Query 037052
Match_columns 183
No_of_seqs 29 out of 31
Neff 2.2
Searched_HMMs 13730
Date Mon Mar 25 13:36:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037052.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037052hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2absa1 c.72.1.1 (A:10-359) Ad 66.4 0.19 1.4E-05 37.1 -2.7 53 128-182 5-68 (350)
2 d1bx4a_ c.72.1.1 (A:) Adenosin 34.1 0.83 6E-05 33.4 -3.9 18 165-182 52-69 (342)
3 d2bepa1 d.20.1.1 (A:1-154) Ubi 31.5 23 0.0017 24.5 3.8 47 112-166 48-103 (154)
4 d1o9aa1 g.27.1.1 (A:17-60) Fib 28.8 9.4 0.00068 23.9 1.1 15 122-136 21-36 (44)
5 d1pzva_ d.20.1.1 (A:) Ubiquiti 28.6 12 0.00086 26.2 1.8 49 119-168 58-111 (161)
6 d1eyoa_ g.3.6.1 (A:) Conotoxin 26.5 6.7 0.00049 22.7 0.1 10 126-135 9-18 (30)
7 d1b3aa_ d.9.1.1 (A:) RANTES (r 22.5 20 0.0015 22.4 1.9 23 122-145 1-23 (67)
8 d2z5da1 d.20.1.1 (A:23-174) Ub 16.6 70 0.0051 21.8 3.9 48 112-167 40-96 (152)
9 d1z2ua1 d.20.1.1 (A:1-147) Ubi 15.1 69 0.005 21.4 3.4 48 112-168 42-98 (147)
10 d1fyhb1 b.1.2.1 (B:12-109) Int 14.5 13 0.00098 22.3 -0.5 16 160-178 17-32 (98)
No 1
>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]}
Probab=66.38 E-value=0.19 Score=37.07 Aligned_cols=53 Identities=17% Similarity=0.260 Sum_probs=29.7
Q ss_pred eeeeecCccccccccee--------cc---CCCCChhhhhhhhhcccCCcccccCCCCCCCCcccc
Q 037052 128 LICCFGAVQKEFVPTVR--------VH---DNQMHPDIYSTWKMVQWDPPEFVRAPGGPPSNVAIS 182 (183)
Q Consensus 128 LVCCFGaaq~eFVPtvR--------v~---~~~m~~d~ys~wk~lqW~PpeF~RAPGg~~snVAia 182 (183)
=|.|+|.+--+++-.|- .. -.+.++|....+..+ ...+....|||.+.|||++
T Consensus 5 kil~iG~~~vD~~~~v~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~GG~~~N~a~~ 68 (350)
T d2absa1 5 RVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL--DQFNPTSLPGGSALNSVRV 68 (350)
T ss_dssp CEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTG--GGGCCEEEEESHHHHHHHH
T ss_pred EEEEECCceEEEEEEeCHHHHHHcCCCCCcceecCHHHHHHHHhh--hccCceEecCcHHHHHHHH
Confidence 47899988777643220 00 122344433333333 1234556689999999875
No 2
>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.05 E-value=0.83 Score=33.43 Aligned_cols=18 Identities=17% Similarity=0.104 Sum_probs=15.0
Q ss_pred CcccccCCCCCCCCcccc
Q 037052 165 PPEFVRAPGGPPSNVAIS 182 (183)
Q Consensus 165 PpeF~RAPGg~~snVAia 182 (183)
..++.+.+||++.|||++
T Consensus 52 ~~~~~~~~GG~~~N~a~~ 69 (342)
T d1bx4a_ 52 KFKVEYHAGGSTQNSIKV 69 (342)
T ss_dssp HSCCEEEEECHHHHHHHH
T ss_pred ccceEEeCCcHHHHHHHH
Confidence 467888999999998764
No 3
>d2bepa1 d.20.1.1 (A:1-154) Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=31.50 E-value=23 Score=24.53 Aligned_cols=47 Identities=21% Similarity=0.543 Sum_probs=28.5
Q ss_pred ccCCCCCC---------CCCCCCCCeeeeecCcccccccceeccCCCCChhhhhhhhhcccCCc
Q 037052 112 VLDYDDDM---------DFPFDDPPLICCFGAVQKEFVPTVRVHDNQMHPDIYSTWKMVQWDPP 166 (183)
Q Consensus 112 ~~d~ddgi---------dfpY~~pPLVCCFGaaq~eFVPtvRv~~~~m~~d~ys~wk~lqW~Pp 166 (183)
+.-|.+|+ +||+. ||.|.|-... |=|-|-..+..+..++..+ .|+|.
T Consensus 48 ~tpy~gg~f~~~i~fp~~YP~~-pP~v~f~t~i---~Hpni~~~~g~ic~~~~~~----~W~p~ 103 (154)
T d2bepa1 48 DTPYEGGRYQLEIKIPETYPFN-PPKVRFITKI---WHPNISSVTGAICLDILKD----QWAAA 103 (154)
T ss_dssp TSTTTTCEEEEEEECCTTTTSS-CCEEEESSCC---CBTTBCTTTCBBCCGGGTT----TCCTT
T ss_pred cccccCCeeEEEEeccccccCC-CCcceecccC---CCCCeeCCCCccccccccc----cCCCc
Confidence 34577774 78875 8888776554 4455555555555555543 37663
No 4
>d1o9aa1 g.27.1.1 (A:17-60) Fibronectin {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.77 E-value=9.4 Score=23.86 Aligned_cols=15 Identities=27% Similarity=0.966 Sum_probs=11.3
Q ss_pred CCCCCCeee-eecCcc
Q 037052 122 PFDDPPLIC-CFGAVQ 136 (183)
Q Consensus 122 pY~~pPLVC-CFGaaq 136 (183)
+|----||| |||..|
T Consensus 21 ~YlGs~l~CTC~Gg~~ 36 (44)
T d1o9aa1 21 TYLGNALVCTCYGGSR 36 (44)
T ss_dssp EETTEEEEEEECSSTT
T ss_pred hhcCCeEEEEEccCcc
Confidence 455567888 999886
No 5
>d1pzva_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-19 kDa [TaxId: 6239]}
Probab=28.58 E-value=12 Score=26.22 Aligned_cols=49 Identities=18% Similarity=0.331 Sum_probs=23.8
Q ss_pred CCCCCCCCCeeeeecCcccccc-cceeccCCCCChhhhhhhhhc----ccCCccc
Q 037052 119 MDFPFDDPPLICCFGAVQKEFV-PTVRVHDNQMHPDIYSTWKMV----QWDPPEF 168 (183)
Q Consensus 119 idfpY~~pPLVCCFGaaq~eFV-PtvRv~~~~m~~d~ys~wk~l----qW~PpeF 168 (183)
-+|||. ||.|.|-....|--| ..|+++-..++.+.-.+|.+. .|+|.--
T Consensus 58 ~~YP~~-pP~v~f~t~i~HPnI~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~~ 111 (161)
T d1pzva_ 58 RDYPQK-PPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHT 111 (161)
T ss_dssp TTGGGS-CCEEEECSCCCCTTBCTTSBBCCGGGCCC---------CCSSCCTTCC
T ss_pred CCCCCC-CCeEEecCCCCCcccCCCCccchhhcCCcccccccccccccccCcccc
Confidence 367764 888887655443222 345555555555444445432 4887543
No 6
>d1eyoa_ g.3.6.1 (A:) Conotoxin {Conus tulipa, T VIIa [TaxId: 6495]}
Probab=26.47 E-value=6.7 Score=22.72 Aligned_cols=10 Identities=40% Similarity=1.228 Sum_probs=7.3
Q ss_pred CCeeeeecCc
Q 037052 126 PPLICCFGAV 135 (183)
Q Consensus 126 pPLVCCFGaa 135 (183)
=|-|||.|.-
T Consensus 9 cppvccmglm 18 (30)
T d1eyoa_ 9 CPPVCCMGLM 18 (30)
T ss_dssp CSSSBCTTBC
T ss_pred CCceeEeeee
Confidence 4668999863
No 7
>d1b3aa_ d.9.1.1 (A:) RANTES (regulated upon activation, normal T-cell expressed and secreted) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.47 E-value=20 Score=22.41 Aligned_cols=23 Identities=22% Similarity=0.758 Sum_probs=16.4
Q ss_pred CCCCCCeeeeecCcccccccceec
Q 037052 122 PFDDPPLICCFGAVQKEFVPTVRV 145 (183)
Q Consensus 122 pY~~pPLVCCFGaaq~eFVPtvRv 145 (183)
||+--++-|||+..++ .||--++
T Consensus 1 p~~~~~~~CC~~~~~~-~Ip~~~I 23 (67)
T d1b3aa_ 1 PYSSDTTPCCFAYIAR-PLPRAHI 23 (67)
T ss_dssp CCCCBCEEEESCCCSS-CCCGGGE
T ss_pred CCCCCCCCccCcccCC-cCChhHe
Confidence 6777889999987654 5664433
No 8
>d2z5da1 d.20.1.1 (A:23-174) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 H [TaxId: 9606]}
Probab=16.57 E-value=70 Score=21.84 Aligned_cols=48 Identities=21% Similarity=0.434 Sum_probs=29.6
Q ss_pred ccCCCCC---------CCCCCCCCCeeeeecCcccccccceeccCCCCChhhhhhhhhcccCCcc
Q 037052 112 VLDYDDD---------MDFPFDDPPLICCFGAVQKEFVPTVRVHDNQMHPDIYSTWKMVQWDPPE 167 (183)
Q Consensus 112 ~~d~ddg---------idfpY~~pPLVCCFGaaq~eFVPtvRv~~~~m~~d~ys~wk~lqW~Ppe 167 (183)
+.-|.+| -|||+ -||.|.|-- .=|=|-|-..+..++.++..+ .|+|..
T Consensus 40 ~TpY~gg~f~~~i~fp~~YP~-~pP~v~F~t---~i~HPnI~~~~g~~c~~~l~~----~W~p~~ 96 (152)
T d2z5da1 40 GTPYEGGVWKVRVDLPDKYPF-KSPSIGFMN---KIFHPNIDEASGTVCLDVINQ----TWTALY 96 (152)
T ss_dssp TSTTTTCEEEEEEECCTTTTT-SCCEEEESS---CCCBTTBCTTTCBBCHHHHHH----HCCTTC
T ss_pred CCCcCCCEEEEEEEecCCCCC-CCceeeecc---cCCCCCCcCCcceeeeccccc----ccCCCC
Confidence 4557777 36776 478887643 335566655566677776643 377653
No 9
>d1z2ua1 d.20.1.1 (A:1-147) Ubiquitin conjugating enzyme, UBC {Caenorhabditis elegans, E2 2 [TaxId: 6239]}
Probab=15.07 E-value=69 Score=21.37 Aligned_cols=48 Identities=23% Similarity=0.559 Sum_probs=27.2
Q ss_pred ccCCCCC---------CCCCCCCCCeeeeecCcccccccceeccCCCCChhhhhhhhhcccCCccc
Q 037052 112 VLDYDDD---------MDFPFDDPPLICCFGAVQKEFVPTVRVHDNQMHPDIYSTWKMVQWDPPEF 168 (183)
Q Consensus 112 ~~d~ddg---------idfpY~~pPLVCCFGaaq~eFVPtvRv~~~~m~~d~ys~wk~lqW~PpeF 168 (183)
+.-|.+| -|||+. ||-|.|...-.| |-|- .+-.|--++..+| |+|---
T Consensus 42 ~t~y~gg~f~~~i~fp~~YP~~-pP~v~f~t~i~H---PnV~-~~G~iCl~~l~~~----w~p~~~ 98 (147)
T d1z2ua1 42 ESPYQGGVFFLTIHFPTDYPFK-PPKVAFTTRIYH---PNIN-SNGSICLDILRSQ----WSPALT 98 (147)
T ss_dssp TSTTTTCEEEEEEECCTTTTSS-CCEEEESSCCCB---TTBC-TTCBBCCGGGTTT----CCTTCC
T ss_pred CCCcCCCceEEEEecCcCCCCC-CceEEEecCCce---eeEC-CCCCEeeehhccc----CCCCCC
Confidence 3456666 367765 788887765544 3332 2333444555554 777543
No 10
>d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.46 E-value=13 Score=22.27 Aligned_cols=16 Identities=25% Similarity=0.490 Sum_probs=10.9
Q ss_pred hcccCCcccccCCCCCCCC
Q 037052 160 MVQWDPPEFVRAPGGPPSN 178 (183)
Q Consensus 160 ~lqW~PpeF~RAPGg~~sn 178 (183)
-|.|+||+. .||+.-.
T Consensus 17 ~L~W~pP~~---~g~~~~~ 32 (98)
T d1fyhb1 17 IVYWEYQIM---PQVPVFT 32 (98)
T ss_dssp EEEEECCCC---SSCCEEE
T ss_pred EEEECCCCC---CCCCcee
Confidence 489999876 5665433
Done!