Query 037054
Match_columns 508
No_of_seqs 33 out of 35
Neff 2.6
Searched_HMMs 29240
Date Mon Mar 25 13:37:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037054.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037054hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wj5_A Heat shock protein beta 99.2 9E-11 3.1E-15 97.0 10.2 87 369-477 2-89 (101)
2 4fei_A Heat shock protein-rela 99.2 1.3E-10 4.3E-15 95.7 10.9 92 365-477 3-95 (102)
3 3gla_A Low molecular weight he 99.1 3.7E-10 1.2E-14 91.6 11.2 92 369-476 5-97 (100)
4 4eld_A MJ16.5-P1, small heat s 99.1 5.3E-10 1.8E-14 98.5 11.2 90 371-476 59-150 (161)
5 3l1e_A Alpha-crystallin A chai 99.1 7.9E-10 2.7E-14 92.2 11.6 90 368-479 2-92 (106)
6 1gme_A Heat shock protein 16.9 99.0 2.3E-09 7.9E-14 94.3 10.2 99 365-478 40-139 (151)
7 2klr_A Alpha-crystallin B chai 98.9 2.6E-09 9E-14 97.1 9.8 98 368-487 63-161 (175)
8 3q9p_A Heat shock protein beta 98.9 9.4E-09 3.2E-13 82.6 9.5 82 373-476 2-84 (85)
9 2y1y_A Alpha-crystallin B chai 98.9 1.5E-08 5E-13 81.9 10.1 81 375-477 3-84 (90)
10 3aab_A Putative uncharacterize 98.8 2E-08 7E-13 84.8 10.7 90 369-477 25-116 (123)
11 2bol_A TSP36, small heat shock 98.6 3.2E-07 1.1E-11 90.4 11.3 107 367-496 97-212 (314)
12 2bol_A TSP36, small heat shock 98.0 1.1E-05 3.6E-10 79.6 7.9 86 371-476 223-313 (314)
13 2xcm_C SGT1-like protein, cyto 94.3 0.28 9.5E-06 38.4 9.0 77 370-477 4-81 (92)
14 1rl1_A Suppressor of G2 allele 93.6 0.35 1.2E-05 39.7 8.7 77 370-477 11-88 (114)
15 2k8q_A Protein SHQ1; beta-sand 75.0 7.1 0.00024 34.9 6.9 49 422-479 35-84 (134)
16 3eud_A Protein SHQ1; CS domain 65.9 19 0.00064 31.8 7.4 76 395-479 19-98 (115)
17 1f35_A Olfactory marker protei 47.4 19 0.00063 33.2 4.3 57 383-446 51-109 (162)
18 3igf_A ALL4481 protein; two-do 45.6 28 0.00096 34.7 5.7 70 371-474 298-367 (374)
19 1zo2_A NTF2, nuclear transport 31.1 49 0.0017 28.1 4.2 59 366-430 49-110 (129)
20 1gy6_A Nuclear transport facto 30.4 58 0.002 27.5 4.5 47 384-430 57-106 (127)
21 3q90_A RAS GTPase-activating p 21.7 97 0.0033 26.6 4.4 59 366-430 55-116 (140)
22 3nv0_B NTF2-related export pro 20.9 1E+02 0.0035 27.3 4.5 59 366-430 71-137 (154)
23 1wh0_A Ubiquitin carboxyl-term 20.6 2.6E+02 0.009 24.1 7.0 38 436-476 72-110 (134)
No 1
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.19 E-value=9e-11 Score=97.01 Aligned_cols=87 Identities=20% Similarity=0.229 Sum_probs=72.0
Q ss_pred eeEEEEecCceEEEEEecCccccCceeEEEEeccCCceEEEEEEecCCcceeeeecceeeecCCCCCCCCCCceeEEeeC
Q 037054 369 AAKTIYEDDEGFLIIISLPFADLQRVKVTWRNTPTHGIVKVSCVSTARMPLIKRQDRTFKLTDPTPEHCPPGEFIREIPL 448 (508)
Q Consensus 369 gak~IyEde~gYLi~VSLPfVd~~~vkvSwrnt~t~GiVkIscvST~~~p~IkRhdRtFkl~dps~ehCPPGeF~rei~L 448 (508)
|++||+|++++|.+.+.|||++.+.++|+.. +|.+.|+|-..... .+..|... ||.|+|+|
T Consensus 2 ~~vdi~e~~~~~~v~~dlPG~~~edI~V~v~----~~~L~I~g~~~~~~-----~~~~~~~~----------eF~R~~~L 62 (101)
T 2wj5_A 2 AMAQVPTDPGYFSVLLDVKHFSPEEISVKVV----GDHVEVHARHEERP-----DEHGFIAR----------EFHRRYRL 62 (101)
T ss_dssp CCCCCCCCSSCEEEEEECTTSCGGGEEEEEE----TTEEEEEEEEEECS-----STTCCEEE----------EEEEEEEC
T ss_pred CcEEEEEeCCEEEEEEECCCCcHHHeEEEEE----CCEEEEEEEEeccc-----CCCCEEEE----------EEEEEEEC
Confidence 7899999999999999999999999999987 68999999865311 11122211 39999999
Q ss_pred CCCCCCCccc-ccccCCCCceEEEEeecCC
Q 037054 449 PNRIPEDAKL-EAYRDETGAMLEIIVPKHR 477 (508)
Q Consensus 449 p~riPeDa~l-eayfd~~G~iLEiiVpK~r 477 (508)
|. ++|+.- +|.|..+| ||+|.+||..
T Consensus 63 P~--~vd~~~i~A~~s~nG-vL~I~lPK~~ 89 (101)
T 2wj5_A 63 PP--GVDPAAVTSALSPEG-VLSIQATPAS 89 (101)
T ss_dssp CT--TBCTTCCEEEECTTS-EEEEEECBCC
T ss_pred CC--CcChhHCEEEECCCC-EEEEEEECCC
Confidence 99 889876 99998899 9999999973
No 2
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.19 E-value=1.3e-10 Score=95.69 Aligned_cols=92 Identities=25% Similarity=0.370 Sum_probs=74.6
Q ss_pred CCeeeeEEEEecCceEEEEEecCccccCceeEEEEeccCCceEEEEEEecCCcceeeeecceeeecCCCCCCCCCCceeE
Q 037054 365 GPVTAAKTIYEDDEGFLIIISLPFADLQRVKVTWRNTPTHGIVKVSCVSTARMPLIKRQDRTFKLTDPTPEHCPPGEFIR 444 (508)
Q Consensus 365 GPvtgak~IyEde~gYLi~VSLPfVd~~~vkvSwrnt~t~GiVkIscvST~~~p~IkRhdRtFkl~dps~ehCPPGeF~r 444 (508)
|...-++||+|++++|.+.+.||||+++.++|+.. ++.+.|+|-......+ .+.. ..-|.|.|
T Consensus 3 g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~----~~~L~I~g~~~~~~~~-~~~e------------r~~g~f~R 65 (102)
T 4fei_A 3 GPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAED----GGQLTVSGERPGTEHL-LRSE------------RPSGRFVR 65 (102)
T ss_dssp EECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEE----TTEEEEEEEECCCSSC-SSCC------------SEEEEEEE
T ss_pred CcccCcEEEEEcCCEEEEEEECCCCchHhEEEEEE----CCEEEEEEEEecCCCE-EEEE------------EeccEEEE
Confidence 55566889999999999999999999999999976 6899999987532111 1111 23489999
Q ss_pred EeeCCCCCCCCccc-ccccCCCCceEEEEeecCC
Q 037054 445 EIPLPNRIPEDAKL-EAYRDETGAMLEIIVPKHR 477 (508)
Q Consensus 445 ei~Lp~riPeDa~l-eayfd~~G~iLEiiVpK~r 477 (508)
+|+||. ++|+.- +|.| .+| ||+|.+||..
T Consensus 66 ~~~LP~--~vd~~~i~A~~-~~G-vL~I~lpK~~ 95 (102)
T 4fei_A 66 ELAFPE--PVRPASGVASL-AGG-VLTVRFEKLR 95 (102)
T ss_dssp EEECSS--CBCTTCCEEEE-ETT-EEEEEEEBSS
T ss_pred EEECCC--CcchhHcEEEE-ECC-EEEEEEEccC
Confidence 999999 788866 9999 489 9999999974
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.14 E-value=3.7e-10 Score=91.60 Aligned_cols=92 Identities=26% Similarity=0.395 Sum_probs=73.5
Q ss_pred eeEEEEecCceEEEEEecCccccCceeEEEEeccCCceEEEEEEecCCcceeeeecceeeecCCCCCCCCCCceeEEeeC
Q 037054 369 AAKTIYEDDEGFLIIISLPFADLQRVKVTWRNTPTHGIVKVSCVSTARMPLIKRQDRTFKLTDPTPEHCPPGEFIREIPL 448 (508)
Q Consensus 369 gak~IyEde~gYLi~VSLPfVd~~~vkvSwrnt~t~GiVkIscvST~~~p~IkRhdRtFkl~dps~ehCPPGeF~rei~L 448 (508)
=++||+|++++|.+.+.|||++++.++|+.. +|.+.|+|-...... ..+..|... -..-|.|.|+|.|
T Consensus 5 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~----~~~L~I~g~~~~~~~---~~~~~~~~~-----er~~g~f~r~~~L 72 (100)
T 3gla_A 5 PRVDIKEEVNHFVLYADLPGIDPSQIEVQMD----KGILSIRGERKSESS---TETERFSRI-----ERRYGSFHRRFAL 72 (100)
T ss_dssp CCEEEEECSSEEEEEEECTTSCGGGCEEEEE----TTEEEEEEEECCGGG---SSGGGEEEE-----CCCCEEEEEEEEC
T ss_pred CcEEEEECCCEEEEEEECCCCCHHHEEEEEE----CCEEEEEEEEcCcCc---cCCccEEEE-----eecceEEEEEEEC
Confidence 3679999999999999999999999999987 689999998763221 122333333 2244999999999
Q ss_pred CCCCCCCccc-ccccCCCCceEEEEeecC
Q 037054 449 PNRIPEDAKL-EAYRDETGAMLEIIVPKH 476 (508)
Q Consensus 449 p~riPeDa~l-eayfd~~G~iLEiiVpK~ 476 (508)
|. ++|+.- +|.|. +| ||+|.+||.
T Consensus 73 P~--~vd~~~i~A~~~-~G-vL~I~~pK~ 97 (100)
T 3gla_A 73 PD--SADADGITAAGR-NG-VLEIRIPKR 97 (100)
T ss_dssp CT--TBCTTSCEEEEE-TT-EEEEEEEBC
T ss_pred CC--CcChHHeEEEEe-CC-EEEEEEecC
Confidence 99 788865 99995 79 999999997
No 4
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.09 E-value=5.3e-10 Score=98.54 Aligned_cols=90 Identities=22% Similarity=0.325 Sum_probs=71.6
Q ss_pred EEEEecCceEEEEEecCccccCceeEEEEeccCCceEEEEEEecCCcceeeeecceeeecCCCCCCC-CCCceeEEeeCC
Q 037054 371 KTIYEDDEGFLIIISLPFADLQRVKVTWRNTPTHGIVKVSCVSTARMPLIKRQDRTFKLTDPTPEHC-PPGEFIREIPLP 449 (508)
Q Consensus 371 k~IyEde~gYLi~VSLPfVd~~~vkvSwrnt~t~GiVkIscvST~~~p~IkRhdRtFkl~dps~ehC-PPGeF~rei~Lp 449 (508)
+||+|++++|.+.+.||||+++.++|+.. +|.+.|+|-..... .....+ |... -. .-|.|.|+|.||
T Consensus 59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~----~~~L~I~g~~~~~~--~~~~~~-~~~~-----Er~~~g~f~R~~~LP 126 (161)
T 4eld_A 59 ISIIEGDQHIKVIAWLPGVNKEDIILNAV----GDTLEIRAKRSPLM--ITESER-IIYS-----EIPEEEEIYRTIKLP 126 (161)
T ss_dssp EEEEECSSEEEEEEECTTCCGGGEEEEEE----TTEEEEEEECCCCC--CCSSCE-EEEE-----CSCCCCEEEEEEECS
T ss_pred eeEEEeCCEEEEEEECCCCChHhEEEEEE----CCEEEEEEEEcccc--cCCCce-EEEE-----EeeccccEEEEEECC
Confidence 89999999999999999999999999987 58999999765311 011111 2222 12 459999999999
Q ss_pred CCCCCCccc-ccccCCCCceEEEEeecC
Q 037054 450 NRIPEDAKL-EAYRDETGAMLEIIVPKH 476 (508)
Q Consensus 450 ~riPeDa~l-eayfd~~G~iLEiiVpK~ 476 (508)
. .+|+.- +|.|. +| ||+|.+||.
T Consensus 127 ~--~vd~~~i~A~~~-nG-vL~I~lpK~ 150 (161)
T 4eld_A 127 A--TVKEENASAKFE-NG-VLSVILPKA 150 (161)
T ss_dssp S--CBCGGGCEEEEE-TT-EEEEEEEBC
T ss_pred C--CcccccEEEEEE-CC-EEEEEEEcC
Confidence 9 888876 99994 99 999999996
No 5
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.09 E-value=7.9e-10 Score=92.24 Aligned_cols=90 Identities=21% Similarity=0.340 Sum_probs=73.0
Q ss_pred eeeEEEEecCceEEEEEecCccccCceeEEEEeccCCceEEEEEEecCCcceeeeecceeeecCCCCCCCCCCceeEEee
Q 037054 368 TAAKTIYEDDEGFLIIISLPFADLQRVKVTWRNTPTHGIVKVSCVSTARMPLIKRQDRTFKLTDPTPEHCPPGEFIREIP 447 (508)
Q Consensus 368 tgak~IyEde~gYLi~VSLPfVd~~~vkvSwrnt~t~GiVkIscvST~~~p~IkRhdRtFkl~dps~ehCPPGeF~rei~ 447 (508)
.|+.+|+|++++|.+.+.|||++++.++|+.. +|.+.|+|-.... ..+..|.. .+|.|+|+
T Consensus 2 sg~~~i~e~~~~~~v~~dlPG~~~edi~V~v~----~~~L~I~g~~~~~-----~~~~~~~~----------~eF~R~~~ 62 (106)
T 3l1e_A 2 SGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQ----EDFVEIHGKHNER-----QDDHGYIS----------REFHRRYR 62 (106)
T ss_dssp CCSEEEEECSSEEEEEEECTTSCGGGEEEEEE----TTEEEEEEEEEEE-----ETTTEEEE----------EEEEEEEE
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEE----CCEEEEEEEEccc-----cCCCCEEE----------EEEEEEEE
Confidence 47889999999999999999999999999987 5899999964311 11112221 24999999
Q ss_pred CCCCCCCCccc-ccccCCCCceEEEEeecCCCC
Q 037054 448 LPNRIPEDAKL-EAYRDETGAMLEIIVPKHRVG 479 (508)
Q Consensus 448 Lp~riPeDa~l-eayfd~~G~iLEiiVpK~r~g 479 (508)
||. .+|+.- +|.|..+| ||+|-+||.-..
T Consensus 63 LP~--~vd~~~i~A~~s~~G-vL~I~~PK~~~~ 92 (106)
T 3l1e_A 63 LPS--NVDQSALSCSLSADG-MLTFSGPKIPSG 92 (106)
T ss_dssp CCT--TBCTTSCEEEECTTS-EEEEEEEBCCCC
T ss_pred CCC--CcChhHcEEEECCCC-EEEEEEEccCcc
Confidence 999 889887 99999999 999999998543
No 6
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=98.97 E-value=2.3e-09 Score=94.34 Aligned_cols=99 Identities=23% Similarity=0.276 Sum_probs=76.2
Q ss_pred CCeeeeEEEEecCceEEEEEecCccccCceeEEEEeccCCceEEEEEEecCCcceeeeecceeeecCCCCCCCCCCceeE
Q 037054 365 GPVTAAKTIYEDDEGFLIIISLPFADLQRVKVTWRNTPTHGIVKVSCVSTARMPLIKRQDRTFKLTDPTPEHCPPGEFIR 444 (508)
Q Consensus 365 GPvtgak~IyEde~gYLi~VSLPfVd~~~vkvSwrnt~t~GiVkIscvST~~~p~IkRhdRtFkl~dps~ehCPPGeF~r 444 (508)
+...-++||+|++++|.+.+-|||++++.++|+-. .++.+.|+|-...... ..+..|... -..-|.|.|
T Consensus 40 ~~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~---~~~~L~I~g~~~~~~~---~~~~~~~~~-----Er~~g~F~R 108 (151)
T 1gme_A 40 AFANARMDWKETPEAHVFKADLPGVKKEEVKVEVE---DGNVLVVSGERTKEKE---DKNDKWHRV-----ERSSGKFVR 108 (151)
T ss_dssp HHGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEE---TTTEEEEEECCCCCCC---CTTCEEEEC-----CCCCCCEEE
T ss_pred cccCCceEEEEcCCEEEEEEECCCCChHHEEEEEe---cCCEEEEEEEEccccc---cCCceEEEE-----eEeccEEEE
Confidence 33455799999999999999999999999999875 3579999996553211 012223222 245699999
Q ss_pred EeeCCCCCCCCccc-ccccCCCCceEEEEeecCCC
Q 037054 445 EIPLPNRIPEDAKL-EAYRDETGAMLEIIVPKHRV 478 (508)
Q Consensus 445 ei~Lp~riPeDa~l-eayfd~~G~iLEiiVpK~r~ 478 (508)
+|+||. ++|+.- +|.| .+| ||+|.+||...
T Consensus 109 ~~~LP~--~vd~~~i~A~~-~nG-vL~I~lPK~~~ 139 (151)
T 1gme_A 109 RFRLLE--DAKVEEVKAGL-ENG-VLTVTVPKAEV 139 (151)
T ss_dssp EEECSS--CCCGGGCEEEE-ETT-EEEEEEECCCC
T ss_pred EEECCC--CccccceEEEE-ECC-EEEEEEEccCc
Confidence 999999 788876 9999 799 99999999853
No 7
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=98.94 E-value=2.6e-09 Score=97.09 Aligned_cols=98 Identities=17% Similarity=0.283 Sum_probs=66.8
Q ss_pred eeeEEEEecCceEEEEEecCccccCceeEEEEeccCCceEEEEEEecCCcceeeeecceeeecCCCCCCCCCCceeEEee
Q 037054 368 TAAKTIYEDDEGFLIIISLPFADLQRVKVTWRNTPTHGIVKVSCVSTARMPLIKRQDRTFKLTDPTPEHCPPGEFIREIP 447 (508)
Q Consensus 368 tgak~IyEde~gYLi~VSLPfVd~~~vkvSwrnt~t~GiVkIscvST~~~p~IkRhdRtFkl~dps~ehCPPGeF~rei~ 447 (508)
.|++||+|++++|.+.+.|||++++.++|+.. +|.+.|+|-..... .+..|... ||.|+|.
T Consensus 63 ~~~~dv~e~~d~~~v~~dlPG~~~edI~V~v~----~~~L~I~g~~~~~~-----~~~~~~~r----------eF~R~~~ 123 (175)
T 2klr_A 63 TGLSEMRLEKDRFSVNLDVKHFSPEELKVKVL----GDVIEVHGKHEERQ-----DEHGFISR----------EFHRKYR 123 (175)
T ss_dssp ------CCCCSEEEEEECCSSCCGGGEEEEEE----TTEEEEEEEEEEEE-----ETTEEEEE----------EEEEEEE
T ss_pred CCceEEEEcCCeEEEEEECCCCChHHEEEEEE----CCEEEEEEEEcccc-----cCCceEEE----------EEEEEEE
Confidence 45689999999999999999999999999887 68999999654211 11222211 4999999
Q ss_pred CCCCCCCCccc-ccccCCCCceEEEEeecCCCCCCceeEEE
Q 037054 448 LPNRIPEDAKL-EAYRDETGAMLEIIVPKHRVGPEEHEVRV 487 (508)
Q Consensus 448 Lp~riPeDa~l-eayfd~~G~iLEiiVpK~r~g~eehev~v 487 (508)
||. .+|+.- +|.|..+| ||+|.+||......++.|.|
T Consensus 124 LP~--~Vd~~~i~A~~s~dG-vL~I~lPK~~~~~~~r~I~I 161 (175)
T 2klr_A 124 IPA--DVDPLTITSSLSSDG-VLTVNGPRKQVSGPERTIPI 161 (175)
T ss_dssp CTT--TCCTTTCEEEECTTS-CEEEEEECC-----------
T ss_pred CCC--CcChhHeEEEEcCCC-EEEEEEECCCCCCCCeEEEE
Confidence 999 888865 99999999 99999999743322344444
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=98.87 E-value=9.4e-09 Score=82.62 Aligned_cols=82 Identities=16% Similarity=0.248 Sum_probs=65.8
Q ss_pred EEecCceEEEEEecCccccCceeEEEEeccCCceEEEEEEecCCcceeeeecceeeecCCCCCCCCCCceeEEeeCCCCC
Q 037054 373 IYEDDEGFLIIISLPFADLQRVKVTWRNTPTHGIVKVSCVSTARMPLIKRQDRTFKLTDPTPEHCPPGEFIREIPLPNRI 452 (508)
Q Consensus 373 IyEde~gYLi~VSLPfVd~~~vkvSwrnt~t~GiVkIscvST~~~p~IkRhdRtFkl~dps~ehCPPGeF~rei~Lp~ri 452 (508)
|.|++++|.+.+.|||++++.++|+-. +|.+.|+|-...... .+-| --|.|.|+|+||.
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~----~~~L~I~g~~~~~~~-----~~~~----------~~~~F~R~~~LP~-- 60 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTK----DGVVEITGKHAARQD-----EHGY----------ISRCFTRKYTLPP-- 60 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEE----TTEEEEEEEEC------------C----------CCEEEEEEEECCT--
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEE----CCEEEEEEEEccccC-----CCCE----------EEEEEEEEEECCC--
Confidence 579999999999999999999999976 689999997542210 0111 2379999999999
Q ss_pred CCCccc-ccccCCCCceEEEEeecC
Q 037054 453 PEDAKL-EAYRDETGAMLEIIVPKH 476 (508)
Q Consensus 453 PeDa~l-eayfd~~G~iLEiiVpK~ 476 (508)
.+|+.- +|.|.++| ||.|.+||-
T Consensus 61 ~vd~~~i~A~~~~~G-vL~I~lPK~ 84 (85)
T 3q9p_A 61 GVDPTQVSSSLSPEG-TLTVEAPMP 84 (85)
T ss_dssp TCCGGGCEEEECTTS-EEEEEEECC
T ss_pred CcChHHcEEEECCCC-EEEEEEEcC
Confidence 888865 99999999 999999994
No 9
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=98.85 E-value=1.5e-08 Score=81.91 Aligned_cols=81 Identities=17% Similarity=0.298 Sum_probs=62.5
Q ss_pred ecCceEEEEEecCccccCceeEEEEeccCCceEEEEEEecCCcceeeeecceeeecCCCCCCCCCCceeEEeeCCCCCCC
Q 037054 375 EDDEGFLIIISLPFADLQRVKVTWRNTPTHGIVKVSCVSTARMPLIKRQDRTFKLTDPTPEHCPPGEFIREIPLPNRIPE 454 (508)
Q Consensus 375 Ede~gYLi~VSLPfVd~~~vkvSwrnt~t~GiVkIscvST~~~p~IkRhdRtFkl~dps~ehCPPGeF~rei~Lp~riPe 454 (508)
+++++|.+.+.|||++.+.++|+-. +|.+.|+|-.... .-+..|.. .+|.|+|+||. ++
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~----~~~L~I~g~~~~~-----~~~~~~~~----------~ef~R~~~LP~--~v 61 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVL----GDVIEVHGKHEER-----QDEHGFIS----------REFHRKYRIPA--DV 61 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEE----TTEEEEEEEEEEE-----ECSSSEEE----------EEEEEEEECCT--TB
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEE----CCEEEEEEEEecc-----cCCCCEEE----------EEEEEEEECCC--Cc
Confidence 5789999999999999999999876 6899999975421 01112221 14999999999 88
Q ss_pred Cccc-ccccCCCCceEEEEeecCC
Q 037054 455 DAKL-EAYRDETGAMLEIIVPKHR 477 (508)
Q Consensus 455 Da~l-eayfd~~G~iLEiiVpK~r 477 (508)
|+.- +|.|..+| ||+|.+||..
T Consensus 62 d~~~i~A~~~~~G-vL~I~~pK~~ 84 (90)
T 2y1y_A 62 DPLTITSSMSSDG-VLTVNGPRKQ 84 (90)
T ss_dssp CGGGCEEEECTTS-EEEEEECBC-
T ss_pred ChhHcEEEECCCC-EEEEEEEcCC
Confidence 9875 99999999 9999999974
No 10
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=98.83 E-value=2e-08 Score=84.80 Aligned_cols=90 Identities=17% Similarity=0.200 Sum_probs=71.1
Q ss_pred eeEEEEecCceEEEEEecCccccCceeEEEEeccCCceEEEEEEecCCcceeeeecceeeecCCCCCCCCCCceeEEeeC
Q 037054 369 AAKTIYEDDEGFLIIISLPFADLQRVKVTWRNTPTHGIVKVSCVSTARMPLIKRQDRTFKLTDPTPEHCPPGEFIREIPL 448 (508)
Q Consensus 369 gak~IyEde~gYLi~VSLPfVd~~~vkvSwrnt~t~GiVkIscvST~~~p~IkRhdRtFkl~dps~ehCPPGeF~rei~L 448 (508)
-++||+|++++|.+.+.|||++++.++|+..+ +|.+.|+|-..... +..|... | ..- .|.|+|+|
T Consensus 25 P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~---~~~L~I~g~~~~~~------~~~~~~~----E-r~~-~f~R~~~L 89 (123)
T 3aab_A 25 PPVDMYEEGGYLVVVADLAGFNKEKIKARVSG---QNELIIEAEREITE------PGVKYLT----Q-RPK-YVRKVIRL 89 (123)
T ss_dssp SCEEEEEETTEEEEEEECCSCCGGGCEEEEET---TTEEEEEEECCCCC------CSCEEEE----C-SCS-EEEEEEEC
T ss_pred CcEEEEEcCCEEEEEEECCCCCHHHEEEEEeC---CCEEEEEEEEeccC------CCeEEEE----E-EeE-EEEEEEEC
Confidence 46899999999999999999999999999872 28999999866422 2233322 2 222 79999999
Q ss_pred CCCCCCCcc-c-ccccCCCCceEEEEeecCC
Q 037054 449 PNRIPEDAK-L-EAYRDETGAMLEIIVPKHR 477 (508)
Q Consensus 449 p~riPeDa~-l-eayfd~~G~iLEiiVpK~r 477 (508)
|. ++|+. + +|.| .+| ||+|.+||..
T Consensus 90 P~--~vd~~~i~~A~~-~~G-vL~I~lPK~~ 116 (123)
T 3aab_A 90 PY--NVAKDAEISGKY-ENG-VLTIRIPIAG 116 (123)
T ss_dssp SS--EECTTCCCEEEE-ETT-EEEEEEEGGG
T ss_pred CC--CcCcchhCeeEE-cCC-EEEEEEEcCC
Confidence 99 77774 5 8999 589 9999999973
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=98.55 E-value=3.2e-07 Score=90.35 Aligned_cols=107 Identities=18% Similarity=0.213 Sum_probs=81.5
Q ss_pred eeeeEEEEecCc----eEEEEEecCccccCceeEEEEeccCCceEEEEEEecCCcceeeeecceeeecCCCCCCCCCCce
Q 037054 367 VTAAKTIYEDDE----GFLIIISLPFADLQRVKVTWRNTPTHGIVKVSCVSTARMPLIKRQDRTFKLTDPTPEHCPPGEF 442 (508)
Q Consensus 367 vtgak~IyEde~----gYLi~VSLPfVd~~~vkvSwrnt~t~GiVkIscvST~~~p~IkRhdRtFkl~dps~ehCPPGeF 442 (508)
..-++||||.++ +|.+.+.|||++++.++|+-. +|.+.|+|-...... +-..-|.|
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~----~~~L~I~ge~~~~~e----------------~~r~~g~F 156 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKAD----KNKLVVRAQKSVACG----------------DAAMSESV 156 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEE----TTEEEEEECCBSSTT----------------CCCBCCCE
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEE----CCEEEEEEEEeccCC----------------CCEEEEEE
Confidence 345789999999 999999999999999999865 789999986542110 11456999
Q ss_pred eEEeeCCCCCCCCccc-ccccCCCCceEEEEeecCCCCCCc----eeEEEEecCCCCCC
Q 037054 443 IREIPLPNRIPEDAKL-EAYRDETGAMLEIIVPKHRVGPEE----HEVRVCLRPSPWSE 496 (508)
Q Consensus 443 ~rei~Lp~riPeDa~l-eayfd~~G~iLEiiVpK~r~g~ee----hev~v~lrp~~~~~ 496 (508)
.|+|.||. .+|+.- +|.|..+| ||+|-+||.-...+. ++-.+..+|.+..+
T Consensus 157 ~R~~~LP~--~Vd~e~i~A~~~~nG-VL~I~lPK~~~~~~~I~it~~~ql~Iqp~s~~q 212 (314)
T 2bol_A 157 GRSIPLPP--SVDRNHIQATITTDD-VLVIEAPVNEPNYKAIKLSPEKGLAIQPSEVQE 212 (314)
T ss_dssp EEEEECCT--TBCGGGCEEEECSSS-EEEEEEEBSSCCTTTEEEETTTEEEECCBCCSS
T ss_pred EEEEECCC--CccccccEEEEeCCC-EEEEEEeccCcccceeecccCCccCcCCCcccc
Confidence 99999999 888875 99999999 999999997422211 12255667755544
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=98.00 E-value=1.1e-05 Score=79.62 Aligned_cols=86 Identities=20% Similarity=0.196 Sum_probs=62.9
Q ss_pred EEEEecC---ceEEEEEec-CccccCceeEEEEeccCCceEEEEEEecCCcceeeeecceeeecCCCCCCCCCCceeEEe
Q 037054 371 KTIYEDD---EGFLIIISL-PFADLQRVKVTWRNTPTHGIVKVSCVSTARMPLIKRQDRTFKLTDPTPEHCPPGEFIREI 446 (508)
Q Consensus 371 k~IyEde---~gYLi~VSL-PfVd~~~vkvSwrnt~t~GiVkIscvST~~~p~IkRhdRtFkl~dps~ehCPPGeF~rei 446 (508)
.+|.|++ ++|.+.+.| ||++++.++|+-. +|.+.|+|-...-.... .+.--.=|+|.|+|
T Consensus 223 ~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~----~~~LtI~ge~~~~~~~~------------~~~Er~~g~F~R~~ 286 (314)
T 2bol_A 223 LEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAK----GNKVYVHGVTGKEEKTE------------NASHSEHREFYKAF 286 (314)
T ss_dssp EEEEECTTSCEEEEEEEECCTTCCGGGEEEEES----SSEEEEEEEEC------------------------CEEEEEEE
T ss_pred CcEEEecCCCcEEEEEEEcCCCCChHHeEEEEE----CCEEEEEEEEeccCCce------------EEEEEeeeEEEEEE
Confidence 3455544 678888888 9999999999864 78999999765322211 11234468999999
Q ss_pred eCCCCCCCCccc-ccccCCCCceEEEEeecC
Q 037054 447 PLPNRIPEDAKL-EAYRDETGAMLEIIVPKH 476 (508)
Q Consensus 447 ~Lp~riPeDa~l-eayfd~~G~iLEiiVpK~ 476 (508)
.||. .+|+.- +|.|. +| ||.|-+||.
T Consensus 287 ~LP~--~vd~~~i~A~~~-dG-vL~i~~Pk~ 313 (314)
T 2bol_A 287 VTPE--VVDASKTQAEIV-DG-LMVVEAPLF 313 (314)
T ss_dssp ECSS--EECGGGCEEEEE-TT-EEEEEEEEE
T ss_pred ECCC--CcChHHeEEEEe-CC-EEEEEEecC
Confidence 9999 889877 99995 89 999999995
No 13
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=94.29 E-value=0.28 Score=38.39 Aligned_cols=77 Identities=13% Similarity=0.084 Sum_probs=57.1
Q ss_pred eEEEEecCceEEEEEecCccccCceeEEEEeccCCceEEEEEEecCCcceeeeecceeeecCCCCCCCCCCceeEEeeCC
Q 037054 370 AKTIYEDDEGFLIIISLPFADLQRVKVTWRNTPTHGIVKVSCVSTARMPLIKRQDRTFKLTDPTPEHCPPGEFIREIPLP 449 (508)
Q Consensus 370 ak~IyEde~gYLi~VSLPfVd~~~vkvSwrnt~t~GiVkIscvST~~~p~IkRhdRtFkl~dps~ehCPPGeF~rei~Lp 449 (508)
..+.|+.++-..+.|-+|+++.+.++|... ...++|++.... ..+|.+++.|+
T Consensus 4 ~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~----~~~l~v~~~~~~-----------------------~~~y~~~~~L~ 56 (92)
T 2xcm_C 4 RHEYYQKPEEVVVTVFAKGIPKQNVNIDFG----EQILSVVIEVPG-----------------------EDAYYLQPRLF 56 (92)
T ss_dssp EEEEEEETTEEEEEEECCSCCGGGEEEEEC----SSBEEEEECCTT-----------------------SCCEEECCBBS
T ss_pred cccEEeCCCEEEEEEEECCCChHHeEEEEE----CCEEEEEEEcCC-----------------------CcEEEEeeEcC
Confidence 357788888888999999998888877764 445777654321 14788999999
Q ss_pred CCCCCCccc-ccccCCCCceEEEEeecCC
Q 037054 450 NRIPEDAKL-EAYRDETGAMLEIIVPKHR 477 (508)
Q Consensus 450 ~riPeDa~l-eayfd~~G~iLEiiVpK~r 477 (508)
+ ++||.- ...+ .+| .+||.+.|.-
T Consensus 57 ~--~I~~~~s~~~~-~~~-~l~i~L~K~~ 81 (92)
T 2xcm_C 57 G--KIIPDKCKYEV-LST-KIEICLAKAD 81 (92)
T ss_dssp S--CBCGGGCEEEE-CSS-CEEEEEEBSS
T ss_pred C--ccCchhEEEEE-ECC-EEEEEEEcCC
Confidence 9 888886 4444 356 6999999973
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=93.60 E-value=0.35 Score=39.67 Aligned_cols=77 Identities=12% Similarity=0.117 Sum_probs=58.2
Q ss_pred eEEEEecCceEEEEEecCccccCceeEEEEeccCCceEEEEEEecCCcceeeeecceeeecCCCCCCCCCCceeEEeeCC
Q 037054 370 AKTIYEDDEGFLIIISLPFADLQRVKVTWRNTPTHGIVKVSCVSTARMPLIKRQDRTFKLTDPTPEHCPPGEFIREIPLP 449 (508)
Q Consensus 370 ak~IyEde~gYLi~VSLPfVd~~~vkvSwrnt~t~GiVkIscvST~~~p~IkRhdRtFkl~dps~ehCPPGeF~rei~Lp 449 (508)
..+.|+.++...+.|-||+++...++|... ...++|++.... ..+|.+++.|+
T Consensus 11 ~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~----~~~l~v~~~~~~-----------------------~~~y~~~~~L~ 63 (114)
T 1rl1_A 11 KYDWYQTESQVVITLMIKNVQKNDVNVEFS----EKELSALVKLPS-----------------------GEDYNLKLELL 63 (114)
T ss_dssp CEEEEECSSEEEEEECCCSCCGGGEEEECS----SSCEEEEEECTT-----------------------SSEEEEEECBS
T ss_pred CccEEeCCCEEEEEEEeCCCCHHHCEEEEE----cCEEEEEEEeCC-----------------------CcEEEEEeeCC
Confidence 468899999999999999998888877654 445777765321 13788999999
Q ss_pred CCCCCCccc-ccccCCCCceEEEEeecCC
Q 037054 450 NRIPEDAKL-EAYRDETGAMLEIIVPKHR 477 (508)
Q Consensus 450 ~riPeDa~l-eayfd~~G~iLEiiVpK~r 477 (508)
+ ++||.- .+.+ .+| .|||.+.|..
T Consensus 64 ~--~I~~e~s~~~~-~~~-~l~i~L~K~~ 88 (114)
T 1rl1_A 64 H--PIIPEQSTFKV-LST-KIEIKLKKPE 88 (114)
T ss_dssp S--CCCGGGEEEEE-CSS-SEEEEEECSS
T ss_pred C--cCCccccEEEE-ECC-EEEEEEEcCC
Confidence 9 888876 4444 346 6999999973
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=74.98 E-value=7.1 Score=34.94 Aligned_cols=49 Identities=16% Similarity=0.303 Sum_probs=38.6
Q ss_pred eecceeeecCCCCCCCCCCceeEEeeCCCCCCCCcccccccCC-CCceEEEEeecCCCC
Q 037054 422 RQDRTFKLTDPTPEHCPPGEFIREIPLPNRIPEDAKLEAYRDE-TGAMLEIIVPKHRVG 479 (508)
Q Consensus 422 RhdRtFkl~dps~ehCPPGeF~rei~Lp~riPeDa~leayfd~-~G~iLEiiVpK~r~g 479 (508)
=.+..|.+- ||| |-.-..||++|=+|-+-+|.||. +| .|+|-+||.-.|
T Consensus 35 v~~~~F~F~------~~P--YyLRL~LP~~V~e~~~~kA~YD~d~~-~~~VtLpK~~~G 84 (134)
T 2k8q_A 35 IQENMIIFH------LSP--YYLRLRFPHELIDDERSTAQYDSKDE-CINVKVAKLNKN 84 (134)
T ss_dssp ECSSSEEEC------SSS--SCEEECCSSCEECCSSCEEEEETTTT-EEEEEEEESSTT
T ss_pred EeCCEEEEe------cCC--eEEEecCCCeeecCCCcceeEeccCC-EEEEEEeCCCCC
Confidence 356777775 888 77779999966666666999996 67 899999997555
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=65.88 E-value=19 Score=31.77 Aligned_cols=76 Identities=14% Similarity=0.179 Sum_probs=51.8
Q ss_pred eEEEEeccCCceEEEEEEec---CCcceeeeecceeeecCCCCCCCCCCceeEEeeCCCCCCCCcccccccCC-CCceEE
Q 037054 395 KVTWRNTPTHGIVKVSCVST---ARMPLIKRQDRTFKLTDPTPEHCPPGEFIREIPLPNRIPEDAKLEAYRDE-TGAMLE 470 (508)
Q Consensus 395 kvSwrnt~t~GiVkIscvST---~~~p~IkRhdRtFkl~dps~ehCPPGeF~rei~Lp~riPeDa~leayfd~-~G~iLE 470 (508)
+|++...+..=+|+|.|-.+ +.+--|.=.++.|... |+| |-....||++|=+|-+-.|.||. +| .+-
T Consensus 19 ~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~------~~P--YyLRL~lP~~vved~~~~A~YD~d~g-~~~ 89 (115)
T 3eud_A 19 RFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFH------LSP--YYLRLRFPHELIDDERSTAQYDSKDE-CIN 89 (115)
T ss_dssp CEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEE------ETT--EEEEEECSSCEECSTTCEEEEETTTT-EEE
T ss_pred cEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEe------cCC--eEEEEecCcceecCCCcceEEeCCCc-EEE
Confidence 45555444555555554432 1122244456677776 777 77889999999898888899995 56 899
Q ss_pred EEeecCCCC
Q 037054 471 IIVPKHRVG 479 (508)
Q Consensus 471 iiVpK~r~g 479 (508)
|-+||.-.|
T Consensus 90 v~lpK~~~G 98 (115)
T 3eud_A 90 VKVAKLNKN 98 (115)
T ss_dssp EEEEESSTT
T ss_pred EEEcCCcCC
Confidence 999998655
No 17
>1f35_A Olfactory marker protein; beta, structural genomics, PSI, protein structure initiative northeast structural genomics consortium, NESG, signaling P; 2.30A {Mus musculus} SCOP: b.94.1.1 PDB: 1job_A 1jod_A 1jyt_A 1zri_A
Probab=47.45 E-value=19 Score=33.18 Aligned_cols=57 Identities=25% Similarity=0.284 Sum_probs=42.9
Q ss_pred EEecCccccCceeEEEEec--cCCceEEEEEEecCCcceeeeecceeeecCCCCCCCCCCceeEEe
Q 037054 383 IISLPFADLQRVKVTWRNT--PTHGIVKVSCVSTARMPLIKRQDRTFKLTDPTPEHCPPGEFIREI 446 (508)
Q Consensus 383 ~VSLPfVd~~~vkvSwrnt--~t~GiVkIscvST~~~p~IkRhdRtFkl~dps~ehCPPGeF~rei 446 (508)
+..|-|+-.|..+|.|.|+ .+.|+|.|.|+|--=.| |=|--|| -+-+=|-|-|-|.-
T Consensus 51 VYrlDF~~~q~L~F~~W~v~l~~pGkvtitgtsQ~WTP-----DLT~LMT--RQlLeP~~~Fwr~~ 109 (162)
T 1f35_A 51 VYRLDFIQQQKLQFDHWNVVLDKPGKVTITGTSQNWTP-----DLTNLMT--RQLLDPAAIFWRKE 109 (162)
T ss_dssp EEEEECSCCSSEEEEEEEEEESSSEEEEEEEBCTTCCT-----TTCCCBG--GGBCSSCEEEEECT
T ss_pred eEEecccccceeeEEEEEEEEcCCCeEEEEeeccccCc-----chHHHHH--hcccchhhhhhhcc
Confidence 3467899999999999997 57899999999875555 3344555 45566888888853
No 18
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=45.55 E-value=28 Score=34.69 Aligned_cols=70 Identities=27% Similarity=0.196 Sum_probs=45.0
Q ss_pred EEEEecCceEEEEEecCccccCceeEEEEeccCCceEEEEEEecCCcceeeeecceeeecCCCCCCCCCCceeEEeeCCC
Q 037054 371 KTIYEDDEGFLIIISLPFADLQRVKVTWRNTPTHGIVKVSCVSTARMPLIKRQDRTFKLTDPTPEHCPPGEFIREIPLPN 450 (508)
Q Consensus 371 k~IyEde~gYLi~VSLPfVd~~~vkvSwrnt~t~GiVkIscvST~~~p~IkRhdRtFkl~dps~ehCPPGeF~rei~Lp~ 450 (508)
+.+..+..+|.+++-|||++++.++++=. ..-+.|+ -|.|-|-|.||.
T Consensus 298 ~~~~i~~~~~~~~l~lP~~~~~~~~l~~~----gdeL~v~----------------------------~g~~rR~i~LP~ 345 (374)
T 3igf_A 298 KPITIDTHNRQVRLFLPGFDKKQVKLTQY----GPEVTVE----------------------------AGDQRRNIFLPP 345 (374)
T ss_dssp CSEEEETTTTEEEEECTTCCGGGCEEEEE----TTEEEEE----------------------------ETTEEEEEECCT
T ss_pred CCEEEEeccEEEEEECCCCCHHHeEEEEE----CCeEEEE----------------------------ECCEeecccCCH
Confidence 44555666999999999999999998754 2223322 189999999998
Q ss_pred CCCCCcccccccCCCCceEEEEee
Q 037054 451 RIPEDAKLEAYRDETGAMLEIIVP 474 (508)
Q Consensus 451 riPeDa~leayfd~~G~iLEiiVp 474 (508)
-+=-=.--.|.|+. | -|.|-.-
T Consensus 346 ~L~~~~v~~A~~~~-~-~L~i~~~ 367 (374)
T 3igf_A 346 ALSGRPITGAKFQN-N-YLIISFL 367 (374)
T ss_dssp TTTTCCEEEEEEET-T-EEEEEEC
T ss_pred HHcCCCccccEEEC-C-EEEEEEe
Confidence 33211111445544 4 4665553
No 19
>1zo2_A NTF2, nuclear transport factor 2; structural genomics, structural genomics consortium, SGC, transport protein; 1.60A {Cryptosporidium parvum} SCOP: d.17.4.2
Probab=31.09 E-value=49 Score=28.09 Aligned_cols=59 Identities=19% Similarity=0.213 Sum_probs=34.8
Q ss_pred CeeeeEEEEecCceEEEEEecCccc--cCceeEEEEeccCCce-EEEEEEecCCcceeeeecceeeec
Q 037054 366 PVTAAKTIYEDDEGFLIIISLPFAD--LQRVKVTWRNTPTHGI-VKVSCVSTARMPLIKRQDRTFKLT 430 (508)
Q Consensus 366 Pvtgak~IyEde~gYLi~VSLPfVd--~~~vkvSwrnt~t~Gi-VkIscvST~~~p~IkRhdRtFkl~ 430 (508)
++.|...|.+- ..+||+-+ -+--.+.|.-+..+|+ |.|+|.-+..+.-.++.+|||-|+
T Consensus 49 ~~~G~~~I~~~------l~~Lp~~~~~h~i~t~D~qp~~~~gilI~V~G~~~~~~~~~~~F~qtF~L~ 110 (129)
T 1zo2_A 49 QFQGQANIVNK------FNSLNFQRVQFEITRVDCQPSPNNGSIVFVTGDVRIDDGQPLKFSQVFNLM 110 (129)
T ss_dssp EEESHHHHHHH------HHHHCCSCEEEEEEEEEEEECTBSSEEEEEEEEEEETTCCCEEEEEEEEEE
T ss_pred eeccHHHHHHH------HHhCCCcceEEEEEEEEEEEeCCCcEEEEEEEEEEECCCCcceEEEEEEEE
Confidence 44555555442 34678732 3223566665544454 456666665666788888888887
No 20
>1gy6_A Nuclear transport factor 2; 1.6A {Rattus norvegicus} SCOP: d.17.4.2 PDB: 1a2k_A 1oun_A 1ar0_A 1u5o_A 1ask_A 1gy5_A 1jb5_A 1jb4_A 1jb2_A 1qma_A
Probab=30.37 E-value=58 Score=27.50 Aligned_cols=47 Identities=26% Similarity=0.188 Sum_probs=29.0
Q ss_pred EecCcc--ccCceeEEEEeccCCce-EEEEEEecCCcceeeeecceeeec
Q 037054 384 ISLPFA--DLQRVKVTWRNTPTHGI-VKVSCVSTARMPLIKRQDRTFKLT 430 (508)
Q Consensus 384 VSLPfV--d~~~vkvSwrnt~t~Gi-VkIscvST~~~p~IkRhdRtFkl~ 430 (508)
.+||+- +-+--.+.|.-+...|+ |.|+|.-+..+.-.++.+|||-|+
T Consensus 57 ~~Lp~~~~~h~i~t~d~qp~~~~~ili~V~G~~~~~~~~~~~F~qtF~L~ 106 (127)
T 1gy6_A 57 SSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLK 106 (127)
T ss_dssp HHCSCSCEEEEEEEEEEEECTTSCEEEEEEEEEEETTSCCEEEEEEEEEE
T ss_pred HhCCCcceEEEEEEEEEEEeCCCcEEEEEEEEEEECCCCcceEeEEEEEE
Confidence 378873 22222566765644443 456666665566678888888887
No 21
>3q90_A RAS GTPase-activating protein-binding protein 1; structural genomics, structural genomics consortium, SGC, NT (A+B proteins); 1.70A {Homo sapiens} SCOP: d.17.4.0
Probab=21.70 E-value=97 Score=26.61 Aligned_cols=59 Identities=24% Similarity=0.277 Sum_probs=39.0
Q ss_pred CeeeeEEEEecCceEEEEEecCccc--cCceeEEEEeccCCce-EEEEEEecCCcceeeeecceeeec
Q 037054 366 PVTAAKTIYEDDEGFLIIISLPFAD--LQRVKVTWRNTPTHGI-VKVSCVSTARMPLIKRQDRTFKLT 430 (508)
Q Consensus 366 Pvtgak~IyEde~gYLi~VSLPfVd--~~~vkvSwrnt~t~Gi-VkIscvST~~~p~IkRhdRtFkl~ 430 (508)
.++|...|-| ...||||-+ -.-..+.|--+..+|+ |.|+|.-+..+.-.++..|||-|+
T Consensus 55 ~~~G~~~I~~------~l~~Lp~~~~~~~I~tvD~Qps~~~gilI~V~G~l~~~~~~~~~F~QtF~L~ 116 (140)
T 3q90_A 55 AVYGQKEIHR------KVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLA 116 (140)
T ss_dssp CEEHHHHHHH------HHHHTCCCSCEEEEEEEEEEECGGGCEEEEEEEEEECTTCCCEEEEEEEEEE
T ss_pred cccCHHHHHH------HHHhCCCccceEEEEeEEEEEeCCCCEEEEEEEEEecCCCCccEEEEEEEEe
Confidence 5566667765 234899833 2222566765555554 567777776666678999999998
No 22
>3nv0_B NTF2-related export protein; NTF2-like domain, beta sheet heterodimer interface, nucleopo binding pocket, water mediated interface; 1.84A {Caenorhabditis elegans}
Probab=20.91 E-value=1e+02 Score=27.34 Aligned_cols=59 Identities=19% Similarity=0.235 Sum_probs=36.7
Q ss_pred CeeeeEEEEecCceEEEEEecCccccCceeEEEEecc-------CCc-eEEEEEEecCCcceeeeecceeeec
Q 037054 366 PVTAAKTIYEDDEGFLIIISLPFADLQRVKVTWRNTP-------THG-IVKVSCVSTARMPLIKRQDRTFKLT 430 (508)
Q Consensus 366 Pvtgak~IyEde~gYLi~VSLPfVd~~~vkvSwrnt~-------t~G-iVkIscvST~~~p~IkRhdRtFkl~ 430 (508)
++.|...|-+- ..+||+++-+-..|.|--+. ..| .|.|+|.-+..+.-.++..|||-|+
T Consensus 71 ~~~G~~~I~~~------l~~Lp~~~h~I~s~D~qp~~~~~~~q~~~~ilI~V~G~l~~~~~~~r~F~QtFvL~ 137 (154)
T 3nv0_B 71 PINGYDSICEF------MKALPSTQHDIQSLDAQRLPEGVTGDMSGGMLLNVAGAVTVDGDSKRAFTQTLLLG 137 (154)
T ss_dssp EEESHHHHHHH------HHHSCCEEEEEEEEEEEECCTTCCGGGTTCEEEEEEEEEEETTSCCEEEEEEEEEE
T ss_pred ecccHHHHHHH------HHhCCCeEEEEEEEEEEEcCccccCCCCCeEEEEEEEEEEECCCCceeEEEEEEEE
Confidence 34555555442 24788865554467777555 224 3567775544443489999999998
No 23
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=20.58 E-value=2.6e+02 Score=24.15 Aligned_cols=38 Identities=18% Similarity=0.311 Sum_probs=26.7
Q ss_pred CCCCC-ceeEEeeCCCCCCCCcccccccCCCCceEEEEeecC
Q 037054 436 HCPPG-EFIREIPLPNRIPEDAKLEAYRDETGAMLEIIVPKH 476 (508)
Q Consensus 436 hCPPG-eF~rei~Lp~riPeDa~leayfd~~G~iLEiiVpK~ 476 (508)
-|.|. .|..++.|-+ +.||.-.-|--.+ +-+||.+-|.
T Consensus 72 a~g~~~~y~~~~~L~~--~I~pe~S~~~v~~-~kIeI~L~K~ 110 (134)
T 1wh0_A 72 GCGPHTTFRWQVKLRN--LIEPEQCTFCFTA-SRIDICLRKR 110 (134)
T ss_dssp TCCTTSCEEEEEEBSS--CEEEEEEEEEECS-SEEEEEEEES
T ss_pred ccCcceeEEEeccccc--cCCchhCEEEEeC-CEEEEEEEEC
Confidence 45433 7999999999 7787764333333 4699999886
Done!