Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>037050
MDAKKQVAGLAVVIRDWERNCVAAAINTTRFFGNVAMTQAATIEIGMQVALSVGGYSVLF
ESDSHEVVELVNNRTNSMSKIIWVIFEILEKKKNFQNFKAQHTPRSCNGIAHFLAKLVLQ
KKEIVIWLDEIPTDILYLISSSSM

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037050
        (144 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4010713531 - symbol:AT1G47497 species:3702 "Ar...   115  4.8e-07   1
TAIR|locus:2039129 - symbol:AT2G46460 species:3702 "Arabi...   111  1.3e-06   1


>TAIR|locus:4010713531 [details] [associations]
            symbol:AT1G47497 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] InterPro:IPR012337 EMBL:CP002684
            GO:GO:0003676 SUPFAM:SSF53098 eggNOG:KOG1075 EMBL:DQ487641
            IPI:IPI00846538 RefSeq:NP_001077686.1 RefSeq:NP_001185161.1
            UniGene:At.68677 UniGene:At.75553 ProteinModelPortal:Q1G3E3
            EnsemblPlants:AT1G47497.1 EnsemblPlants:AT1G47497.2 GeneID:5007784
            KEGG:ath:AT1G47497 TAIR:At1g47497 OMA:AGWVIRD PhylomeDB:Q1G3E3
            ProtClustDB:CLSN2683462 Genevestigator:Q1G3E3 Uniprot:Q1G3E3
        Length = 138

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 37/120 (30%), Positives = 52/120 (43%)

Query:    13 VIRDWERNCVAAAINTTRFFGNVAMTQAATIEIGMQVALSVGGYSVLFESDSHEVVELVN 72
             VIRD     V A   T     N   ++   + I MQ   S G   + FE D+ EV+E++N
Sbjct:     8 VIRDESGQFVGAGQATGNHTSNALESEFQALLIAMQSCWSHGHRKIWFEGDNREVMEILN 67

Query:    73 NRTNSMSKIIWVIFEILEKKKNFQNFKAQHTPRSCNGIAHFLAKLVLQKKEIVIWLDEIP 132
              R +      W I ++   K+ FQ  +     R  N  A  LAK  L + E   + D IP
Sbjct:    68 RRKSRFDTFNW-IRDVQAWKQRFQECRFTWINRKQNKPADILAKSHLPQNEQFKFYDYIP 126


>TAIR|locus:2039129 [details] [associations]
            symbol:AT2G46460 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR012337 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0003676 SUPFAM:SSF53098
            EMBL:AC006526 ProtClustDB:CLSN2683462 HOGENOM:HOG000131738
            IPI:IPI00522492 PIR:B84903 RefSeq:NP_182169.1 UniGene:At.53138
            ProteinModelPortal:Q9SKD4 EnsemblPlants:AT2G46460.1 GeneID:819255
            KEGG:ath:AT2G46460 TAIR:At2g46460 InParanoid:Q9SKD4 OMA:CNYDGSY
            PhylomeDB:Q9SKD4 Genevestigator:Q9SKD4 Uniprot:Q9SKD4
        Length = 160

 Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 36/120 (30%), Positives = 53/120 (44%)

Query:    13 VIRDWERNCVAAAINTTRFFGNVAMTQAATIEIGMQVALSVGGYSVLFESDSHEVVELVN 72
             +IRD     V+A   T     N   ++   + I MQ   S G   + FE D+ EV+E++N
Sbjct:    30 IIRDESGQFVSAGQATGNHTSNALESEFQALLITMQSCWSHGHRKIWFEGDNREVMEILN 89

Query:    73 NRTNSMSKIIWVIFEILEKKKNFQNFKAQHTPRSCNGIAHFLAKLVLQKKEIVIWLDEIP 132
              R +      W I ++   K+ FQ  +     R  N  A  LAK  L + E   + D IP
Sbjct:    90 RRKSRFDIFNW-IRDVQAWKQRFQECRFTWINRKQNKPADILAKSHLPQNEQFKFYDYIP 148


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.132   0.382    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      144       144   0.00091  102 3  11 22  0.40    31
                                                     30  0.48    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  592 (63 KB)
  Total size of DFA:  140 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:03
  No. of threads or processors used:  24
  Search cpu time:  13.75u 0.07s 13.82t   Elapsed:  00:00:08
  Total cpu time:  13.75u 0.07s 13.82t   Elapsed:  00:00:11
  Start:  Fri May 10 20:01:15 2013   End:  Fri May 10 20:01:26 2013

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