETEEAAQAAIESVNGMLLNDRE-------VYVGK-H 230
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
V + ++ S LEE A T+ VKN+ +E E ++F FG
Sbjct: 231 VSKKDRE---------SKLEEMKANYTN--------IYVKNIDLAYTEKEFEELFAPFGK 273
Query: 521 LDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
+ + L +K V F E AA A + L K G +Y+ A
Sbjct: 274 ITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRA---------- 323
Query: 576 SKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKH 635
K ++ + + +++A R + +GV +LFVKNL+ + E L +
Sbjct: 324 QKKRERTEELKKQYEAVRLEKLSKYQGV-------------NLFVKNLDEQIDSEKLEEE 370
Query: 636 FGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
F G I S KV + + S GFGF+ F + E AT ++ +++G L +
Sbjct: 371 FKPF---GTITSSKV---MVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMVNGKPLYVA 424
Query: 696 LCHAKKDEQVVKKAEKDKSSTKLLVRNVA 724
L +KD + + ++ ++ ++ ++N A
Sbjct: 425 LAQ-RKDVRRSQLEQQIQARNQMRMQNAA 452
Score = 45.4 bits (106), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + + ++L + F G IT +K+M GKS+ F F+ F T +EA +AI N
Sbjct: 353 LFVKNLDEQIDSEKLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEMN 412
Query: 63 KSYLDTCRISCEIARK 78
+ ++ + +A++
Sbjct: 413 QRMVNGKPLYVALAQR 428
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I VKN+ TE + F+ G+IT L + +GKS+ F F+ F + A +A++
Sbjct: 248 TNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEE 307
Query: 61 FNKSYLDTCRISCEIARK 78
N ++ +I A+K
Sbjct: 308 LNDKEINGQKIYVGRAQK 325
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + L D FS G+I K+ G+S+ F F+ + TE+ A+ AI+ N
Sbjct: 157 IFIKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESVN 216
Query: 63 KSYLD 67
L+
Sbjct: 217 GMLLN 221
>gi|390597906|gb|EIN07305.1| polyadenylate binding protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 668
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 168/406 (41%), Gaps = 49/406 (12%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L T +E L E F+ G V+ + + D T+RS G AYV Y RA+
Sbjct: 51 SASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYFNAADGERAL 110
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
E L+ S+ +GR +M S + T QG +K ++ ++A +T A
Sbjct: 111 EQLNYSLIKGRACRIM------WSQRDPALRKTGQGNIFIKNL--DDAIDNKALHDTFAA 162
Query: 418 NSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVS 477
+ + + R G EA + A++ G ++ KK G +VS
Sbjct: 163 FGNVLSCKVATDEMGRSKGYGFVHYETNEAAESAIKAVNG---MLLNDKKVYV--GHHVS 217
Query: 478 SLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTL 532
+ K D K+ VKN+ ++++ E ++F FG++ +L ++
Sbjct: 218 KKDR--QAKLDEQKKQFTNVYVKNIDPEANDDEFRELFTPFGNVTSAVLQRDEEGRSRGF 275
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
V F EA A L +KG L++ S+ +K++ E + +
Sbjct: 276 GFVNFETHEEAQKAVDTLHDSDFKGRKLFV-------------SRAQKKSER---EEELR 319
Query: 593 RALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK 652
R+ + ++E ++ + + +L++KNL DE LR F G I S KV
Sbjct: 320 RSYEQAKMEKMS-------KYQGVNLYIKNLEDDVDDEKLRDAFEPF---GAITSAKV-- 367
Query: 653 HLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
++ S GFGF+ F S + AT ++ ++ L + L
Sbjct: 368 -MRTEGGTSKGFGFVCFSSPDEATKAVAEMNNKMMGSKPLYVSLAQ 412
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL V +++LRD F G IT AK+MRT+ G S+ F F+ F + EA +A+ N
Sbjct: 338 LYIKNLEDDVDDEKLRDAFEPFGAITSAKVMRTEGGTSKGFGFVCFSSPDEATKAVAEMN 397
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 398 NKMMGSKPLYVSLAQR 413
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ + VKN+ +D R+ F+ G +T A L R ++G+SR F F+ F T +EA++A+
Sbjct: 233 TNVYVKNIDPEANDDEFRELFTPFGNVTSAVLQRDEEGRSRGFGFVNFETHEEAQKAV 290
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
++F+KNL+ ++ L F G +LS KV + G+ S G+GF+ +++ E A
Sbjct: 141 NIFIKNLDDAIDNKALHDTFAAF---GNVLSCKVATD-EMGR--SKGYGFVHYETNEAAE 194
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
+ + + G +L+ + + +KKD Q K E+ K T + V+N+ EA
Sbjct: 195 SAIKAVNGMLLNDKKVYVGHHVSKKDRQ-AKLDEQKKQFTNVYVKNIDPEA 244
>gi|254568410|ref|XP_002491315.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|238031112|emb|CAY69035.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|328352168|emb|CCA38567.1| Embryonic polyadenylate-binding protein 2 [Komagataella pastoris
CBS 7435]
Length = 209
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
++S ++V N+ ++AT EL EHF G V+ V I++DK T R KG AYV ++ P S S
Sbjct: 85 IDSKSIYVGNVDFSATPGELAEHFKTCGTVNRVTILMDKVTGRPKGFAYVEFSDPSSVSE 144
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
++ VL++S F GR L V+P R
Sbjct: 145 SL-VLNDSEFHGRNLKVVPKR 164
>gi|414883567|tpg|DAA59581.1| TPA: hypothetical protein ZEAMMB73_267259 [Zea mays]
Length = 385
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ GRLFV NLPYT T +EL + FS+ G V + I+ DK T RS+G A+V A E A++A
Sbjct: 110 DPGRLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKA 169
Query: 357 IEVLDNSI 364
I++ D ++
Sbjct: 170 IQMFDGAV 177
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKY 60
R+ V NLP T + L FS+ G + DA+++ K +SR FAF+ T +EA +AI+
Sbjct: 113 RLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQM 172
Query: 61 FNKS 64
F+ +
Sbjct: 173 FDGA 176
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+++ NL + D LR F + + ++ +++T RS+G +V ++ E A A+E
Sbjct: 256 KIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALES 315
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNS 419
LD +GR L + A E + T + ++EE + A G T+A +S
Sbjct: 316 LDGVELEGRSLRLSLA---------EQNPPPGSPPSTAQAQQEETDSGAPAGGGTEAASS 366
>gi|326469986|gb|EGD93995.1| ribosome biogenesis protein Nop4 [Trichophyton tonsurans CBS
112818]
Length = 739
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 161/368 (43%), Gaps = 49/368 (13%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+ V++LP T + L ++FSQ + A + + + +S+ + F+ F ++A+ A K
Sbjct: 32 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAKEL 91
Query: 62 NKSYLDTCRISCEIA----RKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKT 117
N S + +I E+A R++ D + + K KE+ E + L K +
Sbjct: 92 NNSVFEGKKIKIELAEPRHREI-DEKEGKSVPSSAPSKAKELKEKRRLESLPPKLIIRNL 150
Query: 118 IEKVTENDDPQLLEFLQVMQPRVK----SKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
+TE PQ LE L ++K K + G + + K +E + + G E
Sbjct: 151 PWSITE---PQHLELLFRSYGKIKHAVVPKKGSRVAGFGFVVMRGRKNAERAIEGVNGKE 207
Query: 174 KSITLHVKSDKSNVITDSQATEKSK----NAAADELMSDMDYFKSRVKKDWSDSESEDDS 229
D + D A EK + N AA+E SD ++ +++E D
Sbjct: 208 --------VDGRTLAVD-WAVEKDEWENMNKAAEE--SDGKEEAGESEEAAAENEHLD-- 254
Query: 230 AGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSK 289
DD + D E+EE D E D+ ED +G I +
Sbjct: 255 VVDDGESDAISEDEE-------DGGVELDN------------EDEDGNISMGDAEDDELE 295
Query: 290 DVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAI 349
+ +++ + +F+RNLP++AT++ L EHFSKFG V +V+D T+R KG A+V +
Sbjct: 296 EEEEDDRNASTIFIRNLPFSATDEALHEHFSKFGPVRYARVVLDPATERPKGTAFVCFYK 355
Query: 350 PESASRAI 357
E AS I
Sbjct: 356 AEDASSCI 363
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFVR+LP TAT + L E+FS+ + +V+D TK+SKG +V + E A A + L
Sbjct: 32 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAKEL 91
Query: 361 DNSIFQGRLLHVMPA--RHKKSSDKQ--ELHNSTSQGTKTLKQRREEE 404
+NS+F+G+ + + A RH++ +K+ + +S K LK++R E
Sbjct: 92 NNSVFEGKKIKIELAEPRHREIDEKEGKSVPSSAPSKAKELKEKRRLE 139
>gi|297816516|ref|XP_002876141.1| RNA-binding protein cp33 [Arabidopsis lyrata subsp. lyrata]
gi|297321979|gb|EFH52400.1| RNA-binding protein cp33 [Arabidopsis lyrata subsp. lyrata]
Length = 330
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 48/84 (57%)
Query: 289 KDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYA 348
K Q E GRL+V NLPYT T EL + F + GNV +V IV DK T RS+G +V
Sbjct: 107 KQTTQASGEEGRLYVGNLPYTITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMG 166
Query: 349 IPESASRAIEVLDNSIFQGRLLHV 372
E A AI++ ++S GR + V
Sbjct: 167 TIEEAKEAIQMFNSSQIGGRTVKV 190
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKY 60
R+ V NLP +T L F + G + D +++ K +SR F F+ T +EA+EAI+
Sbjct: 118 RLYVGNLPYTITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQM 177
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSR 90
FN S + + KV P +PR R
Sbjct: 178 FNSSQIGGRTV------KVNLPEVPRGGER 201
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 86/227 (37%), Gaps = 36/227 (15%)
Query: 497 FLVKNLPYDSSEGELAKMFGKFGSLDKV------ILPSTKTLALVVFLEPVEAAAAFKGL 550
V NLPY + EL+++FG+ G++ V + ++ V EA A +
Sbjct: 119 LYVGNLPYTITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMF 178
Query: 551 AYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDP 610
+ G T K N GE + R + D+ P
Sbjct: 179 NSSQIGG----------------RTVKVNLPEVPRGGEREVMRTKIRDNNRSYVDS---P 219
Query: 611 DRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFD 670
++ + NL + + L+ FG+ +L KV G+ S GFGFI F+
Sbjct: 220 HKI-----YAGNLGWNLTSQGLKDAFGDQPG---VLGAKVIYERNTGR--SRGFGFISFE 269
Query: 671 SVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTK 717
S E + + G ++G AL L L ++++ V ++ TK
Sbjct: 270 SAEDVQSALATMNGVEVEGRALRLNLA-SERERPTVSPPSVEEGETK 315
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 177/428 (41%), Gaps = 60/428 (14%)
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
NPS+ S + L+V +L TE L E FS G + + + D T+RS G
Sbjct: 2 NPSAPSYPM-------ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGY 54
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRRE 402
AYV + P A RA++ ++ + +G+ + +M ++ S LH S G + +
Sbjct: 55 AYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPS-----LHKS---GVGNIFIKNL 106
Query: 403 EERKASEASGNT-KAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQV 461
++ ++A +T A+ ++ EN ++ +G + E + A R +
Sbjct: 107 DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYG-----FVHFETQEAAERAIEKMNGM 161
Query: 462 IAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSL 521
+ +K S +E A K +V+ +KN D + L +FGKFG
Sbjct: 162 LLNDRKVFVG---RFKSRKEREAELGARAKEFTNVY-IKNFGEDMDDERLKDLFGKFGPA 217
Query: 522 DKVILPS-----TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTS 576
V + + +K V F +A A + K G +Y+ A V Q+
Sbjct: 218 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQT--- 274
Query: 577 KGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHF 636
+ KR + + + +T R + +L+VKNL+ DE LRK F
Sbjct: 275 -------------ELKRKFEQMKQDRIT-------RYQGVNLYVKNLDDGIDDERLRKEF 314
Query: 637 GEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQL 696
G I S KV ++ G+ S GFGF+ F S E AT ++ G I+ L + L
Sbjct: 315 SPF---GTITSAKV--MMEGGR--SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVAL 367
Query: 697 CHAKKDEQ 704
K++ Q
Sbjct: 368 AQRKEERQ 375
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ++RLR FS G IT AK+M + G+S+ F F+ F + +EA +A+ N
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVM-MEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 63 KSYLDTCRISCEIARK 78
+ T + +A++
Sbjct: 355 GRIVATKPLYVALAQR 370
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KN + + ++RL+D F + G K+M + GKS+ F F+ F ++A++A+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 61 FNKSYLDTCRISCEIARK 78
N L+ +I A+K
Sbjct: 251 MNGKELNGKQIYVGRAQK 268
>gi|19114289|ref|NP_593377.1| mRNA export shuttling protein [Schizosaccharomyces pombe 972h-]
gi|3123239|sp|P31209.2|PABP_SCHPO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|2104439|emb|CAB08762.1| mRNA export shuttling protein [Schizosaccharomyces pombe]
Length = 653
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 176/427 (41%), Gaps = 85/427 (19%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L + TE L E F+ G V+ + + D T+RS G AYV + E +A+
Sbjct: 79 SASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKAL 138
Query: 358 EVLDNSIFQGRLLHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQR 400
+ L+ ++ +GR +M P+ K + D + LH++ S K L
Sbjct: 139 DELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSC- 197
Query: 401 REEERKASEASGNTKAWNSLFMRPDTV-VENIARKHGVSKSDLLDREANDLAVRIALGET 459
+ A + GN K + F+ D+V N A +H LL ND V +
Sbjct: 198 ----KVAVDELGNAKGYG--FVHFDSVESANAAIEH--VNGMLL----NDKKVYV----- 240
Query: 460 QVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG 519
G +VS E S K + LK + +KNL + +E E + +FG+FG
Sbjct: 241 -------------GHHVSRRERQS--KVEALKANFTNVYIKNLDTEITEQEFSDLFGQFG 285
Query: 520 SLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
+ + L + V + A A L K YKG LY+
Sbjct: 286 EITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYV------------ 333
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRK 634
+ +K++ E + ++ + +LE + ++ + +LF+KNL + DE L+
Sbjct: 334 -GRAQKKHER---EEELRKRYEQMKLEKM-------NKYQGVNLFIKNLQDEVDDERLKA 382
Query: 635 HFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALIL 694
F G I S K+ + + + S GFGF+ + + E A ++ +L G L +
Sbjct: 383 EFSAF---GTITSAKI---MTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYV 436
Query: 695 QLCHAKK 701
L K+
Sbjct: 437 ALAQRKE 443
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL V ++RL+ FS G IT AK+M + GKS+ F F+ + T +EA +A+ N
Sbjct: 366 LFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMN 425
Query: 63 KSYLDTCRISCEIARK 78
+ L + +A++
Sbjct: 426 QRMLAGKPLYVALAQR 441
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KNL +TE D F Q GEIT L++ ++ K R F F+ + + A++A+
Sbjct: 261 TNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDE 320
Query: 61 FN 62
N
Sbjct: 321 LN 322
>gi|321265754|ref|XP_003197593.1| hypothetical protein CGB_N3080W [Cryptococcus gattii WM276]
gi|317464073|gb|ADV25806.1| Hypothetical protein CGB_N3080W [Cryptococcus gattii WM276]
Length = 988
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 140/337 (41%), Gaps = 86/337 (25%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFV +LPYTAT +L HFS G V + D+++ +SKG+ YV +++ E A RAI+ L
Sbjct: 26 LFVSSLPYTATTTDLLTHFSYIGPVRHGFVATDRESGKSKGVGYVTFSLKEDADRAIQEL 85
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT------ 414
D F G K+++ + +LK R+ E + + G T
Sbjct: 86 DGGSFGG--------------GKRKIQVKWADERASLKDRKAEIKVSKPIPGQTDSKSTD 131
Query: 415 -KAWNSLFMR--PDTVVENIARKHGVSKSDLLDREANDLA-----VRIALGE------TQ 460
KA +L + P + +N+ K R+ N+ A V GE
Sbjct: 132 PKAIQTLVLTGLPSDITKNVLWKK--------IRKVNEKAELVFPVEAEEGEEAPKDTAH 183
Query: 461 VIAETK----KAL------TNAGVNVSS-----LEEFSAGKTDGLKRSNHV--FLVKNLP 503
+I T KAL T G +S LE+ SA K +G K +H +++NL
Sbjct: 184 IIFPTHGDALKALPKLHGHTYKGCILSCVLKKRLEKLSA-KGEG-KAPSHAGRLIIRNLS 241
Query: 504 YDSSEGELAKMFGKFGSLDKVILPS-------------------TKTLALVVFLEPVEAA 544
+D++ +L K F +G + + LP+ + A V FL +A
Sbjct: 242 WDTTVQDLRKAFLPYGPIHSIDLPTLPSKLPPSSDPTKPPPPPRARGFAFVWFLTRHDAE 301
Query: 545 AAFKGLAYKRYKGVP------LYLEWAPSDVLSQSST 575
A +G+ K K P + ++WA S Q +T
Sbjct: 302 KAIEGINGKPIKKGPDGEGRVVAVDWALSKEKWQEAT 338
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 73/172 (42%), Gaps = 29/172 (16%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY--------AIPES 352
LF+RNLP+ TE EL F FG + I +DK T RS+G +V + I E+
Sbjct: 426 LFIRNLPFETTELELNTLFRSFGPLRYAKITIDKATGRSRGTGFVCFWKNEHADEVIEEA 485
Query: 353 ASRAIEVLDNSIFQG-----------RLLHVMPARHKKSSDKQELHNSTSQGTK-----T 396
A+E NSI G LL P+ S + LH T T+ T
Sbjct: 486 QRVAMETGANSIPLGGAAPKNPFALPSLLTADPSSSLAS--RLVLHGRTLDITRAVTRET 543
Query: 397 LKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN 448
Q +E+ + A+ N+ MR + N G+ +S++ R+A+
Sbjct: 544 ASQMKEDTERLRNAADKR---NTYLMREGVIFPNSPAAEGLPESEIEKRQAS 592
>gi|336386223|gb|EGO27369.1| hypothetical protein SERLADRAFT_446592 [Serpula lacrymans var.
lacrymans S7.9]
Length = 338
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 231 GDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKD 290
G D DDGEE E +E EE + K E ANG G + S
Sbjct: 14 GADPMLDDGEEAESKEIQLMKQRVEEMEREAKKLRELQAAAETANG-----GTSTESDSG 68
Query: 291 VQQEVLE------SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAY 344
V E E S +FV N+ Y AT +E++ HF G ++ V I+ DK T KG AY
Sbjct: 69 VPMETEEEKALSDSRSVFVGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAY 128
Query: 345 VLYAIPESASRAIEVLDNSIFQGRLL 370
V +A P+ A+ +DNS+F+GRL+
Sbjct: 129 VEFAEPDFIDAAL-AMDNSLFRGRLI 153
>gi|336373392|gb|EGO01730.1| hypothetical protein SERLA73DRAFT_70899 [Serpula lacrymans var.
lacrymans S7.3]
Length = 346
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 231 GDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKD 290
G D DDGEE E +E EE + K E ANG G + S
Sbjct: 14 GADPMLDDGEEAESKEIQLMKQRVEEMEREAKKLRELQAAAETANG-----GTSTESDSG 68
Query: 291 VQQEVLE------SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAY 344
V E E S +FV N+ Y AT +E++ HF G ++ V I+ DK T KG AY
Sbjct: 69 VPMETEEEKALSDSRSVFVGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAY 128
Query: 345 VLYAIPESASRAIEVLDNSIFQGRLLHV 372
V +A P+ A+ +DNS+F+GRL+ V
Sbjct: 129 VEFAEPDFIDAAL-AMDNSLFRGRLIKV 155
>gi|297804134|ref|XP_002869951.1| hypothetical protein ARALYDRAFT_492869 [Arabidopsis lyrata subsp.
lyrata]
gi|297315787|gb|EFH46210.1| hypothetical protein ARALYDRAFT_492869 [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 69.7 bits (169), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ ++ VRNLP++ +ED L+ FS FG ++EV ++ D+ KRSKG A++ + + A AI
Sbjct: 39 ASKIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIRDESMKRSKGYAFIQFTSQDDAFLAI 98
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKT 396
E +D ++ GR++++ A+ K D Q L ++ KT
Sbjct: 99 ETMDRRMYNGRMIYIDIAKPGK-RDFQGLPRTSGPPEKT 136
Score = 46.6 bits (109), Expect = 0.054, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIK 59
S+I V+NLP +ED L+ FS GEI + KL+R + K S+ +AFI F ++ +A AI+
Sbjct: 40 SKIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIRDESMKRSKGYAFIQFTSQDDAFLAIE 99
Query: 60 YFNKSYLDTCRISCEIAR 77
++ + I +IA+
Sbjct: 100 TMDRRMYNGRMIYIDIAK 117
>gi|225458678|ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera]
Length = 640
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 190/439 (43%), Gaps = 87/439 (19%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
V + L+V +L T+ +L + F + G V V + D T+RS G YV Y+ P+ A+
Sbjct: 14 VANTASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAA 73
Query: 355 RAIEVLDNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTL 397
RA+++L+ + G+ + +M P+ K KS D + LH++ S L
Sbjct: 74 RALDLLNFTPLNGKPIRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNIL 133
Query: 398 KQRREEERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIAL 456
+ A++ SG +K + + F ++ I + +G+ +D ++ +
Sbjct: 134 SC-----KIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGMLIND----------KQVYV 178
Query: 457 GETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFG 516
G+ E + AL + N+V+ VKNL ++E +L +FG
Sbjct: 179 GQFLRKQERETALNKT-------------------KFNNVY-VKNLSESTTEEDLKNIFG 218
Query: 517 KFGSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS 571
+FG + V++ +K V F +AA A + L K++ EW
Sbjct: 219 EFGIITSVVVMRDGDGKSKCFGFVNFENADDAAEAVEALNGKKFD----EKEW------- 267
Query: 572 QSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDEN 631
K +K + E + K EQ ++ V D+ + +L++KNL+ D+
Sbjct: 268 --YVGKAQKKYER---ELELK-GRFEQSMKEVV------DKFQGVNLYIKNLDDSIGDDK 315
Query: 632 LRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHA 691
L++ F E G I S KV +++ +S G GF+ F + E A+ ++ G ++
Sbjct: 316 LKELFSEF---GTITSCKV---MRDPSGISRGSGFVAFSTSEEASRALTEMNGKMVVSKP 369
Query: 692 LILQLCHAKKDEQVVKKAE 710
L + L K++ + +A+
Sbjct: 370 LYVALAQRKEERRARLQAQ 388
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + +D+L++ FS+ G IT K+MR G SR F+ F T +EA A+ N
Sbjct: 302 LYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMN 361
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 362 GKMVVSKPLYVALAQR 377
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGF 48
+ VKNL + TE+ L++ F + G IT +MR DGKS+ F F+ F
Sbjct: 199 VYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNF 244
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I +KNL K + L D FS G I K+ G+S+ + F+ F E+ A+ AI
Sbjct: 106 ANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDK 165
Query: 61 FN 62
N
Sbjct: 166 LN 167
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 178/433 (41%), Gaps = 87/433 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + + +L + FS+ G V V + D ++++S G AYV Y A+RA+E+L
Sbjct: 37 LYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALELL 96
Query: 361 DNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ + G+ + +M P+ K KS D + L+++ L +
Sbjct: 97 NFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSCK--- 153
Query: 404 ERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI 462
A++ SG ++ + + F + ++ I + +G+ +D
Sbjct: 154 --IATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLIND--------------------- 190
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
KK V E S+ +K SN VKNL ++ EL +MFGK+G++
Sbjct: 191 ---KKVFVGPFVRKQDRENVSSN----IKFSN--VYVKNLSDTVTDDELKEMFGKYGTIT 241
Query: 523 KVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
++ ++ V F AA A + L K + LY+ A + +
Sbjct: 242 SAVVMRDSDGKSRCFGFVNFENADAAAQAVQELNGKIFNDKELYVGRAQKKSEREMELKE 301
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
+KN V E + ++ +L++KNL DE LR+ F
Sbjct: 302 KFEKNVQEVAE-----------------------KFQNTNLYLKNLEENIDDEKLRELFA 338
Query: 638 EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
E+ G I S KV +++ VS G GF+ F S E A ++ G ++ L + L
Sbjct: 339 EY---GNITSCKV---MRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVALA 392
Query: 698 HAKKDEQVVKKAE 710
K+D + +A+
Sbjct: 393 QRKEDRKAKLQAQ 405
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S + VKNL VT+D L++ F + G IT A +MR DGKSR F F+ F A +A++
Sbjct: 214 SNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQE 273
Query: 61 FN 62
N
Sbjct: 274 LN 275
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 46/78 (58%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KNL + + +++LR+ F++ G IT K+MR +G SR F+ F++ ++A A+
Sbjct: 317 TNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTE 376
Query: 61 FNKSYLDTCRISCEIARK 78
N + + + +A++
Sbjct: 377 MNGKMVGSKPLYVALAQR 394
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 289 KDVQQ--EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
K+VQ+ E ++ L+++NL +++LRE F+++GN++ ++ D + S+G +V
Sbjct: 305 KNVQEVAEKFQNTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGV-SRGSGFVA 363
Query: 347 YAIPESASRAIEVLDNSIFQGRLLHVMPARHKK 379
+ E A+RA+ ++ + + L+V A+ K+
Sbjct: 364 FKSAEDANRALTEMNGKMVGSKPLYVALAQRKE 396
>gi|386749770|ref|YP_006222977.1| RNA-binding protein [Helicobacter cetorum MIT 00-7128]
gi|384556013|gb|AFI04347.1| RNA-binding protein [Helicobacter cetorum MIT 00-7128]
Length = 82
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+AT +E++E FSKFG V V ++ D++TKR KG +V +SA++AI L
Sbjct: 4 IYVGNLVYSATNEEVKELFSKFGEVFSVKLICDRETKRPKGFGFVEMQ-GDSANQAISEL 62
Query: 361 DNSIFQGRLLHVMPARHKKS 380
DN+ F GR + V A +KS
Sbjct: 63 DNTDFMGRTIRVTEANPRKS 82
>gi|363543257|ref|NP_001241843.1| uncharacterized protein LOC100857047 [Zea mays]
gi|238007748|gb|ACR34909.1| unknown [Zea mays]
gi|413916459|gb|AFW56391.1| putative glycine-rich protein [Zea mays]
Length = 261
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 283 NPSSSSKDVQQEV--LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
N +SS+ V Q + + S +LFV L Y + LR+ F+K+G V E I++D+++ RS+
Sbjct: 13 NATSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSR 72
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHK 378
G ++ Y E AS AI +D GR + V A +
Sbjct: 73 GFGFITYTSSEEASAAITAMDGKTLDGRNIRVNHANER 110
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ S LFV L++ T D +LR F K G+++ K+ ++G+ S GFGFI + S
Sbjct: 28 MSSSKLFVGGLSYGTDDHSLRDEF---AKYGQVIEAKIILDRESGR--SRGFGFITYTSS 82
Query: 673 ETATNVCRDLQGTILDGHALILQLCHAKK 701
E A+ + G LDG +++ HA +
Sbjct: 83 EEASAAITAMDGKTLDGRN--IRVNHANE 109
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 1 SRICVKNLPKYVTEDR-LRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAI 58
S++ V L Y T+D LRD F++ G++ +AK++ ++ G+SR F FI + + +EA AI
Sbjct: 31 SKLFVGGL-SYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAI 89
Query: 59 KYFNKSYLDTCRI 71
+ LD I
Sbjct: 90 TAMDGKTLDGRNI 102
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES ++FV + ++ + LRE F+K+G V E ++VD++T RS+G +V Y E AS
Sbjct: 40 MESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASS 99
Query: 356 AIEVLDNSIFQGRLLHVMPA 375
AI+ LD GR + V A
Sbjct: 100 AIQALDGQDLHGRRVRVNYA 119
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ES +FV ++F T D++LR+ F K G ++ +V + G+ S GFGF+ + S
Sbjct: 40 MESSKVFVGGISFSTDDQSLREAF---TKYGEVIEARVIVDRETGR--SRGFGFVTYTSS 94
Query: 673 ETATNVCRDLQGTILDGHALILQLCH 698
E A++ + L G L G + + +
Sbjct: 95 EEASSAIQALDGQDLHGRRVRVNYAN 120
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 185/437 (42%), Gaps = 77/437 (17%)
Query: 284 PSSSSKDVQQEVLE--SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
P++++ + + +E + L+V L + +E L + FS G+VS + + D TK S G
Sbjct: 26 PATTAIEAESPNVENVTASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLG 85
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHKKSSDK---QELH----NS 389
AYV + E+ AIE L+ + +GR +M P+ KK S + LH N
Sbjct: 86 YAYVNFNDHEAGKTAIEKLNYTAIKGRPCRIMWSQRDPSMRKKGSGNIFIKNLHPDIDNK 145
Query: 390 TSQGTKTLKQRREEERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREAN 448
T T ++ + A++ +G +K + + F + E I +G+ LL+ +
Sbjct: 146 TLYETFSVFGNILSCKIANDETGKSKGFGFVHFENEEAAREAIDAINGM----LLNGQEV 201
Query: 449 DLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSE 508
+A ++ + Q S L+E A T+ VKNL +++E
Sbjct: 202 YVAPHVSKKDRQ----------------SKLDEARANFTN--------VYVKNLDLEATE 237
Query: 509 GELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLE 563
+ +F +G++ V L ++ V F +A A + L YKG LY+
Sbjct: 238 EDFENLFKPYGTITSVALEKDAEGKSRGFGFVDFENHEDAVKAVEALNDTEYKGQTLYV- 296
Query: 564 WAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNL 623
+ +K + + + K+ +LE + + + +LF+KNL
Sbjct: 297 ------------GRAQKKYERL---QELKKQYQASKLEKLA-------KYQGINLFIKNL 334
Query: 624 NFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQ 683
+ DE L++ F G I S +V + +NGK S GFGF+ F + E AT +
Sbjct: 335 DDSIDDEKLKEEFAPF---GTITSARVMR-TENGK--SKGFGFVCFSTPEEATRAITEKN 388
Query: 684 GTILDGHALILQLCHAK 700
I+ G L + + K
Sbjct: 389 QQIVAGKPLYVAIAQRK 405
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + +++L++ F+ G IT A++MRT++GKS+ F F+ F T +EA AI N
Sbjct: 329 LFIKNLDDSIDDEKLKEEFAPFGTITSARVMRTENGKSKGFGFVCFSTPEEATRAITEKN 388
Query: 63 KSYLDTCRISCEIARK 78
+ + + IA++
Sbjct: 389 QQIVAGKPLYVAIAQR 404
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S ++F+KNL+ ++ L + F G ILS K+ + GK S GFGF+ F++ E
Sbjct: 130 SGNIFIKNLHPDIDNKTLYETFSVF---GNILSCKIAND-ETGK--SKGFGFVHFENEEA 183
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
A + G +L+G + + +KKD Q K E + T + V+N+ EA
Sbjct: 184 AREAIDAINGMLLNGQEVYVAPHVSKKDRQ-SKLDEARANFTNVYVKNLDLEA 235
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL TE+ + F G IT L + +GKSR F F+ F ++A +A++
Sbjct: 224 TNVYVKNLDLEATEEDFENLFKPYGTITSVALEKDAEGKSRGFGFVDFENHEDAVKAVEA 283
Query: 61 FN 62
N
Sbjct: 284 LN 285
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 608 IDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFI 667
+D R +++VKNL+ + +E+ F + G I SV ++K + + S GFGF+
Sbjct: 216 LDEARANFTNVYVKNLDLEATEEDFENLFKPY---GTITSVALEK---DAEGKSRGFGFV 269
Query: 668 EFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKL 718
+F++ E A L T G L + A+K + +++ +K ++KL
Sbjct: 270 DFENHEDAVKAVEALNDTEYKGQTLY--VGRAQKKYERLQELKKQYQASKL 318
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + L + FS G I K+ + GKS+ F F+ F E+ A EAI N
Sbjct: 133 IFIKNLHPDIDNKTLYETFSVFGNILSCKIANDETGKSKGFGFVHFENEEAAREAIDAIN 192
Query: 63 KSYLD 67
L+
Sbjct: 193 GMLLN 197
>gi|406994417|gb|EKE13409.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 155
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RLFV LP+++T+DELR+ F+ GNV I+ D++T RSKG +V E AS AI
Sbjct: 25 RLFVAGLPFSSTQDELRDLFASVGNVVSTSIITDRETGRSKGFGFVEMETSEEASNAIAK 84
Query: 360 LDNSIFQGRLLHVMPAR 376
L+++ F GR L V A+
Sbjct: 85 LNDTDFGGRKLIVAEAK 101
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKY 60
R+ V LP T+D LRD F+ G + ++ ++ G+S+ F F+ T +EA AI
Sbjct: 25 RLFVAGLPFSSTQDELRDLFASVGNVVSTSIITDRETGRSKGFGFVEMETSEEASNAIAK 84
Query: 61 FN 62
N
Sbjct: 85 LN 86
>gi|169773975|ref|XP_001821456.1| ribosome biogenesis (Nop4) [Aspergillus oryzae RIB40]
gi|83769317|dbj|BAE59454.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391869076|gb|EIT78281.1| nucleolar protein fibrillarin NOP77 [Aspergillus oryzae 3.042]
Length = 726
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 157/367 (42%), Gaps = 54/367 (14%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIKYF 61
+ V++LP VT ++L ++FSQ I A ++ + K S+ + F+ F +A+ A+ F
Sbjct: 47 LFVRSLPASVTTEKLVEYFSQSYVIKHALVVNDSETKQSKGYGFVTFADVDDAKAALDEF 106
Query: 62 NKSYLDTCRISCEIAR---KVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTI 118
N S D +I + A+ + D N + + + K+ E E+ K +
Sbjct: 107 NGSVFDGKKIKVDYAQPRHRTVDENAGKSVPSSAALEAKKQREQERAATQPPKLIVRNLP 166
Query: 119 EKVTENDD-----PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
+ E DD + V P+ +K+ G + + K +E +A+ G E
Sbjct: 167 WSIKEPDDLAVHFRSFGKIKYVNLPKKGNKLAG----FGFVVLRGKKNAEKALEAVNGKE 222
Query: 174 ---KSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSA 230
+++ + DK A + + D + +++ SD+E DD+
Sbjct: 223 VDGRTLAVDWAVDK---------------AVWENIQQDSQEQGNGEEEESSDAEMADDAE 267
Query: 231 GDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKD 290
+ DDDG+ E+E+ D E A + + ++
Sbjct: 268 AESGVDDDGDLPEDEDMD-----------------------EIAQSDEDEDEEEEEEEEE 304
Query: 291 VQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIP 350
+++ + +F+RNLP+T T++ L EHF++FG + IVVD +T+R +G +V +
Sbjct: 305 EKEDERTAATVFIRNLPFTCTDETLYEHFTQFGPLRYARIVVDPETERPRGTGFVCFWKV 364
Query: 351 ESASRAI 357
E A+ +
Sbjct: 365 EDAAACV 371
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 86/156 (55%), Gaps = 6/156 (3%)
Query: 259 SIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQE-VLESGR--LFVRNLPYTATEDEL 315
++ ++ H + E N E V+ ++ + VQ+E V + R LFVR+LP + T ++L
Sbjct: 2 AVRDETSHKTLPEGRGNSEEVEAAMDTAKNDTVQEESVSDKPRRTLFVRSLPASVTTEKL 61
Query: 316 REHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA 375
E+FS+ + +V D +TK+SKG +V +A + A A++ + S+F G+ + V A
Sbjct: 62 VEYFSQSYVIKHALVVNDSETKQSKGYGFVTFADVDDAKAALDEFNGSVFDGKKIKVDYA 121
Query: 376 --RHKKSSDKQELHNSTSQGTKTLKQRREEERKASE 409
RH ++ D+ + S K++RE+ER A++
Sbjct: 122 QPRH-RTVDENAGKSVPSSAALEAKKQREQERAATQ 156
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 284 PSSSS------KDVQQEVLESGRLFVRNLPYTATE-DELREHFSKFGNVSEVHIVVDKDT 336
PSS++ ++ ++ + +L VRNLP++ E D+L HF FG + V++ K
Sbjct: 137 PSSAALEAKKQREQERAATQPPKLIVRNLPWSIKEPDDLAVHFRSFGKIKYVNL--PKKG 194
Query: 337 KRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
+ G +V+ ++A +A+E ++ GR L V
Sbjct: 195 NKLAGFGFVVLRGKKNAEKALEAVNGKEVDGRTLAV 230
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ES ++FV + ++ + LRE F+K+G V E ++VD++T RS+G +V Y E AS
Sbjct: 40 MESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASS 99
Query: 356 AIEVLDNSIFQGRLLHVMPA 375
AI+ LD GR + V A
Sbjct: 100 AIQALDGQDLHGRRVRVNYA 119
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ES +FV ++F T D++LR+ F K G ++ +V + G+ S GFGF+ + S
Sbjct: 40 MESSKVFVGGISFSTDDQSLREAF---TKYGEVIEARVIVDRETGR--SRGFGFVTYTSS 94
Query: 673 ETATNVCRDLQGTILDGHALILQLCH 698
E A++ + L G L G + + +
Sbjct: 95 EEASSAIQALDGQDLHGRRVRVNYAN 120
>gi|386747352|ref|YP_006220560.1| RNA-binding protein [Helicobacter cetorum MIT 99-5656]
gi|384553594|gb|AFI05350.1| RNA-binding protein [Helicobacter cetorum MIT 99-5656]
Length = 82
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+AT +E++E FS+FG V V ++ D++TKR KG +V E+A+ AI L
Sbjct: 4 IYVGNLVYSATNEEVKELFSQFGEVFSVKLISDRETKRPKGFGFVEMQ-KENANEAIAKL 62
Query: 361 DNSIFQGRLLHVMPARHKKS 380
DN+ F GR++ V A KKS
Sbjct: 63 DNTDFMGRIIRVTEANPKKS 82
>gi|327398778|ref|YP_004339647.1| RNP-1 like RNA-binding protein [Hippea maritima DSM 10411]
gi|327181407|gb|AEA33588.1| RNP-1 like RNA-binding protein [Hippea maritima DSM 10411]
Length = 86
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V NLPY+ TEDEL+E F ++G VS I+ D++T RS+G +V + + A +AI+ L
Sbjct: 5 LYVGNLPYSTTEDELKELFGEYGEVSSTKIITDRETGRSRGFGFVEMS-DDDAQKAIDSL 63
Query: 361 DNSIFQGRLLHVMPARHKK 379
+ F GR L V AR +K
Sbjct: 64 NGVNFGGRNLKVNEARERK 82
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKYF 61
+ V NLP TED L++ F + GE++ K++ ++ G+SR F F+ ++ +A++AI
Sbjct: 5 LYVGNLPYSTTEDELKELFGEYGEVSSTKIITDRETGRSRGFGFVEM-SDDDAQKAIDSL 63
Query: 62 N 62
N
Sbjct: 64 N 64
>gi|452824419|gb|EME31422.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 148
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E R+FV LP++ +E++L++ FSK+G V + +V+D++T RS+G ++ YA S
Sbjct: 3 EDNRVFVGGLPWSISEEDLKQVFSKYGEVVDARVVIDRETGRSRGFGFISYAESSSVDEC 62
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQ 384
I LD QGR + V A ++ D +
Sbjct: 63 IAALDGQDLQGRTIRVNKAMTREQRDDE 90
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAI 58
+R+ V LP ++E+ L+ FS+ GE+ DA+++ ++ G+SR F FI + +E I
Sbjct: 5 NRVFVGGLPWSISEEDLKQVFSKYGEVVDARVVIDRETGRSRGFGFISYAESSSVDECI 63
>gi|409050235|gb|EKM59712.1| hypothetical protein PHACADRAFT_250387 [Phanerochaete carnosa
HHB-10118-sp]
Length = 203
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+F+ N+ Y +T +E+++HF G ++ V I+ DK T KG AYV +A PES A+ +
Sbjct: 84 IFIGNVDYASTPEEIQQHFQACGTINRVTILCDKFTGHPKGFAYVEFAEPESIDTAL-AM 142
Query: 361 DNSIFQGRLLHVMPAR 376
DNS+F+GRL+ V R
Sbjct: 143 DNSLFRGRLIKVTSKR 158
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 68.9 bits (167), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 291 VQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIP 350
V Q ++ S +LF+ L + E+ LR+ FS FG V+EV I++D+DT RS+G +V + P
Sbjct: 37 VAQRMMSSSKLFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSP 96
Query: 351 ESASRAIEVLDNSIFQGRLLHVMPARHK 378
E A A++ +D GR + V A K
Sbjct: 97 EEAEVALQEMDGRELAGRQIRVDYATDK 124
Score = 43.5 bits (101), Expect = 0.44, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S++ + L E+ LRD FS G +T+ K++ +D G+SR F F+ F + +EAE A++
Sbjct: 45 SKLFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQ 104
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 178/433 (41%), Gaps = 87/433 (20%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + + +L + FS+ G V V + D ++++S G AYV Y A+RA+E+L
Sbjct: 37 LYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALELL 96
Query: 361 DNSIFQGRLLHVM-----PARHK------------KSSDKQELHNSTSQGTKTLKQRREE 403
+ + G+ + +M P+ K KS D + L+++ L +
Sbjct: 97 NFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSCK--- 153
Query: 404 ERKASEASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI 462
A++ SG ++ + + F + ++ I + +G+ +D
Sbjct: 154 --IATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLIND--------------------- 190
Query: 463 AETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD 522
KK V E S+ +K SN VKNL ++ EL +MFGK+G++
Sbjct: 191 ---KKVFVGPFVRKQDRENVSSN----IKFSN--VYVKNLSDTVTDDELKEMFGKYGTIT 241
Query: 523 KVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSK 577
++ ++ V F AA A + L K + LY+ A + +
Sbjct: 242 SAVVMRDSDGKSRCFGFVNFENADAAAQAVQELNGKIFNDKELYVGRAQKKSEREMELKE 301
Query: 578 GNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFG 637
+KN V E + ++ +L++KNL DE LR+ F
Sbjct: 302 KFEKNVQEVAE-----------------------KFQNTNLYLKNLEENIDDEKLRELFA 338
Query: 638 EHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
E+ G I S KV +++ VS G GF+ F S E A ++ G ++ L + L
Sbjct: 339 EY---GNITSCKV---MRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVALA 392
Query: 698 HAKKDEQVVKKAE 710
K+D + +A+
Sbjct: 393 QRKEDRKAKLQAQ 405
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S + VKNL VT+D L++ F + G IT A +MR DGKSR F F+ F A +A++
Sbjct: 214 SNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQE 273
Query: 61 FN 62
N
Sbjct: 274 LN 275
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 46/78 (58%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KNL + + +++LR+ F++ G IT K+MR +G SR F+ F++ ++A A+
Sbjct: 317 TNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTE 376
Query: 61 FNKSYLDTCRISCEIARK 78
N + + + +A++
Sbjct: 377 MNGKMVGSKPLYVALAQR 394
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 289 KDVQQ--EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
K+VQ+ E ++ L+++NL +++LRE F+++GN++ ++ D + S+G +V
Sbjct: 305 KNVQEVAEKFQNTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGV-SRGSGFVA 363
Query: 347 YAIPESASRAIEVLDNSIFQGRLLHVMPARHKK 379
+ E A+RA+ ++ + + L+V A+ K+
Sbjct: 364 FKSAEDANRALTEMNGKMVGSKPLYVALAQRKE 396
>gi|157139408|ref|XP_001647574.1| RNA binding motif protein [Aedes aegypti]
gi|108865819|gb|EAT32242.1| AAEL015645-PA [Aedes aegypti]
Length = 263
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 77/130 (59%), Gaps = 10/130 (7%)
Query: 606 ADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFG 665
+D+ P+ E +LF+KNL+F+T +E++R+ F G I SV+V + GKN S G+G
Sbjct: 13 SDLSPE--EGTTLFLKNLSFQTNEESIRETFRNM---GPIHSVQVVRRKDGGKNESRGYG 67
Query: 666 FIEFDSVETATNVCRDLQGTILDGHALIL----QLCHAKKDEQVVKKAE-KDKSSTKLLV 720
FI+F ++A + ++LQ +DG + L + + + D K ++ K ++ TK+LV
Sbjct: 68 FIQFKFRKSADSALKNLQSVHIDGRKVELSRSDRTLNTEADTHGRKASKLKKQTGTKILV 127
Query: 721 RNVAFEAQRK 730
RNV F+A K
Sbjct: 128 RNVPFQANAK 137
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 13/138 (9%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP---------STKTLALVVFLEPV 541
K++ LV+N+P+ ++ E+ +F FG L V LP S + V F+
Sbjct: 119 KQTGTKILVRNVPFQANAKEIRDLFKVFGELKSVRLPRKMVSSADESHRGFCFVDFVTEN 178
Query: 542 EAAAAFKGLAYKRY-KGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRA---LLE 597
+A AF+ L + G L LEWA +D + + +K G DAKR+ + +
Sbjct: 179 DAKQAFEALCQSTHLYGRRLVLEWAEADDGVEELRKRTAEKFAGTSGSSDAKRSRKGVFD 238
Query: 598 QQLEGVTDADIDPDRVES 615
G DAD D ES
Sbjct: 239 SSQMGTHDADRAEDVDES 256
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR--SKGIAYVLYAIPESAS 354
E LF++NL + E+ +RE F G + V +V KD + S+G ++ + +SA
Sbjct: 19 EGTTLFLKNLSFQTNEESIRETFRNMGPIHSVQVVRRKDGGKNESRGYGFIQFKFRKSAD 78
Query: 355 RAIEVLDNSIFQGR 368
A++ L + GR
Sbjct: 79 SALKNLQSVHIDGR 92
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDG---KSRQFAFIGFRTEQEAEEAIK 59
+ +KNL E+ +R+ F G I +++R KDG +SR + FI F+ + A+ A+K
Sbjct: 23 LFLKNLSFQTNEESIRETFRNMGPIHSVQVVRRKDGGKNESRGYGFIQFKFRKSADSALK 82
Query: 60 YFNKSYLDTCRISCEIAR 77
++D ++ E++R
Sbjct: 83 NLQSVHIDGRKV--ELSR 98
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 285 SSSSKDVQQEV--LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
+SSS + Q + + S +LFV L Y E LR+ F+ +G V E I+ D++T RS+G
Sbjct: 15 TSSSPALYQSIRCMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGF 74
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHK 378
++ YA E AS AI LD GR + V A +
Sbjct: 75 GFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S++ V L E LRD F+ G++ +AK++ ++ G+SR F FI + + +EA AI
Sbjct: 31 SKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAIT 90
Query: 60 YFNKSYLDTCRISCEIA 76
+ LD I A
Sbjct: 91 ALDGKDLDGRNIRVNTA 107
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ S LFV L++ T +++LR F + G+++ K+ + G+ S GFGFI + S
Sbjct: 28 MSSSKLFVGGLSYGTDEQSLRDTFANY---GQVIEAKIINDRETGR--SRGFGFITYASS 82
Query: 673 ETATNVCRDLQGTILDGH 690
E A+ L G LDG
Sbjct: 83 EEASAAITALDGKDLDGR 100
>gi|387596587|gb|EIJ94208.1| hypothetical protein NEPG_00875 [Nematocida parisii ERTm1]
Length = 161
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 51/73 (69%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
RI VKNLP T+ +++ FS+KG TD +L+ T G+SR AFIG++TE+E+E +I ++
Sbjct: 2 RIIVKNLPVTATKQDIKEHFSEKGVPTDVRLLSTMRGESRGIAFIGYKTEEESEASIVHY 61
Query: 62 NKSYLDTCRISCE 74
N++Y + ++ +
Sbjct: 62 NRAYYNGNKLVVQ 74
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 11/104 (10%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR--SKGIAYVLYAIPESASRAI 357
R+ V+NLP TAT+ +++EHFS+ G ++V ++ T R S+GIA++ Y E + +I
Sbjct: 2 RIIVKNLPVTATKQDIKEHFSEKGVPTDVRLL---STMRGESRGIAFIGYKTEEESEASI 58
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRR 401
+ + + G L V + S+ +E N T Q + +KQ++
Sbjct: 59 VHYNRAYYNGNKLVV------QKSESKEARNRTMQEDRPVKQQK 96
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ S +LF+ + Y+ E LRE FS++G+V + I++D+DT RS+G ++ +A E AS
Sbjct: 37 MSSAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASS 96
Query: 356 AIEVLDNSIFQGRLLHV 372
A++ +DN GR + V
Sbjct: 97 ALQAMDNKELDGRTVRV 113
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
+++ + + E LR+ FS+ G++ DAK++ +D G+SR F FI F T +EA A++
Sbjct: 40 AKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASSALQ 99
Query: 60 YFNKSYLD--TCRISCEIAR 77
+ LD T R++ R
Sbjct: 100 AMDNKELDGRTVRVNYATER 119
>gi|432102707|gb|ELK30188.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 650
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 177/455 (38%), Gaps = 85/455 (18%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
PG PS+S L+V +L TE L E FS G + V + D + RS
Sbjct: 14 PGFPSAS-------------LYVGDLHPEVTEAMLYEKFSAAGPILSVRVCRDALSSRSL 60
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
G YV + PE A A+ ++ + G+ + +M S + + N
Sbjct: 61 GYGYVNFHRPEDAGHALNTMNFDVLHGKPVRIMWCHRDPSLRRSGVGNVFVNHL------ 114
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVV-------ENIARKHGVSKSDLLDREANDLAVR 453
+AS + K LF T++ EN + HG + REA D A++
Sbjct: 115 --------DASIDNKELYDLFAGFGTILSCKVVSDENGPKGHGFVHFE--TREAADKAIK 164
Query: 454 IALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAK 513
G + + +K + EE K +++ +V+ VKN +++ L +
Sbjct: 165 EMNGS---LVKERKVFVGQFKRPNQREEERRAK---MEQFTNVY-VKNFADGTTDEYLLE 217
Query: 514 MFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSD 568
+F ++G L V + + +K + F +A A + + K++ G +Y+
Sbjct: 218 IFSQYGPLSSVKIMTDDSGKSKGFGFIRFECHADAKRAIEEVNGKQFGGRKIYV------ 271
Query: 569 VLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTC 628
S+ +K + + + ++ + SLFVKNL T
Sbjct: 272 -------SRAQKKKEREEELQQKLEEIKQNRIA----------KYHGMSLFVKNLAESTD 314
Query: 629 DENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILD 688
DE+LRK F G + S KV +K G+ GFGF+ F S E A ++ G +L
Sbjct: 315 DEHLRKIFAPF---GTVTSAKVI--VKGGRR--KGFGFVSFSSREEAKKAVEEMHGKMLS 367
Query: 689 GHALILQLCHAKKDEQVV-------KKAEKDKSST 716
L + K++ + KKA KS +
Sbjct: 368 ARPLYVSYARYKQERRAYFASYYGKKKASPAKSPS 402
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN T++ L + FSQ G ++ K+M GKS+ F FI F +A+ AI+
Sbjct: 199 TNVYVKNFADGTTDEYLLEIFSQYGPLSSVKIMTDDSGKSKGFGFIRFECHADAKRAIEE 258
Query: 61 FNKSYLDTCRISCEIARK 78
N +I A+K
Sbjct: 259 VNGKQFGGRKIYVSRAQK 276
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ++ LR F+ G +T AK++ K G+ + F F+ F + +EA++A++ +
Sbjct: 304 LFVKNLAESTDDEHLRKIFAPFGTVTSAKVI-VKGGRRKGFGFVSFSSREEAKKAVEEMH 362
Query: 63 KSYLDTCRISCEIAR 77
L + AR
Sbjct: 363 GKMLSARPLYVSYAR 377
>gi|224110196|ref|XP_002315444.1| predicted protein [Populus trichocarpa]
gi|222864484|gb|EEF01615.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 278 IVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTK 337
+++ NP SS+ Q + + +LF+ L + +E LR F FG + EV I++DK +K
Sbjct: 198 LINSANPPDSSEASQITHVRTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISK 257
Query: 338 RSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV-----MPARHKKSSDKQ 384
RSKG A+V Y E+AS A++ ++ I G ++ V P R+ + +Q
Sbjct: 258 RSKGYAFVKYTTEEAASSALKEMNGKIINGWMIVVDVAKSNPPRYSRGRPRQ 309
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 50/87 (57%), Gaps = 11/87 (12%)
Query: 613 VESRSLFVKNLNFKTCDENLR---KHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEF 669
V ++ LF+ L+F T ++ LR + FGE + E +I+ K+ K S G+ F+++
Sbjct: 216 VRTKKLFITGLSFYTSEKTLRAAFEGFGELV-EVKIIMDKISKR-------SKGYAFVKY 267
Query: 670 DSVETATNVCRDLQGTILDGHALILQL 696
+ E A++ +++ G I++G +++ +
Sbjct: 268 TTEEAASSALKEMNGKIINGWMIVVDV 294
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIKY 60
++ + L Y +E LR F GE+ + K++ K K S+ +AF+ + TE+ A A+K
Sbjct: 220 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFVKYTTEEAASSALKE 279
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSR 90
N ++ I ++A+ N PR +SR
Sbjct: 280 MNGKIINGWMIVVDVAKS----NPPR-YSR 304
>gi|238492008|ref|XP_002377241.1| ribosome biogenesis (Nop4), putative [Aspergillus flavus NRRL3357]
gi|220697654|gb|EED53995.1| ribosome biogenesis (Nop4), putative [Aspergillus flavus NRRL3357]
Length = 729
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 160/367 (43%), Gaps = 51/367 (13%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIKYF 61
+ V++LP VT ++L ++FSQ I A ++ + K S+ + F+ F +A+ A+ F
Sbjct: 47 LFVRSLPASVTTEKLVEYFSQSYVIKHALVVNDSETKQSKGYGFVTFADVDDAKAALDEF 106
Query: 62 NKSYLDTCRISCEIAR---KVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTI 118
N S D +I + A+ + D N + + + K+ E E+ K +
Sbjct: 107 NGSVFDGKKIKVDYAQPRHRTVDENAGKSVPSSAALEAKKQREQERAATQPPKLIVRNLP 166
Query: 119 EKVTENDD-----PQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
+ E DD + V P+ +K+ G + + K +E +A+ G E
Sbjct: 167 WSIKEPDDLAVHFRSFGKIKYVNLPKKGNKLAG----FGFVVLRGKKNAEKALEAVNGKE 222
Query: 174 ---KSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSA 230
+++ + DK A + + D + +++ SD+E DD+
Sbjct: 223 VDGRTLAVDWAVDK---------------AVWENIQQDSQEQGNGEEEESSDAEMADDAE 267
Query: 231 GDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKD 290
+ DDDG+ E+E+ D S+E+ D ++ ++
Sbjct: 268 AESGVDDDGDLPEDEDMDEIAQSDEDEDEEEEEE--------------------EEEEEE 307
Query: 291 VQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIP 350
+++ + +F+RNLP+T T++ L EHF++FG + IVVD +T+R +G +V +
Sbjct: 308 EKEDERTAATVFIRNLPFTCTDETLYEHFTQFGPLRYARIVVDPETERPRGTGFVCFWKV 367
Query: 351 ESASRAI 357
E A+ +
Sbjct: 368 EDAAACV 374
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 86/156 (55%), Gaps = 6/156 (3%)
Query: 259 SIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQE-VLESGR--LFVRNLPYTATEDEL 315
++ ++ H + E N E V+ ++ + VQ+E V + R LFVR+LP + T ++L
Sbjct: 2 AVRDETSHKTLPEGRGNSEEVEAAMDTAKNDTVQEESVSDKPRRTLFVRSLPASVTTEKL 61
Query: 316 REHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA 375
E+FS+ + +V D +TK+SKG +V +A + A A++ + S+F G+ + V A
Sbjct: 62 VEYFSQSYVIKHALVVNDSETKQSKGYGFVTFADVDDAKAALDEFNGSVFDGKKIKVDYA 121
Query: 376 --RHKKSSDKQELHNSTSQGTKTLKQRREEERKASE 409
RH ++ D+ + S K++RE+ER A++
Sbjct: 122 QPRH-RTVDENAGKSVPSSAALEAKKQREQERAATQ 156
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 284 PSSSS------KDVQQEVLESGRLFVRNLPYTATE-DELREHFSKFGNVSEVHIVVDKDT 336
PSS++ ++ ++ + +L VRNLP++ E D+L HF FG + V++ K
Sbjct: 137 PSSAALEAKKQREQERAATQPPKLIVRNLPWSIKEPDDLAVHFRSFGKIKYVNL--PKKG 194
Query: 337 KRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
+ G +V+ ++A +A+E ++ GR L V
Sbjct: 195 NKLAGFGFVVLRGKKNAEKALEAVNGKEVDGRTLAV 230
>gi|356512219|ref|XP_003524818.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Glycine max]
Length = 149
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 57/98 (58%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
V+P + ++ + + ++ V+NLPY+ E L++ FS FG ++E +V D +TKR
Sbjct: 20 VNPSLLPFRASSLRHDYPLASKIVVKNLPYSTGETTLQKEFSNFGKIAEGKLVKDMNTKR 79
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
SKGIA++ Y + A A+E +D F GR + V AR
Sbjct: 80 SKGIAFIQYTCQDDAMLALETMDQKDFYGRTIGVEIAR 117
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIK 59
S+I VKNLP E L+ FS G+I + KL++ + K S+ AFI + + +A A++
Sbjct: 40 SKIVVKNLPYSTGETTLQKEFSNFGKIAEGKLVKDMNTKRSKGIAFIQYTCQDDAMLALE 99
Query: 60 YFNKSYLDTCRISCEIARKVGD-----PNMPRPWSRYSLKKEKEV 99
++ I EIAR D P P ++ L ++ EV
Sbjct: 100 TMDQKDFYGRTIGVEIARLGWDDFGASPRASGPPKKWHLPEQGEV 144
>gi|448537326|ref|XP_003871310.1| cytoplasmic RNA-binding protein [Candida orthopsilosis Co 90-125]
gi|380355667|emb|CCG25185.1| cytoplasmic RNA-binding protein [Candida orthopsilosis]
Length = 216
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 74/129 (57%), Gaps = 14/129 (10%)
Query: 248 DHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLP 307
DHN +N + + DS +SG DA+G P+++ D ++ ++ +++ N+
Sbjct: 56 DHNTYTNPD----LVDSSNSG----DASGV------PTAAQLDAERRESDARSVYIGNVD 101
Query: 308 YTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQG 367
Y T EL++HFS G V+ V I+ +K T + KG AY+ ++ +S ++A+ LD SIF+
Sbjct: 102 YPTTPLELQQHFSPAGTVNRVTIMTNKVTGQPKGFAYLEFSDVDSMNKAVATLDGSIFRD 161
Query: 368 RLLHVMPAR 376
R L V+P R
Sbjct: 162 RPLKVLPKR 170
>gi|145219698|ref|YP_001130407.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
gi|145205862|gb|ABP36905.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
Length = 90
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLPYT +ED+LR+ FS+FG V +I++DK + RSKG +V + ++A AIE +
Sbjct: 3 IYVGNLPYTVSEDDLRDAFSEFGQVESANIIMDKFSGRSKGFGFVEMSDDDAAREAIEAM 62
Query: 361 DNSIFQGRLLHVMPARHKK 379
N F GR + V A+ ++
Sbjct: 63 HNKDFMGRSIMVNEAKPRE 81
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKYF 61
I V NLP V+ED LRD FS+ G++ A ++ K G+S+ F F+ + A EAI+
Sbjct: 3 IYVGNLPYTVSEDDLRDAFSEFGQVESANIIMDKFSGRSKGFGFVEMSDDDAAREAIEAM 62
Query: 62 -NKSYL 66
NK ++
Sbjct: 63 HNKDFM 68
>gi|62733051|gb|AAX95168.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77549578|gb|ABA92375.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|222615796|gb|EEE51928.1| hypothetical protein OsJ_33542 [Oryza sativa Japonica Group]
Length = 465
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 109/254 (42%), Gaps = 25/254 (9%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+F+ LP TE++LRE FG + EV ++ DK+TK +KG A+V + E+A RAIE L
Sbjct: 106 VFIGGLPRDTTEEDLRELCDSFGEIYEVRLMKDKETKENKGFAFVNFTAKEAAQRAIEEL 165
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ +GR L R S K L K L + EE RK + G +
Sbjct: 166 HDKEHKGRTL-----RCSLSQAKHRLF--VGNVPKGLGE--EELRKIIQGKGPGVVNIEM 216
Query: 421 FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLE 480
F + + +R G + + D A Q ++ + + + VS E
Sbjct: 217 F----KDLHDPSRNRGFLFVEYYNHACADYA-------RQKLSAPNFKVDGSQLTVSWAE 265
Query: 481 EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK-----TLALV 535
+ + VKNLP ++S+ ++ ++F K G + KV+LP K V
Sbjct: 266 PKGSSDSSSAAAQVKTIYVKNLPENASKEKIKEIFEKHGEVTKVVLPPAKDGHKRDFGFV 325
Query: 536 VFLEPVEAAAAFKG 549
F E A A KG
Sbjct: 326 HFAERSSALKAVKG 339
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I VKNLP+ +++++++ F + GE+T L KDG R F F+ F A +A+K
Sbjct: 282 IYVKNLPENASKEKIKEIFEKHGEVTKVVLPPAKDGHKRDFGFVHFAERSSALKAVKGSE 341
Query: 63 KSYLDTCRISCEIARKVGD------------PNMPRP 87
K + + +A+ +GD PN P P
Sbjct: 342 KYEFNGQVLEVSMAKPLGDKKPDHSFKPAGAPNFPLP 378
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAI 58
S + + LP+ TE+ LR+ GEI + +LM+ K+ K ++ FAF+ F ++ A+ AI
Sbjct: 104 SEVFIGGLPRDTTEEDLRELCDSFGEIYEVRLMKDKETKENKGFAFVNFTAKEAAQRAI 162
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V+NLP A++++++E F K G V++V + KD + + +V +A SA +A++
Sbjct: 282 IYVKNLPENASKEKIKEIFEKHGEVTKVVLPPAKDGHK-RDFGFVHFAERSSALKAVKGS 340
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTL 397
+ F G++L V A K DK+ H+ G
Sbjct: 341 EKYEFNGQVLEVSMA--KPLGDKKPDHSFKPAGAPNF 375
>gi|323454513|gb|EGB10383.1| hypothetical protein AURANDRAFT_23087 [Aureococcus anophagefferens]
Length = 187
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V + Y AT +EL+ HF+ G ++ V I+ DK T RSKG AYV + P S A+ +L
Sbjct: 77 IYVGQVDYDATPEELQAHFAACGTINRVTILCDKFTGRSKGYAYVEFEEPASVPTAV-LL 135
Query: 361 DNSIFQGRLLHVMPAR 376
DNSIF+GR L V+ R
Sbjct: 136 DNSIFKGRQLKVVAKR 151
>gi|29841211|gb|AAP06224.1| similar to hypothetical RNA-binding protein KIAA0682; hypothetical
protein with RRM domain, similar to hypothetical
RNA-binding protein KIAA0682 [Schistosoma japonicum]
Length = 173
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 42/58 (72%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+L++GRLFVRNLPY TE EL + FS +G++S++H+ D ++ SKG A+V Y P +
Sbjct: 115 MLQTGRLFVRNLPYDCTEKELEKLFSPYGSLSDIHLAFDSWSQVSKGFAFVTYLFPST 172
>gi|39996426|ref|NP_952377.1| RNA-binding protein [Geobacter sulfurreducens PCA]
gi|409911860|ref|YP_006890325.1| RNA-binding protein [Geobacter sulfurreducens KN400]
gi|39983306|gb|AAR34700.1| RNA-binding protein [Geobacter sulfurreducens PCA]
gi|298505436|gb|ADI84159.1| RNA-binding protein [Geobacter sulfurreducens KN400]
Length = 107
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 51/83 (61%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V ++ Y ATED+LR FS G V+ VHI+ D +T RSKG YV E A AIE L
Sbjct: 5 LYVGHMSYEATEDDLRRLFSVAGTVTSVHIITDPETGRSKGCGYVRMLTEEEAKEAIETL 64
Query: 361 DNSIFQGRLLHVMPARHKKSSDK 383
D ++ + R++ V AR +K + +
Sbjct: 65 DGALLRNRVITVSVARPQKQATR 87
>gi|317485939|ref|ZP_07944796.1| RNA recognition domain-containing protein [Bilophila wadsworthia
3_1_6]
gi|316922807|gb|EFV44036.1| RNA recognition domain-containing protein [Bilophila wadsworthia
3_1_6]
Length = 90
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V NLP++ATED++R+ F+ +G V+ V +V D++T R++G +V A E A+E L
Sbjct: 5 LYVGNLPWSATEDDVRDLFAPYGEVTSVKLVSDRETGRARGFGFVEMA-SEGVQAAVEAL 63
Query: 361 DNSIFQGRLLHVMPARHKKS 380
DN F GR L V AR +++
Sbjct: 64 DNFSFSGRNLKVNEARPREA 83
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTE--QEAEEAIK 59
+ V NLP TED +RD F+ GE+T KL+ ++ G++R F F+ +E Q A EA+
Sbjct: 5 LYVGNLPWSATEDDVRDLFAPYGEVTSVKLVSDRETGRARGFGFVEMASEGVQAAVEALD 64
Query: 60 YFNKS 64
F+ S
Sbjct: 65 NFSFS 69
>gi|157131445|ref|XP_001655849.1| hypothetical protein AaeL_AAEL012100 [Aedes aegypti]
gi|108871520|gb|EAT35745.1| AAEL012100-PA [Aedes aegypti]
Length = 434
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 26/151 (17%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G +++++LP+ E++LR FS+FG+V+ VH+ K T RS+G AYV + E A A
Sbjct: 47 EKGIIYMKHLPHGFFENQLRAFFSQFGHVTRVHVARSKRTLRSRGYAYVEFLYREVAQIA 106
Query: 357 IEVLDNSIFQGRLLH--VMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT 414
E ++N + G+LL V+PA G K + ++ E KA +A+G
Sbjct: 107 AETMNNYLMFGKLLKTGVLPA-----------------GAKRIPRKYE---KAYDANGKE 146
Query: 415 KAWNSLFMRPDTVVENIARKHGVSKSDLLDR 445
+L+++ VV++ AR V+K+ +++R
Sbjct: 147 TTTYNLWLK-KQVVKSNAR---VTKTKVVNR 173
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDG-KSRQFAFIGFRTEQEAEEAIKYF 61
I +K+LP E++LR FFSQ G +T + R+K +SR +A++ F + A+ A +
Sbjct: 51 IYMKHLPHGFFENQLRAFFSQFGHVTRVHVARSKRTLRSRGYAYVEFLYREVAQIAAETM 110
Query: 62 NKSYL 66
N +YL
Sbjct: 111 N-NYL 114
>gi|443896410|dbj|GAC73754.1| nucleolar protein fibrillarin NOP77 [Pseudozyma antarctica T-34]
Length = 1060
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFV LPYTAT +L+ FS+ G + +V D+ TKRSKG+ YV +AIPE A A++ L
Sbjct: 54 LFVSRLPYTATTTDLQTLFSEIGPLKRAFVVTDQATKRSKGVGYVTFAIPEDAQTALDQL 113
Query: 361 DNSIFQG--RLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR-REEERKASEASG 412
G R +H+ A K + + Q + + +R R E K + +G
Sbjct: 114 QEKSLDGGSRKIHITFADQKDPTGNKRTPVKADQDSPSSSKRPRTESSKPARQAG 168
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E LFVRNLPY ATE+ELR F FG + I +DK T RSKG +V + ESA
Sbjct: 593 EGTTLFVRNLPYQATEEELRNLFRTFGPLRYAKITMDKATNRSKGTGFVCFWQAESA--- 649
Query: 357 IEVLDNSIFQGRLL 370
D ++ Q R++
Sbjct: 650 ----DAALAQARII 659
>gi|260221864|emb|CBA30852.1| Putative RNA-binding protein rbpB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 124
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 280 DPGNPSSSSKDVQQEVLE-SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
+P P++ + E L S +++V NLPY+ T+D L+ +FS+FG V+ +++D+DT R
Sbjct: 9 NPRTPATRADSALTERLTMSSKIYVGNLPYSVTDDSLQSNFSEFGEVTSAKVMMDRDTGR 68
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKK 379
SKG A+V + P A AI+ L+ GR + V AR ++
Sbjct: 69 SKGFAFVEMSTPAFAQAAIDGLNGQSVDGRSIVVNLARPRE 109
Score = 54.3 bits (129), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S+I V NLP VT+D L+ FS+ GE+T AK+M +D G+S+ FAF+ T A+ AI
Sbjct: 29 SKIYVGNLPYSVTDDSLQSNFSEFGEVTSAKVMMDRDTGRSKGFAFVEMSTPAFAQAAID 88
Query: 60 YFNKSYLDTCRISCEIARKVGD 81
N +D I +AR D
Sbjct: 89 GLNGQSVDGRSIVVNLARPRED 110
Score = 40.4 bits (93), Expect = 3.5, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S ++V NL + D++L+ +F E G + S KV G+ S GF F+E +
Sbjct: 28 SSKIYVGNLPYSVTDDSLQSNFSEF---GEVTSAKVMMDRDTGR--SKGFAFVEMSTPAF 82
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKKD 702
A L G +DG ++++ L ++D
Sbjct: 83 AQAAIDGLNGQSVDGRSIVVNLARPRED 110
>gi|119188303|ref|XP_001244758.1| hypothetical protein CIMG_04199 [Coccidioides immitis RS]
gi|392871470|gb|EAS33387.2| ribosome biogenesis protein [Coccidioides immitis RS]
Length = 751
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 282 GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
G SSSK + L FVR+LP +AT + L E+FS+ + V D TK+ KG
Sbjct: 34 GEAHSSSKKAHRRTL-----FVRSLPPSATTESLTEYFSQSYPIKHATAVADPQTKQCKG 88
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA--RHKKSSDKQELHNSTSQGTKTLKQ 399
+V +A E A RA+ L+ S+F GR L + A RH++ +K +++ TK LK+
Sbjct: 89 YGFVTFADVEDAQRALGELNGSVFDGRKLKIEVAEPRHREIDEKIGKSVPSAEATK-LKE 147
Query: 400 RREEERKASE 409
RE+ RK ++
Sbjct: 148 EREQRRKEAQ 157
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY--------AIPES 352
+F+RNLP++AT++ L EHF++FG V IVVD +T R +G +V + I ES
Sbjct: 330 VFIRNLPFSATDETLYEHFTRFGAVRYARIVVDPETDRPRGTGFVCFWKEDEAKACIRES 389
Query: 353 ASRAIEVL 360
R EVL
Sbjct: 390 PKRTEEVL 397
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 27/130 (20%)
Query: 616 RSLFVKNLNFKTCDENLRKHFGEH--IKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
R+LFV++L E+L ++F + IK ++ K K G+GF+ F VE
Sbjct: 46 RTLFVRSLPPSATTESLTEYFSQSYPIKHATAVADPQTKQCK-------GYGFVTFADVE 98
Query: 674 TATNVCRDLQGTILDGHALILQLC---HAKKDEQV---VKKAE------------KDKSS 715
A +L G++ DG L +++ H + DE++ V AE K+
Sbjct: 99 DAQRALGELNGSVFDGRKLKIEVAEPRHREIDEKIGKSVPSAEATKLKEEREQRRKEAQP 158
Query: 716 TKLLVRNVAF 725
KL+VRN+ +
Sbjct: 159 PKLIVRNLPW 168
>gi|212275199|ref|NP_001130054.1| uncharacterized protein LOC100191146 [Zea mays]
gi|194688180|gb|ACF78174.1| unknown [Zea mays]
gi|414878270|tpg|DAA55401.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 254
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 285 SSSSKDVQQEV-LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
+SS+ V Q + S +LFV + Y + LR+ F+K+G V E I++D+++ RS+G
Sbjct: 15 TSSNPSVYQAIRCMSSKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFG 74
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHK 378
+V Y E AS AI LD GR + V A K
Sbjct: 75 FVTYTSSEEASAAITALDGKTLDGRSIRVNHANEK 109
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
R S LFV ++++T D +LR F K G+++ ++ ++G+ S GFGF+ + S
Sbjct: 26 RCMSSKLFVGGISYQTDDHSLRDEF---AKYGQVIEARIIIDRESGR--SRGFGFVTYTS 80
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAKK 701
E A+ L G LDG + +++ HA +
Sbjct: 81 SEEASAAITALDGKTLDGRS--IRVNHANE 108
>gi|345561633|gb|EGX44721.1| hypothetical protein AOL_s00188g59 [Arthrobotrys oligospora ATCC
24927]
Length = 204
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T + KG AYV +A P
Sbjct: 61 KEEIDARSIFVGNVDYGASPEEIQTHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSL 120
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ SIF+GR L V+P R
Sbjct: 121 VAQAL-VLNESIFRGRALKVVPKR 143
>gi|326519426|dbj|BAJ96712.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 992
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 170/388 (43%), Gaps = 43/388 (11%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
R+ V+NLP VT + D FS + + D + ++ DGKS+ FAF+ F +Q+AE AIK
Sbjct: 298 RVIVRNLPFKVTIKEIMDIFSCEAFVWDVSIPQKSDDGKSKGFAFLSFTRKQDAENAIKN 357
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
N + ++ + A P + Y++ + + DE + E+ + +
Sbjct: 358 VNGKVIAKRTVAVDWAV---------PKNVYAVAAKSDAKGDELEDISDKGSDEESSEDN 408
Query: 121 VTENDDPQ-LLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITLH 179
+ DD E Q R+ + ++ AD KV EN+ IK EKS
Sbjct: 409 LVGGDDSDDNCELDQETSNRLPEDDFKSE------ADISRKVLENL---IKSSEKSERSG 459
Query: 180 VKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDG 239
V+S S++ TDS+ + E SD+D +DSE+E+D+
Sbjct: 460 VES--SDIDTDSETENDTP-----EKSSDID----------TDSETENDTPKKKQPQSPA 502
Query: 240 EEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESG 299
+ E D + +SII S + V + + + + S K +++
Sbjct: 503 AVKLAESKDVT-----KAESIIPASKPAAVMLAEPK-LVAETESTVPSLKPNKEDTGLDR 556
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+F+ NLP+ + +E+ E FS FG V V+ K TKR +G ++ ++ E+A A+
Sbjct: 557 TIFISNLPFDISNEEVTERFSVFGKVQSFFPVLHKLTKRPRGTGFLKFSTAEAADAAVSA 616
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELH 387
+ + G + P KK+ DK+ H
Sbjct: 617 ANAAPGLGIFVKSRPLNVKKALDKESAH 644
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+FV NLPYT +L FS+ G V +V K ++ SKG +V +A + A RAI+
Sbjct: 47 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 106
Query: 361 DNSIFQGRLLHV 372
+ GR + V
Sbjct: 107 NGFAVAGRKIRV 118
>gi|225683698|gb|EEH21982.1| nucleolar protein [Paracoccidioides brasiliensis Pb03]
Length = 730
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 162/369 (43%), Gaps = 62/369 (16%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+ V++LP T + L D+FSQ + A + + + +S+ + F+ F ++ A++ F
Sbjct: 50 LFVRSLPLSATTESLTDYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADSEDVARALEEF 109
Query: 62 NKSYLDTCRISCEIA----RKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKT 117
N S D ++ E+A RKV D + S K+E+E + P R +
Sbjct: 110 NGSVFDGKKLKIEVAEPRHRKV-DEKGGKSVSTSKPKRERENKQALVQPPKLIIRNLPWS 168
Query: 118 IEKVTENDDPQLLEFLQVMQPRVK----SKMWANDTLIGLMADQKAKVSENISQAIKGGE 173
I +P+ LE L +VK K + G + + K +E +A+ G E
Sbjct: 169 IA------EPEQLEVLFRSFGKVKHAVIPKKGNKHSGFGFVVLRGRKNAEKALEAVNGKE 222
Query: 174 KSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDD 233
D + D A EK+ DEL + D K + +E ED+ +G++
Sbjct: 223 --------VDGRTLAVD-WAAEKN---IWDELQNHTDGVKD------NGTEKEDNKSGEE 264
Query: 234 DD-----DDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSS 288
D+ DDD E ++ D D +++ D + +H+ V E+D N V
Sbjct: 265 DEETKNQDDDVAMGEVDDEDEGEDVDDDDDDDDDEEVHAEV-EDDRNASTV--------- 314
Query: 289 KDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYA 348
F+RNLP+TAT++ L EHF +FG + +V D +T R +G A+V +
Sbjct: 315 -------------FIRNLPFTATDESLYEHFVQFGPLRYARVVFDPETDRPRGTAFVCFW 361
Query: 349 IPESASRAI 357
E+A+ +
Sbjct: 362 DKENANSCL 370
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 19/133 (14%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFVR+LP +AT + L ++FS+ + +V+D TK+SKG +V +A E +RA+E
Sbjct: 50 LFVRSLPLSATTESLTDYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADSEDVARALEEF 109
Query: 361 DNSIFQGRLLHVMPA--RHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWN 418
+ S+F G+ L + A RH+K +K STS K +RE E K
Sbjct: 110 NGSVFDGKKLKIEVAEPRHRKVDEKGGKSVSTS------KPKRERENK-----------Q 152
Query: 419 SLFMRPDTVVENI 431
+L P ++ N+
Sbjct: 153 ALVQPPKLIIRNL 165
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 292 QQEVLESGRLFVRNLPYTATEDE-LREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIP 350
+Q +++ +L +RNLP++ E E L F FG V H V+ K + G +V+
Sbjct: 151 KQALVQPPKLIIRNLPWSIAEPEQLEVLFRSFGKVK--HAVIPKKGNKHSGFGFVVLRGR 208
Query: 351 ESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNST 390
++A +A+E ++ GR L V A K D EL N T
Sbjct: 209 KNAEKALEAVNGKEVDGRTLAVDWAAEKNIWD--ELQNHT 246
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 588 EHDAKRALLEQQLEGVTDAD--IDPDRVESR-SLFVKNLNFKTCDENLRKHFGEH--IKE 642
+ D + +QQ E + D D + P + ++R +LFV++L E+L +F + +K
Sbjct: 17 QEDGRVPATDQQTEALPDVDAALSPIKAKNRRTLFVRSLPLSATTESLTDYFSQSYPLKH 76
Query: 643 GRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC---HA 699
++ L S G+GF+ F E + G++ DG L +++ H
Sbjct: 77 ATVV-------LDPQTKQSKGYGFVTFADSEDVARALEEFNGSVFDGKKLKIEVAEPRHR 129
Query: 700 KKDEQVVKKAEKDK------------SSTKLLVRNVAF 725
K DE+ K K KL++RN+ +
Sbjct: 130 KVDEKGGKSVSTSKPKRERENKQALVQPPKLIIRNLPW 167
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 285 SSSSKDVQQEV--LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
+SSS + Q + + S +LFV L Y E LR+ F+ +G V E I+ D++T RS+G
Sbjct: 15 TSSSPALYQSIRCMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGF 74
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHK 378
++ YA E AS AI LD GR + V A +
Sbjct: 75 GFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S++ V L E LRD F+ G++ +AK++ ++ G+SR F FI + + +EA AI
Sbjct: 31 SKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAIT 90
Query: 60 YFNKSYLDTCRISCEIA 76
+ LD I A
Sbjct: 91 ALDGKDLDGRNIRVNTA 107
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ S LFV L++ T +++LR F + G+++ K+ + G+ S GFGFI + S
Sbjct: 28 MSSSKLFVGGLSYGTDEQSLRDTFANY---GQVIEAKIINDRETGR--SRGFGFITYASS 82
Query: 673 ETATNVCRDLQGTILDGHAL 692
E A+ L G LDG +
Sbjct: 83 EEASAAITALDGKDLDGRNI 102
>gi|431893576|gb|ELK03439.1| Putative RNA-binding protein 3 [Pteropus alecto]
Length = 213
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 52/93 (55%)
Query: 280 DPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS 339
+ G SS ++ E G+LFV L + E L +HFS FG +SEV +V D++T+RS
Sbjct: 44 NAGKSSSVGLEITAMSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRS 103
Query: 340 KGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
+G ++ + PE AS A+ ++ GR + V
Sbjct: 104 RGFGFITFTNPEHASDAMRAMNGESLDGRQIRV 136
Score = 43.9 bits (102), Expect = 0.36, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L HF G I V V K + + S GFGFI F + E
Sbjct: 61 EEGKLFVGGLNFNTDEQALEDHFSSF---GPISEVVVVKDRETQR--SRGFGFITFTNPE 115
Query: 674 TATNVCRDLQGTILDGHALILQLCHAKK 701
A++ R + G LDG +++ HA K
Sbjct: 116 HASDAMRAMNGESLDGRQ--IRVDHAGK 141
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 167/412 (40%), Gaps = 57/412 (13%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ S L+V L T TE L E F+ G V+ + + D T+RS G AYV Y R
Sbjct: 46 VPSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGER 105
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
A+E L+ S+ + R +M S + T QG +K +E ++A +T
Sbjct: 106 ALEQLNYSLIKNRPCRIM------WSQRDPALRKTGQGNIFIKNL--DEAIDNKALHDTF 157
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVN 475
A + + R G EA + A++ G ++ KK ++
Sbjct: 158 AAFGTVLSCKVATDETGRSKGYGFVHYETAEAAENAIKAVNG---MLLNDKKVYVGHHIS 214
Query: 476 ----VSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP---- 527
S LEE A T+ VKNL + ++ E ++F K+G++ ++
Sbjct: 215 RKERQSKLEEMRAQFTN--------LYVKNLDPEVTQDEFIELFKKYGNVTSAVISVDEE 266
Query: 528 -STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVV 586
+K V F EA A L KG L++ S+ +K +
Sbjct: 267 GKSKGFGFVNFETHDEAQKAVDELNDFELKGKKLFV-------------SRAQKKAER-- 311
Query: 587 GEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRIL 646
E + +R+ + +LE ++ + + +L++KNL D+ LR F G I
Sbjct: 312 -EEELRRSYEQAKLEKLS-------KYQGVNLYIKNLEDDVDDDKLRAEFEPF---GTIT 360
Query: 647 SVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
S KV +++ K S GFGF+ F S + AT ++ ++ L + L
Sbjct: 361 SCKV---MRDEKGQSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQ 409
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL V +D+LR F G IT K+MR + G+S+ F F+ F + EA +A+ N
Sbjct: 335 LYIKNLEDDVDDDKLRAEFEPFGTITSCKVMRDEKGQSKGFGFVCFSSPDEATKAVAEMN 394
Query: 63 KSYLDTCRISCEIARK 78
+ T + +A++
Sbjct: 395 NKMIGTKPLYVSLAQR 410
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL VT+D + F + G +T A + ++GKS+ F F+ F T EA++A+
Sbjct: 230 TNLYVKNLDPEVTQDEFIELFKKYGNVTSAVISVDEEGKSKGFGFVNFETHDEAQKAVDE 289
Query: 61 FN 62
N
Sbjct: 290 LN 291
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + + L D F+ G + K+ + G+S+ + F+ + T + AE AIK N
Sbjct: 139 IFIKNLDEAIDNKALHDTFAAFGTVLSCKVATDETGRSKGYGFVHYETAEAAENAIKAVN 198
Query: 63 KSYLDTCRISC--EIARK 78
L+ ++ I+RK
Sbjct: 199 GMLLNDKKVYVGHHISRK 216
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ S +LFV + + ++ L+E F K+GNV E I++D++T RS+G +V Y E AS
Sbjct: 36 CMSSSKLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEAS 95
Query: 355 RAIEVLDNSIFQGRLLHVMPARHK 378
AI+ LD GR + V A +
Sbjct: 96 SAIQALDGQDLHGRRVRVNYATER 119
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ S LFV ++F+T D +L++ F K G ++ ++ + G+ S GFGF+ + S
Sbjct: 37 MSSSKLFVGGISFQTDDNSLKEAF---DKYGNVVEARIIMDRETGR--SRGFGFVTYTSS 91
Query: 673 ETATNVCRDLQGTILDG 689
E A++ + L G L G
Sbjct: 92 EEASSAIQALDGQDLHG 108
>gi|121705230|ref|XP_001270878.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
gi|119399024|gb|EAW09452.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
Length = 133
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+LF+ L + T+D LR+ F +FG V E +V D+DT RS+G +V ++ A +A++
Sbjct: 3 KLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAMDA 62
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQ 399
++N F GR + V K+S++ +N QG Q
Sbjct: 63 MNNQEFDGRTIRV-----DKASERAPRNNGGFQGRGGYNQ 97
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S++ + L + T+D LR F Q G++ +A +++ +D +SR F F+ F ++ +A++A+
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAMD 61
Query: 60 YFNKSYLDTCRISCEIA 76
N D I + A
Sbjct: 62 AMNNQEFDGRTIRVDKA 78
>gi|146328793|ref|YP_001209360.1| RNA recognition motif-containing protein [Dichelobacter nodosus
VCS1703A]
gi|146232263|gb|ABQ13241.1| RNA recognition motif protein [Dichelobacter nodosus VCS1703A]
Length = 95
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y TEDELR FS+FG+V I+ D+D+ RSKG +V E+A +AIE L
Sbjct: 4 IYVGNLSYRTTEDELRNAFSQFGDVQNASIIKDRDSGRSKGFGFVEMPDAEAAKKAIESL 63
Query: 361 DNSIFQGRLLHVMPARHK 378
++ GR L + AR +
Sbjct: 64 NDKDLGGRNLKINEARPR 81
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKYF 61
I V NL TED LR+ FSQ G++ +A +++ +D G+S+ F F+ + A++AI+
Sbjct: 4 IYVGNLSYRTTEDELRNAFSQFGDVQNASIIKDRDSGRSKGFGFVEMPDAEAAKKAIESL 63
Query: 62 NKSYLDTCRISCEIARKVGDPNMPRP 87
N L + AR P RP
Sbjct: 64 NDKDLGGRNLKINEAR----PREMRP 85
>gi|303316410|ref|XP_003068207.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107888|gb|EER26062.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037953|gb|EFW19889.1| ribosome biogenesis protein Nop4 [Coccidioides posadasii str.
Silveira]
Length = 751
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Query: 282 GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
G SSSK + L FVR+LP +AT + L E+FS+ + V D TK+ KG
Sbjct: 34 GEAHSSSKKAHRRTL-----FVRSLPPSATTESLTEYFSQSYPIKHATAVADPQTKQCKG 88
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA--RHKKSSDKQELHNSTSQGTKTLKQ 399
+V +A E A RA+ L+ S+F GR L + A RH++ +K +++ TK LK+
Sbjct: 89 YGFVTFADVEDAQRALGELNGSVFDGRKLKIEVAEPRHREIDEKIGKSVPSAEATK-LKE 147
Query: 400 RREEERK 406
RE+ RK
Sbjct: 148 EREQRRK 154
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY--------AIPES 352
+F+RNLP++AT++ L EHF++FG V IVVD +T R +G +V + I ES
Sbjct: 330 VFIRNLPFSATDETLYEHFTRFGAVRYARIVVDPETDRPRGTGFVCFWKEDEAKACIRES 389
Query: 353 ASRAIEVL 360
R EVL
Sbjct: 390 PKRTEEVL 397
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 27/130 (20%)
Query: 616 RSLFVKNLNFKTCDENLRKHFGEH--IKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
R+LFV++L E+L ++F + IK ++ K K G+GF+ F VE
Sbjct: 46 RTLFVRSLPPSATTESLTEYFSQSYPIKHATAVADPQTKQCK-------GYGFVTFADVE 98
Query: 674 TATNVCRDLQGTILDGHALILQLC---HAKKDEQV---VKKAE------------KDKSS 715
A +L G++ DG L +++ H + DE++ V AE K+
Sbjct: 99 DAQRALGELNGSVFDGRKLKIEVAEPRHREIDEKIGKSVPSAEATKLKEEREQRRKEARP 158
Query: 716 TKLLVRNVAF 725
KL+VRN+ +
Sbjct: 159 PKLIVRNLPW 168
>gi|195654321|gb|ACG46628.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|238010482|gb|ACR36276.1| unknown [Zea mays]
Length = 252
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 284 PSSSSKDVQQEV-LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
+SS+ V Q + S +LFV + Y + LR+ F+K+G V E I++D+++ RS+G
Sbjct: 14 ATSSNLSVYQAIRCMSSKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGF 73
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHK 378
+V Y E AS AI LD GR + V A K
Sbjct: 74 GFVTYTSSEEASAAITALDGKTLDGRSIRVNHANEK 109
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
R S LFV ++++T D +LR F K G+++ ++ ++G+ S GFGF+ + S
Sbjct: 26 RCMSSKLFVGGISYQTDDHSLRDEF---AKYGQVIEARIIIDRESGR--SRGFGFVTYTS 80
Query: 672 VETATNVCRDLQGTILDGHALILQLCHAKK 701
E A+ L G LDG + +++ HA +
Sbjct: 81 SEEASAAITALDGKTLDGRS--IRVNHANE 108
>gi|212275376|ref|NP_001130564.1| uncharacterized protein LOC100191663 [Zea mays]
gi|194689494|gb|ACF78831.1| unknown [Zea mays]
gi|219887513|gb|ACL54131.1| unknown [Zea mays]
gi|238010456|gb|ACR36263.1| unknown [Zea mays]
gi|413921450|gb|AFW61382.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
gi|413921451|gb|AFW61383.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
gi|413921452|gb|AFW61384.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
gi|413921453|gb|AFW61385.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
Length = 467
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 106/256 (41%), Gaps = 29/256 (11%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+F+ LP TE++LRE G + EV + DKDTK +KG A+V + E+A RAIE +
Sbjct: 107 VFIGGLPRDITEEDLRELCEPLGEIYEVRLTKDKDTKENKGFAFVTFMDKEAAQRAIEDV 166
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ F+GR L R S K L + + EE + G ++
Sbjct: 167 QDREFKGRTL-----RCSLSQAKHRLF------VGNVPKGLSEEELTNTIKGKGPGVINI 215
Query: 421 FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLE 480
M D N R G + + D A Q ++ + + + VS E
Sbjct: 216 EMFKDQHDPN--RNRGFLFVEYYNHACADYA-------RQKLSSPNFKVDGSQLTVSWAE 266
Query: 481 EFSAGKTDGLKRSNHV--FLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-----LA 533
G TD + V VKNLP + S+ ++ +F K G + K++LP K
Sbjct: 267 --PKGSTDASSAAAQVKTIYVKNLPENVSKEKIKDLFDKHGEVTKIVLPPAKAGHKRDFG 324
Query: 534 LVVFLEPVEAAAAFKG 549
V F E A A KG
Sbjct: 325 FVHFAERSSALKAVKG 340
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I VKNLP+ V++++++D F + GE+T L K G R F F+ F A +A+K
Sbjct: 283 IYVKNLPENVSKEKIKDLFDKHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSE 342
Query: 63 KSYLDTCRISCEIARKVGD 81
K +D + +A+ + D
Sbjct: 343 KYEIDGQVLEVSMAKPLAD 361
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIK 59
S + + LP+ +TE+ LR+ GEI + +L + KD K ++ FAF+ F ++ A+ AI+
Sbjct: 105 SEVFIGGLPRDITEEDLRELCEPLGEIYEVRLTKDKDTKENKGFAFVTFMDKEAAQRAIE 164
Query: 60 YFNKSYLDTCRISCEIAR 77
+ C +++
Sbjct: 165 DVQDREFKGRTLRCSLSQ 182
>gi|384494630|gb|EIE85121.1| hypothetical protein RO3G_09831 [Rhizopus delemar RA 99-880]
Length = 203
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E ++S ++V N+ Y A+ +EL+ HF G ++ V I+ DK T KG AYV +A P
Sbjct: 73 KEAVDSRSVYVGNVDYGASPEELQAHFQSCGTINRVTILCDKFTGHPKGYAYVEFAEPSF 132
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
+ A+ LDNS+F+ RLL V P R
Sbjct: 133 VNAAVS-LDNSLFRARLLKVSPKR 155
>gi|406695116|gb|EKC98431.1| hypothetical protein A1Q2_07445 [Trichosporon asahii var. asahii
CBS 8904]
Length = 960
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
P P+ K Q + + LFV +LPY AT +L HFS G + + DK+T +SK
Sbjct: 20 PATPAGKPKR-QSKSEANATLFVSSLPYNATSTDLVTHFSFIGPIRHGFVATDKETGKSK 78
Query: 341 GIAYVLYAIPESASRAIEVLDNSIF--QGRLLHV 372
G+ YV YA+ E A RA+ LD F +GR + V
Sbjct: 79 GVGYVTYAMREDAERALAELDGGAFGDKGRKIRV 112
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
P PS S DV V FVRNLP+ ATE EL + F FG + I +D+ T RS+
Sbjct: 448 PVKPSLPSTDVGATV------FVRNLPFEATEGELGQLFRAFGPIRYARITMDRATGRSR 501
Query: 341 GIAYVLYAIPESASRAIE 358
G +V + PE A AI+
Sbjct: 502 GTGFVCFWNPEHADSAIK 519
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV-----VDKDTKRSKGIAYVLYAIPES 352
+GRL VRNL + TE +LR F FG + + + + R++G A+V + + +
Sbjct: 243 AGRLIVRNLAWETTEADLRATFLPFGPIVSIDLPTAPSKLPNAPPRARGFAFVWFMVKKD 302
Query: 353 ASRAIEVLDN 362
A RA+ ++
Sbjct: 303 AERAMAAING 312
>gi|401885432|gb|EJT49550.1| hypothetical protein A1Q1_01355 [Trichosporon asahii var. asahii
CBS 2479]
Length = 959
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
P P+ K Q + + LFV +LPY AT +L HFS G + + DK+T +SK
Sbjct: 20 PATPAGKPKR-QSKSEANATLFVSSLPYNATSTDLVTHFSFIGPIRHGFVATDKETGKSK 78
Query: 341 GIAYVLYAIPESASRAIEVLDNSIF--QGRLLHV 372
G+ YV YA+ E A RA+ LD F +GR + V
Sbjct: 79 GVGYVTYAMREDAERALAELDGGAFGDKGRKIRV 112
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
P PS S DV V FVRNLP+ ATE EL + F FG + I +D+ T RS+
Sbjct: 447 PVKPSLPSTDVGATV------FVRNLPFEATEGELGQLFRAFGPIRYARITMDRATGRSR 500
Query: 341 GIAYVLYAIPESASRAIE 358
G +V + PE A AI+
Sbjct: 501 GTGFVCFWNPEHADSAIK 518
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV-----VDKDTKRSKGIAYVLYAI 349
V +GRL VRNL + TE +LR F FG + + + + R++G A+V + +
Sbjct: 240 VSHAGRLIVRNLAWETTEADLRATFLPFGPIVSIDLPTAPSKLPNAPPRARGFAFVWFMV 299
Query: 350 PESASRAIEVLDN 362
+ A RA+ ++
Sbjct: 300 KKDAERAMAAING 312
>gi|88811230|ref|ZP_01126486.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88791769|gb|EAR22880.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 94
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++A+EDELRE F+ +GNV V ++ D+DT R +G +V + ++AS AIE L
Sbjct: 4 IYVGNLPFSASEDELRELFAAYGNVDSVRLMTDRDTGRPRGFGFVTMSDTDAAS-AIEAL 62
Query: 361 DNSIFQGRLLHVMPARHKK 379
D F GR L V A+ +K
Sbjct: 63 DGKDFGGRNLRVNEAQERK 81
>gi|406601496|emb|CCH46876.1| Nucleolar protein 4 [Wickerhamomyces ciferrii]
Length = 717
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 15/96 (15%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYV-----------LYAI 349
+FVRNLPY A ED L+EHF +FG V V+DK+T +KG A+V L
Sbjct: 297 IFVRNLPYDADEDTLKEHFEQFGPVRYALPVIDKETGLAKGTAFVAFRKEDAYTKCLSEA 356
Query: 350 PESASRAIEVLDN----SIFQGRLLHVMPARHKKSS 381
P+++S +I + D+ ++QGR+L + P ++S+
Sbjct: 357 PDASSTSILISDDVSPAYVYQGRILSITPTVSRESA 392
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
E L+ LFVR++P+ AT ++L + FS+F V IV D + K S+G +V +++ +
Sbjct: 17 ENLDLKTLFVRSIPFDATSEQLSDFFSQFCPVKHAIIVTDNE-KNSRGFGFVSFSLDDDT 75
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELH 387
A+E + FQGRLL V A+ + DK H
Sbjct: 76 KTALEQSRKNKFQGRLLRVDIAKRRDRKDKDVTH 109
>gi|58262520|ref|XP_568670.1| hypothetical protein CNN01920 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134119016|ref|XP_772012.1| hypothetical protein CNBN1890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254616|gb|EAL17365.1| hypothetical protein CNBN1890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230844|gb|AAW47153.1| hypothetical protein CNN01920 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 999
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 134/338 (39%), Gaps = 87/338 (25%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFV +LPYTAT +L HFS G V + D+++ +SKG+ YV +++ E A RAI+ L
Sbjct: 26 LFVSSLPYTATTTDLLTHFSYIGPVRHGFVATDRESGKSKGVGYVTFSLKEDADRAIQEL 85
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT------ 414
D F G K+++ + +LK R+ E + + G T
Sbjct: 86 DGGSFGG--------------SKRKIQVKWADERASLKDRKAEIKVSKPIPGQTDNKSTD 131
Query: 415 -KAWNSLFMR--PDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ----------- 460
KA +L + P + +N+ K R+ ND A + E Q
Sbjct: 132 PKAIQTLVLTGLPSDITKNVLWKK--------IRKVNDKAELVFPVEAQENEEEAPKDTA 183
Query: 461 ----------------VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHV--FLVKNL 502
+ T K + V LE+ SA K +G K +H +++NL
Sbjct: 184 HIVFPSHGDALKALPKLHGHTYKGNILSCVLKKRLEKLSA-KGEG-KAPSHAGRLIIRNL 241
Query: 503 PYDSSEGELAKMFGKFGSLDKVILPSTKT-------------------LALVVFLEPVEA 543
+D++ +L K F +G + + LP+ + A V FL +A
Sbjct: 242 SWDTTIQDLRKAFLPYGPIHSIDLPTLPSKLPPSSDPAKPPPPPRARGFAFVWFLARHDA 301
Query: 544 AAAFKGLAYKRYKGVP------LYLEWAPSDVLSQSST 575
A +G K K P + ++WA S Q +T
Sbjct: 302 EKAIEGTNGKPIKKGPDGEGRVVAVDWALSKEKWQEAT 339
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 73/172 (42%), Gaps = 29/172 (16%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY--------AIPES 352
LF+RNLP+ TE EL F FG + I +DK T RS+G +V + I E+
Sbjct: 422 LFIRNLPFETTELELNTLFRSFGPLRYAKITIDKATGRSRGTGFVCFWKNEHADEVIEEA 481
Query: 353 ASRAIEVLDNSIFQG-----------RLLHVMPARHKKSSDKQELHNSTSQGTK-----T 396
A+E NSI G LL P+ S + LH T T+ T
Sbjct: 482 QRVAMETGANSIPLGGAAPKNPFALPSLLTADPSSSLAS--RLVLHGRTLDITRAVTRET 539
Query: 397 LKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN 448
Q +E+ + A+ N+ MR + N G+ +S++ R+A+
Sbjct: 540 ASQMKEDTERLRNAADKR---NTYLMREGVIFPNSPAAEGLPESEIEKRQAS 588
>gi|367008356|ref|XP_003678678.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
gi|359746335|emb|CCE89467.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
Length = 588
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 182/440 (41%), Gaps = 85/440 (19%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
P+S+ + Q+ S L+V L + +E L + FS G+VS + + D TK S G A
Sbjct: 27 PASNEPESQKVETSSASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYA 86
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHKKSS------------DKQEL 386
YV + E+ AIE L+ + +G +M P+ KK S D + L
Sbjct: 87 YVNFNDHEAGKTAIEKLNYAPIKGVPCRIMWSQRDPSMRKKGSGNIFIKNLHPDIDNKAL 146
Query: 387 HNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVV-ENIARKHGVSKSDLLDR 445
H++ S L + A++ +GN++ + + D E I +G+ LL+
Sbjct: 147 HDTFSVFGNILSC-----KIATDEAGNSRGFGFVHFEDDEAAKEAIDAINGM----LLNG 197
Query: 446 EANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYD 505
+ +A ++ + Q S L+E A T+ VKN+ D
Sbjct: 198 QEVYVAQHVSKKDRQ----------------SKLDEAKANFTN--------VYVKNIHPD 233
Query: 506 SSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPL 560
+ + E + F K G + L + V + +AA A + L +KG L
Sbjct: 234 TGDEEFEEFFTKVGPITSAHLEKDNEGKLRGFGFVNYENHNDAAKAVEELNETDFKGQTL 293
Query: 561 YLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFV 620
++ A K +++ + +++A R ++ +GV +LFV
Sbjct: 294 HVGRA----------QKKHERLQELKKQYEAFRLEKLEKYQGV-------------NLFV 330
Query: 621 KNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCR 680
KNL+ D+ L + F + G I SVKV + +NGK S GFGF+ F + E AT
Sbjct: 331 KNLDDTIDDQKLEEEFAPY---GTITSVKVMRS-ENGK--SKGFGFVCFSTPEEATKAIT 384
Query: 681 DLQGTILDGHALILQLCHAK 700
+ I+ G L + + K
Sbjct: 385 EKNQQIVAGKPLYVAIAQRK 404
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + + +L + F+ G IT K+MR+++GKS+ F F+ F T +EA +AI N
Sbjct: 328 LFVKNLDDTIDDQKLEEEFAPYGTITSVKVMRSENGKSKGFGFVCFSTPEEATKAITEKN 387
Query: 63 KSYLDTCRISCEIARK 78
+ + + IA++
Sbjct: 388 QQIVAGKPLYVAIAQR 403
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN+ ++ +FF++ G IT A L + +GK R F F+ + +A +A++
Sbjct: 223 TNVYVKNIHPDTGDEEFEEFFTKVGPITSAHLEKDNEGKLRGFGFVNYENHNDAAKAVEE 282
Query: 61 FNKS 64
N++
Sbjct: 283 LNET 286
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + L D FS G I K+ + G SR F F+ F ++ A+EAI N
Sbjct: 132 IFIKNLHPDIDNKALHDTFSVFGNILSCKIATDEAGNSRGFGFVHFEDDEAAKEAIDAIN 191
Query: 63 KSYLD 67
L+
Sbjct: 192 GMLLN 196
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ S ++FV + Y + LRE F K+G V E +++D++T RS+G A+V Y E AS
Sbjct: 36 FMSSSKVFVGGISYQTDDTSLREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEAS 95
Query: 355 RAIEVLDNSIFQGRLLHVMPARHK 378
AI+ LD GR + V A +
Sbjct: 96 SAIQALDGQDLHGRRVRVNYANDR 119
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ S +FV ++++T D +LR+ FG++ G ++ +V + G+ S GF F+ + S
Sbjct: 37 MSSSKVFVGGISYQTDDTSLREAFGKY---GEVIEARVIIDRETGR--SRGFAFVTYTSS 91
Query: 673 ETATNVCRDLQGTILDGHALILQLCH 698
E A++ + L G L G + + +
Sbjct: 92 EEASSAIQALDGQDLHGRRVRVNYAN 117
>gi|406997918|gb|EKE15908.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 93
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L+V LPY+ TE+ L EHFS+ G V +I+ D+ + RSKG +V + E A +AIE+
Sbjct: 4 KLYVGGLPYSTTEESLGEHFSQAGAVESANIITDRMSGRSKGFGFVEMSTEEGAQKAIEM 63
Query: 360 LDNSIFQGRLLHVMPAR 376
F GR L V AR
Sbjct: 64 FHGKEFGGRTLTVNEAR 80
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKY 60
++ V LP TE+ L + FSQ G + A ++ + G+S+ F F+ TE+ A++AI+
Sbjct: 4 KLYVGGLPYSTTEESLGEHFSQAGAVESANIITDRMSGRSKGFGFVEMSTEEGAQKAIEM 63
Query: 61 FNKSYLDTCRISCEIARKV 79
F+ ++ AR +
Sbjct: 64 FHGKEFGGRTLTVNEARPL 82
>gi|76162400|gb|AAX30241.2| SJCHGC02233 protein [Schistosoma japonicum]
Length = 65
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+L++GRLFVRNLPY TE EL + FS +G++S++H+ D ++ SKG A+V Y P A
Sbjct: 1 MLQTGRLFVRNLPYDCTEKELEKLFSPYGSLSDIHLAFDSWSQVSKGFAFVTYLFPSDAV 60
Query: 355 R 355
+
Sbjct: 61 K 61
>gi|78186885|ref|YP_374928.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78166787|gb|ABB23885.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 90
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLPYT +ED+LR+ FS+FG V+ +I+ DK + RSKG +V ++A AIE +
Sbjct: 3 IYVGNLPYTISEDDLRDAFSEFGEVASANIITDKFSGRSKGFGFVEMPDDDAAREAIESM 62
Query: 361 DNSIFQGRLLHVMPARHKK 379
N F+GR + V A+ ++
Sbjct: 63 HNKDFKGRSIMVNEAKPRE 81
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIK 59
I V NLP ++ED LRD FS+ GE+ A ++ K G+S+ F F+ + A EAI+
Sbjct: 3 IYVGNLPYTISEDDLRDAFSEFGEVASANIITDKFSGRSKGFGFVEMPDDDAAREAIE 60
>gi|242823058|ref|XP_002488014.1| glycine-rich RNA-binding protein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218712935|gb|EED12360.1| glycine-rich RNA-binding protein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 134
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+LF+ L + T+D LR+ F KFG + E ++ D+DT RS+G +V +A A AI+
Sbjct: 3 KLFIGGLAWHTTDDTLRQGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFATDAEADAAIDG 62
Query: 360 LDNSIFQGRLLHVMPARHKKSS 381
++N F GR++ V A + SS
Sbjct: 63 MNNQEFDGRVIRVDRASNNASS 84
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S++ + L + T+D LR F + G I +A +++ +D +SR F F+ F T+ EA+ AI
Sbjct: 2 SKLFIGGLAWHTTDDTLRQGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFATDAEADAAID 61
Query: 60 YFNKSYLD 67
N D
Sbjct: 62 GMNNQEFD 69
>gi|320032897|gb|EFW14847.1| polyadenylate-binding protein [Coccidioides posadasii str.
Silveira]
Length = 768
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 150/378 (39%), Gaps = 81/378 (21%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L + TE L E FS G V+ + + D T+RS G AYV Y RA+
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 358 EVLDNSIFQGRLLHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQR 400
E L+ ++ +GR +M PA K D + LH++ + L
Sbjct: 114 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSC- 172
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
+ A + GN+K + + +N A KH LL+ + + IA + Q
Sbjct: 173 ----KVAQDEFGNSKGYGFVHYETAEAAQN-AIKH--VNGMLLNDKKVFVGHHIAKKDRQ 225
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
S EE A T+ VKN+ D++E E +F KFG
Sbjct: 226 ----------------SKFEEMKANFTN--------VYVKNIDQDTTEEEFRDLFEKFGE 261
Query: 521 LDKVILP------STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
+ L ++ V F AAAA + L K +KG LY+ A
Sbjct: 262 ITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRA--------- 312
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRK 634
K +++ + + +++A R + +GV +L++KNL+ DE LR+
Sbjct: 313 -QKKHEREEELRKQYEAARIEKASKYQGV-------------NLYIKNLSDDIDDEKLRE 358
Query: 635 HFGEHIKEGRILSVKVKK 652
F + G I S KV +
Sbjct: 359 LFSSY---GTITSAKVMR 373
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR-TKDGKSRQFAFIGFRTEQEAEEAIK 59
+ + VKN+ + TE+ RD F + GEIT A L R + GKSR F F+ F + A A++
Sbjct: 236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVE 295
Query: 60 YFN 62
N
Sbjct: 296 ALN 298
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK-HLKNGKNVSMGFGFIEFDSVETA 675
++F+KNL+ ++ L F G ILS KV + N K G+GF+ +++ E A
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAF---GNILSCKVAQDEFGNSK----GYGFVHYETAEAA 196
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
N + + G +L+ + + AKKD Q K E + T + V+N+
Sbjct: 197 QNAIKHVNGMLLNDKKVFVGHHIAKKDRQ-SKFEEMKANFTNVYVKNI 243
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 173/413 (41%), Gaps = 63/413 (15%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L T+ +L + FS+ G V V + D T+RS G YV + P+ A+RAI+ L
Sbjct: 38 LYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQEL 97
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ G+ + VM H+ S ++ + G +K E S + KA +
Sbjct: 98 NYIPLYGKPIRVM-YSHRDPSVRR-----SGAGNIFIKNLDE--------SIDHKALHDT 143
Query: 421 FMRPDTVVENIAR------KHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGV 474
F +V NI G SK + AN+ + + A+ + + K +
Sbjct: 144 F----SVFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPF 199
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVIL-----PST 529
+ +A KT + +V+ VKNL +++ +L FG++G + ++ +
Sbjct: 200 LRRQERDSTANKT----KFTNVY-VKNLAESTTDDDLKNAFGEYGKITSAVVMKDGDGKS 254
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH 589
K V F +AA A + L ++ EW + +K++
Sbjct: 255 KGFGFVNFENADDAARAVESLNGHKFDDK----EW---------YVGRAQKKSE----RE 297
Query: 590 DAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVK 649
R EQ L+ D + +S +L+VKNL+ DE L++ F G + S K
Sbjct: 298 TELRVRYEQNLKEAAD------KFQSSNLYVKNLDPSISDEKLKEIFSPF---GTVTSCK 348
Query: 650 VKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD 702
V +++ S G GF+ F + E AT L G +++ L + + K+D
Sbjct: 349 V---MRDPNGTSKGSGFVAFSTPEEATEAMSQLSGKMIESKPLYVAIAQRKED 398
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S + VKNL +++++L++ FS G +T K+MR +G S+ F+ F T +EA EA+
Sbjct: 318 SNLYVKNLDPSISDEKLKEIFSPFGTVTSCKVMRDPNGTSKGSGFVAFSTPEEATEAMSQ 377
Query: 61 FNKSYLDTCRISCEIARK 78
+ +++ + IA++
Sbjct: 378 LSGKMIESKPLYVAIAQR 395
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+G +F++NL + L + FS FGN+ + VD + +SKG +V YA ESA +AI
Sbjct: 123 AGNIFIKNLDESIDHKALHDTFSVFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAI 181
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSD 382
E L+ + + ++V P ++ D
Sbjct: 182 EKLNGMLLNDKQVYVGPFLRRQERD 206
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + T+D L++ F + G+IT A +M+ DGKS+ F F+ F +A A++
Sbjct: 215 TNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGDGKSKGFGFVNFENADDAARAVES 274
Query: 61 FNKSYLD 67
N D
Sbjct: 275 LNGHKFD 281
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+S L+V+NL + ++++L+E FS FG V+ ++ D + SKG +V ++ PE A+
Sbjct: 315 FQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSCKVMRDPNGT-SKGSGFVAFSTPEEATE 373
Query: 356 AIEVLDNSIFQGRLLHVMPARHKK 379
A+ L + + + L+V A+ K+
Sbjct: 374 AMSQLSGKMIESKPLYVAIAQRKE 397
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 15/116 (12%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+++VKNL T D++L+ FGE+ G+I S V +K+G S GFGF+ F++ + A
Sbjct: 216 NVYVKNLAESTTDDDLKNAFGEY---GKITSAVV---MKDGDGKSKGFGFVNFENADDAA 269
Query: 677 NVCRDLQGTILDGHALILQLCHAKKD---------EQVVKKAEKDKSSTKLLVRNV 723
L G D + K + EQ +K+A S+ L V+N+
Sbjct: 270 RAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNL 325
>gi|392409536|ref|YP_006446143.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
gi|390622672|gb|AFM23879.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
Length = 103
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL + A E ELRE F +FG+V I+ D+ T RS+G +V + E RAIE L
Sbjct: 5 IYVGNLSFNANEGELRELFEQFGSVDSAKIITDQFTGRSRGFGFVEMSNREDGLRAIENL 64
Query: 361 DNSIFQGRLLHVMPARHKKS 380
D+ F GR L V AR KK+
Sbjct: 65 DSKDFSGRSLKVNEARPKKA 84
>gi|239606561|gb|EEQ83548.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis ER-3]
Length = 744
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 10/133 (7%)
Query: 272 EDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
E G + D G+ ++SS QQ+ LFVR+LP +AT + L E+FS+ + +V
Sbjct: 26 EQQTGTVAD-GDAAASS---QQKTKSRRTLFVRSLPASATTESLTEYFSQSYPLKHATVV 81
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA--RHKKSSDKQELHNS 389
+D TK+SK +V +A E A++A+E + S+F G+ L + A RH++ +K
Sbjct: 82 LDPQTKQSKSYGFVTFADHEDAAKALEEFNGSVFDGKKLKIEVAEPRHREIDEK----GG 137
Query: 390 TSQGTKTLKQRRE 402
S T LKQ RE
Sbjct: 138 KSVSTSNLKQERE 150
Score = 45.4 bits (106), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 277 EIVDPGNPSSSSKDVQQE------VLESGRLFVRNLPYTATE-DELREHFSKFGNVSEVH 329
EI + G S S+ +++QE + +L +RNLP++ E D+L F FG V H
Sbjct: 131 EIDEKGGKSVSTSNLKQERENRKLQAQPPKLIIRNLPWSIAEPDQLAALFRSFGKVK--H 188
Query: 330 IVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
V+ K + G +V+ ++A +A+E ++ GR L V
Sbjct: 189 AVIPKRGTQHSGFGFVVLRGRKNAEKALEAVNGKEIDGRTLAV 231
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLM---RTKDGKSRQFAFIGFRTEQEAEEAIK 59
+ V++LP T + L ++FSQ + A ++ +TK KS + F+ F ++A +A++
Sbjct: 51 LFVRSLPASATTESLTEYFSQSYPLKHATVVLDPQTKQSKS--YGFVTFADHEDAAKALE 108
Query: 60 YFNKSYLDTCRISCEIA 76
FN S D ++ E+A
Sbjct: 109 EFNGSVFDGKKLKIEVA 125
>gi|119189891|ref|XP_001245552.1| hypothetical protein CIMG_04993 [Coccidioides immitis RS]
gi|121937111|sp|Q1DXH0.1|PABP_COCIM RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|392868454|gb|EAS34245.2| polyadenylate-binding protein, cytoplasmic and nuclear
[Coccidioides immitis RS]
Length = 768
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 150/378 (39%), Gaps = 81/378 (21%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L + TE L E FS G V+ + + D T+RS G AYV Y RA+
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 358 EVLDNSIFQGRLLHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQR 400
E L+ ++ +GR +M PA K D + LH++ + L
Sbjct: 114 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSC- 172
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
+ A + GN+K + + +N A KH LL+ + + IA + Q
Sbjct: 173 ----KVAQDEFGNSKGYGFVHYETAEAAQN-AIKH--VNGMLLNDKKVFVGHHIAKKDRQ 225
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
S EE A T+ VKN+ D++E E +F KFG
Sbjct: 226 ----------------SKFEEMKANFTN--------VYVKNIDQDTTEEEFRDLFEKFGE 261
Query: 521 LDKVILP------STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
+ L ++ V F AAAA + L K +KG LY+ A
Sbjct: 262 ITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRA--------- 312
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRK 634
K +++ + + +++A R + +GV +L++KNL+ DE LR+
Sbjct: 313 -QKKHEREEELRKQYEAARIEKASKYQGV-------------NLYIKNLSDDIDDEKLRE 358
Query: 635 HFGEHIKEGRILSVKVKK 652
F + G I S KV +
Sbjct: 359 LFSSY---GTITSAKVMR 373
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR-TKDGKSRQFAFIGFRTEQEAEEAIK 59
+ + VKN+ + TE+ RD F + GEIT A L R + GKSR F F+ F + A A++
Sbjct: 236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVE 295
Query: 60 YFN 62
N
Sbjct: 296 ALN 298
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK-HLKNGKNVSMGFGFIEFDSVETA 675
++F+KNL+ ++ L F G ILS KV + N K G+GF+ +++ E A
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAF---GNILSCKVAQDEFGNSK----GYGFVHYETAEAA 196
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
N + + G +L+ + + AKKD Q K E + T + V+N+
Sbjct: 197 QNAIKHVNGMLLNDKKVFVGHHIAKKDRQ-SKFEEMKANFTNVYVKNI 243
>gi|343432668|ref|NP_001230348.1| RNA binding motif (RNP1, RRM) protein 3 [Sus scrofa]
Length = 156
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESLDGRQIRV 79
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
LFV LNF T ++ L HF ++ VK ++ + S GFGFI F + E A+N
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQR-----SRGFGFITFTNPEHASN 62
Query: 678 VCRDLQGTILDGHALILQLCHAKK 701
R + G LDG +++ HA K
Sbjct: 63 AMRAMNGESLDGRQ--IRVDHAGK 84
>gi|303322729|ref|XP_003071356.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111058|gb|EER29211.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 768
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 150/378 (39%), Gaps = 81/378 (21%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L + TE L E FS G V+ + + D T+RS G AYV Y RA+
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 358 EVLDNSIFQGRLLHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQR 400
E L+ ++ +GR +M PA K D + LH++ + L
Sbjct: 114 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSC- 172
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
+ A + GN+K + + +N A KH LL+ + + IA + Q
Sbjct: 173 ----KVAQDEFGNSKGYGFVHYETAEAAQN-AIKH--VNGMLLNDKKVFVGHHIAKKDRQ 225
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
S EE A T+ VKN+ D++E E +F KFG
Sbjct: 226 ----------------SKFEEMKANFTN--------VYVKNIDQDTTEEEFRDLFEKFGE 261
Query: 521 LDKVILP------STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSS 574
+ L ++ V F AAAA + L K +KG LY+ A
Sbjct: 262 ITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRA--------- 312
Query: 575 TSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRK 634
K +++ + + +++A R + +GV +L++KNL+ DE LR+
Sbjct: 313 -QKKHEREEELRKQYEAARIEKASKYQGV-------------NLYIKNLSDDIDDEKLRE 358
Query: 635 HFGEHIKEGRILSVKVKK 652
F + G I S KV +
Sbjct: 359 LFSSY---GTITSAKVMR 373
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR-TKDGKSRQFAFIGFRTEQEAEEAIK 59
+ + VKN+ + TE+ RD F + GEIT A L R + GKSR F F+ F + A A++
Sbjct: 236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVE 295
Query: 60 YFN 62
N
Sbjct: 296 ALN 298
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK-HLKNGKNVSMGFGFIEFDSVETA 675
++F+KNL+ ++ L F G ILS KV + N K G+GF+ +++ E A
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAF---GNILSCKVAQDEFGNSK----GYGFVHYETAEAA 196
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
N + + G +L+ + + AKKD Q K E + T + V+N+
Sbjct: 197 QNAIKHVNGMLLNDKKVFVGHHIAKKDRQ-SKFEEMKANFTNVYVKNI 243
>gi|146413741|ref|XP_001482841.1| hypothetical protein PGUG_04796 [Meyerozyma guilliermondii ATCC
6260]
Length = 713
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 189/478 (39%), Gaps = 104/478 (21%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ V+++P T + L + FSQ + A ++ + G+ R F F+ F + + A+
Sbjct: 44 LFVRSVPAGTTNEELSEHFSQFVPVKHAVVVTDEKGEGRGFGFVSFTMDDDTLTALVESK 103
Query: 63 KSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEKVT 122
K + +IA+ R K E+ + + P + K EK+ +
Sbjct: 104 KVKFKGRLLRVDIAK------------RRDRKGERATRDPTEQP-HSGKTVEKRRARLIV 150
Query: 123 EN-----DDPQLLE--FLQ------VMQPRVKSKMWANDTLIGLMADQKA--KVSENISQ 167
N DP+ L+ FL+ PR K + I + A V E++
Sbjct: 151 RNLPWSCKDPETLKKTFLRFGAVFDAYIPRKKGGQMSGFAFITMKKQAAADKAVKESVGL 210
Query: 168 AIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESED 227
I G E ++ L A EKSK A E + +KD D
Sbjct: 211 KIDGREVAVDL--------------AVEKSKWEAIKEEEPKPEKEDDPEQKD------SD 250
Query: 228 DSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSS 287
D +D DD+ +EE +ND S EE + D GE +
Sbjct: 251 DEGDEDIKDDESGSDEESDND----SFEELN--------------DLKGEPEEEPEEEYK 292
Query: 288 SKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
++ Q E +FVRN+PY A +D L+EHFS+FG+V V+DK+T ++G A+V +
Sbjct: 293 PRNKQ----EPYAVFVRNIPYDADQDSLKEHFSQFGDVKYALPVIDKETGLARGSAFVAF 348
Query: 348 A-----------IPESASRAIEVLDN----SIFQGRLLHVMPARHKKSSDKQELHNSTSQ 392
P S ++ + D+ +++GR+L + A + S+ +
Sbjct: 349 VSEKPYTTCLENAPTIDSTSVLIPDDVSKEYVYEGRILSITSAVDRTSALR--------- 399
Query: 393 GTKTLKQRREEERKASEASGNTKA----WNSLFMRPDTVVENIARKHGVSKSDLLDRE 446
L ++ E +K EA G + A N + + EN +SK+DL RE
Sbjct: 400 ----LAEKNMERKK--EALGKSPADKDKRNLYLLNEGRITENSKLAQFISKTDLELRE 451
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L+ LFVR++P T +EL EHFS+F V +V D+ + +G +V + + +
Sbjct: 39 LDRKTLFVRSVPAGTTNEELSEHFSQFVPVKHAVVVTDEKGE-GRGFGFVSFTMDDDTLT 97
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ--GTKTLKQRR 401
A+ F+GRLL V A+ + ++ + T Q KT+++RR
Sbjct: 98 ALVESKKVKFKGRLLRVDIAKRRDRKGERATRDPTEQPHSGKTVEKRR 145
>gi|342882418|gb|EGU83098.1| hypothetical protein FOXB_06359 [Fusarium oxysporum Fo5176]
Length = 113
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+LFV L + T D LR FS+FG V++ ++ D++T RS+G +V ++ E AS AIE
Sbjct: 3 KLFVGGLAWATTSDTLRAKFSEFGEVTDAIVMTDRETGRSRGFGFVTFSSQEEASAAIEA 62
Query: 360 LDNSIFQGRLLHVMPA 375
++ F+GR + V A
Sbjct: 63 MNEQEFEGRQIRVSEA 78
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S++ V L T D LR FS+ GE+TDA +M ++ G+SR F F+ F +++EA AI+
Sbjct: 2 SKLFVGGLAWATTSDTLRAKFSEFGEVTDAIVMTDRETGRSRGFGFVTFSSQEEASAAIE 61
Query: 60 YFNKSYLDTCRI 71
N+ + +I
Sbjct: 62 AMNEQEFEGRQI 73
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ S ++F+ + + ++ L+E F K+GNV E I++D+DT RS+G +V Y E AS
Sbjct: 36 CMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEAS 95
Query: 355 RAIEVLDNSIFQGRLLHVMPARHK 378
AI+ +D GR + V A +
Sbjct: 96 SAIQAMDGQDLHGRRVRVNYATER 119
>gi|443895761|dbj|GAC73106.1| polyadenylate-binding protein [Pseudozyma antarctica T-34]
Length = 556
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 165/413 (39%), Gaps = 66/413 (15%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V L + TE L E F+ G V+ + + D T+RS G AYV + RA+E L
Sbjct: 48 LYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQL 107
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ S+ + R +M S + T QG +K +A + KA +
Sbjct: 108 NYSLIRNRPCRIM------WSQRDPALRRTGQGNIFIKNL--------DAGIDNKALHDT 153
Query: 421 FMRPDTVVENIARKHGVSKSDLLDR--------EANDLAVRIALGETQVIAETKKALTNA 472
F + ++ K S+S L EA D A++ G ++ KK
Sbjct: 154 FAAFGNI---LSCKVATSESGSLGYGFVHYETAEAADAAIKHVNG---MLLNDKKVYVGH 207
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP----- 527
+ +E A + R +V+ KN+ D ++ E K+F K+G + +L
Sbjct: 208 HI---PRKERQAKIEESRARFTNVY-CKNVDADVTDEEFEKLFTKYGKITSCVLQRDEDG 263
Query: 528 STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVG 587
+K V F EA A L +KG L++ A K +++ + +
Sbjct: 264 KSKGFGFVNFENHDEAQTAVDELHDSDFKGQKLFVARA----------QKKSEREEELRR 313
Query: 588 EHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS 647
++A + + +GV +L++KN+ DE LR F G I S
Sbjct: 314 SYEAAKNEKLAKFQGV-------------NLYLKNIPESYDDERLRDEFAPF---GAITS 357
Query: 648 VKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
K+ ++ VS GFGF+ + + E A ++ G +LD L + L K
Sbjct: 358 CKI---MRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALAQRK 407
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KN+P+ ++RLRD F+ G IT K+MR G SR F F+ + +EA +A+ N
Sbjct: 331 LYLKNIPESYDDERLRDEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMN 390
Query: 63 KSYLDTCRISCEIARK 78
LD + +A++
Sbjct: 391 GKMLDNRPLYVALAQR 406
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ + KN+ VT++ F++ G+IT L R +DGKS+ F F+ F EA+ A+
Sbjct: 226 TNVYCKNVDADVTDEEFEKLFTKYGKITSCVLQRDEDGKSKGFGFVNFENHDEAQTAV 283
>gi|409082274|gb|EKM82632.1| hypothetical protein AGABI1DRAFT_111221 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 671
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 185/454 (40%), Gaps = 72/454 (15%)
Query: 256 ECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDEL 315
E +++ SI V + P NP + Q S L+V L T TE L
Sbjct: 10 ESVPVVESSIPPSV-------PVPAPYNPPAP----QASTAPSASLYVGELDPTVTEAML 58
Query: 316 REHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA 375
E F+ G V+ + + D T+RS G AYV Y RA+E L+ S+ + R +M
Sbjct: 59 FEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLIKNRACRIM-- 116
Query: 376 RHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVE-NIAR- 433
S + T QG +K E + + KA + F+ V+ +A
Sbjct: 117 ----WSQRDPALRKTGQGNVFIKNLDE--------AIDNKALHDTFVAFGNVLSCKVATD 164
Query: 434 KHGVSKSDLL----DREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDG 489
+HG SK EA D A++ G ++ KK G ++S E S K D
Sbjct: 165 EHGRSKGYGFVHYETAEAADNAIKSVNG---MLLNDKKVYV--GHHISRKERQS--KLDE 217
Query: 490 LKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAA 544
+K +KNL + ++ E ++F ++G++ ++ + +K V + EA
Sbjct: 218 MKAQFTNLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHEEAQ 277
Query: 545 AAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVT 604
A L KG L++ A K ++ D + +R+ + +LE ++
Sbjct: 278 RAVDELHDTDLKGKKLFVARA----------QKKAERED------ELRRSYEQAKLEKLS 321
Query: 605 DADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGF 664
+ + +L++KNL D+ LR F G I S KV +++ K S GF
Sbjct: 322 -------KYQGINLYIKNLEDDFDDDKLRAEFEPF---GAITSCKV---MRDEKGTSKGF 368
Query: 665 GFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
GF+ F S + AT ++ ++ L + L
Sbjct: 369 GFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQ 402
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL +D+LR F G IT K+MR + G S+ F F+ F + EA +A+ N
Sbjct: 328 LYIKNLEDDFDDDKLRAEFEPFGAITSCKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMN 387
Query: 63 KSYLDTCRISCEIARK 78
+ T + +A++
Sbjct: 388 NKMIGTKPLYVSLAQR 403
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 35/58 (60%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ + +KNL VT++ + F++ G +T + + ++GKS+ F F+ + +EA+ A+
Sbjct: 223 TNLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHEEAQRAV 280
>gi|58262518|ref|XP_568669.1| hypothetical protein CNN01920 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134119018|ref|XP_772011.1| hypothetical protein CNBN1890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254615|gb|EAL17364.1| hypothetical protein CNBN1890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230843|gb|AAW47152.1| hypothetical protein CNN01920 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 942
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 112/266 (42%), Gaps = 62/266 (23%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFV +LPYTAT +L HFS G V + D+++ +SKG+ YV +++ E A RAI+ L
Sbjct: 26 LFVSSLPYTATTTDLLTHFSYIGPVRHGFVATDRESGKSKGVGYVTFSLKEDADRAIQEL 85
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT------ 414
D F G K+++ + +LK R+ E + + G T
Sbjct: 86 DGGSFGG--------------SKRKIQVKWADERASLKDRKAEIKVSKPIPGQTDNKSTD 131
Query: 415 -KAWNSLFMR--PDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ----------- 460
KA +L + P + +N+ K R+ ND A + E Q
Sbjct: 132 PKAIQTLVLTGLPSDITKNVLWKK--------IRKVNDKAELVFPVEAQENEEEAPKDTA 183
Query: 461 ----------------VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHV--FLVKNL 502
+ T K + V LE+ SA K +G K +H +++NL
Sbjct: 184 HIVFPSHGDALKALPKLHGHTYKGNILSCVLKKRLEKLSA-KGEG-KAPSHAGRLIIRNL 241
Query: 503 PYDSSEGELAKMFGKFGSLDKVILPS 528
+D++ +L K F +G + + LP+
Sbjct: 242 SWDTTIQDLRKAFLPYGPIHSIDLPT 267
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 73/172 (42%), Gaps = 29/172 (16%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY--------AIPES 352
LF+RNLP+ TE EL F FG + I +DK T RS+G +V + I E+
Sbjct: 422 LFIRNLPFETTELELNTLFRSFGPLRYAKITIDKATGRSRGTGFVCFWKNEHADEVIEEA 481
Query: 353 ASRAIEVLDNSIFQG-----------RLLHVMPARHKKSSDKQELHNSTSQGTK-----T 396
A+E NSI G LL P+ S + LH T T+ T
Sbjct: 482 QRVAMETGANSIPLGGAAPKNPFALPSLLTADPSSSLAS--RLVLHGRTLDITRAVTRET 539
Query: 397 LKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREAN 448
Q +E+ + A+ N+ MR + N G+ +S++ R+A+
Sbjct: 540 ASQMKEDTERLRNAADKR---NTYLMREGVIFPNSPAAEGLPESEIEKRQAS 588
>gi|302794650|ref|XP_002979089.1| hypothetical protein SELMODRAFT_418785 [Selaginella moellendorffii]
gi|300153407|gb|EFJ20046.1| hypothetical protein SELMODRAFT_418785 [Selaginella moellendorffii]
Length = 330
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 33/137 (24%)
Query: 441 DLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVK 500
LD EA D+A R+ALGE V++ETK++L GV G G +H LVK
Sbjct: 99 SFLDPEAEDVAERLALGERHVLSETKRSLAQQGVK-------PCGDAGG----DHALLVK 147
Query: 501 NLPYDSSEGELAKMFGKFGSLDKVILPSTK-----TLALVVFLEPVEAAAAFKGLAYKRY 555
NLP+ ++E E +++ LP TK + +L++ L EAA LAY+++
Sbjct: 148 NLPFSTTEAE-----------ERLELPPTKEFSSSSCSLLIALSSSEAAKPSSSLAYRKF 196
Query: 556 KGVPLYLEWAPSDVLSQ 572
KG +P D+LS+
Sbjct: 197 KGT------SPQDLLSE 207
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ G+LFV L + TE L E FSK+GN+S+ +++D++T R +G +V Y PE A A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 357 IEVLDNSIFQGRLLHVMPA 375
++ ++ GR + V A
Sbjct: 63 MDAMNGQSLDGRTIRVNEA 81
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ G+LFV L + TE L E FSK+GN+S+ +++D++T R +G +V Y PE A A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 357 IEVLDNSIFQGRLLHVMPA 375
++ ++ GR + V A
Sbjct: 63 MDAMNGQSLDGRTIRVNEA 81
>gi|125533975|gb|EAY80523.1| hypothetical protein OsI_35702 [Oryza sativa Indica Group]
Length = 468
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 109/254 (42%), Gaps = 25/254 (9%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+F+ LP TE++LRE FG + EV ++ DK+TK +KG A+V + ++A RAIE L
Sbjct: 109 VFIGGLPRDTTEEDLRELCDSFGEIYEVRLMKDKETKENKGFAFVNFTAKDAAQRAIEEL 168
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ +GR L R S K L K L + EE RK + G +
Sbjct: 169 HDKEHKGRTL-----RCSLSQAKHRLFVGNV--PKGLGE--EELRKIIQGKGPGVVNIEM 219
Query: 421 FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLE 480
F + + +R G + + D A Q ++ + + + VS E
Sbjct: 220 FKD----LHDPSRNRGFLFVEYYNHACADYA-------RQKLSAPNFKVDGSQLTVSWAE 268
Query: 481 EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTK-----TLALV 535
+ + VKNLP ++S+ ++ ++F K G + KV+LP K V
Sbjct: 269 PKGSSDSSSAAAQVKTIYVKNLPENASKEKIKEIFEKHGEVTKVVLPPAKDGHKRDFGFV 328
Query: 536 VFLEPVEAAAAFKG 549
F E A A KG
Sbjct: 329 HFAERSSALKAVKG 342
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I VKNLP+ +++++++ F + GE+T L KDG R F F+ F A +A+K
Sbjct: 285 IYVKNLPENASKEKIKEIFEKHGEVTKVVLPPAKDGHKRDFGFVHFAERSSALKAVKGSE 344
Query: 63 KSYLDTCRISCEIARKVGD------------PNMPRP 87
K D + +A+ +GD PN P P
Sbjct: 345 KYEFDGQVLEVSMAKPLGDKKPDHSFKPAGAPNFPLP 381
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V+NLP A++++++E F K G V++V + KD + + +V +A SA +A++
Sbjct: 285 IYVKNLPENASKEKIKEIFEKHGEVTKVVLPPAKDGHK-RDFGFVHFAERSSALKAVKGS 343
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTL 397
+ F G++L V A K DK+ H+ G
Sbjct: 344 EKYEFDGQVLEVSMA--KPLGDKKPDHSFKPAGAPNF 378
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAI 58
S + + LP+ TE+ LR+ GEI + +LM+ K+ K ++ FAF+ F + A+ AI
Sbjct: 107 SEVFIGGLPRDTTEEDLRELCDSFGEIYEVRLMKDKETKENKGFAFVNFTAKDAAQRAI 165
>gi|171681916|ref|XP_001905901.1| hypothetical protein [Podospora anserina S mat+]
gi|170940917|emb|CAP66567.1| unnamed protein product [Podospora anserina S mat+]
Length = 804
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 117/510 (22%), Positives = 191/510 (37%), Gaps = 126/510 (24%)
Query: 250 NGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYT 309
NG N +I + ED G P P+S++ Q S L+V L +
Sbjct: 72 NGGENRNAPAIDTNVAAGQFQNEDQEG--AGP-TPNSAAPHPQ----SSASLYVGELDPS 124
Query: 310 ATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRL 369
TE L E FS+ G+V+ + + D T+RS G AYV Y +A+E L+ ++ +GR
Sbjct: 125 VTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNATADGEKALEDLNYTLIKGRP 184
Query: 370 LHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQRREEERKASEASG 412
+M PA K D + LH++ + L + A + +G
Sbjct: 185 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK-----VAQDENG 239
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNA 472
N+K + + D N A KH LL+ + + I + Q
Sbjct: 240 NSKGYGFVHYETDEAAAN-AIKH--VNGMLLNEKKVYVGYHIPKKDRQ------------ 284
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP----- 527
S EE A T+ VKN+P + ++ E ++F K+G + L
Sbjct: 285 ----SKFEEMKANFTN--------VYVKNIPAEVTDEEFRELFAKYGDVTSSSLARSDEG 332
Query: 528 STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVG 587
++ V F A+ A + L K ++G LY+ A K +++ + +
Sbjct: 333 KSRGFGFVNFTTHEAASKAVEELNGKDFRGQELYVGRA----------QKKHEREEELRR 382
Query: 588 EHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS 647
++A R + +GV +L++KNL D+ LR+ F E+ G I S
Sbjct: 383 SYEAARQEKANKYQGV-------------NLYIKNLGDDVDDDKLRQMFSEY---GPITS 426
Query: 648 VKV-------------------------------------KKHLKNGKNVSMGFGFIEFD 670
KV K+ K GK S GFGF+ F
Sbjct: 427 AKVMRDSVVESAAEDEKDKENKKEDEEEKEGETAEKKAETKEKRKLGK--SKGFGFVCFS 484
Query: 671 SVETATNVCRDLQGTILDGHALILQLCHAK 700
+ + AT ++ ++D L + L K
Sbjct: 485 NPDDATKAVTEMNQRMIDNKPLYVALAQRK 514
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 41/62 (66%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN+P VT++ R+ F++ G++T + L R+ +GKSR F F+ F T + A +A++
Sbjct: 295 TNVYVKNIPAEVTDEEFRELFAKYGDVTSSSLARSDEGKSRGFGFVNFTTHEAASKAVEE 354
Query: 61 FN 62
N
Sbjct: 355 LN 356
>gi|88813641|ref|ZP_01128871.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88789097|gb|EAR20234.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 96
Score = 67.4 bits (163), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP+TA+EDE+R+ F+++G V+EV ++ D+DT R +G +V A P A AIE L
Sbjct: 5 IYVGNLPFTASEDEIRDLFAQYGEVNEVRLITDRDTGRPRGFGFVRMA-PADADAAIEAL 63
Query: 361 DNSIFQGRLLHVMPARHKK 379
+ + GR L + A+ ++
Sbjct: 64 NGTELDGRALRINEAQERQ 82
Score = 45.8 bits (107), Expect = 0.082, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKYF 61
I V NLP +ED +RD F+Q GE+ + +L+ +D G+ R F F+ +A+ AI+
Sbjct: 5 IYVGNLPFTASEDEIRDLFAQYGEVNEVRLITDRDTGRPRGFGFVRM-APADADAAIEAL 63
Query: 62 NKSYLD--TCRISCEIARKVGDPNMP 85
N + LD RI+ R+ P P
Sbjct: 64 NGTELDGRALRINEAQERQERRPRQP 89
>gi|226506948|ref|NP_001149776.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195633803|gb|ACG36746.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 276
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 285 SSSSKDVQQEV-LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
+SS+ V Q + S +LFV + Y + LR+ F+K+G V E I++D+++ RS+G
Sbjct: 15 TSSNLSVYQAIRCMSSKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFG 74
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHK 378
+V Y E AS AI LD GR + V A K
Sbjct: 75 FVTYTSSEEASAAITALDGKTLDGRSIRVNHANEK 109
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
R S LFV ++++T D +LR F ++ G+++ ++ ++G+ S GFGF+ + S
Sbjct: 26 RCMSSKLFVGGISYQTDDHSLRDEFAKY---GQVIEARIIIDRESGR--SRGFGFVTYTS 80
Query: 672 VETATNVCRDLQGTILDGHAL 692
E A+ L G LDG ++
Sbjct: 81 SEEASAAITALDGKTLDGRSI 101
>gi|426200105|gb|EKV50029.1| hypothetical protein AGABI2DRAFT_190442 [Agaricus bisporus var.
bisporus H97]
Length = 673
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 185/454 (40%), Gaps = 72/454 (15%)
Query: 256 ECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDEL 315
E +++ SI V + P NP + Q S L+V L T TE L
Sbjct: 10 ESVPVVESSIPPSV-------PVPAPYNPPAP----QASTAPSASLYVGELDPTVTEAML 58
Query: 316 REHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA 375
E F+ G V+ + + D T+RS G AYV Y RA+E L+ S+ + R +M
Sbjct: 59 FEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLIKNRACRIM-- 116
Query: 376 RHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVE-NIAR- 433
S + T QG +K E + + KA + F+ V+ +A
Sbjct: 117 ----WSQRDPALRKTGQGNVFIKNLDE--------AIDNKALHDTFVAFGNVLSCKVATD 164
Query: 434 KHGVSKSDLL----DREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDG 489
+HG SK EA D A++ G ++ KK G ++S E S K D
Sbjct: 165 EHGRSKGYGFVHYETAEAADNAIKSVNG---MLLNDKKVYV--GHHISRKERQS--KLDE 217
Query: 490 LKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAA 544
+K +KNL + ++ E ++F ++G++ ++ + +K V + EA
Sbjct: 218 MKAQFTNLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHEEAQ 277
Query: 545 AAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVT 604
A L KG L++ A K ++ D + +R+ + +LE ++
Sbjct: 278 RAVDELHDTDLKGKKLFVARA----------QKKAERED------ELRRSYEQAKLEKLS 321
Query: 605 DADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGF 664
+ + +L++KNL D+ LR F G I S KV +++ K S GF
Sbjct: 322 -------KYQGVNLYIKNLEDDFDDDKLRAEFEPF---GAITSCKV---MRDEKGTSKGF 368
Query: 665 GFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
GF+ F S + AT ++ ++ L + L
Sbjct: 369 GFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQ 402
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL +D+LR F G IT K+MR + G S+ F F+ F + EA +A+ N
Sbjct: 328 LYIKNLEDDFDDDKLRAEFEPFGAITSCKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMN 387
Query: 63 KSYLDTCRISCEIARK 78
+ T + +A++
Sbjct: 388 NKMIGTKPLYVSLAQR 403
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 35/58 (60%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ + +KNL VT++ + F++ G +T + + ++GKS+ F F+ + +EA+ A+
Sbjct: 223 TNLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHEEAQRAV 280
>gi|323508056|emb|CBQ67927.1| related to Nucleolar protein NOP4 [Sporisorium reilianum SRZ2]
Length = 1039
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LF+ LPYTAT +L+ FS+ G + +V D+ TK+SKG+ YV +AIPE A+ A+E L
Sbjct: 47 LFISRLPYTATSTDLQTTFSEIGPLKRAFVVTDQATKKSKGVGYVTFAIPEDANTALEQL 106
Query: 361 DNSIFQG 367
G
Sbjct: 107 QGKSLDG 113
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 36/61 (59%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E LFVRNLPY ATE+ELR F FG + I +DK T RSKG +V + SA A
Sbjct: 570 EGTTLFVRNLPYQATEEELRNLFRTFGPLRYAKITMDKTTNRSKGTGFVCFWQSSSADAA 629
Query: 357 I 357
+
Sbjct: 630 L 630
>gi|328875985|gb|EGG24349.1| hypothetical protein DFA_06499 [Dictyostelium fasciculatum]
Length = 97
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 46/64 (71%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ + R+FV LP++ + LR HFSKFG++++ ++V+D+ T+RSKG +V Y+ ESA +
Sbjct: 1 MSNNRIFVARLPWSVCKIALRNHFSKFGSITDGYVVLDRITRRSKGYGFVTYSTNESAQQ 60
Query: 356 AIEV 359
AI V
Sbjct: 61 AIAV 64
>gi|239615396|gb|EEQ92383.1| polyadenylate-binding protein [Ajellomyces dermatitidis ER-3]
gi|327356743|gb|EGE85600.1| polyadenylate-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 783
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 185/493 (37%), Gaps = 140/493 (28%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
P+S++ Q S L+V L + TE L E FS G V+ + + D T+RS G A
Sbjct: 42 PNSAAPSTTQP--HSASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYA 99
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREE 403
YV Y RA+E L+ ++ +G+ +M QR
Sbjct: 100 YVNYNNTADGERALEDLNYTLIKGKPCRIM-----------------------WSQRDPA 136
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIA---LGETQ 460
RK T N DT ++N A D N L+ ++A G ++
Sbjct: 137 LRK-------TGQGNVFIKNLDTAIDNKALH------DTFAAFGNILSCKVAQDEFGNSK 183
Query: 461 ----VIAETKKALTNAGVNVSSL----EEFSAG----------KTDGLKRSNHVFLVKNL 502
V ET +A TNA +V+ + ++ G K + +K + VKNL
Sbjct: 184 GYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNL 243
Query: 503 PYDSSEGELAKMFGKFGSLDKVILP------STKTLALVVFLEPVEAAAAFKGLAYKRYK 556
+ + E ++FGK+G + + ++ V F++ AAAA + L K +K
Sbjct: 244 DTEVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAAVEELNDKEFK 303
Query: 557 GVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESR 616
G LY+ A K +++ + + +H+A R + +GV
Sbjct: 304 GQKLYVGRA----------QKKHEREEELRKQHEAARVEKASKYQGV------------- 340
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV--------------KKHLKNGKNV-- 660
+L+VKNL DE LR F I G I S +V +K + N +NV
Sbjct: 341 NLYVKNLTDDIDDEKLRDLF---IGFGNITSARVMRDTIADAGSESEKEKEISNKENVKE 397
Query: 661 ---------------------------------SMGFGFIEFDSVETATNVCRDLQGTIL 687
S GFGF+ F + + A+ ++ ++
Sbjct: 398 EAKKESAEEESSDKSDKAEKSDSKKTLEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMV 457
Query: 688 DGHALILQLCHAK 700
+G L + L K
Sbjct: 458 NGKPLYVALAQRK 470
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK-HLKNGKNVSMGFGFIEFDSVETA 675
++F+KNL+ ++ L F G ILS KV + N K G+GF+ +++ E A
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAF---GNILSCKVAQDEFGNSK----GYGFVHYETAEAA 196
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
TN + + G +L+ + + AKKD Q K E + T + V+N+
Sbjct: 197 TNAIKHVNGMLLNEKKVFVGHHIAKKDRQ-SKFEEMKANFTNVYVKNL 243
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR-TKDGKSRQFAFIGFRTEQEAEEAIK 59
+ + VKNL VT + R+ F + G+IT A + ++ GKSR F F+ F + A A++
Sbjct: 236 TNVYVKNLDTEVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAAVE 295
Query: 60 YFN 62
N
Sbjct: 296 ELN 298
>gi|428185150|gb|EKX54003.1| hypothetical protein GUITHDRAFT_132430 [Guillardia theta CCMP2712]
Length = 162
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 57/92 (61%)
Query: 287 SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
S+ +Q + + +LFV +P+ + ++LRE F KFG V + ++V D++T RS+G A++
Sbjct: 47 STTSMQMDKINDKKLFVSGIPFALSSEDLRETFEKFGPVEDSYVVKDRETGRSRGFAFIT 106
Query: 347 YAIPESASRAIEVLDNSIFQGRLLHVMPARHK 378
++ E+AS+A L+ S GR + V A+ +
Sbjct: 107 FSSKEAASQACSALNESDLGGRTVKVSFAKDR 138
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 611 DRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFD 670
D++ + LFV + F E+LR+ F K G + V K + G+ S GF FI F
Sbjct: 54 DKINDKKLFVSGIPFALSSEDLRETFE---KFGPVEDSYVVKDRETGR--SRGFAFITFS 108
Query: 671 SVETATNVCRDLQGTILDGHALILQLCHAKKDE 703
S E A+ C L + L G + + + D+
Sbjct: 109 SKEAASQACSALNESDLGGRTVKVSFAKDRDDQ 141
>gi|327279534|ref|XP_003224511.1| PREDICTED: putative RNA-binding protein 3-like isoform 2 [Anolis
carolinensis]
Length = 231
Score = 67.4 bits (163), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 284 PSSSSKDVQQEVL-----ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
P S KD++ ++ E G+LFV L + E L +HFS FG +SEV ++ DK+T+R
Sbjct: 65 PGSFQKDMRILLITIMSSEEGKLFVGGLNFDTDEQGLEQHFSSFGPISEVVVIKDKETQR 124
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
S+G ++ +A PE AS A+ ++ GR + V
Sbjct: 125 SRGFGFITFANPEHASDAMRAMNGESVDGRQIRV 158
Score = 43.1 bits (100), Expect = 0.52, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L +HF ++ +K K+ + S GFGFI F + E
Sbjct: 83 EEGKLFVGGLNFDTDEQGLEQHFSSFGPISEVVVIKDKETQR-----SRGFGFITFANPE 137
Query: 674 TATNVCRDLQGTILDGHALILQLCHAKK 701
A++ R + G +DG +++ HA K
Sbjct: 138 HASDAMRAMNGESVDGRQ--IRVDHAGK 163
>gi|190348274|gb|EDK40698.2| hypothetical protein PGUG_04796 [Meyerozyma guilliermondii ATCC
6260]
Length = 713
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 186/478 (38%), Gaps = 104/478 (21%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ V+++P T + L + FSQ + A ++ + G+ R F F+ F + + A+
Sbjct: 44 LFVRSVPAGTTNEELSEHFSQFVPVKHAVVVTDEKGEGRGFGFVSFTMDDDTLTALVESK 103
Query: 63 KSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEKVT 122
K + +IA+ R K E+ + + P + K EK+ +
Sbjct: 104 KVKFKGRLLRVDIAK------------RRDRKGERATRDPTEQP-HSGKTVEKRRARLIV 150
Query: 123 EN-----DDPQLLE--------FLQVMQPRVKSKMWANDTLIGLMADQKA--KVSENISQ 167
N DP+ L+ PR K + I + A V E++
Sbjct: 151 RNLPWSCKDPETLKKTFSRFGAVFDAYIPRKKGGQMSGFAFITMKKQAAADKAVKESVGL 210
Query: 168 AIKGGEKSITLHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESED 227
I G E ++ L A EKSK A E + +KD D
Sbjct: 211 KIDGREVAVDL--------------AVEKSKWEAIKEEEPKPEKEDDPEQKD------SD 250
Query: 228 DSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSS 287
D +D DD+ +EE +ND S EE + D GE +
Sbjct: 251 DEGDEDIKDDESGSDEESDND----SFEELN--------------DLKGEPEEEPEEEYK 292
Query: 288 SKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
++ Q E +FVRN+PY A +D L+EHFS+FG+V V+DK+T ++G A+V +
Sbjct: 293 PRNKQ----EPYAVFVRNIPYDADQDSLKEHFSQFGDVKYALPVIDKETGLARGSAFVAF 348
Query: 348 A-----------IPESASRAIEVLDN----SIFQGRLLHVMPARHKKSSDKQELHNSTSQ 392
P S ++ + D+ +++GR+L + A + S+ +
Sbjct: 349 VSEKPYTTCLENAPTIDSTSVLIPDDVSKEYVYEGRILSITSAVDRTSASR--------- 399
Query: 393 GTKTLKQRREEERKASEASGNTKA----WNSLFMRPDTVVENIARKHGVSKSDLLDRE 446
L ++ E +K EA G + A N + + EN +SK+DL RE
Sbjct: 400 ----LAEKNMERKK--EALGKSPADKDKRNLYLLNEGRITENSKLAQFISKTDLELRE 451
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L+ LFVR++P T +EL EHFS+F V +V D+ + +G +V + + +
Sbjct: 39 LDRKTLFVRSVPAGTTNEELSEHFSQFVPVKHAVVVTDEKGE-GRGFGFVSFTMDDDTLT 97
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ--GTKTLKQRR 401
A+ F+GRLL V A+ + ++ + T Q KT+++RR
Sbjct: 98 ALVESKKVKFKGRLLRVDIAKRRDRKGERATRDPTEQPHSGKTVEKRR 145
>gi|21554348|gb|AAM63455.1| unknown [Arabidopsis thaliana]
Length = 152
Score = 67.4 bits (163), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 54/82 (65%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ ++ VRNLP++ +ED L+ FS FG ++EV ++ D+ +RSKG A++ + + A AI
Sbjct: 39 ASKIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMQRSKGYAFIQFTSQDDAFLAI 98
Query: 358 EVLDNSIFQGRLLHVMPARHKK 379
E +D ++ GR++++ A+ K
Sbjct: 99 ETMDRRMYNGRMIYIDIAKPGK 120
Score = 43.9 bits (102), Expect = 0.30, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S+I V+NLP +ED L+ FS GEI + KL++ + +S+ +AFI F ++ +A AI+
Sbjct: 40 SKIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMQRSKGYAFIQFTSQDDAFLAIE 99
Query: 60 YFNKSYLDTCRISCEIAR 77
++ + I +IA+
Sbjct: 100 TMDRRMYNGRMIYIDIAK 117
>gi|241812106|ref|XP_002414600.1| splicing factor SC35, putative [Ixodes scapularis]
gi|215508811|gb|EEC18265.1| splicing factor SC35, putative [Ixodes scapularis]
Length = 221
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLPY T ++L + F K+G V++V ++ DK T +SKG+A+VL+ +SA+R + L
Sbjct: 12 VYVSNLPYKLTNNDLHQLFEKYGKVAKVTVMKDKQTWKSKGVAFVLFVDGDSAARCVAAL 71
Query: 361 DNSIFQGRLLHVMPARH 377
D GR L A++
Sbjct: 72 DQQQLMGRTLRASIAKY 88
>gi|166365958|ref|YP_001658231.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|425466552|ref|ZP_18845850.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
gi|166088331|dbj|BAG03039.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|389830907|emb|CCI26790.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
Length = 98
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP+ +D++ E F ++G + VH+ +D++TKR +G A+V PE ++AI L
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFVEMETPEQEAKAIAAL 62
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRR 401
D + + GR L V AR K E +S G ++RR
Sbjct: 63 DGAQWMGRELKVNQAREK------EPRSSFGAGGDRNRERR 97
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+LF+ + Y+ E LRE FSK+G V + I++D++T RS+G ++ Y E AS AI+
Sbjct: 43 KLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQA 102
Query: 360 LDNSIFQGRLLHVMPARHK 378
LD GR + V A +
Sbjct: 103 LDGQDLHGRPIRVNYANER 121
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
LF+ +++ T +++LR+ F K G ++ ++ + G+ S GFGFI + SVE A++
Sbjct: 44 LFIGGVSYSTDEQSLREAF---SKYGEVVDARIIMDRETGR--SRGFGFITYTSVEEASS 98
Query: 678 VCRDLQGTILDGHALILQLCH 698
+ L G L G + + +
Sbjct: 99 AIQALDGQDLHGRPIRVNYAN 119
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIK 59
+++ + + E LR+ FS+ GE+ DA++ M + G+SR F FI + + +EA AI+
Sbjct: 42 TKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQ 101
>gi|345887600|ref|ZP_08838771.1| hypothetical protein HMPREF0178_01545 [Bilophila sp. 4_1_30]
gi|345041635|gb|EGW45774.1| hypothetical protein HMPREF0178_01545 [Bilophila sp. 4_1_30]
Length = 106
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V NLP++ATED++R+ F+ +G V+ V +V D++T R++G +V A E A+E L
Sbjct: 21 LYVGNLPWSATEDDVRDLFAPYGEVTSVKLVSDRETGRARGFGFVEMA-SEGVQAAVEAL 79
Query: 361 DNSIFQGRLLHVMPARHKKS 380
DN F GR L V AR +++
Sbjct: 80 DNFSFSGRNLKVNEARPREA 99
Score = 44.7 bits (104), Expect = 0.17, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 5 VKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTE--QEAEEAIKYF 61
V NLP TED +RD F+ GE+T KL+ ++ G++R F F+ +E Q A EA+ F
Sbjct: 23 VGNLPWSATEDDVRDLFAPYGEVTSVKLVSDRETGRARGFGFVEMASEGVQAAVEALDNF 82
Query: 62 NKS 64
+ S
Sbjct: 83 SFS 85
>gi|68468953|ref|XP_721535.1| hypothetical protein CaO19.3037 [Candida albicans SC5314]
gi|68469502|ref|XP_721264.1| hypothetical protein CaO19.10555 [Candida albicans SC5314]
gi|74680286|sp|Q5AI15.1|PABP_CANAL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|46443173|gb|EAL02457.1| hypothetical protein CaO19.10555 [Candida albicans SC5314]
gi|46443455|gb|EAL02737.1| hypothetical protein CaO19.3037 [Candida albicans SC5314]
gi|238879187|gb|EEQ42825.1| polyadenylate-binding protein [Candida albicans WO-1]
Length = 629
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 180/452 (39%), Gaps = 90/452 (19%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L + E L E FS G VS + + D +K+S G AYV Y E +AI
Sbjct: 51 SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKYEDGEKAI 110
Query: 358 EVLDNSIFQGRLLHVMPARHKKSS-----------------DKQELHNSTSQGTKTLKQR 400
E L+ + +GR +M ++ S+ D + LH++ S K L
Sbjct: 111 EELNYNPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSC- 169
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
+ A++ G +K + F+ +T A V+ L DRE + +G+
Sbjct: 170 ----KVATDEFGQSKCFG--FVHYETAEAAEAAIENVNGMLLNDRE-------VFVGKH- 215
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
I++ + S EE A T+ VKN+ + SE K+F FG
Sbjct: 216 -ISKKDRE--------SKFEEMKANFTN--------IYVKNIDLNYSEESFEKLFSPFGK 258
Query: 521 LDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
+ + L +K V F + A A + L K G +Y
Sbjct: 259 ITSIYLEKDQDGKSKGFGFVNFEDHESAVKAVEELNDKEINGQKIY-------------- 304
Query: 576 SKGNQKNDAVVGEHDAKRALLEQ---QLEGVTDADIDPDRVESRSLFVKNLNFKTCDENL 632
VG KR LE+ Q E V + + + +LFVKNL+ E L
Sbjct: 305 ----------VGRAQKKRERLEELKKQYEAVRLEKL--AKYQGVNLFVKNLDDTIDSEKL 352
Query: 633 RKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHAL 692
+ F G I S KV + + S GFGF+ F + E AT ++ +++G L
Sbjct: 353 EEEFKPF---GTITSAKV---MVDEAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPL 406
Query: 693 ILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVA 724
+ L +KD + + ++ ++ ++ ++N A
Sbjct: 407 YVALAQ-RKDVRRSQLEQQIQARNQMRMQNAA 437
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ++L + F G IT AK+M + GKS+ F F+ F T +EA +AI N
Sbjct: 338 LFVKNLDDTIDSEKLEEEFKPFGTITSAKVMVDEAGKSKGFGFVCFTTPEEATKAITEMN 397
Query: 63 KSYLDTCRISCEIARK 78
++ + +A++
Sbjct: 398 TRMINGKPLYVALAQR 413
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I VKN+ +E+ FS G+IT L + +DGKS+ F F+ F + A +A++
Sbjct: 233 TNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQDGKSKGFGFVNFEDHESAVKAVEE 292
Query: 61 FNKSYLDTCRISCEIARK 78
N ++ +I A+K
Sbjct: 293 LNDKEINGQKIYVGRAQK 310
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640298|gb|ACG39617.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 286 SSSKDVQQEV--LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
SS+ V Q + + S +LFV L Y + LR+ F+K+G V E I++D+++ RS+G
Sbjct: 19 SSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFG 78
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHK 378
++ Y E AS AI +D GR + V A +
Sbjct: 79 FITYTSSEEASAAITAMDGKTLDGRNIRVNHANER 113
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ S LFV L++ T D +LR F K G+++ K+ ++G+ S GFGFI + S
Sbjct: 31 MSSSKLFVGGLSYGTDDHSLRDEF---AKYGQVIEAKIILDRESGR--SRGFGFITYTSS 85
Query: 673 ETATNVCRDLQGTILDGHALILQLCHA 699
E A+ + G LDG +++ HA
Sbjct: 86 EEASAAITAMDGKTLDGRN--IRVNHA 110
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 1 SRICVKNLPKYVTEDR-LRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAI 58
S++ V L Y T+D LRD F++ G++ +AK++ ++ G+SR F FI + + +EA AI
Sbjct: 34 SKLFVGGL-SYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAI 92
Query: 59 KYFNKSYLDTCRI 71
+ LD I
Sbjct: 93 TAMDGKTLDGRNI 105
>gi|209734900|gb|ACI68319.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|303657347|gb|ADM15872.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 114
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ G+LFV L + TE L E FSK+GN+S+ +++D++T R +G +V Y PE A A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 357 IEVLDNSIFQGRLLHVMPA 375
++ ++ GR + V A
Sbjct: 63 MDAMNGQSLDGRTIRVNEA 81
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ G+LFV L + TE L E FSK+GN+S+ +++D++T R +G +V Y PE A A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 357 IEVLDNSIFQGRLLHVMPA 375
++ ++ GR + V A
Sbjct: 63 MDAMNGQSLDGRTIRVNEA 81
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ S +LFV L Y E L+E FS++G+V E +++D+DT RS+G ++ + E A+
Sbjct: 37 MSSSKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAAS 96
Query: 356 AIEVLDNSIFQGRLLHVMPARHKK 379
A++ +D GR + V A K+
Sbjct: 97 ALQAMDGQDLHGRRIRVNYATEKR 120
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S++ V L E L++ FSQ G++ +A+++ +D G+SR F FI F + +EA A++
Sbjct: 40 SKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQ 99
Query: 60 YFNKSYLDTCRISCEIA 76
+ L RI A
Sbjct: 100 AMDGQDLHGRRIRVNYA 116
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ S LFV L++ T + +L++ F ++ G ++ +V G+ S GFGFI F S
Sbjct: 37 MSSSKLFVGGLSYGTDESSLKEAFSQY---GDVIEARVIMDRDTGR--SRGFGFISFPSS 91
Query: 673 ETATNVCRDLQGTILDGHALILQLCHAKK 701
E A + + + G L G + + K+
Sbjct: 92 EEAASALQAMDGQDLHGRRIRVNYATEKR 120
>gi|449550073|gb|EMD41038.1| hypothetical protein CERSUDRAFT_62981 [Ceriporiopsis subvermispora
B]
Length = 195
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 272 EDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIV 331
E + E D G P + +D + +S +FV N+ Y+AT +E++ HF G ++ V I+
Sbjct: 57 ERSGSEPGDTGVPMETEED--KAAADSRSIFVGNVDYSATPEEIQVHFQSCGVINRVTIL 114
Query: 332 VDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
DK T KG AYV +A PE A +DNS+F+GRL+ V R
Sbjct: 115 CDKFTGHPKGYAYVEFAEPEHVDAAT-AMDNSLFRGRLIKVTAKR 158
>gi|367000057|ref|XP_003684764.1| hypothetical protein TPHA_0C01740 [Tetrapisispora phaffii CBS 4417]
gi|357523061|emb|CCE62330.1| hypothetical protein TPHA_0C01740 [Tetrapisispora phaffii CBS 4417]
Length = 697
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL----- 346
QQ E +F+RN+PY ATE+ L EHF+KFG+V V+D++T +KG A+V
Sbjct: 298 QQNRQEDYSVFIRNVPYDATEESLAEHFTKFGDVKYALPVIDRNTGLAKGTAFVAFKDQK 357
Query: 347 ---YAI---PESASRAI----EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKT 396
Y I P + S ++ +VL +++GR+L V P + +++ N+
Sbjct: 358 AYEYCIANAPAAGSTSLLIGDDVLPEYVYEGRVLSVTPTVQRDVANRMAEKNA------- 410
Query: 397 LKQRREEERK--ASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE 446
E+RK +A G N + V E +SK+D+ RE
Sbjct: 411 ------EKRKELLGKAPGERDRRNLYLLNEGRVAEGTKLAQLLSKTDMEIRE 456
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT-KRSKGIAYVLYAIPESASRAIEV 359
LFVR++P T+DE + FS F + H V+ KDT K+S+G +V +A E + A+
Sbjct: 24 LFVRSIPLQTTDDEFTDFFSNFAPLK--HAVIVKDTNKKSRGFGFVSFASEEDSQEALTK 81
Query: 360 LDNSIFQGRLLHV-MPARHKKSSDKQELHNSTSQGT-KTLKQRREEERKASEASGNTKAW 417
S Q LL V R +S + E T + KT K+ E + +
Sbjct: 82 ARTSKIQNHLLRVDFAKRRDRSKTRTEGSEQTKEIVKKTFKKSATERDDGKDEDKDFDEE 141
Query: 418 NSLFMRPDTVVENI 431
+SL +P ++ N+
Sbjct: 142 SSLKGKPKLIIRNM 155
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ V+++P T+D DFFS + A +++ + KSR F F+ F +E++++EA+
Sbjct: 24 LFVRSIPLQTTDDEFTDFFSNFAPLKHAVIVKDTNKKSRGFGFVSFASEEDSQEALTKAR 83
Query: 63 KSYLDTCRISCEIARK 78
S + + + A++
Sbjct: 84 TSKIQNHLLRVDFAKR 99
>gi|154275140|ref|XP_001538421.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
gi|150414861|gb|EDN10223.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
Length = 732
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 181/493 (36%), Gaps = 140/493 (28%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
P+S+ Q S L+V L + TE L E FS G V+ + + D T+RS G A
Sbjct: 42 PNSAGPSTTQP--HSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYA 99
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREE 403
YV Y RA+E L+ ++ +G+ +M QR
Sbjct: 100 YVNYNNTADGERALEDLNYTLIKGKPCRIM-----------------------WSQRDPA 136
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIA---LGETQ 460
RK + N DT ++N A D N L+ ++A G ++
Sbjct: 137 LRKTGQG-------NVFIKNLDTAIDNKALH------DTFAAFGNILSCKVAQDEFGNSK 183
Query: 461 ----VIAETKKALTNAGVNVSSL----EEFSAG----------KTDGLKRSNHVFLVKNL 502
V ET +A TNA +V+ + ++ G K + +K + VKNL
Sbjct: 184 GYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNL 243
Query: 503 PYDSSEGELAKMFGKFGSLDKVILP------STKTLALVVFLEPVEAAAAFKGLAYKRYK 556
+ S E ++F K+G + + ++ FL+ AAAA + L K YK
Sbjct: 244 DTEVSNEEFRELFEKYGEITSASISRDGETGKSRGFGFFYFLKHESAAAAVEELNDKEYK 303
Query: 557 GVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESR 616
G LY+ A K +++ + + +H+A R + +GV
Sbjct: 304 GQKLYVGRA----------QKKHEREEELRKQHEAARVEKASKYQGV------------- 340
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV--------------KKHLKNGKNV-- 660
+L+VKNL DE LR F I G I S +V +K N +NV
Sbjct: 341 NLYVKNLTDDIDDEKLRDLF---ISFGNITSARVMRDTAGDPGSESEKEKESANKENVKD 397
Query: 661 ---------------------------------SMGFGFIEFDSVETATNVCRDLQGTIL 687
S GFGF+ F + + A+ ++ ++
Sbjct: 398 EAKKESGEEDSADKSDKVEKSDSKNATEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMV 457
Query: 688 DGHALILQLCHAK 700
+G L + L K
Sbjct: 458 NGKPLYVALAQRK 470
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK-HLKNGKNVSMGFGFIEFDSVETA 675
++F+KNL+ ++ L F G ILS KV + N K G+GF+ +++ E A
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAF---GNILSCKVAQDEFGNSK----GYGFVHYETAEAA 196
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
TN + + G +L+ + + AKKD Q K E + T + V+N+
Sbjct: 197 TNAIKHVNGMLLNEKKVFVGHHIAKKDRQ-SKFEEMKANFTNVYVKNL 243
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
+ + VKNL V+ + R+ F + GEIT A + R + GKSR F F F + A A++
Sbjct: 236 TNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRGFGFFYFLKHESAAAAVE 295
Query: 60 YFN 62
N
Sbjct: 296 ELN 298
>gi|406988412|gb|EKE08420.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 123
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 53/82 (64%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L+V NL + A+ED++RE F +G V EV I++D+ + RS+G A+V A + A +A +
Sbjct: 7 KLYVGNLNFDASEDQVRELFGSYGEVQEVKIIMDRFSGRSRGFAFVRMATADEAGKAKDA 66
Query: 360 LDNSIFQGRLLHVMPARHKKSS 381
L FQG+ L + AR +++S
Sbjct: 67 LSGQPFQGKSLVIDWARSEQTS 88
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 490 LKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLD--KVIL----PSTKTLALVVFLEPVEA 543
+ + N V NL +D+SE ++ ++FG +G + K+I+ ++ A V EA
Sbjct: 1 MNQQNQKLYVGNLNFDASEDQVRELFGSYGEVQEVKIIMDRFSGRSRGFAFVRMATADEA 60
Query: 544 AAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGN 579
A L+ + ++G L ++WA S+ S+ ++S G+
Sbjct: 61 GKAKDALSGQPFQGKSLVIDWARSEQTSRPASSAGD 96
>gi|297736228|emb|CBI24866.3| unnamed protein product [Vitis vinifera]
Length = 694
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
+ P P S S E +S +FV N+ + AT+D L HF+KFG V +V IV D T +
Sbjct: 504 MQPSAPGSYSTGRPLEDADSRTIFVNNVHFAATKDSLSRHFNKFGEVVKVIIVTDAATGQ 563
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQE 385
KG AYV + E+A A+ LD + F R+L V+ K+SS QE
Sbjct: 564 PKGSAYVEFMRKEAAEHALS-LDGTSFMSRILKVV----KRSSTHQE 605
>gi|358370907|dbj|GAA87517.1| RNP domain protein [Aspergillus kawachii IFO 4308]
Length = 190
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T + KG AYV +A P
Sbjct: 61 KEEIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSL 120
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V+P R
Sbjct: 121 VAQAL-VLNESVFRGRNLKVVPKR 143
>gi|359487356|ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855398 [Vitis vinifera]
Length = 700
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
+ P P S S E +S +FV N+ + AT+D L HF+KFG V +V IV D T +
Sbjct: 510 MQPSAPGSYSTGRPLEDADSRTIFVNNVHFAATKDSLSRHFNKFGEVVKVIIVTDAATGQ 569
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQE 385
KG AYV + E+A A+ LD + F R+L V+ K+SS QE
Sbjct: 570 PKGSAYVEFMRKEAAEHALS-LDGTSFMSRILKVV----KRSSTHQE 611
>gi|258564224|ref|XP_002582857.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908364|gb|EEP82765.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 146
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+LF+ L + T++ LRE FSK+G + E +V D+DT RS+G +V +A A A+
Sbjct: 3 KLFIGGLAWHTTDETLREGFSKYGTIEEAIVVKDRDTNRSRGFGFVRFASEAEADAAMNA 62
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQE 385
+ N F GR++ V A ++ + E
Sbjct: 63 MSNQEFDGRMIRVDKAADRQPGQRSE 88
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S++ + L + T++ LR+ FS+ G I +A +++ +D +SR F F+ F +E EA+ A+
Sbjct: 2 SKLFIGGLAWHTTDETLREGFSKYGTIEEAIVVKDRDTNRSRGFGFVRFASEAEADAAMN 61
Query: 60 YFNKSYLDTCRISCEIA 76
+ D I + A
Sbjct: 62 AMSNQEFDGRMIRVDKA 78
>gi|164662126|ref|XP_001732185.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
gi|159106087|gb|EDP44971.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
Length = 215
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 282 GNPSSSSKDVQQEVLE-SGR-LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS 339
G S++S ++E +E GR ++V N+ Y AT +E+++HF G ++ V I+ DK T
Sbjct: 74 GTASAASHPSEEEKMEVDGRSIYVGNVDYGATPEEIQQHFQSCGTINRVTILCDKFTGHP 133
Query: 340 KGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
KG AYV +A A VL+ S+F+GRLL V P R
Sbjct: 134 KGFAYVEFADSSFVENAA-VLNESLFRGRLLKVTPKR 169
>gi|67528248|ref|XP_661934.1| hypothetical protein AN4330.2 [Aspergillus nidulans FGSC A4]
gi|40741301|gb|EAA60491.1| hypothetical protein AN4330.2 [Aspergillus nidulans FGSC A4]
gi|259482863|tpe|CBF77747.1| TPA: ribosome biogenesis (Nop4), putative (AFU_orthologue;
AFUA_4G06250) [Aspergillus nidulans FGSC A4]
Length = 724
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
Query: 273 DANGEIVDPGNPSSSSKDVQQEVLESGR--LFVRNLPYTATEDELREHFSKFGNVSEVHI 330
+A+G I + SSS +VQ++ R LF+R+LP +AT + L EHFS+ + +
Sbjct: 12 EASGAITES---SSSKNNVQEDGATQPRRELFIRSLPASATNESLAEHFSQSYVIKHAVV 68
Query: 331 VVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA--RHK 378
VVD TK+SKG +V +A E A A+E L+ S F+G+ + V A RH+
Sbjct: 69 VVDPKTKQSKGYGFVTFADVEDAKAALEELNGSTFEGKKIKVEYAQPRHR 118
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
+F+RNLP+T ++ L +HF++FG + IVVD +T+R +G +V + PE A ++
Sbjct: 311 IFIRNLPFTCDDESLYDHFTQFGPLRYARIVVDPETERPRGTGFVCFWKPEHAQACVQ 368
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 300 RLFVRNLPYT-ATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
+L VRNLP++ T ++L HF FG V ++ + K + G +V+ ++A +A+E
Sbjct: 151 KLIVRNLPWSIKTPEDLAAHFRSFGKVK--YVTLPKKGSQLAGFGFVVLRGKKNAEKALE 208
Query: 359 VLDNSIFQGRLLHV 372
++ GR L V
Sbjct: 209 AVNGKEVDGRTLAV 222
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 25/129 (19%)
Query: 616 RSLFVKNLNFKTCDENLRKHFGE-HIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
R LF+++L +E+L +HF + ++ + ++ V K S G+GF+ F VE
Sbjct: 37 RELFIRSLPASATNESLAEHFSQSYVIKHAVVVVDPK------TKQSKGYGFVTFADVED 90
Query: 675 ATNVCRDLQGTILDGHALILQLC---HAKKDEQV------------VKKAEKDKSST--- 716
A +L G+ +G + ++ H DE V K+ E+ K+ T
Sbjct: 91 AKAALEELNGSTFEGKKIKVEYAQPRHRVVDETVGKSVPSAEALERKKQREQQKADTQPP 150
Query: 717 KLLVRNVAF 725
KL+VRN+ +
Sbjct: 151 KLIVRNLPW 159
>gi|356576299|ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791652 [Glycine max]
Length = 386
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 56/90 (62%)
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
N S+SS+ Q+ L++ +LFV L + +E LR F FG + EV +++DK +KRSKG
Sbjct: 281 NVSNSSEASQEAPLKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIMDKISKRSKGY 340
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
A+V Y E+AS A++ ++ I G ++ V
Sbjct: 341 AFVEYTTEEAASAALKEMNGKIINGWMIVV 370
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIKY 60
++ V L Y +E LR F GE+ + K++ K K S+ +AF+ + TE+ A A+K
Sbjct: 298 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIMDKISKRSKGYAFVEYTTEEAASAALKE 357
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPR 86
N ++ I ++A+ PN PR
Sbjct: 358 MNGKIINGWMIVVDVAK----PNPPR 379
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 49/85 (57%), Gaps = 11/85 (12%)
Query: 613 VESRSLFVKNLNFKTCDENLR---KHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEF 669
++++ LFV L+F T ++ LR + FGE + E +++ K+ K S G+ F+E+
Sbjct: 294 LKTKKLFVTGLSFYTSEKTLRAAFEGFGELV-EVKVIMDKISKR-------SKGYAFVEY 345
Query: 670 DSVETATNVCRDLQGTILDGHALIL 694
+ E A+ +++ G I++G +++
Sbjct: 346 TTEEAASAALKEMNGKIINGWMIVV 370
>gi|261862339|ref|NP_001159882.1| putative RNA-binding protein 3 isoform 2 [Mus musculus]
gi|261862342|ref|NP_001159883.1| putative RNA-binding protein 3 isoform 2 [Mus musculus]
gi|6093936|sp|O89086.1|RBM3_MOUSE RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3
gi|3395381|dbj|BAA32060.1| rbm3 [Mus musculus]
gi|12834559|dbj|BAB22957.1| unnamed protein product [Mus musculus]
gi|12840849|dbj|BAB24981.1| unnamed protein product [Mus musculus]
gi|13879226|gb|AAH06580.1| Rbm3 protein [Mus musculus]
gi|15983757|gb|AAL10707.1| RNA-binding motif protein 3 [Mus musculus]
gi|74180334|dbj|BAE32335.1| unnamed protein product [Mus musculus]
gi|74198712|dbj|BAE39828.1| unnamed protein product [Mus musculus]
gi|74228699|dbj|BAE21846.1| unnamed protein product [Mus musculus]
gi|76780243|gb|AAI06177.1| Rbm3 protein [Mus musculus]
gi|148702004|gb|EDL33951.1| mCG116386, isoform CRA_a [Mus musculus]
gi|148702009|gb|EDL33956.1| mCG116386, isoform CRA_a [Mus musculus]
Length = 153
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESLDGRQIRV 79
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
LFV LNF T ++ L HF ++ VK ++ + S GFGFI F + E A++
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQR-----SRGFGFITFTNPEHASD 62
Query: 678 VCRDLQGTILDGHALILQLCHAKK 701
R + G LDG +++ HA K
Sbjct: 63 AMRAMNGESLDGRQ--IRVDHAGK 84
>gi|254570621|ref|XP_002492420.1| Nucleolar protein [Komagataella pastoris GS115]
gi|238032218|emb|CAY70207.1| Nucleolar protein [Komagataella pastoris GS115]
gi|328353565|emb|CCA39963.1| Nucleolar protein 4 [Komagataella pastoris CBS 7435]
Length = 653
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 28/161 (17%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYV-----------LYAI 349
+F+RNLPY A+E+ L+EHF KFG + VVD +T ++KG +V L
Sbjct: 256 IFIRNLPYDASEETLQEHFEKFGPIRYALPVVDHNTGQAKGTGFVAFKNSQDYEDCLLNA 315
Query: 350 PESASRAI----EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEER 405
P+ S ++ EV ++QGR+L + PA + S+ + L +R E++R
Sbjct: 316 PKPTSNSVLLPDEVSPLYVYQGRVLSIAPAVDRDSAGR-------------LMERNEKKR 362
Query: 406 KASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE 446
+ + G N + + EN ++ +DL RE
Sbjct: 363 QEALGKGEKDKRNIYLLHEGRISENSVLASLLTPADLKARE 403
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFVR +P A++++L + FS+F V IV DK + SKG +V + + + A+
Sbjct: 15 LFVRGIPTNASKEQLSDFFSQFAPVKHAIIVTDK-AEDSKGFGFVSFTSEDDSVLALAGA 73
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQ 384
F LL V A+ ++ +K+
Sbjct: 74 KAKKFNKVLLKVDIAKRRERKEKK 97
>gi|440636403|gb|ELR06322.1| hypothetical protein GMDG_07913 [Geomyces destructans 20631-21]
Length = 209
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E ++S +FV N+ Y A+ +E++ HF G+++ V I++DK T + KG AYV + P S
Sbjct: 61 KEDIDSRSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPAS 120
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V P R
Sbjct: 121 VAQAL-VLNESLFRGRNLKVDPKR 143
>gi|37497112|ref|NP_058089.2| putative RNA-binding protein 3 isoform 1 [Mus musculus]
gi|261862337|ref|NP_001159881.1| putative RNA-binding protein 3 isoform 1 [Mus musculus]
gi|26340316|dbj|BAC33821.1| unnamed protein product [Mus musculus]
gi|26352956|dbj|BAC40108.1| unnamed protein product [Mus musculus]
gi|37589528|gb|AAH59098.1| Rbm3 protein [Mus musculus]
Length = 154
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESLDGRQIRV 79
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
LFV LNF T ++ L HF ++ VK ++ + S GFGFI F + E A++
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQR-----SRGFGFITFTNPEHASD 62
Query: 678 VCRDLQGTILDGHALILQLCHAKK 701
R + G LDG +++ HA K
Sbjct: 63 AMRAMNGESLDGRQ--IRVDHAGK 84
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 158/402 (39%), Gaps = 49/402 (12%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L T TE L E F+ G V+ + + D T+RS G AYV Y RA+
Sbjct: 55 SASLYVGELDSTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 114
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
E L+ S+ + R +M S + T QG +K +E+ +A +T A
Sbjct: 115 EQLNYSLIKNRACRIM------WSQRDPALRKTGQGNIFIKNL--DEQIDHKALHDTFAA 166
Query: 418 NSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVS 477
+ + R G EA D A++ G ++ KK G +S
Sbjct: 167 FGNVLSCKVATDENGRSRGFGFVHYDTAEAADTAIKAVNG---MLLNDKKVFV--GHYIS 221
Query: 478 SLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTL 532
E D K VKNL + ++ E MF KFG + ++ +K
Sbjct: 222 KKER--QAHIDEQKSQFTNLYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDEEGKSKGF 279
Query: 533 ALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAK 592
V F + A AA L G L++ A Q + E + +
Sbjct: 280 GFVNFKDHESAQAAVDALHDTELNGKKLFVTRA------QKKAER----------EEELR 323
Query: 593 RALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK 652
++ + ++E ++ + + +L++KNL D+ LR F G I S K+
Sbjct: 324 KSYEQAKMEKLS-------KYQGANLYIKNLEDDMDDDKLRAEFEPF---GTITSCKI-- 371
Query: 653 HLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALIL 694
+++ K S GFGF+ + S E AT ++ +L L +
Sbjct: 372 -MRDEKGTSKGFGFVCYSSPEEATKAVAEMNNKMLGSKPLYV 412
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ L+++NL +D+LR F FG ++ I+ D + SKG +V Y+ PE A++A
Sbjct: 338 QGANLYIKNLEDDMDDDKLRAEFEPFGTITSCKIMRD-EKGTSKGFGFVCYSSPEEATKA 396
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQ 384
+ ++N + + L+V PA+ ++ +Q
Sbjct: 397 VAEMNNKMLGSKPLYVSPAQRREVRRQQ 424
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL VT+D D F++ GE+T A + + ++GKS+ F F+ F+ + A+ A+
Sbjct: 237 TNLYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDEEGKSKGFGFVNFKDHESAQAAVDA 296
Query: 61 FNKSYLDTCRISCEIARK 78
+ + L+ ++ A+K
Sbjct: 297 LHDTELNGKKLFVTRAQK 314
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KNL + +D+LR F G IT K+MR + G S+ F F+ + + +EA +A+
Sbjct: 340 ANLYIKNLEDDMDDDKLRAEFEPFGTITSCKIMRDEKGTSKGFGFVCYSSPEEATKAVAE 399
Query: 61 FNKSYLDTCRISCEIARK 78
N L + + A++
Sbjct: 400 MNNKMLGSKPLYVSPAQR 417
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
++F+KNL+ + + L F G +LS KV +NG+ S GFGF+ +D+ E A
Sbjct: 145 NIFIKNLDEQIDHKALHDTFAAF---GNVLSCKVATD-ENGR--SRGFGFVHYDTAEAAD 198
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
+ + G +L+ + + +KK+ Q +K + T L V+N+
Sbjct: 199 TAIKAVNGMLLNDKKVFVGHYISKKERQAHIDEQKSQ-FTNLYVKNL 244
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 118/285 (41%), Gaps = 31/285 (10%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G +F++NL L + F+ FGNV + D++ RS+G +V Y E+A AI+
Sbjct: 144 GNIFIKNLDEQIDHKALHDTFAAFGNVLSCKVATDEN-GRSRGFGFVHYDTAEAADTAIK 202
Query: 359 VLDNSIFQGRLLHVMPARHKKSSDKQELH--NSTSQGTKTLKQRREEERKASEASGNTKA 416
++ + + + V H S +++ H SQ T + + E E
Sbjct: 203 AVNGMLLNDKKVFV---GHYISKKERQAHIDEQKSQFTNLYVKNLDTEVTDDE------- 252
Query: 417 WNSLFMRPDTVVENIARK--HGVSKS----DLLDREANDLAVRIALGETQVIAETKKALT 470
+N +F + V + +K G SK + D E+ AV AL +T++ + K +T
Sbjct: 253 FNDMFAKFGEVTSAVVQKDEEGKSKGFGFVNFKDHESAQAAVD-ALHDTELNGK-KLFVT 310
Query: 471 NAGVNVSSLEE----FSAGKTDGLKRSNHVFL-VKNLPYDSSEGELAKMFGKFGSLDKVI 525
A EE + K + L + L +KNL D + +L F FG++
Sbjct: 311 RAQKKAEREEELRKSYEQAKMEKLSKYQGANLYIKNLEDDMDDDKLRAEFEPFGTITSCK 370
Query: 526 L-----PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWA 565
+ ++K V + P EA A + K PLY+ A
Sbjct: 371 IMRDEKGTSKGFGFVCYSSPEEATKAVAEMNNKMLGSKPLYVSPA 415
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + + L D F+ G + K+ ++G+SR F F+ + T + A+ AIK N
Sbjct: 146 IFIKNLDEQIDHKALHDTFAAFGNVLSCKVATDENGRSRGFGFVHYDTAEAADTAIKAVN 205
Query: 63 KSYLD 67
L+
Sbjct: 206 GMLLN 210
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 606 ADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFG 665
A ID + + +L+VKNL+ + D+ F K G + S V+K + GK S GFG
Sbjct: 227 AHIDEQKSQFTNLYVKNLDTEVTDDEFNDMFA---KFGEVTSAVVQKD-EEGK--SKGFG 280
Query: 666 FIEFDSVETATNVCRDLQGTILDGHALILQLCH--AKKDEQVVKKAEKDK 713
F+ F E+A L T L+G L + A+++E++ K E+ K
Sbjct: 281 FVNFKDHESAQAAVDALHDTELNGKKLFVTRAQKKAEREEELRKSYEQAK 330
>gi|353227476|emb|CCA77984.1| related to mRNA polyadenylate-binding protein PAB1 [Piriformospora
indica DSM 11827]
Length = 693
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 171/445 (38%), Gaps = 98/445 (22%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
P PSS+S L+V L + TE L E F+ G V+ + + D T+RS
Sbjct: 104 PPQPSSAS------------LYVGELDPSVTEAILFEIFNMIGPVASIRVCRDAVTRRSL 151
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM--------PARHKKSS----------- 381
G AYV Y RA+E L+ S+ +G+ HV PA K
Sbjct: 152 GYAYVNYLNSSDGERALEQLNYSLIKGKPWHVSRIMWSQRDPALRKTGQGNIFIKNLDEG 211
Query: 382 -DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKS 440
D + LH++ L + A + GN+K + F+ +T A V
Sbjct: 212 IDNKALHDTFVAFGNVLSC-----KVAVDEQGNSKGYG--FVHYETAEAADAAIKAVDGM 264
Query: 441 DLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVK 500
L D++ + I E Q S L+E A T+ VK
Sbjct: 265 LLNDKKVY-VGRHIPRKERQ----------------SKLDEIRAQFTN--------IYVK 299
Query: 501 NLPYDSSEGELAKMFGKFGSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYKRY 555
NL + E E K+F +G++ +L +K V + A A L K
Sbjct: 300 NLDTEIDEDEFRKLFEPYGTITSAVLNLDADGKSKGFGFVNYETHEMAQKAVDALNEKDI 359
Query: 556 KGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVES 615
G L++ A K N++++ + DA + +L+GV
Sbjct: 360 NGKKLFVGRA----------QKRNERDEELRRTFDAAKMERLAKLQGV------------ 397
Query: 616 RSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETA 675
+L++KN++ DE LR F + G I S K+ +++ K VS GFGF+ F + + A
Sbjct: 398 -NLYIKNIDDDMDDEKLRAEFEPY---GTITSSKI---MRDDKGVSKGFGFVCFSTPDEA 450
Query: 676 TNVCRDLQGTILDGHALILQLCHAK 700
T ++ ++ L + L +
Sbjct: 451 TRAIAEMNNKMIGSKPLYVSLAQRR 475
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I VKNL + ED R F G IT A L DGKS+ F F+ + T + A++A+
Sbjct: 294 TNIYVKNLDTEIDEDEFRKLFEPYGTITSAVLNLDADGKSKGFGFVNYETHEMAQKAVDA 353
Query: 61 FNK 63
N+
Sbjct: 354 LNE 356
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KN+ + +++LR F G IT +K+MR G S+ F F+ F T EA AI N
Sbjct: 399 LYIKNIDDDMDDEKLRAEFEPYGTITSSKIMRDDKGVSKGFGFVCFSTPDEATRAIAEMN 458
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 459 NKMIGSKPLYVSLAQR 474
>gi|242083506|ref|XP_002442178.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
gi|241942871|gb|EES16016.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
Length = 250
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 285 SSSSKDVQQEV-LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
+SS+ V Q + S +LFV L Y + LR+ F+K+G V E I++D+++ RS+G
Sbjct: 15 TSSNPSVYQAIRCMSSKLFVGGLSYGTDDHSLRDEFAKYGEVIEARIILDRESGRSRGFG 74
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHK 378
+V Y E AS AI +D GR + V A +
Sbjct: 75 FVTYTSSEEASAAITAMDGKTLDGRSIRVNHANER 109
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDS 671
R S LFV L++ T D +LR F K G ++ ++ ++G+ S GFGF+ + S
Sbjct: 26 RCMSSKLFVGGLSYGTDDHSLRDEF---AKYGEVIEARIILDRESGR--SRGFGFVTYTS 80
Query: 672 VETATNVCRDLQGTILDGHALILQLCHA 699
E A+ + G LDG + +++ HA
Sbjct: 81 SEEASAAITAMDGKTLDGRS--IRVNHA 106
>gi|210135027|ref|YP_002301466.1| RNA-binding protein [Helicobacter pylori P12]
gi|386746017|ref|YP_006219234.1| RNA-binding protein [Helicobacter pylori HUP-B14]
gi|210132995|gb|ACJ07986.1| RNA-binding protein [Helicobacter pylori P12]
gi|384552266|gb|AFI07214.1| RNA-binding protein [Helicobacter pylori HUP-B14]
Length = 82
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+AT ++++E FS+FG V V ++ D++TK+ KG +V ES S AI L
Sbjct: 4 IYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQ-EESVSEAIAKL 62
Query: 361 DNSIFQGRLLHVMPARHKKS 380
DN+ F GR + V A KKS
Sbjct: 63 DNTDFMGRTIRVTEANPKKS 82
>gi|344228406|gb|EGV60292.1| hypothetical protein CANTEDRAFT_136776 [Candida tenuis ATCC 10573]
Length = 647
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 171/428 (39%), Gaps = 89/428 (20%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L + E L E FS G VS + + D TK+S G AYV + + +AI
Sbjct: 50 SASLYVGELNTSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFVKFDDGEQAI 109
Query: 358 EVLDNSIFQGRLLHVMPARHKKS-----------------SDKQELHNSTSQGTKTLKQR 400
E L+ S+ +GR +M ++ S D + LH++ S + L
Sbjct: 110 EDLNYSLIEGRPCRIMWSQRDPSLRRNGEGNIFIKNLHPAIDNKALHDTFSAFGRILSC- 168
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
+ A++ GN+K + F+ +T A V+ L DRE + +G+
Sbjct: 169 ----KVATDELGNSKCFG--FVHYETAEAAEAAIENVNGMLLNDRE-------VFVGK-H 214
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
V + ++ S EE A T+ VF VKNL + ++ EL ++F +G
Sbjct: 215 VSKKDRE---------SKFEEMKANFTN-------VF-VKNLAPEYTDQELKELFSAYGP 257
Query: 521 -----LDKVILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
L+K + +K V F +A A L K G P+Y
Sbjct: 258 ITSSYLEKDLEGKSKGFGFVNFDNHNDAVKAVDELNNKEIAGQPIY-------------- 303
Query: 576 SKGNQKNDAVVGEHDAKRALLEQ---QLEGVTDADIDPDRVESRSLFVKNLNFKTCDENL 632
VG KR +E+ Q E + + + +LF+KNL+ E L
Sbjct: 304 ----------VGRAQKKRERMEELRRQYEATKLEKL--SKYQGVNLFIKNLDDTIDSEKL 351
Query: 633 RKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHAL 692
F G I S +V + + + S GFGF+ F S E AT ++ +++G L
Sbjct: 352 ENEFKPF---GNITSARV---MVDEQGKSKGFGFVCFSSPEEATKAITEMNQRMVEGKPL 405
Query: 693 ILQLCHAK 700
+ L K
Sbjct: 406 YVALAQRK 413
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + ++L + F G IT A++M + GKS+ F F+ F + +EA +AI N
Sbjct: 337 LFIKNLDDTIDSEKLENEFKPFGNITSARVMVDEQGKSKGFGFVCFSSPEEATKAITEMN 396
Query: 63 KSYLDTCRISCEIARK 78
+ ++ + +A++
Sbjct: 397 QRMVEGKPLYVALAQR 412
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL T+ L++ FS G IT + L + +GKS+ F F+ F +A +A+
Sbjct: 232 TNVFVKNLAPEYTDQELKELFSAYGPITSSYLEKDLEGKSKGFGFVNFDNHNDAVKAVDE 291
Query: 61 FN 62
N
Sbjct: 292 LN 293
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+LF+ + Y+ E LRE FSK+G V + I++D++T RS+G ++ Y E AS AI+
Sbjct: 43 KLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQA 102
Query: 360 LDNSIFQGRLLHVMPARHK 378
LD GR + V A +
Sbjct: 103 LDGQDLHGRPIRVNYANER 121
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
+++ + + E LR+ FS+ GE+ DA+++ ++ G+SR F FI + + +EA AI+
Sbjct: 42 TKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQ 101
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S LF+ +++ T +++LR+ F K G ++ ++ + G+ S GFGFI + SVE
Sbjct: 41 STKLFIGGVSYSTDEQSLREAF---SKYGEVVDARIIMDRETGR--SRGFGFITYTSVEE 95
Query: 675 ATNVCRDLQGTILDGHALILQLCHAK 700
A++ + L G L G + + + +
Sbjct: 96 ASSAIQALDGQDLHGRPIRVNYANER 121
>gi|413921449|gb|AFW61381.1| hypothetical protein ZEAMMB73_029405 [Zea mays]
Length = 465
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 104/256 (40%), Gaps = 31/256 (12%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+F+ LP TE++LRE G + EV + DKDTK +KG A+V + E+A RAIE +
Sbjct: 107 VFIGGLPRDITEEDLRELCEPLGEIYEVRLTKDKDTKENKGFAFVTFMDKEAAQRAIEDV 166
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ F+GR L R S K L K L + E + K
Sbjct: 167 QDREFKGRTL-----RCSLSQAKHRLF--VGNVPKGLSE--------EELTNTIKGKGPG 211
Query: 421 FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLE 480
+ + + R G + + D A Q ++ + + + VS E
Sbjct: 212 VINIEMFKHDPNRNRGFLFVEYYNHACADYA-------RQKLSSPNFKVDGSQLTVSWAE 264
Query: 481 EFSAGKTDGLKRSNHV--FLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-----LA 533
G TD + V VKNLP + S+ ++ +F K G + K++LP K
Sbjct: 265 --PKGSTDASSAAAQVKTIYVKNLPENVSKEKIKDLFDKHGEVTKIVLPPAKAGHKRDFG 322
Query: 534 LVVFLEPVEAAAAFKG 549
V F E A A KG
Sbjct: 323 FVHFAERSSALKAVKG 338
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I VKNLP+ V++++++D F + GE+T L K G R F F+ F A +A+K
Sbjct: 281 IYVKNLPENVSKEKIKDLFDKHGEVTKIVLPPAKAGHKRDFGFVHFAERSSALKAVKGSE 340
Query: 63 KSYLDTCRISCEIARKVGD 81
K +D + +A+ + D
Sbjct: 341 KYEIDGQVLEVSMAKPLAD 359
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIK 59
S + + LP+ +TE+ LR+ GEI + +L + KD K ++ FAF+ F ++ A+ AI+
Sbjct: 105 SEVFIGGLPRDITEEDLRELCEPLGEIYEVRLTKDKDTKENKGFAFVTFMDKEAAQRAIE 164
Query: 60 YFNKSYLDTCRISCEIAR 77
+ C +++
Sbjct: 165 DVQDREFKGRTLRCSLSQ 182
>gi|261199248|ref|XP_002626025.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239594233|gb|EEQ76814.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 783
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 184/493 (37%), Gaps = 140/493 (28%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
P+S++ Q S L+V L + TE L E FS G V+ + + D T+RS G A
Sbjct: 42 PNSAAPSTTQP--HSASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYA 99
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREE 403
YV Y RA+E L+ ++ +G+ +M QR
Sbjct: 100 YVNYNNTADGERALEDLNYTLIKGKPCRIM-----------------------WSQRDPA 136
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIA---LGETQ 460
RK T N DT ++N A D N L+ ++A G ++
Sbjct: 137 LRK-------TGQGNVFIKNLDTAIDNKALH------DTFAAFGNILSCKVAQDEFGNSK 183
Query: 461 ----VIAETKKALTNAGVNVSSL----EEFSAG----------KTDGLKRSNHVFLVKNL 502
V ET +A TNA +V+ + ++ G K + +K + VKNL
Sbjct: 184 GYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNL 243
Query: 503 PYDSSEGELAKMFGKFGSLDKVILP------STKTLALVVFLEPVEAAAAFKGLAYKRYK 556
+ E ++FGK+G + + ++ V F++ AAAA + L K +K
Sbjct: 244 DTKVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAAVEELNDKEFK 303
Query: 557 GVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESR 616
G LY+ A K +++ + + +H+A R + +GV
Sbjct: 304 GQKLYVGRA----------QKKHEREEELRKQHEAARVEKASKYQGV------------- 340
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV--------------KKHLKNGKNV-- 660
+L+VKNL DE LR F I G I S +V +K + N +NV
Sbjct: 341 NLYVKNLTDDIDDEKLRDLF---IGFGNITSARVMRDTIADAGSESEKEKEISNKENVKE 397
Query: 661 ---------------------------------SMGFGFIEFDSVETATNVCRDLQGTIL 687
S GFGF+ F + + A+ ++ ++
Sbjct: 398 EAKKESAEEESSDKSDKAEKSDSKKTLEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMV 457
Query: 688 DGHALILQLCHAK 700
+G L + L K
Sbjct: 458 NGKPLYVALAQRK 470
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK-HLKNGKNVSMGFGFIEFDSVETA 675
++F+KNL+ ++ L F G ILS KV + N K G+GF+ +++ E A
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAF---GNILSCKVAQDEFGNSK----GYGFVHYETAEAA 196
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
TN + + G +L+ + + AKKD Q K E + T + V+N+
Sbjct: 197 TNAIKHVNGMLLNEKKVFVGHHIAKKDRQ-SKFEEMKANFTNVYVKNL 243
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR-TKDGKSRQFAFIGFRTEQEAEEAIK 59
+ + VKNL VT + R+ F + G+IT A + ++ GKSR F F+ F + A A++
Sbjct: 236 TNVYVKNLDTKVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAAVE 295
Query: 60 YFN 62
N
Sbjct: 296 ELN 298
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+++VKNL+ K +E R+ FG++ G I S + + GK S GFGF+ F E+A
Sbjct: 237 NVYVKNLDTKVTNEEFRELFGKY---GDITSASITHDSETGK--SRGFGFVNFVKHESAA 291
Query: 677 NVCRDLQGTILDGHALILQLCHAK--KDEQVVKKAE 710
+L G L + K ++E++ K+ E
Sbjct: 292 AAVEELNDKEFKGQKLYVGRAQKKHEREEELRKQHE 327
>gi|350629412|gb|EHA17785.1| hypothetical protein ASPNIDRAFT_55885 [Aspergillus niger ATCC 1015]
Length = 192
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T + KG AYV +A P
Sbjct: 64 KEEIDARSVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSL 123
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V+P R
Sbjct: 124 VAQAL-VLNESVFRGRNLKVVPKR 146
>gi|145239151|ref|XP_001392222.1| polyadenylate-binding protein 2 [Aspergillus niger CBS 513.88]
gi|134076726|emb|CAK39785.1| unnamed protein product [Aspergillus niger]
Length = 189
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T + KG AYV +A P
Sbjct: 61 KEEIDARSVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSL 120
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V+P R
Sbjct: 121 VAQAL-VLNESVFRGRNLKVVPKR 143
>gi|261824468|pdb|2KI2|A Chain A, Solution Structure Of Ss-Dna Binding Protein 12rnp2
Precursor, Hp0827(O25501_helpy) Form Helicobacter Pylori
Length = 90
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+AT ++++E FS+FG V V ++ D++TK+ KG +V ES S AI L
Sbjct: 4 IYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQ-EESVSEAIAKL 62
Query: 361 DNSIFQGRLLHVMPARHKKS 380
DN+ F GR + V A KKS
Sbjct: 63 DNTDFMGRTIRVTEANPKKS 82
>gi|70995100|ref|XP_752316.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|66849951|gb|EAL90278.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|159131072|gb|EDP56185.1| RNP domain protein [Aspergillus fumigatus A1163]
Length = 215
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T + KG AYV +A P
Sbjct: 86 KEEIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSL 145
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V+P R
Sbjct: 146 VAQAL-VLNESVFRGRNLKVVPKR 168
>gi|395856895|ref|XP_003800852.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Otolemur
garnettii]
Length = 274
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 276 GEIVDPGNPSSSSKDVQQEVLESGR--LFVRNLPYTATEDELREHFSKFGNVSEVHIVVD 333
G+++ P P +E +E+ ++V N+ Y T +EL HF+ G + V I+ D
Sbjct: 118 GQMLRPKIPGCPFPGNPEEKMEADHRSIYVGNVDYGGTAEELEAHFNCCGEIHRVTILCD 177
Query: 334 KDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
K + KG AY+ +A SA A+E LD+S+F+GR++ V+P R
Sbjct: 178 KFSGHPKGYAYIEFATKSSAQAAVE-LDDSVFRGRVIKVLPKR 219
>gi|449547299|gb|EMD38267.1| hypothetical protein CERSUDRAFT_113433 [Ceriporiopsis subvermispora
B]
Length = 679
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 168/403 (41%), Gaps = 49/403 (12%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V L T TE L E F+ G V+ + + D T+RS G AYV Y RA+E L
Sbjct: 50 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQL 109
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ S+ +GR +M ++ + K T QG +K +E ++A +T A
Sbjct: 110 NYSLIKGRACRIMWSQRDPALRK------TGQGNIFIKNL--DEGIDNKALHDTFAAFGN 161
Query: 421 FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLE 480
+ + R G EA D A++ G ++ KK G ++S E
Sbjct: 162 VLSCKVATDEHGRSKGYGFVHYETAEAADTAIKAVNG---MLLNDKKVYV--GPHISRKE 216
Query: 481 EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALV 535
S K + +K VKN+ + ++ E ++F +FG++ ++ +K V
Sbjct: 217 RQS--KIEEMKAQFTNVYVKNIDAEVTDEEFRQLFEQFGNVTSAVIQRDEEGRSKGFGFV 274
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRAL 595
F + EA + L G L++ A Q + E + +++
Sbjct: 275 NFEKHEEAQKGVESLHDFELNGKKLFVTRA------QKKAER----------EEELRKSY 318
Query: 596 LEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLK 655
+ + E ++ + + +L++KNL + DE LR+ F G I S KV ++
Sbjct: 319 EQAKNEKLS-------KYQGVNLYIKNLEDEVDDERLRQEFEPF---GTITSAKV---MR 365
Query: 656 NGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
+ K S GFGF+ F S + AT ++ ++ L + L
Sbjct: 366 DEKGSSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQ 408
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL V ++RLR F G IT AK+MR + G S+ F F+ F + EA +A+ N
Sbjct: 334 LYIKNLEDEVDDERLRQEFEPFGTITSAKVMRDEKGSSKGFGFVCFSSPDEATKAVAEMN 393
Query: 63 KSYLDTCRISCEIARK 78
+ T + +A++
Sbjct: 394 NKMIGTKPLYVSLAQR 409
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
+ + VKN+ VT++ R F Q G +T A + R ++G+S+ F F+ F +EA++ ++
Sbjct: 229 TNVYVKNIDAEVTDEEFRQLFEQFGNVTSAVIQRDEEGRSKGFGFVNFEKHEEAQKGVE 287
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G +F++NL L + F+ FGNV + D + RSKG +V Y E+A AI+
Sbjct: 136 GNIFIKNLDEGIDNKALHDTFAAFGNVLSCKVATD-EHGRSKGYGFVHYETAEAADTAIK 194
Query: 359 VLDNSIFQGRLLHVMP--ARHKKSSDKQEL 386
++ + + ++V P +R ++ S +E+
Sbjct: 195 AVNGMLLNDKKVYVGPHISRKERQSKIEEM 224
>gi|340939483|gb|EGS20105.1| putative poly(A) binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 211
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E ++S +FV N+ Y+ + +EL+ HF G+++ V I++DK T + KG AYV +A P
Sbjct: 68 KEEVDSRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSL 127
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL++S+F+GR + V P R
Sbjct: 128 VAQAL-VLNDSVFKGRNIKVAPKR 150
>gi|47222076|emb|CAG12102.1| unnamed protein product [Tetraodon nigroviridis]
Length = 215
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++ T ++L + F+K+G V +V IV DKDT+RSKG+A+VL+ ESA + +
Sbjct: 12 VYVSNLPFSLTNNDLHKLFTKYGKVVKVTIVKDKDTRRSKGVAFVLFLDRESARNCVRAV 71
Query: 361 DNSIFQGRLL 370
+N GR +
Sbjct: 72 NNKQLFGRTV 81
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 285 SSSSKDVQQEV--LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
S S+ + Q + + S +LF+ L Y+ + LRE F K+G V E ++VD++T RS+G
Sbjct: 24 SVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGF 83
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
+V + E AS AI+ LD GR + V
Sbjct: 84 GFVTFTSSEEASSAIQALDGQDLHGRRVRV 113
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ S LF+ L++ T D +LR+ F H K G ++ +V + G+ S GFGF+ F S
Sbjct: 37 MSSSKLFIGGLSYSTDDTSLREAF--H-KYGEVIEARVIVDRETGR--SRGFGFVTFTSS 91
Query: 673 ETATNVCRDLQGTILDG 689
E A++ + L G L G
Sbjct: 92 EEASSAIQALDGQDLHG 108
>gi|15645446|ref|NP_207620.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori 26695]
gi|410024053|ref|YP_006893306.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori Rif1]
gi|410501820|ref|YP_006936347.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori Rif2]
gi|410682339|ref|YP_006934741.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori 26695]
gi|419417638|ref|ZP_13958055.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori P79]
gi|2313961|gb|AAD07877.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori 26695]
gi|384372572|gb|EIE28156.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori P79]
gi|409893980|gb|AFV42038.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori 26695]
gi|409895710|gb|AFV43632.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori Rif1]
gi|409897371|gb|AFV45225.1| ss-DNA binding protein 12RNP2 precursor [Helicobacter pylori Rif2]
Length = 82
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+AT ++++E FS+FG V V ++ D++TK+ KG +V ES S AI L
Sbjct: 4 IYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQ-EESVSEAIAKL 62
Query: 361 DNSIFQGRLLHVMPARHKKS 380
DN+ F GR + V A KKS
Sbjct: 63 DNTDFMGRTIRVTEANPKKS 82
>gi|429860717|gb|ELA35441.1| rnp domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 218
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
++S +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P ++
Sbjct: 88 VDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQ 147
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
A+ VL+ SIF+GR + V+P R
Sbjct: 148 AL-VLNESIFKGRNIKVVPKR 167
>gi|344250008|gb|EGW06112.1| Putative RNA-binding protein 3 [Cricetulus griseus]
Length = 169
Score = 66.2 bits (160), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESLDGRQIRV 79
Score = 43.9 bits (102), Expect = 0.35, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L HF G I V V K + + S GFGFI F + E
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSF---GPISEVVVVKDRETQR--SRGFGFITFTNPE 58
Query: 674 TATNVCRDLQGTILDGHALILQLCHAKK 701
A++ R + G LDG +++ HA K
Sbjct: 59 HASDAMRAMNGESLDGRQ--IRVDHAGK 84
>gi|367050962|ref|XP_003655860.1| hypothetical protein THITE_2120031 [Thielavia terrestris NRRL 8126]
gi|347003124|gb|AEO69524.1| hypothetical protein THITE_2120031 [Thielavia terrestris NRRL 8126]
Length = 795
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 281 PGNPSSSSKD------VQQEVLESGR-LFVRNLPYTATEDELREHFSKFGNVSEVHIVVD 333
P NP ++S+ ++ +ES R LFVR+LP +AT + L E FS+ V +V+D
Sbjct: 16 PANPEAASEQQASDPPSKKARVESRRQLFVRSLPPSATSESLAEFFSQHYPVKHATVVLD 75
Query: 334 KDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQG 393
TK S+G +V +A PE A A E L N +F GR L + A+ + + + SQ
Sbjct: 76 PKTKTSRGYGFVSFADPEDAVEAKEKLANELFDGRRLKLDIAQPRHRDAAKSGPEAVSQA 135
Query: 394 TKTLKQRREEERKAS 408
KQ+R EE A+
Sbjct: 136 A-AEKQKRAEELAAA 149
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
LF+RNLPYT T++ L+ HFS+FG V +V+D+ T + G +V +
Sbjct: 373 LFIRNLPYTTTDETLKAHFSRFGRVRYARVVMDRATDKPAGTGFVCF 419
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 61/152 (40%), Gaps = 30/152 (19%)
Query: 594 ALLEQQLEGVTDADIDPDRVESR-SLFVKNLNFKTCDENLRKHFGEH--IKEGRILSVKV 650
A EQQ +D RVESR LFV++L E+L + F +H +K ++
Sbjct: 21 AASEQQ---ASDPPSKKARVESRRQLFVRSLPPSATSESLAEFFSQHYPVKHATVV---- 73
Query: 651 KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH------AKKDEQ 704
L S G+GF+ F E A L + DG L L + AK +
Sbjct: 74 ---LDPKTKTSRGYGFVSFADPEDAVEAKEKLANELFDGRRLKLDIAQPRHRDAAKSGPE 130
Query: 705 VVKKAEKDKS-----------STKLLVRNVAF 725
V +A +K KL++RN+ +
Sbjct: 131 AVSQAAAEKQKRAEELAAARKPPKLIIRNLPW 162
>gi|374299435|ref|YP_005051074.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str. Walvis
Bay]
gi|332552371|gb|EGJ49415.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str. Walvis
Bay]
Length = 100
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L+V NLP++A+ED++R+ FS +G V+ V ++ D++T R +G +V E A AI+
Sbjct: 4 KLYVGNLPFSASEDDIRDLFSTYGEVNSVSLITDRETGRLRGFGFVEMD-DEGAREAIQS 62
Query: 360 LDNSIFQGRLLHVMPARHK 378
LD FQGR L V A+ K
Sbjct: 63 LDGKDFQGRNLKVNEAQEK 81
>gi|55778182|gb|AAH86491.1| Rbm3 protein [Mus musculus]
Length = 128
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESLDGRQIRV 79
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
LFV LNF T ++ L HF ++ VK ++ + S GFGFI F + E A++
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQR-----SRGFGFITFTNPEHASD 62
Query: 678 VCRDLQGTILDGHALILQLCHAKK 701
R + G LDG +++ HA K
Sbjct: 63 AMRAMNGESLDGRQ--IRVDHAGK 84
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 285 SSSSKDVQQEV--LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
S+S+ + Q + + S +LFV + Y+ + LRE F+++G V +V +++D++T RS+G
Sbjct: 24 SASTPSLFQAIRSMSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGF 83
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHK 378
+V +A E AS AI+ +D GR + V A +
Sbjct: 84 GFVTFATSEDASSAIQGMDGQDLHGRRIRVNYATER 119
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ S LFV +++ T D +LR+ F + G ++ VKV + G+ S GFGF+ F +
Sbjct: 37 MSSAKLFVGGISYSTDDMSLRESFARY---GEVIDVKVIMDRETGR--SRGFGFVTFATS 91
Query: 673 ETATNVCRDLQGTILDGHAL 692
E A++ + + G L G +
Sbjct: 92 EDASSAIQGMDGQDLHGRRI 111
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 11 YVTED-RLRDFFSQKGEITDAK-LMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDT 68
Y T+D LR+ F++ GE+ D K +M + G+SR F F+ F T ++A AI+ + L
Sbjct: 49 YSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQDLHG 108
Query: 69 CRISCEIARKVGDP 82
RI A + P
Sbjct: 109 RRIRVNYATERSRP 122
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 285 SSSSKDVQQEV--LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
S+S+ + Q + + S +LFV + Y+ + LRE F+++G V +V +++D++T RS+G
Sbjct: 24 SASTPSLFQAIRSMSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGF 83
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHK 378
+V +A E AS AI+ +D GR + V A +
Sbjct: 84 GFVTFATSEDASSAIQGMDGQDLHGRRIRVNYATER 119
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ S LFV +++ T D +LR+ F + G ++ VKV + G+ S GFGF+ F +
Sbjct: 37 MSSAKLFVGGISYSTDDMSLRESFARY---GEVIDVKVIMDRETGR--SRGFGFVTFATS 91
Query: 673 ETATNVCRDLQGTILDGHAL 692
E A++ + + G L G +
Sbjct: 92 EDASSAIQGMDGQDLHGRRI 111
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 11 YVTED-RLRDFFSQKGEITDAK-LMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDT 68
Y T+D LR+ F++ GE+ D K +M + G+SR F F+ F T ++A AI+ + L
Sbjct: 49 YSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQDLHG 108
Query: 69 CRISCEIARKVGDP 82
RI A + P
Sbjct: 109 RRIRVNYATERSRP 122
>gi|346969940|gb|EGY13392.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 205
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E ++S +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P
Sbjct: 75 KEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 134
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V+P R
Sbjct: 135 VAQAL-VLNESVFKGRNIKVVPKR 157
>gi|322711066|gb|EFZ02640.1| poly(A) RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 743
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 170/428 (39%), Gaps = 94/428 (21%)
Query: 247 NDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNL 306
N+ +GD+ D+ + + G EDA+ PSS++ Q S L+V L
Sbjct: 23 NNGSGDAKPTVDTTVGTA-----GSEDASAPT-----PSSAAPHPQ----NSASLYVGEL 68
Query: 307 PYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQ 366
+ TE L E FS+ G V+ + + D T+RS G AYV Y +A+E L+ ++ +
Sbjct: 69 DPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALEELNYTLIK 128
Query: 367 GRLLHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQRREEERKASE 409
GR +M PA K D + LH++ + L + A +
Sbjct: 129 GRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSC-----KVAQD 183
Query: 410 ASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKAL 469
+GN+K + + D A KH LL+ + + I + Q
Sbjct: 184 ENGNSKGYGFVHYETDEAAHQ-AIKH--VNGMLLNEKKVYVGHHIPKKDRQ--------- 231
Query: 470 TNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-- 527
S EE A T+ +KN+ ++S+ E ++F K+G + L
Sbjct: 232 -------SKFEEMKANFTN--------IYIKNISTEASDDEFRELFEKYGDITSSSLARD 276
Query: 528 ---STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDA 584
++ V F AA A + L K ++G LY+ A K +++ +
Sbjct: 277 QEGKSRGFGFVNFTTHESAAKAVEELHGKDFRGQDLYVGRA----------QKKHEREEE 326
Query: 585 VVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGR 644
+ ++A R + +GV +L++KNL+ DE LR+ F E G
Sbjct: 327 LRKSYEAARLEKANKYQGV-------------NLYIKNLDDDVDDEKLRQMFAEF---GP 370
Query: 645 ILSVKVKK 652
I S KV +
Sbjct: 371 ITSAKVMR 378
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
+ I +KN+ ++D R+ F + G+IT + L R ++GKSR F F+ F T + A +A++
Sbjct: 242 TNIYIKNISTEASDDEFRELFEKYGDITSSSLARDQEGKSRGFGFVNFTTHESAAKAVE 300
>gi|303248437|ref|ZP_07334696.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
gi|302490148|gb|EFL50067.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
Length = 96
Score = 66.2 bits (160), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L+V NLP++ EDE+R F+ +G+V V+++VD++T R +G +V + PE A A+
Sbjct: 2 SKKLYVGNLPFSTNEDEIRNLFAAYGDVESVNLIVDRETGRLRGFGFVEMS-PEGADAAM 60
Query: 358 EVLDNSIFQGRLLHVMPARHKK 379
E LD F GR L V A+ ++
Sbjct: 61 EALDGKAFGGRDLRVNEAQERQ 82
>gi|116191833|ref|XP_001221729.1| hypothetical protein CHGG_05634 [Chaetomium globosum CBS 148.51]
gi|88181547|gb|EAQ89015.1| hypothetical protein CHGG_05634 [Chaetomium globosum CBS 148.51]
Length = 792
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 15/126 (11%)
Query: 284 PSSSSKDVQQEVLESGR-LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
P+ SK + +ES R LFVR+LP AT + L E FS+ V +VVD TK S+G
Sbjct: 27 PNPPSKKAR---VESNRQLFVRSLPPNATSESLTEFFSQHYPVKHATVVVDPKTKFSRGY 83
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLH--VMPARHKKSSDKQELHNSTSQGTKTLKQR 400
+V +A P+ A+ A + L N +F GR L + +RH+ N T G++ L +
Sbjct: 84 GFVSFADPDDAAEAKDKLKNELFSGRRLKLDIAQSRHR---------NPTKSGSEALTKA 134
Query: 401 REEERK 406
E +RK
Sbjct: 135 AEVKRK 140
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
LF+RNLPY+ T++ L+ HF+ FG V +V+D+ T R G +V +
Sbjct: 355 LFIRNLPYSTTDETLKAHFATFGPVRYARVVMDRATDRPAGTGFVCF 401
>gi|121702091|ref|XP_001269310.1| RNP domain protein [Aspergillus clavatus NRRL 1]
gi|119397453|gb|EAW07884.1| RNP domain protein [Aspergillus clavatus NRRL 1]
Length = 188
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T + KG AYV +A P
Sbjct: 61 KEEIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSL 120
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V+P R
Sbjct: 121 VAQAL-VLNESVFRGRNLKVVPKR 143
>gi|302421908|ref|XP_003008784.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
gi|261351930|gb|EEY14358.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
Length = 205
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E ++S +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P
Sbjct: 75 KEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 134
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V+P R
Sbjct: 135 VAQAL-VLNESVFKGRNIKVVPKR 157
>gi|226293059|gb|EEH48479.1| nucleolar protein [Paracoccidioides brasiliensis Pb18]
Length = 691
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 19/133 (14%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFVR+LP +AT + L ++FS+ + +V+D TK+SKG +V +A E +RA+E
Sbjct: 50 LFVRSLPLSATTESLTDYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADSEDVARALEEF 109
Query: 361 DNSIFQGRLLHVMPA--RHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWN 418
+ S+F G+ L + A RH+K +K STS K +RE E K
Sbjct: 110 NGSVFDGKKLKIEVAEPRHRKVDEKGGKSVSTS------KPKRERENK-----------Q 152
Query: 419 SLFMRPDTVVENI 431
+L P ++ N+
Sbjct: 153 ALVQPPKLIIRNL 165
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 278 IVDPGNPSSSSKDVQQEVLE---SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDK 334
+ D G +K V EV + + +F+RNLP+TAT++ L EHF +FG + +V D
Sbjct: 249 VKDNGTEKEDNKKVHAEVEDDRNASTVFIRNLPFTATDESLYEHFVQFGPLRYARVVFDP 308
Query: 335 DTKRSKGIAYVLY 347
+T R +G A+V +
Sbjct: 309 ETDRPRGTAFVCF 321
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 588 EHDAKRALLEQQLEGVTDAD--IDPDRVESR-SLFVKNLNFKTCDENLRKHFGEH--IKE 642
+ D + +QQ E + D D + P + ++R +LFV++L E+L +F + +K
Sbjct: 17 QEDGRVPATDQQTEALPDVDAALSPIKAKNRRTLFVRSLPLSATTESLTDYFSQSYPLKH 76
Query: 643 GRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC---HA 699
++ L S G+GF+ F E + G++ DG L +++ H
Sbjct: 77 ATVV-------LDPQTKQSKGYGFVTFADSEDVARALEEFNGSVFDGKKLKIEVAEPRHR 129
Query: 700 KKDEQVVKKAEKDK------------SSTKLLVRNVAF 725
K DE+ K K KL++RN+ +
Sbjct: 130 KVDEKGGKSVSTSKPKRERENKQALVQPPKLIIRNLPW 167
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Query: 292 QQEVLESGRLFVRNLPYTATEDE-LREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIP 350
+Q +++ +L +RNLP++ E E L F FG V + V+ K + G +V+
Sbjct: 151 KQALVQPPKLIIRNLPWSIAEPEQLEVLFRSFGKVK--YAVIPKKGNKHSGFGFVVLRGR 208
Query: 351 ESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEA 410
++A +A+E ++ GR L V A K D EL N T G K +E+ +K
Sbjct: 209 KNAEKALEAVNGKEVDGRTLAVDWAAEKNVWD--ELQNHTD-GVKDNGTEKEDNKKVHAE 265
Query: 411 SGNTKAWNSLFMR--PDTVVENIARKHGV 437
+ + +++F+R P T + +H V
Sbjct: 266 VEDDRNASTVFIRNLPFTATDESLYEHFV 294
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 18/146 (12%)
Query: 497 FLVKNLPYDSSEGE-LAKMFGKFGSLDKVILPSTKT----LALVVFLEPVEAAAAFKGLA 551
+++NLP+ +E E L +F FG + ++P VV A A + +
Sbjct: 160 LIIRNLPWSIAEPEQLEVLFRSFGKVKYAVIPKKGNKHSGFGFVVLRGRKNAEKALEAVN 219
Query: 552 YKRYKGVPLYLEWAP-SDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDP 610
K G L ++WA +V + K++ E + K A+++
Sbjct: 220 GKEVDGRTLAVDWAAEKNVWDELQNHTDGVKDNGTEKEDNKK-----------VHAEVED 268
Query: 611 DRVESRSLFVKNLNFKTCDENLRKHF 636
DR S ++F++NL F DE+L +HF
Sbjct: 269 DRNAS-TVFIRNLPFTATDESLYEHF 293
Score = 39.3 bits (90), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAK-LMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+ V++LP T + L D+FSQ + A ++ + +S+ + F+ F ++ A++ F
Sbjct: 50 LFVRSLPLSATTESLTDYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADSEDVARALEEF 109
Query: 62 NKSYLDTCRISCEIA 76
N S D ++ E+A
Sbjct: 110 NGSVFDGKKLKIEVA 124
>gi|119496085|ref|XP_001264816.1| RNP domain protein [Neosartorya fischeri NRRL 181]
gi|119412978|gb|EAW22919.1| RNP domain protein [Neosartorya fischeri NRRL 181]
Length = 190
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T + KG AYV +A P
Sbjct: 61 KEEIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSL 120
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V+P R
Sbjct: 121 VAQAL-VLNESVFRGRNLKVVPKR 143
>gi|336260077|ref|XP_003344835.1| hypothetical protein SMAC_06118 [Sordaria macrospora k-hell]
gi|380089032|emb|CCC12976.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 213
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E ++S +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P
Sbjct: 76 KEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPNL 135
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V+P R
Sbjct: 136 VAQAL-VLNESVFKGRNIKVVPKR 158
>gi|118474079|ref|YP_892397.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|424821065|ref|ZP_18246103.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
gi|118413305|gb|ABK81725.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|342327844|gb|EGU24328.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
Length = 82
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 45/78 (57%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y TE ELRE FS FG V+ IV DK+T RSKG +V + E A +AIE
Sbjct: 4 IYVGNLSYRMTESELREVFSSFGEVTRAKIVKDKETNRSKGFGFVEMSSDEQAKKAIEGT 63
Query: 361 DNSIFQGRLLHVMPARHK 378
+ GR L V AR +
Sbjct: 64 NGKEVGGRALRVNEARPR 81
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKYF 61
I V NL +TE LR+ FS GE+T AK+++ K+ +S+ F F+ ++++A++AI+
Sbjct: 4 IYVGNLSYRMTESELREVFSSFGEVTRAKIVKDKETNRSKGFGFVEMSSDEQAKKAIEGT 63
Query: 62 N 62
N
Sbjct: 64 N 64
>gi|385249345|ref|YP_005777564.1| RNA binding protein [Helicobacter pylori F57]
gi|317182140|dbj|BAJ59924.1| RNA binding protein [Helicobacter pylori F57]
Length = 82
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+AT ++++E FS+FG V V ++ D++TK+ KG +V E S AI L
Sbjct: 4 IYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQ-EEGVSEAIAKL 62
Query: 361 DNSIFQGRLLHVMPARHKKS 380
DN+ F GR++ V A KKS
Sbjct: 63 DNTDFMGRVIRVTEANPKKS 82
>gi|420455069|ref|ZP_14953899.1| RNA binding protein [Helicobacter pylori Hp A-14]
gi|393073419|gb|EJB74193.1| RNA binding protein [Helicobacter pylori Hp A-14]
Length = 82
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+AT ++++E FS+FG V V ++ D++TK+ KG +V E S AI L
Sbjct: 4 IYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQ-EEGVSEAIAKL 62
Query: 361 DNSIFQGRLLHVMPARHKKS 380
DN+ F GR + V A KKS
Sbjct: 63 DNTDFMGRTIRVTEANSKKS 82
>gi|67521766|ref|XP_658944.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|40746367|gb|EAA65523.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|259488327|tpe|CBF87685.1| TPA: RNP domain protein (AFU_orthologue; AFUA_1G09490) [Aspergillus
nidulans FGSC A4]
Length = 187
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T + KG AYV +A P
Sbjct: 62 KEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSL 121
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V+P R
Sbjct: 122 VAQAL-VLNESVFRGRNLKVVPKR 144
>gi|403290994|ref|XP_003936587.1| PREDICTED: putative RNA-binding protein 3-like [Saimiri boliviensis
boliviensis]
Length = 159
Score = 65.9 bits (159), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVAGLNFNNDEQPLEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVA 63
Query: 357 IEVLDNSIFQGRLLHV 372
++ ++ G +HV
Sbjct: 64 MKAMNGESLDGGQIHV 79
>gi|193215305|ref|YP_001996504.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
gi|193088782|gb|ACF14057.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
Length = 104
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL YT TE+ELR+ FS++G V+ +I+VDK + +S+G +V A +AIE L
Sbjct: 3 IYVGNLSYTLTENELRDVFSEYGEVASANIIVDKYSGKSRGFGFVDMPNEADAEQAIEAL 62
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQE 385
+ S GR L V AR +S+D+ E
Sbjct: 63 NGSQLDGRSLKVNEAR-PRSNDRSE 86
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKYF 61
I V NL +TE+ LRD FS+ GE+ A ++ K GKSR F F+ E +AE+AI+
Sbjct: 3 IYVGNLSYTLTENELRDVFSEYGEVASANIIVDKYSGKSRGFGFVDMPNEADAEQAIEAL 62
Query: 62 NKSYLDTCRISCEIAR 77
N S LD + AR
Sbjct: 63 NGSQLDGRSLKVNEAR 78
>gi|225678061|gb|EEH16345.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 755
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 153/398 (38%), Gaps = 89/398 (22%)
Query: 282 GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
GN + +S S L+V L + TE L E FS G V+ + + D T+RS G
Sbjct: 37 GNETPNSAAPTNAQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLG 96
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRR 401
AYV Y RA+E L+ ++ +G+ +M QR
Sbjct: 97 YAYVNYNNTADGERALEDLNYTLIKGKPCRIM-----------------------WSQRD 133
Query: 402 EEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIAL----- 456
RK + N DT ++N A D N L+ ++A
Sbjct: 134 PALRKTGQG-------NVFIKNLDTAIDNKALH------DTFAAFGNILSCKVAQDEFGN 180
Query: 457 --GETQVIAETKKALTNAGVNVSSL----EEFSAG----------KTDGLKRSNHVFLVK 500
G V ET +A TNA +V+ + ++ G K + +K + VK
Sbjct: 181 SKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVK 240
Query: 501 NLPYDSSEGELAKMFGKFGSLDKVILP------STKTLALVVFLEPVEAAAAFKGLAYKR 554
NL + + E ++F K+G + L ++ V F+ AAAA + L K
Sbjct: 241 NLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVEDLNDKE 300
Query: 555 YKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVE 614
YKG LY+ A K +++ + + +H+A R + +GV
Sbjct: 301 YKGQKLYVGRA----------QKKHEREEELRKQHEAARVEKASKYQGV----------- 339
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK 652
+L+VKNL DE LR F I G I S +V +
Sbjct: 340 --NLYVKNLTDDIDDEKLRDLF---IGFGNITSARVMR 372
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR-TKDGKSRQFAFIGFRTEQEAEEAIK 59
+ + VKNL VT + R+ F + GEIT A L R + GKSR F F+ F A A++
Sbjct: 235 TNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVE 294
Query: 60 YFN 62
N
Sbjct: 295 DLN 297
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK-HLKNGKNVSMGFGFIEFDSVETA 675
++F+KNL+ ++ L F G ILS KV + N K G+GF+ +++ E A
Sbjct: 143 NVFIKNLDTAIDNKALHDTFAAF---GNILSCKVAQDEFGNSK----GYGFVHYETAEAA 195
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
TN + + G +L+ + + AKKD Q K E + T + V+N+
Sbjct: 196 TNAIKHVNGMLLNEKKVFVGHHIAKKDRQ-SKFEEMKANFTNVYVKNL 242
>gi|168039508|ref|XP_001772239.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676409|gb|EDQ62892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 507
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 39/252 (15%)
Query: 288 SKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
S D+ + +FV + TE++LR S G+V EV ++ DKDT ++KG A+V +
Sbjct: 114 SGDLLKRPPHGSEIFVGGITRDTTEEDLRTLCSSCGDVYEVRLLKDKDTGQNKGYAFVTF 173
Query: 348 AIPESASRAIEVLDNSIFQGRLLHVMPARHK---------KSSDKQELHNSTSQGTKTLK 398
E A +AIE L++S +GR L ++ K K+ +K+EL + S+ ++
Sbjct: 174 LNEECAEKAIETLNDSEVKGRKLRFSQSQSKHRLFVGNIPKTWEKEELESVLSEQGPGIQ 233
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGE 458
E K + G + + + E+ R+ +SKS + R+
Sbjct: 234 SV--ELLKDPKTPGRNRGFGFVEYYNHACAEHARRE--MSKS----------SFRLGTNA 279
Query: 459 TQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKF 518
+ A +G +VS++ + V V+NLP +E +L K+F +
Sbjct: 280 PTI----SWADPRSGPDVSAMSQVK------------VVYVRNLPDSVTEEQLQKLFERH 323
Query: 519 GSLDKVILPSTK 530
G + KV+LP+TK
Sbjct: 324 GEIVKVVLPATK 335
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKS-RQFAFIGFRTEQEAEEAIK 59
+ V+NLP VTE++L+ F + GEI L TK G++ R F F+ F +A +AI+
Sbjct: 302 VYVRNLPDSVTEEQLQKLFERHGEIVKVVLPATKPGQAKRDFGFVHFSDRAQALKAIE 359
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S I V + + TE+ LR S G++ + +L++ KD G+++ +AF+ F E+ AE+AI+
Sbjct: 125 SEIFVGGITRDTTEEDLRTLCSSCGDVYEVRLLKDKDTGQNKGYAFVTFLNEECAEKAIE 184
Query: 60 YFNKSYLDTCRISCEIARK-----VGDPNMPRPWSRYSLK 94
N S + ++ ++ VG N+P+ W + L+
Sbjct: 185 TLNDSEVKGRKLRFSQSQSKHRLFVG--NIPKTWEKEELE 222
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++VRNLP + TE++L++ F + G + +V + K + + +V ++ A +AIE
Sbjct: 302 VYVRNLPDSVTEEQLQKLFERHGEIVKVVLPATKPGQAKRDFGFVHFSDRAQALKAIEKT 361
Query: 361 DNSIFQGRLLHVM---PARHKKSSDKQELHNSTSQGTKTLKQRR 401
+ +GR+L P K+++ + + G Q R
Sbjct: 362 EVYELEGRILETSLAKPPAEKRAAGGEPAYPPQRAGLLPQHQNR 405
>gi|320586503|gb|EFW99173.1| rnp domain containing protein [Grosmannia clavigera kw1407]
Length = 194
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E ++S +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV ++ P
Sbjct: 62 KEDVDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSEPSL 121
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V+P R
Sbjct: 122 VAQAL-VLNESVFKGRNIKVVPKR 144
>gi|448112633|ref|XP_004202146.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
gi|359465135|emb|CCE88840.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
Length = 625
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 188/468 (40%), Gaps = 84/468 (17%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
V GN + D Q S L+V L + E L E FS G VS + + D TK+
Sbjct: 30 VSSGNEGEDAADSSQLPDTSASLYVGELNPSVNEALLFEIFSPVGQVSSIRVCRDAVTKK 89
Query: 339 SKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKS-----------------S 381
S G AYV + E +AIE L+ S+ GR +M ++ S
Sbjct: 90 SLGYAYVNFHKLEDGEKAIEELNYSLIDGRPCRIMWSQRDPSLRRNGEGNIFIKNLHPAI 149
Query: 382 DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSD 441
D + LH++ S K L + A++ GN+K + F+ +T A V+
Sbjct: 150 DNKALHDTFSAFGKILSC-----KVATDEQGNSKCFG--FVHYETAEAAKAAIENVNGML 202
Query: 442 LLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKN 501
L DRE + +G+ V + ++ S EE A T+ VKN
Sbjct: 203 LNDRE-------VYVGK-HVSKKDRE---------SKFEEMKANFTN--------VYVKN 237
Query: 502 LPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYK 556
+ SE E+ K+F +G + + L +K V F A A + L K
Sbjct: 238 IDLGFSEEEMRKLFEPYGKITSLHLEKDAEGKSKGFGFVNFESHEAAVKAVEELNDKDIN 297
Query: 557 GVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESR 616
G LY+ A K ++ + + +++A R + +GV
Sbjct: 298 GQKLYVGRA----------QKKRERIEELKRQYEAARLEKLSKYQGV------------- 334
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+LFVKNL+ L + F G I S +V ++GK S GFGF+ F S E AT
Sbjct: 335 NLFVKNLDDSIDSVKLEEEFKPF---GTITSARVMVD-EHGK--SKGFGFVCFSSPEEAT 388
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVA 724
++ + G L + L +KD + + ++ ++ ++ ++N A
Sbjct: 389 KAITEMNQRMFHGKPLYVALAQ-RKDVRRSQLEQQIQARNQMRMQNAA 435
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + +L + F G IT A++M + GKS+ F F+ F + +EA +AI N
Sbjct: 336 LFVKNLDDSIDSVKLEEEFKPFGTITSARVMVDEHGKSKGFGFVCFSSPEEATKAITEMN 395
Query: 63 KSYLDTCRISCEIARK 78
+ + +A++
Sbjct: 396 QRMFHGKPLYVALAQR 411
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN+ +E+ +R F G+IT L + +GKS+ F F+ F + + A +A++
Sbjct: 231 TNVYVKNIDLGFSEEEMRKLFEPYGKITSLHLEKDAEGKSKGFGFVNFESHEAAVKAVEE 290
Query: 61 FN 62
N
Sbjct: 291 LN 292
>gi|380491263|emb|CCF35443.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 203
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E ++S +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P
Sbjct: 73 KEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 132
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V+P R
Sbjct: 133 VAQAL-VLNESVFKGRNIKVVPKR 155
>gi|327301915|ref|XP_003235650.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326463002|gb|EGD88455.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 149
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+LF+ L + T+D LRE FSKFG + E +V D+DT RS+G +V ++ A A+
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNA 64
Query: 360 LDNSIFQGRLLHV 372
++N F GR++ V
Sbjct: 65 MNNQEFDGRVIRV 77
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKY 60
++ + L + T+D LR+ FS+ G I +A +++ +D +SR F F+ F ++ EA+ A+
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNA 64
Query: 61 FNKSYLD 67
N D
Sbjct: 65 MNNQEFD 71
>gi|11359595|pir||T49743 probable rrm-type rna binding protein [imported] - Neurospora
crassa
gi|40882336|emb|CAF06158.1| probable RRM-type RNA binding protein [Neurospora crassa]
Length = 215
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E ++S +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P
Sbjct: 80 KEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 139
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V+P R
Sbjct: 140 VAQAL-VLNESVFKGRNIKVVPKR 162
>gi|403347285|gb|EJY73063.1| RNA-binding protein 34 [Oxytricha trifallax]
Length = 412
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+F+ NLP+ +++LR HF G + V +V DKD KGIAYV + E ++IE
Sbjct: 231 IFIGNLPWVLNDEDLRAHFEDCGKILNVRVVRDKDNFIGKGIAYVQFKTKEEMRKSIETK 290
Query: 361 DNSIFQGRLLHVMPA 375
+ S+F+GR L + A
Sbjct: 291 NRSLFRGRELRIKKA 305
>gi|350286752|gb|EGZ67999.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 215
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E ++S +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P
Sbjct: 80 KEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 139
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V+P R
Sbjct: 140 VAQAL-VLNESVFKGRNIKVVPKR 162
>gi|348550266|ref|XP_003460953.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Cavia
porcellus]
Length = 273
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V N+ Y T +EL HF + G V V I+ DK + KG AYV +A SA A+E L
Sbjct: 144 IYVGNVDYGGTAEELEAHFHRCGEVHRVTILCDKFSGHPKGYAYVEFATQRSAQAAVE-L 202
Query: 361 DNSIFQGRLLHVMPAR 376
D SIF+GR L V+P R
Sbjct: 203 DESIFRGRALKVLPKR 218
>gi|357457753|ref|XP_003599157.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355488205|gb|AES69408.1| Cold-inducible RNA-binding protein [Medicago truncatula]
Length = 134
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ ++FV+ L ++ TE++L E FS++GNV + IV++K KR KG YV +A E A +A
Sbjct: 31 TSKIFVKGLAFSTTEEKLAEAFSQYGNVVKADIVLNKAKKRCKGFGYVTFAEEEEARKAQ 90
Query: 358 EVLDNSIFQGRLLHV--MPARHKKSSDKQELHNS 389
++ I GR+L+V P +K+ KQ N+
Sbjct: 91 IGMNGKILHGRVLYVDMDPPNEQKNKIKQATKNT 124
>gi|331228813|ref|XP_003327073.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306063|gb|EFP82654.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 637
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 284 PSSSSKDVQQEVL--ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
P+ + +D +E L ES LFV NLP++AT+D + E F+++G+V+ V + D +T+R KG
Sbjct: 442 PAENKRDFSKEELSAESTTLFVGNLPFSATQDSVWEIFAEYGDVNSVRLPTDPETQRVKG 501
Query: 342 IAYVLYAIPESASRAIE-------VLDNSIFQGRLLHVMP 374
YV +A ESA A+E +DN Q RL P
Sbjct: 502 FGYVEFATLESARAAVEKGRGEGVYIDNR--QARLDFSQP 539
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
NPS +E +++ ++V L + + L+ F G + + ++ D+DT++SKG
Sbjct: 344 NPSPKKAKAAEEGIKN--VYVGGLSWNVDSEWLKSEFESCGPIVDARVITDRDTQKSKGF 401
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHV---------MPARHKKSSDKQELH 387
Y+ + E A +AIE + + GR L V PA +K+ K+EL
Sbjct: 402 GYIDFETCEGAQKAIETKNGTELDGRTLKVDLSAPRAERAPAENKRDFSKEELS 455
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 616 RSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETA 675
++++V L++ E L+ F G I+ +V K S GFG+I+F++ E A
Sbjct: 358 KNVYVGGLSWNVDSEWLKSEFESC---GPIVDARVITDRDTQK--SKGFGYIDFETCEGA 412
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKS-------STKLLVRNVAFEA 727
GT LDG L + L A + E+ + ++D S ST L V N+ F A
Sbjct: 413 QKAIETKNGTELDGRTLKVDLS-APRAERAPAENKRDFSKEELSAESTTLFVGNLPFSA 470
>gi|269859929|ref|XP_002649688.1| RNA-binding protein MRD1 [Enterocytozoon bieneusi H348]
gi|220066883|gb|EED44353.1| RNA-binding protein MRD1 [Enterocytozoon bieneusi H348]
Length = 421
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+RI VK+LP++V E LR+ F + G+ITD ++ T DG R+ FIG+ + +EA +AI Y
Sbjct: 2 NRIVVKDLPRFVKECELREIFEKHGKITDLYMVTTPDGIFRRICFIGYASHEEAVQAINY 61
Query: 61 FNKSYLDTCRISCEIA 76
N S + +I E+
Sbjct: 62 RNNSMIHNHKIKIEMC 77
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 117/279 (41%), Gaps = 40/279 (14%)
Query: 417 WNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNV 476
+N+LF V +N++ ++K L+D +L V++AL E+ ++A+T+K L G+++
Sbjct: 179 FNTLFFNFQMVYKNVSEIENIAKECLIDITNKNLGVQMALLESSLVAQTQKFLMKNGIDL 238
Query: 477 SSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKTLALVV 536
E K ++ S+ V + + Y+ I PS + LA+V
Sbjct: 239 HQKTELDK-KVLIVRCSDIVGALGLIKYNKRSS---------------IAPS-RCLAIVE 281
Query: 537 FLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALL 596
F EA + K + ++ +Y E+ + + + + + + + ++ + L
Sbjct: 282 FETEKEAESTQKQINLRQLHNNIIYAEYCVKKIECMENVNIDSVSDHSNLQTQNSNKYPL 341
Query: 597 EQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKN 656
Q + L +KNL F+ + L+ F G I+ V++ KN
Sbjct: 342 LQ-----------------KKLCIKNLPFQASKDELKLLFAGF---GNIVDVRIP---KN 378
Query: 657 GKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQ 695
S GFGFI F+ +T + L G L+L+
Sbjct: 379 NMGRSRGFGFITFEDPKTIDKIIEQCSNMHLYGRRLVLE 417
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
L +L ++NLP+ A++DEL+ F+ FGN+ +V I + RS+G ++ + P++ +
Sbjct: 341 LLQKKLCIKNLPFQASKDELKLLFAGFGNIVDVRI-PKNNMGRSRGFGFITFEDPKTIDK 399
Query: 356 AIEVLDNSIFQGRLL 370
IE N GR L
Sbjct: 400 IIEQCSNMHLYGRRL 414
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
++C+KNLP ++D L+ F+ G I D ++ + G+SR F FI F + ++ I+
Sbjct: 345 KLCIKNLPFQASKDELKLLFAGFGNIVDVRIPKNNMGRSRGFGFITFEDPKTIDKIIEQC 404
Query: 62 NKSYLDTCRISCEIARK 78
+ +L R+ E A+K
Sbjct: 405 SNMHLYGRRLVLEKAQK 421
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R+ V++LP E ELRE F K G ++++++V D + I ++ YA E A +AI
Sbjct: 3 RIVVKDLPRFVKECELREIFEKHGKITDLYMVTTPDGIFRR-ICFIGYASHEEAVQAINY 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNS 389
+NS+ + + KK S E +++
Sbjct: 62 RNNSMIHNHKIKIEMCEEKKLSSNPESYDT 91
>gi|388581139|gb|EIM21449.1| hypothetical protein WALSEDRAFT_38416, partial [Wallemia sebi CBS
633.66]
Length = 866
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 114/258 (44%), Gaps = 39/258 (15%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S LF+ NLP++ T + L FS G V +V D +TK SKG+ YV YA+ E A A
Sbjct: 6 SSTLFISNLPFSLTNESLLTAFSDVGPVKSAFVVADHETKESKGVGYVTYAMREDAVAAS 65
Query: 358 EVLDNSIFQG-----RLLHVMPARHK---KSSDKQELHNSTSQ--GTKTLKQRREEERKA 407
++ + G R V AR + K +Q N S G KT KQR RK
Sbjct: 66 TEMNGKLITGEGNDKRKCRVEWARQRATLKERKEQAKDNELSNVLGEKTQKQR---TRKV 122
Query: 408 SEASGNTKAWNSLFMR--PDTVVE----NIARKHG-VSKSDLLDREANDLA-VRIALGET 459
S A + A ++ + P V + RK G V DL D +D+A V+ ET
Sbjct: 123 STAK-DPDAIRTVVLSGLPTGVTQKEIYKKVRKIGNVESVDLKD---DDIAHVKF---ET 175
Query: 460 QVIAETK---------KALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGE 510
IA K T + V + LE +GK +RS +V+NL ++ + +
Sbjct: 176 PSIANKALPKLHAHIFKGKTISAVLLKRLETAVSGKGKVSRRSR--LIVRNLNFNITRDD 233
Query: 511 LAKMFGKFGSLDKVILPS 528
L F FG + + LP+
Sbjct: 234 LKATFIPFGDIHSITLPT 251
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 296 LESG-RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
LE G LFVRN+P+ AT+++L + F KFG + + +D +T+RS+G +V +
Sbjct: 413 LEDGLTLFVRNIPFEATQEDLYDVFRKFGKLRYARVTMDYETERSRGNGFVAF 465
>gi|255585455|ref|XP_002533421.1| RNA binding protein, putative [Ricinus communis]
gi|223526734|gb|EEF28964.1| RNA binding protein, putative [Ricinus communis]
Length = 152
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ R+ V+NL Y+ E L++ FS FG ++EV +V D + KRSK ++ Y + A A+
Sbjct: 43 ASRIIVKNLGYSVGESSLQKEFSNFGEIAEVKLVKDDERKRSKAFVFIQYTCQDDAILAM 102
Query: 358 EVLDNSIFQGRLLHVMPAR--------HKKSSDKQELH 387
E +D IF GRL++V A+ + K+S LH
Sbjct: 103 ENMDRKIFDGRLIYVDLAKPGKETFRGYPKASGPPPLH 140
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIK 59
SRI VKNL V E L+ FS GEI + KL++ + K S+ F FI + + +A A++
Sbjct: 44 SRIIVKNLGYSVGESSLQKEFSNFGEIAEVKLVKDDERKRSKAFVFIQYTCQDDAILAME 103
Query: 60 YFNKSYLDTCRISCEIAR 77
++ D I ++A+
Sbjct: 104 NMDRKIFDGRLIYVDLAK 121
>gi|403417917|emb|CCM04617.1| predicted protein [Fibroporia radiculosa]
Length = 671
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 170/403 (42%), Gaps = 49/403 (12%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V L T TE L E F+ G V+ + + D T+RS G AYV Y RA+E L
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQL 105
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ S +GR +M ++ + K T QG +K +E+ ++A +T A
Sbjct: 106 NYSSIKGRACRIMWSQRDPALRK------TGQGNIFIKNL--DEQIDNKALHDTFAAFGN 157
Query: 421 FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLE 480
+ + R G EA + A++ G ++ KK G ++S E
Sbjct: 158 VLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAVNG---MLLNDKKVYV--GYHISRKE 212
Query: 481 EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALV 535
S K + +K VKN + +E E +F +FGS+ ++ ++ V
Sbjct: 213 RQS--KLEEMKAQFTNIYVKNFDPEVTEEEFMALFQQFGSVTSAVIQRDDEGRSRGFGFV 270
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRAL 595
F EA A +GL +KG L++ S+ +K + E + +++
Sbjct: 271 NFEVHDEAQKAVEGLHDLDFKGKKLFV-------------SRAQKKAER---EQELRQSY 314
Query: 596 LEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLK 655
+ ++E ++ + + +L++KNL D+ LR F G I S KV ++
Sbjct: 315 EQAKMEKMS-------KFQGVNLYIKNLEDDLDDDRLRTEFEPF---GSITSAKV---MR 361
Query: 656 NGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
+ K S GFGF+ F S + AT ++ ++ L + L
Sbjct: 362 DEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQ 404
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
+ I VKN VTE+ F Q G +T A + R +G+SR F F+ F EA++A++
Sbjct: 225 TNIYVKNFDPEVTEEEFMALFQQFGSVTSAVIQRDDEGRSRGFGFVNFEVHDEAQKAVE 283
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 125/300 (41%), Gaps = 26/300 (8%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G +F++NL L + F+ FGNV + D + RSKG +V Y E+A AI+
Sbjct: 132 GNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATD-EHGRSKGYGFVHYETAEAAETAIK 190
Query: 359 VLDNSIFQGRLLHVMPARHKKSSDKQ-ELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
++ + + ++V H ++Q +L +Q T + + E E +
Sbjct: 191 AVNGMLLNDKKVYV--GYHISRKERQSKLEEMKAQFTNIYVKNFDPEVTEEE-------F 241
Query: 418 NSLFMRPDTVVENIARKHGVSKS---DLLDREANDLAVRIALGETQVIAETKKALTNAGV 474
+LF + +V + ++ +S ++ E +D A + G + + KK +
Sbjct: 242 MALFQQFGSVTSAVIQRDDEGRSRGFGFVNFEVHDEAQKAVEGLHDLDFKGKKLFVSRAQ 301
Query: 475 NVSSLEE-----FSAGKTDGLKRSNHVFL-VKNLPYDSSEGELAKMFGKFGSLD--KVIL 526
+ E+ + K + + + V L +KNL D + L F FGS+ KV+
Sbjct: 302 KKAEREQELRQSYEQAKMEKMSKFQGVNLYIKNLEDDLDDDRLRTEFEPFGSITSAKVMR 361
Query: 527 ---PSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAP-SDVLSQSSTSKGNQKN 582
++K V F P EA A + K PLY+ A DV Q S+ Q+N
Sbjct: 362 DEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQRRDVRRQQLESQIAQRN 421
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + +DRLR F G IT AK+MR + G S+ F F+ F + EA +A+ N
Sbjct: 330 LYIKNLEDDLDDDRLRTEFEPFGSITSAKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMN 389
Query: 63 KSYLDTCRISCEIARK 78
+ T + +A++
Sbjct: 390 NKMIGTKPLYVSLAQR 405
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
I +KNL + + L D F+ G + K+ + G+S+ + F+ + T + AE AIK N
Sbjct: 134 IFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAVN 193
Query: 63 KSYLD--TCRISCEIARK 78
L+ + I+RK
Sbjct: 194 GMLLNDKKVYVGYHISRK 211
>gi|326474784|gb|EGD98793.1| glycine-rich RNA-binding protein [Trichophyton tonsurans CBS
112818]
Length = 149
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+LF+ L + T+D LRE FSKFG + E +V D+DT RS+G +V ++ A A+
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNA 64
Query: 360 LDNSIFQGRLLHV 372
++N F GR++ V
Sbjct: 65 MNNQEFDGRVIRV 77
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKY 60
++ + L + T+D LR+ FS+ G I +A +++ +D +SR F F+ F ++ EA+ A+
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNA 64
Query: 61 FNKSYLD 67
N D
Sbjct: 65 MNNQEFD 71
>gi|259150114|emb|CAY86917.1| Nop4p [Saccharomyces cerevisiae EC1118]
Length = 685
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 15/111 (13%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
VD + + SK Q E +FVRN+PY ATE+ L HFSKFG+V V+DK T
Sbjct: 270 VDQASKNKESKRKAQNKREDFSVFVRNVPYDATEESLAAHFSKFGSVKYALPVIDKSTGL 329
Query: 339 SKGIAYVLYA-----------IPESASRAI----EVLDNSIFQGRLLHVMP 374
+KG A+V + P + S ++ +V+ +++GR+L + P
Sbjct: 330 AKGTAFVAFKDQYTYNECIKNAPAAGSTSLLIGDDVMPEYVYEGRVLSITP 380
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT-KRSKGI 342
PSS+ + L+ LFVR++P T+++L + FS F + H VV KDT KR++G
Sbjct: 11 PSSNVSKQNDDGLDMKTLFVRSIPQDVTDEQLADFFSNFAPIK--HAVVVKDTNKRARGF 68
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK 383
+V +A+ + A+ + F G +L V A+ + S K
Sbjct: 69 GFVSFAVEDDIKEALAKARKTKFNGHILRVDIAKRRDRSKK 109
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 45/76 (59%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ V+++P+ VT+++L DFFS I A +++ + ++R F F+ F E + +EA+
Sbjct: 28 LFVRSIPQDVTDEQLADFFSNFAPIKHAVVVKDTNKRARGFGFVSFAVEDDIKEALAKAR 87
Query: 63 KSYLDTCRISCEIARK 78
K+ + + +IA++
Sbjct: 88 KTKFNGHILRVDIAKR 103
>gi|296811816|ref|XP_002846246.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
gi|238843634|gb|EEQ33296.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
Length = 133
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+LF+ L + T+D LR+ FSKFG + E +V D+DT RS+G +V ++ A A+
Sbjct: 5 KLFIGGLAWHTTDDTLRDGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSNESEADAALNA 64
Query: 360 LDNSIFQGRLLHVMPARHKKS 380
++N F GR++ V A + S
Sbjct: 65 MNNQEFDGRVIRVDKATERSS 85
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKY 60
++ + L + T+D LRD FS+ G I +A +++ +D +SR F F+ F E EA+ A+
Sbjct: 5 KLFIGGLAWHTTDDTLRDGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSNESEADAALNA 64
Query: 61 FNKSYLDTCRISCEIA 76
N D I + A
Sbjct: 65 MNNQEFDGRVIRVDKA 80
>gi|402225283|gb|EJU05344.1| polyadenylate binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 716
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 165/413 (39%), Gaps = 65/413 (15%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V L TE L E F+ G V+ V + D T+RS G AYV Y RA++ L
Sbjct: 76 LYVGELDPQVTEAMLFEIFNMIGPVASVRVCRDAVTRRSLGYAYVNYLNYNDGERALDQL 135
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ S +G+ +M ++ K T QG +K + + KA +
Sbjct: 136 NYSQIRGKPCRIMWSQRDPGLRK------TGQGNIFIKNL--------DQGIDNKALHDT 181
Query: 421 FMRPDTVV--------ENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNA 472
F TV+ +++ +G D EA + A++ G ++ KK
Sbjct: 182 FAAFGTVLSCKVATDDSGLSKGYGFVHYD--SNEAAEAAIKAVNG---MLLNDKKVFV-- 234
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP----- 527
G ++S E S K D +K VKNL + E E +F +FG + ++
Sbjct: 235 GQHISRKERQS--KIDEMKSHFTNLYVKNLDTEVGEEEFEGLFSQFGPITSAVIQKDEEG 292
Query: 528 STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVG 587
++K V F +A A + L K G P+++ A Q + +
Sbjct: 293 NSKGFGFVNFENHEDAQRAVEELDNKEIHGKPVFVGRA------QKKSER---------- 336
Query: 588 EHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS 647
E + ++ + + E + + +L++KNL DE LR F G I S
Sbjct: 337 EEELRKQYEQAKYEKA-------GKYQGSNLYIKNLEDDVDDEKLRAEFEPF---GTITS 386
Query: 648 VKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
KV +++ K S GFGF+ F S + AT ++ I+ L + L K
Sbjct: 387 CKV---MRDEKGTSKGFGFVCFSSPDEATRAMSEMNNKIVGTKPLYVALAQRK 436
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+++NL +++LR F FG ++ ++ D + SKG +V ++ P+ A+RA+ +
Sbjct: 360 LYIKNLEDDVDDEKLRAEFEPFGTITSCKVMRD-EKGTSKGFGFVCFSSPDEATRAMSEM 418
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLK 398
+N I + L+V A+ +K KQ+L + +Q L+
Sbjct: 419 NNKIVGTKPLYVALAQ-RKDVRKQQLESQIAQRNNQLR 455
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S + +KNL V +++LR F G IT K+MR + G S+ F F+ F + EA A+
Sbjct: 358 SNLYIKNLEDDVDDEKLRAEFEPFGTITSCKVMRDEKGTSKGFGFVCFSSPDEATRAMSE 417
Query: 61 FNKSYLDTCRISCEIARK 78
N + T + +A++
Sbjct: 418 MNNKIVGTKPLYVALAQR 435
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
+ + VKNL V E+ FSQ G IT A + + ++G S+ F F+ F ++A+ A++
Sbjct: 255 TNLYVKNLDTEVGEEEFEGLFSQFGPITSAVIQKDEEGNSKGFGFVNFENHEDAQRAVE 313
>gi|410953832|ref|XP_003983574.1| PREDICTED: polyadenylate-binding protein 1-like [Felis catus]
Length = 616
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 170/411 (41%), Gaps = 51/411 (12%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L TE L E FS G + + + D T+RS G AY+ + P A RA++ +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ + +G+ + +M ++ K G + + E+ ++A +T +
Sbjct: 73 NFEVIRGQPIRIMWSQRDPGLRKS--------GVGNIFIKNLEDSIDNKALYDTFSTFGN 124
Query: 421 FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLE 480
+ V +N HG + E ++ A + + ++ +K G S E
Sbjct: 125 ILSCKVVCDN----HGSRGFGFVHFETHEAAQQAIVTMNGMLLNDRKVFV--GHFKSRRE 178
Query: 481 EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVIL-----PSTKTLALV 535
+ ++ +N VKNL D E L +F +FG + V + ++ V
Sbjct: 179 REAELGARAMEFTN--IYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDSGHSRGFGFV 236
Query: 536 VFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRAL 595
F + EA A + K +G LY+ A V Q+ + KR
Sbjct: 237 NFEKHEEAQKAVTDMNGKEVRGRLLYVGRAQKRVERQN----------------ELKRRF 280
Query: 596 LEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLK 655
+ + + +T R + +L+VKNL+ DE LR+ F + G I S KV +
Sbjct: 281 EQMKQDRLT-------RYQGVNLYVKNLDDSIDDEKLRREFSPY---GVITSAKV---MT 327
Query: 656 NGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV 706
G + S GFGF+ F S E AT ++ G I+ L + L K++ + +
Sbjct: 328 EGGH-SKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I VKNL V E L+D FSQ G++ K+MR G SR F F+ F +EA++A+
Sbjct: 191 TNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVTD 250
Query: 61 FN 62
N
Sbjct: 251 MN 252
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + +++LR FS G IT AK+M T+ G S+ F F+ F + +EA +A+ N
Sbjct: 296 LYVKNLDDSIDDEKLRREFSPYGVITSAKVM-TEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 63 KSYLDTCRISCEIARK 78
+ T + +A++
Sbjct: 355 GRIVGTKPLYVALAQR 370
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E ++V+NL E L++ FS+FG + V ++ D D+ S+G +V + E A +
Sbjct: 188 MEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRD-DSGHSRGFGFVNFEKHEEAQK 246
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQ 384
A+ ++ +GRLL+V R +K ++Q
Sbjct: 247 AVTDMNGKEVRGRLLYV--GRAQKRVERQ 273
>gi|349581770|dbj|GAA26927.1| K7_Nop4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 685
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 15/111 (13%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
VD + + SK Q E +FVRN+PY ATE+ L HFSKFG+V V+DK T
Sbjct: 270 VDQASKNKESKRKAQNKREDFSVFVRNVPYDATEESLAAHFSKFGSVKYALPVIDKSTGL 329
Query: 339 SKGIAYVLYA-----------IPESASRAI----EVLDNSIFQGRLLHVMP 374
+KG A+V + P + S ++ +V+ +++GR+L + P
Sbjct: 330 AKGTAFVAFKDQYTYNECIKNAPAAGSTSLLIGDDVMPEYVYEGRVLSITP 380
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT-KRSKGI 342
PSS+ + L+ LFVR++P T+++L + FS F + H VV KDT KRS+G
Sbjct: 11 PSSNVSKQNDDGLDMKTLFVRSIPQDVTDEQLADFFSNFAPIK--HAVVVKDTNKRSRGF 68
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK 383
+V +A+ + A+ + F G +L V A+ + S K
Sbjct: 69 GFVSFAVEDDTKEALAKARKTKFNGHILRVDIAKRRDRSKK 109
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 45/76 (59%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ V+++P+ VT+++L DFFS I A +++ + +SR F F+ F E + +EA+
Sbjct: 28 LFVRSIPQDVTDEQLADFFSNFAPIKHAVVVKDTNKRSRGFGFVSFAVEDDTKEALAKAR 87
Query: 63 KSYLDTCRISCEIARK 78
K+ + + +IA++
Sbjct: 88 KTKFNGHILRVDIAKR 103
>gi|83643344|ref|YP_431779.1| RNA-binding protein [Hahella chejuensis KCTC 2396]
gi|83631387|gb|ABC27354.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 92
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y TED+LRE F+ +G++S V+I+ D+DT +SKG +V + A AI+ L
Sbjct: 3 IYVGNLSYQVTEDDLREAFAAYGDISNVNIIRDRDTGQSKGFGFVEMSDNGQAEEAIQKL 62
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQEL 386
+ S +GR + V AR ++ K+
Sbjct: 63 NESNLKGRNMKVNEARPREEKPKRNF 88
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKYF 61
I V NL VTED LR+ F+ G+I++ ++R +D G+S+ F F+ +AEEAI+
Sbjct: 3 IYVGNLSYQVTEDDLREAFAAYGDISNVNIIRDRDTGQSKGFGFVEMSDNGQAEEAIQKL 62
Query: 62 NKSYLDTCRISCEIAR 77
N+S L + AR
Sbjct: 63 NESNLKGRNMKVNEAR 78
>gi|78185978|ref|YP_374021.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78165880|gb|ABB22978.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 99
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+++ NLPY+ +ED+LR+ FS+FG V +I++DK + RSKG +V + E+ AIE +
Sbjct: 12 IYIGNLPYSVSEDDLRDAFSQFGQVDSANIIMDKFSGRSKGFGFVDMSSDEAGRAAIEAM 71
Query: 361 DNSIFQGRLLHV 372
+ F+GR + V
Sbjct: 72 NEQEFKGRTIKV 83
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKYF 61
I + NLP V+ED LRD FSQ G++ A ++ K G+S+ F F+ +++ AI+
Sbjct: 12 IYIGNLPYSVSEDDLRDAFSQFGQVDSANIIMDKFSGRSKGFGFVDMSSDEAGRAAIEAM 71
Query: 62 NK 63
N+
Sbjct: 72 NE 73
>gi|6325213|ref|NP_015282.1| Nop4p [Saccharomyces cerevisiae S288c]
gi|585573|sp|P37838.1|NOP4_YEAST RecName: Full=Nucleolar protein 4; AltName: Full=Nucleolar protein
NOP77
gi|420394|gb|AAA20590.1| Nop4p [Saccharomyces cerevisiae]
gi|1171415|gb|AAB68177.1| Nop4p: RNA recognition motif-containing protein [Saccharomyces
cerevisiae]
gi|285815494|tpg|DAA11386.1| TPA: Nop4p [Saccharomyces cerevisiae S288c]
gi|392295968|gb|EIW07071.1| Nop4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 685
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 15/111 (13%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
VD + + SK Q E +FVRN+PY ATE+ L HFSKFG+V V+DK T
Sbjct: 270 VDQASKNKESKRKAQNKREDFSVFVRNVPYDATEESLAPHFSKFGSVKYALPVIDKSTGL 329
Query: 339 SKGIAYVLYA-----------IPESASRAI----EVLDNSIFQGRLLHVMP 374
+KG A+V + P + S ++ +V+ +++GR+L + P
Sbjct: 330 AKGTAFVAFKDQYTYNECIKNAPAAGSTSLLIGDDVMPEYVYEGRVLSITP 380
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT-KRSKGI 342
PSS+ + L+ LFVR++P T+++L + FS F + H VV KDT KRS+G
Sbjct: 11 PSSNVSKQNDDGLDMKTLFVRSIPQDVTDEQLADFFSNFAPIK--HAVVVKDTNKRSRGF 68
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK 383
+V +A+ + A+ + F G +L V A+ + S K
Sbjct: 69 GFVSFAVEDDTKEALAKARKTKFNGHILRVDIAKRRDRSKK 109
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 45/76 (59%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ V+++P+ VT+++L DFFS I A +++ + +SR F F+ F E + +EA+
Sbjct: 28 LFVRSIPQDVTDEQLADFFSNFAPIKHAVVVKDTNKRSRGFGFVSFAVEDDTKEALAKAR 87
Query: 63 KSYLDTCRISCEIARK 78
K+ + + +IA++
Sbjct: 88 KTKFNGHILRVDIAKR 103
>gi|378727388|gb|EHY53847.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 179
Score = 65.9 bits (159), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 47/74 (63%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
+LF+ L + T++ L E FS+FGN+ E +V D+DT RS+G +V +A A A++
Sbjct: 2 AKLFIGGLAWHTTDETLYEGFSQFGNIEEAVVVKDRDTNRSRGFGFVRFATKAEADEAMQ 61
Query: 359 VLDNSIFQGRLLHV 372
++N+ F GRL+ V
Sbjct: 62 RMNNTQFDGRLIRV 75
Score = 44.7 bits (104), Expect = 0.19, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
+++ + L + T++ L + FSQ G I +A +++ +D +SR F F+ F T+ EA+EA++
Sbjct: 2 AKLFIGGLAWHTTDETLYEGFSQFGNIEEAVVVKDRDTNRSRGFGFVRFATKAEADEAMQ 61
Query: 60 YFNKSYLD 67
N + D
Sbjct: 62 RMNNTQFD 69
>gi|299747315|ref|XP_002911154.1| polyadenylate-binding protein 2 [Coprinopsis cinerea okayama7#130]
gi|298407463|gb|EFI27660.1| polyadenylate-binding protein 2 [Coprinopsis cinerea okayama7#130]
Length = 194
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V N+ Y+AT +E++ HF G ++ V I+ DK T KG AYV +A PE A+ +
Sbjct: 79 IYVGNVDYSATPEEIQAHFQACGVINRVTILCDKFTGHPKGYAYVEFAEPEHVDAAV-AM 137
Query: 361 DNSIFQGRLLHVMPAR 376
DNS+F+GRLL V R
Sbjct: 138 DNSLFKGRLLKVTAKR 153
>gi|521090|emb|CAA53824.1| NOP77p [Saccharomyces cerevisiae]
gi|151942750|gb|EDN61096.1| nucleolar protein [Saccharomyces cerevisiae YJM789]
gi|256270510|gb|EEU05694.1| Nop4p [Saccharomyces cerevisiae JAY291]
gi|323335081|gb|EGA76371.1| Nop4p [Saccharomyces cerevisiae Vin13]
Length = 685
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 15/111 (13%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
VD + + SK Q E +FVRN+PY ATE+ L HFSKFG+V V+DK T
Sbjct: 270 VDQASKNKESKRKAQNKREDFSVFVRNVPYDATEESLAAHFSKFGSVKYALPVIDKSTGL 329
Query: 339 SKGIAYVLYA-----------IPESASRAI----EVLDNSIFQGRLLHVMP 374
+KG A+V + P + S ++ +V+ +++GR+L + P
Sbjct: 330 AKGTAFVAFKDQYTYNECIKNAPAAGSTSLLIGDDVMPEYVYEGRVLSITP 380
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT-KRSKGI 342
PSS+ + L+ LFVR++P T+++L + FS F + H VV KDT KRS+G
Sbjct: 11 PSSNVSKQNDDGLDMKTLFVRSIPQDVTDEQLADFFSNFAPIK--HAVVVKDTNKRSRGF 68
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK 383
+V +A+ + A+ + F G +L V A+ + S K
Sbjct: 69 GFVSFAVEDDTKEALAKARKTKFNGHILRVDIAKRRDRSKK 109
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 45/76 (59%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ V+++P+ VT+++L DFFS I A +++ + +SR F F+ F E + +EA+
Sbjct: 28 LFVRSIPQDVTDEQLADFFSNFAPIKHAVVVKDTNKRSRGFGFVSFAVEDDTKEALAKAR 87
Query: 63 KSYLDTCRISCEIARK 78
K+ + + +IA++
Sbjct: 88 KTKFNGHILRVDIAKR 103
>gi|388567211|ref|ZP_10153648.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
gi|388265594|gb|EIK91147.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
Length = 97
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L+V NLPY+ +D LR +FS+FGNV+ ++ D+D+ RSKG +V A A AI
Sbjct: 2 SSKLYVGNLPYSVNDDSLRHNFSEFGNVASAKVMTDRDSGRSKGFGFVEMASEAEAQAAI 61
Query: 358 EVLDNSIFQGRLLHVMPARHKK 379
L+ GR + V +R K+
Sbjct: 62 NGLNGQSVDGRQIVVNVSRPKE 83
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S++ V NLP V +D LR FS+ G + AK+M +D G+S+ F F+ +E EA+ AI
Sbjct: 3 SKLYVGNLPYSVNDDSLRHNFSEFGNVASAKVMTDRDSGRSKGFGFVEMASEAEAQAAIN 62
Query: 60 YFNKSYLDTCRISCEIAR 77
N +D +I ++R
Sbjct: 63 GLNGQSVDGRQIVVNVSR 80
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 615 SRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVET 674
S L+V NL + D++LR +F E G + S KV +G+ S GFGF+E S
Sbjct: 2 SSKLYVGNLPYSVNDDSLRHNFSEF---GNVASAKVMTDRDSGR--SKGFGFVEMASEAE 56
Query: 675 ATNVCRDLQGTILDGHALILQLCHAKK 701
A L G +DG +++ + K+
Sbjct: 57 AQAAINGLNGQSVDGRQIVVNVSRPKE 83
>gi|312283705|ref|NP_001073956.2| embryonic polyadenylate-binding protein 2 [Homo sapiens]
gi|205716472|sp|A6NDY0.1|EPAB2_HUMAN RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
Length = 278
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 271 EEDANGEIVDP---GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSE 327
E A G+++ P G P S + + + E + ++V N+ Y + +EL HFS+ G V
Sbjct: 117 EGTAAGQLLSPETVGCPLSGTPEEKVEA-DHRSVYVGNVDYGGSAEELEAHFSRCGEVHR 175
Query: 328 VHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
V I+ DK + KG AY+ +A S A+E LD S+F+GR++ V+P R
Sbjct: 176 VTILCDKFSGHPKGYAYIEFATKGSVQAAVE-LDQSLFRGRVIKVLPKR 223
>gi|420396656|ref|ZP_14895875.1| RNA binding protein [Helicobacter pylori CPY1313]
gi|393013514|gb|EJB14690.1| RNA binding protein [Helicobacter pylori CPY1313]
Length = 82
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+AT ++++E FS+FG V V ++ D+ TK+ KG +V E S AI L
Sbjct: 4 IYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRKTKKPKGFGFVEMQ-EEGVSEAIAKL 62
Query: 361 DNSIFQGRLLHVMPARHKKS 380
DN+ F GR++ V A KKS
Sbjct: 63 DNTDFMGRMIRVTEANPKKS 82
>gi|425453862|ref|ZP_18833615.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9807]
gi|389799968|emb|CCI20517.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9807]
Length = 97
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP+ ++++ E F+++G + VH+ +D++TKR +G A+V PE S AI L
Sbjct: 3 IYVGNLPFEVDQNDVVEVFTEYGTIKRVHLPMDRETKRKRGFAFVEMETPEQESAAIAAL 62
Query: 361 DNSIFQGRLLHVMPARHKK 379
D + + GR L V AR K+
Sbjct: 63 DGAQWMGRELKVNQAREKE 81
>gi|116783558|gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S ++FV L Y + LRE F+ FG+V E I+ D++T RS+G +V +A P+ A+ A+
Sbjct: 38 SSKVFVGGLSYGVDDQTLRESFATFGDVMEAKIINDRETGRSRGFGFVTFASPDEANAAV 97
Query: 358 EVLDNSIFQGRLLHVMPARHK 378
E +D QGR + V A+ +
Sbjct: 98 EAMDGKDLQGRSIRVNIAQER 118
>gi|406860694|gb|EKD13751.1| polyadenylate-binding protein 2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 194
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 61/97 (62%), Gaps = 8/97 (8%)
Query: 287 SSKDVQ-------QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS 339
+S DVQ +E ++S +FV N+ Y+AT ++++ HF G+++ V I++DK T
Sbjct: 46 ASLDVQSHDLSDDKEDIDSRSIFVGNVDYSATPEDIQAHFESCGSINRVTILLDKFTGHP 105
Query: 340 KGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
KG AYV + P ++A+ VL++S+F GR L V+P R
Sbjct: 106 KGYAYVEFTEPTLVAQAL-VLNDSMFHGRNLKVVPKR 141
>gi|432877083|ref|XP_004073098.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Oryzias
latipes]
Length = 347
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 22/261 (8%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
++ +LFV L +D LR+HF +FG + + +V K +RS+ +V Y PE A+ A
Sbjct: 4 QACKLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTYLTPEEANAA 63
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ-GTKTLKQRREEERKASEASGNTK 415
+ +++ +G + V A KK +D+ E + LK +E+ S +
Sbjct: 64 MAASPHTV-EGNWVEVKRAVPKKQADESEARAKVKKIFVGGLKNDIQEDDLTDYFSQYGE 122
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI----AETKKALTN 471
NS + T +K G D A D+AV + ++ E KKA+
Sbjct: 123 VENSEIISEKTT----GKKRGFGFVHFTDDYAADMAVAVPF---HIVNGHRVEVKKAVPK 175
Query: 472 AGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSL-DKVILPS-- 528
+ + + K ++ +F V L D+++ L K F +FG+L D ++P
Sbjct: 176 QEMQIKPNTSYDLPKM--FNQACKLF-VGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKT 232
Query: 529 ---TKTLALVVFLEPVEAAAA 546
++ V +L P EA AA
Sbjct: 233 AQRSRCFGFVTYLTPEEANAA 253
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 286 SSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYV 345
++S D+ + ++ +LFV L +D LR+HF +FG + + +V K +RS+ +V
Sbjct: 183 NTSYDLPKMFNQACKLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFV 242
Query: 346 LYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQE 385
Y PE A+ A+ +++ +G + V A KK +D+ E
Sbjct: 243 TYLTPEEANAAMAASPHTV-EGNWVEVKRAVPKKQADESE 281
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAI 58
+I V L + ED L D+FSQ GE+ +++++ K GK R F F+ F + A+ A+
Sbjct: 98 KIFVGGLKNDIQEDDLTDYFSQYGEVENSEIISEKTTGKKRGFGFVHFTDDYAADMAV 155
>gi|164651984|gb|ABY64767.1| ePABP2 [Homo sapiens]
Length = 278
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 271 EEDANGEIVDP---GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSE 327
E A G+++ P G P S + + + E + ++V N+ Y + +EL HFS+ G V
Sbjct: 117 EGTAAGQLLSPETVGCPLSGTPEEKVEA-DHRSVYVGNVDYGGSAEELEAHFSRCGEVHR 175
Query: 328 VHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
V I+ DK + KG AY+ +A S A+E LD S+F+GR++ V+P R
Sbjct: 176 VTILCDKFSGHPKGYAYIEFATKGSVQAAVE-LDQSLFRGRVIKVLPKR 223
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 285 SSSSKDVQQEV--LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
S S+ + Q + + S +LF+ L Y+ + LRE F K+G V E ++VD++T RS+G
Sbjct: 24 SVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFYKYGEVIEARVIVDRETGRSRGF 83
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPA 375
+V + E AS AI+ LD GR + V A
Sbjct: 84 GFVTFTSSEEASSAIQALDGQDLHGRRVRVNYA 116
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ S LF+ L++ T D +LR+ F K G ++ +V + G+ S GFGF+ F S
Sbjct: 37 MSSSKLFIGGLSYSTDDTSLREAF---YKYGEVIEARVIVDRETGR--SRGFGFVTFTSS 91
Query: 673 ETATNVCRDLQGTILDGH 690
E A++ + L G L G
Sbjct: 92 EEASSAIQALDGQDLHGR 109
>gi|356572637|ref|XP_003554474.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 317
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
++GRL+V NLPY+ T EL E F + G V+ V IV D+ T RS+G A+V E A A
Sbjct: 106 DAGRLYVGNLPYSITNSELGELFGEAGTVASVEIVYDRVTDRSRGFAFVTMGSVEDAKEA 165
Query: 357 IEVLDNSIFQGRLLHV 372
I + D S GR + V
Sbjct: 166 IRMFDGSQVGGRTVKV 181
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+++ NL + T LRE F++ V ++ ++D+ RS+G +V + ESA A+++
Sbjct: 212 KIYAGNLGWGLTSQGLREAFAEQPGVLSAKVIYERDSGRSRGFGFVSFETAESARAALDI 271
Query: 360 LDNSIFQGRLLHV 372
++ QGR L +
Sbjct: 272 MNGVEVQGRPLRL 284
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLM--RTKDGKSRQFAFIGFRTEQEAEEAIK 59
R+ V NLP +T L + F + G + +++ R D +SR FAF+ + ++A+EAI+
Sbjct: 109 RLYVGNLPYSITNSELGELFGEAGTVASVEIVYDRVTD-RSRGFAFVTMGSVEDAKEAIR 167
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPR 86
F+ S + + KV P +P+
Sbjct: 168 MFDGSQVGGRTV------KVNFPEVPK 188
>gi|162455692|ref|YP_001618059.1| RNA recognition motif-containing protein [Sorangium cellulosum So
ce56]
gi|161166274|emb|CAN97579.1| RNA-binding region RNP-1 (RNA recognition motif) [Sorangium
cellulosum So ce56]
Length = 139
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 52/79 (65%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL+V NLP++AT+ ++ F++ G V++VHIV D+++ +S+G +V PE A +AIE
Sbjct: 4 RLYVGNLPFSATKASVQAAFAQSGEVTDVHIVTDRESGQSRGFGFVTMGTPEQAQQAIEN 63
Query: 360 LDNSIFQGRLLHVMPARHK 378
++ ++ GR L V A +
Sbjct: 64 MNGAMMDGRPLRVNEAEER 82
Score = 46.6 bits (109), Expect = 0.049, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
+R+ V NLP T+ ++ F+Q GE+TD ++ ++ G+SR F F+ T ++A++AI+
Sbjct: 3 TRLYVGNLPFSATKASVQAAFAQSGEVTDVHIVTDRESGQSRGFGFVTMGTPEQAQQAIE 62
Query: 60 YFNKSYLD 67
N + +D
Sbjct: 63 NMNGAMMD 70
>gi|406907930|gb|EKD48603.1| RNA-binding protein [uncultured bacterium]
Length = 100
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLPY+ TED LRE F +FG+VS +VVD+ + RSKG A+V + E AIE L
Sbjct: 3 IYVGNLPYSITEDSLRELFEQFGDVSSTKVVVDQISGRSKGFAFVDMSNDEEGEAAIEKL 62
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQ 384
+ GR + V A+ + D +
Sbjct: 63 NGHELDGRTIVVNKAKPRAPRDSK 86
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKYF 61
I V NLP +TED LR+ F Q G+++ K++ + G+S+ FAF+ ++E E AI+
Sbjct: 3 IYVGNLPYSITEDSLRELFEQFGDVSSTKVVVDQISGRSKGFAFVDMSNDEEGEAAIEKL 62
Query: 62 NKSYLDTCRISCEIARKVGDPNMPR 86
N LD I A+ P PR
Sbjct: 63 NGHELDGRTIVVNKAK----PRAPR 83
>gi|119177425|ref|XP_001240490.1| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
gi|320032129|gb|EFW14085.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|392867546|gb|EAS29215.2| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
Length = 147
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+LF+ L + T++ LR+ FSKFG++ E +V D+DT RS+G +V +A A A+
Sbjct: 3 KLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMNE 62
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTS 391
++N F GR + V A + S + + N ++
Sbjct: 63 MNNQEFDGRTIRVDKAADRPSGPRNDGFNRSN 94
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S++ + L + T++ LR FS+ G I +A +++ +D +SR F F+ F +E EAE A+
Sbjct: 2 SKLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMN 61
Query: 60 YFNKSYLDTCRISCEIARKVGD-PNMPR 86
N D I + K D P+ PR
Sbjct: 62 EMNNQEFDGRTIRVD---KAADRPSGPR 86
>gi|151555091|gb|AAI48674.1| Similar to poly(A)binding protein nuclear-like 1 [synthetic
construct]
gi|162319022|gb|AAI56596.1| Similar to poly(A)binding protein nuclear-like 1 [synthetic
construct]
gi|261860988|dbj|BAI47016.1| Embryonic polyadenylate-binding protein 2 [synthetic construct]
Length = 289
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 271 EEDANGEIVDP---GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSE 327
E A G+++ P G P S + + + E + ++V N+ Y + +EL HFS+ G V
Sbjct: 117 EGTAAGQLLSPETVGCPLSGTPEEKVEA-DHRSVYVGNVDYGGSAEELEAHFSRCGEVHR 175
Query: 328 VHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
V I+ DK + KG AY+ +A S A+E LD S+F+GR++ V+P R
Sbjct: 176 VTILCDKFSGHPKGYAYIEFATKGSVQAAVE-LDQSLFRGRVIKVLPKR 223
>gi|258568356|ref|XP_002584922.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906368|gb|EEP80769.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 745
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFVR+LP +AT + L E+FS+ + V D TK+ KG +V + E A RA+E L
Sbjct: 48 LFVRSLPASATTESLTEYFSQSYPIKHATAVADPQTKQCKGYGFVTFTDVEDAQRALEEL 107
Query: 361 DNSIFQGR--LLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERK 406
+ SIF GR ++ V R ++ +K +++ TK +K+ RE+ RK
Sbjct: 108 NGSIFDGRKIVIEVAEPRRREIDEKVGKSVPSAEATK-VKEEREQRRK 154
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
+F+RNLP+ AT++ L EHF++FG V +VVD +T R +G A+V +
Sbjct: 324 IFIRNLPFGATDETLGEHFAQFGAVRYARVVVDPETDRPRGTAFVCF 370
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 27/130 (20%)
Query: 616 RSLFVKNLNFKTCDENLRKHFGEH--IKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
R+LFV++L E+L ++F + IK ++ K K G+GF+ F VE
Sbjct: 46 RTLFVRSLPASATTESLTEYFSQSYPIKHATAVADPQTKQCK-------GYGFVTFTDVE 98
Query: 674 TATNVCRDLQGTILDGHALILQLCHAKK---DEQV---VKKAE------------KDKSS 715
A +L G+I DG +++++ ++ DE+V V AE KD
Sbjct: 99 DAQRALEELNGSIFDGRKIVIEVAEPRRREIDEKVGKSVPSAEATKVKEEREQRRKDAQP 158
Query: 716 TKLLVRNVAF 725
KL+VRN+ +
Sbjct: 159 PKLIVRNLPW 168
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ S +LFV + Y+ + LRE F+++G V +V +++D++T RS+G ++ +A E AS
Sbjct: 37 MSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASS 96
Query: 356 AIEVLDNSIFQGRLLHVMPARHK 378
AI+ +D GR + V A +
Sbjct: 97 AIQGMDGQDLHGRRIRVNYATER 119
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ S LFV +++ T D +LR+ F + G ++ VKV + G+ S GFGFI F +
Sbjct: 37 MSSAKLFVGGISYSTDDMSLRESFARY---GEVIDVKVIMDRETGR--SRGFGFITFATS 91
Query: 673 ETATNVCRDLQGTILDGHALILQLC 697
E A++ + + G L G + +
Sbjct: 92 EDASSAIQGMDGQDLHGRRIRVNYA 116
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 11 YVTED-RLRDFFSQKGEITDAK-LMRTKDGKSRQFAFIGFRTEQEAEEAIKYFNKSYLDT 68
Y T+D LR+ F++ GE+ D K +M + G+SR F FI F T ++A AI+ + L
Sbjct: 49 YSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASSAIQGMDGQDLHG 108
Query: 69 CRISCEIARKVGDP 82
RI A + P
Sbjct: 109 RRIRVNYATERSRP 122
>gi|330796051|ref|XP_003286083.1| hypothetical protein DICPUDRAFT_30303 [Dictyostelium purpureum]
gi|325083991|gb|EGC37430.1| hypothetical protein DICPUDRAFT_30303 [Dictyostelium purpureum]
Length = 89
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 43/60 (71%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S R+FV LP++ + L+ HFSKFG VS+ ++V+D+ T+RSKG +V +A PE+A A+
Sbjct: 2 SSRIFVARLPWSICKVALKNHFSKFGPVSDGYVVLDRITRRSKGYGFVTFATPEAAEHAV 61
>gi|323449089|gb|EGB04980.1| hypothetical protein AURANDRAFT_31715 [Aureococcus anophagefferens]
Length = 95
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ RL+V NLPYT T D+LR+HF+ FG +++ + D+ T RS+G V ++ P +A +I
Sbjct: 20 ASRLYVGNLPYTMTTDQLRDHFASFGRITDCIVKADQATGRSRGFGIVEFSEPSAAENSI 79
Query: 358 EVLDNSIFQGRLLHV 372
+ +N +GR L V
Sbjct: 80 DRWNNRSLEGRPLVV 94
Score = 45.4 bits (106), Expect = 0.11, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIK 59
SR+ V NLP +T D+LRD F+ G ITD + + G+SR F + F AE +I
Sbjct: 21 SRLYVGNLPYTMTTDQLRDHFASFGRITDCIVKADQATGRSRGFGIVEFSEPSAAENSID 80
Query: 60 YFNKSYLD 67
+N L+
Sbjct: 81 RWNNRSLE 88
>gi|302693014|ref|XP_003036186.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
gi|300109882|gb|EFJ01284.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
Length = 632
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 175/414 (42%), Gaps = 57/414 (13%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L T TE L E F+ G V+ + + D T+RS G AYV Y RA+
Sbjct: 45 SASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 104
Query: 358 EVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
E L+ S+ + R +M ++ + K T QG +K E+ + KA
Sbjct: 105 EQLNYSLIKNRPCRIMWSQRDPALRK------TGQGNIFIKNLDEQI--------DNKAL 150
Query: 418 NSLFMRPDTVVE-NIAR-KHGVSKS-DLLDREANDLAVRIALGETQVIAETKKALTNAGV 474
+ F V+ +A +HG SK + E + A ++ KK G
Sbjct: 151 HDTFAAFGNVLSCKVATDEHGNSKGYGFVHYETAEAAENAIKNVNGMLLNDKKVYV--GH 208
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----ST 529
++S E S K D +K +KN+ + ++ E +F + G++ ++ +
Sbjct: 209 HISRKERQS--KIDEMKAQFTNLYIKNIDPEVTDEEFEALFREQGNVTSSVIQRDEEGRS 266
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH 589
+ V + EA A L K + G L++ S+ +K + E
Sbjct: 267 RGFGFVNYETHEEAQKAVDNLNDKDFHGRKLFV-------------SRAQKKAER---EE 310
Query: 590 DAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVK 649
+ ++A + +LE ++ + + +L+VKNL+ DE LR F G I S K
Sbjct: 311 ELRKAHEQARLEKLS-------KYQGLNLYVKNLDDDVDDEKLRAEFEPF---GTITSAK 360
Query: 650 VKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDE 703
V +++ K VS GFGF+ + S E A+ ++ ++ L + HA++ E
Sbjct: 361 V---MRDDKGVSKGFGFVCYSSPEEASKAVAEMNNKMIGSKPLY--VSHAQRRE 409
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V+NL +++LR F FG ++ ++ D D SKG +V Y+ PE AS+A+ +
Sbjct: 332 LYVKNLDDDVDDEKLRAEFEPFGTITSAKVMRD-DKGVSKGFGFVCYSSPEEASKAVAEM 390
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQ 399
+N + + L+V A+ ++ +Q+L + +Q + + Q
Sbjct: 391 NNKMIGSKPLYVSHAQ-RREVRRQQLESQIAQRNQIMHQ 428
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KN+ VT++ F ++G +T + + R ++G+SR F F+ + T +EA++A+
Sbjct: 227 TNLYIKNIDPEVTDEEFEALFREQGNVTSSVIQRDEEGRSRGFGFVNYETHEEAQKAVDN 286
Query: 61 FN 62
N
Sbjct: 287 LN 288
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL V +++LR F G IT AK+MR G S+ F F+ + + +EA +A+ N
Sbjct: 332 LYVKNLDDDVDDEKLRAEFEPFGTITSAKVMRDDKGVSKGFGFVCYSSPEEASKAVAEMN 391
Query: 63 KSYLDT 68
+ +
Sbjct: 392 NKMIGS 397
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G+LF+ L Y TE L E FSK+G +++V ++ D++T RS+G +V + PE A A+
Sbjct: 5 GKLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMA 64
Query: 359 VLDNSIFQGRLLHV 372
++ GR++ V
Sbjct: 65 AMNGKQVDGRMIRV 78
>gi|425442381|ref|ZP_18822630.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
gi|389716645|emb|CCH99152.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
Length = 98
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP+ ++++ E F ++G + VH+ +D++TKR +G A+V PE ++AI L
Sbjct: 3 IYVGNLPFEVDQEDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFVEMETPEQEAKAIAAL 62
Query: 361 DNSIFQGRLLHVMPARHK 378
D + + GR L V AR K
Sbjct: 63 DGAQWMGRELKVNQAREK 80
>gi|357457685|ref|XP_003599123.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
gi|355488171|gb|AES69374.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
Length = 685
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
P SS E ++S +FV N+ + AT+D L HF+KFG V +V IV D T + KG A
Sbjct: 496 PGSSVAGRPTEDVDSRTIFVSNVHFAATKDALSRHFNKFGEVLKVIIVTDAATGQPKGAA 555
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
YV + + E+A A+ LD + F R+L V+
Sbjct: 556 YVEFMLKEAADNALS-LDGTSFMSRILKVV 584
>gi|296423589|ref|XP_002841336.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637573|emb|CAZ85527.1| unnamed protein product [Tuber melanosporum]
Length = 732
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+F+R+LPYTAT + L HFS + +V D TK+S+G +V + PE A +A++
Sbjct: 49 VFIRSLPYTATTESLSTHFSFIAPLKHATVVADPVTKKSRGFGFVTFLDPEDAQKAVKQF 108
Query: 361 DNSIFQGRLLHVMPA--RHKKSS 381
+ + F GR L V A RH++++
Sbjct: 109 NGAEFGGRRLKVEIAEKRHRETA 131
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 158/367 (43%), Gaps = 47/367 (12%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR---TKDGKSRQFAFIGFRTEQEAEEAIK 59
+ +++LP T + L FS + A ++ TK KSR F F+ F ++A++A+K
Sbjct: 49 VFIRSLPYTATTESLSTHFSFIAPLKHATVVADPVTK--KSRGFGFVTFLDPEDAQKAVK 106
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDE-KNPVLAAKRGEKKTI 118
FN + R+ EIA K R+ +E +SE E K G KK
Sbjct: 107 QFNGAEFGGRRLKVEIAEK-----------RH---RETALSEGEVKKGKTVDGEGVKKRA 152
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWAN-DTLIGLMADQKAKVSENISQAIKGGEKSIT 177
++ + P V +P K++ + + G++ +K N+ G +T
Sbjct: 153 PRLIVRNLP-----WSVKKPEDLVKIFQSYGKVRGVIIPRKG----NMPNGPMSGFAFVT 203
Query: 178 LHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDD 237
+ + N I EK+ D +D+ + K +W + +D D D+++
Sbjct: 204 MKGYKNAENAI------EKTNGMEIDGRTVAVDW--AAEKNEWEQKKEAEDMDIDGDEEE 255
Query: 238 DGEEEEEEENDHNG------DSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDV 291
GE+ E+ ++ +G D E D+ S G ED + + + V
Sbjct: 256 KGEDAAEDSDEGSGVGVIGDDDAESMDNASDASSDEGSDIEDFDDDEDERNGTQKKFYSV 315
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHF-SKFGNVSEVHIVVDKDTKRSKGIAYVLYAIP 350
++E +S +F+RNLP++ ++ L EHF S FG V IV+D T+R +G +V +
Sbjct: 316 EEE--KSLTVFIRNLPFSTDDETLHEHFKSSFGPVRYARIVMDHATERPRGTGFVCFFNK 373
Query: 351 ESASRAI 357
E R +
Sbjct: 374 EDCDRCL 380
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 20/132 (15%)
Query: 611 DRVESRSLFVKNLNFKTCDENLRKHFG--EHIKEGRILSVKVKKHLKNGKNVSMGFGFIE 668
D ++ R++F+++L + E+L HF +K +++ V K S GFGF+
Sbjct: 42 DTLKRRTVFIRSLPYTATTESLSTHFSFIAPLKHATVVADPVTKK-------SRGFGFVT 94
Query: 669 FDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSST-----------K 717
F E A + G G L +++ + E + + E K T +
Sbjct: 95 FLDPEDAQKAVKQFNGAEFGGRRLKVEIAEKRHRETALSEGEVKKGKTVDGEGVKKRAPR 154
Query: 718 LLVRNVAFEAQR 729
L+VRN+ + ++
Sbjct: 155 LIVRNLPWSVKK 166
>gi|220905282|ref|YP_002480594.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869581|gb|ACL49916.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 88
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++ATE+++++ F+++GNV V +V D+DT R++G +V E+ S AIE L
Sbjct: 5 IYVGNLPWSATEEQVQDLFAEYGNVLSVKLVSDRDTGRARGFGFVEMEDGEADS-AIEAL 63
Query: 361 DNSIFQGRLLHVMPARHK 378
DN F GR L V A+ +
Sbjct: 64 DNFSFGGRTLRVNEAKPR 81
>gi|357442985|ref|XP_003591770.1| RNA-binding protein [Medicago truncatula]
gi|355480818|gb|AES62021.1| RNA-binding protein [Medicago truncatula]
Length = 284
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Query: 283 NPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
N +SS+ Q+ +++ +LFV L + +E LR F FG + EV +++DK +KRSKG
Sbjct: 176 NMPNSSEASQEASVKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIIDKISKRSKGY 235
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHV-----MPARHKK 379
A++ Y E+AS A++ ++ I G ++ V P R+ K
Sbjct: 236 AFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPPRYNK 277
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
V+++ LFV L+F T ++ LR F EG V+VK + S G+ FIE+ +
Sbjct: 189 VKTKKLFVTGLSFYTSEKTLRAAF-----EGFGELVEVKVIIDKISKRSKGYAFIEYTTE 243
Query: 673 ETATNVCRDLQGTILDGHALIL 694
E A+ +++ G I++G +++
Sbjct: 244 EAASAALKEMNGKIINGWMIVV 265
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIKY 60
++ V L Y +E LR F GE+ + K++ K K S+ +AFI + TE+ A A+K
Sbjct: 193 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIIDKISKRSKGYAFIEYTTEEAASAALKE 252
Query: 61 FNKSYLDTCRISCEIAR 77
N ++ I ++A+
Sbjct: 253 MNGKIINGWMIVVDVAK 269
>gi|126137970|ref|XP_001385508.1| Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein) (PABP) (ARS consensus binding
protein ACBP-67) (Polyadenylate tail-binding protein)
[Scheffersomyces stipitis CBS 6054]
gi|158513407|sp|A3LXL0.1|PABP_PICST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|126092786|gb|ABN67479.1| Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein) (PABP) (ARS consensus binding
protein ACBP-67) (Polyadenylate tail-binding protein)
[Scheffersomyces stipitis CBS 6054]
Length = 632
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 182/442 (41%), Gaps = 76/442 (17%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V L + E L E FS G VS + + D +K+S G AYV Y E +AIE L
Sbjct: 54 LYVGELNTSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKMEDGEKAIEEL 113
Query: 361 DNSIFQGRLLHVMPARHKKSS-----------------DKQELHNSTSQGTKTLKQRREE 403
+ S +GR +M ++ S+ D + LH++ S K L
Sbjct: 114 NYSPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSTFGKILSC---- 169
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIA 463
+ A++ G +K + F+ +T A V+ L DRE + +G+ I+
Sbjct: 170 -KVATDDMGQSKCFG--FVHYETAEAAEAAIENVNGMLLNDRE-------VFVGKH--IS 217
Query: 464 ETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDK 523
+ + S EE A T+ VKN+ + SE +L K+F +G++
Sbjct: 218 KKDRE--------SKFEEIKANFTN--------IYVKNIDLEYSEEDLKKLFTPYGAITS 261
Query: 524 VILPSTKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKND 583
+ L +A KG + Y+G E A V + QK
Sbjct: 262 IYLEK-------------DAEGKSKGFGFVNYEG----HEAAVKAVEELNDKEINGQK-- 302
Query: 584 AVVGEHDAKRALLEQQLEGVTDADIDP-DRVESRSLFVKNLNFKTCDENLRKHFGEHIKE 642
VG KR +E+ + + ++ + + +LF+KNL+ E L + F
Sbjct: 303 IYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPF--- 359
Query: 643 GRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD 702
G I S +V + GK S GFGF+ F S E AT ++ + G L + L +KD
Sbjct: 360 GTITSARVMVD-ETGK--SKGFGFVCFSSPEEATKAITEMNQRMFFGKPLYVALAQ-RKD 415
Query: 703 EQVVKKAEKDKSSTKLLVRNVA 724
+ + ++ ++ ++ ++N A
Sbjct: 416 VRRSQLEQQIQARNQMRMQNAA 437
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL + ++L + F G IT A++M + GKS+ F F+ F + +EA +AI N
Sbjct: 338 LFIKNLDDTIDSEKLEEEFKPFGTITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMN 397
Query: 63 K 63
+
Sbjct: 398 Q 398
>gi|449437482|ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449528229|ref|XP_004171108.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 323
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E+G+L++ NLPY T +L E F++ G+V V ++ DK T RS+G A+V A E A A
Sbjct: 113 EAGKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEA 172
Query: 357 IEVLDNSIFQGRLLHV 372
I + D S GR + V
Sbjct: 173 IRMFDGSQIGGRTVRV 188
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKY 60
++ + NLP +T +L + F++ G + +++ K +SR FAF+ T +EA+EAI+
Sbjct: 116 KLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 175
Query: 61 FNKSYLD--TCRISCEIARKVGDPNMPRPWSRYSLKK 95
F+ S + T R++ + G+ + P R S K
Sbjct: 176 FDGSQIGGRTVRVNFPEVPRGGEKEVMGPRIRSSYNK 212
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKY 60
+I NL +T LRD F + I AK++ + GKSR F F+ F T ++AE A++
Sbjct: 219 KIYAGNLGWGLTSQSLRDAFENQPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALES 278
Query: 61 FN 62
N
Sbjct: 279 MN 280
>gi|449433511|ref|XP_004134541.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 2 [Cucumis sativus]
gi|449490650|ref|XP_004158666.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 2 [Cucumis sativus]
Length = 153
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ RL VRNLPY+ E L+E FS F V + D+ TKR KG A++ Y + A A+
Sbjct: 44 ASRLMVRNLPYSTNESRLQEEFSNF-----VLLAKDRSTKRPKGYAFIQYTCQDDAMLAL 98
Query: 358 EVLDNSIFQGRLLHV 372
E +D IF GR+++V
Sbjct: 99 ETMDCKIFDGRMIYV 113
>gi|392575547|gb|EIW68680.1| hypothetical protein TREMEDRAFT_44501 [Tremella mesenterica DSM
1558]
Length = 938
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 41/280 (14%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+FV +LP++AT +L HFS G V I DK T +SKG+ YV Y++ E A A++ L
Sbjct: 30 IFVSSLPFSATTTDLLTHFSFLGPVRHGFIATDKTTGKSKGVGYVTYSLKEDAETAVKEL 89
Query: 361 DNSIF--QGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWN 418
D S F +GR + V A K+ K+ S G K R E S + A
Sbjct: 90 DGSEFGDKGRKIRVEWA-DKRPPPKERAAKEIS-GAKARAARPVIE------STDPAAIR 141
Query: 419 SLFMR--PDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVI----AETKKALTNA 472
+L + P + +N+ K V K+D +R + V A+ ++ A+ KA+
Sbjct: 142 TLVLTGLPKELEKNVLWKK-VRKTD--ERIQLEHPVEGAVDTAHLVFPSHADALKAIPKL 198
Query: 473 GVNV---SSLEEFSAGKTDGLKRSNHV--FLVKNLPYDSSEGELAKMFGKFGSLDKVILP 527
+ S L + + L +++H +V+NL +D++E +L F +G + + LP
Sbjct: 199 HGHTYKGSILSCVLKKRLEKLGKTSHAGRLIVRNLSWDTTEQDLRATFLPYGPIQSIDLP 258
Query: 528 S-----------------TKTLALVVFLEPVEAAAAFKGL 550
+ + A V FL +A A +G+
Sbjct: 259 TLPSKLPSNPDKAPPPPRARGFAFVWFLSKADAERAIQGV 298
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
LF+RNLP+ TE EL F FG + I +DK T RS+G +V + E A +A+E
Sbjct: 430 LFIRNLPFEVTEQELNTLFRSFGPLRYAKITLDKTTGRSRGTGFVCFWKTEHADKALE 487
>gi|336466383|gb|EGO54548.1| hypothetical protein NEUTE1DRAFT_69316 [Neurospora tetrasperma FGSC
2508]
Length = 229
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E ++S +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P
Sbjct: 94 KEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 153
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V+P R
Sbjct: 154 VAQAL-VLNESVFKGRNIKVVPKR 176
>gi|164426633|ref|XP_957585.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
gi|157071415|gb|EAA28349.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
Length = 229
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E ++S +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P
Sbjct: 94 KEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 153
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V+P R
Sbjct: 154 VAQAL-VLNESVFKGRNIKVVPKR 176
>gi|322698722|gb|EFY90490.1| poly(A) RNA binding protein [Metarhizium acridum CQMa 102]
Length = 742
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 167/425 (39%), Gaps = 94/425 (22%)
Query: 250 NGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYT 309
+GD+ D+ I G EDA+ PSS++ Q S L+V L +
Sbjct: 25 SGDAKPTVDTTI-----GAAGSEDASAPT-----PSSAAPHPQ----NSASLYVGELDPS 70
Query: 310 ATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRL 369
TE L E FS+ G V+ + + D T+RS G AYV Y +A+E L+ ++ +GR
Sbjct: 71 VTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALEELNYTLIKGRP 130
Query: 370 LHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQRREEERKASEASG 412
+M PA K D + LH++ + L + A + +G
Sbjct: 131 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSC-----KVAQDENG 185
Query: 413 NTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNA 472
N+K + + D A KH LL+ + + I + Q
Sbjct: 186 NSKGYGFVHYETDEAAHQ-AIKH--VNGMLLNEKKVYVGHHIPKKDRQ------------ 230
Query: 473 GVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP----- 527
S EE A T+ VKN+ ++S+ E ++F K+G + L
Sbjct: 231 ----SKFEEMKANFTN--------IYVKNISTEASDDEFRELFEKYGDITSSSLARDQEG 278
Query: 528 STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVG 587
++ V F AA A + L K ++G LY+ A K +++ + +
Sbjct: 279 KSRGFGFVNFTTHESAAKAVEELHGKDFRGQDLYVGRA----------QKKHEREEELRK 328
Query: 588 EHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS 647
++A R + +GV +L++KNL+ DE LR+ F E G I S
Sbjct: 329 SYEAARLEKANKYQGV-------------NLYIKNLDDDVDDEKLRQMFAEF---GPITS 372
Query: 648 VKVKK 652
KV +
Sbjct: 373 AKVMR 377
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
+ I VKN+ ++D R+ F + G+IT + L R ++GKSR F F+ F T + A +A++
Sbjct: 241 TNIYVKNISTEASDDEFRELFEKYGDITSSSLARDQEGKSRGFGFVNFTTHESAAKAVE 299
>gi|402085387|gb|EJT80285.1| polyadenylate-binding protein 2 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 200
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 86/149 (57%), Gaps = 10/149 (6%)
Query: 234 DDDDDGEEEEEEENDH----NGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSK 289
D+ D +E E+++NDH +G+ EE ++ K EE+A N ++
Sbjct: 7 DEHDAADEREQDDNDHGAGEDGNDEEEISAMKKRVAEM---EEEAAKLREMQANLDHQTQ 63
Query: 290 DVQQ--EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
++ + + ++S +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV +
Sbjct: 64 ELSESRDDVDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEF 123
Query: 348 AIPESASRAIEVLDNSIFQGRLLHVMPAR 376
P ++A+ VL+ S+F+GR + V+P R
Sbjct: 124 TEPSLVAQAL-VLNESVFKGRNIKVVPKR 151
>gi|315057077|ref|XP_003177913.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
gi|311339759|gb|EFQ98961.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+LF+ L + T+D LRE FS+FG + E +V D+DT RS+G +V ++ A A+
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSQFGTIEEAIVVKDRDTNRSRGFGFVRFSSEAEADAALNA 64
Query: 360 LDNSIFQGRLLHV 372
++N F GR++ V
Sbjct: 65 MNNQEFDGRVIRV 77
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKY 60
++ + L + T+D LR+ FSQ G I +A +++ +D +SR F F+ F +E EA+ A+
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSQFGTIEEAIVVKDRDTNRSRGFGFVRFSSEAEADAALNA 64
Query: 61 FNKSYLDTCRISCEIA 76
N D I + A
Sbjct: 65 MNNQEFDGRVIRVDKA 80
>gi|356555297|ref|XP_003545970.1| PREDICTED: uncharacterized protein LOC100787464 [Glycine max]
Length = 481
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
E ++S +FV N+ + AT+D L HF++FG+V +V IV D T + KG AYV + E+A
Sbjct: 301 EDVDSRTIFVSNVHFAATKDGLSRHFNRFGDVLKVIIVTDAATGQPKGAAYVEFMRKEAA 360
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQE 385
A+ LDN+ F R+L V+ KKS+ QE
Sbjct: 361 DNALS-LDNTSFMSRILKVI----KKSATPQE 387
>gi|90075670|dbj|BAE87515.1| unnamed protein product [Macaca fascicularis]
Length = 135
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESLDGRQIRV 79
Score = 41.6 bits (96), Expect = 1.7, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L HF ++ VK ++ + S GFGFI F + E
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQR-----SRGFGFITFTNPE 58
Query: 674 TATNVCRDLQGTILDGHALILQLCHAKK 701
A+ R + G LDG +++ HA K
Sbjct: 59 HASVAMRAMNGESLDGRQ--IRVDHAGK 84
>gi|440461571|gb|ELQ32355.1| polyadenylate-binding protein 2 [Magnaporthe oryzae Y34]
gi|440489256|gb|ELQ68921.1| polyadenylate-binding protein 2 [Magnaporthe oryzae P131]
Length = 213
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
++S +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P ++
Sbjct: 90 VDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGFAYVEFTEPSLVAQ 149
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
A+ VL+ S+F+GR + V P R
Sbjct: 150 AL-VLNESVFKGRNIKVSPKR 169
>gi|410340767|gb|JAA39330.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340769|gb|JAA39331.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340771|gb|JAA39332.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340773|gb|JAA39333.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340775|gb|JAA39334.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340777|gb|JAA39335.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + IPE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFPIPEHASVA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESLDGRQIRV 79
>gi|189423423|ref|YP_001950600.1| RNP-1 like RNA-binding protein [Geobacter lovleyi SZ]
gi|189419682|gb|ACD94080.1| RNP-1 like RNA-binding protein [Geobacter lovleyi SZ]
Length = 109
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +LPY AT D+LR FS G V+ VHI+ D T +SKG YV A AIE L
Sbjct: 5 LYVGHLPYEATADDLRRMFSVAGTVTSVHIITDPATGKSKGCGYVRMADEAQLHEAIECL 64
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNS--TSQGTKTLKQRREE 403
D ++ + R++ V A +K+ K + T G++ + R+++
Sbjct: 65 DGALMENRVITVSIANPQKAQTKPLTRGAGNTQPGSRRARARQKQ 109
>gi|357421081|ref|YP_004928530.1| RNP-1 RNA-binding protein [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
gi|354803591|gb|AER40705.1| RNP-1 RNA-binding protein [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
Length = 89
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT--KRSKGIAYVLYAIPESA 353
+++ +L+V NL Y TE EL+EHF G V+ I+ D+ T KRSKG ++ + E+A
Sbjct: 1 MDNTKLYVGNLSYEMTEQELKEHFESIGEVTHAKIIFDESTSNKRSKGFGFIEMSNEENA 60
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSD 382
+AIE L+ + F GR + V AR + D
Sbjct: 61 KKAIEKLNGTEFMGRNIIVSVARPRAKRD 89
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLM---RTKDGKSRQFAFIGFRTEQEAEEA 57
+++ V NL +TE L++ F GE+T AK++ T + +S+ F FI E+ A++A
Sbjct: 4 TKLYVGNLSYEMTEQELKEHFESIGEVTHAKIIFDESTSNKRSKGFGFIEMSNEENAKKA 63
Query: 58 IKYFNKSYLDTCRISCEIAR 77
I+ N + I +AR
Sbjct: 64 IEKLNGTEFMGRNIIVSVAR 83
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
L+V NL+++ ++ L++HF E I G + K+ S GFGFIE + E A
Sbjct: 6 LYVGNLSYEMTEQELKEHF-ESI--GEVTHAKIIFDESTSNKRSKGFGFIEMSNEENAKK 62
Query: 678 VCRDLQGTILDGHALILQLC--HAKKD 702
L GT G +I+ + AK+D
Sbjct: 63 AIEKLNGTEFMGRNIIVSVARPRAKRD 89
>gi|310800127|gb|EFQ35020.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 203
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E ++S +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P
Sbjct: 73 KEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 132
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V+P R
Sbjct: 133 VAQAL-VLNESVFKGRNIKVVPKR 155
>gi|224060337|ref|XP_002300149.1| predicted protein [Populus trichocarpa]
gi|222847407|gb|EEE84954.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 65.5 bits (158), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ S +LF+ LP++A + L++ FS FG V+E +++D++T RS+G +V Y E+AS
Sbjct: 33 MSSSKLFIGGLPWSADDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASE 92
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTK 395
A+ +D GR + V A ++ +N QG++
Sbjct: 93 ALSAMDGQNLGGRTVRVSFAEERRPPQS---YNDNHQGSR 129
Score = 40.0 bits (92), Expect = 5.2, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAK-LMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
S++ + LP + L+D FS GE+T+A+ +M + G+SR F F+ + + + A EA+
Sbjct: 36 SKLFIGGLPWSADDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEALS 95
Query: 60 YFNKSYLD--TCRISCEIARK 78
+ L T R+S R+
Sbjct: 96 AMDGQNLGGRTVRVSFAEERR 116
>gi|366991657|ref|XP_003675594.1| hypothetical protein NCAS_0C02380 [Naumovozyma castellii CBS 4309]
gi|342301459|emb|CCC69228.1| hypothetical protein NCAS_0C02380 [Naumovozyma castellii CBS 4309]
Length = 702
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 15/104 (14%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL--------YAI--- 349
+FVRN+PY ATE+ L HFSKFG V V+D+ T +KG A+V Y I
Sbjct: 305 IFVRNVPYDATEESLAAHFSKFGQVKYALPVIDRTTGLAKGTAFVAFRDHMTYKYCIDNA 364
Query: 350 PESASRAI----EVLDNSIFQGRLLHVMPARHKKSSDKQELHNS 389
P + S ++ +VL +++GR+L + P ++++++Q N+
Sbjct: 365 PAAGSTSLLIGDDVLPEYVYEGRVLSISPTLDRENANRQAEKNA 408
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 282 GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT-KRSK 340
GN +++ L+ LFVR++P T++EL ++FS F H VV KD K+S+
Sbjct: 9 GNHRNAAYKQNDNGLDMKTLFVRSIPMDVTDEELADYFSNFAPTK--HAVVVKDVNKKSR 66
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
G +V +A+ + A++ + +G LL V A+ + S+K + + T+T
Sbjct: 67 GFGFVSFAVEDDTKEALKQARKAKLKGHLLRVDIAKRRDRSNKPGEGDKPEKKTRTDTIA 126
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENI 431
R+E + E S L +P ++ N+
Sbjct: 127 RDENEEVDEES-------LLKGKPKLIIRNM 150
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ V+++P VT++ L D+FS A +++ + KSR F F+ F E + +EA+K
Sbjct: 28 LFVRSIPMDVTDEELADYFSNFAPTKHAVVVKDVNKKSRGFGFVSFAVEDDTKEALKQAR 87
Query: 63 KSYLDTCRISCEIARKVGDPNMP 85
K+ L + +IA++ N P
Sbjct: 88 KAKLKGHLLRVDIAKRRDRSNKP 110
>gi|297263082|ref|XP_001089948.2| PREDICTED: putative RNA-binding protein 3 [Macaca mulatta]
Length = 135
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVA 63
Query: 357 IEVLDNSIFQGRLLHVMPA 375
+ ++ GR + V A
Sbjct: 64 MRAMNGDSLDGRQIRVAHA 82
Score = 42.4 bits (98), Expect = 0.91, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L HF ++ VK ++ + S GFGFI F + E
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQR-----SRGFGFITFTNPE 58
Query: 674 TATNVCRDLQGTILDGHALILQLCHAKK 701
A+ R + G LDG +++ HA K
Sbjct: 59 HASVAMRAMNGDSLDGRQ--IRVAHAGK 84
>gi|226287551|gb|EEH43064.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 761
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 152/394 (38%), Gaps = 81/394 (20%)
Query: 282 GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
GN + +S S L+V L + TE L E FS G V+ + + D T+RS G
Sbjct: 37 GNETPNSAAPTNAQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLG 96
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHKKSS------------DKQ 384
AYV Y RA+E L+ ++ +G+ +M PA K D +
Sbjct: 97 YAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNK 156
Query: 385 ELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD 444
LH++ + L + A + GN+K + + N A KH LL+
Sbjct: 157 ALHDTFAAFGNILSCKV-----AQDEFGNSKGYGFVHYETAEAATN-AIKH--VNGMLLN 208
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPY 504
+ + IA + Q S EE A T+ VKNL
Sbjct: 209 EKKVFVGHHIAKKDRQ----------------SKFEEMKANFTN--------VYVKNLEP 244
Query: 505 DSSEGELAKMFGKFGSLDKVILP------STKTLALVVFLEPVEAAAAFKGLAYKRYKGV 558
+ + E ++F K+G + L ++ V F+ AAAA + L K YKG
Sbjct: 245 EVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVEDLNDKEYKGQ 304
Query: 559 PLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSL 618
LY+ A K +++ + + +H+A R + +GV +L
Sbjct: 305 KLYVGRA----------QKKHEREEELRKQHEAARVEKASKYQGV-------------NL 341
Query: 619 FVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK 652
+VKNL DE LR F I G I S +V +
Sbjct: 342 YVKNLTDDIDDEKLRDLF---IGFGNITSARVMR 372
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR-TKDGKSRQFAFIGFRTEQEAEEAIK 59
+ + VKNL VT + R+ F + GEIT A L R + GKSR F F+ F A A++
Sbjct: 235 TNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVE 294
Query: 60 YFN 62
N
Sbjct: 295 DLN 297
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK-HLKNGKNVSMGFGFIEFDSVETA 675
++F+KNL+ ++ L F G ILS KV + N K G+GF+ +++ E A
Sbjct: 143 NVFIKNLDTAIDNKALHDTFAAF---GNILSCKVAQDEFGNSK----GYGFVHYETAEAA 195
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
TN + + G +L+ + + AKKD Q K E + T + V+N+
Sbjct: 196 TNAIKHVNGMLLNEKKVFVGHHIAKKDRQ-SKFEEMKANFTNVYVKNL 242
>gi|242006841|ref|XP_002424253.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212507622|gb|EEB11515.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 529
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 20/185 (10%)
Query: 196 KSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDDDGEEEEEEENDHN-GDSN 254
K+K+ A+D SD+D K SD +E +++D D E E + ND N G
Sbjct: 126 KNKDDASDSETSDLD-----SKNIISDFNNETSIHKFENEDSDSEIETSDHNDENEGSDF 180
Query: 255 EECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGR-LFVRNLPYTATED 313
E+ +S D I G N + P PS + E G+ +F+RNLP++AT +
Sbjct: 181 EDSESEDDDDIKKKTG----NTNLKIPARPSDA---------EDGKTVFIRNLPFSATNE 227
Query: 314 ELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
+LRE+F +G++ I +DK T+ SKG +V + +SAS I+ +N Q + V
Sbjct: 228 DLRENFKAYGDIEYALICIDKLTEHSKGTGFVKFKTADSASACIKDSNNIYIQENPVTVT 287
Query: 374 PARHK 378
A K
Sbjct: 288 YALTK 292
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 1 SRICVKNLP-KYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 59
++I V+NLP K ++ED LR+ FS+ GEI + KL++ +GK F+ F+ A +AI
Sbjct: 10 AKIIVRNLPFKNLSEDTLRNLFSEYGEIEEIKLLKKSNGKLVGCGFVQFKKVTSAAKAIY 69
Query: 60 YFNKSYLDTCRISCEIA 76
Y N+ LD +I + A
Sbjct: 70 YGNQKELDGRKIVIDWA 86
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 299 GRLFVRNLPY-TATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
++ VRNLP+ +ED LR FS++G + E+ + + K + G +V + SA++AI
Sbjct: 10 AKIIVRNLPFKNLSEDTLRNLFSEYGEIEEIKL-LKKSNGKLVGCGFVQFKKVTSAAKAI 68
Query: 358 EVLDNSIFQGRLLHVMPARHKKS 380
+ GR + + A KK+
Sbjct: 69 YYGNQKELDGRKIVIDWALPKKT 91
>gi|430814566|emb|CCJ28224.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 685
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 179/441 (40%), Gaps = 67/441 (15%)
Query: 273 DANGEIVDPGNPSS---SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVH 329
+A G DP S+ S V Q S L+V L + TE L E F+ G V+ +
Sbjct: 42 EAAGSADDPSRLSAGANSGVPVSQNNSNSASLYVGELDPSVTEAMLFELFNNIGAVASIR 101
Query: 330 IVVDKDTKRSKGIAYVLYAIPE-----SASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQ 384
+ D T+RS G AYV + + RA++ L+ ++ +G+ +M ++ S K
Sbjct: 102 VCRDAVTRRSLGYAYVNFHNSSDVNLLTGERALDELNYTLIKGKPCRIMWSQRDPSLRK- 160
Query: 385 ELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD 444
T G +K +AS + KA + F T +I +S +D
Sbjct: 161 -----TGTGNVFIKNL--------DASIDNKALHDTF----TAFGSI-----LSCKVAVD 198
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPY 504
N +T AE G +VS + S K D +K VKN+
Sbjct: 199 ELGNSKGYGFVHYKTSESAEAAIKHVYVGHHVSKKDRQS--KFDDMKLKFTNVYVKNIDP 256
Query: 505 DSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVP 559
+ SE E ++F KFG++ + L ++ V + +AA A + L YK
Sbjct: 257 EISEAEFEELFKKFGNVTSLSLSVDENGKSRGFGFVNYENHEDAARAVEELHDTEYKDRK 316
Query: 560 LYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLF 619
LY+ A QK +H+ + L +Q + D ++ +LF
Sbjct: 317 LYVCRA--------------QK------KHEREEELRKQYEQAKLD---KLNKYNGINLF 353
Query: 620 VKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVC 679
VKNL+ DE LR+ F + G I S K+ NGK S GFGF+ F S + AT
Sbjct: 354 VKNLDDDIDDERLRQEFSIY---GTITSAKIMVD-DNGK--SKGFGFVCFSSPDEATKAI 407
Query: 680 RDLQGTILDGHALILQLCHAK 700
++ ++ G L + L K
Sbjct: 408 TEMNQRMVSGKPLYVALAQRK 428
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ++RLR FS G IT AK+M +GKS+ F F+ F + EA +AI N
Sbjct: 352 LFVKNLDDDIDDERLRQEFSIYGTITSAKIMVDDNGKSKGFGFVCFSSPDEATKAITEMN 411
Query: 63 KSYLDTCRISCEIARK 78
+ + + +A++
Sbjct: 412 QRMVSGKPLYVALAQR 427
>gi|406946237|gb|EKD77506.1| glycine-rich RNA-binding protein [uncultured bacterium]
Length = 113
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+ +++V NL Y TEDELR++FS+FGN+ ++ +++D +T RSKG ++ YA +
Sbjct: 1 MSQSKIYVGNLSYNTTEDELRDYFSQFGNIEDIKLIIDFNTGRSKGFGFITYASIQDCES 60
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
A+ + GR L V AR
Sbjct: 61 AVTTANGVDMGGRKLKVNIAR 81
Score = 50.4 bits (119), Expect = 0.003, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIK 59
S+I V NL TED LRD+FSQ G I D KL + G+S+ F FI + + Q+ E A+
Sbjct: 4 SKIYVGNLSYNTTEDELRDYFSQFGNIEDIKLIIDFNTGRSKGFGFITYASIQDCESAVT 63
Query: 60 YFNKSYLDTCRISCEIAR 77
N + ++ IAR
Sbjct: 64 TANGVDMGGRKLKVNIAR 81
>gi|207340498|gb|EDZ68830.1| YPL043Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 474
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 15/111 (13%)
Query: 279 VDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKR 338
VD + + SK Q E +FVRN+PY ATE+ L HFSKFG+V V+DK T
Sbjct: 270 VDQASKNKESKRKAQNKREDFSVFVRNVPYDATEESLAAHFSKFGSVKYALPVIDKSTGL 329
Query: 339 SKGIAYVLYA-----------IPESASRAI----EVLDNSIFQGRLLHVMP 374
+KG A+V + P + S ++ +V+ +++GR+L + P
Sbjct: 330 AKGTAFVAFKDQYTYNECIKNAPAAGSTSLLIGDDVMPEYVYEGRVLSITP 380
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDT-KRSKGI 342
PSS+ + L+ LFVR++P T+++L + FS F + H VV KDT KRS+G
Sbjct: 11 PSSNVSKQNDDGLDMKTLFVRSIPQDVTDEQLADFFSNFAPIK--HAVVVKDTNKRSRGF 68
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK 383
+V +A+ + A+ + F G +L V A+ + S K
Sbjct: 69 GFVSFAVEDDTKEALAKARKTKFNGHILRVDIAKRRDRSKK 109
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 45/76 (59%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ V+++P+ VT+++L DFFS I A +++ + +SR F F+ F E + +EA+
Sbjct: 28 LFVRSIPQDVTDEQLADFFSNFAPIKHAVVVKDTNKRSRGFGFVSFAVEDDTKEALAKAR 87
Query: 63 KSYLDTCRISCEIARK 78
K+ + + +IA++
Sbjct: 88 KTKFNGHILRVDIAKR 103
>gi|170043941|ref|XP_001849624.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167867222|gb|EDS30605.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 143
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
P N ++ VQQ+ +LFV LPY T+ LREHFS +G++ E ++ D+ T +S+
Sbjct: 17 PSNGGGATTGVQQKDTTWTKLFVGGLPYHTTDKSLREHFSVYGDIEEAVVITDRTTNKSR 76
Query: 341 GIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
G +V+ SA RA + N I GR +V
Sbjct: 77 GYGFVIMGDRMSAERACKE-PNPIIDGRKANV 107
>gi|432942753|ref|XP_004083057.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Oryzias latipes]
Length = 221
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 48/70 (68%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++ T ++L + F+K+G V +V IV DKDT++SKG+A+VL+ ESA +
Sbjct: 12 VYVSNLPFSLTNNDLHKLFTKYGKVVKVTIVKDKDTRQSKGVAFVLFLDRESAHNCARAI 71
Query: 361 DNSIFQGRLL 370
+N GR++
Sbjct: 72 NNKQLFGRMI 81
>gi|189218303|ref|YP_001938945.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
gi|189185161|gb|ACD82346.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
Length = 143
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 8/92 (8%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL+V NLP+ +E++LRE F ++G V+E++++VDK T +S+G A+V ++A AI
Sbjct: 48 RLYVGNLPFRISENDLREIFEQYGQVNEINLIVDKMTGQSRGFAFVTMESSQAAQSAINN 107
Query: 360 LDNSIFQGRLLHV--------MPARHKKSSDK 383
L+ S GR + V P RH+++S +
Sbjct: 108 LNGSSVSGRQIVVNEAKPREERPHRHRENSGR 139
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIK 59
+R+ V NLP ++E+ LR+ F Q G++ + L+ K G+SR FAF+ + Q A+ AI
Sbjct: 47 TRLYVGNLPFRISENDLREIFEQYGQVNEINLIVDKMTGQSRGFAFVTMESSQAAQSAIN 106
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPRP 87
N S + +I A+ P RP
Sbjct: 107 NLNGSSVSGRQIVVNEAK----PREERP 130
>gi|259486065|tpe|CBF83611.1| TPA: glycine-rich RNA-binding protein, putative (AFU_orthologue;
AFUA_3G08580) [Aspergillus nidulans FGSC A4]
Length = 128
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
+LF+ L + T+D LRE FS++G + E +V D+DT RS+G +V +A A A+
Sbjct: 2 AKLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMG 61
Query: 359 VLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQG 393
++N F GR++ V K+S++ N QG
Sbjct: 62 AMNNQEFDGRIIRV-----DKASERPAARNGGFQG 91
Score = 43.1 bits (100), Expect = 0.59, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
+++ + L + T+D LR+ FS+ G I +A +++ +D +SR F F+ F +E EA+ A+
Sbjct: 2 AKLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMG 61
Query: 60 YFNKSYLD 67
N D
Sbjct: 62 AMNNQEFD 69
>gi|169763928|ref|XP_001727864.1| polyadenylate-binding protein 2 [Aspergillus oryzae RIB40]
gi|83770892|dbj|BAE61025.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871171|gb|EIT80336.1| splicing factor RNPS1, SR protein superfamily [Aspergillus oryzae
3.042]
Length = 187
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK + + KG AYV +A P
Sbjct: 61 KEEIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSL 120
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V+P R
Sbjct: 121 VAQAL-VLNESVFRGRNLKVVPKR 143
>gi|328715672|ref|XP_001946271.2| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 964
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 36/232 (15%)
Query: 499 VKNLPYDSSEGELAKMFGKFGSLD--KVILP---STKTLALVVFLEPVEAAAAFKGLAYK 553
+KN+ + +E EL +MF K+G++ KV+ S++ V F +P EA A L K
Sbjct: 501 IKNIDENVNEKELFEMFKKYGTITSCKVMFKDDGSSRGFGFVAFEDPKEAEKAVTELHGK 560
Query: 554 RY-KGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDR 612
+ +G Y+ A Q T + + + KR + ++E + +R
Sbjct: 561 KSPEGKTYYVNRA------QKKTER----------QQELKRKFEQYKIERI-------NR 597
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ +L+VKNL+ DE LR+ F G I S KV + +G+ S GFGF+ F S
Sbjct: 598 YQGVNLYVKNLDDTIDDERLRREFSAF---GTIKSAKV--MMDDGR--SKGFGFVYFSSP 650
Query: 673 ETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVA 724
E AT D+ G I+ L + L KKD + ++ + +T + ++++
Sbjct: 651 EEATKAVTDMNGRIVGTKPLYVTLAQRKKDRKAHLDSQYSQRNTNMRMQSIG 702
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V+NL T ++ LR FS FG + +++D RSKG +V ++ PE A++A+ +
Sbjct: 603 LYVKNLDDTIDDERLRREFSAFGTIKSAKVMMDDG--RSKGFGFVYFSSPEEATKAVTDM 660
Query: 361 DNSIFQGRLLHVMPARHKK 379
+ I + L+V A+ KK
Sbjct: 661 NGRIVGTKPLYVTLAQRKK 679
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ + +KN+ + V E L + F + G IT K+M DG SR F F+ F +EAE+A+
Sbjct: 497 TNVYIKNIDENVNEKELFEMFKKYGTITSCKVMFKDDGSSRGFGFVAFEDPKEAEKAV 554
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ++RLR FS G I AK+M DG+S+ F F+ F + +EA +A+ N
Sbjct: 603 LYVKNLDDTIDDERLRREFSAFGTIKSAKVM-MDDGRSKGFGFVYFSSPEEATKAVTDMN 661
Query: 63 KSYLDTCRISCEIARKVGD 81
+ T + +A++ D
Sbjct: 662 GRIVGTKPLYVTLAQRKKD 680
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 289 KDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYA 348
K++ Q+ ++++N+ E EL E F K+G ++ ++ KD S+G +V +
Sbjct: 487 KELGQQAKLYTNVYIKNIDENVNEKELFEMFKKYGTITSCKVMF-KDDGSSRGFGFVAFE 545
Query: 349 IPESASRAI-EVLDNSIFQGRLLHVMPARHKKSSDKQEL 386
P+ A +A+ E+ +G+ +V A+ KK+ +QEL
Sbjct: 546 DPKEAEKAVTELHGKKSPEGKTYYVNRAQ-KKTERQQEL 583
>gi|169622264|ref|XP_001804541.1| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
gi|187608896|sp|Q0U1G2.3|PABP_PHANO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|160704734|gb|EAT78222.2| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
Length = 744
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 111/510 (21%), Positives = 190/510 (37%), Gaps = 144/510 (28%)
Query: 273 DANGEIVDPGNPSSS------SKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVS 326
DANG ++ P++S + QQ S L+V L + TE L E FS G V+
Sbjct: 16 DANGAQINTNVPAASGDAPTPTTAAQQAHQNSASLYVGELDPSVTEAMLFELFSSIGQVA 75
Query: 327 EVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHKKSS 381
+ + D T+RS G AYV Y E +A+E L+ ++ +G+ +M PA K
Sbjct: 76 SIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQ 135
Query: 382 ------------DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVE 429
D + LH++ + L + A + GN+K + F+ +T
Sbjct: 136 GNVFIKNLDHAIDNKALHDTFAAFGNILSCKV-----AQDELGNSKGYG--FVHYETA-- 186
Query: 430 NIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGV----NVSSLEEFSAG 485
EA + A++ G ++ KK + +S EE A
Sbjct: 187 ----------------EAANNAIKHVNG---MLLNEKKVFVGHHIPKKERMSKFEEMKAN 227
Query: 486 KTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEP 540
T+ VKN+ D ++ + ++F K G + + ++ V ++
Sbjct: 228 FTN--------IYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIRH 279
Query: 541 VEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQL 600
AA A L +KG LY+ A K +++ + + +++A R + +
Sbjct: 280 EAAAVAVDHLNDIEFKGQKLYVGRA----------QKKHEREEELRKQYEAARLEKQSKY 329
Query: 601 EGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHF------------------------ 636
+GV +L++KNLN DE LR F
Sbjct: 330 QGV-------------NLYIKNLNDDVDDEKLRDMFTPFGTITSAKVILRDEEKKDEEEK 376
Query: 637 --------------------------GEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFD 670
GE K G +++K +K + GK S GFGF+ F
Sbjct: 377 EVKEEKKEDEKKEDEEAKEGSSSEQNGEDTKAGDKVTIKGEKKIL-GK--SKGFGFVCFS 433
Query: 671 SVETATNVCRDLQGTILDGHALILQLCHAK 700
+ + AT ++ +++G L + L K
Sbjct: 434 NPDEATKAVTEMNQKMIEGKPLYVALAQRK 463
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I VKN+ VT++ R+ F + G+IT A + R GKSR F F+ + + A A+ +
Sbjct: 229 TNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAVDH 288
Query: 61 FN 62
N
Sbjct: 289 LN 290
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK-HLKNGKNVSMGFGFIEFDSVETA 675
++F+KNL+ ++ L F G ILS KV + L N K G+GF+ +++ E A
Sbjct: 137 NVFIKNLDHAIDNKALHDTFAAF---GNILSCKVAQDELGNSK----GYGFVHYETAEAA 189
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
N + + G +L+ + + H K E++ K E + T + V+N+
Sbjct: 190 NNAIKHVNGMLLNEKKVFVG-HHIPKKERMSKFEEMKANFTNIYVKNI 236
>gi|242767348|ref|XP_002341352.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
gi|218724548|gb|EED23965.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
Length = 188
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T KG AYV +A P
Sbjct: 61 KEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFAEPSL 120
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V P R
Sbjct: 121 VAQAL-VLNESVFRGRNLKVTPKR 143
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G+LFV L + TE+ L E F+K+GN+++V ++ DK+T RS+G +V Y E A A+E
Sbjct: 5 GKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALE 64
Query: 359 VLDNSIFQGRLLHVMPA 375
++ GR + V A
Sbjct: 65 GMNGKSVDGRTIRVDEA 81
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
LFV L+F T +E+L + F K G I V V + + G+ S GFGF+++D+ E A +
Sbjct: 7 LFVGGLSFDTTEESLAEAF---AKYGNIAKVDVIRDKETGR--SRGFGFVKYDNAEDAKD 61
Query: 678 VCRDLQGTILDGHAL 692
+ G +DG +
Sbjct: 62 ALEGMNGKSVDGRTI 76
>gi|108563238|ref|YP_627554.1| RNA binding protein [Helicobacter pylori HPAG1]
gi|207092180|ref|ZP_03239967.1| RNA binding protein [Helicobacter pylori HPKX_438_AG0C1]
gi|207108722|ref|ZP_03242884.1| RNA binding protein [Helicobacter pylori HPKX_438_CA4C1]
gi|208434741|ref|YP_002266407.1| RNA binding protein [Helicobacter pylori G27]
gi|217034126|ref|ZP_03439546.1| hypothetical protein HP9810_868g19 [Helicobacter pylori 98-10]
gi|254779200|ref|YP_003057305.1| Nucleotide binding protein [Helicobacter pylori B38]
gi|308184614|ref|YP_003928747.1| Nucleotide binding protein [Helicobacter pylori SJM180]
gi|383749509|ref|YP_005424612.1| Nucleotide binding protein [Helicobacter pylori ELS37]
gi|384887524|ref|YP_005762035.1| RNA binding protein [Helicobacter pylori 52]
gi|384895891|ref|YP_005769880.1| peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 35A]
gi|384898869|ref|YP_005774248.1| RNA binding protein [Helicobacter pylori F30]
gi|385217292|ref|YP_005778768.1| RNA binding protein [Helicobacter pylori F16]
gi|385220355|ref|YP_005781827.1| Nucleotide binding protein [Helicobacter pylori India7]
gi|385222267|ref|YP_005771400.1| Nucleotide binding protein [Helicobacter pylori SouthAfrica7]
gi|385225221|ref|YP_005785146.1| peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 83]
gi|385227064|ref|YP_005786988.1| Nucleotide binding protein [Helicobacter pylori SNT49]
gi|419417835|ref|ZP_13958228.1| Nucleotide binding protein [Helicobacter pylori NCTC 11637 = CCUG
17874]
gi|420395503|ref|ZP_14894730.1| RNA binding protein [Helicobacter pylori CPY1124]
gi|420399055|ref|ZP_14898266.1| RNA binding protein [Helicobacter pylori CPY1962]
gi|420400434|ref|ZP_14899635.1| RNA binding protein [Helicobacter pylori CPY3281]
gi|420401957|ref|ZP_14901148.1| RNA binding protein [Helicobacter pylori CPY6081]
gi|420404863|ref|ZP_14904043.1| RNA binding protein [Helicobacter pylori CPY6271]
gi|420407014|ref|ZP_14906184.1| RNA binding protein [Helicobacter pylori CPY6311]
gi|420412407|ref|ZP_14911536.1| RNA binding protein [Helicobacter pylori NQ4228]
gi|420413838|ref|ZP_14912960.1| RNA binding protein [Helicobacter pylori NQ4099]
gi|420415205|ref|ZP_14914320.1| RNA binding protein [Helicobacter pylori NQ4053]
gi|420417163|ref|ZP_14916268.1| RNA binding protein [Helicobacter pylori NQ4044]
gi|420418773|ref|ZP_14917865.1| RNA binding protein [Helicobacter pylori NQ4076]
gi|420420101|ref|ZP_14919188.1| RNA binding protein [Helicobacter pylori NQ4161]
gi|420422177|ref|ZP_14921255.1| RNA binding protein [Helicobacter pylori NQ4110]
gi|420426823|ref|ZP_14925872.1| RNA binding protein [Helicobacter pylori Hp A-9]
gi|420430627|ref|ZP_14929655.1| RNA binding protein [Helicobacter pylori Hp A-20]
gi|420436121|ref|ZP_14935117.1| RNA binding protein [Helicobacter pylori Hp H-27]
gi|420437247|ref|ZP_14936231.1| RNA binding protein [Helicobacter pylori Hp H-28]
gi|420447180|ref|ZP_14946074.1| RNA binding protein [Helicobacter pylori Hp H-43]
gi|420460332|ref|ZP_14959131.1| RNA binding protein [Helicobacter pylori Hp A-27]
gi|420470696|ref|ZP_14969405.1| RNA binding protein [Helicobacter pylori Hp H-11]
gi|420492854|ref|ZP_14991428.1| RNA binding protein [Helicobacter pylori Hp P-15]
gi|420494347|ref|ZP_14992916.1| RNA binding protein [Helicobacter pylori Hp P-16]
gi|420496128|ref|ZP_14994692.1| RNA binding protein [Helicobacter pylori Hp P-23]
gi|420501620|ref|ZP_15000164.1| RNA binding protein [Helicobacter pylori Hp P-30]
gi|420506658|ref|ZP_15005173.1| RNA binding protein [Helicobacter pylori Hp P-74]
gi|420526874|ref|ZP_15025275.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-15b]
gi|421710341|ref|ZP_16149698.1| RNA recognition motif family protein [Helicobacter pylori R018c]
gi|421713144|ref|ZP_16152475.1| RNA recognition motif family protein [Helicobacter pylori R32b]
gi|421715106|ref|ZP_16154424.1| RNA recognition motif family protein [Helicobacter pylori R036d]
gi|421716926|ref|ZP_16156234.1| RNA recognition motif family protein [Helicobacter pylori R037c]
gi|421718446|ref|ZP_16157745.1| RNA recognition motif family protein [Helicobacter pylori R038b]
gi|421719578|ref|ZP_16158862.1| RNA recognition motif family protein [Helicobacter pylori R046Wa]
gi|421723617|ref|ZP_16162871.1| RNA recognition motif family protein [Helicobacter pylori R056a]
gi|444373958|ref|ZP_21173265.1| Nucleotide binding protein [Helicobacter pylori A45]
gi|107837011|gb|ABF84880.1| RNA binding protein [Helicobacter pylori HPAG1]
gi|208432670|gb|ACI27541.1| RNA binding protein [Helicobacter pylori G27]
gi|216943410|gb|EEC22866.1| hypothetical protein HP9810_868g19 [Helicobacter pylori 98-10]
gi|254001111|emb|CAX29066.1| Nucleotide binding protein [Helicobacter pylori B38]
gi|261839354|gb|ACX99119.1| RNA binding protein [Helicobacter pylori 52]
gi|308060534|gb|ADO02430.1| Nucleotide binding protein [Helicobacter pylori SJM180]
gi|315586507|gb|ADU40888.1| peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 35A]
gi|317009162|gb|ADU79742.1| Nucleotide binding protein [Helicobacter pylori India7]
gi|317011046|gb|ADU84793.1| Nucleotide binding protein [Helicobacter pylori SouthAfrica7]
gi|317177341|dbj|BAJ55130.1| RNA binding protein [Helicobacter pylori F16]
gi|317178812|dbj|BAJ56600.1| RNA binding protein [Helicobacter pylori F30]
gi|332673367|gb|AEE70184.1| peptidyl-prolyl cis-trans isomerase [Helicobacter pylori 83]
gi|344331977|gb|AEN17007.1| Nucleotide binding protein [Helicobacter pylori SNT49]
gi|380874255|gb|AFF20036.1| Nucleotide binding protein [Helicobacter pylori ELS37]
gi|384375356|gb|EIE30653.1| Nucleotide binding protein [Helicobacter pylori NCTC 11637 = CCUG
17874]
gi|393013284|gb|EJB14461.1| RNA binding protein [Helicobacter pylori CPY1962]
gi|393013939|gb|EJB15113.1| RNA binding protein [Helicobacter pylori CPY1124]
gi|393017379|gb|EJB18532.1| RNA binding protein [Helicobacter pylori CPY3281]
gi|393017776|gb|EJB18928.1| RNA binding protein [Helicobacter pylori CPY6081]
gi|393023851|gb|EJB24965.1| RNA binding protein [Helicobacter pylori CPY6311]
gi|393024733|gb|EJB25843.1| RNA binding protein [Helicobacter pylori CPY6271]
gi|393027399|gb|EJB28488.1| RNA binding protein [Helicobacter pylori NQ4099]
gi|393028065|gb|EJB29153.1| RNA binding protein [Helicobacter pylori NQ4228]
gi|393032673|gb|EJB33738.1| RNA binding protein [Helicobacter pylori NQ4053]
gi|393033599|gb|EJB34662.1| RNA binding protein [Helicobacter pylori NQ4076]
gi|393034994|gb|EJB36044.1| RNA binding protein [Helicobacter pylori NQ4044]
gi|393037337|gb|EJB38373.1| RNA binding protein [Helicobacter pylori NQ4161]
gi|393038695|gb|EJB39729.1| RNA binding protein [Helicobacter pylori NQ4110]
gi|393043780|gb|EJB44783.1| RNA binding protein [Helicobacter pylori Hp A-9]
gi|393047324|gb|EJB48299.1| RNA binding protein [Helicobacter pylori Hp A-20]
gi|393050006|gb|EJB50967.1| RNA binding protein [Helicobacter pylori Hp H-27]
gi|393053561|gb|EJB54505.1| RNA binding protein [Helicobacter pylori Hp H-28]
gi|393064153|gb|EJB64993.1| RNA binding protein [Helicobacter pylori Hp H-43]
gi|393077434|gb|EJB78183.1| RNA binding protein [Helicobacter pylori Hp A-27]
gi|393086129|gb|EJB86808.1| RNA binding protein [Helicobacter pylori Hp H-11]
gi|393107293|gb|EJC07836.1| RNA binding protein [Helicobacter pylori Hp P-15]
gi|393111148|gb|EJC11672.1| RNA binding protein [Helicobacter pylori Hp P-16]
gi|393112439|gb|EJC12960.1| RNA binding protein [Helicobacter pylori Hp P-23]
gi|393116163|gb|EJC16673.1| RNA binding protein [Helicobacter pylori Hp P-74]
gi|393132179|gb|EJC32602.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-15b]
gi|393150426|gb|EJC50734.1| RNA binding protein [Helicobacter pylori Hp P-30]
gi|407210532|gb|EKE80411.1| RNA recognition motif family protein [Helicobacter pylori R018c]
gi|407215960|gb|EKE85798.1| RNA recognition motif family protein [Helicobacter pylori R036d]
gi|407216510|gb|EKE86347.1| RNA recognition motif family protein [Helicobacter pylori R32b]
gi|407219501|gb|EKE89316.1| RNA recognition motif family protein [Helicobacter pylori R037c]
gi|407220901|gb|EKE90706.1| RNA recognition motif family protein [Helicobacter pylori R046Wa]
gi|407221712|gb|EKE91516.1| RNA recognition motif family protein [Helicobacter pylori R038b]
gi|407224640|gb|EKE94416.1| RNA recognition motif family protein [Helicobacter pylori R056a]
gi|443621182|gb|ELT81621.1| Nucleotide binding protein [Helicobacter pylori A45]
Length = 82
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+AT ++++E FS+FG V V ++ D++TK+ KG +V E S AI L
Sbjct: 4 IYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQ-EEGVSEAIAKL 62
Query: 361 DNSIFQGRLLHVMPARHKKS 380
DN+ F GR + V A KKS
Sbjct: 63 DNTDFMGRTIRVTEANPKKS 82
>gi|209154454|gb|ACI33459.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 206
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ G+LFV L + E L E FSK+GN+++V +V D++T+RS+G +V + PE A A
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDA 62
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR++ V
Sbjct: 63 MAAMNGKSVDGRMIRV 78
>gi|384915859|ref|ZP_10016064.1| RNA-binding protein, RRM domain (modular protein)
[Methylacidiphilum fumariolicum SolV]
gi|384526721|emb|CCG91935.1| RNA-binding protein, RRM domain (modular protein)
[Methylacidiphilum fumariolicum SolV]
Length = 255
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E++ S +L+V NLPY T+ +L E F+K G + V I+ D+ T R+KG +V A +S
Sbjct: 163 EELVTSNKLYVGNLPYNLTDSDLFEIFAKVGPIKNVEIIRDRRTNRTKGFGFVEMADLDS 222
Query: 353 ASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQE 385
A +A+ +L+ GR + V A+ +K QE
Sbjct: 223 ARKAVTILNRIEVMGRRIIVTGAKSEKKDSTQE 255
>gi|367040559|ref|XP_003650660.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
gi|346997921|gb|AEO64324.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
Length = 777
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 110/482 (22%), Positives = 182/482 (37%), Gaps = 130/482 (26%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
PSS++ Q S L+V L + TE L E FS+ G+V+ + + D T+RS G A
Sbjct: 53 PSSTAPHPQ----SSASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYA 108
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHKKSS------------DKQEL 386
YV Y + +A+E L+ ++ +GR +M PA K D + L
Sbjct: 109 YVNYNSTQDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKAL 168
Query: 387 HNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPD-TVVENIARKHGVSKSDLLDR 445
H++ + L + A + +GN+K + + D + I +G+ LL+
Sbjct: 169 HDTFAAFGNILSCK-----VAQDENGNSKGYGFVHYETDEAAAQAIKHVNGM----LLNE 219
Query: 446 EANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYD 505
+ + I + Q S EE A T+ VKN+ ++
Sbjct: 220 KKVYVGYHIPKKDRQ----------------SKFEEMKANFTN--------VYVKNINHE 255
Query: 506 SSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPL 560
+E E ++F K+G + L ++ V F AA A + L K ++G L
Sbjct: 256 VTEEEFRELFAKYGEVTSSSLARDNEGKSRGFGFVNFTTHASAAKAVEELNGKEFRGQEL 315
Query: 561 YLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFV 620
Y+ A K +++ + + ++A R + +GV +L++
Sbjct: 316 YVGRA----------QKKHEREEELRKSYEAARLEKANKYQGV-------------NLYI 352
Query: 621 KNLNFKTCDENLRKHFGEHIKEGRILSVKV------------------------------ 650
KNL D+ LR+ F E G I S KV
Sbjct: 353 KNLADDVDDDKLRQMFSEF---GPITSAKVMRDAPPEPPAGSEGDKEGKDKENKKESEKE 409
Query: 651 ------------KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCH 698
K K GK S GFGF+ F + + AT ++ ++DG L + L
Sbjct: 410 GEGEAAEKKTEKKVERKLGK--SKGFGFVCFSNPDDATKAVAEMNQRMVDGKPLYVALAQ 467
Query: 699 AK 700
K
Sbjct: 468 RK 469
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN+ VTE+ R+ F++ GE+T + L R +GKSR F F+ F T A +A++
Sbjct: 245 TNVYVKNINHEVTEEEFRELFAKYGEVTSSSLARDNEGKSRGFGFVNFTTHASAAKAVEE 304
Query: 61 FN 62
N
Sbjct: 305 LN 306
>gi|387782183|ref|YP_005792896.1| RNA binding protein [Helicobacter pylori 51]
gi|261837942|gb|ACX97708.1| RNA binding protein [Helicobacter pylori 51]
Length = 82
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+AT ++++E FS+FG V V ++ D++TK+ KG +V E S AI L
Sbjct: 4 IYVGNLVYSATSEQVKELFSQFGKVLNVKLIYDRETKKPKGFGFVEMQ-EEGVSEAIAKL 62
Query: 361 DNSIFQGRLLHVMPARHKKS 380
DN+ F GR + V A KKS
Sbjct: 63 DNTDFMGRTIRVTEANPKKS 82
>gi|209737234|gb|ACI69486.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 146
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G+LFV L + E L E FSK+GN+++V +V D++T+RS+G +V + PE A A+
Sbjct: 5 GKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMA 64
Query: 359 VLDNSIFQGRLLHV 372
++ GR++ V
Sbjct: 65 AMNGKSVDGRMIRV 78
>gi|302657509|ref|XP_003020475.1| hypothetical protein TRV_05442 [Trichophyton verrucosum HKI 0517]
gi|291184312|gb|EFE39857.1| hypothetical protein TRV_05442 [Trichophyton verrucosum HKI 0517]
Length = 793
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 160/377 (42%), Gaps = 67/377 (17%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIKYF 61
+ V++LP T + L ++FSQ + A + + + +S+ + F+ F ++A+ A +
Sbjct: 87 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAREL 146
Query: 62 NKSYLDTCRISCEIA----RKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKT 117
N S + +I E+A R++ D + + K KE+ E + L K +
Sbjct: 147 NNSVFEGKKIKIELAEPRHREI-DEKAGKSVPSSAPSKAKELKEKRRLESLPPKLIIRNL 205
Query: 118 IEKVTENDDPQLLEFL--------QVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAI 169
+TE PQ LE L + P+ S++ G + + K +E + +
Sbjct: 206 PWSITE---PQHLELLFRSYGKIKHAVVPKKGSRLAG----FGFVVMRGRKNAERAIEGV 258
Query: 170 KGGEKSITLHVKSDKSNVITDSQATEK----SKNAAADELMSDMDYFKSRVKKDWSDSE- 224
G E D + D A EK ++N AA+E S K++ DSE
Sbjct: 259 NGKE--------VDGRTLAVD-WAVEKDEWENRNKAAEE---------SDGKEEAGDSEE 300
Query: 225 ----SEDDSAGDDDDDDDGEEEEEEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEIVD 280
+E DD + D E+EE+ G + D S+
Sbjct: 301 AVAENEQLDVVDDGESDAISEDEED----GGVELDNEDEDEDISMDDAE----------- 345
Query: 281 PGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSK 340
++ +++ + +F+RNLP++AT++ L EHFSKFG V +V+D T+R K
Sbjct: 346 ----YDEQEEEEEDDRNASTIFIRNLPFSATDETLHEHFSKFGPVRYARVVLDPATERPK 401
Query: 341 GIAYVLYAIPESASRAI 357
G A+V + E AS I
Sbjct: 402 GTAFVCFYKAEDASSCI 418
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFVR+LP TAT + L E+FS+ + +V+D TK+SKG +V + E A A L
Sbjct: 87 LFVRSLPTTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAREL 146
Query: 361 DNSIFQGRLLHVMPA--RHKKSSDK--QELHNSTSQGTKTLKQRREEE 404
+NS+F+G+ + + A RH++ +K + + +S K LK++R E
Sbjct: 147 NNSVFEGKKIKIELAEPRHREIDEKAGKSVPSSAPSKAKELKEKRRLE 194
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 44/282 (15%)
Query: 276 GEIVDPGNPSSSSKDVQQEVLES--GRLFVRNLPYTATEDE-LREHFSKFGNVSEVHIVV 332
G+ V PS + + ++ LES +L +RNLP++ TE + L F +G + H VV
Sbjct: 173 GKSVPSSAPSKAKELKEKRRLESLPPKLIIRNLPWSITEPQHLELLFRSYGKIK--HAVV 230
Query: 333 DKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ 392
K R G +V+ ++A RAIE ++ GR L V A K D+ E N +
Sbjct: 231 PKKGSRLAGFGFVVMRGRKNAERAIEGVNGKEVDGRTLAVDWAVEK---DEWENRNKAA- 286
Query: 393 GTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAV 452
EE E +G+++ + V EN + D++D +D
Sbjct: 287 ----------EESDGKEEAGDSE---------EAVAEN-------EQLDVVDDGESDA-- 318
Query: 453 RIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELA 512
I+ E E + +++ E + + R+ ++NLP+ +++ L
Sbjct: 319 -ISEDEEDGGVELDNEDEDEDISMDDAEYDEQEEEEEDDRNASTIFIRNLPFSATDETLH 377
Query: 513 KMFGKFGSLD--KVIL-PST---KTLALVVFLEPVEAAAAFK 548
+ F KFG + +V+L P+T K A V F + +A++ +
Sbjct: 378 EHFSKFGPVRYARVVLDPATERPKGTAFVCFYKAEDASSCIR 419
>gi|332846661|ref|XP_003315290.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Pan
troglodytes]
Length = 266
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 271 EEDANGEIVDPGNPSSSSKDVQQEVLESGR--LFVRNLPYTATEDELREHFSKFGNVSEV 328
E A G+++ P +E +E+ ++V N+ Y + +EL HFS+ G V V
Sbjct: 117 EGTAAGQLLSPETTGCRLPGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRV 176
Query: 329 HIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
I+ DK + KG AY+ +A S A+E LD S+F+GR++ V+P R
Sbjct: 177 TILCDKFSGHPKGYAYIEFATKGSVQAAVE-LDQSLFRGRVIKVLPKR 223
>gi|259089109|ref|NP_001158591.1| cold inducible RNA binding protein [Oncorhynchus mykiss]
gi|225705082|gb|ACO08387.1| Cold-inducible RNA-binding protein [Oncorhynchus mykiss]
Length = 209
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G+LFV L + E L E FSK+GN+++V +V D++T+RS+G +V + PE A A+
Sbjct: 5 GKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETRRSRGFGFVTFENPEDAKDAMA 64
Query: 359 VLDNSIFQGRLLHV 372
++ GR++ V
Sbjct: 65 AMNGKSVDGRMIRV 78
>gi|241948533|ref|XP_002416989.1| ARS consensus binding protein, putative; poly(A)-binding protein,
putative; polyadenylate tail-binding protein, putative;
polyadenylate-binding protein, cytoplasmic and nuclear,
putative [Candida dubliniensis CD36]
gi|223640327|emb|CAX44577.1| ARS consensus binding protein, putative [Candida dubliniensis CD36]
Length = 627
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 179/450 (39%), Gaps = 86/450 (19%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L + E L E FS G VS + + D +K+S G AYV Y E +AI
Sbjct: 50 SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKYEDGEKAI 109
Query: 358 EVLDNSIFQGRLLHVMPARHKKSS-----------------DKQELHNSTSQGTKTLKQR 400
E L+ + +GR +M ++ S+ D + LH++ S K L
Sbjct: 110 EELNYTPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSC- 168
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
+ A++ G +K + F+ +T A V+ L DRE + +G+
Sbjct: 169 ----KVAADEFGQSKCFG--FVHYETAEAAEAAIENVNGMLLNDRE-------VFVGKH- 214
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
I++ + S EE A T+ VKN+ + SE K+F +G
Sbjct: 215 -ISKKDRE--------SKFEEMKANFTN--------IYVKNIDLNYSEESFEKLFAPYGK 257
Query: 521 LDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
+ + L +K V F A A + L K G +Y
Sbjct: 258 ITSIYLEKDQDGKSKGFGFVNFENHDSAVKAVEELNDKEINGQKIY-------------- 303
Query: 576 SKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDP-DRVESRSLFVKNLNFKTCDENLRK 634
VG KR LE+ + A ++ + + +LFVKNL+ E L +
Sbjct: 304 ----------VGRAQKKRERLEELKKQYEAARLEKLAKYQGVNLFVKNLDDAIDSEKLEE 353
Query: 635 HFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALIL 694
F G I S KV + + S GFGF+ F + E AT ++ +++G L +
Sbjct: 354 EFKSF---GTITSAKV---MVDDAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPLYV 407
Query: 695 QLCHAKKDEQVVKKAEKDKSSTKLLVRNVA 724
L +KD + + ++ ++ ++ ++N A
Sbjct: 408 ALAQ-RKDVRRSQLEQQIQARNQMRMQNAA 436
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ++L + F G IT AK+M GKS+ F F+ F T +EA +AI N
Sbjct: 337 LFVKNLDDAIDSEKLEEEFKSFGTITSAKVMVDDAGKSKGFGFVCFTTPEEATKAITEMN 396
Query: 63 KSYLDTCRISCEIARK 78
++ + +A++
Sbjct: 397 TRMINGKPLYVALAQR 412
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ I VKN+ +E+ F+ G+IT L + +DGKS+ F F+ F A +A++
Sbjct: 232 TNIYVKNIDLNYSEESFEKLFAPYGKITSIYLEKDQDGKSKGFGFVNFENHDSAVKAVEE 291
Query: 61 FNKSYLDTCRISCEIARK 78
N ++ +I A+K
Sbjct: 292 LNDKEINGQKIYVGRAQK 309
>gi|156064711|ref|XP_001598277.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980]
gi|154691225|gb|EDN90963.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 784
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 111/489 (22%), Positives = 182/489 (37%), Gaps = 123/489 (25%)
Query: 273 DANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVV 332
+ N E D P+ ++ Q S L+V L + TE L E FS+ G+V+ + +
Sbjct: 38 NVNSEDQDAAGPTPTNAPHPQA---SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCR 94
Query: 333 DKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHKKSS------ 381
D T+RS G AYV Y +A+E L+ ++ +GR +M PA K
Sbjct: 95 DAITRRSLGYAYVNYNTTVDGEKALEELNYTLIKGRPCRIMWSQRDPALRKNGQGNVFIK 154
Query: 382 ------DKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPD-TVVENIARK 434
D + LH++ + L + A + SG +K + + D + I
Sbjct: 155 NLDVAIDNKALHDTFAAFGNILSCK-----VAQDESGASKGYGFVHYETDEAAAQAIKHV 209
Query: 435 HGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSN 494
+G+ LL+ + + I + Q S EE A T+
Sbjct: 210 NGM----LLNEKKVFVGHHIPKKDRQ----------------SKFEEMKANFTN------ 243
Query: 495 HVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP------STKTLALVVFLEPVEAAAAFK 548
VKN+P +++E E ++F KFG + L ++ V F+ AA A
Sbjct: 244 --IYVKNIPVEATEEEFRELFEKFGDVTSASLARDTESGKSRGFGFVNFINHEHAATAVD 301
Query: 549 GLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADI 608
L K +KG LY+ A K +++ + + ++A R + +GV
Sbjct: 302 ELNGKDFKGQDLYVGRA----------QKKHEREEELRRSYEAARMEKASKYQGV----- 346
Query: 609 DPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK---------------- 652
+L+VKNL+ + DE LR+ F G I S KV +
Sbjct: 347 --------NLYVKNLDDEIDDEKLRELFAPF---GAITSAKVMRDTPAETADAEDKKEKD 395
Query: 653 ---------------------HLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHA 691
K S GFGF+ F++ + AT D+ ++
Sbjct: 396 EEKNKENKKEGEAETEEASAPKAKRPLGKSKGFGFVCFNNPDEATKAVSDMNQRMVSNKP 455
Query: 692 LILQLCHAK 700
L + L K
Sbjct: 456 LYVALAQRK 464
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR-TKDGKSRQFAFIGFRTEQEAEEAIK 59
+ I VKN+P TE+ R+ F + G++T A L R T+ GKSR F F+ F + A A+
Sbjct: 242 TNIYVKNIPVEATEEEFRELFEKFGDVTSASLARDTESGKSRGFGFVNFINHEHAATAVD 301
Query: 60 YFN 62
N
Sbjct: 302 ELN 304
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
++F+KNL+ ++ L F G ILS KV + + S G+GF+ +++ E A
Sbjct: 150 NVFIKNLDVAIDNKALHDTFAAF---GNILSCKVAQ---DESGASKGYGFVHYETDEAAA 203
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
+ + G +L+ + + KKD Q K E + T + V+N+ EA
Sbjct: 204 QAIKHVNGMLLNEKKVFVGHHIPKKDRQ-SKFEEMKANFTNIYVKNIPVEA 253
>gi|148684930|gb|EDL16877.1| mCG114434 [Mus musculus]
Length = 153
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSQGFDFITFTNPEHASDA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESLDGRQIRV 79
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
LFV LNF T ++ L HF ++ VK ++ + S GF FI F + E A++
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQR-----SQGFDFITFTNPEHASD 62
Query: 678 VCRDLQGTILDGHALILQLCHAKK 701
R + G LDG +++ HA K
Sbjct: 63 AMRAMNGESLDGRQ--IRVDHAGK 84
>gi|361128049|gb|EHL00002.1| putative Polyadenylate-binding protein, cytoplasmic and nuclear
[Glarea lozoyensis 74030]
Length = 783
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 176/481 (36%), Gaps = 126/481 (26%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
PSS+ Q S L+V L + TE L E FS+ G+V+ + + D T+RS G A
Sbjct: 51 PSSAVPHPQ----ASASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYA 106
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHKKSS------------DKQEL 386
YV Y +A+E L+ ++ +GR +M PA K D + L
Sbjct: 107 YVNYNTTTDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKAL 166
Query: 387 HNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE 446
H++ + L + A + SG +K + + D A KH LL+ +
Sbjct: 167 HDTFAAFGNILSCK-----VAQDESGASKGYGFVHYETDEAASQ-AIKH--VNGMLLNEK 218
Query: 447 ANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDS 506
+ I + Q S EE A T+ VKN+P ++
Sbjct: 219 KVFVGHHIPKKDRQ----------------SKFEEMKANFTN--------IYVKNIPVEA 254
Query: 507 SEGELAKMFGKFGSLDKVILP------STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPL 560
++ E ++F KFG + L ++ V F+ AA A L K +KG L
Sbjct: 255 TDEEFRELFEKFGDVTSASLARDQDTGKSRGFGFVNFINHEHAATAVDELNGKDFKGQDL 314
Query: 561 YLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFV 620
Y+ A K +++ + + ++A R + +GV +L+V
Sbjct: 315 YVGRA----------QKKHEREEELRKSYEAARIEKASKYQGV-------------NLYV 351
Query: 621 KNLNFKTCDENLRKHFGEHIKEGRILSVKV------------------------------ 650
KNL+ DE LR+ F G I S KV
Sbjct: 352 KNLDDDVDDEKLRELF---TPFGAITSAKVMRDSAAETAEAEKKEEEKNKENKKEGDAEE 408
Query: 651 -----------KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHA 699
K K S GFGF+ F + + AT D+ +++G L + L
Sbjct: 409 GEKADGEKKEAPKSEKRTVGKSKGFGFVCFSNPDEATKAIADMNQNMVNGKPLYVALAQR 468
Query: 700 K 700
K
Sbjct: 469 K 469
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
+ I VKN+P T++ R+ F + G++T A L R +D GKSR F F+ F + A A+
Sbjct: 243 TNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDQDTGKSRGFGFVNFINHEHAATAVD 302
Query: 60 YFN 62
N
Sbjct: 303 ELN 305
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
++F+KNL+ ++ L F G ILS KV + + S G+GF+ +++ E A+
Sbjct: 151 NVFIKNLDTAIDNKALHDTFAAF---GNILSCKVAQ---DESGASKGYGFVHYETDEAAS 204
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
+ + G +L+ + + KKD Q K E + T + V+N+ EA
Sbjct: 205 QAIKHVNGMLLNEKKVFVGHHIPKKDRQ-SKFEEMKANFTNIYVKNIPVEA 254
>gi|343427618|emb|CBQ71145.1| related to poly(a) binding protein II [Sporisorium reilianum SRZ2]
Length = 208
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++E ++S ++V N+ Y AT +E+++HF G ++ V I+ DK T KG AYV +A P
Sbjct: 91 EREEVDSRSIYVGNVDYGATPEEVQQHFQSCGTINRVTILCDKFTGHPKGFAYVEFADPS 150
Query: 352 SASRAIEVLDNSIFQGRLLHVMPAR 376
+ A+ VL+ S+F+GRL+ V R
Sbjct: 151 LVANAM-VLNESLFRGRLIKVTAKR 174
>gi|356528571|ref|XP_003532874.1| PREDICTED: uncharacterized protein LOC100817963 [Glycine max]
Length = 493
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
E ++S +FV N+ + AT+D L HF++FG V +V IV D T + KG AYV + E+A
Sbjct: 316 EDVDSRTIFVSNVHFAATKDGLSRHFNRFGEVLKVIIVTDAATGQPKGAAYVEFMRKEAA 375
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKKSSDKQE 385
A+ LDN+ F R+L V+ KKS+ QE
Sbjct: 376 DNALS-LDNTSFMSRILKVI----KKSATTQE 402
>gi|391332716|ref|XP_003740776.1| PREDICTED: polyadenylate-binding protein 1-like [Metaseiulus
occidentalis]
Length = 660
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 168/410 (40%), Gaps = 49/410 (11%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L TE L E F + G V + + D ++RS G AYV + P A RA++ +
Sbjct: 13 LYVGDLDPDVTESMLFEKFCQAGPVLSIRVCRDMISRRSLGYAYVNFHQPGDAERALDTM 72
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ + R + +M ++ S K + G +K ++ + + N L
Sbjct: 73 NFEPLKNRPMRIMWSQRDPSLRKSGV------GNVFIKNLHKDIDNKAIFDTFSAFGNIL 126
Query: 421 FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLE 480
R T + +R +G + EA + A+ G ++ KK V S E
Sbjct: 127 SCRVATDEQGNSRGYGFVHFE--TEEAANEAINKVNG---MLLNEKKVFVGKFVPRSERE 181
Query: 481 EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT-----LALV 535
D + +V+ VKN + +G+L +MF +G + + + +T V
Sbjct: 182 RMMG---DKARLFTNVY-VKNFGEELDDGKLKEMFEVYGKITSARVMTDQTGKSRGFGFV 237
Query: 536 VFLEPVEAAAAFKGLAYKRY-KGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRA 594
F P A A K L K G +Y+ + +K + + D KR
Sbjct: 238 SFENPDNAEQAVKELNDKELGNGKKIYV-------------GRAQKKAERL---SDLKRK 281
Query: 595 LLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL 654
+ ++E +T R + +L+VKNL+ DE LR+ F + G I S KV
Sbjct: 282 FEQLKMERMT-------RYQGVNLYVKNLDDVIDDERLRREFAPY---GTITSAKVMMDS 331
Query: 655 KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQ 704
+ S GFGF+ F S E AT ++ G I+ L + L K+D +
Sbjct: 332 TGAR--SKGFGFVCFSSPEEATKAVTEMNGRIIVQKPLYVALAQRKEDRR 379
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN + + + +L++ F G+IT A++M + GKSR F F+ F AE+A+K
Sbjct: 192 TNVYVKNFGEELDDGKLKEMFEVYGKITSARVMTDQTGKSRGFGFVSFENPDNAEQAVKE 251
Query: 61 FN 62
N
Sbjct: 252 LN 253
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDG-KSRQFAFIGFRTEQEAEEAIKYF 61
+ VKNL + ++RLR F+ G IT AK+M G +S+ F F+ F + +EA +A+
Sbjct: 298 LYVKNLDDVIDDERLRREFAPYGTITSAKVMMDSTGARSKGFGFVCFSSPEEATKAVTEM 357
Query: 62 N 62
N
Sbjct: 358 N 358
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ +KNL K + + D FS G I ++ + G SR + F+ F TE+ A EAI N
Sbjct: 101 VFIKNLHKDIDNKAIFDTFSAFGNILSCRVATDEQGNSRGYGFVHFETEEAANEAINKVN 160
Query: 63 KSYLD 67
L+
Sbjct: 161 GMLLN 165
>gi|296121841|ref|YP_003629619.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM 3776]
gi|296014181|gb|ADG67420.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM 3776]
Length = 146
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V NLPY T D+LRE FS+ G V+ +V D++T RS+G +V + + A RA+E +
Sbjct: 5 LYVGNLPYGTTADDLREAFSEHGTVTRAQVVSDRETGRSRGFGFV--EMSDGAERAVEAM 62
Query: 361 DNSIFQGRLLHVMPARHKK 379
+ + FQGR L V AR ++
Sbjct: 63 NGAEFQGRTLTVNEARPRE 81
>gi|356546384|ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
Length = 956
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFV NLPY+ + +L E FS+ G V +V K + + +G YV +A+ E A+RAIE+
Sbjct: 20 LFVSNLPYSFSNSQLEETFSQVGPVRRCFMVTQKGSAQHRGFGYVQFAVEEDANRAIELK 79
Query: 361 DNSIFQGRLL---HVMP 374
+ + +GR + H MP
Sbjct: 80 NGTSVEGRKIVVKHAMP 96
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L +RNLP+ A ++E+R+ FS G V +V I DT SKG A+V + + A +AI+
Sbjct: 276 KLIIRNLPFKAKDNEIRDMFSSAGYVWDVFIPQKPDTGLSKGFAFVKFTCKQDAEKAIQK 335
Query: 360 LDNSIFQGRLLHVMPARHKK--SSD 382
L+ S F RL+ V A KK SSD
Sbjct: 336 LNGSKFAKRLIAVDWAVSKKIFSSD 360
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 28/196 (14%)
Query: 258 DSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKD-------VQQEVLESGRLFVRNLPYTA 310
D I+KD+ E++ +G++ P SS++ +++ L+ G +F+ NLP+
Sbjct: 455 DEIVKDA-----DEKNESGKVSGVSKPEISSRNNLSIPKRTEEDDLQ-GTVFICNLPFEC 508
Query: 311 TEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLL 370
+E+++ FS FG V V+ + TKR +G ++ + E+A+ AI + G LL
Sbjct: 509 DNEEVKQRFSGFGEVEYFVPVLHQVTKRPRGTGFLKFKTVEAANTAISTASAASGMGILL 568
Query: 371 HVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVEN 430
P + K+ DK+ H+ +E E+ +E + N + ++E
Sbjct: 569 KGRPLKVLKALDKKSAHD------------KELEKAKNEVHDHR---NLYLAKEGLILEG 613
Query: 431 IARKHGVSKSDLLDRE 446
GVS SD+L R+
Sbjct: 614 TTAAEGVSASDMLKRQ 629
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 19/129 (14%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKY 60
++ ++NLP ++ +RD FS G + D + + D G S+ FAF+ F +Q+AE+AI+
Sbjct: 276 KLIIRNLPFKAKDNEIRDMFSSAGYVWDVFIPQKPDTGLSKGFAFVKFTCKQDAEKAIQK 335
Query: 61 FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTIEK 120
N S I+ + W+ K++ + N LA+++G+K ++
Sbjct: 336 LNGSKFAKRLIAVD-------------WAV-----SKKIFSSDTNNALASEKGQKNLSDE 377
Query: 121 VTENDDPQL 129
+ +DD +L
Sbjct: 378 DSTDDDFEL 386
>gi|367030447|ref|XP_003664507.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
gi|347011777|gb|AEO59262.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
Length = 186
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+FV N+ Y+ + +EL+ HF G+++ V I++DK T + KG AYV ++ P+ ++A+ VL
Sbjct: 63 IFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSEPQLVAQAL-VL 121
Query: 361 DNSIFQGRLLHVMPAR 376
++S+F+GR + V P R
Sbjct: 122 NDSVFKGRNIKVEPKR 137
>gi|255939756|ref|XP_002560647.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585270|emb|CAP92947.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 191
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+FV N+ Y A+ +E++ HF G+++ V I++DK + + KG AYV +A P ++A+ VL
Sbjct: 73 IFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQAL-VL 131
Query: 361 DNSIFQGRLLHVMPAR 376
+ S+F+GR L V+P R
Sbjct: 132 NESVFRGRNLKVVPKR 147
>gi|426383231|ref|XP_004058190.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Gorilla
gorilla gorilla]
Length = 275
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 271 EEDANGEIVDPGNPSSSSKDVQQEVLESGR--LFVRNLPYTATEDELREHFSKFGNVSEV 328
E A G+++ P +E +E+ ++V N+ Y + +EL HFS+ G V V
Sbjct: 114 EGTAAGQLLSPETMGCPLPGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRV 173
Query: 329 HIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
I+ DK + KG AY+ +A S A+E LD S+F+GR++ V+P R
Sbjct: 174 TILCDKFSGHPKGYAYIEFATKGSVQAAVE-LDQSLFRGRVIKVLPKR 220
>gi|326931817|ref|XP_003212020.1| PREDICTED: embryonic polyadenylate-binding protein-like [Meleagris
gallopavo]
Length = 633
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 174/413 (42%), Gaps = 55/413 (13%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L TE L E FS G + + + D ++RS G AY+ + P A RA++ +
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERALDTM 72
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNT-KAWNS 419
+ + +GR P R S L S G + + ++ ++A +T A+ +
Sbjct: 73 NFEVIKGR-----PVRIMWSQRDPGLRKS---GVGNVFIKNLDDSIDNKALYDTFSAFGN 124
Query: 420 LFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSL 479
+ EN +R HG + E + A R ++ +K +
Sbjct: 125 ILSCKVVCDENGSRGHG-----FVHFETQEAATRAIETMNGMLLNDRKVFVGHFKSRKER 179
Query: 480 E-EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFG-SLD-KVILPST---KTLA 533
E EF A ++ +N +KN D + L ++F +FG +L KV++ +T K
Sbjct: 180 EAEFGA---RAMEFTN--VYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDNTGRSKGFG 234
Query: 534 LVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKR 593
V F + EA A + K G +Y+ A + QS + KR
Sbjct: 235 FVNFEKHEEAQKAVADMNGKEINGRMVYVGRAQKRLERQS----------------ELKR 278
Query: 594 ALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKH 653
+ + E V+ R + +L+VKNL+ DE LRK F + G I S KV
Sbjct: 279 KFEQMKQERVS-------RYQGVNLYVKNLDDGIDDERLRKEFSPY---GTITSAKV--- 325
Query: 654 LKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVV 706
+ G + S GFGF+ F S E AT ++ G I+ L + L K++ + +
Sbjct: 326 MTEGGH-SKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ++RLR FS G IT AK+M T+ G S+ F F+ F + +EA +A+ N
Sbjct: 296 LYVKNLDDGIDDERLRKEFSPYGTITSAKVM-TEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 63 KSYLDTCRISCEIARK 78
+ T + +A++
Sbjct: 355 GRIVSTKPLYVALAQR 370
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
+E ++++N ++ LRE FS+FG V +++D +T RSKG +V + E A +
Sbjct: 188 MEFTNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMD-NTGRSKGFGFVNFEKHEEAQK 246
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQ 384
A+ ++ GR+++V R +K ++Q
Sbjct: 247 AVADMNGKEINGRMVYV--GRAQKRLERQ 273
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G +F++NL + L + FS FGN+ +V D++ R G +V + E+A+RAIE
Sbjct: 99 GNVFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSRGHG--FVHFETQEAATRAIE 156
Query: 359 VLDNSIFQGRLLHVMPARHKKSSDKQE 385
++ + R + V H KS ++E
Sbjct: 157 TMNGMLLNDRKVFV---GHFKSRKERE 180
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KN + ++RLR+ FS+ G+ K+M G+S+ F F+ F +EA++A+
Sbjct: 191 TNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDNTGRSKGFGFVNFEKHEEAQKAVAD 250
Query: 61 FN 62
N
Sbjct: 251 MN 252
>gi|388521117|gb|AFK48620.1| unknown [Lotus japonicus]
Length = 161
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+ ++FV+ L ++ TED+L E FS++G V + IV+++ RSKG YV +A E A +A
Sbjct: 68 TSKIFVKGLAFSTTEDKLAEAFSQYGKVLKADIVLNRAKTRSKGFGYVTFAKEEDAQKAQ 127
Query: 358 EVLDNSIFQGRLLHV---MPARHKKS 380
++ I GR+L+V P +HKKS
Sbjct: 128 IGMNRKILHGRVLYVDMEPPDKHKKS 153
>gi|197632397|gb|ACH70922.1| elongation factor-1 delta-1 [Salmo salar]
Length = 203
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G+LFV L + E L E FSK+GN+++V +V D++T+RS+G +V + PE A A+
Sbjct: 5 GKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMA 64
Query: 359 VLDNSIFQGRLLHV 372
++ GR++ V
Sbjct: 65 AMNGKSVDGRMIRV 78
>gi|116201543|ref|XP_001226583.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
gi|88177174|gb|EAQ84642.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
Length = 250
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
Query: 238 DGEEEEEEENDH-NGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVL 296
D E+ +E DH NGD++EE S +K + E E+ + + +E +
Sbjct: 65 DEEKPHDETRDHANGDNDEEEISAMKLRVAEMEAEAAKLREMQASLDQARQDLSEDKEDI 124
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
++ +FV N+ Y+ + +EL+ HF G+++ V I++DK T + KG AYV ++ P ++A
Sbjct: 125 DNRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSEPNLVAQA 184
Query: 357 IEVLDNSIFQGRLLHVMPAR 376
+ VL++S+F+GR + V P R
Sbjct: 185 L-VLNDSVFKGRNIKVEPKR 203
>gi|336276750|ref|XP_003353128.1| hypothetical protein SMAC_03445 [Sordaria macrospora k-hell]
gi|380092612|emb|CCC09889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 754
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 172/465 (36%), Gaps = 122/465 (26%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L + TE L E FS+ G+V+ + + D T+RS G AYV Y +A+
Sbjct: 60 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 119
Query: 358 EVLDNSIFQGRLLHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQR 400
E L+ ++ +GR +M PA K + D + LH++ + L +
Sbjct: 120 EELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILSCK 179
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
A + GN+K + + D A KH LL+ + + I + Q
Sbjct: 180 -----VAQDEHGNSKGYGFVHYETDEAASQ-AIKH--VNGMLLNEKKVYVGHHIPKKDRQ 231
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
S EE A T+ VKN+ ++ ++ E ++F KFG
Sbjct: 232 ----------------SKFEEMKANFTN--------VYVKNINHEVTDDEFRELFEKFGE 267
Query: 521 LDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
+ L T+ V F AA A L K ++G LY+ A
Sbjct: 268 VTSSSLARDQEGKTRGFGFVNFTTHEAAAKAVDDLNGKDFRGQDLYVGRA---------- 317
Query: 576 SKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKH 635
K +++ + + ++A R + +GV +L++KNL DE LR
Sbjct: 318 QKKHEREEELRRSYEAARLEKANKYQGV-------------NLYIKNLGDDVDDEKLRAM 364
Query: 636 FGEHIKEGRILSVKV----------------------------------------KKHLK 655
F E+ G I S KV K K
Sbjct: 365 FSEY---GPITSAKVMRDSLIEGEEKDEKDKENKKEGETKEEEEKEGSAEKKTEKKGDRK 421
Query: 656 NGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
GK S GFGF+ F + + AT ++ ++DG L + L K
Sbjct: 422 LGK--SKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRK 464
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN+ VT+D R+ F + GE+T + L R ++GK+R F F+ F T + A +A+
Sbjct: 242 TNVYVKNINHEVTDDEFRELFEKFGEVTSSSLARDQEGKTRGFGFVNFTTHEAAAKAVDD 301
Query: 61 FN 62
N
Sbjct: 302 LN 303
>gi|154310272|ref|XP_001554468.1| hypothetical protein BC1G_07056 [Botryotinia fuckeliana B05.10]
gi|347836575|emb|CCD51147.1| hypothetical protein [Botryotinia fuckeliana]
Length = 194
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E ++S +FV N+ Y+A+ ++++ HF G+++ V I++DK T KG AYV + P
Sbjct: 60 KEDIDSRSIFVGNVDYSASPEDIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFVEPSL 119
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V+P R
Sbjct: 120 VAQAL-VLNESVFKGRNLKVVPKR 142
>gi|452821941|gb|EME28965.1| hypothetical protein Gasu_35400 [Galdieria sulphuraria]
Length = 279
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
R++V N+PYT E+++H + G V VH+ +DK KRSKG A V Y E+A +A+E+
Sbjct: 98 RVYVGNIPYTVRWQEIKDHMREAGPVQYVHLFLDK-LKRSKGSALVEYMTEEAAQKAVEL 156
Query: 360 LDNSIFQGRLLHV 372
L+NS+ GR L V
Sbjct: 157 LNNSVIAGRSLVV 169
>gi|340905324|gb|EGS17692.1| putative nucleolar protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 834
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 11/112 (9%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E+ +LFVR+LP TAT ++L E FS++ V +V+D TK S+G +V + P+ A A
Sbjct: 44 ETRQLFVRSLPPTATSEKLTEFFSQYYPVKHATVVLDPKTKESRGFGFVAFTDPDDALEA 103
Query: 357 IEVLDNSIFQGRLLH--VMPARHKKSSDKQELHNSTSQGTKTLKQRREEERK 406
E L N F+GR L + RH+ N G + + + EE+RK
Sbjct: 104 KEKLQNFYFEGRHLKLDIAHPRHR---------NPEKSGVEAVTKAIEEKRK 146
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
S +FVRNLPYT T++ L+ HF++FG V +V+DK T + G +V +
Sbjct: 394 STTIFVRNLPYTTTDETLKAHFTRFGPVRYARVVIDKTTDKPAGTGFVCF 443
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 28/134 (20%)
Query: 612 RVESRSLFVKNLNFKTCDENLRKHFGEH--IKEGRI-LSVKVKKHLKNGKNVSMGFGFIE 668
R E+R LFV++L E L + F ++ +K + L K K+ S GFGF+
Sbjct: 42 RTETRQLFVRSLPPTATSEKLTEFFSQYYPVKHATVVLDPKTKE--------SRGFGFVA 93
Query: 669 FDSVETATNVCRDLQGTILDGHALILQLCHA------KKDEQVVKKA-----------EK 711
F + A LQ +G L L + H K + V KA E
Sbjct: 94 FTDPDDALEAKEKLQNFYFEGRHLKLDIAHPRHRNPEKSGVEAVTKAIEEKRKRELEKEL 153
Query: 712 DKSSTKLLVRNVAF 725
K KL++RN+ +
Sbjct: 154 KKQPPKLIIRNLPW 167
>gi|397468279|ref|XP_003805819.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Pan paniscus]
Length = 278
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 271 EEDANGEIVDPGNPSSSSKDVQQEVLESGR--LFVRNLPYTATEDELREHFSKFGNVSEV 328
E A G+++ P +E +E+ ++V N+ Y + +EL HFS+ G V V
Sbjct: 117 EGTAAGQLLSPETTGCRLPGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRV 176
Query: 329 HIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPAR 376
I+ DK + KG AY+ +A S A+E LD S+F+GR++ V+P R
Sbjct: 177 TILCDKFSGHPKGYAYIEFATKGSVQAAVE-LDQSLFRGRVIKVLPKR 223
>gi|389635639|ref|XP_003715472.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
gi|351647805|gb|EHA55665.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
Length = 193
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
++S +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P ++
Sbjct: 70 VDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGFAYVEFTEPSLVAQ 129
Query: 356 AIEVLDNSIFQGRLLHVMPAR 376
A+ VL+ S+F+GR + V P R
Sbjct: 130 AL-VLNESVFKGRNIKVSPKR 149
>gi|189345649|ref|YP_001942178.1| RNP-1 like RNA-binding protein [Chlorobium limicola DSM 245]
gi|189339796|gb|ACD89199.1| RNP-1 like RNA-binding protein [Chlorobium limicola DSM 245]
Length = 90
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+++ NLPY+ TED+LR+ FS+FG V +I+ DK + RSKG +V I A AIE +
Sbjct: 3 IYIGNLPYSVTEDDLRDVFSQFGQVDSANIITDKFSGRSKGFGFVDMPIDGEAREAIESM 62
Query: 361 DNSIFQGRLLHV 372
++ +GR + V
Sbjct: 63 NDKDLKGRTIKV 74
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKYF 61
I + NLP VTED LRD FSQ G++ A ++ K G+S+ F F+ + EA EAI+
Sbjct: 3 IYIGNLPYSVTEDDLRDVFSQFGQVDSANIITDKFSGRSKGFGFVDMPIDGEAREAIESM 62
Query: 62 N 62
N
Sbjct: 63 N 63
>gi|194334049|ref|YP_002015909.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
gi|194311867|gb|ACF46262.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 90
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+++ NL Y TE++LRE F +FG+VS +I+ DK T RSKG +V + + A+ AIE L
Sbjct: 3 IYIGNLDYGVTEEDLREAFGEFGDVSSANIITDKFTGRSKGFGFVEMSSSDDANEAIESL 62
Query: 361 DNSIFQGRLLHVMPARHK 378
+++ GR + V A+ +
Sbjct: 63 NDTDLNGRTIKVNEAKPR 80
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKYF 61
I + NL VTE+ LR+ F + G+++ A ++ K G+S+ F F+ + +A EAI+
Sbjct: 3 IYIGNLDYGVTEEDLREAFGEFGDVSSANIITDKFTGRSKGFGFVEMSSSDDANEAIESL 62
Query: 62 NKSYLDTCRISCEIARKVGDPNMPRPWSRY 91
N + L+ I A+ P RP RY
Sbjct: 63 NDTDLNGRTIKVNEAK----PRAERPARRY 88
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
++++ NL++ +E+LR+ FGE G + S + G+ S GFGF+E S + A
Sbjct: 2 NIYIGNLDYGVTEEDLREAFGEF---GDVSSANIITDKFTGR--SKGFGFVEMSSSDDAN 56
Query: 677 NVCRDLQGTILDGHAL 692
L T L+G +
Sbjct: 57 EAIESLNDTDLNGRTI 72
>gi|344292751|ref|XP_003418089.1| PREDICTED: putative RNA-binding protein 3-like [Loxodonta africana]
Length = 154
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESLDGRQIRV 79
Score = 42.4 bits (98), Expect = 0.88, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L HF ++ VK ++ + S GFGFI F + E
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQR-----SRGFGFITFTNPE 58
Query: 674 TATNVCRDLQGTILDGHALILQLCHAKK 701
A++ R + G LDG +++ HA K
Sbjct: 59 HASDAMRAMNGESLDGRQ--IRVDHAGK 84
>gi|212528088|ref|XP_002144201.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
gi|210073599|gb|EEA27686.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
Length = 190
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T KG AYV +A P
Sbjct: 61 KEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFAEPSL 120
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V P R
Sbjct: 121 VAQAL-VLNESVFRGRNLKVTPKR 143
>gi|13785947|gb|AAK39523.1| RNA-binding motif protein 3 [Rattus norvegicus]
Length = 127
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESLDGRQIRV 79
Score = 42.4 bits (98), Expect = 0.88, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L HF ++ VK ++ + S GFGFI F + E
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQR-----SRGFGFITFTNPE 58
Query: 674 TATNVCRDLQGTILDGHALILQLCHAKK 701
A++ R + G LDG +++ HA K
Sbjct: 59 HASDAMRAMNGESLDGRQ--IRVDHAGK 84
>gi|386755840|ref|YP_006229057.1| hypothetical protein HPPC18_04085 [Helicobacter pylori PeCan18]
gi|420440632|ref|ZP_14939587.1| RNA binding protein [Helicobacter pylori Hp H-30]
gi|420474344|ref|ZP_14973020.1| RNA binding protein [Helicobacter pylori Hp H-19]
gi|420484188|ref|ZP_14982814.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-3]
gi|420499955|ref|ZP_14998507.1| RNA binding protein [Helicobacter pylori Hp P-26]
gi|420514547|ref|ZP_15013018.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-3b]
gi|384562098|gb|AFI02564.1| hypothetical protein HPPC18_04085 [Helicobacter pylori PeCan18]
gi|393055787|gb|EJB56700.1| RNA binding protein [Helicobacter pylori Hp H-30]
gi|393089480|gb|EJB90120.1| RNA binding protein [Helicobacter pylori Hp H-19]
gi|393101055|gb|EJC01628.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-3]
gi|393149189|gb|EJC49501.1| RNA binding protein [Helicobacter pylori Hp P-26]
gi|393156693|gb|EJC56956.1| ss-DNA binding protein 12RNP2 [Helicobacter pylori Hp P-3b]
Length = 82
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+AT D+++E FS+FG V V ++ D++TK+ KG +V E AI L
Sbjct: 4 IYVGNLVYSATSDQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQ-EEGVREAIAKL 62
Query: 361 DNSIFQGRLLHVMPARHKKS 380
DN+ F GR + V A KKS
Sbjct: 63 DNTDFMGRTIRVTEANPKKS 82
>gi|171677925|ref|XP_001903913.1| hypothetical protein [Podospora anserina S mat+]
gi|170937031|emb|CAP61689.1| unnamed protein product [Podospora anserina S mat+]
Length = 209
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+FV N+ Y+A+ +EL+ HF G+++ V I++DK T + KG AYV ++ P ++A+ VL
Sbjct: 74 VFVGNVDYSASPEELQSHFGDCGSINRVTILLDKFTGQPKGYAYVEFSEPNMVAQAL-VL 132
Query: 361 DNSIFQGRLLHVMPAR 376
++S+F+GR + V P R
Sbjct: 133 NDSLFKGRNIKVEPKR 148
>gi|307109347|gb|EFN57585.1| hypothetical protein CHLNCDRAFT_143267 [Chlorella variabilis]
Length = 521
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+F++NLP+ A ED +RE F++ G ++EV I D+DT R+KG A+V + E A++A +
Sbjct: 261 IFMKNLPWAAEEDTIREFFAECGPIAEVRIAYDRDTGRAKGFAHVQFEELEGAAKATALS 320
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGT 394
S+ R L++ ++ E +TS GT
Sbjct: 321 GESLMD-RELYIESTTERQQRTPGENRFATSDGT 353
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKYF 61
I +KNLP ED +R+FF++ G I + ++ +D G+++ FA + F + A +A
Sbjct: 261 IFMKNLPWAAEEDTIREFFAECGPIAEVRIAYDRDTGRAKGFAHVQFEELEGAAKATALS 320
Query: 62 NKSYLD 67
+S +D
Sbjct: 321 GESLMD 326
>gi|281353659|gb|EFB29243.1| hypothetical protein PANDA_006181 [Ailuropoda melanoleuca]
Length = 148
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESLDGRQIRV 79
Score = 42.4 bits (98), Expect = 0.93, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L HF ++ VK ++ + S GFGFI F + E
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQR-----SRGFGFITFTNPE 58
Query: 674 TATNVCRDLQGTILDGHALILQLCHAKK 701
A++ R + G LDG +++ HA K
Sbjct: 59 HASDAMRAMNGESLDGRQ--IRVDHAGK 84
>gi|425774334|gb|EKV12642.1| hypothetical protein PDIG_42430 [Penicillium digitatum PHI26]
gi|425777024|gb|EKV15220.1| hypothetical protein PDIP_41010 [Penicillium digitatum Pd1]
Length = 191
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+FV N+ Y A+ +E++ HF G+++ V I++DK + + KG AYV +A P ++A+ VL
Sbjct: 73 IFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQAL-VL 131
Query: 361 DNSIFQGRLLHVMPAR 376
+ S+F+GR L V+P R
Sbjct: 132 NESVFRGRNLKVVPKR 147
>gi|296484918|tpg|DAA27033.1| TPA: zinc finger CCHC-type and RNA binding motif 1-like [Bos
taurus]
Length = 217
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 47/70 (67%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++ T ++L FSK+G V +V I+ DKDT+RSKG+A++L+ +SA +
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQNCTRAI 71
Query: 361 DNSIFQGRLL 370
+N GR++
Sbjct: 72 NNKQLFGRVI 81
>gi|71013016|ref|XP_758548.1| hypothetical protein UM02401.1 [Ustilago maydis 521]
gi|46098206|gb|EAK83439.1| hypothetical protein UM02401.1 [Ustilago maydis 521]
Length = 204
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 292 QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPE 351
++E ++S ++V N+ Y AT +E+++HF G ++ V I+ DK T KG AYV +A P
Sbjct: 88 EREEVDSRSIYVGNVDYGATPEEVQQHFQSCGTINRVTILCDKFTGHPKGFAYVEFAEPS 147
Query: 352 SASRAIEVLDNSIFQGRLLHVMPAR 376
+ A+ VL+ S+F+GRL+ V R
Sbjct: 148 LVANAM-VLNESLFRGRLIKVTAKR 171
>gi|344267834|ref|XP_003405770.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Loxodonta africana]
Length = 217
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 47/70 (67%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++ T ++L FSK+G V +V I+ DKDT++SKG+A++L+ ESA +
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCTRAI 71
Query: 361 DNSIFQGRLL 370
+N GR++
Sbjct: 72 NNKQLFGRMI 81
>gi|393233178|gb|EJD40752.1| hypothetical protein AURDEDRAFT_127483 [Auricularia delicata
TFB-10046 SS5]
Length = 878
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+FV NLPYTAT +L+ FS G V +V DK+TK SKG+ YV +AI E A RA+
Sbjct: 15 VFVSNLPYTATSVDLQTLFSDVGPVRSAFVVQDKETKISKGVGYVSFAIREDAERAM--T 72
Query: 361 DNSIFQGRLLHV-MPARHKKSSD 382
D GR L V P++ K D
Sbjct: 73 DTYDMDGRTLRVQWPSQKNKDGD 95
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
+FVRN+PY AT+D+LR F FG + + +D D+ RS+G + + E A +E
Sbjct: 404 VFVRNVPYDATDDDLRTLFRAFGPLRYARVTMDHDSGRSRGTGFACFWNKEDADAVVE 461
>gi|224059648|ref|XP_002299951.1| predicted protein [Populus trichocarpa]
gi|222847209|gb|EEE84756.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 280 DPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS 339
+P P SS+ E +S +FV N+ + AT+D L HF+KFG V +V +V D T +
Sbjct: 486 EPQKPPSSASGRPLEDADSRTIFVSNVHFAATKDSLSRHFNKFGEVLKVVLVTDAATGQP 545
Query: 340 KGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQE 385
G AYV + E+A A+ LD + F R++ VM K+SS QE
Sbjct: 546 TGSAYVEFMRKEAADNALS-LDGTSFMSRIVKVM----KRSSSNQE 586
>gi|296803623|ref|XP_002842664.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
gi|238846014|gb|EEQ35676.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
Length = 186
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T KG AYV ++ P
Sbjct: 61 KEDIDARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSL 120
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V+P R
Sbjct: 121 VAQAL-VLNESLFRGRNLKVVPKR 143
>gi|225557655|gb|EEH05941.1| polyadenylate-binding protein [Ajellomyces capsulatus G186AR]
gi|240278336|gb|EER41843.1| polyadenylate-binding protein [Ajellomyces capsulatus H143]
gi|325096361|gb|EGC49671.1| polyadenylate-binding protein [Ajellomyces capsulatus H88]
Length = 784
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 182/493 (36%), Gaps = 140/493 (28%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
P+S+ Q S L+V L + TE L E FS G V+ + + D T+RS G A
Sbjct: 42 PNSAGPSTTQP--HSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYA 99
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREE 403
YV Y RA+E L+ ++ +G+ +M QR
Sbjct: 100 YVNYNNTADGERALEDLNYTLIKGKPCRIM-----------------------WSQRDPA 136
Query: 404 ERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIA---LGETQ 460
RK T N DT ++N A D N L+ ++A G ++
Sbjct: 137 LRK-------TGQGNVFIKNLDTAIDNKALH------DTFAAFGNILSCKVAQDEFGNSK 183
Query: 461 ----VIAETKKALTNAGVNVSSL----EEFSAG----------KTDGLKRSNHVFLVKNL 502
V ET +A TNA +V+ + ++ G K + +K + VKNL
Sbjct: 184 GYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNL 243
Query: 503 PYDSSEGELAKMFGKFGSLDKVILP------STKTLALVVFLEPVEAAAAFKGLAYKRYK 556
+ S E ++F K+G + + ++ V F++ AAAA + L K YK
Sbjct: 244 DTEVSNEEFRELFEKYGEITSASISRDGETGKSRGFGFVNFVKHESAAAAVEELNDKEYK 303
Query: 557 GVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESR 616
G LY+ A K +++ + + +H+A R + +GV
Sbjct: 304 GQKLYVGRA----------QKKHEREEELRKQHEAARVEKASKYQGV------------- 340
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV--------------KKHLKNGKNV-- 660
+L+VKNL DE LR F I G I S +V +K N +NV
Sbjct: 341 NLYVKNLTDDIDDEKLRDLF---ISFGNITSARVMRDTAGDPGSESEKEKESANKENVKD 397
Query: 661 ---------------------------------SMGFGFIEFDSVETATNVCRDLQGTIL 687
S GFGF+ F + + A+ ++ ++
Sbjct: 398 EAKKESGEEDSADKSDKVEKSDSKNATEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMV 457
Query: 688 DGHALILQLCHAK 700
+G L + L K
Sbjct: 458 NGKPLYVALAQRK 470
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK-HLKNGKNVSMGFGFIEFDSVETA 675
++F+KNL+ ++ L F G ILS KV + N K G+GF+ +++ E A
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAF---GNILSCKVAQDEFGNSK----GYGFVHYETAEAA 196
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
TN + + G +L+ + + AKKD Q K E + T + V+N+
Sbjct: 197 TNAIKHVNGMLLNEKKVFVGHHIAKKDRQ-SKFEEMKANFTNVYVKNL 243
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
+ + VKNL V+ + R+ F + GEIT A + R + GKSR F F+ F + A A++
Sbjct: 236 TNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRGFGFVNFVKHESAAAAVE 295
Query: 60 YFN 62
N
Sbjct: 296 ELN 298
>gi|384897532|ref|YP_005772960.1| Nucleotide binding protein [Helicobacter pylori Lithuania75]
gi|317012637|gb|ADU83245.1| Nucleotide binding protein [Helicobacter pylori Lithuania75]
Length = 82
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+AT ++++E FS+FG V V ++ D++TK+ KG ++ E S AI L
Sbjct: 4 IYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFIEMQ-EEGVSEAIAKL 62
Query: 361 DNSIFQGRLLHVMPARHKKS 380
DN+ F GR + V A KKS
Sbjct: 63 DNTDFMGRTIRVTEANPKKS 82
>gi|148702007|gb|EDL33954.1| mCG116386, isoform CRA_d [Mus musculus]
Length = 106
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 357 IEVLDNSI 364
+ ++ +
Sbjct: 64 MRAMNGEV 71
Score = 40.8 bits (94), Expect = 2.9, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L HF G I V V K + + S GFGFI F + E
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSF---GPISEVVVVKDRETQR--SRGFGFITFTNPE 58
Query: 674 TATNVCRDLQGTI 686
A++ R + G +
Sbjct: 59 HASDAMRAMNGEV 71
>gi|395748220|ref|XP_003778730.1| PREDICTED: LOW QUALITY PROTEIN: embryonic polyadenylate-binding
protein 2 [Pongo abelii]
Length = 278
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 15/133 (11%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V N+ Y + +EL HFS+ G V V I+ DK + KG AY+ +A S A+E L
Sbjct: 149 VYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKRSVQAAVE-L 207
Query: 361 DNSIFQGRLLHVMPARHK----KSSDKQELHNSTSQGTK-------TLKQR-REEERKAS 408
D S+F+GR++ V+P R S+D+ L QG++ +L+ R R R +
Sbjct: 208 DQSLFRGRVIKVLPKRTNFPGISSTDRGGLRG--HQGSRGAPFPHSSLQGRPRLRSRGQN 265
Query: 409 EASGNTKAWNSLF 421
A G W S +
Sbjct: 266 RARGKFSPWFSPY 278
>gi|410918793|ref|XP_003972869.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Takifugu rubripes]
Length = 216
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++ T ++L + F+K+G V +V IV DKDT+RSKG+A+VL+ ESA + +
Sbjct: 12 VYVSNLPFSLTNNDLHKLFTKYGKVVKVTIVKDKDTRRSKGVAFVLFLDRESARNCVRAI 71
Query: 361 DN 362
+N
Sbjct: 72 NN 73
>gi|224088555|ref|XP_002308472.1| predicted protein [Populus trichocarpa]
gi|222854448|gb|EEE91995.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 28/254 (11%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+++ +P A+E++L+E G V+E+ I+ KD+ SKG A+V + E AS+AIE L
Sbjct: 70 VYLGGIPPDASEEDLKEFCESIGEVTEIRIMKGKDSSESKGYAFVTFRTKELASKAIEEL 129
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+N+ F+G+ + K S Q H G E+ +KA + +G NS+
Sbjct: 130 NNTEFKGKKV--------KCSTSQANHR-LFIGNVPRNWGEEDMKKAVKKTG--PGVNSV 178
Query: 421 FMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLE 480
+ D +N +R G + + + + + ++ ++ + L + VS +
Sbjct: 179 ELLKDP--QNPSRNRGFAFIEYYNHACAEYSRKM-------MSSPEFKLDDNAPTVSWAD 229
Query: 481 EFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPSTKT------LAL 534
+AG + + VKNLP D ++ L ++F G + KV+LP K
Sbjct: 230 PKNAGSSAASQVK--AVYVKNLPEDINQDRLRQLFEHHGKVTKVVLPPAKPGHEKSRFGF 287
Query: 535 VVFLEPVEAAAAFK 548
V F E A A K
Sbjct: 288 VHFAERSSAMKALK 301
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S + + +P +E+ L++F GE+T+ ++M+ KD +S+ +AF+ FRT++ A +AI+
Sbjct: 68 SEVYLGGIPPDASEEDLKEFCESIGEVTEIRIMKGKDSSESKGYAFVTFRTKELASKAIE 127
Query: 60 YFNKSYLDTCRISCEIARK-----VGDPNMPRPWSRYSLKK 95
N + ++ C ++ +G N+PR W +KK
Sbjct: 128 ELNNTEFKGKKVKCSTSQANHRLFIG--NVPRNWGEEDMKK 166
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDG--KSRQFAFIGFRTEQEAEEAIKY 60
+ VKNLP+ + +DRLR F G++T L K G KSR F F+ F A +A+K
Sbjct: 244 VYVKNLPEDINQDRLRQLFEHHGKVTKVVLPPAKPGHEKSR-FGFVHFAERSSAMKALKN 302
Query: 61 FNKSYLDTCRISCEIARKVGD 81
K +D + C +A+ D
Sbjct: 303 TEKYKIDGQVLDCSLAKPQAD 323
>gi|295674319|ref|XP_002797705.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280355|gb|EEH35921.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 822
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 152/394 (38%), Gaps = 81/394 (20%)
Query: 282 GNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKG 341
GN + +S S L+V L + TE L E FS G V+ + + D T+RS G
Sbjct: 37 GNETPNSAAPTNAQPHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLG 96
Query: 342 IAYVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHKKSS------------DKQ 384
AYV Y RA+E L+ ++ +G+ +M PA K D +
Sbjct: 97 YAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNK 156
Query: 385 ELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLD 444
LH++ + L + A + GN+K + + N A KH LL+
Sbjct: 157 ALHDTFAAFGNILSCKV-----AQDEFGNSKGYGFVHYETAEAATN-AIKH--VNGMLLN 208
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPY 504
+ + IA + Q S EE A T+ VKNL
Sbjct: 209 EKKVFVGHHIAKKDRQ----------------SKFEEMKANFTN--------VYVKNLEP 244
Query: 505 DSSEGELAKMFGKFGSLDKVILP------STKTLALVVFLEPVEAAAAFKGLAYKRYKGV 558
+ + E ++F K+G + L ++ V F+ AAAA + L K YKG
Sbjct: 245 EVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVEDLNDKEYKGQ 304
Query: 559 PLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSL 618
LY+ A K +++ + + +H+A R + +GV +L
Sbjct: 305 KLYVGRA----------QKKHEREEELRKQHEAARVEKASKYQGV-------------NL 341
Query: 619 FVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK 652
+VKNL DE LR F I G I S +V +
Sbjct: 342 YVKNLTDDIDDEKLRDLF---IGFGNITSARVMR 372
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR-TKDGKSRQFAFIGFRTEQEAEEAIK 59
+ + VKNL VT + R+ F + GEIT A L R + GKSR F F+ F A A++
Sbjct: 235 TNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAAVE 294
Query: 60 YFN 62
N
Sbjct: 295 DLN 297
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK-HLKNGKNVSMGFGFIEFDSVETA 675
++F+KNL+ ++ L F G ILS KV + N K G+GF+ +++ E A
Sbjct: 143 NVFIKNLDTAIDNKALHDTFAAF---GNILSCKVAQDEFGNSK----GYGFVHYETAEAA 195
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
TN + + G +L+ + + AKKD Q K E + T + V+N+
Sbjct: 196 TNAIKHVNGMLLNEKKVFVGHHIAKKDRQ-SKFEEMKANFTNVYVKNL 242
>gi|430811633|emb|CCJ30944.1| unnamed protein product [Pneumocystis jirovecii]
Length = 176
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E ++S ++V N+ Y AT +E++ HF G ++ V I+ D+ + KG AY+ ++ P
Sbjct: 57 KEDIDSRSVYVGNVDYGATPEEIQAHFQTCGTINRVTILCDRYSGHPKGFAYIEFSEPGL 116
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
+A+ VL+ S+F+GRLL V+P R
Sbjct: 117 VPQAL-VLNESLFRGRLLKVVPKR 139
>gi|115470657|ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|34394882|dbj|BAC84331.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113610463|dbj|BAF20841.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|125557292|gb|EAZ02828.1| hypothetical protein OsI_24955 [Oryza sativa Indica Group]
gi|215695203|dbj|BAG90394.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740788|dbj|BAG96944.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 348
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E GRLFV NLPYT T E+ + FS+ G V V I+ DK T RS+G A+V A E A+ A
Sbjct: 116 EPGRLFVGNLPYTMTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATA 175
Query: 357 IEVLDNSIFQGRLLHV 372
I++ + ++ GR V
Sbjct: 176 IQMFNGALLGGRTARV 191
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+++ NL + D LR F + + ++ ++D+ RS+G +V + E A A+E
Sbjct: 221 KIYAGNLGWGVRADALRAAFEGQPGLLDARVIFERDSGRSRGFGFVSFRTAEDAQAALEA 280
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
LD +GR L + A ++ G+ + Q +EEE ASE+S
Sbjct: 281 LDGVELEGRPLRLSMAEQNPTA-----------GSPSTVQSQEEE-TASESS 320
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKY 60
+I NL V D LR F + + DA+++ +D G+SR F F+ FRT ++A+ A++
Sbjct: 221 KIYAGNLGWGVRADALRAAFEGQPGLLDARVIFERDSGRSRGFGFVSFRTAEDAQAALEA 280
Query: 61 FNKSYLDTCRISCEIARK---VGDPN 83
+ L+ + +A + G P+
Sbjct: 281 LDGVELEGRPLRLSMAEQNPTAGSPS 306
>gi|6754972|ref|NP_035163.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
gi|473092|emb|CAA53572.1| polyA binding protein, testis-enriched isoform [Mus musculus]
gi|29835142|gb|AAH51134.1| Poly(A) binding protein, cytoplasmic 2 [Mus musculus]
gi|148678113|gb|EDL10060.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
Length = 628
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 176/434 (40%), Gaps = 72/434 (16%)
Query: 280 DPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRS 339
DPG P +S L+V +L TE L E FS G + + + D T+RS
Sbjct: 5 DPGCPMAS-------------LYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRS 51
Query: 340 KGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQG-TKTLK 398
G A V + P A RA++ ++ + +G+ + +M ++ S + + N + KT+
Sbjct: 52 LGYASVNFEQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTID 111
Query: 399 QRREEERKASEASGNTKAWNSLFMRPDTVV--ENIARKHGVSKSDLLDREANDLAVRIAL 456
+ + A GN + VV EN ++ HG + E + A R
Sbjct: 112 NKALYD--TFSAFGNILSCK--------VVSDENGSKGHG-----FVHFETEEAAERAIE 156
Query: 457 GETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFG 516
++ +K S +E A G K +V+ +KN + L +FG
Sbjct: 157 KMNGMLLNDRKVFVG---RFKSQKEREAELGTGTKEFTNVY-IKNFGDRMDDETLNGLFG 212
Query: 517 KFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLS 571
+FG + V + + +K V F +A A + K G +Y+
Sbjct: 213 RFGQILSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYV--------- 263
Query: 572 QSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVT-DADIDPDRVESRSLFVKNLNFKTCDE 630
+ +K+D + L+ + E VT D I R + +L+VKNL+ DE
Sbjct: 264 ----GRAQKKDD--------RHTELKHKFEQVTQDKSI---RYQGINLYVKNLDDGIDDE 308
Query: 631 NLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGH 690
L+K F G I S KV + G+ S GFGF+ F S E AT ++ G I+
Sbjct: 309 RLQKEFSPF---GTITSTKVMT--EGGR--SKGFGFVCFSSPEEATKAVSEMNGRIVATK 361
Query: 691 ALILQLCHAKKDEQ 704
L + L K++ Q
Sbjct: 362 PLYVALAQRKEERQ 375
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ VKNL + ++RL+ FS G IT K+M T+ G+S+ F F+ F + +EA +A+ N
Sbjct: 296 LYVKNLDDGIDDERLQKEFSPFGTITSTKVM-TEGGRSKGFGFVCFSSPEEATKAVSEMN 354
Query: 63 KSYLDTCRISCEIARK 78
+ T + +A++
Sbjct: 355 GRIVATKPLYVALAQR 370
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 15/128 (11%)
Query: 605 DADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGF 664
+A++ E ++++KN + DE L FG + G+ILSVKV + GK S GF
Sbjct: 180 EAELGTGTKEFTNVYIKNFGDRMDDETLNGLFG---RFGQILSVKVMTD-EGGK--SKGF 233
Query: 665 GFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD---------EQVVKKAEKDKSS 715
GF+ F+ E A ++ G L+G + + K D EQV +
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKDDRHTELKHKFEQVTQDKSIRYQG 293
Query: 716 TKLLVRNV 723
L V+N+
Sbjct: 294 INLYVKNL 301
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KN + ++ L F + G+I K+M + GKS+ F F+ F ++A++A+
Sbjct: 191 TNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDE 250
Query: 61 FNKSYLDTCRISCEIARK 78
N L+ I A+K
Sbjct: 251 MNGKELNGKHIYVGRAQK 268
>gi|322711381|gb|EFZ02954.1| putative rrm-type rna binding protein [Metarhizium anisopliae ARSEF
23]
Length = 196
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P
Sbjct: 67 KESVDARSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 126
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ +L+ S+F+GR + V P R
Sbjct: 127 VAQAL-ILNESVFKGRNIKVTPKR 149
>gi|452984683|gb|EME84440.1| hypothetical protein MYCFIDRAFT_122613, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 185
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E ++S +FV N+ Y A+ +E++ HF G+++ V I++DK T KG AYV ++ P
Sbjct: 63 KEDIDSRSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNL 122
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V+P R
Sbjct: 123 VTQAL-VLNESVFRGRNIKVVPKR 145
>gi|356537206|ref|XP_003537120.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 298
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+S RLFV NLPY+ +L + F + GNV V IV D RS+G A+V E A RA
Sbjct: 86 QSSRLFVGNLPYSLLSSQLAQRFGEAGNVVSVEIVYDDIMDRSRGFAFVTMGSMEDAERA 145
Query: 357 IEVLDNSIFQGRLLHV----MPARHKK 379
I + D S GR++ V +P R K+
Sbjct: 146 IRMFDGSEIGGRIMKVNFTAIPKRGKR 172
>gi|374812290|ref|ZP_09716027.1| RNP-1 like RNA-binding protein [Treponema primitia ZAS-1]
Length = 99
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L+V NL Y TED LR FS+FG+V+ I+ D++T SKG ++ E AS AI
Sbjct: 4 KLYVGNLSYNTTEDGLRNLFSEFGSVASSKIIFDRETGNSKGFGFIEMGTDEEASAAIAG 63
Query: 360 LDNSIFQGRLLHVMPARHKKSSDK 383
+ F GR L V A K D+
Sbjct: 64 TNGREFDGRQLRVNEAMDKPRRDR 87
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKY 60
++ V NL TED LR+ FS+ G + +K++ ++ G S+ F FI T++EA AI
Sbjct: 4 KLYVGNLSYNTTEDGLRNLFSEFGSVASSKIIFDRETGNSKGFGFIEMGTDEEASAAIAG 63
Query: 61 FNKSYLD 67
N D
Sbjct: 64 TNGREFD 70
>gi|258565691|ref|XP_002583590.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
gi|237907291|gb|EEP81692.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
Length = 765
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 154/392 (39%), Gaps = 84/392 (21%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
PSS++ Q S L+V L + TE L E FS G V+ + + D T+RS G A
Sbjct: 42 PSSTTATAQPH---SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYA 98
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHKKSS------------DKQEL 386
YV Y RA+E L+ ++ +GR +M PA K D + L
Sbjct: 99 YVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKAL 158
Query: 387 HNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE 446
H++ + L + A + GN+K + + +N A KH LL+ +
Sbjct: 159 HDTFAAFGNILSC-----KVAQDEFGNSKGYGFVHYETAEAAQN-AIKH--VNGMLLNDK 210
Query: 447 ANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDS 506
+ IA + Q S EE A T+ VKN+ D+
Sbjct: 211 KVFVGHHIAKKDRQ----------------SKFEEMKANFTN--------VYVKNIDQDT 246
Query: 507 SEGELAKMFGKFGSLDKVILP------STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPL 560
++ E ++F KFG + L ++ V F AAAA L K +K L
Sbjct: 247 TDEEFRELFEKFGEITSATLARDSESGKSRGFGFVNFTSHESAAAAVDNLNEKDFKSQKL 306
Query: 561 YLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFV 620
Y+ A K +++ + + +++A R + +GV +L++
Sbjct: 307 YVGRA----------QKKHEREEELRKQYEAARIEKASKYQGV-------------NLYI 343
Query: 621 KNLNFKTCDENLRKHFGEHIKEGRILSVKVKK 652
KNL+ DE LR F + G I S KV +
Sbjct: 344 KNLSDDIDDEKLRDLFSGY---GTITSAKVMR 372
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR-TKDGKSRQFAFIGFRTEQEAEEAIK 59
+ + VKN+ + T++ R+ F + GEIT A L R ++ GKSR F F+ F + + A A+
Sbjct: 235 TNVYVKNIDQDTTDEEFRELFEKFGEITSATLARDSESGKSRGFGFVNFTSHESAAAAVD 294
Query: 60 YFNKSYLDTCRISCEIARK 78
N+ + ++ A+K
Sbjct: 295 NLNEKDFKSQKLYVGRAQK 313
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKK-HLKNGKNVSMGFGFIEFDSVETA 675
++F+KNL+ ++ L F G ILS KV + N K G+GF+ +++ E A
Sbjct: 143 NVFIKNLDTAIDNKALHDTFAAF---GNILSCKVAQDEFGNSK----GYGFVHYETAEAA 195
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
N + + G +L+ + + AKKD Q K E + T + V+N+
Sbjct: 196 QNAIKHVNGMLLNDKKVFVGHHIAKKDRQ-SKFEEMKANFTNVYVKNI 242
>gi|194211851|ref|XP_001914735.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Equus caballus]
Length = 217
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 47/70 (67%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++ T ++L FSK+G V +V I+ DKDT+RSKG+A++L+ +SA +
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQNCTRAI 71
Query: 361 DNSIFQGRLL 370
+N GR++
Sbjct: 72 NNKQLFGRVI 81
>gi|170076900|ref|YP_001733538.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169884569|gb|ACA98282.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 84
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y ED+LRE F+ +G V V++ VD++T+R +G +V + E +AIE L
Sbjct: 3 IYVGNLDYAVEEDDLREVFNDYGKVKRVYLPVDRETQRKRGFGFVEMSNDEEEDKAIEAL 62
Query: 361 DNSIFQGRLLHVMPARHKKSS 381
D + + GR + V AR + +S
Sbjct: 63 DGASWMGRDMKVNKARPRTNS 83
>gi|426232956|ref|XP_004010483.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Ovis aries]
Length = 217
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 47/70 (67%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++ T ++L FSK+G V +V I+ DKDT+RSKG+A++L+ +SA +
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQNCTRAI 71
Query: 361 DNSIFQGRLL 370
+N GR++
Sbjct: 72 NNKQLFGRVI 81
>gi|70778746|ref|NP_001020489.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Bos taurus]
gi|426224667|ref|XP_004006490.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Ovis aries]
gi|426247121|ref|XP_004017335.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Ovis aries]
gi|75069805|sp|Q56JZ7.1|ZCRB1_BOVIN RecName: Full=Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; AltName: Full=U11/U12 small
nuclear ribonucleoprotein 31 kDa protein; Short=U11/U12
snRNP 31 kDa protein
gi|58760376|gb|AAW82098.1| MADP-1 protein-like [Bos taurus]
gi|296487721|tpg|DAA29834.1| TPA: zinc finger CCHC-type and RNA-binding motif-containing protein
1 [Bos taurus]
Length = 217
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 47/70 (67%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++ T ++L FSK+G V +V I+ DKDT+RSKG+A++L+ +SA +
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQNCTRAI 71
Query: 361 DNSIFQGRLL 370
+N GR++
Sbjct: 72 NNKQLFGRVI 81
>gi|296273514|ref|YP_003656145.1| RNP-1 like RNA-binding protein [Arcobacter nitrofigilis DSM 7299]
gi|296097688|gb|ADG93638.1| RNP-1 like RNA-binding protein [Arcobacter nitrofigilis DSM 7299]
Length = 92
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+++V N+ Y TE+ L FS++G VS V ++ D+DT R+KG +V +A +AIE
Sbjct: 2 QIYVGNMSYGTTEEGLTTLFSQYGEVSSVKLITDRDTGRAKGFGFVAMNDDSAALKAIEE 61
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHN 388
L+ + GR L + A+ K+ ++E +N
Sbjct: 62 LNGKEYDGRTLRINEAKPKEEKPRREFNN 90
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKY 60
+I V N+ TE+ L FSQ GE++ KL+ +D G+++ F F+ + A +AI+
Sbjct: 2 QIYVGNMSYGTTEEGLTTLFSQYGEVSSVKLITDRDTGRAKGFGFVAMNDDSAALKAIEE 61
Query: 61 FNKSYLD--TCRIS 72
N D T RI+
Sbjct: 62 LNGKEYDGRTLRIN 75
>gi|126310751|ref|XP_001371554.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Monodelphis domestica]
Length = 217
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++ T ++L FSK+G V +V I+ DKDT++SKG+A++L+ ESA L
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 361 DNSIFQGRLL 370
+N GR++
Sbjct: 72 NNKQLFGRVI 81
>gi|169604234|ref|XP_001795538.1| hypothetical protein SNOG_05129 [Phaeosphaeria nodorum SN15]
gi|111066400|gb|EAT87520.1| hypothetical protein SNOG_05129 [Phaeosphaeria nodorum SN15]
Length = 214
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+FV N+ Y A+ +E++ HF G+++ V I++DK T KG AYV + P + A+ VL
Sbjct: 71 VFVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKGYAYVEFTEPSLVNEAL-VL 129
Query: 361 DNSIFQGRLLHVMPAR 376
DNS+F+ R L V+P R
Sbjct: 130 DNSVFRSRNLKVVPKR 145
>gi|390601291|gb|EIN10685.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 194
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V N+ Y AT +E++ HF G ++ V I+ DK T KG AYV ++ PE A+ L
Sbjct: 71 VYVGNVDYGATPEEIQAHFQACGVINRVTILCDKFTGHPKGYAYVEFSEPEHVDAAV-AL 129
Query: 361 DNSIFQGRLLHVMPAR 376
DNS+F+GRLL V R
Sbjct: 130 DNSLFRGRLLKVTAKR 145
>gi|72062514|ref|XP_796219.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Strongylocentrotus purpuratus]
Length = 233
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 50/72 (69%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP+T T ++L++ F +FG V+ V IV DK+T++SKG+A+VL+ +SA ++I+ L
Sbjct: 12 VYVSNLPFTLTNNDLQQIFGRFGQVARVTIVKDKETRKSKGLAFVLFVERDSAYKSIKSL 71
Query: 361 DNSIFQGRLLHV 372
+ GR V
Sbjct: 72 NGRELFGRKWKV 83
>gi|425448844|ref|ZP_18828688.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC 7941]
gi|389767705|emb|CCI06977.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC 7941]
Length = 97
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+FV NL Y ++D+L E F ++GNV VHI VDK+T R +G A+V + AIE L
Sbjct: 3 IFVGNLSYDISQDDLVEVFKEYGNVQRVHIPVDKETGRKRGFAFVEMENKAQETTAIEAL 62
Query: 361 DNSIFQGRLLHVMPARHKK 379
D + + GR + V AR ++
Sbjct: 63 DGAEWMGRSIKVNEARDRE 81
>gi|420450495|ref|ZP_14949355.1| RNA binding protein [Helicobacter pylori Hp H-45]
gi|393067028|gb|EJB67842.1| RNA binding protein [Helicobacter pylori Hp H-45]
Length = 82
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+AT ++++E FS+FG V V ++ D++TK+ KG +V ES AI L
Sbjct: 4 IYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQ-EESVREAIAKL 62
Query: 361 DNSIFQGRLLHVMPARHKKS 380
DN+ F GR + V A KKS
Sbjct: 63 DNTDFMGRTIRVTEANPKKS 82
>gi|392592926|gb|EIW82252.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 197
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
++ +S ++V N+ Y AT +E++ HF G ++ V I+ DK T KG AYV +A P+
Sbjct: 77 KQAADSRSVYVGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGFAYVEFAEPDF 136
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
A+ +DNS+F+GRL+ V R
Sbjct: 137 IDAAL-AMDNSLFRGRLIKVTAKR 159
>gi|327272940|ref|XP_003221242.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Anolis carolinensis]
Length = 216
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++ T ++L FSK+G V +V I+ DKDT++SKG+A++L+ ESA L
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 361 DNSIFQGRLL 370
+N GR++
Sbjct: 72 NNKQLFGRVI 81
>gi|320587701|gb|EFX00176.1| ribosome biogenesis protein [Grosmannia clavigera kw1407]
Length = 822
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
P+++ + V E +FVR+LP TAT ++L E FS+ V +V D TK S+G
Sbjct: 31 PTTAPPSKKARVEERRSVFVRSLPSTATSEKLTEFFSEHFPVKHATVVTDPKTKESRGYG 90
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLH--VMPARHK 378
+V + E A A E LDN +F GR L + RH+
Sbjct: 91 FVTFTDAEDAKAAKEKLDNGLFDGRRLRLDIAEPRHR 127
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
LF+RNLP+T +++ L+ HFS+FG V IV+D+ T R G +V +
Sbjct: 377 LFIRNLPFTTSDEALKTHFSQFGAVRYARIVMDRATDRPAGTGFVCF 423
>gi|452822647|gb|EME29664.1| RNA-binding protein [Galdieria sulphuraria]
Length = 187
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%)
Query: 274 ANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD 333
AN + +D G+ + S +FV NLP+ TE +L F ++G++++VH+V D
Sbjct: 10 ANEKELDLGHIGGYGSSWHDKYSHSSYIFVGNLPFELTEGDLLVVFEQYGHIADVHLVRD 69
Query: 334 KDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKK 379
+DT +SKG A++ Y S A++ + ++ GR L V H K
Sbjct: 70 QDTGKSKGFAFIGYEDQRSTILAVDNFNGTVLLGRTLRVDHVAHYK 115
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S I V NLP +TE L F Q G I D L+R +D GKS+ FAFIG+ ++ A+
Sbjct: 35 SYIFVGNLPFELTEGDLLVVFEQYGHIADVHLVRDQDTGKSKGFAFIGYEDQRSTILAVD 94
Query: 60 YFNKSYL 66
FN + L
Sbjct: 95 NFNGTVL 101
>gi|367026828|ref|XP_003662698.1| hypothetical protein MYCTH_2303648 [Myceliophthora thermophila ATCC
42464]
gi|347009967|gb|AEO57453.1| hypothetical protein MYCTH_2303648 [Myceliophthora thermophila ATCC
42464]
Length = 802
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 267 SGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGR-LFVRNLPYTATEDELREHFSKFGNV 325
+G GE A P PS ++ L+S R LFVR+LP AT + L E FS+ V
Sbjct: 17 AGPGESAAQ----TPDPPSKKAR------LDSHRQLFVRSLPPDATSESLVEFFSQHYPV 66
Query: 326 SEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
+V+D TK S+G +V +A PE A+ A E L N +F GR L +
Sbjct: 67 KHATVVLDPKTKTSRGYGFVSFADPEDAAEAKEKLKNELFHGRRLQL 113
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
+F+RNLPY+ T++ L+ HF++FG V +V+D+ T++ G +V +
Sbjct: 366 IFIRNLPYSTTDETLKAHFTRFGRVRYARVVMDRTTEKPAGTGFVCF 412
>gi|322694379|gb|EFY86210.1| putative rrm-type rna binding protein [Metarhizium acridum CQMa
102]
Length = 196
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P
Sbjct: 67 KESVDARSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 126
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ +L+ S+F+GR + V P R
Sbjct: 127 VAQAL-ILNESVFKGRNIKVTPKR 149
>gi|404497479|ref|YP_006721585.1| RNA-binding protein [Geobacter metallireducens GS-15]
gi|418065178|ref|ZP_12702553.1| RNP-1 like RNA-binding protein [Geobacter metallireducens RCH3]
gi|78195083|gb|ABB32850.1| RNA-binding protein [Geobacter metallireducens GS-15]
gi|373562810|gb|EHP89017.1| RNP-1 like RNA-binding protein [Geobacter metallireducens RCH3]
Length = 134
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V ++ Y ATED+LR F+ G V+ VH++ D+DT KG YV A E A A+E L
Sbjct: 7 LYVGHMSYEATEDDLRRLFTVAGTVTSVHLITDRDTGEFKGCGYVRMATIEEAKEAVETL 66
Query: 361 DNSIFQGRLLHVMPARHKKSS 381
D ++ + R + V AR +K +
Sbjct: 67 DGALLRNRAITVTLARPQKQT 87
>gi|406873754|gb|EKD23843.1| hypothetical protein ACD_81C00167G0002 [uncultured bacterium]
Length = 111
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L+V LPY+ T+D L + FS+ G V I++DK T RSKG +V A + A +AI++
Sbjct: 4 KLYVGGLPYSTTQDALNDLFSQAGTVESAMIIIDKMTGRSKGFGFVEMASDDEAEKAIDM 63
Query: 360 LDNSIFQGRLLHVMPAR 376
+ F+GR L V AR
Sbjct: 64 FNGKDFEGRSLTVNVAR 80
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKY 60
++ V LP T+D L D FSQ G + A ++ K G+S+ F F+ ++ EAE+AI
Sbjct: 4 KLYVGGLPYSTTQDALNDLFSQAGTVESAMIIIDKMTGRSKGFGFVEMASDDEAEKAIDM 63
Query: 61 FNKSYLDTCRISCEIARKV 79
FN + ++ +AR +
Sbjct: 64 FNGKDFEGRSLTVNVARPM 82
>gi|223938363|ref|ZP_03630257.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223892932|gb|EEF59399.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 127
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 53/82 (64%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S +L+V NLP+TATE+EL++ F++ G V+ V +++DK + R +G +V E A A+
Sbjct: 2 STKLYVGNLPFTATENELQDMFAQHGPVTSVDLIMDKFSGRPRGFGFVTMETQEGAQAAV 61
Query: 358 EVLDNSIFQGRLLHVMPARHKK 379
+ L+ + F GR L V AR ++
Sbjct: 62 QALNGTDFGGRPLTVNEARPRE 83
Score = 45.8 bits (107), Expect = 0.091, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIK 59
+++ V NLP TE+ L+D F+Q G +T L+ K G+ R F F+ T++ A+ A++
Sbjct: 3 TKLYVGNLPFTATENELQDMFAQHGPVTSVDLIMDKFSGRPRGFGFVTMETQEGAQAAVQ 62
Query: 60 YFN 62
N
Sbjct: 63 ALN 65
>gi|395538109|ref|XP_003771028.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Sarcophilus harrisii]
Length = 217
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++ T ++L FSK+G V +V I+ DKDT++SKG+A++L+ ESA L
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 361 DNSIFQGRLL 370
+N GR++
Sbjct: 72 NNKQLFGRVI 81
>gi|302912552|ref|XP_003050726.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
gi|256731664|gb|EEU45013.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
Length = 167
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P
Sbjct: 37 KESIDARSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 96
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V P R
Sbjct: 97 VAQAL-VLNESVFKGRNIKVTPKR 119
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
+ G+LFV L + TE L E FSK+GN+S+ +++D++T R +G +V Y PE A A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 357 IEVLDNSIFQGRLLHVMPA 375
++ ++ GR + V A
Sbjct: 63 MDAMNGQSLDGRTIRVNEA 81
>gi|18399701|ref|NP_565513.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|4567275|gb|AAD23688.1| expressed protein [Arabidopsis thaliana]
gi|16604631|gb|AAL24108.1| unknown protein [Arabidopsis thaliana]
gi|27754736|gb|AAO22811.1| unknown protein [Arabidopsis thaliana]
gi|330252084|gb|AEC07178.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 1003
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LF+RNLP+ T++E+++ F+ FG V + +V+ K TKR +G A+V + +++ AI
Sbjct: 563 LFIRNLPFDVTKEEVKQRFTVFGEVESLSLVLHKVTKRPEGTAFVKFKTADASVAAISAA 622
Query: 361 DNS-----IFQGRLLHVMPARHKKSSDKQEL 386
D + + +GR L+VM A KK++ EL
Sbjct: 623 DTASGVGVLLKGRQLNVMRAVGKKAAKDIEL 653
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V LPY+ T +L E FS+ G V +V +K + +G A+V +A+ E +RAIE+
Sbjct: 22 VCVSGLPYSITNAQLEEAFSEVGPVRRCFLVTNKGSDEHRGFAFVKFALQEDVNRAIELK 81
Query: 361 DNSIFQGRLLHVMPARHKKS 380
+ S GR + V A H+ S
Sbjct: 82 NGSTVGGRRITVKQAAHRPS 101
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L +RNLP+ A +++ FS G V +V I + +T KG A+V + + A+ AI+
Sbjct: 332 KLIIRNLPFQAKPSDIKVVFSAVGFVWDVFIPKNFETGLPKGFAFVKFTCKKDAANAIKK 391
Query: 360 LDNSIFQGRLLHV 372
+ +F R + V
Sbjct: 392 FNGHMFGKRPIAV 404
>gi|168034546|ref|XP_001769773.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678882|gb|EDQ65335.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 291 VQQEVLESGRLFV-RNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAI 349
V Q ++ S +LF+ L + E+ LR+ FS FG V+EV I++D+DT RS+G +V +
Sbjct: 37 VVQRMMSSSKLFIGAGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTS 96
Query: 350 PESASRAIEVLDNSIFQGRLLHVMPARHK 378
PE A A++ +D GR + V A K
Sbjct: 97 PEEAEVALQEMDGRELAGRQIRVDYATDK 125
Score = 42.4 bits (98), Expect = 1.0, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 14 EDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
E+ LRD FS G +T+ K++ +D G+SR F F+ F + +EAE A++
Sbjct: 59 ENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQ 105
>gi|126339500|ref|XP_001362144.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Monodelphis domestica]
Length = 217
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++ T ++L FSK+G V +V I+ DKDT++SKG+A++L+ ESA L
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 361 DNSIFQGRLL 370
+N GR++
Sbjct: 72 NNKQLFGRVI 81
>gi|303315989|ref|XP_003067999.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240107675|gb|EER25854.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
Length = 117
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+LF+ L + T++ LR+ FSKFG++ E +V D+DT RS+G +V +A A A+
Sbjct: 3 KLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMNE 62
Query: 360 LDNSIFQGRLLHVMPARHKKSSDKQELHN 388
++N F GR + V A + S + + N
Sbjct: 63 MNNQEFDGRTIRVDKAADRPSGPRNDGFN 91
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIK 59
S++ + L + T++ LR FS+ G I +A +++ +D +SR F F+ F +E EAE A+
Sbjct: 2 SKLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMN 61
Query: 60 YFNKSYLDTCRISCEIARKVGD-PNMPR 86
N D I + K D P+ PR
Sbjct: 62 EMNNQEFDGRTIRVD---KAADRPSGPR 86
>gi|258568696|ref|XP_002585092.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
gi|237906538|gb|EEP80939.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
Length = 194
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T KG AYV ++ P
Sbjct: 60 KEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSL 119
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V+P R
Sbjct: 120 VAQAL-VLNESVFRGRNLKVVPKR 142
>gi|50728210|ref|XP_416034.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Gallus gallus]
Length = 216
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP+ T ++L FSK+G V +V I+ DKDT++SKG+A++L+ ESA L
Sbjct: 12 VYVSNLPFALTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 361 DNSIFQGRLL 370
+N GR++
Sbjct: 72 NNKQLFGRVI 81
>gi|449272006|gb|EMC82136.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Columba livia]
Length = 216
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP+ T ++L FSK+G V +V I+ DKDT++SKG+A++L+ ESA L
Sbjct: 12 VYVSNLPFALTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 361 DNSIFQGRLL 370
+N GR++
Sbjct: 72 NNKQLFGRVI 81
>gi|406867457|gb|EKD20495.1| 4 family polyadenylate binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 785
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 115/513 (22%), Positives = 196/513 (38%), Gaps = 115/513 (22%)
Query: 253 SNEECDSIIKDSIHSGVGEEDANG------------EIVDPGNPSSSSKDVQQEVLESGR 300
+N D + D ++ + DANG E D P+ SS + S
Sbjct: 6 TNTAVDQLASDLNNASLNGGDANGAPAINTAVPATSEDPDTAGPTPSSAAPHPQA--SAS 63
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V L + TE L E FS+ G+V+ + + D T+RS G AYV Y +A+E L
Sbjct: 64 LYVGELDSSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTIDGEKALEEL 123
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ ++ +GR +M S + T QG +K + + + KA +
Sbjct: 124 NYTLIKGRPCRIM------WSQRDPALRKTGQGNVFIKNL--------DTAIDNKALHDT 169
Query: 421 FMRPDTVVE-NIAR-KHGVSKS-DLLDREANDLAVRIALGETQVIAETKKALTNAGV--- 474
F ++ +A+ + G SK + E ++ A + ++ KK +
Sbjct: 170 FAAFGNILSCKVAQDETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVFVGHHIPKK 229
Query: 475 -NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP------ 527
S EE A T+ VKN+P ++++ E ++F KFG + L
Sbjct: 230 DRQSKFEEMKANFTN--------IYVKNIPVEATDEEFRELFEKFGDVTSASLARDTDSN 281
Query: 528 STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVG 587
++ V F+ AA A L K +KG LY+ A K +++ + +
Sbjct: 282 KSRGFGFVNFINHEHAAKAVDELNGKDFKGQDLYVGRA----------QKKHEREEELRK 331
Query: 588 EHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILS 647
++A R + +GV +L+VKNL+ D+ LR+ F G I S
Sbjct: 332 SYEAARIEKASKYQGV-------------NLYVKNLDDDVDDDKLRELFTPF---GSITS 375
Query: 648 VKVKK----------------------HLKNGKNV------------------SMGFGFI 667
KV + ++K G+ S GFGF+
Sbjct: 376 AKVMRDTPAETAEAEEKEKKDSEKNKENIKEGETAEAENTEDKPKSEKRTVGKSKGFGFV 435
Query: 668 EFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
F++ E A+ D+ +++ L + L K
Sbjct: 436 CFNNPEEASKAVTDMNQRMVNNKPLYVALAQRK 468
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDG-KSRQFAFIGFRTEQEAEEAIK 59
+ I VKN+P T++ R+ F + G++T A L R D KSR F F+ F + A +A+
Sbjct: 243 TNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDTDSNKSRGFGFVNFINHEHAAKAVD 302
Query: 60 YFN 62
N
Sbjct: 303 ELN 305
Score = 42.4 bits (98), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
++F+KNL+ ++ L F G ILS KV + + S G+GF+ +++ E A+
Sbjct: 151 NVFIKNLDTAIDNKALHDTFAAF---GNILSCKVAQ---DETGASKGYGFVHYETDEAAS 204
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNVAFEA 727
+ + G +L+ + + KKD Q K E + T + V+N+ EA
Sbjct: 205 QAIKHVNGMLLNEKKVFVGHHIPKKDRQ-SKFEEMKANFTNIYVKNIPVEA 254
>gi|326911410|ref|XP_003202052.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Meleagris gallopavo]
Length = 216
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP+ T ++L FSK+G V +V I+ DKDT++SKG+A++L+ ESA L
Sbjct: 12 VYVSNLPFALTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 361 DNSIFQGRLL 370
+N GR++
Sbjct: 72 NNKQLFGRVI 81
>gi|395330550|gb|EJF62933.1| RNA-binding domain-containing protein, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 168
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V N+ Y+AT +E+++HF G ++ V I+ DK T KG AYV +A PE A+ +
Sbjct: 55 IYVGNVDYSATPEEIQQHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPEFIDAAL-AM 113
Query: 361 DNSIFQGRLLHVMPAR 376
DNS+F+GRL+ V P R
Sbjct: 114 DNSLFRGRLIKVTPKR 129
>gi|224093656|ref|XP_002196012.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Taeniopygia guttata]
Length = 216
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP+ T ++L FSK+G V +V I+ DKDT++SKG+A++L+ ESA L
Sbjct: 12 VYVSNLPFALTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 361 DNSIFQGRLL 370
+N GR++
Sbjct: 72 NNKQLFGRVI 81
>gi|302697041|ref|XP_003038199.1| hypothetical protein SCHCODRAFT_80477 [Schizophyllum commune H4-8]
gi|300111896|gb|EFJ03297.1| hypothetical protein SCHCODRAFT_80477 [Schizophyllum commune H4-8]
Length = 344
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V N+ Y+AT ++++ HF G ++ V I+ DK T KG AYV +A PE A+ +
Sbjct: 52 IYVGNVDYSATPEDIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPEHVDAAV-TM 110
Query: 361 DNSIFQGRLLHVMPA----------RHKKSSDKQELHNSTSQGTKTLKQR 400
DNS+F+GRL+ + A RH + + L N+ + + + R
Sbjct: 111 DNSLFKGRLIKAVTAADTAGATVAIRHTQEGGEAMLSNAVKRWPRLMSTR 160
>gi|296827786|ref|XP_002851224.1| nucleolar protein 4 [Arthroderma otae CBS 113480]
gi|238838778|gb|EEQ28440.1| nucleolar protein 4 [Arthroderma otae CBS 113480]
Length = 734
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFVR+LP TAT + L E+FS+ + +V+D TK+SKG +V + E A A + L
Sbjct: 32 LFVRSLPSTATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFTDHEDAQSAAKEL 91
Query: 361 DNSIFQGRLLHVMPA--RHKKSSDKQ--ELHNSTSQGTKTLKQRREEE 404
+NS+F+G+ + + A RH++ +K+ + +S K LK++R E
Sbjct: 92 NNSVFEGKKIKIEFAEPRHREIDEKEGKSVPSSVPSKAKELKEKRRLE 139
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+F+RNLP++AT+D L EHFSKFG++ +V+D T+R KG A+V + E A+ I
Sbjct: 307 IFIRNLPFSATDDTLYEHFSKFGSLRYARVVLDPATERPKGTAFVCFYRVEDAAACI 363
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 492 RSNHVFLVKNLPYDSSEGELAKMFGKFGSLD--KVIL-PST---KTLALVVFLEPVEAAA 545
R+ ++NLP+ +++ L + F KFGSL +V+L P+T K A V F +AAA
Sbjct: 302 RNASTIFIRNLPFSATDDTLYEHFSKFGSLRYARVVLDPATERPKGTAFVCFYRVEDAAA 361
Query: 546 AFKG 549
+G
Sbjct: 362 CIRG 365
>gi|338214373|ref|YP_004658434.1| RNP-1 like RNA-binding protein [Runella slithyformis DSM 19594]
gi|336308200|gb|AEI51302.1| RNP-1 like RNA-binding protein [Runella slithyformis DSM 19594]
Length = 127
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V N+P+ A +DELRE F +FG VS I++DK T +S+G A+V + A +AI L
Sbjct: 3 IYVANVPFKANDDELRELFEEFGEVSSARIIMDKFTGKSRGFAFVEMPNDDEAKQAISQL 62
Query: 361 DNSIFQGRLLHVMPARHKK 379
++ F G++L V AR ++
Sbjct: 63 NDFDFMGKVLVVNEARPRE 81
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKYF 61
I V N+P +D LR+ F + GE++ A+++ K GKSR FAF+ + EA++AI
Sbjct: 3 IYVANVPFKANDDELRELFEEFGEVSSARIIMDKFTGKSRGFAFVEMPNDDEAKQAISQL 62
Query: 62 N 62
N
Sbjct: 63 N 63
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 51/79 (64%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL + ATE+ELR F ++G VS V+I++D++T RS+G A+V A E A AIE L
Sbjct: 57 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 116
Query: 361 DNSIFQGRLLHVMPARHKK 379
+ GR + V AR ++
Sbjct: 117 NGHEIDGRSVTVNEARPRE 135
Score = 43.1 bits (100), Expect = 0.48, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIK 59
+ I V NL TE+ LR F Q GE++ + M + G+SR FAF+ + A++AI+
Sbjct: 55 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 114
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPR 86
N +D ++ AR P PR
Sbjct: 115 NLNGHEIDGRSVTVNEAR----PREPR 137
Score = 39.7 bits (91), Expect = 5.3, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+++V NL+FK +E LR F ++ G + +V + + G+ S GF F+E E A
Sbjct: 56 NIYVGNLSFKATEEELRGAFEQY---GEVSAVNIIMDRETGR--SRGFAFVEMADAEGAK 110
Query: 677 NVCRDLQGTILDGHALIL 694
+ +L G +DG ++ +
Sbjct: 111 DAIENLNGHEIDGRSVTV 128
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 51/79 (64%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL + ATE+ELR F ++G VS V+I++D++T RS+G A+V A E A AIE L
Sbjct: 57 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 116
Query: 361 DNSIFQGRLLHVMPARHKK 379
+ GR + V AR ++
Sbjct: 117 NGHEIDGRSVTVNEARPRE 135
Score = 43.1 bits (100), Expect = 0.48, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIK 59
+ I V NL TE+ LR F Q GE++ + M + G+SR FAF+ + A++AI+
Sbjct: 55 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 114
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPR 86
N +D ++ AR P PR
Sbjct: 115 NLNGHEIDGRSVTVNEAR----PREPR 137
Score = 39.7 bits (91), Expect = 5.3, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+++V NL+FK +E LR F ++ G + +V + + G+ S GF F+E E A
Sbjct: 56 NIYVGNLSFKATEEELRGAFEQY---GEVSAVNIIMDRETGR--SRGFAFVEMADAEGAK 110
Query: 677 NVCRDLQGTILDGHALIL 694
+ +L G +DG ++ +
Sbjct: 111 DAIENLNGHEIDGRSVTV 128
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 51/79 (64%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL + ATE+ELR F ++G VS V+I++D++T RS+G A+V A E A AIE L
Sbjct: 57 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 116
Query: 361 DNSIFQGRLLHVMPARHKK 379
+ GR + V AR ++
Sbjct: 117 NGHEIDGRSVTVNEARPRE 135
Score = 43.1 bits (100), Expect = 0.48, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIK 59
+ I V NL TE+ LR F Q GE++ + M + G+SR FAF+ + A++AI+
Sbjct: 55 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 114
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPR 86
N +D ++ AR P PR
Sbjct: 115 NLNGHEIDGRSVTVNEAR----PREPR 137
Score = 39.7 bits (91), Expect = 5.3, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+++V NL+FK +E LR F ++ G + +V + + G+ S GF F+E E A
Sbjct: 56 NIYVGNLSFKATEEELRGAFEQY---GEVSAVNIIMDRETGR--SRGFAFVEMADAEGAK 110
Query: 677 NVCRDLQGTILDGHALIL 694
+ +L G +DG ++ +
Sbjct: 111 DAIENLNGHEIDGRSVTV 128
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 185/444 (41%), Gaps = 94/444 (21%)
Query: 285 SSSSKDVQQ-EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
SS+++ Q E L S L+V L + TE +L E FS G VS + + D +K+S G A
Sbjct: 34 SSTAESTQNSETLAS--LYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYA 91
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHVM-----PARHKKSS------------DKQEL 386
YV + +A+E L+ + +G+ +M P+ + S D + L
Sbjct: 92 YVNFQSHADGEKALEELNYTPIKGKACRIMWSQRDPSLRRNGSGNIFIKNLHPAIDNKTL 151
Query: 387 HNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMR----PDTVVENIARKHGVSKSDL 442
H++ S K L + A++ +GN+K + + +EN+ +G+ L
Sbjct: 152 HDTFSAFGKILSCK-----IATDENGNSKGFGFVHYEESESAKAAIENV---NGM----L 199
Query: 443 LDREANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNL 502
L+ + +A + Q S + E A T+ VKN+
Sbjct: 200 LNDHEVYVGPHLAKKDRQ----------------SKMRELIANFTN--------VYVKNI 235
Query: 503 PYDSSEGELAKMFGKFGSLDKVILPS-----TKTLALVVFLEPVEAAAAFKGLAYKRYKG 557
+ E +L + F FG++ + L ++ V F + +A A + L K G
Sbjct: 236 NLNWDEDKLRETFSPFGTISSIFLSKDESGKSRGFGFVNFEKHEDAVKAVEELNNKDIDG 295
Query: 558 VPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRS 617
LY+ A K +++ +++ +++A R ++QL ++ + +
Sbjct: 296 QKLYVGRA----------QKKSERMESLKHQYEAAR---QEQL----------NKYQGYN 332
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
LFVKNL+ D L + F + G I S KV + + S GFGF+ + S E AT
Sbjct: 333 LFVKNLDDSIDDAKLEEEFKPY---GTITSAKV---MLDDAGKSKGFGFVCYSSPEEATK 386
Query: 678 VCRDLQGTILDGHALILQLCHAKK 701
++ ++ G L + L K+
Sbjct: 387 AITEMHQRMVAGKPLYVALAQRKE 410
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFV+NL + + +L E F +G ++ +++D D +SKG +V Y+ PE A++AI +
Sbjct: 333 LFVKNLDDSIDDAKLEEEFKPYGTITSAKVMLD-DAGKSKGFGFVCYSSPEEATKAITEM 391
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKA---- 416
+ G+ L+V A+ K+ Q SQ + Q R ++ A G A
Sbjct: 392 HQRMVAGKPLYVALAQRKEVRRSQ-----LSQQIQARNQMRMQQAAAQGGMGQFVAPMFY 446
Query: 417 -WNSLFMRP 424
N F+ P
Sbjct: 447 GQNPGFLPP 455
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 609 DPD--RVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGF 666
DP R S ++F+KNL+ ++ L F G+ILS K+ +NG S GFGF
Sbjct: 126 DPSLRRNGSGNIFIKNLHPAIDNKTLHDTFSAF---GKILSCKIATD-ENGN--SKGFGF 179
Query: 667 IEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKKAEKDKSSTKLLVRNV 723
+ ++ E+A ++ G +L+ H + + AKKD Q K E + T + V+N+
Sbjct: 180 VHYEESESAKAAIENVNGMLLNDHEVYVGPHLAKKDRQ-SKMRELIANFTNVYVKNI 235
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN+ ED+LR+ FS G I+ L + + GKSR F F+ F ++A +A++
Sbjct: 228 TNVYVKNINLNWDEDKLRETFSPFGTISSIFLSKDESGKSRGFGFVNFEKHEDAVKAVEE 287
Query: 61 FNKSYLDTCRISCEIARK 78
N +D ++ A+K
Sbjct: 288 LNNKDIDGQKLYVGRAQK 305
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ VKNL + + +L + F G IT AK+M GKS+ F F+ + + +EA +AI
Sbjct: 333 LFVKNLDDSIDDAKLEEEFKPYGTITSAKVMLDDAGKSKGFGFVCYSSPEEATKAI 388
>gi|189205843|ref|XP_001939256.1| nucleolar protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187975349|gb|EDU41975.1| nucleolar protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 756
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 161/361 (44%), Gaps = 54/361 (14%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIKYF 61
+ V+ L VT + L ++FS+ I +A ++ K+ + S+ + F+ F ++A+ A +
Sbjct: 43 LFVRGLAPNVTSEDLTEYFSESYPIKNALVVLDKETRESKSYGFVTFADVEDAQRAKEEL 102
Query: 62 NKSYLDTCRISCEIA---RKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKTI 118
N + + +I + A ++ G+ PR R ++E+++ E + P L +
Sbjct: 103 NNTEIKGKKIKVDFAEARQREGEEKRPRAGDRAKAEREQQIKEAQ-TPKLIIR------- 154
Query: 119 EKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSITL 178
+ P ++ + +Q +S + + L ++ G ++L
Sbjct: 155 ------NLPWTIKTQEDLQKLFRS--YGKVNFVNLPKKPNGELR---------GFGFVSL 197
Query: 179 HVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDS-AGDDDDDD 237
K + I + E + A + D D ++S K ++ E +D++ AG +D+D
Sbjct: 198 RGKKNAERAIQELNGKEIDERPIAVDWAVDRDTWQSLQK---TEQEGDDEAKAGAEDEDK 254
Query: 238 DGEEEE----------EEENDHNGDSNEECDSIIKDSIHSGVGEEDANGEI-VDPGNPSS 286
D ++ E E + + +++ + ++ + + E+D G I +D P
Sbjct: 255 DMDDAESSVVSSDDDSEADGSDEDEEDDDDNEDDSNTDYEDISEDDEEGGIQLDDNRPKR 314
Query: 287 SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
E LFVRN+P+T ++ L+EHF +FG + +VVD++T+R KG +V
Sbjct: 315 ----------EEYTLFVRNVPFTVDDERLKEHFQQFGGIRFARVVVDRETERPKGTGFVS 364
Query: 347 Y 347
+
Sbjct: 365 F 365
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 284 PSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIA 343
PSS++ V + + +LFVR L T ++L E+FS+ + +V+DK+T+ SK
Sbjct: 26 PSSNAAKVTPKEVARRQLFVRGLAPNVTSEDLTEYFSESYPIKNALVVLDKETRESKSYG 85
Query: 344 YVLYAIPESASRAIEVLDNSIFQGRLLHV--MPARHKKSSDKQ 384
+V +A E A RA E L+N+ +G+ + V AR ++ +K+
Sbjct: 86 FVTFADVEDAQRAKEELNNTEIKGKKIKVDFAEARQREGEEKR 128
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 18/133 (13%)
Query: 606 ADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFG 665
A + P V R LFV+ L E+L ++F E L V L S +G
Sbjct: 31 AKVTPKEVARRQLFVRGLAPNVTSEDLTEYFSESYPIKNALVV-----LDKETRESKSYG 85
Query: 666 FIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVK--------KAE-----KD 712
F+ F VE A +L T + G + + A++ E K KAE K+
Sbjct: 86 FVTFADVEDAQRAKEELNNTEIKGKKIKVDFAEARQREGEEKRPRAGDRAKAEREQQIKE 145
Query: 713 KSSTKLLVRNVAF 725
+ KL++RN+ +
Sbjct: 146 AQTPKLIIRNLPW 158
>gi|407928590|gb|EKG21444.1| hypothetical protein MPH_01242 [Macrophomina phaseolina MS6]
Length = 221
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 32/189 (16%)
Query: 197 SKNAAADELMSDMDYFKSRVKKDWSDSES--EDDSAGDDDDDDDGEEEEEEENDHNGDSN 254
+ + AD L + Y+ SR +D+E E+D + DDD+ +EEE
Sbjct: 2 TPDQVADYLTTQACYYDSRTSA-MADTEPTREEDPRPEIQDDDNNDEEE----------- 49
Query: 255 EECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGR-------LFVRNLP 307
+ +K + E E+ +S D Q E L + +FV N+
Sbjct: 50 ---ITAMKKRVQEMEAEAAKLREM-------QASLDSQTETLRENKEDIDARSVFVGNVD 99
Query: 308 YTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQG 367
Y A+ +E++ HF G+++ V I++DK T KG AYV + P ++A+ VL+ S+F+G
Sbjct: 100 YGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQAL-VLNESVFRG 158
Query: 368 RLLHVMPAR 376
R + V+P R
Sbjct: 159 RNIKVVPKR 167
>gi|342887594|gb|EGU87076.1| hypothetical protein FOXB_02470 [Fusarium oxysporum Fo5176]
Length = 205
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y+A+ ++++ HF G+++ V I++DK T + KG AYV + P
Sbjct: 76 KESIDARSIFVGNVDYSASPEDIQSHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 135
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V P R
Sbjct: 136 VAQAL-VLNESVFKGRNIKVTPKR 158
>gi|296235404|ref|XP_002762884.1| PREDICTED: putative RNA-binding protein 3 [Callithrix jacchus]
Length = 159
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESLDGRQIRV 79
Score = 40.4 bits (93), Expect = 3.3, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L HF ++ VK ++ + S GFGFI F + E
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQR-----SRGFGFITFTNPE 58
Query: 674 TATNVCRDLQGTILDGHALILQLCHAKK 701
A+ R + G LDG +++ HA K
Sbjct: 59 HASVAMRAMNGESLDGRQ--IRVDHAGK 84
>gi|357441411|ref|XP_003590983.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
truncatula]
gi|355480031|gb|AES61234.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
truncatula]
Length = 962
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 134/309 (43%), Gaps = 52/309 (16%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L VRNLP+ A E+E+R+ FS G V EV I DT SKG A+V + + A AI
Sbjct: 283 KLIVRNLPFKAKENEIRDAFSSAGTVWEVFIPQKSDTGLSKGFAFVKFTCKQDAENAIRK 342
Query: 360 LDNSIFQGRLLHVMPARHKK--SSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAW 417
L+ S F RL+ V A KK SSD + S E ++K ++ G+T
Sbjct: 343 LNGSKFGSRLIAVDWAVPKKIFSSDTNDAPAS-----------EEGQQKVTDEDGSTTTE 391
Query: 418 NSLFMRP-----------DTVVE-------------NIARK--HGVSKSDLLDREANDLA 451
+ L D+VVE +IARK + + S D N+ +
Sbjct: 392 DDLENTDKKSDQGDDSDIDSVVEEDVPSEDDFDKEADIARKVLNNLITSSAKDESVNNDS 451
Query: 452 V------RIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYD 505
V + ET A++K + + V+ S E S D L R+ VF+ NLP++
Sbjct: 452 VSSEEKNKPKSKETVKGADSKTSKESDKVSDISKPETSKETEDDLHRT--VFIT-NLPFE 508
Query: 506 SSEGELAKMFGKFGSLD---KVILPSTKTLALVVFLEPVEAAAAFKGLAYKRY-KGVPLY 561
EL + F FG ++ V+ TK FL+ A AA ++ G+ +
Sbjct: 509 LDTEELKQRFSAFGEVEYFAPVLHQVTKRPRGTGFLKFKTAEAADNAISTANTASGMGIL 568
Query: 562 LEWAPSDVL 570
++ P VL
Sbjct: 569 VKGRPLKVL 577
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFV NLPY+ T +L + FS+ G V +V K + + +G YV +A+ + A++AIE+
Sbjct: 23 LFVSNLPYSFTNSQLEQTFSEVGPVRRCFMVTQKGSTQHRGFGYVQFAVEKDANQAIELK 82
Query: 361 DNSIFQGRLL---HVMP 374
++S+ R + H +P
Sbjct: 83 NSSLVGDRKIVVKHAIP 99
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 51/247 (20%)
Query: 231 GDDDDDDDGEEEEEEENDHNGDSNEECD---SIIKDSIHSGVGEEDANGEIV---DPGNP 284
GDD D D EE+ D D ++E D ++ + I S +E N + V + P
Sbjct: 404 GDDSDIDSVVEEDVPSED---DFDKEADIARKVLNNLITSSAKDESVNNDSVSSEEKNKP 460
Query: 285 SS-------------------------SSKDVQQEVLESGRLFVRNLPYTATEDELREHF 319
S +SK+ + ++ + +F+ NLP+ +EL++ F
Sbjct: 461 KSKETVKGADSKTSKESDKVSDISKPETSKETEDDLHRT--VFITNLPFELDTEELKQRF 518
Query: 320 SKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKK 379
S FG V V+ + TKR +G ++ + E+A AI + + G L+ P + K
Sbjct: 519 SAFGEVEYFAPVLHQVTKRPRGTGFLKFKTAEAADNAISTANTASGMGILVKGRPLKVLK 578
Query: 380 SSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSK 439
+ DK+ H+ +E+E++ +E + N + +++ GVS
Sbjct: 579 ALDKKSAHD------------KEQEKEKNEVQDHR---NLYLAKEGLILDGTPAAEGVSA 623
Query: 440 SDLLDRE 446
+D+ R+
Sbjct: 624 TDMSKRK 630
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKD-GKSRQFAFIGFRTEQEAEEAIKY 60
++ V+NLP E+ +RD FS G + + + + D G S+ FAF+ F +Q+AE AI+
Sbjct: 283 KLIVRNLPFKAKENEIRDAFSSAGTVWEVFIPQKSDTGLSKGFAFVKFTCKQDAENAIRK 342
Query: 61 FNKSYLDTCRISCEIA 76
N S + I+ + A
Sbjct: 343 LNGSKFGSRLIAVDWA 358
>gi|418530958|ref|ZP_13096878.1| RNA recognition motif-containing protein [Comamonas testosteroni
ATCC 11996]
gi|371452037|gb|EHN65069.1| RNA recognition motif-containing protein [Comamonas testosteroni
ATCC 11996]
Length = 83
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V NL YT D LR HF G+V I++D++T RS+G +V E A +AIE L
Sbjct: 5 LYVTNLSYTVDSDALRAHFGSCGDVVAADIIMDRETGRSRGFGFVEMGTQEQAQKAIETL 64
Query: 361 DNSIFQGRLLHVMPARHKK 379
++ GR L V AR +K
Sbjct: 65 NDQPLGGRALGVALARPRK 83
Score = 40.4 bits (93), Expect = 3.7, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIK 59
S + V NL V D LR F G++ A + M + G+SR F F+ T+++A++AI+
Sbjct: 3 SNLYVTNLSYTVDSDALRAHFGSCGDVVAADIIMDRETGRSRGFGFVEMGTQEQAQKAIE 62
Query: 60 YFNKSYLDTCRISCEIAR 77
N L + +AR
Sbjct: 63 TLNDQPLGGRALGVALAR 80
>gi|149244924|ref|XP_001527005.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449399|gb|EDK43655.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 795
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 27/166 (16%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E+ +FVRN+PY A E L+EHF FG V V+DK+T ++G A+V + ++ +
Sbjct: 358 EAFSIFVRNIPYDADESSLKEHFESFGPVKYALPVIDKETGLARGSAFVAFKTAKAYTEC 417
Query: 357 IE----------------VLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQR 400
+E V ++QGR+L ++ A ++S+DK NS +
Sbjct: 418 LENAPSNTGSTSMLIADDVSPQYVYQGRILSIVSAVDRQSADKLAERNSL---------K 468
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDRE 446
R+EE + A + + N + + E+ +SK+D+ RE
Sbjct: 469 RKEEFGKAPAEKDKR--NLYLLNEGRITEHSKLAQFISKTDMELRE 512
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 267 SGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVS 326
SGV E + ++ P +K V + L+ LFVR +P AT D+L E FS+F V
Sbjct: 16 SGVIPESSTSQVAKP------AKQVNDDGLDHRTLFVRAIPSEATSDQLSEFFSQFVPVK 69
Query: 327 EVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDK 383
IV D D K+S+G +V + + A+ + F + L V A+ + +K
Sbjct: 70 HAVIVTD-DQKQSRGFGFVSFTEDDDTLTALVESRKTKFMDKFLRVDIAKRRDRKEK 125
>gi|119184697|ref|XP_001243223.1| hypothetical protein CIMG_07119 [Coccidioides immitis RS]
gi|392866108|gb|EAS28718.2| polyadenylate-binding protein 2 [Coccidioides immitis RS]
Length = 196
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T KG AYV ++ P
Sbjct: 60 KEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSL 119
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V+P R
Sbjct: 120 VAQAL-VLNESLFRGRNLKVVPKR 142
>gi|296425243|ref|XP_002842152.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638411|emb|CAZ86343.1| unnamed protein product [Tuber melanosporum]
Length = 190
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T KG AYV + P
Sbjct: 59 KEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSL 118
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V+P R
Sbjct: 119 VAQAL-VLNESVFRGRSLKVVPKR 141
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 285 SSSSKDVQQEV--LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
S S+ + Q + + S +LF+ L Y+ + LRE F K+G V E ++VD++T RS+G
Sbjct: 24 SVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGF 83
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS 381
+V + E AS AI+ LD GR + V A + S
Sbjct: 84 GFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRARS 122
Score = 38.9 bits (89), Expect = 8.9, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 613 VESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSV 672
+ S LF+ L++ T D +LR+ F K G ++ +V + G+ S GFGF+ F S
Sbjct: 37 MSSSKLFIGGLSYSTDDTSLREAFH---KYGEVIEARVIVDRETGR--SRGFGFVTFTSS 91
Query: 673 ETATNVCRDLQGTILDG 689
E A++ + L G L G
Sbjct: 92 EEASSAIQALDGQDLHG 108
>gi|358391874|gb|EHK41278.1| hypothetical protein TRIATDRAFT_169914, partial [Trichoderma
atroviride IMI 206040]
Length = 167
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P
Sbjct: 38 KESVDARSIFVGNVDYSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 97
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V P R
Sbjct: 98 VAQAL-VLNESVFKGRNIKVTPKR 120
>gi|340520405|gb|EGR50641.1| predicted protein [Trichoderma reesei QM6a]
Length = 168
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P
Sbjct: 38 KESVDARSIFVGNVDYSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 97
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V P R
Sbjct: 98 VAQAL-VLNESVFKGRNIKVTPKR 120
>gi|336366226|gb|EGN94574.1| hypothetical protein SERLA73DRAFT_96776 [Serpula lacrymans var.
lacrymans S7.3]
Length = 889
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 109/262 (41%), Gaps = 43/262 (16%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFV NLPYTAT +L+ FS F V +V++ T SKG+ YV +AI E A A + +
Sbjct: 23 LFVSNLPYTATSTDLQTLFSDFAPVRTAFVVLEHGTGVSKGVGYVSFAIKEDAVSAFDTI 82
Query: 361 -DNSI-FQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWN 418
+N I QGR L A K DK+ K + + R S S K +
Sbjct: 83 TENGITLQGRKLRTQWA-DSKPKDKE----------KGDVVKEPKARPTSHVSHPQKVND 131
Query: 419 SLFMR------------PDTVVENIARKHGVSKSDLLDREA---NDLAVRIALGETQVIA 463
L +R T+ + I + G K D + A D + T +A
Sbjct: 132 PLAIRTIVISGLPTSIDAKTLWKKIRKHKGAEKVDWPAKTAEGDEDATSATVIFATSALA 191
Query: 464 ETKKALTNAGV------------NVSSLEEFSAGKTDG--LKRSNHVFLVKNLPYDSSEG 509
+ +A V +L A KT G RS+ +V+NLP+D +E
Sbjct: 192 QEAVNKLHAHVFKGCLLSVTLKKRQDNLATVPAKKTKGPAPNRSSR-LIVRNLPFDLTEQ 250
Query: 510 ELAKMFGKFGSLDKVILPSTKT 531
+L +F G + + +P TK+
Sbjct: 251 DLRAIFLPHGPIYSIHIPMTKS 272
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 217 KKDWSDSESEDDSAGDDDDDD----DGEEEEEEENDHNGDSNEECDSIIKDSIHSGV--- 269
K+ W + S+ + +D D D G +EE+E++D N ++ E +S D + GV
Sbjct: 338 KEKWQEEISKMEGEVEDGDVDMTSIPGRDEEDEDSDSNSENQSEDESQDDDDDNLGVHED 397
Query: 270 GEEDANGEI----VDPGNPSSSSKDVQQEVL--ESGR-LFVRNLPYTATEDELREHFSKF 322
GE+ +N E V+ G + + V+ ++ ESG LFVRN+P+ A EDELR F F
Sbjct: 398 GEDSSNSEFSDGEVEDGGEAQDQEPVKPQLPPPESGTTLFVRNVPFEADEDELRTLFRTF 457
Query: 323 GNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLD 361
G + I VD +T RS+G + + A + +E D
Sbjct: 458 GPLRYARITVDPETGRSRGTGFACFWNKVDADKVVEQSD 496
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ S +LFV L + E L++ FS+FGNV E I++D+++ RS+G ++ + E AS
Sbjct: 28 CMSSSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEAS 87
Query: 355 RAIEVLDNSIFQGRLLHVMPARHK 378
A+ +D QGR + V A +
Sbjct: 88 AAMTSMDGKELQGRNIRVNHANER 111
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 596 LEQQLEGVTDADIDPDRVESRS-LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL 654
L + L + P R S S LFV L+F T + L+ F E G +L ++
Sbjct: 11 LRRTLAPTCSPLLQPVRCMSSSKLFVGGLSFATDETTLKDAFSEF---GNVLEARIIIDR 67
Query: 655 KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKK 701
++G+ S GFGFI F S E A+ + G L G +++ HA +
Sbjct: 68 ESGR--SRGFGFITFTSTEEASAAMTSMDGKELQGRN--IRVNHANE 110
>gi|56388843|gb|AAH87677.1| Rbm3 protein [Rattus norvegicus]
Length = 148
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 357 IEVLDNSI 364
+ ++ +
Sbjct: 64 MRAMNGEV 71
Score = 40.0 bits (92), Expect = 4.1, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L HF G I V V K + + S GFGFI F + E
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSF---GPISEVVVVKDRETQR--SRGFGFITFTNPE 58
Query: 674 TATNVCRDLQGTI 686
A++ R + G +
Sbjct: 59 HASDAMRAMNGEV 71
>gi|354568550|ref|ZP_08987714.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353540273|gb|EHC09750.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 106
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y E++LRE F+++G V +V + D+DT R +G A+V E RAIE L
Sbjct: 3 IYVGNLSYQVREEDLREVFAEYGTVKKVQLPTDRDTGRVRGFAFVEMQSDEEEERAIEAL 62
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQ 384
D + + GR L V AR + + Q
Sbjct: 63 DGAEWMGRDLKVNKARPRPERNSQ 86
>gi|148702008|gb|EDL33955.1| mCG116386, isoform CRA_e [Mus musculus]
Length = 179
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 29 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 88
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 89 MRAMNGESLDGRQIRV 104
Score = 41.6 bits (96), Expect = 1.4, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L HF ++ VK ++ + S GFGFI F + E
Sbjct: 29 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQR-----SRGFGFITFTNPE 83
Query: 674 TATNVCRDLQGTILDGHAL 692
A++ R + G LDG +
Sbjct: 84 HASDAMRAMNGESLDGRQI 102
>gi|443647612|ref|ZP_21129748.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
gi|159026368|emb|CAO88919.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335466|gb|ELS49937.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
Length = 97
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+FV NL Y ++++L E F +G V VHI VDKDT+R +G A+V ++AIE L
Sbjct: 3 IFVGNLSYEISQEDLVEVFQDYGKVKRVHIPVDKDTQRKRGFAFVEMEDKAQEAKAIEAL 62
Query: 361 DNSIFQGRLLHVMPARHK 378
D + + GR + V AR +
Sbjct: 63 DGADWMGRSIKVNEARER 80
>gi|348553582|ref|XP_003462605.1| PREDICTED: putative RNA-binding protein 3-like [Cavia porcellus]
Length = 159
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L ++ E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFSTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESLDGRQIRV 79
Score = 41.2 bits (95), Expect = 1.9, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L HF ++ VK ++ + S GFGFI F + E
Sbjct: 4 EEGKLFVGGLNFSTDEQALEDHFSSFGPISEVVVVKDRETQR-----SRGFGFITFTNPE 58
Query: 674 TATNVCRDLQGTILDGHAL 692
A++ R + G LDG +
Sbjct: 59 HASDAMRAMNGESLDGRQI 77
>gi|367020140|ref|XP_003659355.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
gi|347006622|gb|AEO54110.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
Length = 534
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
ES LFV NLP++A ED + + F+K V + I D+++ R KG AYV ++ E A +A
Sbjct: 399 ESDTLFVGNLPFSADEDSVSKFFNKAAKVQSLRIPTDQESGRPKGFAYVTFSSVEDAKKA 458
Query: 357 IEVLDNSIFQGRLLHVMPARHKKSS 381
E L+ S GR + + A+ + SS
Sbjct: 459 FETLNGSDLDGRPVRLDYAKPRDSS 483
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
ES +LFV NL F ++++ K F K ++ S+++ ++G+ GF ++ F SVE
Sbjct: 399 ESDTLFVGNLPFSADEDSVSKFFN---KAAKVQSLRIPTDQESGR--PKGFAYVTFSSVE 453
Query: 674 TATNVCRDLQGTILDGHALILQLCHAK 700
A L G+ LDG + L +
Sbjct: 454 DAKKAFETLNGSDLDGRPVRLDYAKPR 480
>gi|148702006|gb|EDL33953.1| mCG116386, isoform CRA_c [Mus musculus]
Length = 90
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 357 IEVLDNSIFQG 367
+ ++ +G
Sbjct: 64 MRAMNGEGVEG 74
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
LFV LNF T ++ L HF ++ VK ++ + S GFGFI F + E A++
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQR-----SRGFGFITFTNPEHASD 62
Query: 678 VCRDLQGTILDG 689
R + G ++G
Sbjct: 63 AMRAMNGEGVEG 74
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 51/79 (64%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL + ATE+ELR F ++G VS V+I++D++T RS+G A+V A E A AIE L
Sbjct: 68 IYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENL 127
Query: 361 DNSIFQGRLLHVMPARHKK 379
+ GR + V AR ++
Sbjct: 128 NGHEIDGRSVTVNEARPRE 146
Score = 43.1 bits (100), Expect = 0.54, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAIK 59
+ I V NL TE+ LR F Q GE++ + M + G+SR FAF+ + A++AI+
Sbjct: 66 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 125
Query: 60 YFNKSYLDTCRISCEIARKVGDPNMPR 86
N +D ++ AR P PR
Sbjct: 126 NLNGHEIDGRSVTVNEAR----PREPR 148
Score = 39.7 bits (91), Expect = 5.9, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+++V NL+FK +E LR F ++ G + +V + + G+ S GF F+E E A
Sbjct: 67 NIYVGNLSFKATEEELRGAFEQY---GEVSAVNIIMDRETGR--SRGFAFVEMADAEGAK 121
Query: 677 NVCRDLQGTILDGHALIL 694
+ +L G +DG ++ +
Sbjct: 122 DAIENLNGHEIDGRSVTV 139
>gi|297824993|ref|XP_002880379.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326218|gb|EFH56638.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+ V LPY+ T +L E FS+ G V +++ +K + +G A+V +A+PE +RAIE+
Sbjct: 22 VCVSGLPYSITNAQLEEAFSEVGPVRRCYLITNKGSNEHRGFAFVTFALPEDVNRAIELK 81
Query: 361 DNSIFQGRLLHVMPARHKKS 380
+ S F GR + V A ++ S
Sbjct: 82 NGSTFGGRRITVKQATNRPS 101
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 77/143 (53%), Gaps = 6/143 (4%)
Query: 250 NGDSNEECDSIIKDSIHSGVGEEDANGEIVDPGNPSS-SSKDVQQEVLESGRLFVRNLPY 308
+G++ E S +K+S V + E + G + K+ Q+ LF+RN+P+
Sbjct: 494 DGETEESDKSKLKNSSTKPVADSSGVSEPLKSGKTKEVAPKETQENEHFERTLFIRNIPF 553
Query: 309 TATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNS----- 363
T++E+++ F+ FG V + +V++K TKR +G A++ + +++ AI + +
Sbjct: 554 DVTKEEVKQKFAVFGEVESLFLVLNKVTKRPEGTAFLKFKKADASVAAISAANTASGVGV 613
Query: 364 IFQGRLLHVMPARHKKSSDKQEL 386
+ +GR L+VM A KK++ EL
Sbjct: 614 LLKGRQLNVMRAVGKKAAHDIEL 636
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L +RNLP+ A +++E FS G V +V I + +T KG A+V + + A AI++
Sbjct: 314 KLIIRNLPFQAKPSDIKEVFSAVGFVWDVFIPKNFETGLPKGFAFVKFTCKKDAENAIQM 373
Query: 360 LDNSIFQGRLLHV 372
+ +F R + V
Sbjct: 374 FNGHMFGKRPIAV 386
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKYF 61
+CV LP +T +L + FS+ G + L+ K + R FAF+ F ++ AI+
Sbjct: 22 VCVSGLPYSITNAQLEEAFSEVGPVRRCYLITNKGSNEHRGFAFVTFALPEDVNRAIELK 81
Query: 62 NKSYLDTCRISCEIA 76
N S RI+ + A
Sbjct: 82 NGSTFGGRRITVKQA 96
>gi|303320527|ref|XP_003070263.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109949|gb|EER28118.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320041356|gb|EFW23289.1| hypothetical protein CPSG_01188 [Coccidioides posadasii str.
Silveira]
Length = 196
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T KG AYV ++ P
Sbjct: 60 KEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSL 119
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V+P R
Sbjct: 120 VAQAL-VLNESLFRGRNLKVVPKR 142
>gi|396465644|ref|XP_003837430.1| similar to ribosome biogenesis (Nop4) [Leptosphaeria maculans JN3]
gi|312213988|emb|CBX93990.1| similar to ribosome biogenesis (Nop4) [Leptosphaeria maculans JN3]
Length = 759
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 162/361 (44%), Gaps = 52/361 (14%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGK-SRQFAFIGFRTEQEAEEAIKY 60
++ V+ L VT + L + FS+ I +A ++ K+ + S+ + F+ F ++A+ A +
Sbjct: 50 QLFVRGLAPTVTTEDLTNHFSESYPIKNALVVLDKETRESKGYGFVTFADVEDAQRAKEE 109
Query: 61 FNKSYLDTCRISCEIA---RKVGDPNMPRPWSRYSLKKEKEVSEDEKNPVLAAKRGEKKT 117
N S L +I ++A ++ G+ P+ R ++ +++ +D + P L +
Sbjct: 110 LNNSELKGKKIKVDVAEARQREGEEKRPKAGDRAKAERAQQI-KDAQTPKLIIR------ 162
Query: 118 IEKVTENDDPQLLEFLQVMQPRVKSKMWANDTLIGLMADQKAKVSENISQAIKGGEKSIT 177
+ P ++ + +Q +S + + L ++ G ++
Sbjct: 163 -------NLPWTVKTPEDLQKLFRS--FGKVNFVNLPKKPNGELR---------GFGFVS 204
Query: 178 LHVKSDKSNVITDSQATEKSKNAAADELMSDMDYFKSRVKKDWSDSESEDDSAGDDDDDD 237
L + + N I + E A + D D +++ K S+ E E+ +G + +D
Sbjct: 205 LRGRKNAENAIRELNGKEIDDRPIAVDWAVDRDTWQTLQK---SEQEGEETQSGTEKEDK 261
Query: 238 DGEEEEEEENDHNGDSNEECDSIIK----------DSIHSGVGEEDANGEI-VDPGNPSS 286
+ E+ E N +GD N++ ++ ++ + + E+D +G +D N
Sbjct: 262 E-MEDAESSNTSDGDDNDDSEAEADDSEDEDMDDSNTDYEDISEDDEDGGFDLDEENDKP 320
Query: 287 SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
++ +F+RNLP+T ++ L+EHF +FG V +V+D++T+R KG +V
Sbjct: 321 KREEYT--------IFIRNLPFTVDDERLKEHFQQFGGVRFARVVIDRETERPKGTGFVS 372
Query: 347 Y 347
+
Sbjct: 373 F 373
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+LFVR L T T ++L HFS+ + +V+DK+T+ SKG +V +A E A RA E
Sbjct: 50 QLFVRGLAPTVTTEDLTNHFSESYPIKNALVVLDKETRESKGYGFVTFADVEDAQRAKEE 109
Query: 360 LDNSIFQGRLLH--VMPARHKKSSDKQ 384
L+NS +G+ + V AR ++ +K+
Sbjct: 110 LNNSELKGKKIKVDVAEARQREGEEKR 136
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 18/123 (14%)
Query: 616 RSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETA 675
R LFV+ L E+L HF E L V L S G+GF+ F VE A
Sbjct: 49 RQLFVRGLAPTVTTEDLTNHFSESYPIKNALVV-----LDKETRESKGYGFVTFADVEDA 103
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVK--------KAE-----KDKSSTKLLVRN 722
+L + L G + + + A++ E K KAE KD + KL++RN
Sbjct: 104 QRAKEELNNSELKGKKIKVDVAEARQREGEEKRPKAGDRAKAERAQQIKDAQTPKLIIRN 163
Query: 723 VAF 725
+ +
Sbjct: 164 LPW 166
>gi|295665859|ref|XP_002793480.1| nucleolar protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226277774|gb|EEH33340.1| nucleolar protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 691
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFVR+LP +AT + L ++FS+ + +V+D TK+SKG +V +A E +RA+E
Sbjct: 50 LFVRSLPLSATTESLTDYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADCEDVARALEEF 109
Query: 361 DNSIFQGRLLHVMPA--RHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWN 418
+ S F G+ L + A RH+K +K STS K +RE E K
Sbjct: 110 NGSAFDGKKLKIEVAEPRHRKVDEKGGKSVSTS------KPKRERENK-----------R 152
Query: 419 SLFMRPDTVVENI 431
+L P ++ N+
Sbjct: 153 ALVQPPKLIIRNL 165
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+F+RNLP+TAT++ L EHF +FG + +V D +T R +G A+V + E+A+ +
Sbjct: 275 IFIRNLPFTATDESLYEHFVQFGPLRYARVVFDPETDRPRGTAFVCFWDKENANSCL 331
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 23/191 (12%)
Query: 497 FLVKNLPYDSSEGE-LAKMFGKFGSLDKVILPSTKT----LALVVFLEPVEAAAAFKGLA 551
+++NLP+ +E E L +F FG + ++P VV A A + +
Sbjct: 160 LIIRNLPWSIAEPEQLEALFRSFGKVKHAVIPKKGNKHSGFGFVVLRGRKNAEKALEAVN 219
Query: 552 YKRYKGVPLYLEWAP-SDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDP 610
K G L ++WA ++ + K+D E + K A+++
Sbjct: 220 GKEVDGRTLAVDWAAEKNIWDELQNHTDGVKDDGTEKEDNNK-----------VHAEVED 268
Query: 611 DRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFD 670
DR S ++F++NL F DE+L +HF ++ G + +V + + G F+ F
Sbjct: 269 DRNAS-TIFIRNLPFTATDESLYEHF---VQFGPLRYARVVFDPETDR--PRGTAFVCFW 322
Query: 671 SVETATNVCRD 681
E A + RD
Sbjct: 323 DKENANSCLRD 333
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 292 QQEVLESGRLFVRNLPYTATEDE-LREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIP 350
++ +++ +L +RNLP++ E E L F FG V H V+ K + G +V+
Sbjct: 151 KRALVQPPKLIIRNLPWSIAEPEQLEALFRSFGKVK--HAVIPKKGNKHSGFGFVVLRGR 208
Query: 351 ESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNST 390
++A +A+E ++ GR L V A K D EL N T
Sbjct: 209 KNAEKALEAVNGKEVDGRTLAVDWAAEKNIWD--ELQNHT 246
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 27/158 (17%)
Query: 588 EHDAKRALLEQQLEGVTDAD--IDPDRVESR-SLFVKNLNFKTCDENLRKHFGEH--IKE 642
+ D K QQ E + D D + P + ++R +LFV++L E+L +F + +K
Sbjct: 17 QEDGKVPATNQQTEALPDGDAALSPIKAKNRRTLFVRSLPLSATTESLTDYFSQSYPLKH 76
Query: 643 GRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC---HA 699
++ L S G+GF+ F E + G+ DG L +++ H
Sbjct: 77 ATVV-------LDPQTKQSKGYGFVTFADCEDVARALEEFNGSAFDGKKLKIEVAEPRHR 129
Query: 700 KKDEQVVKKAEKDK------------SSTKLLVRNVAF 725
K DE+ K K KL++RN+ +
Sbjct: 130 KVDEKGGKSVSTSKPKRERENKRALVQPPKLIIRNLPW 167
>gi|295668084|ref|XP_002794591.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|225679740|gb|EEH18024.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
gi|226286007|gb|EEH41573.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 188
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T KG AYV + P
Sbjct: 60 KEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSL 119
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V+P R
Sbjct: 120 VAQAL-VLNESVFRGRNLKVVPKR 142
>gi|209879626|ref|XP_002141253.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556859|gb|EEA06904.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 266
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 28/171 (16%)
Query: 254 NEECDSIIKDSIHSGVGEEDANGEIVDPGNPSSSSKDVQQEVLESGRLFVRNLPYTATED 313
NE+ DS+++ N E+ + S S + E +E L VRNL + +
Sbjct: 53 NEQTDSVLQ------------NEEVEEQRRRSRSPDNNTGEPIEGCSLLVRNLRFETSPS 100
Query: 314 ELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHVM 373
+R HF ++G V +V++ +D T+R +G +V Y P A A+ LD S+ G + V+
Sbjct: 101 RVRRHFERYGTVRDVYLPLDYYTRRPRGFGFVEYMDPRDAEDAVNNLDGSVLDGSTIRVV 160
Query: 374 PARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRP 424
A ++ S +T+++ +++ + S +SG ++S F RP
Sbjct: 161 VAHDRRKS------------PETMRKIQKDAARFSRSSG----YSSRFDRP 195
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 571 SQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDE 630
S+ TS N++ D+V+ + + EQ+ + + + +E SL V+NL F+T
Sbjct: 45 SREKTSPQNEQTDSVLQNEEVE----EQRRRSRSPDNNTGEPIEGCSLLVRNLRFETSPS 100
Query: 631 NLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGH 690
+R+HF E R + + + + + + GFGF+E+ A + +L G++LDG
Sbjct: 101 RVRRHF-ERYGTVRDVYLPLDYYTRRPR----GFGFVEYMDPRDAEDAVNNLDGSVLDGS 155
Query: 691 ALILQLCH-AKKDEQVVKKAEKD 712
+ + + H +K + ++K +KD
Sbjct: 156 TIRVVVAHDRRKSPETMRKIQKD 178
>gi|194332974|ref|YP_002014834.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
gi|194310792|gb|ACF45187.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 90
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 49/75 (65%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+++ NLPY TED+LRE F++FG V +I++DK + RSKG +V E A +AI+ L
Sbjct: 3 IYIGNLPYNITEDDLREAFNEFGQVDSANIIIDKFSGRSKGFGFVEMPNDEDAEKAIDSL 62
Query: 361 DNSIFQGRLLHVMPA 375
+++ F GR + V A
Sbjct: 63 NDTDFNGRTIKVNQA 77
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKYF 61
I + NLP +TED LR+ F++ G++ A ++ K G+S+ F F+ +++AE+AI
Sbjct: 3 IYIGNLPYNITEDDLREAFNEFGQVDSANIIIDKFSGRSKGFGFVEMPNDEDAEKAIDSL 62
Query: 62 NKS 64
N +
Sbjct: 63 NDT 65
>gi|166786|gb|AAA32832.1| poly(A)-binding protein [Arabidopsis thaliana]
Length = 668
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 106/211 (50%), Gaps = 34/211 (16%)
Query: 499 VKNLPYDSSEGELAKMFGKFGSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYK 553
VKNLP + ++ EL K FGK+G + ++ ++++ V F+ P EAAA +A +
Sbjct: 229 VKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSP-EAAA----VAVE 283
Query: 554 RYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRV 613
+ G+ L DVL + +K+D E + +R ++++ +++
Sbjct: 284 KMNGISLG-----EDVLY---VGRAQKKSDR---EEELRRKFEQERISRF-------EKL 325
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
+ +L++KNL+ DE L++ F E+ G + S KV + N + +S GFGF+ + + E
Sbjct: 326 QGSNLYLKNLDDSVNDEKLKEMFSEY---GNVTSCKV---MMNSQGLSRGFGFVAYSNPE 379
Query: 674 TATNVCRDLQGTILDGHALILQLCHAKKDEQ 704
A +++ G ++ L + L K++ Q
Sbjct: 380 EALLAMKEMNGKMIGRKPLYVALAQRKEERQ 410
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNLPK +T+D L+ F + G+I+ A +M+ + G SR F F+ F + + A A++
Sbjct: 225 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEK 284
Query: 61 FN 62
N
Sbjct: 285 MN 286
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 60/105 (57%), Gaps = 13/105 (12%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V+NLP T+DEL++ F K+G++S +V+ + S+ +V + PE+A+ A+E +
Sbjct: 227 VYVKNLPKEITDDELKKTFGKYGDISSA-VVMKDQSGNSRSFGFVNFVSPEAAAVAVEKM 285
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEER 405
+ +L+V R +K SD++E L+++ E+ER
Sbjct: 286 NGISLGEDVLYV--GRAQKKSDREE----------ELRRKFEQER 318
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S + +KNL V +++L++ FS+ G +T K+M G SR F F+ + +EA A+K
Sbjct: 328 SNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKE 387
Query: 61 FNKSYLDTCRISCEIARK 78
N + + +A++
Sbjct: 388 MNGKMIGRKPLYVALAQR 405
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 135/306 (44%), Gaps = 49/306 (16%)
Query: 287 SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
S++D + G +F++NL + L E FS FG + + +D RSKG +V
Sbjct: 120 SNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDV-VGRSKGYGFVQ 178
Query: 347 YAIPESASRAIEVL------DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTL-KQ 399
+ E+A AI+ L D +F G H + + + S+ + + T+ K L K+
Sbjct: 179 FEKEETAQAAIDKLNGMLLNDKQVFVG---HFVRRQDRARSESGAVPSFTNVYVKNLPKE 235
Query: 400 RREEERKAS--------------EASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLD 444
++E K + + SGN++++ + F+ P+ + + +G+S + +
Sbjct: 236 ITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDV- 294
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPY 504
+ +G Q ++ ++ L E+ + + L+ SN +KNL
Sbjct: 295 ---------LYVGRAQKKSDREEELRR------KFEQERISRFEKLQGSN--LYLKNLDD 337
Query: 505 DSSEGELAKMFGKFGSLD--KVILPS---TKTLALVVFLEPVEAAAAFKGLAYKRYKGVP 559
++ +L +MF ++G++ KV++ S ++ V + P EA A K + K P
Sbjct: 338 SVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKP 397
Query: 560 LYLEWA 565
LY+ A
Sbjct: 398 LYVALA 403
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
E L+ L+++NL + +++L+E FS++GNV+ ++++ S+G +V Y+ PE A
Sbjct: 323 EKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQG-LSRGFGFVAYSNPEEA 381
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKK 379
A++ ++ + + L+V A+ K+
Sbjct: 382 LLAMKEMNGKMIGRKPLYVALAQRKE 407
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + E L + F++ V + + D T RS G AYV +A PE ASRA+E L
Sbjct: 47 LYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAMESL 105
Query: 361 DNSIFQGRLLHVM 373
+ + + R + +M
Sbjct: 106 NYAPIRDRPIRIM 118
>gi|336453846|ref|YP_004608312.1| Rna-binding protein [Helicobacter bizzozeronii CIII-1]
gi|421882064|ref|ZP_16313357.1| RNA-binding protein [Helicobacter bizzozeronii CCUG 35545]
gi|335333873|emb|CCB80600.1| Rna-binding protein [Helicobacter bizzozeronii CIII-1]
gi|375315779|emb|CCF81353.1| RNA-binding protein [Helicobacter bizzozeronii CCUG 35545]
Length = 85
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+AT E+ + FS+FG VS V ++ D++TKR KG +V E A +AI L
Sbjct: 8 IYVGNLVYSATNKEVEDLFSQFGAVSSVKLIQDRETKRPKGFGFVEME-DEGALKAISSL 66
Query: 361 DNSIFQGRLLHVMPARHKK 379
DN+ F GR + V A +K
Sbjct: 67 DNTDFMGRTIRVTEANPRK 85
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%)
Query: 295 VLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESAS 354
+ S +LFV L + E L++ FS+FGNV E I++D+++ RS+G ++ + E AS
Sbjct: 28 CMSSSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEAS 87
Query: 355 RAIEVLDNSIFQGRLLHVMPARHK 378
A+ +D QGR + V A +
Sbjct: 88 AAMTSMDGKELQGRNIRVNHANER 111
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 596 LEQQLEGVTDADIDPDRVESRS-LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHL 654
L + L + P R S S LFV L+F T + L+ F E G +L ++
Sbjct: 11 LRRTLAPTCSPLLQPVRCMSSSKLFVGGLSFATDETTLKDAFSEF---GNVLEARIIIDR 67
Query: 655 KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKK 701
++G+ S GFGFI F S E A+ + G L G +++ HA +
Sbjct: 68 ESGR--SRGFGFITFTSTEEASAAMTSMDGKELQGRN--IRVNHANE 110
>gi|170056280|ref|XP_001863959.1| RNA-binding protein 28 [Culex quinquefasciatus]
gi|167876028|gb|EDS39411.1| RNA-binding protein 28 [Culex quinquefasciatus]
Length = 663
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RL VRN+ Y T+ +LRE F KFG + EV+I+ D R G A++ Y E + +AI
Sbjct: 66 RLIVRNVSYQITDKKLREAFEKFGTLEEVNILKRPDG-RLVGCAFLQYTKKEESDKAIAN 124
Query: 360 LDNSIFQGRLLHVMPARHKK 379
+D +F GR L V A HKK
Sbjct: 125 MDGDVFMGRKLEVKYAMHKK 144
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 296 LESGR-LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
+E GR +F++N+PY A E L++ S+FG V V I ++ + KG A+V++ + +SA
Sbjct: 234 IEEGRTVFLKNVPYDADESSLKDVMSQFGIVERVLINKERISGHPKGTAFVIFKLKDSA 292
>gi|7239504|gb|AAF43230.1|AC012654_14 Identical to the polyadenylate-binding protein 5 (PAB5) from
Arabidopsis thaliana gb|M97657 [Arabidopsis thaliana]
Length = 668
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 106/211 (50%), Gaps = 34/211 (16%)
Query: 499 VKNLPYDSSEGELAKMFGKFGSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYK 553
VKNLP + ++ EL K FGK+G + ++ ++++ V F+ P EAAA +A +
Sbjct: 229 VKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSP-EAAA----VAVE 283
Query: 554 RYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRV 613
+ G+ L DVL + +K+D E + +R ++++ +++
Sbjct: 284 KMNGISLG-----EDVLY---VGRAQKKSDR---EEELRRKFEQERISRF-------EKL 325
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
+ +L++KNL+ DE L++ F E+ G + S KV + N + +S GFGF+ + + E
Sbjct: 326 QGSNLYLKNLDDSVNDEKLKEMFSEY---GNVTSCKV---MMNSQGLSRGFGFVAYSNPE 379
Query: 674 TATNVCRDLQGTILDGHALILQLCHAKKDEQ 704
A +++ G ++ L + L K++ Q
Sbjct: 380 EALLAMKEMNGKMIGRKPLYVALAQRKEERQ 410
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNLPK +T+D L+ F + G+I+ A +M+ + G SR F F+ F + + A A++
Sbjct: 225 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEK 284
Query: 61 FN 62
N
Sbjct: 285 MN 286
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 60/105 (57%), Gaps = 13/105 (12%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V+NLP T+DEL++ F K+G++S +V+ + S+ +V + PE+A+ A+E +
Sbjct: 227 VYVKNLPKEITDDELKKTFGKYGDISSA-VVMKDQSGNSRSFGFVNFVSPEAAAVAVEKM 285
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEER 405
+ +L+V R +K SD++E L+++ E+ER
Sbjct: 286 NGISLGEDVLYV--GRAQKKSDREE----------ELRRKFEQER 318
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S + +KNL V +++L++ FS+ G +T K+M G SR F F+ + +EA A+K
Sbjct: 328 SNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKE 387
Query: 61 FNKSYLDTCRISCEIARK 78
N + + +A++
Sbjct: 388 MNGKMIGRKPLYVALAQR 405
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 135/306 (44%), Gaps = 49/306 (16%)
Query: 287 SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
S++D + G +F++NL + L E FS FG + + +D RSKG +V
Sbjct: 120 SNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDV-VGRSKGYGFVQ 178
Query: 347 YAIPESASRAIEVL------DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTL-KQ 399
+ E+A AI+ L D +F G H + + + S+ + + T+ K L K+
Sbjct: 179 FEKEETAQAAIDKLNGMLLNDKQVFVG---HFVRRQDRARSESGAVPSFTNVYVKNLPKE 235
Query: 400 RREEERKAS--------------EASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLD 444
++E K + + SGN++++ + F+ P+ + + +G+S + +
Sbjct: 236 ITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDV- 294
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPY 504
+ +G Q ++ ++ L E+ + + L+ SN +KNL
Sbjct: 295 ---------LYVGRAQKKSDREEELRR------KFEQERISRFEKLQGSN--LYLKNLDD 337
Query: 505 DSSEGELAKMFGKFGSLD--KVILPS---TKTLALVVFLEPVEAAAAFKGLAYKRYKGVP 559
++ +L +MF ++G++ KV++ S ++ V + P EA A K + K P
Sbjct: 338 SVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKP 397
Query: 560 LYLEWA 565
LY+ A
Sbjct: 398 LYVALA 403
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
E L+ L+++NL + +++L+E FS++GNV+ ++++ S+G +V Y+ PE A
Sbjct: 323 EKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQG-LSRGFGFVAYSNPEEA 381
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKK 379
A++ ++ + + L+V A+ K+
Sbjct: 382 LLAMKEMNGKMIGRKPLYVALAQRKE 407
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + E L + F++ V + + D T RS G AYV +A PE ASRA+E L
Sbjct: 47 LYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAMESL 105
Query: 361 DNSIFQGRLLHVM 373
+ + + R + +M
Sbjct: 106 NYAPIRDRPIRIM 118
>gi|38344030|emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group]
gi|38346331|emb|CAE02067.2| OJ000126_13.13 [Oryza sativa Japonica Group]
gi|116309334|emb|CAH66418.1| H0622F05.1 [Oryza sativa Indica Group]
gi|116309399|emb|CAH66476.1| OSIGBa0137L20.5 [Oryza sativa Indica Group]
Length = 137
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
RLF+ L ATED L E FS++G V E IV DK T R KG +V +A E+A++A E
Sbjct: 38 RLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEE 97
Query: 360 LDNSIFQGRLLHVMPARHK 378
++ + GR+++V A+ K
Sbjct: 98 MNGKVLNGRVIYVDIAKAK 116
Score = 40.8 bits (94), Expect = 2.4, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTK-DGKSRQFAFIGFRTEQEAEEAIKY 60
R+ + L ++ TED L + FSQ G++ +A ++ K + + F F+ F +E+ A +A +
Sbjct: 38 RLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEE 97
Query: 61 FNKSYLDTCRISCEIAR 77
N L+ I +IA+
Sbjct: 98 MNGKVLNGRVIYVDIAK 114
>gi|357152395|ref|XP_003576105.1| PREDICTED: uncharacterized protein LOC100823193 [Brachypodium
distachyon]
Length = 267
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 285 SSSSKDVQQEV--LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
+SS+ + Q + + S ++FV L Y E LRE F+ +G++ + I+VD +++RS+G
Sbjct: 15 TSSNPTLYQAIRCMSSSKIFVGGLSYNTDETGLREAFTHYGDIIDAKIIVDHESRRSRGF 74
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSS 381
++ YA + A AI LD GR + V A + S
Sbjct: 75 GFITYAAEDQAKAAIMALDGKELHGRNIRVSEANERTSG 113
>gi|261205936|ref|XP_002627705.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239592764|gb|EEQ75345.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239611077|gb|EEQ88064.1| RNP domain-containing protein [Ajellomyces dermatitidis ER-3]
gi|327350679|gb|EGE79536.1| RNP domain-containing protein [Ajellomyces dermatitidis ATCC 18188]
Length = 189
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T KG AYV + P
Sbjct: 60 KEDIDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSL 119
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR L V+P R
Sbjct: 120 VAQAL-VLNESVFRGRNLKVVPKR 142
>gi|168705058|ref|ZP_02737335.1| RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 100
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L+V NLP+ AT DELRE FS FG V I D+DT S+G A+V A E A A++
Sbjct: 3 KLYVGNLPFNATADELREMFSAFGRVLSATICTDRDTGNSRGFAFVELA--EGADEAVQG 60
Query: 360 LDNSIFQGRLLHVMPARHKK 379
L+ + F GR L V A+ ++
Sbjct: 61 LNQAQFGGRSLTVNEAKPRE 80
>gi|167560891|ref|NP_001107973.1| zinc finger CCHC-type and RNA binding motif 1 [Xenopus (Silurana)
tropicalis]
gi|165970829|gb|AAI58311.1| zcrb1 protein [Xenopus (Silurana) tropicalis]
Length = 215
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++ T ++L FSK+G V +V I+ DKD++RSKG+A+VL+ ES+ + L
Sbjct: 12 VYVSNLPFSLTNNDLHRIFSKYGKVVKVTILKDKDSRRSKGVAFVLFLDKESSQNCVRGL 71
Query: 361 DNSIFQGRLL 370
+N GR +
Sbjct: 72 NNKQLFGRAI 81
>gi|109947722|ref|YP_664950.1| RNA-binding protein [Helicobacter acinonychis str. Sheeba]
gi|109714943|emb|CAJ99951.1| RNA-binding protein [Helicobacter acinonychis str. Sheeba]
Length = 82
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+AT +E++E FS+FG V V ++ D++TK+ KG +V E + AI L
Sbjct: 4 IYVGNLVYSATSEEVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQ-EEGINEAIAKL 62
Query: 361 DNSIFQGRLLHVMPARHKKS 380
+N+ F GR++ V A KKS
Sbjct: 63 NNTDFMGRIIRVTEANPKKS 82
>gi|336465951|gb|EGO54116.1| hypothetical protein NEUTE1DRAFT_87204 [Neurospora tetrasperma FGSC
2508]
gi|350287213|gb|EGZ68460.1| polyadenylate binding protein [Neurospora tetrasperma FGSC 2509]
Length = 764
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 171/462 (37%), Gaps = 117/462 (25%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
S L+V L + TE L E FS+ G+V+ + + D T+RS G AYV Y +A+
Sbjct: 59 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 118
Query: 358 EVLDNSIFQGRLLHVM-----PARHKKSS------------DKQELHNSTSQGTKTLKQR 400
E L+ ++ +GR +M PA K + D + LH++ + L +
Sbjct: 119 EELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILSCK 178
Query: 401 REEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQ 460
A + GN+K + + D A KH LL+ + + I + Q
Sbjct: 179 -----VAQDEHGNSKGYGFVHYETDEAASQ-AIKH--VNGMLLNEKKVYVGHHIPKKDRQ 230
Query: 461 VIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGS 520
S EE A T+ VKN+ + ++ E ++F KFG
Sbjct: 231 ----------------SKFEEMKANFTN--------VYVKNINNEVTDEEFRELFAKFGE 266
Query: 521 LDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSST 575
+ L T+ V F AA A L K ++G LY+ A
Sbjct: 267 VTSSSLARDQEGKTRGFGFVNFTTHEAAAQAVDELNGKDFRGQDLYVGRA---------- 316
Query: 576 SKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKH 635
K +++ + + ++A R + +GV +L++KNL D+ LR
Sbjct: 317 QKKHEREEELRKSYEAARLEKANKYQGV-------------NLYIKNLGDDVDDDKLRAM 363
Query: 636 FGEHIKEGRILSVKV----------------------------------KKHLKNGK--- 658
F E+ G I S KV KK K G
Sbjct: 364 FSEY---GPITSAKVMRDSLIEGSEEKDEKDKENKKEGEAEEEQKEGSEKKTEKKGDRKL 420
Query: 659 NVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
S GFGF+ F + + AT ++ ++DG L + L K
Sbjct: 421 GKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRK 462
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKN+ VT++ R+ F++ GE+T + L R ++GK+R F F+ F T + A +A+
Sbjct: 241 TNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKTRGFGFVNFTTHEAAAQAVDE 300
Query: 61 FN 62
N
Sbjct: 301 LN 302
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFV L + +D L++ F KFG V ++ ++ T+RSKG YV +A PE A +A+E +
Sbjct: 403 LFVGGLSWNVDDDWLKKEFEKFGEVISARVITERGTERSKGFGYVDFASPEDARKAVEAM 462
Query: 361 DNSIFQGRLLHV--------MPARHKKSSDKQELHNSTS 391
+ GR ++V P + K+S ++EL T+
Sbjct: 463 AGTEIDGRTINVDFSAPKPERPPQEKRSFGQEELSAPTT 501
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 616 RSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETA 675
++LFV L++ D+ L+K F K G ++S +V + G S GFG+++F S E A
Sbjct: 401 KNLFVGGLSWNVDDDWLKKEFE---KFGEVISARV--ITERGTERSKGFGYVDFASPEDA 455
Query: 676 TNVCRDLQGTILDGHALILQLCHAKKDEQVVKK-----AEKDKSSTKLLVRNVAFEAQR 729
+ GT +DG + + K + +K E +T L + N+ F A +
Sbjct: 456 RKAVEAMAGTEIDGRTINVDFSAPKPERPPQEKRSFGQEELSAPTTTLFIGNLPFSATQ 514
>gi|166367328|ref|YP_001659601.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|425440525|ref|ZP_18820825.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
gi|166089701|dbj|BAG04409.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|389719028|emb|CCH97091.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9717]
Length = 100
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y T D+L+E F+++G VS V++ VD++T + +G +V + E ++AIE L
Sbjct: 3 IYVGNLVYDVTTDDLKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIETL 62
Query: 361 DNSIFQGRLLHVMPARHKK 379
D + + GR + V AR K+
Sbjct: 63 DGAEWMGRQMKVNKARPKE 81
>gi|425781538|gb|EKV19498.1| Ribosome biogenesis (Nop4), putative [Penicillium digitatum PHI26]
gi|425782769|gb|EKV20659.1| Ribosome biogenesis (Nop4), putative [Penicillium digitatum Pd1]
Length = 722
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFVR+LP +AT + L EHFS+ + +V DK+TK SKG +V +A E A A++
Sbjct: 38 LFVRSLPTSATTESLAEHFSQSYIIKHAVVVSDKETKVSKGFGFVTFADVEDAESALKEF 97
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNST-SQGTKTLKQRREEER 405
+ S F G+++ V A +K +++ S + ++ K+++EEER
Sbjct: 98 NGSKFDGKIIRVDYAESRKREIDEKIGRSVPTAASRESKKQKEEER 143
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 301 LFVRNLPYTATEDELREHF-SKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAI 357
+F+RNLP++AT+ L +HF + FG + +V+D +T+R +G +V + PE A+ I
Sbjct: 303 IFIRNLPFSATDQALYDHFKTHFGPLRYARVVLDYETERPRGTGFVCFWKPEDANTCI 360
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 597 EQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEH--IKEGRILSVKVKKHL 654
E ++E T A R+LFV++L E+L +HF + IK ++S K K
Sbjct: 17 ETKVEATTPAAEASAAQNKRTLFVRSLPTSATTESLAEHFSQSYIIKHAVVVSDKETK-- 74
Query: 655 KNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDE 703
VS GFGF+ F VE A + ++ G+ DG + + ++K E
Sbjct: 75 -----VSKGFGFVTFADVEDAESALKEFNGSKFDGKIIRVDYAESRKRE 118
>gi|384099683|ref|ZP_10000766.1| RNP-1 like RNA-binding protein [Imtechella halotolerans K1]
gi|383832219|gb|EID71694.1| RNP-1 like RNA-binding protein [Imtechella halotolerans K1]
Length = 92
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+FV NL + +E++L + F+ FG VS V ++VD + RS+G A+V + E A AIE L
Sbjct: 3 IFVGNLSFQTSEEQLLDVFTPFGEVSSVKVIVDGYSNRSRGFAFVEMPVSEHALTAIERL 62
Query: 361 DNSIFQGRLLHVMPARHKKSSDK 383
+ S+ R++ V A+ K+S+D+
Sbjct: 63 NESMLDSRVIVVNEAKPKRSNDR 85
>gi|358378925|gb|EHK16606.1| hypothetical protein TRIVIDRAFT_19040, partial [Trichoderma virens
Gv29-8]
Length = 171
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y+A+ +E++ HF G+++ V I++DK T + KG AYV + P
Sbjct: 38 KESVDARSIFVGNVDYSASPEEVQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSL 97
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V P R
Sbjct: 98 VAQAL-VLNESVFKGRNIKVTPKR 120
>gi|327279532|ref|XP_003224510.1| PREDICTED: putative RNA-binding protein 3-like isoform 1 [Anolis
carolinensis]
Length = 152
Score = 63.5 bits (153), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV ++ DK+T+RS+G ++ +A PE AS A
Sbjct: 4 EEGKLFVGGLNFDTDEQGLEQHFSSFGPISEVVVIKDKETQRSRGFGFITFANPEHASDA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESVDGRQIRV 79
Score = 41.2 bits (95), Expect = 2.3, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L +HF ++ +K K+ + S GFGFI F + E
Sbjct: 4 EEGKLFVGGLNFDTDEQGLEQHFSSFGPISEVVVIKDKETQR-----SRGFGFITFANPE 58
Query: 674 TATNVCRDLQGTILDGHAL 692
A++ R + G +DG +
Sbjct: 59 HASDAMRAMNGESVDGRQI 77
>gi|94733636|emb|CAK04114.1| novel protein (zgc:56258) [Danio rerio]
Length = 865
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 146/338 (43%), Gaps = 56/338 (16%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFVR LP TA+ + L E FS+ G + +V DK+ K+ +G YV +++ + A RA++ +
Sbjct: 6 LFVRRLPETASNEHLAEIFSEIGPLKNCFVVCDKE-KKCRGFGYVTFSMEDDAQRALKEV 64
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQ--GTKTLKQRREEERKASEASGNTK--- 415
++ + + V A+ K K++ + T++ G Q+ E + E TK
Sbjct: 65 --KLYDDQKIFVTVAKKKLDDKKRKKNAKTNKDSGDTEESQKSGETKNTEEIPSPTKKKE 122
Query: 416 -AW----NSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAET----- 465
W N F D ++ I K G + + + A + + ++E
Sbjct: 123 NGWLIIRNLSFKCEDDELKQIFSKFGTVLETRIPLKPDGKKKGFAFVQFKCVSEAEKARA 182
Query: 466 ---KKALTNAGVNV------------------------SSLEEFSAGKTDGLKRSNHVFL 498
+KA+ + V V +S E+F + LK +
Sbjct: 183 AMNRKAIRDRPVEVDWTTSNTESADPEDTEEPHKAEETTSTEKFKGIRKIKLKSR---LI 239
Query: 499 VKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAAAFKGLAYK 553
++NL + E +L ++F +FG++ + +P + A V+F EA A + K
Sbjct: 240 IRNLSFKCEEDDLKQIFSEFGTVLEAKIPLKPDGKKRGFAFVLFKRMPEAGKALTAMNGK 299
Query: 554 RYKGVPLYLEWAPSD---VLSQSSTSKGNQKNDAVVGE 588
+ K + ++WA + + +QS+++ GN K + V G+
Sbjct: 300 KIKDRQVAVDWAIAKDKYLATQSASAAGNIKEENVTGK 337
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E+G L +RNL + +DEL++ FSKFG V E I + D K+ KG A+V + A +A
Sbjct: 122 ENGWLIIRNLSFKCEDDELKQIFSKFGTVLETRIPLKPDGKK-KGFAFVQFKCVSEAEKA 180
Query: 357 IEVLDNSIFQGRLLHV 372
++ + R + V
Sbjct: 181 RAAMNRKAIRDRPVEV 196
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 95/200 (47%), Gaps = 27/200 (13%)
Query: 491 KRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP-----STKTLALVVFLEPVEAAA 545
K+ N +++NL + + EL ++F KFG++ + +P K A V F EA
Sbjct: 120 KKENGWLIIRNLSFKCEDDELKQIFSKFGTVLETRIPLKPDGKKKGFAFVQFKCVSEAEK 179
Query: 546 AFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTD 605
A + K + P+ ++W S+ ++S+ + ++ H A+ ++ +G+
Sbjct: 180 ARAAMNRKAIRDRPVEVDWTTSN--TESADPEDTEE------PHKAEETTSTEKFKGIRK 231
Query: 606 ADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLK-NGKNVSMGF 664
+++SR L ++NL+FK +++L++ F E G +L K+ LK +GK GF
Sbjct: 232 I-----KLKSR-LIIRNLSFKCEEDDLKQIFSEF---GTVLEAKI--PLKPDGK--KRGF 278
Query: 665 GFIEFDSVETATNVCRDLQG 684
F+ F + A + G
Sbjct: 279 AFVLFKRMPEAGKALTAMNG 298
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
SR+ ++NL ED L+ FS+ G + +AK+ DGK R FAF+ F+ EA +A+
Sbjct: 236 SRLIIRNLSFKCEEDDLKQIFSEFGTVLEAKIPLKPDGKKRGFAFVLFKRMPEAGKALTA 295
Query: 61 FN 62
N
Sbjct: 296 MN 297
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKYFN 62
+ ++NL +D L+ FS+ G + + ++ DGK + FAF+ F+ EAE+A N
Sbjct: 126 LIIRNLSFKCEDDELKQIFSKFGTVLETRIPLKPDGKKKGFAFVQFKCVSEAEKARAAMN 185
Query: 63 KSYL 66
+ +
Sbjct: 186 RKAI 189
>gi|428779944|ref|YP_007171730.1| RRM domain-containing RNA-binding protein [Dactylococcopsis salina
PCC 8305]
gi|428694223|gb|AFZ50373.1| RRM domain-containing RNA-binding protein [Dactylococcopsis salina
PCC 8305]
Length = 95
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+ T+D+L E F+++G V VH+ D++T R +G +V A S AI L
Sbjct: 3 IYVGNLDYSVTQDDLSEVFAEYGTVKRVHLPTDRETGRMRGFGFVEMASETEESNAISEL 62
Query: 361 DNSIFQGRLLHVMPARHKKS 380
D + + GR L V PAR +++
Sbjct: 63 DGAEWMGRELKVNPARPREN 82
>gi|338729124|ref|XP_003365829.1| PREDICTED: putative RNA-binding protein 3-like isoform 2 [Equus
caballus]
Length = 135
Score = 63.5 bits (153), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESLDGRQIRV 79
Score = 41.6 bits (96), Expect = 1.6, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L HF ++ VK ++ + S GFGFI F + E
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQR-----SRGFGFITFTNPE 58
Query: 674 TATNVCRDLQGTILDGHAL 692
A++ R + G LDG +
Sbjct: 59 HASDAMRAMNGESLDGRQI 77
>gi|224067534|ref|XP_002302501.1| predicted protein [Populus trichocarpa]
gi|222844227|gb|EEE81774.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+FV L ATED+LR+ FS+ G V+EV ++++ TK++KG A++ +A E A RA+ L
Sbjct: 34 VFVGGLDKDATEDDLRKIFSRVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRAVTEL 93
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTK 395
N + G+ V P+ + SD L N TK
Sbjct: 94 KNPVINGKQCGVTPS---QDSDTLFLGNICKTWTK 125
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKL-MRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ V L K TED LR FS+ GE+T+ +L M + K++ FAF+ F T ++A+ A+
Sbjct: 34 VFVGGLDKDATEDDLRKIFSRVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRAV 90
>gi|395841539|ref|XP_003793592.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Otolemur garnettii]
Length = 217
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 47/70 (67%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++ T ++L FSK+G V +V I+ DKDT++SKG+A++L+ +SA +
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRAI 71
Query: 361 DNSIFQGRLL 370
+N GR++
Sbjct: 72 NNKQLFGRMI 81
>gi|328871935|gb|EGG20305.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 567
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 166/410 (40%), Gaps = 58/410 (14%)
Query: 296 LESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASR 355
S L+V +L T+ +L E F++ G V+ + I D T+RS AYV Y P A R
Sbjct: 5 FSSSSLYVGDLHQDVTDSQLFEIFNQVGPVANLRICRDTTTRRSLNYAYVNYHNPADAER 64
Query: 356 AIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTK 415
A++ L+N++ +G+ +M ++ S K + N K L + + + S
Sbjct: 65 ALDTLNNTLVKGKACRIMWSQRDPSLRKSGVGNIF---IKNLDKSVDHKALFDTFSA--- 118
Query: 416 AWNSLFMRPDTVVENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGVN 475
N L + T N+++ G + E+ D A + + +I +K G
Sbjct: 119 FGNILSCKVVTDETNVSKGFG-----FVHYESQDSADKAIMKVNGMIINDQKVFV--GPF 171
Query: 476 VSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILPS-----TK 530
SS E G+T LK +N VKNL D +E EL + +G + + + S +K
Sbjct: 172 KSSKER---GQTQELKYTN--VYVKNLSEDVNEEELRDLLVPYGKITNLTIMSDEKSKSK 226
Query: 531 TLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHD 590
F P EA + K + G +Y+ A QK E
Sbjct: 227 GFGFANFETPDEAKNCVEAENGKLFHGKVIYVGRA--------------QKKMEREAELK 272
Query: 591 AKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKV 650
K E + +GV +L++KN++ + LR F + G I S KV
Sbjct: 273 HK---FETKYQGV-------------NLYIKNIDDSIDSDKLRSTFAAY---GTITSAKV 313
Query: 651 KKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAK 700
+ K+ S GFGF+ + + + A+ ++ G ++ L + K
Sbjct: 314 MRDDKS--TSSKGFGFVCYTTPDEASKAVAEMHGRMVGNKPLYVAFAQRK 361
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 284 PSSSSKDV-QQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGI 342
P SSK+ Q + L+ ++V+NL E+ELR+ +G ++ + I+ D+ +K SKG
Sbjct: 170 PFKSSKERGQTQELKYTNVYVKNLSEDVNEEELRDLLVPYGKITNLTIMSDEKSK-SKGF 228
Query: 343 AYVLYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELH 387
+ + P+ A +E + +F G++++V A+ K + + H
Sbjct: 229 GFANFETPDEAKNCVEAENGKLFHGKVIYVGRAQKKMEREAELKH 273
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAI 58
+ + VKNL + V E+ LRD G+IT+ +M + KS+ F F F T EA+ +
Sbjct: 186 TNVYVKNLSEDVNEEELRDLLVPYGKITNLTIMSDEKSKSKGFGFANFETPDEAKNCV 243
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 3 ICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR-TKDGKSRQFAFIGFRTEQEAEEAI 58
+ +KN+ + D+LR F+ G IT AK+MR K S+ F F+ + T EA +A+
Sbjct: 284 LYIKNIDDSIDSDKLRSTFAAYGTITSAKVMRDDKSTSSKGFGFVCYTTPDEASKAV 340
>gi|327302280|ref|XP_003235832.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
gi|326461174|gb|EGD86627.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
Length = 186
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T KG AYV ++ P
Sbjct: 61 KEDIDARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSL 120
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V+P R
Sbjct: 121 VAQAL-VLNESLFRGRNIKVVPKR 143
>gi|226443342|ref|NP_001139887.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Salmo salar]
gi|221219686|gb|ACM08504.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Salmo salar]
Length = 221
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP++ T +L + FSK+G V +V IV DK+T++SKG+A+VL+ ESA L
Sbjct: 12 VYVSNLPFSLTNSDLHKLFSKYGKVVKVTIVKDKETRKSKGVAFVLFLDKESAQSCFRSL 71
Query: 361 DNSIFQGRLL 370
+N GR +
Sbjct: 72 NNKQLFGRTV 81
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 489 GLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVILP------STKTLALVVFLEPVE 542
GL S V NLP+ + +L K+F K+G + KV + +K +A V+FL+
Sbjct: 4 GLAPSRSTVYVSNLPFSLTNSDLHKLFSKYGKVVKVTIVKDKETRKSKGVAFVLFLDKES 63
Query: 543 AAAAFKGLAYKRYKG 557
A + F+ L K+ G
Sbjct: 64 AQSCFRSLNNKQLFG 78
>gi|403417653|emb|CCM04353.1| predicted protein [Fibroporia radiculosa]
Length = 941
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 111/258 (43%), Gaps = 36/258 (13%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFV NLPY+AT +L+ FS F V +V+D+ + SKG+ YV +AI E A A+E +
Sbjct: 26 LFVSNLPYSATSVDLQTLFSDFAPVRSAFVVLDQASGISKGVGYVSFAIKEDAQMALEKV 85
Query: 361 DNS--IFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWN 418
D GR L + + KS DK + + L R+ K S S ++ +
Sbjct: 86 DREGIALDGRSLRLQWP-NNKSKDKSSQNKVKITRPEDLDARKA---KPSRPSSSSAPRD 141
Query: 419 SLFMR------------PDTVVENIARKHGVSKSDLLD---------------REANDLA 451
L +R T+ + I + G K D +D AN L
Sbjct: 142 PLAIRTVVITGLPRTADSKTIWKKIRKLEGAEKVDCVDSSAAHALFVTPATAMEAANKLH 201
Query: 452 VRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGEL 511
+ G +++ T K + N + + K R++ +V+NLP+D +E +L
Sbjct: 202 AHVFKG--SLLSATLKKRLDGLANAPKKLQAAKEKGPAPNRASR-LIVRNLPFDITEQDL 258
Query: 512 AKMFGKFGSLDKVILPST 529
+F +G + + +PS
Sbjct: 259 RAVFLPYGPIYSIDIPSV 276
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
LFVRN+P+ ATEDELR F FG + I +D + RS+G +V + A +AIE
Sbjct: 482 LFVRNVPFEATEDELRTLFRAFGPLRYARITMDHEIGRSRGTGFVCFWNKADADKAIE 539
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 30/131 (22%)
Query: 298 SGRLFVRNLPYTATEDELREHFSKFGNVSEVHI------------VVDKDTKRSKGIAYV 345
+ RL VRNLP+ TE +LR F +G + + I V R KG A+V
Sbjct: 241 ASRLIVRNLPFDITEQDLRAVFLPYGPIYSIDIPSVEAPKPEEEDVRPSAAPRKKGFAFV 300
Query: 346 LYAIPESASRAIEVLDNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEER 405
A RA+E + + + + SDKQ K KQRREE++
Sbjct: 301 WMLSRMDAERAMEQCNGIAVEAGMAERL------VSDKQ----------KRKKQRREEQK 344
Query: 406 --KASEASGNT 414
KAS A G+
Sbjct: 345 IMKASGAVGHA 355
>gi|425472294|ref|ZP_18851145.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9701]
gi|389881662|emb|CCI37811.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9701]
Length = 97
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP+ ++++ E F ++G + VH +D++TKR +G A+V PE ++AI L
Sbjct: 3 IYVGNLPFEVDQEDVVEVFKEYGEIKRVHFPMDRETKRKRGFAFVEMETPEQEAKAIAAL 62
Query: 361 DNSIFQGRLLHVMPARHKKS 380
D + + GR L V AR ++
Sbjct: 63 DGAQWMGRELKVNQAREREP 82
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 290 DVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAI 349
D E +G LFV N+ + E+ L F +FG ++ V I+ D+D+ RSKG YV ++
Sbjct: 233 DAVDESAPTGNLFVGNISWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFSD 292
Query: 350 PESASRAIEVLDNSIFQGRLLHV 372
P++A +A+E + + GR L +
Sbjct: 293 PQNAKKALEAKNGAELDGRELRL 315
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 85/220 (38%), Gaps = 34/220 (15%)
Query: 486 KTDGLKRSNHV--FLVKNLPYDSSEGELAKMFGKFGSLDKVILPS------TKTLALVVF 537
KTD + S V N+ ++ E L + F +FG L V + + +K V F
Sbjct: 231 KTDAVDESAPTGNLFVGNISWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEF 290
Query: 538 LEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLE 597
+P A A + G L L++ S + GN+ ND D A
Sbjct: 291 SDPQNAKKALEAKNGAELDGRELRLDF--STPRTNDGPGAGNKSNDRAARFGDTTNA--- 345
Query: 598 QQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNG 657
+ +LFV N++F + + ++F EH G I +V++ + G
Sbjct: 346 ----------------PAATLFVGNISFDADENAITEYFQEH---GTIKAVRLPTDRETG 386
Query: 658 KNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLC 697
GFG++E S+E A LQG + G + L
Sbjct: 387 --APKGFGYVEMSSIEEAQAAFTALQGADIAGRPIRLDYA 424
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
LFV N+ + A E+ + E+F + G + V + D++T KG YV + E A A L
Sbjct: 350 LFVGNISFDADENAITEYFQEHGTIKAVRLPTDRETGAPKGFGYVEMSSIEEAQAAFTAL 409
Query: 361 DNSIFQGRLLHV 372
+ GR + +
Sbjct: 410 QGADIAGRPIRL 421
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 617 SLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETAT 676
+LFV N+++ +E L + F E G + V++ +G+ S GFG++EF + A
Sbjct: 243 NLFVGNISWNVDEEWLTREFEEF---GELAGVRIITDRDSGR--SKGFGYVEFSDPQNAK 297
Query: 677 NVCRDLQGTILDGHALILQLCHAKKDE 703
G LDG L L + ++
Sbjct: 298 KALEAKNGAELDGRELRLDFSTPRTND 324
>gi|322792842|gb|EFZ16675.1| hypothetical protein SINV_08972 [Solenopsis invicta]
Length = 335
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 257 CDSIIKDSIHSGVGEEDANGE--IVDPGNPSSSSKDVQ--QEVLESGRLFVRNLPYTATE 312
D I + + GE + NG+ I D S + V+ Q+ L +LFV L + T+
Sbjct: 10 SDDIAEQNFAEQNGEAENNGDNSIADNNQESQEDRSVRASQDSLNDRKLFVGGLSWETTD 69
Query: 313 DELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNSI 364
ELREHFS +G++ +++ D +T RS+G A++++A ES + + D+ I
Sbjct: 70 KELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMSAGDHVI 121
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 611 DRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFD 670
D + R LFV L+++T D+ LR+HF + G I S+ VK G+ S GF FI F
Sbjct: 51 DSLNDRKLFVGGLSWETTDKELREHFSAY---GDIESINVKTDPNTGR--SRGFAFIVFA 105
Query: 671 SVET 674
E+
Sbjct: 106 KAES 109
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
G++FV L ++D+++ FS+FG + EV + DK + KG ++ +
Sbjct: 136 GKIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITF 184
>gi|334183839|ref|NP_177322.2| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|334183841|ref|NP_001185373.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|322510110|sp|Q05196.3|PABP5_ARATH RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|332197109|gb|AEE35230.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|332197110|gb|AEE35231.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
Length = 682
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 106/211 (50%), Gaps = 34/211 (16%)
Query: 499 VKNLPYDSSEGELAKMFGKFGSLDKVIL-----PSTKTLALVVFLEPVEAAAAFKGLAYK 553
VKNLP + ++ EL K FGK+G + ++ ++++ V F+ P EAAA +A +
Sbjct: 243 VKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSP-EAAA----VAVE 297
Query: 554 RYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEHDAKRALLEQQLEGVTDADIDPDRV 613
+ G+ L DVL + +K+D E + +R ++++ +++
Sbjct: 298 KMNGISLG-----EDVLY---VGRAQKKSDR---EEELRRKFEQERISRF-------EKL 339
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
+ +L++KNL+ DE L++ F E+ G + S KV + N + +S GFGF+ + + E
Sbjct: 340 QGSNLYLKNLDDSVNDEKLKEMFSEY---GNVTSCKV---MMNSQGLSRGFGFVAYSNPE 393
Query: 674 TATNVCRDLQGTILDGHALILQLCHAKKDEQ 704
A +++ G ++ L + L K++ Q
Sbjct: 394 EALLAMKEMNGKMIGRKPLYVALAQRKEERQ 424
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNLPK +T+D L+ F + G+I+ A +M+ + G SR F F+ F + + A A++
Sbjct: 239 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEK 298
Query: 61 FN 62
N
Sbjct: 299 MN 300
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 60/105 (57%), Gaps = 13/105 (12%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V+NLP T+DEL++ F K+G++S +V+ + S+ +V + PE+A+ A+E +
Sbjct: 241 VYVKNLPKEITDDELKKTFGKYGDISSA-VVMKDQSGNSRSFGFVNFVSPEAAAVAVEKM 299
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEER 405
+ +L+V R +K SD++E L+++ E+ER
Sbjct: 300 NGISLGEDVLYV--GRAQKKSDREE----------ELRRKFEQER 332
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
S + +KNL V +++L++ FS+ G +T K+M G SR F F+ + +EA A+K
Sbjct: 342 SNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKE 401
Query: 61 FNKSYLDTCRISCEIARK 78
N + + +A++
Sbjct: 402 MNGKMIGRKPLYVALAQR 419
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 294 EVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESA 353
E L+ L+++NL + +++L+E FS++GNV+ ++++ S+G +V Y+ PE A
Sbjct: 337 EKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQG-LSRGFGFVAYSNPEEA 395
Query: 354 SRAIEVLDNSIFQGRLLHVMPARHKK 379
A++ ++ + + L+V A+ K+
Sbjct: 396 LLAMKEMNGKMIGRKPLYVALAQRKE 421
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 135/306 (44%), Gaps = 49/306 (16%)
Query: 287 SSKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVL 346
S++D + G +F++NL + L E FS FG + + +D RSKG +V
Sbjct: 134 SNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDV-VGRSKGYGFVQ 192
Query: 347 YAIPESASRAIEVL------DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTL-KQ 399
+ E+A AI+ L D +F G H + + + S+ + + T+ K L K+
Sbjct: 193 FEKEETAQAAIDKLNGMLLNDKQVFVG---HFVRRQDRARSESGAVPSFTNVYVKNLPKE 249
Query: 400 RREEERKAS--------------EASGNTKAWNSL-FMRPDTVVENIARKHGVSKSDLLD 444
++E K + + SGN++++ + F+ P+ + + +G+S + +
Sbjct: 250 ITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDV- 308
Query: 445 REANDLAVRIALGETQVIAETKKALTNAGVNVSSLEEFSAGKTDGLKRSNHVFLVKNLPY 504
+ +G Q ++ ++ L E+ + + L+ SN +KNL
Sbjct: 309 ---------LYVGRAQKKSDREEELRR------KFEQERISRFEKLQGSN--LYLKNLDD 351
Query: 505 DSSEGELAKMFGKFGSLD--KVILPS---TKTLALVVFLEPVEAAAAFKGLAYKRYKGVP 559
++ +L +MF ++G++ KV++ S ++ V + P EA A K + K P
Sbjct: 352 SVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKP 411
Query: 560 LYLEWA 565
LY+ A
Sbjct: 412 LYVALA 417
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + E L + F++ V + + D T RS G AYV +A PE ASRA+E L
Sbjct: 61 LYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAMESL 119
Query: 361 DNSIFQGRLLHVM 373
+ + + R + +M
Sbjct: 120 NYAPIRDRPIRIM 132
>gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 299 GRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIE 358
G+LFV L + E L + F K+G +SEV +V D++TKRS+G +V + PE A A+E
Sbjct: 7 GKLFVGGLSFDTEEQSLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPEDAKDAME 66
Query: 359 VLDNSIFQGRLLHVMPA 375
++ GR + V A
Sbjct: 67 AMNGKSVDGRQIRVDQA 83
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 618 LFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVETATN 677
LFV L+F T +++L + FG++ G+I V V K + + S GFGF+ F++ E A +
Sbjct: 9 LFVGGLSFDTEEQSLEQVFGKY---GQISEVVVVKDRETKR--SRGFGFVTFENPEDAKD 63
Query: 678 VCRDLQGTILDGHAL 692
+ G +DG +
Sbjct: 64 AMEAMNGKSVDGRQI 78
>gi|298706878|emb|CBJ25842.1| similar to Polyadenylate-binding protein 2 (Poly(A)-binding protein
2) (Poly(A)-binding protein II) (PABII)
(Polyadenylate-binding nuclear protein 1) (Nuclear
poly(A)-binding protein 1) [Ectocarpus siliculosus]
Length = 265
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V + Y AT DEL+ HF G ++ V I+ DK + R KG AY+ +A + + A+ L
Sbjct: 125 VYVGQVDYDATPDELQSHFEACGTINRVTILCDKFSGRPKGYAYIEFADKDGSENAL-AL 183
Query: 361 DNSIFQGRLLHVMPAR 376
DNS F+GR L V P R
Sbjct: 184 DNSPFKGRNLKVTPKR 199
>gi|443722948|gb|ELU11589.1| hypothetical protein CAPTEDRAFT_212631 [Capitella teleta]
Length = 240
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V N P++ T ++L + F K+G V +V I+ DK+T+RSKG+A+VL+ ESA + ++ +
Sbjct: 12 VYVSNFPFSLTNNDLHKIFEKYGKVVKVTILCDKNTRRSKGVAFVLFLEKESAHQCVKAM 71
Query: 361 DNSIFQGRLLHVMPA----------RHKKSSDKQELHNSTSQGTKTLK 398
+++ GR + A R K +DK + + G + K
Sbjct: 72 NSTEMFGRTIKCSIANDNGRAQDFIRRKVYTDKSKCYQCGESGHLSYK 119
>gi|425461447|ref|ZP_18840925.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
gi|389825682|emb|CCI24355.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
Length = 97
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NLP+ +D++ E F ++G + VH+ +D++T + +G A+V PE ++AI L
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAAL 62
Query: 361 DNSIFQGRLLHVMPARHK 378
D + + GR L V AR K
Sbjct: 63 DGAQWMGRELKVNQAREK 80
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 277 EIVDPGNPSSSSKDVQQEVLESG---RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVD 333
++ P P ++ ++E +S LF+ NL + TEDE+RE FS++G + V D
Sbjct: 256 DVSTPKPPRDGNRQGRKEAPQSAPTTTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTD 315
Query: 334 KDTKRSKGIAYVLYAIPESASRAIEVLDNSIFQGRLLHV 372
+DT KG YV Y E+A +A+E L+ GR L +
Sbjct: 316 RDTGAFKGFGYVEYGDVETAQKAVEGLNGVEIAGRSLRL 354
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 610 PDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEF 669
P + +LF+ NL+F ++ +R+ F ++ G+++SV+ G GFG++E+
Sbjct: 275 PQSAPTTTLFLGNLSFNVTEDEIRESFSQY---GQLVSVRFPTDRDTG--AFKGFGYVEY 329
Query: 670 DSVETATNVCRDLQGTILDGHALILQLCHAK 700
VETA L G + G +L L +
Sbjct: 330 GDVETAQKAVEGLNGVEIAGRSLRLDYAGGR 360
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+FV NL + E+ L F+ G V I+ DK+T R+KG YV + ++ + A+ L
Sbjct: 185 VFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESADALTAAM-AL 243
Query: 361 DNSIFQGRLLHV 372
+ GR + V
Sbjct: 244 TGTELDGREIRV 255
>gi|326469996|gb|EGD94005.1| hypothetical protein TESG_01534 [Trichophyton tonsurans CBS 112818]
Length = 186
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T KG AYV ++ P
Sbjct: 61 KEDIDARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSL 120
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V+P R
Sbjct: 121 VAQAL-VLNESLFRGRNIKVVPKR 143
>gi|224085260|ref|XP_002307526.1| predicted protein [Populus trichocarpa]
gi|222856975|gb|EEE94522.1| predicted protein [Populus trichocarpa]
Length = 649
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 178/414 (42%), Gaps = 65/414 (15%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
L+V +L + E +L + FS+ V + + D+ + S G AYV ++ P+ AS A+E+L
Sbjct: 35 LYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNPQDASNAMELL 94
Query: 361 DNSIFQGRLLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSL 420
+ + G+ + +M H+ S ++ H + K L + S + KA
Sbjct: 95 NFTPLNGKAIRIM-VSHRDPSMRKSGHANVF--IKNL-----------DTSIDNKALQET 140
Query: 421 FMRPDTV------VENIARKHGVSKSDLLDREANDLAVRIALGETQVIAETKKALTNAGV 474
F +V V+N + G + EA A+ G ++ K+ G
Sbjct: 141 FASFGSVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLNG---MLINDKEVFV--GR 195
Query: 475 NVSSLEEFSAGKTDGLKRSNHVFLVKNLPYDSSEGELAKMFGKFGSLDKVIL-----PST 529
V E A G + +V+ VKNL +S+ +L K F +G++ I+ +
Sbjct: 196 FVRHQERIEA---TGSPKFTNVY-VKNLSETTSDEDLKKFFSNYGAITSAIVMKDQSGKS 251
Query: 530 KTLALVVFLEPVEAAAAFKGLAYKRYKGVPLYLEWAPSDVLSQSSTSKGNQKNDAVVGEH 589
K V F P AAAA + L + Y+ A Q+ GE
Sbjct: 252 KGFGFVNFQSPDSAAAAVEKLNGTTFNDKVWYVGRA--------------QRK----GER 293
Query: 590 DAK-RALLEQQLEGVTDADIDPDRVESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSV 648
+A+ +A EQ + + +++++ +L++KNL+ K DE L++ F E G I S
Sbjct: 294 EAELKARFEQ------ERNSRYEKLKAANLYLKNLDDKIDDEKLKELFSEF---GSITSC 344
Query: 649 KVKKHLKNGKNVSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKD 702
KV + + + +S G GF+ F + E A+ + G ++ L + + +++
Sbjct: 345 KV---MLDQQGLSKGSGFVAFSTPEEASRALNGMNGKMIGKKPLYVAVAQRREE 395
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + VKNL + +++ L+ FFS G IT A +M+ + GKS+ F F+ F++ A A++
Sbjct: 212 TNVYVKNLSETTSDEDLKKFFSNYGAITSAIVMKDQSGKSKGFGFVNFQSPDSAAAAVEK 271
Query: 61 FNKSYLD 67
N + +
Sbjct: 272 LNGTTFN 278
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 289 KDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYA 348
++ + E L++ L+++NL +++L+E FS+FG+++ +++D+ SKG +V ++
Sbjct: 305 RNSRYEKLKAANLYLKNLDDKIDDEKLKELFSEFGSITSCKVMLDQQ-GLSKGSGFVAFS 363
Query: 349 IPESASRAIEVLDNSIFQGRLLHVMPARHKK 379
PE ASRA+ ++ + + L+V A+ ++
Sbjct: 364 TPEEASRALNGMNGKMIGKKPLYVAVAQRRE 394
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 1 SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 60
+ + +KNL + +++L++ FS+ G IT K+M + G S+ F+ F T +EA A+
Sbjct: 315 ANLYLKNLDDKIDDEKLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALNG 374
Query: 61 FNKSYLDTCRISCEIARK 78
N + + +A++
Sbjct: 375 MNGKMIGKKPLYVAVAQR 392
>gi|159026366|emb|CAO88917.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 97
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+FV NL Y ++++L E F +G V VHI VDKDT+R +G A+V ++AIE L
Sbjct: 3 IFVGNLSYEISQEDLVEVFQDYGKVKRVHIPVDKDTQRKRGFAFVEMEDKAQEAKAIEAL 62
Query: 361 DNSIFQGRLLHVMPARHK 378
D + + GR + V AR +
Sbjct: 63 DGADWMGRSIKVNEARDR 80
>gi|149744489|ref|XP_001493789.1| PREDICTED: putative RNA-binding protein 3-like isoform 1 [Equus
caballus]
Length = 156
Score = 63.5 bits (153), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESLDGRQIRV 79
Score = 41.6 bits (96), Expect = 1.7, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L HF ++ VK ++ + S GFGFI F + E
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQR-----SRGFGFITFTNPE 58
Query: 674 TATNVCRDLQGTILDGHAL 692
A++ R + G LDG +
Sbjct: 59 HASDAMRAMNGESLDGRQI 77
>gi|390344256|ref|XP_783689.3| PREDICTED: RNA-binding protein 28-like [Strongylocentrotus
purpuratus]
Length = 622
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 288 SKDVQQEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLY 347
S+DVQ E LF+RN+PY +T+D++R+ F+ FG + +VVD T+ S+G A+V +
Sbjct: 188 SEDVQ----EGKTLFIRNVPYDSTDDDIRDLFAPFGELEFARVVVDPMTEHSRGTAFVKF 243
Query: 348 AIPESASRAIEVLDNSIFQGRLLHVMPA 375
E A + D GRLL + PA
Sbjct: 244 KRKEDADGCLHEGDAVRLNGRLLALSPA 271
>gi|308504932|ref|XP_003114649.1| hypothetical protein CRE_28335 [Caenorhabditis remanei]
gi|308258831|gb|EFP02784.1| hypothetical protein CRE_28335 [Caenorhabditis remanei]
Length = 150
Score = 63.5 bits (153), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V N+PY TE+E+ +FS G V+ V IV D++T R +G A+V Y+ A RA+E L
Sbjct: 74 VYVGNVPYQGTEEEIGNYFSTVGIVNNVRIVYDRETGRPRGFAFVEYSEEAGAQRAVEEL 133
Query: 361 DNSIFQGRLLHV 372
+ + F GR L V
Sbjct: 134 NGAAFNGRNLRV 145
>gi|225427688|ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
Length = 972
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
+FV N PY+ T +L E FS G + +V K + +G +V +A+ E A+RAIE+
Sbjct: 21 VFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEHRGFGFVQFAVKEDANRAIELK 80
Query: 361 DNSIFQGR------LLHVMPARHKKSSDKQELHNSTSQGTKTLKQRREEERKASEAS 411
+ S GR +H P ++S + Q +H+ T+T K E K AS
Sbjct: 81 NGSSIGGRKIGVKLAMHRTPLEQRRSKENQAVHSDDIIKTRTEKDSSSEVVKQGHAS 137
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 31/185 (16%)
Query: 271 EEDANGEIVDPGNPSSSSKDVQQEVLES-----GRLFVRNLPYTATEDELREHFSKFGNV 325
E + ++ +P N SS SK + +ES +F+ NLP+ ++E+++ FSKFG V
Sbjct: 479 ESEKASDVTEPEN-SSKSKLLNLRPIESEDDLQRTIFISNLPFDIDKEEVKQQFSKFGEV 537
Query: 326 SEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVLDNS-----IFQGRLLHVMPARHKKS 380
V+ + TKR KG ++ + +A A+ + + +GR L + A KKS
Sbjct: 538 QSFVPVLHQVTKRPKGTGFLKFNTVAAADAAVSAANPTSSLGIFLKGRQLTALKALDKKS 597
Query: 381 SDKQELHNSTSQGTKTLKQRREEERKASEASGNTKAWNSLFMRPDTVVENIARKHGVSKS 440
+ +E LK+ + EER N + +VE GVS S
Sbjct: 598 AHDKE-----------LKKSKPEERDHR---------NLYLAKEGLIVEGTPAAEGVSAS 637
Query: 441 DLLDR 445
D+ R
Sbjct: 638 DMSKR 642
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 2 RICVKNLPKYVTEDRLRDFFSQKGEITDAKLMR-TKDGKSRQFAFIGFRTEQEAEEAIKY 60
++ V+NLP ++D FS G + DA + + ++ G SR FAF+ F ++Q+AE AI+
Sbjct: 283 KLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKFTSKQDAENAIQK 342
Query: 61 FNKSYLDTCRISCEIA 76
FN + I+ + A
Sbjct: 343 FNGEKIGKRPIAVDWA 358
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 300 RLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEV 359
+L VRNLP+ A E+++ FS G V + I + +T S+G A+V + + A AI+
Sbjct: 283 KLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKFTSKQDAENAIQK 342
Query: 360 LDNSIFQGRLLHV 372
+ R + V
Sbjct: 343 FNGEKIGKRPIAV 355
>gi|315039445|ref|XP_003169098.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
gi|311337519|gb|EFQ96721.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
Length = 186
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 293 QEVLESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPES 352
+E +++ +FV N+ Y A+ +E++ HF G+++ V I++DK T KG AYV ++ P
Sbjct: 61 KEDIDARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSL 120
Query: 353 ASRAIEVLDNSIFQGRLLHVMPAR 376
++A+ VL+ S+F+GR + V+P R
Sbjct: 121 VAQAL-VLNESLFRGRNIKVVPKR 143
>gi|322380256|ref|ZP_08054477.1| RNA-binding protein [Helicobacter suis HS5]
gi|321147334|gb|EFX42013.1| RNA-binding protein [Helicobacter suis HS5]
Length = 82
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 301 LFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRAIEVL 360
++V NL Y+AT ++ E FS+FG V+ V ++ D++TKR KG +V E A +AI L
Sbjct: 5 IYVGNLVYSATNQDVEELFSQFGAVNSVKLIQDRETKRPKGFGFVEME-DEGAQKAISSL 63
Query: 361 DNSIFQGRLLHVMPARHKK 379
DN+ F GR + V A +K
Sbjct: 64 DNTDFMGRTIRVTEANPRK 82
>gi|301764797|ref|XP_002917810.1| PREDICTED: putative RNA-binding protein 3-like isoform 1
[Ailuropoda melanoleuca]
Length = 156
Score = 63.5 bits (153), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 297 ESGRLFVRNLPYTATEDELREHFSKFGNVSEVHIVVDKDTKRSKGIAYVLYAIPESASRA 356
E G+LFV L + E L +HFS FG +SEV +V D++T+RS+G ++ + PE AS A
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63
Query: 357 IEVLDNSIFQGRLLHV 372
+ ++ GR + V
Sbjct: 64 MRAMNGESLDGRQIRV 79
Score = 41.6 bits (96), Expect = 1.7, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 614 ESRSLFVKNLNFKTCDENLRKHFGEHIKEGRILSVKVKKHLKNGKNVSMGFGFIEFDSVE 673
E LFV LNF T ++ L HF ++ VK ++ + S GFGFI F + E
Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQR-----SRGFGFITFTNPE 58
Query: 674 TATNVCRDLQGTILDGHAL 692
A++ R + G LDG +
Sbjct: 59 HASDAMRAMNGESLDGRQI 77
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.129 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,113,799,681
Number of Sequences: 23463169
Number of extensions: 487160424
Number of successful extensions: 4405551
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 24857
Number of HSP's successfully gapped in prelim test: 19373
Number of HSP's that attempted gapping in prelim test: 3527630
Number of HSP's gapped (non-prelim): 421982
length of query: 731
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 581
effective length of database: 8,839,720,017
effective search space: 5135877329877
effective search space used: 5135877329877
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 81 (35.8 bits)