Query 037052
Match_columns 183
No_of_seqs 29 out of 31
Neff 2.2
Searched_HMMs 29240
Date Mon Mar 25 13:36:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037052.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037052hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tyy_A Putative sugar kinase; 82.4 0.085 2.9E-06 42.6 -2.8 35 128-183 26-60 (339)
2 4e69_A 2-dehydro-3-deoxyglucon 79.1 0.18 6.3E-06 40.4 -1.9 46 118-183 15-60 (328)
3 4gm6_A PFKB family carbohydrat 75.3 0.18 6.1E-06 40.3 -3.0 42 127-183 25-66 (351)
4 3hj6_A Fructokinase, FRK; fruc 75.0 0.2 7E-06 39.8 -2.7 43 127-183 22-64 (327)
5 4du5_A PFKB; structural genomi 71.4 0.26 8.9E-06 39.5 -2.9 42 127-183 27-68 (336)
6 2abs_A Adenosine kinase, AK; r 68.6 0.39 1.3E-05 39.2 -2.5 54 127-182 33-97 (383)
7 3uq6_A Adenosine kinase, putat 62.3 0.66 2.2E-05 38.0 -2.3 49 128-182 28-92 (372)
8 2rbc_A Sugar kinase, AGR_C_456 59.5 0.91 3.1E-05 36.8 -1.9 46 128-183 31-76 (343)
9 2fv7_A Ribokinase; structural 51.1 1.3 4.5E-05 35.2 -2.2 46 128-183 26-71 (331)
10 2pkf_A Adenosine kinase; trans 49.7 2.2 7.5E-05 34.1 -1.2 61 121-183 5-67 (334)
11 4e3a_A Sugar kinase protein; s 49.7 1.4 4.9E-05 35.8 -2.3 55 121-182 18-89 (352)
12 2hlz_A Ketohexokinase; non-pro 49.1 1.3 4.3E-05 35.0 -2.6 47 127-183 18-64 (312)
13 3otx_A Adenosine kinase, putat 47.9 1.5 5E-05 35.0 -2.5 48 129-182 10-73 (347)
14 3snv_A Symfoil-4T/permutation 45.6 3.5 0.00012 31.3 -0.6 37 122-158 7-43 (143)
15 3bf5_A Ribokinase related prot 43.7 1.3 4.6E-05 35.1 -3.3 48 125-183 19-66 (306)
16 3vas_A Putative adenosine kina 42.9 1.6 5.5E-05 35.7 -3.0 55 127-182 25-90 (370)
17 2ajr_A Sugar kinase, PFKB fami 42.7 1.1 3.9E-05 35.6 -3.8 48 128-183 14-61 (331)
18 1cix_A Protein (tachystatin A) 29.6 19 0.00064 23.9 1.1 24 119-142 12-35 (44)
19 2ike_A Prophenoloxidase activa 29.2 21 0.00073 22.2 1.3 8 124-131 46-53 (54)
20 2jg1_A Tagatose-6-phosphate ki 22.2 4 0.00014 32.5 -3.9 46 127-183 21-66 (330)
21 1vm7_A Ribokinase; TM0960, str 21.5 4 0.00014 32.3 -4.0 47 127-183 15-61 (311)
22 1jgn_B PAIP2, polyadenylate-bi 20.5 29 0.001 20.8 0.6 15 134-148 8-22 (26)
No 1
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=82.41 E-value=0.085 Score=42.57 Aligned_cols=35 Identities=23% Similarity=0.577 Sum_probs=29.6
Q ss_pred eeeeecCcccccccceeccCCCCChhhhhhhhhcccCCcccccCCCCCCCCccccC
Q 037052 128 LICCFGAVQKEFVPTVRVHDNQMHPDIYSTWKMVQWDPPEFVRAPGGPPSNVAISH 183 (183)
Q Consensus 128 LVCCFGaaq~eFVPtvRv~~~~m~~d~ys~wk~lqW~PpeF~RAPGg~~snVAia~ 183 (183)
-|+|+|.+-.++++.+ ..+|...+||.+.|||+++
T Consensus 26 ~ilviG~~~~D~~~~~---------------------~~~~~~~~GG~~~NvA~~l 60 (339)
T 1tyy_A 26 KVWVIGDASVDLVPEK---------------------QNSYLKCPGGASANVGVCV 60 (339)
T ss_dssp CEEEESCCEEEEEECS---------------------SSEEEEEEECHHHHHHHHH
T ss_pred CEEEECcceeEEeccC---------------------CCceEEcCCCHHHHHHHHH
Confidence 4889999999998763 5678889999999999863
No 2
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=79.11 E-value=0.18 Score=40.40 Aligned_cols=46 Identities=20% Similarity=0.179 Sum_probs=36.2
Q ss_pred CCCCCCCCCCeeeeecCcccccccceeccCCCCChhhhhhhhhcccCCcccccCCCCCCCCccccC
Q 037052 118 DMDFPFDDPPLICCFGAVQKEFVPTVRVHDNQMHPDIYSTWKMVQWDPPEFVRAPGGPPSNVAISH 183 (183)
Q Consensus 118 gidfpY~~pPLVCCFGaaq~eFVPtvRv~~~~m~~d~ys~wk~lqW~PpeF~RAPGg~~snVAia~ 183 (183)
|--|=+...+=|+|||.+-.++++. + .+..|.+.+||.+.|||+++
T Consensus 15 ~~~y~~~~m~~i~viG~~~iD~~~~--~------------------~~~~~~~~~GG~~~NvA~~l 60 (328)
T 4e69_A 15 TENLYFQSMMHILSIGECMAELAPA--D------------------LPGTYRLGFAGDTFNTAWYL 60 (328)
T ss_dssp CBCSSCBSSCEEEEESCCEEEEEEC--S------------------STTEEEEEEECHHHHHHHHH
T ss_pred ccccccccCCcEEEecCcEEEEecC--C------------------CCCceEEecCCHHHHHHHHH
Confidence 3445566778899999999999984 1 12688999999999999863
No 3
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=75.30 E-value=0.18 Score=40.26 Aligned_cols=42 Identities=14% Similarity=0.214 Sum_probs=29.2
Q ss_pred CeeeeecCcccccccceeccCCCCChhhhhhhhhcccCCcccccCCCCCCCCccccC
Q 037052 127 PLICCFGAVQKEFVPTVRVHDNQMHPDIYSTWKMVQWDPPEFVRAPGGPPSNVAISH 183 (183)
Q Consensus 127 PLVCCFGaaq~eFVPtvRv~~~~m~~d~ys~wk~lqW~PpeF~RAPGg~~snVAia~ 183 (183)
.=|.|||..--+|.|..- .+ .. .-..|.+.+||.++|||+++
T Consensus 25 ~kv~~~GE~m~~l~p~~~---~~--------~~----~~~~~~~~~GG~~aNvA~~l 66 (351)
T 4gm6_A 25 KQVVTIGELLMRLSTQQG---IP--------FS----QTTALDIHIGGAEANVAVNL 66 (351)
T ss_dssp CEEEEECCCEEEEECCTT---CC--------GG----GCSEEEEEEECHHHHHHHHH
T ss_pred CCEEEEcceeEEecCCCC---CC--------cc----ccCeEEEecCChHHHHHHHH
Confidence 348899999887776321 11 11 13578889999999999863
No 4
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=75.03 E-value=0.2 Score=39.75 Aligned_cols=43 Identities=26% Similarity=0.496 Sum_probs=32.2
Q ss_pred CeeeeecCcccccccceeccCCCCChhhhhhhhhcccCCcccccCCCCCCCCccccC
Q 037052 127 PLICCFGAVQKEFVPTVRVHDNQMHPDIYSTWKMVQWDPPEFVRAPGGPPSNVAISH 183 (183)
Q Consensus 127 PLVCCFGaaq~eFVPtvRv~~~~m~~d~ys~wk~lqW~PpeF~RAPGg~~snVAia~ 183 (183)
+=|.|+|.+-.++++.+.. .+. -....|.+.+||.+.|||+++
T Consensus 22 ~~v~viG~~~~D~~~~~~~--~p~------------~~~~~~~~~~GG~~~NvA~~l 64 (327)
T 3hj6_A 22 LDVVSLGEILVDMISTEEV--NSL------------SQSREYTRHFGGSPANIAVNL 64 (327)
T ss_dssp CCEEEESCCEEEEECCCCC--SSG------------GGCCEEEEEEECHHHHHHHHH
T ss_pred CCEEEEccceEEEeccCCC--CCc------------cccceeeeecCcHHHHHHHHH
Confidence 4589999999999876532 111 035788999999999999863
No 5
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=71.40 E-value=0.26 Score=39.53 Aligned_cols=42 Identities=21% Similarity=0.271 Sum_probs=31.2
Q ss_pred CeeeeecCcccccccceeccCCCCChhhhhhhhhcccCCcccccCCCCCCCCccccC
Q 037052 127 PLICCFGAVQKEFVPTVRVHDNQMHPDIYSTWKMVQWDPPEFVRAPGGPPSNVAISH 183 (183)
Q Consensus 127 PLVCCFGaaq~eFVPtvRv~~~~m~~d~ys~wk~lqW~PpeF~RAPGg~~snVAia~ 183 (183)
+=|+|+|.+-.++++... . ++. ...+|.+.+||.+.|||+++
T Consensus 27 ~~vlviG~~~iD~~~~~~--g-----~~~--------~~~~~~~~~GG~~~NvA~~l 68 (336)
T 4du5_A 27 LDVITFGEAMMLLVADRP--G-----PLE--------HAEAFHKRTAGAETNVAIGL 68 (336)
T ss_dssp EEEEEECCCEEEEEESSS--S-----CGG--------GCCEEEEEEECHHHHHHHHH
T ss_pred CCEEEEChhhhhccCCCC--C-----ccc--------hhhheeecCCCHHHHHHHHH
Confidence 469999999999998641 0 111 13578889999999999863
No 6
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=68.61 E-value=0.39 Score=39.20 Aligned_cols=54 Identities=17% Similarity=0.238 Sum_probs=33.6
Q ss_pred CeeeeecCcccccccceec--------cCCC---CChhhhhhhhhcccCCcccccCCCCCCCCcccc
Q 037052 127 PLICCFGAVQKEFVPTVRV--------HDNQ---MHPDIYSTWKMVQWDPPEFVRAPGGPPSNVAIS 182 (183)
Q Consensus 127 PLVCCFGaaq~eFVPtvRv--------~~~~---m~~d~ys~wk~lqW~PpeF~RAPGg~~snVAia 182 (183)
+-|+|+|.+--+++..+.- .... .+.+.......+ ...++.+.+||.+.|||++
T Consensus 33 ~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~--~~~~~~~~~GG~~~NvA~~ 97 (383)
T 2abs_A 33 MRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL--DQFNPTSLPGGSALNSVRV 97 (383)
T ss_dssp CCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTG--GGGCCEEEEESHHHHHHHH
T ss_pred ceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhh--ccccceeeCCChHHHHHHH
Confidence 3589999999999876521 1000 011112222233 4567889999999999976
No 7
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=62.33 E-value=0.66 Score=37.96 Aligned_cols=49 Identities=16% Similarity=0.214 Sum_probs=31.7
Q ss_pred eeeeecCcccccccceeccC-------------CCCC---hhhhhhhhhcccCCcccccCCCCCCCCcccc
Q 037052 128 LICCFGAVQKEFVPTVRVHD-------------NQMH---PDIYSTWKMVQWDPPEFVRAPGGPPSNVAIS 182 (183)
Q Consensus 128 LVCCFGaaq~eFVPtvRv~~-------------~~m~---~d~ys~wk~lqW~PpeF~RAPGg~~snVAia 182 (183)
+|.|+|-|=-+.+ ++|.| .+++ ..+|.++.. -.+..+.|||++.|||++
T Consensus 28 ~v~giGnalvDi~--~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~----~~~~~~~~GGsa~N~a~~ 92 (372)
T 3uq6_A 28 YVFGMGNPLLDII--VDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQK----KKKLNYIAGGATLNTVKM 92 (372)
T ss_dssp CEEEEECCEEEEE--EECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHT----SSSCEEEECCHHHHHHHH
T ss_pred eEEEECCceeeEE--EEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhc----cCCeEEeCCcHHHHHHHH
Confidence 5899998766664 34433 1233 235655543 246677899999999975
No 8
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=59.53 E-value=0.91 Score=36.80 Aligned_cols=46 Identities=20% Similarity=0.236 Sum_probs=30.6
Q ss_pred eeeeecCcccccccceeccCCCCChhhhhhhhhcccCCcccccCCCCCCCCccccC
Q 037052 128 LICCFGAVQKEFVPTVRVHDNQMHPDIYSTWKMVQWDPPEFVRAPGGPPSNVAISH 183 (183)
Q Consensus 128 LVCCFGaaq~eFVPtvRv~~~~m~~d~ys~wk~lqW~PpeF~RAPGg~~snVAia~ 183 (183)
-|+|||.+-.+++..+. +...++ + .-...+|.+.+||.+.|||+++
T Consensus 31 ~i~viG~~~iD~~~~~~---~~p~~~--~-----~~~~~~~~~~~GG~~~NvA~~l 76 (343)
T 2rbc_A 31 HVLCVGAAVLDTLFRVA---DMPKGE--G-----KVLPYEVLQIAEGMASSAAYAV 76 (343)
T ss_dssp EEEEESCCEEEEEEECS---SCCCSS--S-----CCCCSEEEEEEECHHHHHHHHH
T ss_pred eEEEECcceEEEEeecC---CCCCCC--C-----eEeeeeeEEcCCcHHHHHHHHH
Confidence 48899999999886541 111100 0 1134578899999999999863
No 9
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=51.13 E-value=1.3 Score=35.25 Aligned_cols=46 Identities=13% Similarity=0.216 Sum_probs=30.1
Q ss_pred eeeeecCcccccccceeccCCCCChhhhhhhhhcccCCcccccCCCCCCCCccccC
Q 037052 128 LICCFGAVQKEFVPTVRVHDNQMHPDIYSTWKMVQWDPPEFVRAPGGPPSNVAISH 183 (183)
Q Consensus 128 LVCCFGaaq~eFVPtvRv~~~~m~~d~ys~wk~lqW~PpeF~RAPGg~~snVAia~ 183 (183)
-|+|||.+-.+++..+ ++.-.+. + .. .-.+|.+.+||.+.|||+++
T Consensus 26 ~vlviG~~~iD~~~~~---~~~p~~g--~----~~-~~~~~~~~~GG~~~NvA~~l 71 (331)
T 2fv7_A 26 AVVVVGSCMTDLVSLT---SRLPKTG--E----TI-HGHKFFIGFGGKGANQCVQA 71 (331)
T ss_dssp SEEEECCCEEEEEEEC---SSCCCTT--C----CC-CCSEEEEEEECHHHHHHHHH
T ss_pred CEEEECcccEEEEEec---CCCCCCC--c----eE-ecCceEECcCCHHHHHHHHH
Confidence 4889999999998764 1110110 0 00 12467888999999999863
No 10
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=49.73 E-value=2.2 Score=34.12 Aligned_cols=61 Identities=15% Similarity=0.179 Sum_probs=33.7
Q ss_pred CCCCCCCeeeeecCcccccccceeccCCCCChhhhhhhhhc--ccCCcccccCCCCCCCCccccC
Q 037052 121 FPFDDPPLICCFGAVQKEFVPTVRVHDNQMHPDIYSTWKMV--QWDPPEFVRAPGGPPSNVAISH 183 (183)
Q Consensus 121 fpY~~pPLVCCFGaaq~eFVPtvRv~~~~m~~d~ys~wk~l--qW~PpeF~RAPGg~~snVAia~ 183 (183)
+.++-.--|+|+|.+-.+++..+. +.-++.=+..++-.. .-....|.+.+||.+.|||+++
T Consensus 5 ~~~~~~m~i~v~G~~~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~l 67 (334)
T 2pkf_A 5 LYFQSHMTIAVTGSIATDHLMRFP--GRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAI 67 (334)
T ss_dssp SSSCCSSEEEEESCCEEEEEEECS--SCTHHHHTTSCGGGCCCCCCCSEEEEEEECHHHHHHHHH
T ss_pred ccCccCCeEEEECChhheEEEecC--hHHhhhhchhhccccccccccccceecCCChHHHHHHHH
Confidence 334443469999999999986541 110000000111000 0012567788999999999863
No 11
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=49.68 E-value=1.4 Score=35.78 Aligned_cols=55 Identities=18% Similarity=0.269 Sum_probs=32.7
Q ss_pred CCCCC--CCeeeeecCcccccccceec-----------cCCCCChh----hhhhhhhcccCCcccccCCCCCCCCcccc
Q 037052 121 FPFDD--PPLICCFGAVQKEFVPTVRV-----------HDNQMHPD----IYSTWKMVQWDPPEFVRAPGGPPSNVAIS 182 (183)
Q Consensus 121 fpY~~--pPLVCCFGaaq~eFVPtvRv-----------~~~~m~~d----~ys~wk~lqW~PpeF~RAPGg~~snVAia 182 (183)
|++.. .+=|+|+|.+--+.+=.|-- ...++++| +|.++. .+.+.+||.+.|||++
T Consensus 18 ~~~~~m~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~-------~~~~~~GG~~~N~A~~ 89 (352)
T 4e3a_A 18 LYFQSMTRFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMG-------PALEASGGSAGNTAAG 89 (352)
T ss_dssp -----CCSEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSC-------SCEEEECCHHHHHHHH
T ss_pred cCHhHCCcccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhh-------hccEecCCHHHHHHHH
Confidence 44444 45699999998887543311 11334443 455443 4567899999999986
No 12
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=49.14 E-value=1.3 Score=35.05 Aligned_cols=47 Identities=23% Similarity=0.229 Sum_probs=30.0
Q ss_pred CeeeeecCcccccccceeccCCCCChhhhhhhhhcccCCcccccCCCCCCCCccccC
Q 037052 127 PLICCFGAVQKEFVPTVRVHDNQMHPDIYSTWKMVQWDPPEFVRAPGGPPSNVAISH 183 (183)
Q Consensus 127 PLVCCFGaaq~eFVPtvRv~~~~m~~d~ys~wk~lqW~PpeF~RAPGg~~snVAia~ 183 (183)
+-|+|+|.+-.+++..+. +...++ + .. ...++.+.+||.+.|||+++
T Consensus 18 ~~i~viG~~~iD~~~~~~---~~p~~~--~---~~--~~~~~~~~~GG~~~NvA~~l 64 (312)
T 2hlz_A 18 SQILCVGLVVLDVISLVD---KYPKED--S---EI--RCLSQRWQRGGNASNSCTIL 64 (312)
T ss_dssp CEEEEESCCEEEEEEEES---SCCCTT--C---EE--ECSEEEEEEESHHHHHHHHH
T ss_pred CcEEEECcceEEEeeccc---cCCCcc--c---ee--ecccceeccCccHHHHHHHH
Confidence 358999999999986542 211111 0 00 12356678999999999863
No 13
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=47.86 E-value=1.5 Score=35.01 Aligned_cols=48 Identities=21% Similarity=0.247 Sum_probs=30.4
Q ss_pred eeeecCcccccccceeccC-------------CCCC---hhhhhhhhhcccCCcccccCCCCCCCCcccc
Q 037052 129 ICCFGAVQKEFVPTVRVHD-------------NQMH---PDIYSTWKMVQWDPPEFVRAPGGPPSNVAIS 182 (183)
Q Consensus 129 VCCFGaaq~eFVPtvRv~~-------------~~m~---~d~ys~wk~lqW~PpeF~RAPGg~~snVAia 182 (183)
|.|+|.+--+.+=.| .+ .+++ ..+|.+.- ....+.+.+||.+.|||++
T Consensus 10 v~~iG~~~lD~~~~v--~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~----~~~~~~~~~GG~~~N~a~~ 73 (347)
T 3otx_A 10 VYVQCNPLLDVSAHV--SDEFLVKYGLERGTAILLSERQKGIFDDIE----KMPNVRYVPGGSGLNVARV 73 (347)
T ss_dssp EEEECCCEEEEEEEC--CHHHHHHTTCCTTCEEECCGGGTTHHHHHH----TSTTCEEEECCHHHHHHHH
T ss_pred EEEECCceeeEEEec--CHHHHHHcCCCCCceEEcCHHHHHHHHHHh----ccCCeEEecCCHHHHHHHH
Confidence 778898887776443 21 2333 22333322 2347889999999999985
No 14
>3snv_A Symfoil-4T/permutation #1 synthetic protein; beta-trefoil, de novo protein; 2.20A {Homo sapiens}
Probab=45.55 E-value=3.5 Score=31.33 Aligned_cols=37 Identities=19% Similarity=0.166 Sum_probs=19.4
Q ss_pred CCCCCCeeeeecCcccccccceeccCCCCChhhhhhh
Q 037052 122 PFDDPPLICCFGAVQKEFVPTVRVHDNQMHPDIYSTW 158 (183)
Q Consensus 122 pY~~pPLVCCFGaaq~eFVPtvRv~~~~m~~d~ys~w 158 (183)
-|..|||.||=+--.=+.-|.++|.-..-+.+.|+.|
T Consensus 7 ~~~~~~~~~~~~g~~LqI~~dG~V~Gt~~~~~~~s~l 43 (143)
T 3snv_A 7 HFNLPPGNYKKGGQYLRINPDGTVDGTRDRSDTHIQF 43 (143)
T ss_dssp ------------CCEEEECTTSBEEEESCTTCTTSEE
T ss_pred ccCCCcEeEEcCCEEEEECCCCCEeeecCCCCCceEE
Confidence 4688999999987777777999998877667788755
No 15
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=43.71 E-value=1.3 Score=35.13 Aligned_cols=48 Identities=17% Similarity=0.257 Sum_probs=31.4
Q ss_pred CCCeeeeecCcccccccceeccCCCCChhhhhhhhhcccCCcccccCCCCCCCCccccC
Q 037052 125 DPPLICCFGAVQKEFVPTVRVHDNQMHPDIYSTWKMVQWDPPEFVRAPGGPPSNVAISH 183 (183)
Q Consensus 125 ~pPLVCCFGaaq~eFVPtvRv~~~~m~~d~ys~wk~lqW~PpeF~RAPGg~~snVAia~ 183 (183)
-.+-|.|+|.+-.+++..+. .-+ ++ + .. .-.+|.+.+||.+.|||+++
T Consensus 19 ~~~~v~viG~~~iD~~~~~~--~~p--~g---~---~~-~~~~~~~~~GG~~~NvA~~l 66 (306)
T 3bf5_A 19 GMRFLAYFGHLNIDVLISVD--SIP--RE---G---SV-NVKDLRPRFGGTAGNFAIVA 66 (306)
T ss_dssp CCEEEEEECCCEEEEEEECS--CCC--SS---E---EE-ECSEEEEEEEHHHHHHHHHH
T ss_pred CCCcEEEECCceEEEEEecC--CCC--CC---c---eE-ECcceEecCCChHHHHHHHH
Confidence 45679999999999987541 111 10 0 00 01357788999999999863
No 16
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=42.86 E-value=1.6 Score=35.74 Aligned_cols=55 Identities=9% Similarity=0.064 Sum_probs=34.9
Q ss_pred CeeeeecCcccccccceec-----------cCCCCChhhhhhhhhcccCCcccccCCCCCCCCcccc
Q 037052 127 PLICCFGAVQKEFVPTVRV-----------HDNQMHPDIYSTWKMVQWDPPEFVRAPGGPPSNVAIS 182 (183)
Q Consensus 127 PLVCCFGaaq~eFVPtvRv-----------~~~~m~~d~ys~wk~lqW~PpeF~RAPGg~~snVAia 182 (183)
.-|+|+|.+--+.+-.|-- ...+++.+.+-..-.+.+. .++.+.+||.+.|||++
T Consensus 25 ~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~-~~~~~~~GG~~~N~A~~ 90 (370)
T 3vas_A 25 GYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKK-KKLNYIAGGATLNTVKM 90 (370)
T ss_dssp TCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTS-SSCEEEEECHHHHHHHH
T ss_pred ccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhc-CCeEEecCCHHHHHHHH
Confidence 3489999998888755431 0123333334333344432 46888999999999976
No 17
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=42.68 E-value=1.1 Score=35.64 Aligned_cols=48 Identities=19% Similarity=0.112 Sum_probs=31.2
Q ss_pred eeeeecCcccccccceeccCCCCChhhhhhhhhcccCCcccccCCCCCCCCccccC
Q 037052 128 LICCFGAVQKEFVPTVRVHDNQMHPDIYSTWKMVQWDPPEFVRAPGGPPSNVAISH 183 (183)
Q Consensus 128 LVCCFGaaq~eFVPtvRv~~~~m~~d~ys~wk~lqW~PpeF~RAPGg~~snVAia~ 183 (183)
.|+|+|.+--+.+-. +..-.....+... +|.+|.+.+||.+.|||+++
T Consensus 14 ~~~v~G~~~vD~~~~--~~~~~~g~~~~~s------~~~~~~~~~GG~~~NvA~~l 61 (331)
T 2ajr_A 14 VLTVTLNPALDREIF--IEDFQVNRLYRIN------DLSKTQMSPGGKGINVSIAL 61 (331)
T ss_dssp EEEEESSCEEEEEEE--CTTCCSSCEEECC------SGGGEEEEEESHHHHHHHHH
T ss_pred EEEEecchHHeEEEE--cCCccCCceEEec------cccceEEecCcHHHHHHHHH
Confidence 578888888777533 3221122222111 77889999999999999863
No 18
>1cix_A Protein (tachystatin A); antimicrobial peptide, chitin-binding peptide; NMR {Tachypleus tridentatus} SCOP: g.3.6.2
Probab=29.63 E-value=19 Score=23.91 Aligned_cols=24 Identities=21% Similarity=0.589 Sum_probs=19.7
Q ss_pred CCCCCCCCCeeeeecCcccccccc
Q 037052 119 MDFPFDDPPLICCFGAVQKEFVPT 142 (183)
Q Consensus 119 idfpY~~pPLVCCFGaaq~eFVPt 142 (183)
+-+.|+.|-.-||||.--....|.
T Consensus 12 ~v~s~glpt~~cc~g~~cr~~fpg 35 (44)
T 1cix_A 12 VVRSYGLPTIPCCRGLTCRSYFPG 35 (44)
T ss_dssp CSCCTTSCSCCCCTTCEEEESSTT
T ss_pred EEEeCCCCCcceecceEEcccCCC
Confidence 457899999999999987777664
No 19
>2ike_A Prophenoloxidase activating proteinase-2; beta-sheet, double helix, hydrolase; NMR {Manduca sexta}
Probab=29.24 E-value=21 Score=22.25 Aligned_cols=8 Identities=25% Similarity=1.016 Sum_probs=6.7
Q ss_pred CCCCeeee
Q 037052 124 DDPPLICC 131 (183)
Q Consensus 124 ~~pPLVCC 131 (183)
+..|||||
T Consensus 46 ~~~~~VCC 53 (54)
T 2ike_A 46 PEDNSVCC 53 (54)
T ss_dssp SCSSEEEE
T ss_pred CCCCeEeC
Confidence 56799999
No 20
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=22.17 E-value=4 Score=32.50 Aligned_cols=46 Identities=15% Similarity=0.064 Sum_probs=29.3
Q ss_pred CeeeeecCcccccccceeccCCCCChhhhhhhhhcccCCcccccCCCCCCCCccccC
Q 037052 127 PLICCFGAVQKEFVPTVRVHDNQMHPDIYSTWKMVQWDPPEFVRAPGGPPSNVAISH 183 (183)
Q Consensus 127 PLVCCFGaaq~eFVPtvRv~~~~m~~d~ys~wk~lqW~PpeF~RAPGg~~snVAia~ 183 (183)
=+|+|.|.+-.+++-.+ .. + .+. .... -.+|.+.+||.+.|||+++
T Consensus 21 Mi~~v~G~~~~D~~~~~--~~-~-~~g------~~~~-~~~~~~~~GG~~~NvA~~l 66 (330)
T 2jg1_A 21 MILTLTLNPSVDISYPL--TA-L-KLD------DVNR-VQEVSKTAGGKGLNVTRVL 66 (330)
T ss_dssp CEEEEESSCEEEEEEEE--SC-C-CTT------SEEE-ESCCEEEEECHHHHHHHHH
T ss_pred EEEEEecchhheEEEec--CC-c-cCC------ceEE-eceEEEcCCchHHHHHHHH
Confidence 37889999988887543 21 1 111 0000 1467788999999999863
No 21
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=21.55 E-value=4 Score=32.26 Aligned_cols=47 Identities=26% Similarity=0.313 Sum_probs=30.0
Q ss_pred CeeeeecCcccccccceeccCCCCChhhhhhhhhcccCCcccccCCCCCCCCccccC
Q 037052 127 PLICCFGAVQKEFVPTVRVHDNQMHPDIYSTWKMVQWDPPEFVRAPGGPPSNVAISH 183 (183)
Q Consensus 127 PLVCCFGaaq~eFVPtvRv~~~~m~~d~ys~wk~lqW~PpeF~RAPGg~~snVAia~ 183 (183)
+=|+|+|.+--+++-. +. +.-.+.- ... ..+|.+.+||.+.|||+++
T Consensus 15 ~~v~vvG~~~iD~~~~--~~-~~p~~g~------~~~-~~~~~~~~GG~~~NvA~~l 61 (311)
T 1vm7_A 15 LVISVVGSSNIDIVLK--VD-HFTKPGE------TQK-AIEMNVFPGGKGANQAVTV 61 (311)
T ss_dssp CCEEEECCCEEEEEEE--CS-SCCCTTC------EEE-CSEEEEEEECHHHHHHHHH
T ss_pred CCEEEECcceeeEEEe--cc-cCCCCCc------eEe-cCeeeecCCCHHHHHHHHH
Confidence 3478899998887643 22 2211111 111 3578899999999999863
No 22
>1jgn_B PAIP2, polyadenylate-binding protein-interacting protein 2; all-helical domain, protein-peptide complex, RNA binding protein; NMR {Homo sapiens}
Probab=20.54 E-value=29 Score=20.80 Aligned_cols=15 Identities=40% Similarity=0.547 Sum_probs=11.5
Q ss_pred CcccccccceeccCC
Q 037052 134 AVQKEFVPTVRVHDN 148 (183)
Q Consensus 134 aaq~eFVPtvRv~~~ 148 (183)
...+||||.|...|-
T Consensus 8 p~akef~pgvkygni 22 (26)
T 1jgn_B 8 PNAKEFVPGVKYGNI 22 (26)
T ss_dssp TTCCCCCTTSCTTCC
T ss_pred cchhhcCCCceecce
Confidence 456899999987764
Done!