Query 037063
Match_columns 588
No_of_seqs 327 out of 2696
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 08:14:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037063.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037063hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0520 csdA Selenocysteine ly 100.0 1.8E-59 3.9E-64 496.6 39.1 392 95-567 4-404 (405)
2 PLN02724 Molybdenum cofactor s 100.0 2.6E-59 5.7E-64 537.8 41.1 446 81-565 2-485 (805)
3 COG1104 NifS Cysteine sulfinat 100.0 3.5E-50 7.6E-55 410.8 34.5 370 112-569 2-378 (386)
4 PRK09295 bifunctional cysteine 100.0 5.9E-49 1.3E-53 422.2 40.3 388 95-566 4-402 (406)
5 PLN02855 Bifunctional selenocy 100.0 7.4E-47 1.6E-51 408.2 40.6 390 98-568 16-418 (424)
6 TIGR03392 FeS_syn_CsdA cystein 100.0 9.4E-47 2E-51 404.1 40.6 386 95-568 2-395 (398)
7 PRK10874 cysteine sulfinate de 100.0 2E-46 4.4E-51 401.9 41.5 386 95-568 5-398 (401)
8 PF00266 Aminotran_5: Aminotra 100.0 2.2E-47 4.8E-52 405.2 31.8 367 113-558 1-371 (371)
9 TIGR01979 sufS cysteine desulf 100.0 1.7E-44 3.6E-49 387.3 40.1 389 98-568 2-401 (403)
10 PLN02651 cysteine desulfurase 100.0 7.5E-44 1.6E-48 377.1 33.3 358 113-556 1-364 (364)
11 TIGR03402 FeS_nifS cysteine de 100.0 5.4E-43 1.2E-47 372.6 36.7 368 113-568 1-372 (379)
12 KOG1549 Cysteine desulfurase N 100.0 8.5E-44 1.9E-48 364.6 28.6 377 110-577 42-427 (428)
13 TIGR03403 nifS_epsilon cystein 100.0 5.9E-42 1.3E-46 365.1 37.0 367 113-568 1-375 (382)
14 KOG2142 Molybdenum cofactor su 100.0 6.5E-44 1.4E-48 373.5 16.7 533 9-579 31-719 (728)
15 TIGR02006 IscS cysteine desulf 100.0 4.3E-41 9.4E-46 360.7 37.0 371 110-569 2-378 (402)
16 TIGR01976 am_tr_V_VC1184 cyste 100.0 8.1E-41 1.7E-45 358.1 38.3 377 96-562 3-397 (397)
17 TIGR01814 kynureninase kynuren 100.0 5.2E-40 1.1E-44 352.7 37.7 385 94-567 8-406 (406)
18 PRK02948 cysteine desulfurase; 100.0 4.3E-39 9.4E-44 342.9 35.2 370 112-569 1-375 (381)
19 TIGR01977 am_tr_V_EF2568 cyste 100.0 9.2E-38 2E-42 331.9 38.7 371 113-564 1-375 (376)
20 cd06453 SufS_like Cysteine des 100.0 9.1E-38 2E-42 331.6 37.1 368 113-562 1-373 (373)
21 PRK14012 cysteine desulfurase; 100.0 9.9E-38 2.1E-42 334.9 36.0 371 111-569 3-380 (404)
22 TIGR03235 DNA_S_dndA cysteine 100.0 4.9E-36 1.1E-40 316.1 32.3 320 114-514 1-328 (353)
23 PRK03080 phosphoserine aminotr 100.0 1.6E-35 3.6E-40 314.5 31.5 360 105-568 7-373 (378)
24 PLN02409 serine--glyoxylate am 100.0 2.3E-33 4.9E-38 300.6 34.5 361 110-569 7-373 (401)
25 cd06451 AGAT_like Alanine-glyo 100.0 3E-32 6.5E-37 287.5 34.5 320 178-567 31-356 (356)
26 cd00611 PSAT_like Phosphoserin 100.0 6.8E-33 1.5E-37 292.1 27.9 341 117-565 4-353 (355)
27 TIGR01364 serC_1 phosphoserine 100.0 4.4E-31 9.6E-36 276.8 29.5 341 121-568 1-348 (349)
28 TIGR02326 transamin_PhnW 2-ami 100.0 2.9E-30 6.3E-35 273.2 34.9 323 178-567 34-361 (363)
29 PRK05355 3-phosphoserine/phosp 100.0 1.1E-30 2.4E-35 275.1 28.2 348 114-568 5-358 (360)
30 TIGR01366 serC_3 phosphoserine 100.0 6.2E-30 1.3E-34 269.8 26.9 314 178-568 40-360 (361)
31 TIGR01788 Glu-decarb-GAD gluta 100.0 8E-29 1.7E-33 265.2 34.7 355 111-568 33-429 (431)
32 PRK13479 2-aminoethylphosphona 100.0 1.2E-28 2.6E-33 261.3 34.8 323 178-568 36-363 (368)
33 PTZ00094 serine hydroxymethylt 100.0 1.1E-28 2.4E-33 268.0 30.6 347 118-568 41-408 (452)
34 PRK02769 histidine decarboxyla 100.0 4.2E-28 9.2E-33 256.2 32.3 343 107-567 18-371 (380)
35 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 1.9E-27 4.1E-32 250.3 34.2 322 178-566 30-355 (355)
36 PRK13520 L-tyrosine decarboxyl 100.0 4E-27 8.8E-32 249.7 34.2 299 178-567 58-370 (371)
37 COG0075 Serine-pyruvate aminot 100.0 6.2E-27 1.4E-31 241.9 33.3 327 178-572 37-367 (383)
38 TIGR03812 tyr_de_CO2_Arch tyro 100.0 1E-25 2.2E-30 239.3 36.0 297 178-564 58-372 (373)
39 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 4.8E-25 1E-29 235.3 37.0 351 113-568 21-381 (387)
40 COG3844 Kynureninase [Amino ac 99.9 2.2E-25 4.8E-30 218.2 30.3 376 95-569 18-403 (407)
41 PLN02414 glycine dehydrogenase 99.9 6.8E-25 1.5E-29 251.7 35.8 322 178-570 567-909 (993)
42 cd00613 GDC-P Glycine cleavage 99.9 6.1E-25 1.3E-29 235.3 31.8 366 110-562 20-398 (398)
43 PLN03032 serine decarboxylase; 99.9 1E-24 2.2E-29 229.0 30.9 335 111-564 23-372 (374)
44 PLN02414 glycine dehydrogenase 99.9 4.8E-25 1E-29 252.9 30.8 347 107-564 97-465 (993)
45 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 4E-24 8.7E-29 226.2 35.7 344 119-566 9-360 (361)
46 cd06450 DOPA_deC_like DOPA dec 99.9 3.5E-25 7.6E-30 232.5 25.1 288 178-564 37-344 (345)
47 PRK05937 8-amino-7-oxononanoat 99.9 1.9E-24 4.1E-29 229.4 30.8 332 110-568 10-350 (370)
48 TIGR01437 selA_rel uncharacter 99.9 4.4E-24 9.5E-29 225.6 30.6 296 178-566 44-363 (363)
49 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 3.7E-23 8E-28 219.5 36.4 311 178-568 50-368 (370)
50 PLN02452 phosphoserine transam 99.9 6.8E-24 1.5E-28 222.7 28.5 350 111-568 6-363 (365)
51 PRK00451 glycine dehydrogenase 99.9 9.8E-24 2.1E-28 229.6 30.3 320 178-566 111-446 (447)
52 KOG2862 Alanine-glyoxylate ami 99.9 6E-23 1.3E-27 199.9 30.8 327 178-568 49-382 (385)
53 TIGR01822 2am3keto_CoA 2-amino 99.9 1.1E-22 2.3E-27 217.6 32.8 299 178-568 82-389 (393)
54 PRK05367 glycine dehydrogenase 99.9 3.8E-23 8.1E-28 238.5 30.6 302 178-563 120-437 (954)
55 PRK07179 hypothetical protein; 99.9 9.6E-23 2.1E-27 219.1 31.9 292 179-569 99-399 (407)
56 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.5E-22 3.2E-27 213.0 30.3 318 179-563 18-352 (352)
57 PRK06225 aspartate aminotransf 99.9 4.9E-22 1.1E-26 211.7 31.4 298 181-568 68-376 (380)
58 cd06454 KBL_like KBL_like; thi 99.9 6.2E-22 1.4E-26 208.0 31.0 296 178-565 45-348 (349)
59 PRK04366 glycine dehydrogenase 99.9 5.2E-22 1.1E-26 217.0 29.7 321 178-571 112-451 (481)
60 TIGR01329 cysta_beta_ly_E cyst 99.9 9.9E-23 2.2E-27 216.2 23.2 315 178-568 46-375 (378)
61 PRK08064 cystathionine beta-ly 99.9 2.1E-22 4.6E-27 214.6 25.3 317 176-565 51-383 (390)
62 TIGR01141 hisC histidinol-phos 99.9 3.8E-22 8.2E-27 209.7 26.1 284 182-563 57-346 (346)
63 PRK08134 O-acetylhomoserine am 99.9 2.5E-21 5.5E-26 208.1 32.6 159 178-361 63-225 (433)
64 KOG2142 Molybdenum cofactor su 99.9 1E-24 2.2E-29 229.7 5.8 397 100-564 14-427 (728)
65 PRK05387 histidinol-phosphate 99.9 1.4E-21 3E-26 206.0 29.0 286 182-567 63-352 (353)
66 cd00378 SHMT Serine-glycine hy 99.9 2.1E-21 4.5E-26 208.4 30.0 349 117-570 25-387 (402)
67 PRK00011 glyA serine hydroxyme 99.9 1.8E-21 3.9E-26 209.8 29.5 352 111-568 26-389 (416)
68 PLN03026 histidinol-phosphate 99.9 8.2E-21 1.8E-25 202.2 33.6 287 182-565 89-379 (380)
69 PRK06108 aspartate aminotransf 99.9 6.4E-21 1.4E-25 203.1 32.4 300 179-567 65-381 (382)
70 TIGR00858 bioF 8-amino-7-oxono 99.9 8.2E-21 1.8E-25 200.2 32.0 293 178-563 60-360 (360)
71 PRK14807 histidinol-phosphate 99.9 1.6E-20 3.4E-25 198.0 33.0 287 181-566 61-350 (351)
72 PRK09105 putative aminotransfe 99.9 7.7E-21 1.7E-25 201.6 30.7 320 110-566 43-368 (370)
73 PRK00950 histidinol-phosphate 99.9 8.8E-21 1.9E-25 200.5 30.5 284 182-566 72-360 (361)
74 PRK12462 phosphoserine aminotr 99.9 1.2E-20 2.5E-25 196.3 30.3 345 117-568 9-362 (364)
75 PRK05958 8-amino-7-oxononanoat 99.9 2.5E-20 5.5E-25 198.4 33.1 295 178-566 83-385 (385)
76 PLN02483 serine palmitoyltrans 99.9 2.3E-20 5E-25 204.2 32.8 308 178-571 145-469 (489)
77 PRK05957 aspartate aminotransf 99.9 4E-20 8.7E-25 197.6 33.5 304 178-568 68-385 (389)
78 PRK04870 histidinol-phosphate 99.9 1.4E-20 3E-25 198.7 29.2 326 110-566 26-356 (356)
79 PRK02731 histidinol-phosphate 99.9 8.3E-21 1.8E-25 201.3 27.5 287 182-568 70-366 (367)
80 PRK07908 hypothetical protein; 99.9 2.2E-20 4.7E-25 196.8 30.2 282 181-568 60-347 (349)
81 PLN03226 serine hydroxymethylt 99.9 4.9E-20 1.1E-24 200.1 33.5 357 118-568 41-419 (475)
82 TIGR03588 PseC UDP-4-keto-6-de 99.9 5E-20 1.1E-24 196.3 32.8 334 179-566 29-380 (380)
83 PRK06939 2-amino-3-ketobutyrat 99.9 4.6E-20 1E-24 197.3 32.5 300 178-569 86-394 (397)
84 PRK04635 histidinol-phosphate 99.9 6.7E-21 1.4E-25 201.0 25.6 282 182-565 63-352 (354)
85 cd00609 AAT_like Aspartate ami 99.9 9E-21 1.9E-25 198.4 25.8 294 183-563 40-349 (350)
86 PLN02721 threonine aldolase 99.9 1.6E-20 3.4E-25 197.8 26.8 300 181-568 42-352 (353)
87 PRK01688 histidinol-phosphate 99.9 6.3E-21 1.4E-25 201.0 23.8 280 182-562 60-350 (351)
88 PRK08133 O-succinylhomoserine 99.9 2.5E-20 5.5E-25 198.7 28.6 166 178-368 60-230 (390)
89 PRK13580 serine hydroxymethylt 99.9 2.3E-20 5.1E-25 199.4 27.9 342 118-568 56-445 (493)
90 TIGR03799 NOD_PanD_pyr putativ 99.9 3.4E-20 7.4E-25 202.7 29.4 262 178-482 128-439 (522)
91 PRK03158 histidinol-phosphate 99.9 7.9E-20 1.7E-24 193.2 31.4 286 181-566 66-359 (359)
92 PRK08861 cystathionine gamma-s 99.9 4.7E-20 1E-24 195.6 29.6 162 178-362 52-216 (388)
93 PRK08960 hypothetical protein; 99.9 7.7E-20 1.7E-24 195.3 31.5 336 110-567 32-386 (387)
94 PLN02822 serine palmitoyltrans 99.9 1.3E-19 2.8E-24 197.9 33.7 353 110-569 107-478 (481)
95 PRK09064 5-aminolevulinate syn 99.9 6.5E-20 1.4E-24 197.2 30.3 298 178-568 90-397 (407)
96 TIGR01365 serC_2 phosphoserine 99.9 4.4E-20 9.5E-25 194.0 27.8 316 178-563 38-368 (374)
97 TIGR01821 5aminolev_synth 5-am 99.9 8.8E-20 1.9E-24 195.8 30.8 298 178-568 89-396 (402)
98 PRK07324 transaminase; Validat 99.9 6.5E-20 1.4E-24 194.8 29.4 296 182-568 65-370 (373)
99 TIGR01825 gly_Cac_T_rel pyrido 99.9 1.7E-19 3.8E-24 192.3 32.7 296 178-568 77-381 (385)
100 PRK07503 methionine gamma-lyas 99.9 7.1E-20 1.5E-24 196.0 29.3 169 178-369 64-235 (403)
101 PRK06207 aspartate aminotransf 99.9 3.8E-19 8.2E-24 191.0 35.0 305 178-568 81-402 (405)
102 PRK13392 5-aminolevulinate syn 99.9 1.4E-19 3E-24 194.8 31.2 304 179-578 91-405 (410)
103 PRK08361 aspartate aminotransf 99.9 5.3E-20 1.2E-24 196.8 27.8 298 183-568 74-390 (391)
104 PRK05764 aspartate aminotransf 99.9 6.5E-20 1.4E-24 196.2 28.3 300 182-568 71-391 (393)
105 PRK08114 cystathionine beta-ly 99.9 5.4E-20 1.2E-24 194.5 27.1 167 178-368 61-233 (395)
106 PRK08249 cystathionine gamma-s 99.9 1.3E-19 2.7E-24 193.5 29.9 307 175-568 60-393 (398)
107 PRK11658 UDP-4-amino-4-deoxy-L 99.9 2.7E-19 5.8E-24 190.4 32.3 331 179-566 33-377 (379)
108 PRK06767 methionine gamma-lyas 99.9 2.8E-20 6.1E-25 198.2 24.5 306 180-567 62-384 (386)
109 PRK09028 cystathionine beta-ly 99.9 4.5E-20 9.7E-25 195.6 25.8 164 181-368 63-230 (394)
110 TIGR01324 cysta_beta_ly_B cyst 99.9 6.2E-20 1.4E-24 194.4 26.6 168 178-369 49-220 (377)
111 PRK08056 threonine-phosphate d 99.9 1.7E-19 3.6E-24 190.6 29.8 288 181-567 57-354 (356)
112 PRK06460 hypothetical protein; 99.9 1.2E-19 2.6E-24 192.6 28.7 310 173-568 39-374 (376)
113 PRK13393 5-aminolevulinate syn 99.9 4.6E-19 9.9E-24 190.5 33.5 298 178-568 89-396 (406)
114 PRK07582 cystathionine gamma-l 99.9 1.3E-19 2.8E-24 191.7 28.4 298 179-564 51-365 (366)
115 PRK08363 alanine aminotransfer 99.9 1.1E-19 2.5E-24 194.7 28.3 304 182-568 73-394 (398)
116 PRK05613 O-acetylhomoserine am 99.9 9.9E-20 2.2E-24 195.7 27.8 162 178-361 68-231 (437)
117 TIGR01328 met_gam_lyase methio 99.9 1.8E-19 4E-24 192.1 29.4 307 179-568 59-390 (391)
118 cd06502 TA_like Low-specificit 99.9 2.5E-20 5.4E-25 195.1 22.4 291 179-564 32-337 (338)
119 PRK13034 serine hydroxymethylt 99.9 3E-19 6.6E-24 192.0 31.1 303 184-567 79-391 (416)
120 PRK08045 cystathionine gamma-s 99.9 2.3E-19 5E-24 190.8 29.6 167 178-368 51-222 (386)
121 PRK08912 hypothetical protein; 99.9 5.2E-19 1.1E-23 188.9 32.4 308 179-568 67-386 (387)
122 PRK07812 O-acetylhomoserine am 99.9 1.6E-19 3.4E-24 194.1 28.3 162 178-363 68-233 (436)
123 PLN02271 serine hydroxymethylt 99.9 3.2E-19 7E-24 191.2 30.3 366 118-567 155-539 (586)
124 cd00614 CGS_like CGS_like: Cys 99.9 1.5E-19 3.3E-24 191.6 27.7 304 178-567 39-369 (369)
125 PRK07504 O-succinylhomoserine 99.9 5.3E-19 1.2E-23 188.9 31.9 165 179-366 65-232 (398)
126 PLN02880 tyrosine decarboxylas 99.9 1.8E-19 4E-24 196.5 28.8 329 178-570 121-486 (490)
127 PRK01533 histidinol-phosphate 99.9 1.6E-19 3.5E-24 191.2 27.3 280 182-568 67-355 (366)
128 PRK08776 cystathionine gamma-s 99.9 4.2E-19 9E-24 189.8 30.7 305 178-568 59-390 (405)
129 PLN00175 aminotransferase fami 99.9 1.2E-18 2.5E-23 187.6 34.3 305 179-567 95-412 (413)
130 PRK05968 hypothetical protein; 99.9 1.2E-19 2.5E-24 193.5 26.1 304 178-567 62-385 (389)
131 PRK07681 aspartate aminotransf 99.9 2.3E-19 5E-24 192.4 28.3 294 183-564 73-384 (399)
132 PRK07568 aspartate aminotransf 99.9 7.8E-19 1.7E-23 188.1 32.0 299 182-568 69-392 (397)
133 PRK07683 aminotransferase A; V 99.9 7.7E-19 1.7E-23 187.6 31.6 300 182-568 68-383 (387)
134 TIGR03540 DapC_direct LL-diami 99.9 4E-19 8.6E-24 189.5 29.3 294 183-564 71-382 (383)
135 PRK03321 putative aminotransfe 99.9 1.7E-19 3.7E-24 190.2 26.0 284 181-567 59-350 (352)
136 PRK12566 glycine dehydrogenase 99.9 2.2E-19 4.7E-24 202.8 28.3 327 178-576 542-885 (954)
137 PTZ00377 alanine aminotransfer 99.9 7.2E-19 1.6E-23 192.9 31.9 349 113-572 79-478 (481)
138 PRK07810 O-succinylhomoserine 99.9 3.9E-19 8.5E-24 190.0 28.9 163 179-366 70-237 (403)
139 TIGR01325 O_suc_HS_sulf O-succ 99.9 3.2E-19 6.9E-24 189.8 28.1 169 178-369 53-224 (380)
140 PRK06234 methionine gamma-lyas 99.9 2.1E-19 4.5E-24 192.3 26.7 166 179-369 64-236 (400)
141 TIGR02080 O_succ_thio_ly O-suc 99.9 2E-19 4.4E-24 191.0 26.4 168 178-368 50-221 (382)
142 PRK08248 O-acetylhomoserine am 99.8 3.9E-19 8.5E-24 191.3 28.8 161 178-363 63-227 (431)
143 COG0436 Aspartate/tyrosine/aro 99.8 3E-19 6.5E-24 189.9 27.0 309 178-568 68-391 (393)
144 KOG3846 L-kynurenine hydrolase 99.8 3.4E-19 7.5E-24 173.2 24.5 384 110-569 66-462 (465)
145 PRK05367 glycine dehydrogenase 99.8 1.1E-18 2.4E-23 201.7 33.3 322 178-576 541-884 (954)
146 PRK07682 hypothetical protein; 99.8 2.7E-19 5.9E-24 190.5 26.0 298 183-568 61-376 (378)
147 PRK08574 cystathionine gamma-s 99.8 4.4E-19 9.4E-24 188.7 27.2 165 178-368 52-222 (385)
148 PLN02590 probable tyrosine dec 99.8 7E-18 1.5E-22 184.4 37.1 397 83-567 99-531 (539)
149 PRK05942 aspartate aminotransf 99.8 5.9E-19 1.3E-23 188.9 28.3 294 183-567 77-388 (394)
150 COG0079 HisC Histidinol-phosph 99.8 6.8E-19 1.5E-23 184.2 27.8 289 181-568 59-354 (356)
151 PRK05166 histidinol-phosphate 99.8 1.7E-18 3.6E-23 184.0 31.3 286 183-567 75-370 (371)
152 PRK04781 histidinol-phosphate 99.8 8.6E-19 1.9E-23 185.6 29.0 290 181-567 61-362 (364)
153 PRK09276 LL-diaminopimelate am 99.8 6.4E-19 1.4E-23 188.1 28.0 294 183-564 73-384 (385)
154 PRK12414 putative aminotransfe 99.8 3.8E-18 8.2E-23 182.1 33.2 303 178-564 69-383 (384)
155 PRK05939 hypothetical protein; 99.8 8.2E-19 1.8E-23 187.1 27.9 161 178-362 46-208 (397)
156 PRK05994 O-acetylhomoserine am 99.8 2.4E-18 5.3E-23 185.3 31.8 160 179-362 63-225 (427)
157 COG0399 WecE Predicted pyridox 99.8 2.5E-18 5.3E-23 178.5 30.5 319 178-568 33-373 (374)
158 TIGR03537 DapC succinyldiamino 99.8 6.9E-19 1.5E-23 185.4 27.0 292 183-564 40-349 (350)
159 PLN02263 serine decarboxylase 99.8 1.4E-17 3.1E-22 177.6 37.0 301 177-570 131-445 (470)
160 PRK07337 aminotransferase; Val 99.8 2.6E-18 5.7E-23 183.5 31.5 301 182-566 70-387 (388)
161 PLN02509 cystathionine beta-ly 99.8 2.1E-18 4.5E-23 186.2 30.3 303 178-568 132-461 (464)
162 PRK07811 cystathionine gamma-s 99.8 6.6E-19 1.4E-23 187.7 26.1 300 179-567 61-387 (388)
163 PLN02242 methionine gamma-lyas 99.8 1.3E-18 2.9E-23 186.5 28.3 169 177-370 74-248 (418)
164 PRK07550 hypothetical protein; 99.8 2.5E-18 5.4E-23 183.6 30.3 301 179-565 71-384 (386)
165 PRK13355 bifunctional HTH-doma 99.8 2.1E-18 4.5E-23 190.9 30.6 298 182-568 188-514 (517)
166 PTZ00433 tyrosine aminotransfe 99.8 1.8E-18 3.8E-23 186.3 29.2 299 182-568 78-408 (412)
167 TIGR01264 tyr_amTase_E tyrosin 99.8 2E-18 4.3E-23 185.3 29.1 300 182-568 76-399 (401)
168 PRK05967 cystathionine beta-ly 99.8 1.2E-18 2.7E-23 184.4 26.3 166 178-368 63-233 (395)
169 PRK06176 cystathionine gamma-s 99.8 2.1E-18 4.5E-23 183.2 27.8 160 178-362 49-212 (380)
170 PRK09265 aminotransferase AlaT 99.8 5.7E-18 1.2E-22 182.0 31.5 301 182-568 75-401 (404)
171 PRK06348 aspartate aminotransf 99.8 2.8E-18 6.1E-23 183.1 28.8 295 183-565 70-382 (384)
172 PRK07671 cystathionine beta-ly 99.8 3.1E-18 6.7E-23 181.8 28.7 167 178-369 49-220 (377)
173 PLN00145 tyrosine/nicotianamin 99.8 5.6E-18 1.2E-22 183.1 31.0 301 182-569 97-425 (430)
174 PLN02187 rooty/superroot1 99.8 5.2E-18 1.1E-22 184.8 30.3 307 182-572 111-442 (462)
175 TIGR01265 tyr_nico_aTase tyros 99.8 5.3E-18 1.1E-22 182.1 29.8 302 182-568 76-401 (403)
176 PRK07309 aromatic amino acid a 99.8 7.2E-18 1.6E-22 180.3 30.4 302 183-568 71-388 (391)
177 PRK08153 histidinol-phosphate 99.8 4E-18 8.8E-23 180.9 28.0 289 181-567 69-364 (369)
178 TIGR02379 ECA_wecE TDP-4-keto- 99.8 3E-17 6.4E-22 174.2 34.4 329 178-566 30-375 (376)
179 PLN03227 serine palmitoyltrans 99.8 1.4E-17 3E-22 177.8 31.6 324 173-569 39-383 (392)
180 PRK06358 threonine-phosphate d 99.8 1.1E-17 2.3E-22 176.7 29.5 287 181-566 56-353 (354)
181 PRK06084 O-acetylhomoserine am 99.8 1.5E-17 3.2E-22 178.9 31.1 161 179-362 58-220 (425)
182 PRK07269 cystathionine gamma-s 99.8 3.6E-18 7.8E-23 180.2 25.5 296 178-567 53-363 (364)
183 PLN02656 tyrosine transaminase 99.8 6.5E-18 1.4E-22 181.8 28.0 303 182-571 76-406 (409)
184 PRK07366 succinyldiaminopimela 99.8 5.2E-18 1.1E-22 181.3 27.1 298 183-566 72-388 (388)
185 PRK06425 histidinol-phosphate 99.8 1.1E-17 2.3E-22 175.1 28.4 283 181-567 42-332 (332)
186 PRK03317 histidinol-phosphate 99.8 8.3E-18 1.8E-22 178.4 27.6 287 182-569 68-365 (368)
187 PRK06836 aspartate aminotransf 99.8 1.5E-17 3.3E-22 178.1 29.6 292 182-568 76-391 (394)
188 PF01041 DegT_DnrJ_EryC1: DegT 99.8 3.6E-17 7.9E-22 173.1 32.1 318 178-563 24-363 (363)
189 COG0156 BioF 7-keto-8-aminopel 99.8 1.2E-17 2.6E-22 174.6 27.6 304 169-565 76-387 (388)
190 PRK07050 cystathionine beta-ly 99.8 2.6E-18 5.7E-23 183.3 23.1 168 178-369 64-236 (394)
191 PRK15481 transcriptional regul 99.8 2.1E-17 4.6E-22 179.0 30.5 294 182-567 124-430 (431)
192 PRK07777 aminotransferase; Val 99.8 2E-17 4.3E-22 176.7 29.5 305 179-566 65-384 (387)
193 PRK02610 histidinol-phosphate 99.8 1.5E-17 3.2E-22 176.9 28.4 289 182-568 69-371 (374)
194 cd00615 Orn_deC_like Ornithine 99.8 6.2E-19 1.3E-23 181.2 17.2 224 178-447 58-293 (294)
195 PRK06107 aspartate aminotransf 99.8 1.3E-17 2.7E-22 179.1 28.0 306 178-568 73-400 (402)
196 PRK09082 methionine aminotrans 99.8 9.7E-18 2.1E-22 179.1 26.4 303 178-564 70-385 (386)
197 PRK08247 cystathionine gamma-s 99.8 1E-17 2.3E-22 177.3 26.4 299 178-568 51-364 (366)
198 PRK06290 aspartate aminotransf 99.8 1.8E-17 3.9E-22 178.1 28.3 297 183-568 85-405 (410)
199 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 7.2E-17 1.6E-21 173.7 32.9 163 178-363 56-220 (418)
200 PRK06434 cystathionine gamma-l 99.8 1.5E-17 3.2E-22 176.0 26.9 301 178-567 63-383 (384)
201 PRK08636 aspartate aminotransf 99.8 2.8E-17 6.1E-22 176.5 29.5 309 183-568 75-400 (403)
202 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 8E-17 1.7E-21 171.3 32.6 330 178-566 30-374 (375)
203 PRK14809 histidinol-phosphate 99.8 2E-17 4.4E-22 174.7 27.9 283 182-567 68-356 (357)
204 PRK03967 histidinol-phosphate 99.8 2.5E-17 5.4E-22 172.6 28.3 206 111-370 19-228 (337)
205 PRK04311 selenocysteine syntha 99.8 1.1E-16 2.4E-21 172.8 33.5 214 110-370 85-315 (464)
206 TIGR00474 selA seryl-tRNA(sec) 99.8 1.1E-16 2.3E-21 172.5 33.0 214 110-370 80-310 (454)
207 COG0076 GadB Glutamate decarbo 99.8 2.9E-17 6.4E-22 176.7 28.6 278 178-506 100-402 (460)
208 PRK15407 lipopolysaccharide bi 99.8 9.1E-17 2E-21 173.5 31.8 337 179-567 63-435 (438)
209 PRK08068 transaminase; Reviewe 99.8 4.1E-17 8.8E-22 174.4 28.5 293 182-563 73-384 (389)
210 PLN00143 tyrosine/nicotianamin 99.8 4.4E-17 9.6E-22 175.2 28.8 302 183-568 78-404 (409)
211 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 3.2E-17 7E-22 173.1 27.0 306 173-567 49-386 (386)
212 PRK08175 aminotransferase; Val 99.8 4.8E-17 1E-21 174.3 28.8 304 183-570 71-391 (395)
213 PRK06702 O-acetylhomoserine am 99.8 6.4E-17 1.4E-21 173.1 29.6 161 178-360 60-222 (432)
214 TIGR01140 L_thr_O3P_dcar L-thr 99.8 2.3E-17 5.1E-22 172.4 25.0 271 182-562 50-329 (330)
215 TIGR03538 DapC_gpp succinyldia 99.8 4.2E-17 9.1E-22 174.6 27.2 298 183-566 68-393 (393)
216 PRK07049 methionine gamma-lyas 99.8 7.4E-17 1.6E-21 173.7 29.1 173 181-369 85-265 (427)
217 PRK07392 threonine-phosphate d 99.8 6.6E-17 1.4E-21 171.0 28.3 289 182-568 60-359 (360)
218 PLN02376 1-aminocyclopropane-1 99.8 4.9E-17 1.1E-21 178.2 28.0 305 183-568 98-438 (496)
219 cd00610 OAT_like Acetyl ornith 99.8 9.2E-17 2E-21 172.9 29.5 344 110-566 34-413 (413)
220 PRK03244 argD acetylornithine 99.8 1.7E-16 3.7E-21 170.1 31.4 289 181-568 87-394 (398)
221 PRK14808 histidinol-phosphate 99.8 1.3E-16 2.8E-21 167.0 28.8 270 182-565 59-334 (335)
222 PRK09148 aminotransferase; Val 99.8 1E-16 2.2E-21 172.3 28.1 301 183-568 72-390 (405)
223 PRK09147 succinyldiaminopimela 99.8 1.2E-16 2.6E-21 171.3 28.3 299 183-567 69-395 (396)
224 PRK00854 rocD ornithine--oxo-a 99.8 5E-16 1.1E-20 166.7 33.1 291 179-567 83-400 (401)
225 PLN02450 1-aminocyclopropane-1 99.8 1.5E-16 3.2E-21 173.7 28.9 307 183-570 90-432 (468)
226 COG1167 ARO8 Transcriptional r 99.8 3.5E-16 7.5E-21 170.0 30.5 305 179-570 136-457 (459)
227 PF00155 Aminotran_1_2: Aminot 99.8 4.5E-17 9.6E-22 172.2 23.0 297 181-562 46-363 (363)
228 PLN02607 1-aminocyclopropane-1 99.8 2.4E-16 5.1E-21 170.9 28.1 308 182-568 98-437 (447)
229 PLN02955 8-amino-7-oxononanoat 99.8 5.5E-16 1.2E-20 165.8 30.1 295 178-569 146-462 (476)
230 PRK10534 L-threonine aldolase; 99.8 8.2E-17 1.8E-21 168.4 23.5 289 179-567 34-332 (333)
231 PRK07505 hypothetical protein; 99.8 7.7E-16 1.7E-20 165.3 31.3 338 110-569 44-400 (402)
232 PRK13238 tnaA tryptophanase/L- 99.8 4.7E-16 1E-20 168.7 29.9 316 181-567 80-432 (460)
233 COG1168 MalY Bifunctional PLP- 99.8 1.2E-15 2.6E-20 154.3 29.7 333 122-568 38-386 (388)
234 PRK04073 rocD ornithine--oxo-a 99.8 1.1E-15 2.4E-20 163.7 31.2 326 109-566 37-395 (396)
235 COG2873 MET17 O-acetylhomoseri 99.7 1.8E-15 3.9E-20 151.8 29.4 166 178-366 61-228 (426)
236 PRK05664 threonine-phosphate d 99.7 1.2E-15 2.5E-20 159.5 29.1 272 182-568 52-328 (330)
237 TIGR00461 gcvP glycine dehydro 99.7 4.7E-15 1E-19 169.0 35.6 324 178-576 529-876 (939)
238 PLN02231 alanine transaminase 99.7 1E-15 2.2E-20 169.0 29.2 313 182-573 171-531 (534)
239 PRK06855 aminotransferase; Val 99.7 1.4E-15 3.1E-20 164.6 29.9 302 183-568 77-429 (433)
240 TIGR03539 DapC_actino succinyl 99.7 5.5E-16 1.2E-20 163.8 25.8 282 179-562 60-356 (357)
241 cd01494 AAT_I Aspartate aminot 99.7 9.9E-17 2.1E-21 149.7 17.8 164 181-361 2-170 (170)
242 COG2008 GLY1 Threonine aldolas 99.7 1.7E-16 3.6E-21 160.1 19.4 294 178-566 34-341 (342)
243 TIGR03576 pyridox_MJ0158 pyrid 99.7 1.2E-15 2.7E-20 160.0 26.7 282 178-566 53-345 (346)
244 PF00282 Pyridoxal_deC: Pyrido 99.7 1.9E-15 4E-20 159.9 27.7 306 112-481 40-373 (373)
245 PRK07865 N-succinyldiaminopime 99.7 1.2E-15 2.6E-20 161.7 25.9 279 183-563 66-363 (364)
246 TIGR00707 argD acetylornithine 99.7 2.9E-15 6.2E-20 159.5 28.6 289 178-566 68-379 (379)
247 PRK06959 putative threonine-ph 99.7 3E-15 6.5E-20 157.0 27.7 271 182-568 56-333 (339)
248 KOG1368 Threonine aldolase [Am 99.7 4E-16 8.8E-21 151.6 18.5 295 181-567 58-368 (384)
249 PRK05839 hypothetical protein; 99.7 1.1E-14 2.3E-19 155.0 31.2 176 179-369 64-255 (374)
250 TIGR03542 DAPAT_plant LL-diami 99.7 1.9E-15 4.1E-20 162.3 25.6 297 182-566 78-402 (402)
251 COG0112 GlyA Glycine/serine hy 99.7 2.2E-15 4.8E-20 152.8 24.3 342 118-568 33-390 (413)
252 PRK09440 avtA valine--pyruvate 99.7 1.9E-15 4E-20 163.1 24.4 303 183-568 78-411 (416)
253 PLN02672 methionine S-methyltr 99.7 2.9E-14 6.3E-19 165.0 35.2 303 179-567 734-1079(1082)
254 PTZ00125 ornithine aminotransf 99.7 8.3E-15 1.8E-19 157.2 28.9 334 110-568 29-395 (400)
255 COG1932 SerC Phosphoserine ami 99.7 6.1E-15 1.3E-19 148.7 24.9 304 178-568 49-363 (365)
256 PRK07590 L,L-diaminopimelate a 99.7 3.7E-15 8E-20 160.4 24.5 302 182-566 79-409 (409)
257 COG0626 MetC Cystathionine bet 99.7 9.9E-15 2.2E-19 152.6 26.1 304 178-568 62-394 (396)
258 KOG0259 Tyrosine aminotransfer 99.7 1.7E-14 3.6E-19 145.0 25.9 311 182-572 106-437 (447)
259 TIGR03801 asp_4_decarbox aspar 99.7 4.6E-14 1E-18 153.9 31.4 151 200-363 157-327 (521)
260 PRK08354 putative aminotransfe 99.7 2.1E-13 4.5E-18 141.4 33.0 149 182-360 43-196 (311)
261 TIGR00461 gcvP glycine dehydro 99.7 3.4E-14 7.4E-19 162.1 29.3 305 178-563 108-426 (939)
262 PF00464 SHMT: Serine hydroxym 99.7 5.7E-15 1.2E-19 154.9 21.2 301 118-505 27-359 (399)
263 cd00617 Tnase_like Tryptophana 99.7 6.5E-14 1.4E-18 150.2 29.2 317 181-569 55-409 (431)
264 PTZ00376 aspartate aminotransf 99.7 2.6E-14 5.7E-19 153.5 26.0 290 183-567 76-402 (404)
265 PRK01278 argD acetylornithine 99.6 6.2E-14 1.4E-18 149.9 27.7 331 109-568 28-388 (389)
266 PRK09275 aspartate aminotransf 99.6 4.3E-14 9.4E-19 154.4 26.3 150 199-363 162-328 (527)
267 PRK02627 acetylornithine amino 99.6 9.2E-14 2E-18 148.8 28.6 292 178-568 80-394 (396)
268 PRK09257 aromatic amino acid a 99.6 5E-14 1.1E-18 151.0 26.3 291 183-566 73-396 (396)
269 KOG0053 Cystathionine beta-lya 99.6 3.9E-14 8.6E-19 146.3 24.1 168 180-369 78-248 (409)
270 TIGR03531 selenium_SpcS O-phos 99.6 6.9E-14 1.5E-18 149.7 26.9 322 178-565 104-443 (444)
271 PRK08637 hypothetical protein; 99.6 1.5E-13 3.2E-18 147.0 28.4 172 182-361 47-242 (388)
272 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 1.2E-14 2.6E-19 153.2 19.5 280 178-505 65-398 (417)
273 PLN02624 ornithine-delta-amino 99.6 3.1E-13 6.6E-18 147.7 30.4 342 109-571 72-447 (474)
274 PRK15029 arginine decarboxylas 99.6 2.2E-13 4.7E-18 153.5 29.5 234 178-450 204-465 (755)
275 TIGR01885 Orn_aminotrans ornit 99.6 7.5E-13 1.6E-17 142.2 32.3 297 178-567 78-401 (401)
276 KOG0257 Kynurenine aminotransf 99.6 2.9E-14 6.3E-19 145.7 20.0 179 178-371 72-270 (420)
277 PRK03715 argD acetylornithine 99.6 4.4E-13 9.4E-18 143.3 29.5 330 110-568 34-393 (395)
278 COG1103 Archaea-specific pyrid 99.6 9.4E-13 2E-17 126.7 27.3 314 179-568 61-380 (382)
279 PRK02936 argD acetylornithine 99.6 8.2E-13 1.8E-17 140.6 29.3 326 110-566 27-377 (377)
280 PLN02368 alanine transaminase 99.6 2.8E-13 6.2E-18 145.1 25.6 181 183-370 111-319 (407)
281 PRK04260 acetylornithine amino 99.6 2E-12 4.4E-17 137.6 29.7 288 183-565 70-374 (375)
282 TIGR03246 arg_catab_astC succi 99.6 3.2E-12 7E-17 137.0 30.8 329 110-568 33-395 (397)
283 PRK05964 adenosylmethionine--8 99.6 2.5E-12 5.4E-17 139.0 30.1 348 109-568 39-422 (423)
284 KOG1360 5-aminolevulinate synt 99.6 1.1E-12 2.4E-17 132.3 25.0 297 180-568 217-524 (570)
285 KOG1383 Glutamate decarboxylas 99.5 2.8E-12 6E-17 132.5 26.8 274 178-505 119-411 (491)
286 KOG0256 1-aminocyclopropane-1- 99.5 1.3E-12 2.7E-17 132.7 23.2 306 182-567 124-460 (471)
287 KOG1359 Glycine C-acetyltransf 99.5 1.1E-12 2.4E-17 127.5 21.2 295 178-569 111-413 (417)
288 TIGR03811 tyr_de_CO2_Ent tyros 99.5 3.6E-11 7.7E-16 133.3 36.0 387 113-567 85-601 (608)
289 PRK05093 argD bifunctional N-s 99.5 1.1E-11 2.5E-16 133.1 29.5 332 110-568 38-400 (403)
290 PRK13578 ornithine decarboxyla 99.5 5.3E-12 1.1E-16 141.0 27.0 238 178-446 173-435 (720)
291 PRK15399 lysine decarboxylase 99.5 6.7E-11 1.4E-15 132.2 31.6 311 178-567 194-558 (713)
292 PRK15400 lysine decarboxylase 99.5 2.2E-11 4.8E-16 136.0 27.8 311 178-567 194-558 (714)
293 PRK12381 bifunctional succinyl 99.5 2E-11 4.4E-16 131.3 26.3 332 110-568 37-399 (406)
294 TIGR02618 tyr_phenol_ly tyrosi 99.5 3.9E-11 8.4E-16 127.2 27.2 314 181-569 73-427 (450)
295 TIGR02407 ectoine_ectB diamino 99.4 9.6E-11 2.1E-15 126.1 30.4 347 108-567 31-411 (412)
296 PRK13237 tyrosine phenol-lyase 99.4 1.3E-10 2.8E-15 123.6 30.0 312 181-569 80-434 (460)
297 COG4992 ArgD Ornithine/acetylo 99.4 9.5E-11 2.1E-15 121.0 27.8 351 88-569 19-399 (404)
298 PLN02397 aspartate transaminas 99.4 2.8E-11 6E-16 130.8 25.2 293 182-567 94-420 (423)
299 PRK11522 putrescine--2-oxoglut 99.4 8.9E-11 1.9E-15 127.6 28.6 337 108-568 78-451 (459)
300 PRK08117 4-aminobutyrate amino 99.4 1.1E-10 2.4E-15 126.5 29.0 346 110-568 41-429 (433)
301 TIGR03372 putres_am_tran putre 99.4 1.4E-10 3E-15 125.3 29.1 335 108-566 71-442 (442)
302 PRK08360 4-aminobutyrate amino 99.4 2E-10 4.3E-15 124.5 30.3 348 109-568 38-426 (443)
303 COG0160 GabT 4-aminobutyrate a 99.4 3.3E-10 7.1E-15 120.3 30.9 350 108-568 52-445 (447)
304 PLN02760 4-aminobutyrate:pyruv 99.4 2E-10 4.3E-15 126.1 29.8 418 42-568 11-491 (504)
305 PRK09264 diaminobutyrate--2-ox 99.4 3E-10 6.4E-15 122.8 30.7 347 108-568 35-416 (425)
306 KOG0634 Aromatic amino acid am 99.4 3.1E-10 6.8E-15 116.4 28.5 322 178-571 103-469 (472)
307 PRK06541 hypothetical protein; 99.4 4.3E-10 9.3E-15 122.5 30.3 348 110-568 50-455 (460)
308 KOG0633 Histidinol phosphate a 99.4 3.7E-11 7.9E-16 115.3 17.9 282 193-566 83-375 (375)
309 PRK13360 omega amino acid--pyr 99.4 7E-10 1.5E-14 120.3 30.1 351 109-568 43-440 (442)
310 PRK09792 4-aminobutyrate trans 99.4 6.5E-10 1.4E-14 120.0 29.8 351 109-567 37-420 (421)
311 PRK06062 hypothetical protein; 99.4 5E-10 1.1E-14 121.7 28.9 346 108-568 49-445 (451)
312 TIGR00713 hemL glutamate-1-sem 99.4 3.4E-10 7.5E-15 122.5 27.6 335 109-568 45-422 (423)
313 PLN00144 acetylornithine trans 99.4 3.7E-10 7.9E-15 120.4 27.2 330 109-568 12-380 (382)
314 KOG1357 Serine palmitoyltransf 99.4 4.3E-11 9.4E-16 123.0 18.9 305 178-569 181-503 (519)
315 PRK05769 4-aminobutyrate amino 99.3 1.5E-09 3.2E-14 117.8 31.0 345 108-568 50-439 (441)
316 PRK04612 argD acetylornithine 99.3 3.9E-10 8.5E-15 121.0 26.0 336 109-568 37-403 (408)
317 KOG2467 Glycine/serine hydroxy 99.3 6.9E-10 1.5E-14 111.3 25.4 352 118-566 47-424 (477)
318 PRK04013 argD acetylornithine/ 99.3 1.2E-09 2.5E-14 115.4 28.6 315 109-568 21-360 (364)
319 TIGR00700 GABAtrnsam 4-aminobu 99.3 3.8E-09 8.2E-14 114.1 32.5 348 109-567 30-419 (420)
320 PRK07495 4-aminobutyrate amino 99.3 2.2E-09 4.7E-14 115.9 30.3 352 108-568 36-421 (425)
321 PRK09221 beta alanine--pyruvat 99.3 2.8E-09 6E-14 115.7 31.1 352 109-568 46-443 (445)
322 COG1982 LdcC Arginine/lysine/o 99.3 4E-10 8.7E-15 121.3 24.1 304 179-564 70-404 (557)
323 COG0403 GcvP Glycine cleavage 99.3 1.5E-09 3.3E-14 111.6 27.1 376 91-565 58-447 (450)
324 PRK06058 4-aminobutyrate amino 99.3 3.4E-09 7.4E-14 115.2 31.5 351 109-568 53-442 (443)
325 PRK06777 4-aminobutyrate amino 99.3 3.1E-09 6.8E-14 114.7 30.7 351 109-567 37-420 (421)
326 PRK07678 aminotransferase; Val 99.3 2.7E-09 5.8E-14 116.1 29.3 353 110-568 45-449 (451)
327 PRK07986 adenosylmethionine--8 99.3 2.2E-09 4.8E-14 115.8 28.3 345 109-569 40-424 (428)
328 PF01212 Beta_elim_lyase: Beta 99.3 1.2E-11 2.6E-16 126.2 10.0 176 178-367 28-214 (290)
329 KOG2790 Phosphoserine aminotra 99.3 1.4E-09 3.1E-14 105.6 23.5 346 118-568 13-368 (370)
330 PRK12403 putative aminotransfe 99.3 2.3E-09 5E-14 116.9 28.3 350 109-568 51-452 (460)
331 PF02347 GDC-P: Glycine cleava 99.3 5.2E-10 1.1E-14 118.2 22.2 240 178-449 109-364 (429)
332 PRK06173 adenosylmethionine--8 99.3 4.9E-09 1.1E-13 113.2 30.3 346 109-570 41-427 (429)
333 COG3977 Alanine-alpha-ketoisov 99.3 1.9E-09 4.2E-14 105.6 23.9 307 178-570 77-413 (417)
334 PRK08088 4-aminobutyrate amino 99.3 7.6E-09 1.7E-13 112.0 31.1 350 109-568 38-423 (425)
335 PRK08593 4-aminobutyrate amino 99.3 3.6E-09 7.8E-14 114.9 28.6 347 109-568 39-429 (445)
336 PRK06918 4-aminobutyrate amino 99.3 4.6E-09 9.9E-14 114.5 29.3 353 108-569 50-444 (451)
337 PRK07036 hypothetical protein; 99.3 1E-08 2.2E-13 111.9 32.1 360 109-577 48-464 (466)
338 PRK00062 glutamate-1-semialdeh 99.3 3.6E-09 7.9E-14 114.5 28.0 338 110-568 48-424 (426)
339 PRK07482 hypothetical protein; 99.2 1.2E-08 2.6E-13 111.3 31.5 355 108-568 46-454 (461)
340 PRK06105 aminotransferase; Pro 99.2 1.3E-08 2.7E-13 111.1 31.6 350 109-568 45-449 (460)
341 PRK00615 glutamate-1-semialdeh 99.2 4.8E-09 1E-13 113.3 27.5 343 110-571 51-431 (433)
342 PRK07480 putative aminotransfe 99.2 1.1E-08 2.5E-13 111.3 30.5 349 109-568 47-448 (456)
343 PRK06082 4-aminobutyrate amino 99.2 1.1E-08 2.4E-13 111.4 29.8 340 110-568 70-451 (459)
344 COG1921 SelA Selenocysteine sy 99.2 8.3E-10 1.8E-14 114.0 18.8 211 110-372 26-247 (395)
345 COG1003 GcvP Glycine cleavage 99.2 1.1E-08 2.4E-13 105.3 26.6 314 178-568 108-447 (496)
346 PRK05639 4-aminobutyrate amino 99.2 1.7E-08 3.6E-13 109.9 29.7 347 110-569 51-444 (457)
347 PRK05965 hypothetical protein; 99.2 3.2E-08 7E-13 107.9 31.4 354 109-569 43-448 (459)
348 PRK06149 hypothetical protein; 99.2 3.8E-08 8.3E-13 116.6 33.7 308 179-568 624-970 (972)
349 PRK06943 adenosylmethionine--8 99.2 3.2E-08 6.9E-13 107.7 30.4 352 109-571 51-449 (453)
350 PRK05630 adenosylmethionine--8 99.2 3E-08 6.5E-13 107.0 29.7 344 109-568 37-420 (422)
351 TIGR00709 dat 2,4-diaminobutyr 99.2 4.9E-08 1.1E-12 106.1 31.5 348 109-568 36-435 (442)
352 PRK07483 hypothetical protein; 99.2 3.4E-08 7.4E-13 107.2 29.9 356 109-568 27-437 (443)
353 TIGR00508 bioA adenosylmethion 99.2 5.2E-08 1.1E-12 105.4 31.2 341 110-568 43-426 (427)
354 PRK07046 aminotransferase; Val 99.2 2.8E-08 6.1E-13 108.1 29.2 336 110-568 73-450 (453)
355 PRK07481 hypothetical protein; 99.2 2.5E-08 5.4E-13 108.5 28.7 353 109-568 39-445 (449)
356 PRK06917 hypothetical protein; 99.1 6E-08 1.3E-12 105.4 30.9 357 109-569 28-438 (447)
357 TIGR00699 GABAtrns_euk 4-amino 99.1 1.7E-08 3.7E-13 109.5 26.4 215 265-566 238-464 (464)
358 PRK12389 glutamate-1-semialdeh 99.1 5.1E-08 1.1E-12 105.6 30.1 335 109-568 50-427 (428)
359 PRK12566 glycine dehydrogenase 99.1 1.8E-08 3.9E-13 115.2 26.5 303 178-563 123-439 (954)
360 PRK06148 hypothetical protein; 99.1 5.6E-08 1.2E-12 115.4 31.9 348 109-568 621-1010(1013)
361 PLN02482 glutamate-1-semialdeh 99.1 4.7E-08 1E-12 106.7 28.5 333 110-568 97-473 (474)
362 KOG0628 Aromatic-L-amino-acid/ 99.1 1.2E-07 2.6E-12 98.4 28.6 322 178-568 112-471 (511)
363 PRK06938 diaminobutyrate--2-ox 99.1 1E-07 2.2E-12 104.0 29.6 350 108-568 59-460 (464)
364 COG0001 HemL Glutamate-1-semia 99.1 8.3E-08 1.8E-12 100.5 27.2 331 110-568 51-428 (432)
365 PRK07030 adenosylmethionine--8 99.1 2E-07 4.3E-12 101.8 30.9 351 109-569 44-447 (466)
366 PRK06916 adenosylmethionine--8 99.1 9.4E-08 2E-12 104.3 28.0 349 109-568 53-455 (460)
367 PRK06931 diaminobutyrate--2-ox 99.0 4.4E-07 9.5E-12 99.0 31.4 350 109-568 55-454 (459)
368 PF12897 Aminotran_MocR: Alani 99.0 1.2E-07 2.6E-12 97.0 23.8 307 181-573 71-420 (425)
369 PRK08297 L-lysine aminotransfe 99.0 3.4E-07 7.3E-12 99.5 28.0 216 266-568 213-441 (443)
370 PF03841 SelA: L-seryl-tRNA se 99.0 4.5E-10 9.7E-15 115.1 4.9 173 179-370 47-235 (367)
371 TIGR03251 LAT_fam L-lysine 6-t 99.0 4.2E-07 9.1E-12 98.5 28.3 203 282-564 217-430 (431)
372 COG1448 TyrB Aspartate/tyrosin 98.9 5.1E-08 1.1E-12 99.5 18.6 340 111-565 33-395 (396)
373 PRK08742 adenosylmethionine--8 98.9 5.7E-07 1.2E-11 98.3 27.9 352 108-568 60-467 (472)
374 COG0161 BioA Adenosylmethionin 98.9 4.9E-07 1.1E-11 95.8 26.3 308 181-569 89-444 (449)
375 PRK06209 glutamate-1-semialdeh 98.9 8.8E-07 1.9E-11 96.0 26.9 209 109-367 45-271 (431)
376 TIGR02617 tnaA_trp_ase tryptop 98.9 5.4E-07 1.2E-11 95.2 23.9 320 180-569 75-442 (467)
377 PF06838 Met_gamma_lyase: Meth 98.8 2.4E-06 5.1E-11 87.1 23.6 168 180-369 55-246 (403)
378 KOG1402 Ornithine aminotransfe 98.7 1.3E-06 2.9E-11 87.0 19.8 299 178-567 100-426 (427)
379 KOG1404 Alanine-glyoxylate ami 98.7 2.9E-06 6.4E-11 86.6 22.5 342 108-562 46-432 (442)
380 KOG0258 Alanine aminotransfera 98.7 5.8E-06 1.2E-10 84.4 24.5 311 181-568 115-473 (475)
381 KOG0629 Glutamate decarboxylas 98.7 3.4E-07 7.3E-12 94.1 14.6 174 181-364 143-338 (510)
382 KOG1358 Serine palmitoyltransf 98.7 2.6E-06 5.7E-11 86.9 20.2 309 179-568 139-465 (467)
383 PF00202 Aminotran_3: Aminotra 98.6 2.6E-06 5.7E-11 89.4 18.3 268 108-449 12-316 (339)
384 PLN02974 adenosylmethionine-8- 98.6 6.4E-05 1.4E-09 86.8 30.8 214 282-566 583-816 (817)
385 PF04864 Alliinase_C: Allinase 98.5 8.4E-07 1.8E-11 89.8 11.0 159 178-365 46-213 (363)
386 KOG2040 Glycine dehydrogenase 98.4 6.9E-05 1.5E-09 80.8 22.4 300 178-566 581-916 (1001)
387 PF05889 SLA_LP_auto_ag: Solub 98.3 1.8E-05 3.9E-10 82.3 16.9 315 180-567 57-389 (389)
388 KOG2040 Glycine dehydrogenase 98.1 1.9E-05 4.2E-10 85.0 12.1 300 181-563 165-478 (1001)
389 COG3033 TnaA Tryptophanase [Am 98.0 0.0029 6.3E-08 64.5 24.6 313 183-569 83-445 (471)
390 COG4100 Cystathionine beta-lya 98.0 6.3E-05 1.4E-09 74.4 12.1 169 182-368 68-256 (416)
391 KOG1401 Acetylornithine aminot 98.0 0.0087 1.9E-07 62.2 27.8 173 183-371 102-299 (433)
392 KOG1412 Aspartate aminotransfe 98.0 0.0007 1.5E-08 67.5 18.5 250 202-505 103-377 (410)
393 KOG1403 Predicted alanine-glyo 96.8 0.078 1.7E-06 53.0 16.9 353 103-567 39-436 (452)
394 KOG1411 Aspartate aminotransfe 95.8 0.063 1.4E-06 54.7 10.1 248 200-504 120-396 (427)
395 KOG1405 4-aminobutyrate aminot 95.8 0.36 7.9E-06 49.5 15.2 216 264-567 254-482 (484)
396 PLN02994 1-aminocyclopropane-1 94.5 0.098 2.1E-06 48.2 6.5 53 179-232 96-150 (153)
397 COG1184 GCD2 Translation initi 70.9 47 0.001 34.0 10.9 124 178-319 99-228 (301)
398 PF02310 B12-binding: B12 bind 64.1 45 0.00098 28.6 8.4 81 229-323 9-92 (121)
399 cd02070 corrinoid_protein_B12- 59.5 76 0.0017 30.4 9.8 97 229-344 91-192 (201)
400 COG0552 FtsY Signal recognitio 55.0 1.4E+02 0.003 31.1 11.0 133 178-320 107-268 (340)
401 TIGR02370 pyl_corrinoid methyl 54.6 92 0.002 29.8 9.4 98 229-345 93-195 (197)
402 PRK11070 ssDNA exonuclease Rec 49.2 1.9E+02 0.0041 32.7 12.0 102 205-321 53-160 (575)
403 PF10518 TAT_signal: TAT (twin 48.8 8.1 0.00018 24.1 0.7 12 48-59 2-13 (26)
404 cd02067 B12-binding B12 bindin 48.0 1.4E+02 0.003 25.6 8.7 81 229-323 8-92 (119)
405 PRK08535 translation initiatio 46.9 1.8E+02 0.0038 30.1 10.6 116 182-319 104-229 (310)
406 TIGR00511 ribulose_e2b2 ribose 46.7 1.7E+02 0.0036 30.2 10.3 118 181-319 98-224 (301)
407 PRK02261 methylaspartate mutas 43.9 1.9E+02 0.004 26.0 9.0 78 229-320 12-93 (137)
408 KOG0630 Predicted pyridoxal-de 43.7 1.4E+02 0.0031 32.5 9.2 118 241-362 246-375 (838)
409 TIGR02026 BchE magnesium-proto 42.5 83 0.0018 34.9 7.9 75 237-323 25-103 (497)
410 PF05368 NmrA: NmrA-like famil 39.9 82 0.0018 30.5 6.7 60 244-317 40-99 (233)
411 COG1058 CinA Predicted nucleot 39.5 1.2E+02 0.0027 30.3 7.7 86 222-320 9-95 (255)
412 COG2870 RfaE ADP-heptose synth 39.3 88 0.0019 33.4 6.8 65 248-319 113-178 (467)
413 TIGR01362 KDO8P_synth 3-deoxy- 38.4 93 0.002 31.1 6.6 62 259-324 123-187 (258)
414 PRK12724 flagellar biosynthesi 37.5 4.7E+02 0.01 28.4 12.2 128 179-322 195-345 (432)
415 PF13407 Peripla_BP_4: Peripla 36.9 1.2E+02 0.0026 29.5 7.5 73 232-317 12-85 (257)
416 KOG3843 Predicted serine hydro 36.5 94 0.002 31.1 6.2 182 182-374 60-253 (432)
417 COG1066 Sms Predicted ATP-depe 36.4 1.7E+02 0.0037 31.5 8.5 118 237-366 132-276 (456)
418 PRK11889 flhF flagellar biosyn 36.1 4.7E+02 0.01 28.3 11.7 131 178-320 217-361 (436)
419 PRK12723 flagellar biosynthesi 35.3 5.9E+02 0.013 27.3 13.8 129 179-322 149-298 (388)
420 PF01008 IF-2B: Initiation fac 33.0 4.1E+02 0.0089 26.7 10.8 122 181-320 90-218 (282)
421 KOG0025 Zn2+-binding dehydroge 33.0 1.5E+02 0.0033 30.3 7.1 70 199-273 137-206 (354)
422 PF00448 SRP54: SRP54-type pro 32.5 81 0.0018 30.2 5.1 104 208-322 16-126 (196)
423 TIGR03573 WbuX N-acetyl sugar 32.5 4.1E+02 0.0088 27.8 10.8 119 181-321 42-169 (343)
424 PRK08335 translation initiatio 32.4 4.9E+02 0.011 26.4 10.8 114 182-317 93-216 (275)
425 PLN02672 methionine S-methyltr 31.7 1.5E+02 0.0033 36.1 8.1 125 183-323 430-568 (1082)
426 PF09791 Oxidored-like: Oxidor 31.0 29 0.00062 25.2 1.3 12 10-21 15-26 (48)
427 TIGR00959 ffh signal recogniti 30.0 4.2E+02 0.009 28.8 10.5 130 178-320 71-223 (428)
428 cd02069 methionine_synthase_B1 29.5 4.6E+02 0.01 25.4 9.9 98 229-345 97-203 (213)
429 smart00857 Resolvase Resolvase 28.8 2.5E+02 0.0055 24.8 7.6 77 238-318 22-101 (148)
430 PRK15408 autoinducer 2-binding 28.3 2.7E+02 0.0058 29.0 8.6 76 230-317 35-110 (336)
431 PF04131 NanE: Putative N-acet 27.9 95 0.0021 29.6 4.5 67 264-345 53-121 (192)
432 cd02065 B12-binding_like B12 b 27.6 3.8E+02 0.0083 22.7 9.6 81 229-324 8-92 (125)
433 COG1606 ATP-utilizing enzymes 27.5 4.8E+02 0.01 26.2 9.3 113 179-323 5-124 (269)
434 PF15608 PELOTA_1: PELOTA RNA 27.1 3.8E+02 0.0082 22.8 7.4 66 182-256 22-88 (100)
435 PRK05198 2-dehydro-3-deoxyphos 27.0 1.8E+02 0.0039 29.3 6.4 62 259-324 131-195 (264)
436 PRK14974 cell division protein 26.6 4.2E+02 0.0092 27.7 9.6 133 179-321 109-264 (336)
437 PRK05703 flhF flagellar biosyn 26.1 8.6E+02 0.019 26.3 12.8 127 180-320 198-341 (424)
438 PLN03033 2-dehydro-3-deoxyphos 26.1 1.8E+02 0.0039 29.6 6.3 62 259-324 137-201 (290)
439 PRK01964 4-oxalocrotonate taut 25.1 92 0.002 23.6 3.3 32 178-209 18-49 (64)
440 TIGR01501 MthylAspMutase methy 25.0 3.1E+02 0.0067 24.6 7.1 70 229-312 10-80 (134)
441 COG3010 NanE Putative N-acetyl 24.7 1.3E+02 0.0028 29.1 4.8 69 265-349 88-160 (229)
442 PRK13397 3-deoxy-7-phosphohept 24.6 3.8E+02 0.0083 26.8 8.4 118 186-324 72-196 (250)
443 smart00642 Aamy Alpha-amylase 24.3 57 0.0012 30.3 2.4 34 287-320 57-91 (166)
444 COG0159 TrpA Tryptophan syntha 24.2 5.4E+02 0.012 26.0 9.3 50 240-301 139-188 (265)
445 TIGR01409 TAT_signal_seq Tat ( 24.1 32 0.00069 21.9 0.4 11 49-59 2-12 (29)
446 PRK02220 4-oxalocrotonate taut 24.0 1E+02 0.0022 22.9 3.4 30 178-207 18-47 (61)
447 PF08057 Ery_res_leader2: Eryt 22.9 34 0.00075 17.5 0.3 10 574-583 5-14 (14)
448 KOG1467 Translation initiation 22.9 4.3E+02 0.0093 29.0 8.6 12 76-87 259-270 (556)
449 cd05013 SIS_RpiR RpiR-like pro 22.7 4.8E+02 0.01 22.2 8.3 32 282-317 60-92 (139)
450 PRK10416 signal recognition pa 21.7 9E+02 0.02 25.0 13.4 132 178-320 86-243 (318)
451 cd02072 Glm_B12_BD B12 binding 21.6 4.2E+02 0.009 23.6 7.2 71 240-324 19-93 (128)
452 PRK10867 signal recognition pa 21.3 8.1E+02 0.018 26.7 10.8 128 178-320 72-224 (433)
453 PRK10014 DNA-binding transcrip 21.0 8.8E+02 0.019 24.6 12.0 75 231-319 77-152 (342)
454 TIGR03600 phage_DnaB phage rep 21.0 9.4E+02 0.02 25.7 11.4 14 283-296 305-318 (421)
455 TIGR01425 SRP54_euk signal rec 21.0 4E+02 0.0086 29.0 8.2 128 178-320 72-223 (429)
456 PRK13396 3-deoxy-7-phosphohept 20.9 4.4E+02 0.0096 27.8 8.3 121 183-324 155-283 (352)
457 TIGR01361 DAHP_synth_Bsub phos 20.9 4.7E+02 0.01 26.2 8.4 116 188-324 84-206 (260)
458 PRK00745 4-oxalocrotonate taut 20.9 1.2E+02 0.0027 22.5 3.3 33 178-210 18-50 (62)
459 COG0367 AsnB Asparagine syntha 20.8 9.8E+02 0.021 26.8 11.7 120 179-319 214-339 (542)
460 cd07492 Peptidases_S8_8 Peptid 20.4 4.9E+02 0.011 24.9 8.3 84 232-320 45-129 (222)
461 cd00338 Ser_Recombinase Serine 20.2 4.6E+02 0.01 22.6 7.4 77 239-319 22-102 (137)
No 1
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-59 Score=496.64 Aligned_cols=392 Identities=24% Similarity=0.299 Sum_probs=329.6
Q ss_pred hHHHHHhhhccCCCCC---CeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCccccccccccccccc
Q 037063 95 QADRIRAQDYFHLSLN---NYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWL 171 (588)
Q Consensus 95 ~~~~iR~~~f~~l~~~---~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~ 171 (588)
++..+|+ +||.|... +.+|||++++++.|..|++++.++.. ..++|+|.. ....
T Consensus 4 ~~~~~r~-~fp~l~~~~~~~~vylD~aa~~~~p~~V~~a~~~~~~-~~~an~~r~------------------~~~~--- 60 (405)
T COG0520 4 DVAAVRA-DFPALKREVGKPLVYLDNAATSQKPQAVLDAVAEYYR-RYNANVHRG------------------AHTL--- 60 (405)
T ss_pred ChHHHHh-hCHHHhhccCCCeEEecCcccccCCHHHHHHHHHHHH-hhcCCcCcc------------------cchH---
Confidence 4456775 58877422 47999999999999999999876653 345665421 1011
Q ss_pred ccCCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--CCCCCe-EEEcCCCchhHHHHHHHHHHhcC
Q 037063 172 QYGSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--FYSNPR-LLTVYDHENEAAALMIESSKKRG 248 (588)
Q Consensus 172 ~~g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--~~~gd~-ll~~~e~~s~~~~~~~~~a~~~G 248 (588)
+.+..+.++++|+.+++++|+++ .++|+||+|+|+|+++++.++. +++||+ |++..|||+|.++| ..++++.|
T Consensus 61 --~~~~t~~~e~aRe~va~~~~a~~-~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw-~~~~~~~G 136 (405)
T COG0520 61 --AEEATDLYEAAREAVARFLNADS-SDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPW-QELAKRTG 136 (405)
T ss_pred --HHHHHHHHHHHHHHHHHHhCCCC-CCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHH-HHHHHhcC
Confidence 12247899999999999999986 2359999999999999999997 799999 56899999999999 68889999
Q ss_pred CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCC
Q 037063 249 ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDM 327 (588)
Q Consensus 249 ~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~ 327 (588)
++|+++|++ +++.++.+++++.++ ++|+||+++|+||.||.+.|+++| ++||++|++|+||++|++| .
T Consensus 137 a~v~~i~~~-~~g~~~~~~~~~~i~--------~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~--h 205 (405)
T COG0520 137 AKVRVIPLD-DDGLLDLDALEKLIT--------PKTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAG--H 205 (405)
T ss_pred cEEEEEecC-CCCCcCHHHHHHhcC--------CCceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccC--c
Confidence 999999999 899999999999888 899999999999999999999999 9999999999999999998 5
Q ss_pred CCCCCCCCCCcEEEeccCc-cCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 328 DTLGLSLFKPDFLICSFYK-IFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 328 ~~l~l~~~~~D~vv~S~~K-~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
.++|+..+.+||+++|+|| ++| |+|+|+||+|+++++.+.|...|| +++..+.... ...+...+ .+| |.||++
T Consensus 206 ~~idv~~l~~Df~afsgHKwl~g--P~GiGvLy~r~~~l~~l~P~~~gg-~~~~~~~~~~-~~~~~~~p-~rf-e~gTpn 279 (405)
T COG0520 206 LPIDVQELGCDFLAFSGHKWLLG--PTGIGVLYVRKELLEELEPFLGGG-GMIEYVSRDE-GVTLAELP-LRF-EAGTPN 279 (405)
T ss_pred cCCCchhcCCCEEEEcccccccC--CCceEEEEEchHHHhhcCCcccCC-Cceeeecccc-cccccCcc-hhh-ccCCch
Confidence 6677777779999999999 666 999999999999999998888775 6655443211 11121222 288 999999
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGT 486 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~ 486 (588)
+.++ .++.+|+++++++|+++|.+|.+.|.+++.+.|+++ |++++|+|.. ..|+++++|++.+
T Consensus 280 ~~~~---i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~---------~~v~i~g~~~-~~r~~~vsF~v~~---- 342 (405)
T COG0520 280 IAGA---IGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSEL---------PGVEIYGPPD-ADRGGIVSFNVKG---- 342 (405)
T ss_pred HHHH---HhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC---------CCeEEecCCc-ccCceEEEEEeCC----
Confidence 9997 789999999999999999999999999999999984 8899999876 6789999999998
Q ss_pred CcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCcc-EEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 487 RIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVS-VVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 487 ~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~-~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
+++.++.+.|+++||.+|.|++|... +.+. .+.. .+|+|+++|||+||||+|+++|+++
T Consensus 343 -~~~~dv~~~L~~~gI~vr~g~~ca~p------------~~~~-------~~~~~~iR~S~~~YNt~edid~l~~aL~~~ 402 (405)
T COG0520 343 -IHPHDVATLLDEKGIAVRAGHHCAQP------------LHRL-------LGVDATIRASLHLYNTEEDVDRLLEALKKA 402 (405)
T ss_pred -CCHHHHHHHHHhCCeEEEeccccccH------------HHHh-------cCCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 67999999999999999999999632 2222 3332 6999999999999999999999987
Q ss_pred hh
Q 037063 566 LD 567 (588)
Q Consensus 566 l~ 567 (588)
++
T Consensus 403 ~~ 404 (405)
T COG0520 403 LA 404 (405)
T ss_pred hh
Confidence 64
No 2
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=2.6e-59 Score=537.75 Aligned_cols=446 Identities=24% Similarity=0.383 Sum_probs=342.6
Q ss_pred HHHHHhC-CCCCC---chhHHHHHhhhccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCC
Q 037063 81 ANFTKVF-PQYLQ---TDQADRIRAQDYFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPP 156 (588)
Q Consensus 81 ~~f~~~~-p~y~~---~~~~~~iR~~~f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~ 156 (588)
..|+.+| |+|+. ...++.+|+.+||.| .+.+||||||++++++.++++..+.+....++|||+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~R~~~fp~l--~~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~--------- 70 (805)
T PLN02724 2 ESFLKEFGGYYGYPDGPKPIDELRATEFARL--KGVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQS--------- 70 (805)
T ss_pred hhHHhhhcccCCcccchhhHHHHHHHHhhhc--CCCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCc---------
Confidence 4577766 44444 346999998889999 67999999999999887777765555455778886421
Q ss_pred cccccccccccccccccCCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchh
Q 037063 157 FFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENE 235 (588)
Q Consensus 157 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~ 235 (588)
.. +....+.++++|++||+++|+++++++|+||+|+|+|+++++.+++|++||+|++ ..+|++
T Consensus 71 ----------~~-----s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~s- 134 (805)
T PLN02724 71 ----------DS-----SMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNS- 134 (805)
T ss_pred ----------ch-----hhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccc-
Confidence 01 1234788999999999999998777789999999999999999999999999665 455554
Q ss_pred HHHHHHHHHHhcCCEEEEEeccC-------CCCccCH--HHHHHHHhhh--ccccCCCcceEEEEeCCCCCCCccCCHHH
Q 037063 236 AAALMIESSKKRGARVSSAEFAW-------PNLRIHS--GKLMKKIVGK--RKKKKKKKRGLFVFPLQSKVTGARYSYMW 304 (588)
Q Consensus 236 ~~~~~~~~a~~~G~~v~~v~~~~-------~~~~i~~--e~l~~~i~~~--~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~ 304 (588)
.+.| .++++++|++++.++++. ..+.++. ++|++.++.. ......++|+||+++|++|.||.++|+++
T Consensus 135 vl~~-~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~ 213 (805)
T PLN02724 135 VLGI-REYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDL 213 (805)
T ss_pred hHHH-HHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHH
Confidence 5566 578888999999998862 1233433 5566654200 00111256799999999999999999999
Q ss_pred HHHHHHc---------CcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCC
Q 037063 305 MSVAAEK---------GWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSV 375 (588)
Q Consensus 305 I~~a~~~---------g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~ 375 (588)
|+.+++. +|+|+||++|++| ..++|+..+++||+++|+|||+|. |.|+|+||+|+++++.|.|.+.||
T Consensus 214 i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g--~~piDv~~~~~Dfl~~S~HK~~Gg-P~G~G~L~vr~~~~~~l~p~~~GG 290 (805)
T PLN02724 214 VKLIKDNQHSNFSKSGRWMVLLDAAKGCG--TSPPDLSRYPADFVVVSFYKIFGY-PTGLGALLVRRDAAKLLKKKYFGG 290 (805)
T ss_pred HHHHHHhcccccccCcceEEEeehhhhcC--CCCCChhhcCCCEEEEecceeccC-CCCceEEEEehhhhhhhcCCccCC
Confidence 8545542 4799999999998 567788878899999999999995 999999999999988899888775
Q ss_pred CceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCC
Q 037063 376 STIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSE 455 (588)
Q Consensus 376 ~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~ 455 (588)
|++.......+..........+| |.||+|+.++ +++.+||+++.++|+++|.+|+..|++++++.|++++|.+
T Consensus 291 -g~~~~~~~~~~~~~~~~~~~~rf-E~GT~n~~~i---~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~-- 363 (805)
T PLN02724 291 -GTVAASIADIDFVKRRERVEQRF-EDGTISFLSI---AALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGN-- 363 (805)
T ss_pred -CceEEEecccceeeccccHHHHh-cCCCcchhHH---HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCC--
Confidence 45432211100000000111378 9999999997 7889999999999999999999999999999999998876
Q ss_pred CCCCeEEEeCCCC----CCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHH----HHHHHh
Q 037063 456 TGIPLVRIYGPKV----MFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQE----RVRVLE 527 (588)
Q Consensus 456 ~g~~~v~i~~p~~----~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~----~~~~l~ 527 (588)
|.|+|+||++.. ...|+++|+|++.+.+|..+.+.++.++++++||.+|+||+|+++.+..+++. ....+.
T Consensus 364 -g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~ 442 (805)
T PLN02724 364 -GAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFE 442 (805)
T ss_pred -CCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhh
Confidence 678999999751 23589999999999999999999999999999999999999999877643321 122233
Q ss_pred hhcCCCCC---cCC--ccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 528 TRSGTNET---RSG--VSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 528 ~~~~~~~~---~~g--~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
.++.|++. ..+ .+.||+|||+|||+|||++|+++|+++
T Consensus 443 ~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~ 485 (805)
T PLN02724 443 AGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISS 485 (805)
T ss_pred cCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHH
Confidence 44455432 112 149999999999999999999998873
No 3
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-50 Score=410.75 Aligned_cols=370 Identities=16% Similarity=0.152 Sum_probs=306.2
Q ss_pred eeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHH
Q 037063 112 YVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDF 191 (588)
Q Consensus 112 ~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~ 191 (588)
++||||++++++.+.++++|..++.. .++||+|. | .+|.++.++++++|+.||++
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~-~fgNPsS~---------------------H---~~G~~A~~~ve~AR~~iA~l 56 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTE-VFGNPSSL---------------------H---SFGREARKAVEEAREQIAKL 56 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHh-hcCCccch---------------------h---HhHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999877754 48999542 2 24667789999999999999
Q ss_pred hCCCCCCceEEEecCHHHHHHHHHHh--CCCC---CCCeE-EEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCH
Q 037063 192 MNISEDDYTLVFTANQSSAFKLLAES--YPFY---SNPRL-LTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHS 265 (588)
Q Consensus 192 lga~~~e~~vvft~g~T~al~lv~~s--~~~~---~gd~l-l~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~ 265 (588)
+|+++++ |+||+|+|++.|+++.+ +..+ .|.+| ++..||++ ....++.+ +..|.+|.++|++ .+|.+++
T Consensus 57 lga~~~e--IiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~a-Vl~~~~~L-e~~g~~Vtyl~V~-~~G~v~~ 131 (386)
T COG1104 57 LGADPEE--IIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPA-VLNTCRYL-ERQGFEVTYLPVD-SNGLVDL 131 (386)
T ss_pred hCCCCCe--EEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHH-HHHHHHHH-HhcCCeEEEeCCC-CCCeEcH
Confidence 9999855 99999999999999988 4332 35665 57889997 55554444 7889999999999 7999999
Q ss_pred HHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEecc
Q 037063 266 GKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSF 344 (588)
Q Consensus 266 e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~ 344 (588)
++|+++|+ ++|.||++.+++|.+|+++|+++| ++|+++|+++++|++|.++ -.++++....+|++.+|.
T Consensus 132 e~L~~al~--------~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~G--kipi~~~~~~vD~ls~Sa 201 (386)
T COG1104 132 EQLEEALR--------PDTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVG--KIPIDLEELGVDLLSFSA 201 (386)
T ss_pred HHHHHhcC--------CCceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcC--ceeccccccCcceEEeeh
Confidence 99999999 889999999999999999999999 9999999999999999998 356666666799999999
Q ss_pred CccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHH
Q 037063 345 YKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHAD 424 (588)
Q Consensus 345 ~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~ 424 (588)
||+.| |+|+|+||+|+.. ++.|...|| |+- + .+ +.||.|++++ +++..|++...
T Consensus 202 HK~~G--pkGiGaLyv~~~~--~~~p~i~GG-gQE--------------~---g~-RsGTenv~~I---vg~~~A~~~a~ 255 (386)
T COG1104 202 HKFGG--PKGIGALYVRPGV--RLEPLIHGG-GQE--------------R---GL-RSGTENVPGI---VGFGKAAEIAV 255 (386)
T ss_pred hhccC--CCceEEEEECCCC--ccCceeccC-cCC--------------C---CC-CCCCccHHHH---HHHHHHHHHHH
Confidence 99999 9999999997766 578887774 431 1 23 7999999997 88889998876
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEe
Q 037063 425 ALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISL 504 (588)
Q Consensus 425 ~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v 504 (588)
+. ++....|++.|+++|.+.|.+. .|.+.+.+... ..-.++++|.+++ +..+.+...|+.+||.+
T Consensus 256 ~~-~~~~~~~~~~lr~~l~~~l~~~--------~p~~~~~g~~~-~rlP~~~~~~f~g-----v~gE~ll~~L~~~gI~v 320 (386)
T COG1104 256 EE-LEEENARLRKLRDRLEDGLLEI--------IPDVYLNGDDE-PRLPNILNFSFPG-----VEGESLLLALDLAGIAV 320 (386)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHhc--------CCcEEEcCCcc-cCCCCeEEEEeCC-----CcHHHHHHhccccCeEE
Confidence 63 7889999999999999999985 58899888642 1235788999988 66888899999999999
Q ss_pred ccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 505 SCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 505 ~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
++|+.|+.+....+ +.|..-. .+.....+.||+|||.+||+|||+++++.+.+.++..
T Consensus 321 StGSACsS~~~~pS-----hVL~AmG--~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~l 378 (386)
T COG1104 321 STGSACSSGSLEPS-----HVLRAMG--ISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRL 378 (386)
T ss_pred eccccccCCCCCcc-----HHHHHcC--CChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999998766553 2333310 0001122399999999999999999999999987764
No 4
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=5.9e-49 Score=422.17 Aligned_cols=388 Identities=19% Similarity=0.263 Sum_probs=309.7
Q ss_pred hHHHHHhhhccCCCC----CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccc
Q 037063 95 QADRIRAQDYFHLSL----NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSW 170 (588)
Q Consensus 95 ~~~~iR~~~f~~l~~----~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~ 170 (588)
+++.+|. +||.++. .+.+||||++++++|+.+++++.+++. ..++|+++. .+.
T Consensus 4 ~~~~~r~-~fp~~~~~~~~~~~iYld~a~~~~~~~~v~~a~~~~~~-~~~~~~~~~--------------------~~~- 60 (406)
T PRK09295 4 SVEKVRA-DFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYR-HGYAAVHRG--------------------IHT- 60 (406)
T ss_pred ChHHHHh-hCccccCcCCCCceEEEeCcccccCCHHHHHHHHHHHH-hcCCCCCCc--------------------ccH-
Confidence 4567887 6999842 147999999999999999999877664 244565321 010
Q ss_pred cccCCchhHHHHHHHHHHHHHhCC-CCCCceEEEecCHHHHHHHHHHhC---CCCCCCeEE-EcCCCchhHHHHHHHHHH
Q 037063 171 LQYGSEESELESKIRKRIMDFMNI-SEDDYTLVFTANQSSAFKLLAESY---PFYSNPRLL-TVYDHENEAAALMIESSK 245 (588)
Q Consensus 171 ~~~g~~~~~~~~~~r~~ia~~lga-~~~e~~vvft~g~T~al~lv~~s~---~~~~gd~ll-~~~e~~s~~~~~~~~~a~ 245 (588)
.+....+.++++|+.|++++|+ +++ +|+||+|+|+++++++.++ .+++||+|+ +..+|+++...| ...++
T Consensus 61 --~~~~~~~~~~~~r~~la~~~~~~~~~--~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~-~~~~~ 135 (406)
T PRK09295 61 --LSAQATEKMENVRKQAALFINARSAE--ELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPW-QMLCA 135 (406)
T ss_pred --HHHHHHHHHHHHHHHHHHHcCcCCCC--eEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHH-HHHHH
Confidence 0112367889999999999998 444 5999999999999999886 368999955 677888866666 56778
Q ss_pred hcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC
Q 037063 246 KRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS 324 (588)
Q Consensus 246 ~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~ 324 (588)
..|++++.++++ +++.++.++|+++++ ++|++|++++++|+||.++|+++| ++|+++|+++++|++|.++
T Consensus 136 ~~g~~v~~v~~~-~~~~~d~~~l~~~i~--------~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g 206 (406)
T PRK09295 136 RVGAELRVIPLN-PDGTLQLETLPALFD--------ERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVM 206 (406)
T ss_pred HcCcEEEEEecC-CCCCCCHHHHHHhcC--------CCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccC
Confidence 899999999997 678899999999997 689999999999999999999999 9999999999999999887
Q ss_pred CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 325 KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 325 ~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
..++++..+++|++++|+||++| |.|+|+|++++++++.+++...|+ +......... ...+...+ .+| |.||
T Consensus 207 --~~~~~~~~~~~D~~~~s~~K~~g--p~G~G~l~~~~~~~~~~~~~~~g~-~~~~~~~~~~-~~~~~~~~-~r~-e~GT 278 (406)
T PRK09295 207 --HHPVDVQALDCDFYVFSGHKLYG--PTGIGILYVKEALLQEMPPWEGGG-SMIATVSLTE-GTTWAKAP-WRF-EAGT 278 (406)
T ss_pred --ccccCchhcCCCEEEeehhhccC--CCCcEEEEEchHhHhhCCCcccCC-ceeeeeecCC-ccccCCch-hhc-CCCC
Confidence 45566666779999999999988 889999999999888887765442 3322211100 01111111 378 8999
Q ss_pred CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCC
Q 037063 405 SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWN 484 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~ 484 (588)
+++.++ +++.+|++++.++|++++.+|.+.|+++++++|.++ +++++++|. .+.++++|++.+
T Consensus 279 ~~~~~~---~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~---------~~~~~~~~~---~~~~iv~~~~~~-- 341 (406)
T PRK09295 279 PNTGGI---IGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESV---------PDLTLYGPQ---NRLGVIAFNLGK-- 341 (406)
T ss_pred ccHHHH---HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---------CCEEEeCCC---CCceEEEEEECC--
Confidence 999987 889999999999999999999999999999999884 679999873 467899999876
Q ss_pred CCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCc-cEEEEecCCCCCHHHHHHHHHHHH
Q 037063 485 GTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGV-SVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 485 g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~-~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
+++..+.+.|+++||.+++|++|+... +.. .|. +.||+|+|+|||+|||++|+++|+
T Consensus 342 ---~~~~~~~~~L~~~gI~v~~g~~c~~~~-----------~~~--------~~~~~~iRiS~~~ynt~~did~l~~~l~ 399 (406)
T PRK09295 342 ---HHAYDVGSFLDNYGIAVRTGHHCAMPL-----------MAY--------YNVPAMCRASLAMYNTHEEVDRLVAGLQ 399 (406)
T ss_pred ---cCHHHHHHHHHhCCeEEeccccchHHH-----------HHH--------HCCCCEEEEEccCCCCHHHHHHHHHHHH
Confidence 457778888999999999999996321 111 222 289999999999999999999998
Q ss_pred Hhh
Q 037063 564 RFL 566 (588)
Q Consensus 564 ~~l 566 (588)
++.
T Consensus 400 ~i~ 402 (406)
T PRK09295 400 RIH 402 (406)
T ss_pred HHH
Confidence 863
No 5
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=7.4e-47 Score=408.15 Aligned_cols=390 Identities=20% Similarity=0.235 Sum_probs=306.4
Q ss_pred HHHhhhccCCCC----CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCccccccccccccccccc
Q 037063 98 RIRAQDYFHLSL----NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQY 173 (588)
Q Consensus 98 ~iR~~~f~~l~~----~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 173 (588)
.+| .+||.++. ++.+|||++++++.|+.+++++.+++. ...+|+++. .+. .
T Consensus 16 ~~r-~~fp~~~~~~~~~~~iyLd~a~~~~~p~~v~~a~~~~~~-~~~~~~~~~--------------------~~~---~ 70 (424)
T PLN02855 16 ETR-PDFPILDQTVNGSKLVYLDNAATSQKPAAVLDALQDYYE-EYNSNVHRG--------------------IHA---L 70 (424)
T ss_pred HHH-HhCchhccccCCCCeEEeeCccccCCCHHHHHHHHHHHH-hcCCCCCCc--------------------cch---H
Confidence 355 46998842 248999999999999999999877663 234444210 000 0
Q ss_pred CCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhC---CCCCCCeEE-EcCCCchhHHHHHHHHHHhcCC
Q 037063 174 GSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESY---PFYSNPRLL-TVYDHENEAAALMIESSKKRGA 249 (588)
Q Consensus 174 g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~---~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~ 249 (588)
+....+.++++|+.|++++|+++ +++|+||+|+|+++++++.++ .+++||+|+ +..+|+++...| ..+++..|+
T Consensus 71 ~~~~~~~~~~~r~~la~~~~~~~-~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~-~~~a~~~g~ 148 (424)
T PLN02855 71 SAKATDAYELARKKVAAFINAST-SREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPW-QLVAQKTGA 148 (424)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCC-CCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHH-HHHHHHcCC
Confidence 11125678899999999999963 235999999999999999875 368999965 567888766555 667788999
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCC
Q 037063 250 RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMD 328 (588)
Q Consensus 250 ~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~ 328 (588)
+++.++++ +++.++++++++.|+ ++++||++++++|+||.++|+++| ++|+++|++|++|++|+++ ..
T Consensus 149 ~v~~v~~~-~~~~~~~~~l~~~i~--------~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g--~~ 217 (424)
T PLN02855 149 VLKFVGLT-PDEVLDVEQLKELLS--------EKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVP--HM 217 (424)
T ss_pred EEEEEecC-CCCCcCHHHHHHHhc--------cCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcC--Cc
Confidence 99999997 556699999999998 689999999999999999999999 9999999999999999887 34
Q ss_pred CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc
Q 037063 329 TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS 408 (588)
Q Consensus 329 ~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~ 408 (588)
++++..+++||+++|+||++| |.|+|+|+++++.++.+++...|+ +....... +...+...+ .+| +.||+++.
T Consensus 218 ~~~~~~~~~d~~~~s~~K~~g--p~G~G~l~~~~~~~~~~~p~~~g~-~~~~~~~~--~~~~~~~~~-~r~-e~GT~~~~ 290 (424)
T PLN02855 218 PVDVQTLGADFLVASSHKMCG--PTGIGFLWGKSDLLESMPPFLGGG-EMISDVFL--DHSTYAPPP-SRF-EAGTPAIG 290 (424)
T ss_pred CCCchhcCCCEEEeecccccC--CCccEEEEEchhhhhcCCCEecCC-Cceeeeec--CccccCCCh-hhc-cCCChHHH
Confidence 566666779999999999888 889999999999988887766553 22211100 011111111 378 89999999
Q ss_pred chhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCC--CCCcccEEEEEeecCCCC
Q 037063 409 GVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKV--MFDRGPSLAFNVFDWNGT 486 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~--~~~rg~iv~f~~~~~~g~ 486 (588)
++ +++..+++++.++|++++.+|+..|++++++.|+++ ++++++++.. ...++++++|++.+
T Consensus 291 ~~---~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~---------~g~~i~~~~~~~~~~r~~~v~~~~~~---- 354 (424)
T PLN02855 291 EA---IGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSV---------PGVRIYGPKPSEGVGRAALCAFNVEG---- 354 (424)
T ss_pred HH---HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---------CCEEEeCCCcccccCcccEEEEEECC----
Confidence 97 889999999999999999999999999999999884 7899998754 23568899999876
Q ss_pred CcCHHHHHHHHHhC-CcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCc-cEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 487 RIDPALVQKLADRH-NISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGV-SVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 487 ~i~~~~v~~~l~~~-gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~-~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
++.+.+.+.|.++ ||.++.|++|++. ..+. .|. +.||||+|+|||+|||++|+++|++
T Consensus 355 -~~~~~v~~~L~~~~gI~v~~g~~c~~~------------~~~~-------~g~~~~iRiS~~~ynt~~di~~l~~~l~~ 414 (424)
T PLN02855 355 -IHPTDLSTFLDQQHGVAIRSGHHCAQP------------LHRY-------LGVNASARASLYFYNTKEEVDAFIHALKD 414 (424)
T ss_pred -cCHHHHHHHhcccCCEEEechhhhhHH------------HHHH-------hCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence 5577788888766 9999999999631 1111 222 2899999999999999999999999
Q ss_pred hhhh
Q 037063 565 FLDA 568 (588)
Q Consensus 565 ~l~~ 568 (588)
.++.
T Consensus 415 ~~~~ 418 (424)
T PLN02855 415 TIAF 418 (424)
T ss_pred HHHH
Confidence 8755
No 6
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=9.4e-47 Score=404.11 Aligned_cols=386 Identities=17% Similarity=0.208 Sum_probs=305.1
Q ss_pred hHHHHHhhhccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccC
Q 037063 95 QADRIRAQDYFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYG 174 (588)
Q Consensus 95 ~~~~iR~~~f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g 174 (588)
.++++|. +||.++ ++.+||||+++|+.|+.+++++.+++. ...+||+.+ .+. .+
T Consensus 2 ~~~~~r~-~fp~l~-~~~iyld~a~~~~~p~~v~~a~~~~~~-~~~~~~~~~--------------------~~~---~~ 55 (398)
T TIGR03392 2 NPAQFRQ-QFPALQ-DGTVYLDSAATALKPQAVIDATQQFYR-LSSGTVHRS--------------------QHQ---QA 55 (398)
T ss_pred ChhHHHH-hCCccC-CCeEEeeCccccCCCHHHHHHHHHHHH-hcCCCCCCc--------------------ccH---HH
Confidence 4567886 699884 478999999999999999999876653 234555321 000 01
Q ss_pred CchhHHHHHHHHHHHHHhCCC-CCCceEEEecCHHHHHHHHHHhC---CCCCCCeEE-EcCCCchhHHHHHHHHHHhcCC
Q 037063 175 SEESELESKIRKRIMDFMNIS-EDDYTLVFTANQSSAFKLLAESY---PFYSNPRLL-TVYDHENEAAALMIESSKKRGA 249 (588)
Q Consensus 175 ~~~~~~~~~~r~~ia~~lga~-~~e~~vvft~g~T~al~lv~~s~---~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~ 249 (588)
....+.++++|+.+++++|++ ++ +|+||+|+|+++++++.++ .+++||+|+ +..+|+++...| ...++..|+
T Consensus 56 ~~~~~~~~~~r~~la~~~g~~~~~--~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~-~~~~~~~g~ 132 (398)
T TIGR03392 56 QSLTARYELARQQVARFLNAPDAE--NIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPW-LMVAQQTGA 132 (398)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCC--eEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHH-HHHHHHcCc
Confidence 123577899999999999995 44 4999999999999999998 368999965 567888765556 567788999
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCC
Q 037063 250 RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMD 328 (588)
Q Consensus 250 ~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~ 328 (588)
+++.++++ .++.+++++++++++ ++|++|++++++|+||.++|+++| ++|+++|+++++|++|.++ ..
T Consensus 133 ~v~~v~~~-~~~~~~~~~l~~~i~--------~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~--~~ 201 (398)
T TIGR03392 133 KVVKLPIG-ADLLPDIRQLPELLT--------PRTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVV--HG 201 (398)
T ss_pred EEEEEecC-CCCCcCHHHHHHHhc--------cCceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcC--CC
Confidence 99999997 567789999999998 789999999999999999999999 9999999999999999876 23
Q ss_pred CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccc-ccccccCCCCCc
Q 037063 329 TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLD-ESSQSKFPESSI 407 (588)
Q Consensus 329 ~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~-~~~f~e~GT~~~ 407 (588)
++++..+.+|++++|+||++| |.|+|+|+++++.++.+++...++ ........ ..+..+. ..+| |.||+++
T Consensus 202 ~~~~~~~~~d~~~~s~~K~~g--p~G~G~l~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~-e~GT~~~ 273 (398)
T TIGR03392 202 PPDVQALDIDFYAFSGHKLYG--PTGIGVLYGKTELLEAMPPWQGGG-KMLSHVSF----DGFIPQAVPHRF-EAGTPNI 273 (398)
T ss_pred CCChhhcCCCEEEEecccccC--CCceEEEEEcHHHHhhCCCeecCC-ceEeeccc----cccccCCChhhc-cCCCCCH
Confidence 455555669999999999998 889999999999888887755432 22211110 0111111 1277 8999999
Q ss_pred cchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCC
Q 037063 408 SGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTR 487 (588)
Q Consensus 408 ~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~ 487 (588)
.++ +++.+|++++.+.|++++.+|+..|++++++.|.++ ++++++++. .+++++|.+.+
T Consensus 274 ~~~---~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l---------~g~~~~~~~----~~~i~~~~~~~----- 332 (398)
T TIGR03392 274 AGV---IGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQL---------PGFRSFRCP----GSSLLAFDFAG----- 332 (398)
T ss_pred HHH---HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---------CCeEEeCCC----CCcEEEEEeCC-----
Confidence 987 788999999999999999999999999999999885 678887642 45799998765
Q ss_pred cCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCc-cEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 488 IDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGV-SVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 488 i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~-~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
++.+.+.+.|.++||.++.|+.|+. .+... .|. ++||||+|+|||.+||++++++|++++
T Consensus 333 ~~~~~l~~~L~~~gI~v~~g~~~~~------------~~~~~-------~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~ 393 (398)
T TIGR03392 333 VHHSDLAALLAESGIALRAGQHCAQ------------PLMAA-------LGVSGTLRASFAPYNTQQDVDALVDAVGAAL 393 (398)
T ss_pred cCHHHHHHHHHhCCEEEecCccchH------------HHHHH-------hCCCCEEEEEeeccCCHHHHHHHHHHHHHHH
Confidence 5577888888899999999999952 11111 121 389999999999999999999999877
Q ss_pred hh
Q 037063 567 DA 568 (588)
Q Consensus 567 ~~ 568 (588)
+.
T Consensus 394 ~~ 395 (398)
T TIGR03392 394 EL 395 (398)
T ss_pred HH
Confidence 64
No 7
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=2e-46 Score=401.92 Aligned_cols=386 Identities=17% Similarity=0.219 Sum_probs=306.4
Q ss_pred hHHHHHhhhccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccC
Q 037063 95 QADRIRAQDYFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYG 174 (588)
Q Consensus 95 ~~~~iR~~~f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g 174 (588)
+++++|+ +||.++ ++.+||||+++|+.|+.+++++.+++.. .++|+++. .+. .+
T Consensus 5 ~~~~~r~-~fp~l~-~~~~yld~a~~~~~~~~v~~a~~~~~~~-~~~~~~~~--------------------~~~---~~ 58 (401)
T PRK10874 5 NPAQFRA-QFPALQ-DAGVYLDSAATALKPQAVIEATQQFYSL-SAGNVHRS--------------------QFA---AA 58 (401)
T ss_pred CHHHHHH-hCCCcC-CceEEEeCCcccCCCHHHHHHHHHHHHh-ccCCCCCc--------------------ccH---HH
Confidence 5678886 699884 5799999999999999999998776643 44565321 000 01
Q ss_pred CchhHHHHHHHHHHHHHhCC-CCCCceEEEecCHHHHHHHHHHhC---CCCCCCeEE-EcCCCchhHHHHHHHHHHhcCC
Q 037063 175 SEESELESKIRKRIMDFMNI-SEDDYTLVFTANQSSAFKLLAESY---PFYSNPRLL-TVYDHENEAAALMIESSKKRGA 249 (588)
Q Consensus 175 ~~~~~~~~~~r~~ia~~lga-~~~e~~vvft~g~T~al~lv~~s~---~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~ 249 (588)
....+.++++|+.+++++|+ +++ +|+||+|+|+++++++.++ .+++||+|+ +..+|+++...| ...++..|+
T Consensus 59 ~~~~~~~~~~r~~la~~~g~~~~~--~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~-~~~~~~~g~ 135 (401)
T PRK10874 59 QRLTARYEAAREQVAQLLNAPDAK--NIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPW-LMVAQQTGA 135 (401)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCC--EEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHH-HHHHHHhCC
Confidence 22367899999999999999 444 4999999999999999998 468999955 678888866666 567788999
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCC
Q 037063 250 RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMD 328 (588)
Q Consensus 250 ~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~ 328 (588)
+++.++++ .++.+++++++++++ ++|++|++++++|+||.++|+++| ++|+++|+++++|++|.++ ..
T Consensus 136 ~v~~v~~~-~~~~~d~~~l~~~i~--------~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g--~~ 204 (401)
T PRK10874 136 KVVKLPLG-ADRLPDVDLLPELIT--------PRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAV--HF 204 (401)
T ss_pred EEEEEecC-CCCcCCHHHHHHhcC--------cCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccc--cc
Confidence 99999997 567899999999998 789999999999999999999999 9999999999999999876 23
Q ss_pred CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc-cccccccCCCCCc
Q 037063 329 TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL-DESSQSKFPESSI 407 (588)
Q Consensus 329 ~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~-~~~~f~e~GT~~~ 407 (588)
++++..+++|++++|+||+|| |.|+|+|+++++.++.+.+...++ ........ + .+... ...+| +.||+++
T Consensus 205 ~~~~~~~~~d~~~~s~~K~~g--p~G~G~l~~~~~~~~~~~~~~~~~-~~~~~~~~--~--~~~~~~~~~~~-e~Gt~~~ 276 (401)
T PRK10874 205 PADVQALDIDFYAFSGHKLYG--PTGIGVLYGKSELLEAMSPWQGGG-KMLTEVSF--D--GFTPQSAPWRF-EAGTPNV 276 (401)
T ss_pred cCCchhcCCCEEEEecccccC--CCccEEEEEchHHHhcCCCeecCC-cceEeecc--C--ccCCCCChhhc-cCCCcCH
Confidence 345555669999999999988 889999999999988887765442 22111110 0 11111 11277 8999999
Q ss_pred cchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCC
Q 037063 408 SGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTR 487 (588)
Q Consensus 408 ~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~ 487 (588)
.++ +++..|++++.++|++++.+|++.|++++++.|+++ ++++++.+. .+++++|++.+
T Consensus 277 ~~~---~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~---------~g~~~~~~~----~~~i~~~~~~~----- 335 (401)
T PRK10874 277 AGV---IGLSAALEWLADIDINQAESWSRSLATLAEDALAKL---------PGFRSFRCQ----DSSLLAFDFAG----- 335 (401)
T ss_pred HHH---HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---------CCEEEeCCC----CCcEEEEEECC-----
Confidence 886 788999999999999999999999999999999874 678887652 45799998765
Q ss_pred cCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCc-cEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 488 IDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGV-SVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 488 i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~-~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
++.+.+.+.|.++||.++.|..|.. ..+.. .|. ++||+|+|+|||.|||++++++|++++
T Consensus 336 ~~~~~~~~~L~~~gI~v~~g~~~~~-----------~~~~~--------~g~~~~iRiS~~~~nt~edid~ll~al~~~~ 396 (401)
T PRK10874 336 VHHSDLVTLLAEYGIALRAGQHCAQ-----------PLLAA--------LGVTGTLRASFAPYNTQSDVDALVNAVDRAL 396 (401)
T ss_pred cCHHHHHHHHHHCCcEEeccccchH-----------HHHHH--------hCCCCEEEEEecccCCHHHHHHHHHHHHHHH
Confidence 5577888888889999999998852 11111 221 389999999999999999999999887
Q ss_pred hh
Q 037063 567 DA 568 (588)
Q Consensus 567 ~~ 568 (588)
+.
T Consensus 397 ~~ 398 (401)
T PRK10874 397 EL 398 (401)
T ss_pred HH
Confidence 64
No 8
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=2.2e-47 Score=405.19 Aligned_cols=367 Identities=22% Similarity=0.272 Sum_probs=294.2
Q ss_pred eeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHh
Q 037063 113 VCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFM 192 (588)
Q Consensus 113 vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~l 192 (588)
||||++|+|++|+.|++++.+++. ..++||++.. +.. +....++++++|+.+++++
T Consensus 1 iYld~~~~~~~p~~v~~a~~~~~~-~~~~~~~~~~------------------~~~-----~~~~~~~~~~~r~~la~~l 56 (371)
T PF00266_consen 1 IYLDNAGTGPMPKSVLEAISDYLR-NFYANPHSGV------------------SHR-----SREFAEILEEAREALAKLL 56 (371)
T ss_dssp EEEBTSSS-B-BHHHHHHHHHHHH-HSGSSTSTSS------------------STT-----SHHHHHHHHHHHHHHHHHH
T ss_pred CEeeCCCccCCCHHHHHHHHHHHH-HhhhcCcccc------------------cch-----hhhhhHHHHHHHHHHHHhc
Confidence 799999999999999999977764 3466664310 001 1123788999999999999
Q ss_pred CCCCCCceEEEecCHHHHHHHHHHhC--CCCCCCeE-EEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHH
Q 037063 193 NISEDDYTLVFTANQSSAFKLLAESY--PFYSNPRL-LTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLM 269 (588)
Q Consensus 193 ga~~~e~~vvft~g~T~al~lv~~s~--~~~~gd~l-l~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~ 269 (588)
|++++ ++|+||+|+|+|+++++.++ ++++|++| ++..+|+++...| ...+++.|++|+.++.+ .++.+++++++
T Consensus 57 g~~~~-~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~-~~~~~~~g~~v~~i~~~-~~~~~~~~~~~ 133 (371)
T PF00266_consen 57 GAPPD-EEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPW-EEIAKRKGAEVRVIPAD-PGGSLDLEDLE 133 (371)
T ss_dssp TSSTT-EEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHH-HHHHHHTTEEEEEEEEG-TTSSCSHHHHH
T ss_pred CCccc-cccccccccchhhhhhhhcccccccccccccccccccccccccc-ccccccchhhhcccccc-ccchhhhhhhh
Confidence 99873 56999999999999999998 57899995 5889999876666 67778999999999998 67889999999
Q ss_pred HHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccC
Q 037063 270 KKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIF 348 (588)
Q Consensus 270 ~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~ 348 (588)
+.|+ +++++|+++|++|.||.++|+++| ++||++|+++++|++|+++ ..+++++.+++||+++|+||++
T Consensus 134 ~~l~--------~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g--~~~id~~~~~~D~~~~s~~Kl~ 203 (371)
T PF00266_consen 134 EALN--------PDTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAG--CVPIDLDELGADFLVFSSHKLG 203 (371)
T ss_dssp HHHH--------TTESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTT--TSS--TTTTTESEEEEESTSTT
T ss_pred hhhc--------cccceEEeecccccccEEeeeceehhhhhccCCceeEechhccc--cccccccccccceeeecccccC
Confidence 9998 899999999999999999999999 9999999999999999999 5678888888999999999966
Q ss_pred CCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCH
Q 037063 349 GENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGL 428 (588)
Q Consensus 349 G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~ 428 (588)
| |.|+|+||+++++++++++...++ +....... . ...+.. ...+| +.||+++..+ +++..+++++.+.|+
T Consensus 204 g--p~G~g~l~v~~~~~~~~~p~~~~~-~~~~~~~~-~-~~~~~~-~~~~~-~~GT~~~~~~---~~l~~al~~~~~~g~ 273 (371)
T PF00266_consen 204 G--PPGLGFLYVRPEAIERLRPAKPGG-GYLDFPSL-Q-EYGLAD-DARRF-EGGTPNVPAI---YALNEALKLLEEIGI 273 (371)
T ss_dssp S--SSTEEEEEEEHHHHHHHHTSSSSS-STTTHHHH-H-HHCHHS-TTTGS-SSSS--HHHH---HHHHHHHHHHHHHHH
T ss_pred C--CCchhhheehhhhhhccccccccc-cccccccc-h-hccccc-ccccc-cccceeeehh---hhHHHHHhhhhcccc
Confidence 6 999999999999999998887664 22111100 0 000011 11367 7999999987 789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEecccc
Q 037063 429 ILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGF 508 (588)
Q Consensus 429 ~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~ 508 (588)
+++.+|...|.+++.+.|.++ +.+++++|.....++++++|.+.+ ++...+.+.|.++||.++.|+
T Consensus 274 ~~i~~~~~~l~~~~~~~l~~~---------~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~L~~~~I~~~~G~ 339 (371)
T PF00266_consen 274 ERIRERIRELAEYLREALEEL---------PGIEVLGPDDEPRRPSIVSFNLPG-----SDADDVVKYLEERGIAVSTGS 339 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---------TTEEESSSSCGGBGTTEEEEEETT-----SSHHHHHHHHHHHTEEEEEST
T ss_pred ccchhhhhhHHHHHHhhhhcC---------CceeEeeecccccccceEEEeecC-----CCHHHHHHHHhhcCEEEeccC
Confidence 999999999999999999995 789999976666788999999976 668889998888899999999
Q ss_pred ccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHH
Q 037063 509 LQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRL 558 (588)
Q Consensus 509 ~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~l 558 (588)
.|+.. ....... . ++||||+|+|||+||||+|
T Consensus 340 ~~~~~---------~~~~~~~-------~--~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 340 ACAGP---------SLDILGM-------G--GVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp TTCHH---------HHHHHHT-------T--TEEEEE-GTTSSHHHHHHH
T ss_pred cccHH---------HHHHhCC-------C--CEEEEeccCCCCHHHHhhC
Confidence 99610 0111111 2 3999999999999999986
No 9
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=1.7e-44 Score=387.34 Aligned_cols=389 Identities=19% Similarity=0.263 Sum_probs=305.9
Q ss_pred HHHhhhccCCCC----CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCccccccccccccccccc
Q 037063 98 RIRAQDYFHLSL----NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQY 173 (588)
Q Consensus 98 ~iR~~~f~~l~~----~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 173 (588)
++|+ +||.++. ++.+|||++++|++|+.+++++.+++. ..++||++.+ +. .
T Consensus 2 ~~~~-~f~~~~~~~~~~~~~yld~~~~~~~p~~v~~a~~~~~~-~~~~~~~~~~--------------------~~---~ 56 (403)
T TIGR01979 2 NIRA-DFPILKRKINGKPLVYLDSAATSQKPQQVIDAVAEYYR-NSNANVHRGI--------------------HT---L 56 (403)
T ss_pred chhh-hCchhcCCCCCCceEEEeCccccCCCHHHHHHHHHHHH-hCCCCCCCCc--------------------cH---H
Confidence 4565 6998842 146999999999999999999876653 2455663210 00 0
Q ss_pred CCchhHHHHHHHHHHHHHhCCC-CCCceEEEecCHHHHHHHHHHhCC---CCCCCeEE-EcCCCchhHHHHHHHHHHhcC
Q 037063 174 GSEESELESKIRKRIMDFMNIS-EDDYTLVFTANQSSAFKLLAESYP---FYSNPRLL-TVYDHENEAAALMIESSKKRG 248 (588)
Q Consensus 174 g~~~~~~~~~~r~~ia~~lga~-~~e~~vvft~g~T~al~lv~~s~~---~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G 248 (588)
+....+.++++|+.|++++|++ ++ +|+||+|+|+++++++.++. +++|++|+ +..+|+++...| ...++..|
T Consensus 57 ~~~~~~~~~~~r~~ia~~~~~~~~~--~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~-~~~~~~~g 133 (403)
T TIGR01979 57 SVRATEAYEAVREKVAKFINAASDE--EIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPW-QLLAERTG 133 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCCC--eEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHH-HHHHHhcC
Confidence 1122567889999999999997 34 49999999999999998863 67899965 567888766555 56777889
Q ss_pred CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCC
Q 037063 249 ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDM 327 (588)
Q Consensus 249 ~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~ 327 (588)
++++.++++ +++.++.+++++.++ +++++|++++++|+||.++|+++| ++|+++|+++++|+++.++ .
T Consensus 134 ~~~~~v~~~-~~~~~~~~~l~~~i~--------~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g--~ 202 (403)
T TIGR01979 134 ATLKFIPLD-DDGTLDLDDLEKLLT--------EKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVP--H 202 (403)
T ss_pred cEEEEEecC-CCCCCCHHHHHHHhc--------cCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcC--c
Confidence 999999998 778899999999998 789999999999999999999999 9999999999999999887 3
Q ss_pred CCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCc
Q 037063 328 DTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSI 407 (588)
Q Consensus 328 ~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~ 407 (588)
.++++..+++|++++|+||++| |.|+|+++++++.++.+++...|+ ++...... +...+...+ .+| +.||+++
T Consensus 203 ~~~~~~~~~~d~~~~s~~K~~g--p~G~g~l~~~~~~~~~~~~~~~g~-~~~~~~~~--~~~~~~~~~-~~~-~~gt~~~ 275 (403)
T TIGR01979 203 MPVDVQALDCDFYVFSGHKMYG--PTGIGVLYGKEELLEQMPPFLGGG-EMIAEVSF--EETTYNEAP-HKF-EAGTPNI 275 (403)
T ss_pred cccCccccCCCEEEEecccccC--CCCceEEEEchHHHhcCCCeecCC-Cceeeccc--CccccCCCh-hhc-CCCCccH
Confidence 4556666679999999999998 889999999999888887766553 33222111 000111111 267 7899999
Q ss_pred cchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCC
Q 037063 408 SGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTR 487 (588)
Q Consensus 408 ~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~ 487 (588)
..+ +++..+++++.++|++++.+|+..|++++++.|.++ +++++++|.....++++++|.+.+
T Consensus 276 ~~~---~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~---------~g~~~~~~~~~~~~~~~v~~~~~~----- 338 (403)
T TIGR01979 276 AGV---IGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEI---------PGLRIYGPRDAEDRGGIISFNVEG----- 338 (403)
T ss_pred HHH---HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---------CCEEEeCCCCccccCceEEEEeCC-----
Confidence 886 788899999999999999999999999999999874 679999876544678999999865
Q ss_pred cCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCC-ccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 488 IDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSG-VSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 488 i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g-~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
++...+.+.|+++||.++.|++|+.. .+.. .| .+.||+|+|+|||.+||++++++|++++
T Consensus 339 ~~~~~~~~~L~~~gI~v~~g~~~~~~-----------~~~~--------~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~ 399 (403)
T TIGR01979 339 VHPHDVGTILDEEGIAVRSGHHCAQP-----------LMRR--------FGVPATCRASFYIYNTEEDIDALVEALKKVR 399 (403)
T ss_pred cCHHHHHHHHhhCCEEEcchhhhhHH-----------HHHH--------hCCCCEEEEEeccCCCHHHHHHHHHHHHHHH
Confidence 45677888999999999999888521 1111 12 1289999999999999999999999866
Q ss_pred hh
Q 037063 567 DA 568 (588)
Q Consensus 567 ~~ 568 (588)
+.
T Consensus 400 ~~ 401 (403)
T TIGR01979 400 KF 401 (403)
T ss_pred HH
Confidence 53
No 10
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=7.5e-44 Score=377.14 Aligned_cols=358 Identities=15% Similarity=0.111 Sum_probs=280.9
Q ss_pred eeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHh
Q 037063 113 VCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFM 192 (588)
Q Consensus 113 vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~l 192 (588)
+||||++.+++|+.+++++.+++. ..++||++. .+. ++....++++++|+.+++++
T Consensus 1 iYld~a~~~~~~~~v~~a~~~~~~-~~~~~~~~~--------------------~~~---~~~~~~~~~~~~r~~la~~~ 56 (364)
T PLN02651 1 LYLDMQATTPIDPRVLDAMLPFLI-EHFGNPHSR--------------------THL---YGWESEDAVEKARAQVAALI 56 (364)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHH-hCCCCCChh--------------------hhH---HHHHHHHHHHHHHHHHHHHh
Confidence 699999999999999999876663 235666321 010 01123678899999999999
Q ss_pred CCCCCCceEEEecCHHHHHHHHHHhC---CCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHH
Q 037063 193 NISEDDYTLVFTANQSSAFKLLAESY---PFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKL 268 (588)
Q Consensus 193 ga~~~e~~vvft~g~T~al~lv~~s~---~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l 268 (588)
|+++++ |+||+|+|+++++++.++ .+++|++|+ +..+|++....| ..+ +..|++++.++++ +++.++++++
T Consensus 57 g~~~~~--v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~-~~~-~~~g~~v~~v~~~-~~~~~d~~~l 131 (364)
T PLN02651 57 GADPKE--IIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSC-RHL-QQEGFEVTYLPVK-SDGLVDLDEL 131 (364)
T ss_pred CCCCCe--EEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHH-HHH-HhcCCEEEEEccC-CCCcCCHHHH
Confidence 998665 999999999988877654 147789865 567888744444 333 4679999999997 6788999999
Q ss_pred HHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCcc
Q 037063 269 MKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKI 347 (588)
Q Consensus 269 ~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~ 347 (588)
+++|+ +++++|++++++|+||.++|+++| ++||++|++++||++|.++ ..+++++.+++||+++|+|||
T Consensus 132 ~~~i~--------~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g--~~~~~~~~~~~D~~~~s~hK~ 201 (364)
T PLN02651 132 AAAIR--------PDTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVG--KIPVDVDDLGVDLMSISGHKI 201 (364)
T ss_pred HHhcC--------CCcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhC--CcccCcccCCCCEEEechhhh
Confidence 99998 789999999999999999999999 9999999999999999998 456666777799999999998
Q ss_pred CCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhC
Q 037063 348 FGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALG 427 (588)
Q Consensus 348 ~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G 427 (588)
+| |.|+|+||++++....+.+...|+ ++. .+| +.||+|+.++ .++.++|+++.+.
T Consensus 202 ~g--p~G~g~l~v~~~~~~~l~p~~~g~-~~~-----------------~~~-~~GT~~~~~~---~~l~~al~~~~~~- 256 (364)
T PLN02651 202 YG--PKGVGALYVRRRPRVRLEPLMSGG-GQE-----------------RGR-RSGTENTPLV---VGLGAACELAMKE- 256 (364)
T ss_pred CC--CCceEEEEEcCCCCCCCCccccCC-Ccc-----------------CCc-cCCCccHHHH---HHHHHHHHHHHHh-
Confidence 66 999999999999888888877653 220 145 7899999997 8999999999874
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCC-cccEEEEEeecCCCCCcCHHHHHHHHHhCCcEecc
Q 037063 428 LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFD-RGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSC 506 (588)
Q Consensus 428 ~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~-rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~ 506 (588)
.+++.+|.+.|.+++++.|+++ .+++++++|..... +.++++|++.+ ++++.+.+.|.+ |.++.
T Consensus 257 ~~~i~~~~~~l~~~l~~~l~~~--------~~~~~i~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~L~~--i~v~~ 321 (364)
T PLN02651 257 MDYDEKHMKALRERLLNGLRAK--------LGGVRVNGPRDPEKRYPGTLNLSFAY-----VEGESLLMGLKE--VAVSS 321 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh--------CCCEEEECCCCcccCcCCEEEEEeCC-----CCHHHHHHHhCC--EEEEc
Confidence 6999999999999999999863 46899999854333 46799999976 667888887764 99999
Q ss_pred ccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHH
Q 037063 507 GFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTY 556 (588)
Q Consensus 507 G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~ 556 (588)
|++|+++...... .+..- +. ......+.||+|+|+|||+||||
T Consensus 322 g~~c~~~~~~~~~-----~~~~~-g~-~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 322 GSACTSASLEPSY-----VLRAL-GV-PEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred hhhcCCCCCCcCH-----HHHHc-CC-ChHHhCceEEEEcCCCCCHHHcC
Confidence 9999876433211 11110 00 00001239999999999999985
No 11
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=5.4e-43 Score=372.63 Aligned_cols=368 Identities=17% Similarity=0.173 Sum_probs=286.9
Q ss_pred eeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHh
Q 037063 113 VCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFM 192 (588)
Q Consensus 113 vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~l 192 (588)
+||||++++++|+.+++++.+++.. .++||++. +. .+.+..+.++++|+.+++++
T Consensus 1 ~yld~aa~~~~~~~v~~a~~~~~~~-~~~~~~~~---------------------~~---~~~~~~~~~~~~r~~la~~~ 55 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLPYFTE-YFGNPSSM---------------------HS---FGGEVGKAVEEAREQVAKLL 55 (379)
T ss_pred CcCCCcCCCCCCHHHHHHHHHHHHh-cCCCCCcc---------------------cH---HHHHHHHHHHHHHHHHHHHh
Confidence 6999999999999999998777653 46776321 10 01123677899999999999
Q ss_pred CCCCCCceEEEecCHHHHHHHHHHhCC--CCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHH
Q 037063 193 NISEDDYTLVFTANQSSAFKLLAESYP--FYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLM 269 (588)
Q Consensus 193 ga~~~e~~vvft~g~T~al~lv~~s~~--~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~ 269 (588)
|+++++ |+||+|+|+++++++.++. +.++++|+ +..+|+++...| ..+++.|++++.++.+ +++.+++++++
T Consensus 56 g~~~~~--i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~--~~~~~~G~~v~~v~~~-~~g~~~~~~l~ 130 (379)
T TIGR03402 56 GAEPDE--IIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLC--QHLEKQGYKVTYLPVD-EEGRLDLEELR 130 (379)
T ss_pred CCCCCe--EEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHH--HHHHHcCCEEEEEccC-CCCcCCHHHHH
Confidence 998654 9999999999999888751 24567765 577888744433 3445689999999987 66789999999
Q ss_pred HHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccC
Q 037063 270 KKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIF 348 (588)
Q Consensus 270 ~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~ 348 (588)
+.++ +++++|++++++|+||.++|+++| ++|+++|+++++|++|.++ ..++++..+++|++++|+||++
T Consensus 131 ~~i~--------~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g--~~~~~~~~~~~D~~~~s~~K~~ 200 (379)
T TIGR03402 131 AAIT--------DDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVG--KIPIDLKEMNIDMLSLSGHKLH 200 (379)
T ss_pred HhcC--------CCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECccccc--ccccCcccCCCCEEEEcHHHcC
Confidence 9997 689999999999999999999999 9999999999999999987 4566666677999999999987
Q ss_pred CCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCH
Q 037063 349 GENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGL 428 (588)
Q Consensus 349 G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~ 428 (588)
| |.|+|++|++++. .+.|...|+ +. . ..+ +.||+++.++ .++.++++++.+ .+
T Consensus 201 g--p~G~g~l~v~~~~--~~~p~~~g~-~~--------------~---~~~-~~gt~~~~~~---~~l~~al~~~~~-~~ 253 (379)
T TIGR03402 201 G--PKGVGALYIRKGT--RFRPLLRGG-HQ--------------E---RGR-RAGTENVPGI---VGLGKAAELATE-HL 253 (379)
T ss_pred C--CCceEEEEECCCC--CCCCcccCC-cc--------------C---CCc-CCCCccHHHH---HHHHHHHHHHHH-hH
Confidence 7 9999999999875 355555442 11 0 034 6899999987 788999999877 47
Q ss_pred HHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEecccc
Q 037063 429 ILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGF 508 (588)
Q Consensus 429 ~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~ 508 (588)
+.+.+|.+.|+++++++|.+. +++++++++.. ...+++++|.+.. ++++.+...|+++||.++.|+
T Consensus 254 ~~~~~~~~~l~~~l~~~l~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~l~~~gI~v~~g~ 319 (379)
T TIGR03402 254 EEENTRVRALRDRLEAGLLAR--------IPDARLNGDPT-KRLPNTVNISFEY-----IEGEAILLLLDMEGICASSGS 319 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHhh--------CCCEEEeCCCc-cCCCCEEEEEecC-----CCHHHHHHhhccCCEEEEchh
Confidence 999999999999999999851 36788888643 1224689898876 567888888899999999999
Q ss_pred ccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 509 LQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 509 ~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+|+++....+. +....+. ......+.||+|+|+|||.|||+++++.|++.++.
T Consensus 320 ~c~~~~~~~~~------~~~~lg~-~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~ 372 (379)
T TIGR03402 320 ACTSGSLEPSH------VLRAMGV-PHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIAR 372 (379)
T ss_pred hcCCCCCCcCH------HHHHcCC-ChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 99887544321 1111000 00011138999999999999999999999998765
No 12
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=8.5e-44 Score=364.65 Aligned_cols=377 Identities=16% Similarity=0.167 Sum_probs=289.4
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
.+.+|||++++|+++..|++++..++ ...++||||. .||.+..+.++++|+.||
T Consensus 42 ~~~vyld~~at~p~~~~Vldam~~~~-~~~~~nPh~~-------------------------~y~w~~~~~~E~aR~~VA 95 (428)
T KOG1549|consen 42 TRPVYLDNQATGPMDPRVLDAMLPYL-LEYLGNPHSR-------------------------SYGWKAEDAVEAAREQVA 95 (428)
T ss_pred CccEEEecCcCCCCCHHHHHHHHHHH-HHhhcCCCcc-------------------------ccchhhhHHHHHHHHHHH
Confidence 58899999999999999999996555 4678998741 234444667899999999
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC----eEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccC
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP----RLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIH 264 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd----~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~ 264 (588)
+++|+++.+ |+||+|+|+++|+++.+++|..++ +|+ +..+|++ ...+ .+..+..|++|+++|++ .++.++
T Consensus 96 klInAd~~d--IiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~-v~~s-~~~l~~~g~~Vt~lpv~-~~~~~d 170 (428)
T KOG1549|consen 96 KLINADPSD--IVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPC-VLDS-CRALQEEGLEVTYLPVE-DSGLVD 170 (428)
T ss_pred HHhCCCCCc--EEEeCCchHHHHHHHHHhhccccccccceEEEecccCcc-hhHH-HHHHHhcCeEEEEeccC-cccccc
Confidence 999999886 999999999999999999988777 666 5666665 6666 35668889999999999 889999
Q ss_pred HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEec
Q 037063 265 SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICS 343 (588)
Q Consensus 265 ~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S 343 (588)
.+++++.|+ ++|+||.+.+++|.+|+++|+++| ++|++.|++|++||||.+| ..++|+.+.++||+++|
T Consensus 171 ~~~~~~~i~--------~~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG--~i~vDV~eln~D~~s~s 240 (428)
T KOG1549|consen 171 ISKLREAIR--------SKTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVG--KIPVDVQELNADFLSIS 240 (428)
T ss_pred HHHHHHhcC--------CCceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcC--CccccHHHcCchheeee
Confidence 999999999 899999999999999999999999 9999999999999999998 35555556669999999
Q ss_pred cCccCCCCCCceEEEEEeCcc-hhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHH
Q 037063 344 FYKIFGENPSGFGCLFVKKSS-ASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDH 422 (588)
Q Consensus 344 ~~K~~G~~P~G~G~L~v~~~~-~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~ 422 (588)
+||||| |+|+|+||+|+.. .-++.|.+.|| |... -| +.||.+.+.. .++..|.++
T Consensus 241 ~HK~yg--p~~iGaLYvr~~~~~~~~~p~~~GG-gq~r-----------------~~-rsGT~~~~~~---~~~gsA~e~ 296 (428)
T KOG1549|consen 241 AHKIYG--PPGIGALYVRRKRPRLRVEPPLSGG-GQER-----------------GL-RSGTVATPLA---VGLGSAAEF 296 (428)
T ss_pred cccccC--CCcceEEEEccCCCcccccCcccCC-cccc-----------------cc-ccCCcCchhh---hhhHHHHHH
Confidence 999999 7789999999822 12344666664 4421 34 8999998886 788899999
Q ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCc
Q 037063 423 ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNI 502 (588)
Q Consensus 423 l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI 502 (588)
+.+. +..+..++..+...+..++..- .+.+.++|+.. ....+.++|++.-..|+ .-+++...|
T Consensus 297 ~~~~-~~~~~~~~~~~~~~ll~~i~~~--------~~~~~~~G~~~-~~~~~~~~~~~~~~~g~-------~~~~~~~~~ 359 (428)
T KOG1549|consen 297 VNKE-MAYDEAIIKRLSEKLLMGIGQS--------LPEVTLNGSGK-SRYPGLVSLSFPYVEGE-------SLLMDLKDV 359 (428)
T ss_pred HHhh-cchhHHHHHHHHHHHHHHHhhh--------CchhhccCCcc-cccccceeeecccccCc-------chhhhhhhh
Confidence 8775 4556666666777777777552 35666777644 23567888888743332 123344567
Q ss_pred EeccccccCccc-ccchHHHHHHHHhhhcCCC-CCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhhhccccccc
Q 037063 503 SLSCGFLQNIFF-SGEYEQERVRVLETRSGTN-ETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDADFVEKERWR 577 (588)
Q Consensus 503 ~v~~G~~c~~~~-~~~~~~~~~~~l~~~~~~~-~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~~~~~~~~~ 577 (588)
.++.|..|.... ..+|. +... | +.......||+|+|.||+.+|++++++.+++.+...+--..+|.
T Consensus 360 ~l~s~~a~~~~~~epsy~------l~~~---G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~~s~l~~ 427 (428)
T KOG1549|consen 360 ALSSGSACTSASLEPSYV------LRAI---GVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLREMSPLWE 427 (428)
T ss_pred hhcccchhhcCCCCcchh------hhhc---CcchhhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhccccCCCCC
Confidence 788888885432 11211 1110 1 11122348999999999999999999999998877665545553
No 13
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=5.9e-42 Score=365.07 Aligned_cols=367 Identities=15% Similarity=0.151 Sum_probs=283.8
Q ss_pred eeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHh
Q 037063 113 VCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFM 192 (588)
Q Consensus 113 vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~l 192 (588)
+||||+++++.++.+++++.+++. ..++||++. ..|+......++++|+.+++.+
T Consensus 1 ~yld~aa~~~~~~~v~~~~~~~~~-~~~~n~~~~------------------------~~~~~~~~~~l~~a~~~~~~~~ 55 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDPFFC-DIYGNPNSL------------------------HQFGTATHPAIAEALDKLYKGI 55 (382)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHH-hcCcCCccc------------------------cHHHHHHHHHHHHHHHHHHHHc
Confidence 699999999999999999876664 356777431 1122234667889999999999
Q ss_pred CC-CCCCceEEEecCHHHHHHHHHHhCCC----CCC-CeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCH
Q 037063 193 NI-SEDDYTLVFTANQSSAFKLLAESYPF----YSN-PRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHS 265 (588)
Q Consensus 193 ga-~~~e~~vvft~g~T~al~lv~~s~~~----~~g-d~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~ 265 (588)
|+ +++ +|+||+|+|+++++++.++.+ +++ ++|+ +..+|++....+ ..++..|++++.++++ +++.++.
T Consensus 56 ~~~~~~--~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~--~~~~~~G~~v~~v~~~-~~g~~d~ 130 (382)
T TIGR03403 56 NARDLD--DIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATC--AFLESLGVEVTYLPIN-EQGTITA 130 (382)
T ss_pred CcCCCC--eEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHH--HHHHHCCCEEEEEecC-CCCCCCH
Confidence 98 444 499999999999999998632 454 5655 567888744433 4557789999999998 6788999
Q ss_pred HHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEecc
Q 037063 266 GKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSF 344 (588)
Q Consensus 266 e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~ 344 (588)
++|+++++ +++++|++++++|+||.++|+++| ++|+++|+++++|+++.++ ..++++..+++|++++|+
T Consensus 131 ~~l~~~i~--------~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g--~~~~~~~~~~~D~~~~s~ 200 (382)
T TIGR03403 131 EQVREAIT--------EKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIG--KIPVDVQKAGVDFLSFSA 200 (382)
T ss_pred HHHHHhcc--------cCCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcC--CCccCccccCCCEEEEcc
Confidence 99999997 678999999999999999999999 9999999999999998887 344566666799999999
Q ss_pred CccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHH
Q 037063 345 YKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHAD 424 (588)
Q Consensus 345 ~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~ 424 (588)
||++| |.|+|+|++|++. .+.+...|+ +.. ..+ +.||+++.++ +++..+++++.
T Consensus 201 ~K~~g--p~G~g~l~vr~~~--~~~p~~~g~-~~~-----------------~~~-~~gt~~~~~~---~al~~al~~~~ 254 (382)
T TIGR03403 201 HKFHG--PKGVGGLYIRKGV--ELTPLFHGG-EHM-----------------GGR-RSGTLNVPYI---VAMGEAMRLAN 254 (382)
T ss_pred hhhCC--CCceEEEEECCCC--CCCCcccCC-CCC-----------------CCc-ccCCcChHHH---HHHHHHHHHHH
Confidence 99988 8999999999875 355544432 110 023 6899999886 78889999887
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEe
Q 037063 425 ALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISL 504 (588)
Q Consensus 425 ~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v 504 (588)
+. ++.+.+|++.++++++++|+++ ++++++++.. ...+++++|++.+ ++++.+.+.|+++||.+
T Consensus 255 ~~-~~~~~~~~~~l~~~l~~~L~~~---------~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~L~~~gI~v 318 (382)
T TIGR03403 255 EY-LDFEKSHVRRLRDRLEDALLEL---------PDVFVVGDRE-HRVPNTILISIKG-----VEGEAMLWDLNKAGIAA 318 (382)
T ss_pred Hh-HHHHHHHHHHHHHHHHHHHhcC---------CCEEEECCCC-CCcCCEEEEEeCC-----CCHHHHHHhhccCCEEE
Confidence 74 8899999999999999999884 6899998743 1224688898865 56777877788999999
Q ss_pred ccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 505 SCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 505 ~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+.|++|+........ +....+ .+.....+.||+|+|++||+|||++++++|++.+++
T Consensus 319 ~~g~~c~~~~~~~~~------v~~~~g-~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~ 375 (382)
T TIGR03403 319 STGSACASEDLEANP------VMVAIG-ADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQR 375 (382)
T ss_pred EchhccCCCCCCcCH------HHHHcC-CChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999765433211 111100 000011138999999999999999999999987654
No 14
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=100.00 E-value=6.5e-44 Score=373.53 Aligned_cols=533 Identities=42% Similarity=0.650 Sum_probs=410.6
Q ss_pred cccccccCC----CcCCCCCCCCCCCCCCCCCccCCCCccchH-HHhhhhHhhhccccCCCCCCCCCCCCcchHHHHHHH
Q 037063 9 ALSEACCRG----CCPNPFHGLPLDHHHHPHELEAPKSPRTAA-AARHEFKVTTTSSLFPNAHFTNHESLPSLQESFANF 83 (588)
Q Consensus 9 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~f 83 (588)
+.++.|++| |+...+-+ |++++ -+++.++. .++++ +++++ +|+.+.|+.+++||.+.+++..|
T Consensus 31 l~sesq~~g~~~~sq~~e~~n-phs~~--------~ts~~l~~~v~Q~r-~ril~--~f~tta~dy~v~lp~~t~al~~v 98 (728)
T KOG2142|consen 31 LFSESQLEGVAFQSQSSENAN-PHSHL--------GTSRSLARLVAQVR-LRILA--LFNTTAFDYEVSLPALTEALKLV 98 (728)
T ss_pred hhhhcccchhhhhhhccccCC-Ccccc--------cchHHHHHHHHHHH-HHHHH--HhccccccccchhHHHHHHHHHH
Confidence 348889999 77775433 33222 11122211 12333 66666 99999999999999999999999
Q ss_pred HHhCCCCCCchhHHHHHhhhccCCCCC-CeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccc
Q 037063 84 TKVFPQYLQTDQADRIRAQDYFHLSLN-NYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICY 162 (588)
Q Consensus 84 ~~~~p~y~~~~~~~~iR~~~f~~l~~~-~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~ 162 (588)
+++||.|.+++.+|++|..+|.|+... -.+++||++.|+++..+... ||+.--|++++
T Consensus 99 ae~fp~~s~tekid~lrs~~y~hls~s~~~~~~~~~~~gl~sy~q~~~---------------------i~~~~~~sls~ 157 (728)
T KOG2142|consen 99 AEAFPFYSQTEKIDNLRSDEYGHLSSSGHLMRLDYSGIGLFSYSQTNE---------------------ISDSEEFSLSE 157 (728)
T ss_pred HHhCccccccccccchhhhhhcccccccceeeeeeeccceEEeeeeee---------------------ccccccccccc
Confidence 999999999999999999999999533 35899999999999844333 24444477777
Q ss_pred cccccccccccCCch-hHHHHH-HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHH
Q 037063 163 RSVNLNSWLQYGSEE-SELESK-IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALM 240 (588)
Q Consensus 163 ~~~~~~s~~~~g~~~-~~~~~~-~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~ 240 (588)
+.+++..+.++++.+ ...... ++.+++.+++++.++|.+++|.+...++.+.++++|++-...+++.++|++.++.||
T Consensus 158 ~~~~ls~~~L~~g~a~~nfeg~kik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~f~~~~~lltiFgyetgAvlv~ 237 (728)
T KOG2142|consen 158 SEANLSEHSLFGGAAQSNFEGDKIKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYPFDFNPKLLTIFGYETGAVLVM 237 (728)
T ss_pred cccCcccchhcccchhcccccceeeeeeecccccCCceEEEEEeecccccccchHhhCCCcccchheeecCCCchhhHHH
Confidence 888887777776653 444444 899999999999999999999999999999999999887777888999999999999
Q ss_pred HHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHHHcCcEEEEeCC
Q 037063 241 IESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAAEKGWHVLLDAT 320 (588)
Q Consensus 241 ~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~~g~~vvvDaa 320 (588)
.+.|+.+|+++....+.|+...+..+++++.+...+++.++....+++|+.++..||.++++.|+.++++++|++++|+.
T Consensus 238 ~r~A~~~Ggkt~sa~f~wp~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda~ 317 (728)
T KOG2142|consen 238 NRSAELKGGKTASAEFSWPMLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLALANNWHVLLDAL 317 (728)
T ss_pred hhhhHhhcCccceeecccchHHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHHHHHHhhhHHHHHhhh
Confidence 99999999999999999999999999999999865555566678999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCCCCCCCCcEEEeccCccCCCC-CCceEEEEEeCcchhcccCCC--CCCCceEeeecCCC-----------
Q 037063 321 ALGSKDMDTLGLSLFKPDFLICSFYKIFGEN-PSGFGCLFVKKSSASVLSGST--SSVSTIMGIEPSFS----------- 386 (588)
Q Consensus 321 ~~~~~d~~~l~l~~~~~D~vv~S~~K~~G~~-P~G~G~L~v~~~~~~~l~~~~--~g~~g~v~~~~~~~----------- 386 (588)
+++|++|+.++++.++|||.++++++.||.+ |.|+||+.|+|..+..|.-.. +-+.|.+...+.-.
T Consensus 318 ~lG~kdmd~yglS~f~Pdfqg~sf~fv~g~d~psgfGcl~VkKs~i~~l~lrtGcfcn~Gack~~pgl~~~~~~~~~~~g 397 (728)
T KOG2142|consen 318 ALGPKDMDSYGLSLFQPDFQGPSFYFVFGRDDPSGFGCLEVKKSAISGLELRTGCFCNIGACKIYPGLYLEMSQKGLSAG 397 (728)
T ss_pred ccCcchHhhhhhhccCccceeeeEEEEeccCCCCceeeeeeehhhhhceeccCCCCCCCcceeecccccHHHHHHHhhhc
Confidence 9999999999999999999999999999977 899999999998876553221 11134444433000
Q ss_pred --------------------------------------------------cc---ccccc-----c---------cc--c
Q 037063 387 --------------------------------------------------EI---IELET-----L---------DE--S 397 (588)
Q Consensus 387 --------------------------------------------------~~---~~~~~-----~---------~~--~ 397 (588)
++ +++.. + +. .
T Consensus 398 ~~cgD~dg~~~s~~~~~~~~~~a~~~~~v~~~~~T~~lm~~~~~se~e~~~n~~a~Pl~~~~~~~R~~d~~~~s~~~~~~ 477 (728)
T KOG2142|consen 398 KGCGDNDGQPVSGYMQTPADVGAYLSAQVSDVLETDPLMKSPVFSEQEDSDNGIATPLLERVQLKRHFDAAVASYPIKCA 477 (728)
T ss_pred cccccCCCCcccccccchhhhhHHHHHhhhhhhhccccccccccchhhhccccccCCcchhhcccchhhhhhhhhhhhhc
Confidence 00 00000 0 00 0
Q ss_pred ccc--cCC-----------------------------------------------CCCccchhhHHHHH-----------
Q 037063 398 SQS--KFP-----------------------------------------------ESSISGVSSKLVEC----------- 417 (588)
Q Consensus 398 ~f~--e~G-----------------------------------------------T~~~~~~~~~~al~----------- 417 (588)
.|| +.+ +.++. .++.
T Consensus 478 ~~EI~~~~~~~~gl~~~~s~m~~~~~~~alr~etE~e~~Li~~~~~~~~d~~~~~~vs~~-----~sl~~~~a~~~s~~d 552 (728)
T KOG2142|consen 478 AFEIEEENSGSQGLKYDRSWMSVDMNGSALRQETESELCLIGPRIKVQEDEQSERRVSFP-----TSLEQGEASKCSSYD 552 (728)
T ss_pred eeEeeccCccccccccccccccccccccceeeecccceeeeccccchhhhcccceeecch-----hhhhhhhhhhccccc
Confidence 110 000 00000 1222
Q ss_pred ----HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCC-CCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHH
Q 037063 418 ----KGLDHADALGLILISNRARYLINWLANALMNLHHPHSET-GIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 418 ----~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~-g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~ 492 (588)
.+||+.+.+|+.....|.+.|.+||+..|..+.|+...+ -..++++|+|+....||+-++|++.+..+..+.+..
T Consensus 553 ~~~c~~iDh~~~lgln~t~~r~r~ll~wl~~sl~~~~~~~~~~~~~nlvq~ygpk~~~erG~~~~fnl~d~~~~fr~p~I 632 (728)
T KOG2142|consen 553 CPPCRGIDHVDSLGLNLTTNRGRELLNWLVQSLRNLQHSESSSTTVNLVQIYGPKTKYERGPAVAFNLFDLSKRFRAPII 632 (728)
T ss_pred CccccccchhhhhhHHhhhhhhhhHHHHHHHhcccccccccccccccceeeecCccccccChhheeehhhhhccccchhh
Confidence 378889999999999999999999999998777654321 246899999999999999999999999999999999
Q ss_pred HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhhhcc
Q 037063 493 VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDADFVE 572 (588)
Q Consensus 493 v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~~~~ 572 (588)
|.++.+..+|.++.++..++.+.+.-...+.+.+.++...........+|++++|+.+++||++++|.++.+||+..|++
T Consensus 633 V~~lae~E~isl~~~~l~~iri~dp~~r~~dq~~~~r~~~~~~~~Rl~vvt~~lgfltnfedv~K~w~fv~~fl~pgf~~ 712 (728)
T KOG2142|consen 633 VNKLAEREEISLGELSLGHIRIQDPCHRDIDQLLGQRRGRTNGESRLSVVTARLGFLTNFEDVYKLWEFVARFLDPGFVE 712 (728)
T ss_pred hcchhhhhcccccceeeeeeEEecCcchhhhHHhhhhccccccceeEeeeeeehhhhhchHHHHHHHHHHHHhcChhhhh
Confidence 99999999999988877766554411112233333331110111223489999999999999999999999999999999
Q ss_pred ccccccc
Q 037063 573 KERWRYM 579 (588)
Q Consensus 573 ~~~~~~~ 579 (588)
++.||-.
T Consensus 713 ~~~~~~~ 719 (728)
T KOG2142|consen 713 KVELRTV 719 (728)
T ss_pred hccccch
Confidence 9999976
No 15
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=4.3e-41 Score=360.68 Aligned_cols=371 Identities=15% Similarity=0.140 Sum_probs=280.8
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
+..+||||+++++.|+.+++++.+++... ++||++.. +.. +....+.++++|+.++
T Consensus 2 ~~~~yld~aa~~~~~~~v~~a~~~~~~~~-~~~~~~~~--------------------~~~---~~~~~~~~~~~r~~la 57 (402)
T TIGR02006 2 KLPIYLDYAATTPVDPRVAEKMMPYLTEK-FGNPASRS--------------------HSF---GWEAEEAVENARNQVA 57 (402)
T ss_pred CccEEeeCCcCCCCCHHHHHHHHHHHHhc-CCCCChhh--------------------hHH---HHHHHHHHHHHHHHHH
Confidence 45799999999999999999987766432 56663210 100 1112567899999999
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCC---CCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCH
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYP---FYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHS 265 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~---~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~ 265 (588)
+++|+++++ |+||+|+|+++++++.++. .++|++|+ +..+|++....| ..++..|++++.++.+ +++.+++
T Consensus 58 ~~~g~~~~~--v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~--~~~~~~g~~v~~v~~~-~~~~~d~ 132 (402)
T TIGR02006 58 ELIGADSRE--IVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTC--RYLEREGFEVTYLPPK-SNGLIDL 132 (402)
T ss_pred HHhCCCCCe--EEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHH--HHHHhcCCEEEEEccC-CCCcCCH
Confidence 999998765 9999999999999887752 36888865 566777644333 3445679999999988 6788999
Q ss_pred HHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEecc
Q 037063 266 GKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSF 344 (588)
Q Consensus 266 e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~ 344 (588)
++|+++++ +++++|++++++|+||.+.|+++| ++|+++|+++++|++|+++ ..++++..+.+|++++|+
T Consensus 133 ~~l~~~l~--------~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g--~~~~~~~~~~~D~~~~s~ 202 (402)
T TIGR02006 133 EELKAAIR--------DDTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVG--KIPINVNELKVDLMSISG 202 (402)
T ss_pred HHHHHhcC--------CCCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcC--CcccCccccCCCEEEEeh
Confidence 99999987 679999999999999999999999 9999999999999999988 345566667799999999
Q ss_pred CccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHH
Q 037063 345 YKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHAD 424 (588)
Q Consensus 345 ~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~ 424 (588)
||++| |.|+|+++++++....+.+...++ +. .++| +.||+++.++ +++..+|++++
T Consensus 203 ~K~~g--p~G~G~l~~~~~~~~~~~~~~~g~-~~-----------------~~~~-~~gt~~~~~~---~al~~al~~~~ 258 (402)
T TIGR02006 203 HKIYG--PKGIGALYVRRKPRVRLEALIHGG-GH-----------------ERGM-RSGTLPTHQI---VGMGEAFRIAK 258 (402)
T ss_pred hhhcC--CCceEEEEEccCCCCCCCceecCC-Cc-----------------cCCc-cCCCccHHHH---HHHHHHHHHHH
Confidence 99888 899999999988766666655442 21 0145 7899999886 78889999887
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc-cEEEEEeecCCCCCcCHHHHHHHHHhCCcE
Q 037063 425 ALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG-PSLAFNVFDWNGTRIDPALVQKLADRHNIS 503 (588)
Q Consensus 425 ~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg-~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~ 503 (588)
. +++.+.+|.+.|+++++++|+++ ++++++++.. .+. +++.|.+.. ++.+.+...+ ++|.
T Consensus 259 ~-~~~~~~~~~~~l~~~l~~~l~~~---------~~v~~~~~~~--~~~p~~~~v~f~~-----~~~~~~~~~l--~~i~ 319 (402)
T TIGR02006 259 E-EMAQDTAHVLALRDRLLNGIKSI---------EEVYLNGDLE--HRVPGNLNVSFNY-----VEGESLIMAL--KDLA 319 (402)
T ss_pred H-hHHHHHHHHHHHHHHHHHHHhcC---------CCEEEeCCcc--ccCCCeEEEEEeC-----cCHHHHHHhc--CCEE
Confidence 6 68999999999999999999885 6788887642 233 333333333 2345554444 5999
Q ss_pred eccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 504 LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 504 v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
+++|++|+++....+. .+... +. ......+.||+|+|+|||.|||++++++|+++++..
T Consensus 320 v~~G~~c~~~~~~~~~-----~l~~l-g~-~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~ 378 (402)
T TIGR02006 320 VSSGSACTSASLEPSY-----VLRAL-GI-NDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKL 378 (402)
T ss_pred EechhhcCCCCCCccH-----HHHHc-CC-ChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999875433221 11110 00 000111399999999999999999999999987653
No 16
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=8.1e-41 Score=358.05 Aligned_cols=377 Identities=20% Similarity=0.282 Sum_probs=290.4
Q ss_pred HHHHHhhhccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCC
Q 037063 96 ADRIRAQDYFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGS 175 (588)
Q Consensus 96 ~~~iR~~~f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~ 175 (588)
+.++|+ +||.++....+|||++|.+++|+.+++++.+.+.. ...++.+. ...+ .
T Consensus 3 ~~~~r~-~f~~~~~~~~~yl~~~~~~~~p~~v~~a~~~~~~~-~~~~~~~~-------------------~~~~-----~ 56 (397)
T TIGR01976 3 VEAVRG-QFPALADGDRVFFDNPAGTQIPQSVADAVSAALTR-SNANRGGA-------------------YESS-----R 56 (397)
T ss_pred hhHHHh-hCCcCCCCCeEEecCCccCCCCHHHHHHHHHHHHh-cCCCCCCC-------------------chHH-----H
Confidence 456776 79988421279999999999999999998766532 12232110 0000 0
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhC--CCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEE
Q 037063 176 EESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESY--PFYSNPRLLT-VYDHENEAAALMIESSKKRGARVS 252 (588)
Q Consensus 176 ~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~--~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~ 252 (588)
...+.++++|+.+++++|+++++ |++++|+|++++++..++ .+++||+|++ ..+|++....| ...++..|++++
T Consensus 57 ~~~~~~~~l~~~ia~~~~~~~~~--v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~-~~~~~~~g~~~~ 133 (397)
T TIGR01976 57 RADQVVDDAREAVADLLNADPPE--VVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPW-LQAAERAGAKVK 133 (397)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCe--EEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHH-HHHHHhcCCEEE
Confidence 12467899999999999997654 999999999999888776 4789999665 56777754444 466788999999
Q ss_pred EEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCC
Q 037063 253 SAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLG 331 (588)
Q Consensus 253 ~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~ 331 (588)
.++++.+++.++.++++++|+ +++++|++++++|+||.++|+++| ++|+++|+++++|++|+.+ ...++
T Consensus 134 ~~~~~~~~~~~~~~~l~~~i~--------~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~--~~~~~ 203 (397)
T TIGR01976 134 WARVDEATGELHPDDLASLLS--------PRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAP--HGLID 203 (397)
T ss_pred EEeccccCCCcCHHHHHHhcC--------CCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhcc--ccCCC
Confidence 999875468899999999997 689999999999999999999999 9999999999999999876 34555
Q ss_pred CCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchh
Q 037063 332 LSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVS 411 (588)
Q Consensus 332 l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~ 411 (588)
+..+++|++++|+||++| |. +|++++++++++.+.+..... .. .. ...+| +.||+++..+
T Consensus 204 ~~~~~~d~~~~s~~K~~g--~~-~G~l~~~~~~~~~l~~~~~~~--~~------------~~-~~~~~-~~gt~~~~~~- 263 (397)
T TIGR01976 204 VQATGADFLTCSAYKFFG--PH-MGILWGRPELLMNLPPYKLTF--SY------------DT-GPERF-ELGTPQYELL- 263 (397)
T ss_pred HHHcCCCEEEEechhhcC--Cc-eEEEEEcHHHHhhCCCccccC--cc------------CC-Ccchh-cCCCCCHHHH-
Confidence 666679999999999998 54 899999999888776654321 10 00 11267 8999998886
Q ss_pred hHHHHHHHHHHHHHhC--------------HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE
Q 037063 412 SKLVECKGLDHADALG--------------LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA 477 (588)
Q Consensus 412 ~~~al~~aL~~l~~~G--------------~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~ 477 (588)
+++..|++++.++| ++++.+|+.+|+++++++|.++ ++++++++.+...+++++.
T Consensus 264 --~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~---------~~~~~~~~~~~~~~~~~~~ 332 (397)
T TIGR01976 264 --AGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDL---------PGVTLYGVARLAARVPTVS 332 (397)
T ss_pred --HHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcC---------CCEEEeCCCCccCCCceEE
Confidence 78889999998876 6888999999999999999885 5688988744345788999
Q ss_pred EEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHH
Q 037063 478 FNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYR 557 (588)
Q Consensus 478 f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~ 557 (588)
|.+.+ .+...+.+.|.++||.++.|++|.+. +.... +. ....+.||||+|+++|.+||++
T Consensus 333 ~~~~~-----~~~~~l~~~L~~~gI~v~~~~~~~~~------------~~~~~--~~-~~~~~~iRis~~~~~t~~di~~ 392 (397)
T TIGR01976 333 FTVHG-----LPPQRVVRRLADQGIDAWAGHFYAVR------------LLRRL--GL-NDEGGVVRVGLAHYNTAEEVDR 392 (397)
T ss_pred EEeCC-----cCHHHHHHHHHHCCeEEEeCccchHH------------HHHHh--CC-CCCCCeEEEEeeccCCHHHHHH
Confidence 98865 45677888888899999999888521 11110 00 0112389999999999999999
Q ss_pred HHHHH
Q 037063 558 LWAFV 562 (588)
Q Consensus 558 li~~l 562 (588)
+++.|
T Consensus 393 l~~~l 397 (397)
T TIGR01976 393 LLEAL 397 (397)
T ss_pred HHHhC
Confidence 99864
No 17
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=100.00 E-value=5.2e-40 Score=352.75 Aligned_cols=385 Identities=16% Similarity=0.174 Sum_probs=279.5
Q ss_pred hhHHHHHhhhccCCCC---CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccc
Q 037063 94 DQADRIRAQDYFHLSL---NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSW 170 (588)
Q Consensus 94 ~~~~~iR~~~f~~l~~---~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~ 170 (588)
..++.+|+ +||.+.. ++.+|||+++.|+.|..+.+++.+++.. ++++.+.+ +
T Consensus 8 ~~~~~~r~-~f~~~~~~~~~~~iyld~~a~g~~p~~v~~a~~~~~~~--~~~~~~~~----------------------~ 62 (406)
T TIGR01814 8 DPLRALRD-EFHLPKIGDENAVIYLDGNSLGLMPKAARNALKEELDK--WAKIAIRG----------------------H 62 (406)
T ss_pred ChHHHHHH-hcCCCcccCCCCcEEecCCCcCcCcHHHHHHHHHHHHH--HHHhhhcc----------------------C
Confidence 35667885 5986521 4689999999999999999998665532 22221100 0
Q ss_pred cccCC-chhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC---eEEE-cCCCchhHHHHHHHHHH
Q 037063 171 LQYGS-EESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP---RLLT-VYDHENEAAALMIESSK 245 (588)
Q Consensus 171 ~~~g~-~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd---~ll~-~~e~~s~~~~~~~~~a~ 245 (588)
..+. ....+.++. +.+ +++|+++++ |+||+|+|+++++++.++ +++++ +|++ ..+|+++.+.| ...++
T Consensus 63 -~~~~~~~~~~~~~~-~~~-~l~g~~~~~--v~~~~~~t~~l~~~~~~~-~~~~~~~~~i~~~~~~~~s~~~~~-~~~~~ 135 (406)
T TIGR01814 63 -NTGKAPWFTLDESL-LKL-RLVGAKEDE--VVVMNTLTINLHLLLASF-YKPTPKRYKILLEAKAFPSDHYAI-ESQLQ 135 (406)
T ss_pred -ccCCCChhhhhhhh-ccc-cccCCCCCc--EEEeCCchHHHHHHHHHh-cCCcCCccEEEecCCCCChHHHHH-HHHHH
Confidence 0000 012233333 445 899998766 999999999999999998 66643 4554 57888866665 45667
Q ss_pred hcCCEE----EEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCC
Q 037063 246 KRGARV----SSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDAT 320 (588)
Q Consensus 246 ~~G~~v----~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa 320 (588)
+.|+++ +.++.+ .++.++++++++.+.. ..++|++|++++++|.||.++|+++| ++||++|++++||++
T Consensus 136 ~~g~~~~~~~~~~~~~-~~g~~~~~~l~~~~~~-----~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~a 209 (406)
T TIGR01814 136 LHGLTVEESMVQIEPR-EEETLRLEDILDTIEK-----NGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLA 209 (406)
T ss_pred hcCCCcccceEEeccC-CCCccCHHHHHHHHHh-----cCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcc
Confidence 789987 455554 4577899999988851 12689999999999999999999999 999999999999999
Q ss_pred CcCCCCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccc
Q 037063 321 ALGSKDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS 400 (588)
Q Consensus 321 ~~~~~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~ 400 (588)
|+++ ..++++..+++||+++|+|||++. |.| |++|++++....+.+...|+.+......... ...+...+ .+|
T Consensus 210 q~~G--~~~id~~~~gvD~~~~s~hK~l~g-~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~-~~~~~~~~-~~~- 282 (406)
T TIGR01814 210 HAVG--NVPLDLHDWGVDFACWCTYKYLNA-GPG-AGAFVHEKHAHTERPRLAGWWGHARPTRFKM-DNTLGLIP-CGF- 282 (406)
T ss_pred cccC--CcccccccCCCCEEEEcCccccCC-CCC-eEEEEehhhhhhcCCCCCcccCCCCcccccc-ccccCCCc-cce-
Confidence 9998 456777777799999999997643 448 7788877766556665544211111000000 00111112 267
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEe
Q 037063 401 KFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNV 480 (588)
Q Consensus 401 e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~ 480 (588)
+.||+++.++ +++.++|+++.++|++++.+|...|.+++++.|.++. . |.+++++++|.....++++++|.+
T Consensus 283 ~~GT~~~~~~---~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~-~----~~~~~~i~~~~~~~~r~~~v~~~~ 354 (406)
T TIGR01814 283 RISNPPILSV---AALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARC-G----GPPVLTIITPRDHAQRGCQLSLTH 354 (406)
T ss_pred eeCCccHHHH---HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhc-C----CCCceEEeCCCChhhcCCeEEEEe
Confidence 8899999986 8899999999999999999999999999999998741 0 135689998755445788999987
Q ss_pred ecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec-CCCCCHHHHHHHH
Q 037063 481 FDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL-GCLTNFEDTYRLW 559 (588)
Q Consensus 481 ~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl-g~~~t~eDv~~li 559 (588)
+ . +...+.+.|.++||.+... +.+.||+|+ |+|||.+||++++
T Consensus 355 ~-~-----~~~~~~~~L~~~gi~v~~~------------------------------~~~~iRiS~~~~~nt~~did~l~ 398 (406)
T TIGR01814 355 P-V-----PGKAVFQALIKRGVIGDKR------------------------------EPSVIRVAPVPLYNTFVDVYDAV 398 (406)
T ss_pred c-C-----CHHHHHHHHHHCCEEEecc------------------------------CCCeEEEechhccCCHHHHHHHH
Confidence 6 1 3667777788889976321 112899999 7999999999999
Q ss_pred HHHHHhhh
Q 037063 560 AFVSRFLD 567 (588)
Q Consensus 560 ~~l~~~l~ 567 (588)
+.|++++|
T Consensus 399 ~~l~~~~~ 406 (406)
T TIGR01814 399 NVLEEILD 406 (406)
T ss_pred HHHHHHhC
Confidence 99998764
No 18
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=4.3e-39 Score=342.88 Aligned_cols=370 Identities=14% Similarity=0.122 Sum_probs=276.9
Q ss_pred eeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHH
Q 037063 112 YVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDF 191 (588)
Q Consensus 112 ~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~ 191 (588)
++||||+++|++|+.+++++.+++. ..++||++. +. .+....++++++|+.++++
T Consensus 1 ~~yld~a~~~~~~~~v~~a~~~~~~-~~~~~~~~~---------------------~~---~~~~~~~~~~~~r~~la~~ 55 (381)
T PRK02948 1 MIYLDYAATTPMSKEALQTYQKAAS-QYFGNESSL---------------------HD---IGGTASSLLQVCRKTFAEM 55 (381)
T ss_pred CEeccCCCCCCCCHHHHHHHHHHHH-hcCCCCccc---------------------cH---HHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999999876664 345666321 00 1122367899999999999
Q ss_pred hCCCCCCceEEEecCHHHHHHHHHHhCC---CCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHH
Q 037063 192 MNISEDDYTLVFTANQSSAFKLLAESYP---FYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGK 267 (588)
Q Consensus 192 lga~~~e~~vvft~g~T~al~lv~~s~~---~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~ 267 (588)
+|+++++ |+||+|+|+++.+++.++- .++|++|+ +..+|++.... ...++..|++++.++++ +++.+|+++
T Consensus 56 ~g~~~~~--i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~--~~~~~~~g~~v~~v~~~-~~~~~d~~~ 130 (381)
T PRK02948 56 IGGEEQG--IYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSY--FQSLESQGYTVTEIPVD-KSGLIRLVD 130 (381)
T ss_pred hCCCCCe--EEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHH--HHHHHhCCCEEEEEeeC-CCCCCCHHH
Confidence 9997654 9999999999998877761 25688865 56677763332 34567789999999997 668899999
Q ss_pred HHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCc
Q 037063 268 LMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYK 346 (588)
Q Consensus 268 l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K 346 (588)
|++++. +++++|++++++|+||.++|+++| ++|+++|+++++|+++.++ ..++++..+++|++++|+||
T Consensus 131 l~~~l~--------~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g--~~~~~~~~~~~d~~~~s~~K 200 (381)
T PRK02948 131 LERAIT--------PDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFG--KLPIDVFEMGIDSLSVSAHK 200 (381)
T ss_pred HHHhcC--------CCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhcc--ccccCcccCCCCEEEecHHh
Confidence 999987 678999999999999999999999 9999999999999998887 34555666779999999999
Q ss_pred cCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHh
Q 037063 347 IFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL 426 (588)
Q Consensus 347 ~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~ 426 (588)
++| |.|+|+++++++. .+.+...+ +. .. .+| +.||++++++ +++.++++.+.+
T Consensus 201 ~~g--p~G~G~l~~~~~~--~~~~~~~~--~~-------------~~---~~~-~~~t~~~~~~---~a~~~al~~~~~- 253 (381)
T PRK02948 201 IYG--PKGVGAVYINPQV--RWKPVFPG--TT-------------HE---KGF-RPGTVNVPGI---AAFLTAAENILK- 253 (381)
T ss_pred cCC--CCcEEEEEEcCCC--CCCCcccC--CC-------------CC---CCc-CCCCccHHHH---HHHHHHHHHHHH-
Confidence 999 8899999999875 12222222 10 00 145 7889998886 788899988755
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEecc
Q 037063 427 GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSC 506 (588)
Q Consensus 427 G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~ 506 (588)
+++++.+++..+++++++.|+++ |.. +.+.++. ......+++|++.+ ++.+.+...|+++||.++.
T Consensus 254 ~~~~~~~~~~~~~~~l~~~L~~~-------~~~-v~~~~~~-~~~~~~i~~~~~~~-----~~~~~~~~~l~~~gI~v~~ 319 (381)
T PRK02948 254 NMQEESLRFKELRSYFLEQIQTL-------PLP-IEVEGHS-TSCLPHIIGVTIKG-----IEGQYTMLECNRRGIAIST 319 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-------CCC-EEEeCCC-ccCcCCEEEEEeCC-----CCHHHHHHhcccCCEEEEc
Confidence 47899999999999999999986 222 3333321 12234688888865 4567777777889999999
Q ss_pred ccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 507 GFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 507 G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
|+.|+.++..... .+..- +. ....+.+.||+|+|++||.|||++++++|+++++..
T Consensus 320 g~~c~~~~~~p~~-----~~~~~-~~-~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 320 GSACQVGKQEPSK-----TMLAI-GK-TYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred hHhcCCCCCCCCH-----HHHHc-CC-ChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999765432211 11110 00 000112389999999999999999999999987654
No 19
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=9.2e-38 Score=331.86 Aligned_cols=371 Identities=18% Similarity=0.224 Sum_probs=281.6
Q ss_pred eeecCCCCC-CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHH
Q 037063 113 VCFDYIGHG-LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDF 191 (588)
Q Consensus 113 vyLD~a~~g-l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~ 191 (588)
+|||+++.+ +.|..+++++.+.+.. ..++++.. .... +......++++|+.|+++
T Consensus 1 ~yld~a~~~~~~p~~v~~a~~~~~~~-~~~~~~~~--------------------~~~~---~~~~~~~~~~~~~~la~~ 56 (376)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMADFYKN-YGGSPGRG--------------------RYRL---ALRASREVEETRQLLAKL 56 (376)
T ss_pred CCccCcccCCCCCHHHHHHHHHHHHh-cCCCCCcc--------------------cchH---HHHHHHHHHHHHHHHHHH
Confidence 699999987 6888999888665532 22233110 0000 001146788999999999
Q ss_pred hCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHH
Q 037063 192 MNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMK 270 (588)
Q Consensus 192 lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~ 270 (588)
+|+++. +.|+||+|+|+++++++.++ +++||+|++ ..+|++....+ ..+++..|++++.++.+ +++.+|.++|++
T Consensus 57 ~~~~~~-~~v~~~~g~t~al~~~~~~~-~~~gd~vl~~~~~~~~~~~~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~ 132 (376)
T TIGR01977 57 FNAPSS-AHVVFTNNATTALNIALKGL-LKEGDHVITTPMEHNSVARPL-ECLKEQIGVEITIVKCD-NEGLISPERIKR 132 (376)
T ss_pred hCcCCC-CeEEEeCCHHHHHHHHHHhc-cCCCCEEEECcchhhHHHHHH-HHHHHHcCcEEEEEecC-CCCCcCHHHHHH
Confidence 999643 35999999999999999997 899999664 55676533333 56677789999999987 567899999999
Q ss_pred HHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccCC
Q 037063 271 KIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIFG 349 (588)
Q Consensus 271 ~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~G 349 (588)
+++ +++++|++++++|+||.++|+++| ++|+++|+++++|+++.++ ..++++..+++|++++|+||+++
T Consensus 133 ~~~--------~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g--~~~~~~~~~~~D~~~~s~~K~l~ 202 (376)
T TIGR01977 133 AIK--------TNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAG--VIPIDMTELAIDMLAFTGHKGLL 202 (376)
T ss_pred hcC--------CCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccC--ccCCCchhcCCCEEEeccccccc
Confidence 997 679999999999999999999999 9999999999999999988 45666667779999999999776
Q ss_pred CCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHH
Q 037063 350 ENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLI 429 (588)
Q Consensus 350 ~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~ 429 (588)
. |.|+|+++++++. .+++...++.+... ... ........+| +.||+++..+ +++.++++++.+.|++
T Consensus 203 ~-p~g~g~l~~~~~~--~~~~~~~~~~~~~~---~~~---~~~~~~~~r~-~~~t~~~~~~---~a~~~al~~~~~~g~~ 269 (376)
T TIGR01977 203 G-PQGTGGLYIREGI--KLKPLKSGGTGSHS---ALI---DQPSELPDRF-ESGTLNTPGI---AGLNAGIKFIEKIGIA 269 (376)
T ss_pred C-CCCceEEEEcCCc--CcCceecCCCcccc---ccc---cccccchhhc-cCCCCCHHHH---HHHHHHHHHHHHhCHH
Confidence 4 8999999999976 24444433211100 000 0000001267 7899998886 7888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhC-CcEecccc
Q 037063 430 LISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRH-NISLSCGF 508 (588)
Q Consensus 430 ~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~-gI~v~~G~ 508 (588)
.+.+|.+.+++++++.|.++ +++++++|.+...++++++|.+.+ ++...+.+.|.++ ||.++.|.
T Consensus 270 ~~~~~~~~l~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~ 335 (376)
T TIGR01977 270 NIAKKECMLTEKLLNGLREI---------NKVKIYGPADPANRVGVVSFTVEG-----IDSEEVADILDEKFDIATRTGL 335 (376)
T ss_pred HHHHHHHHHHHHHHHHHhcC---------CCeEEeCCCCccccCCeEEEEECC-----CCHHHHHHHHhccCCEEEEccc
Confidence 99999999999999999874 678999875544568899999875 4577788777766 99999998
Q ss_pred ccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 509 LQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 509 ~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
+|++... ..+.. ...+.||+|++.++|.+||++++++|++
T Consensus 336 ~~~~~~~--------~~~g~--------~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 336 HCAPLAH--------KTIGT--------FATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred ccchHHH--------HHhCC--------CCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 8863210 00000 1123899999999999999999999875
No 20
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=9.1e-38 Score=331.65 Aligned_cols=368 Identities=19% Similarity=0.257 Sum_probs=281.8
Q ss_pred eeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHh
Q 037063 113 VCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFM 192 (588)
Q Consensus 113 vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~l 192 (588)
+||||++++++|+.+++++.+++. ..+.||++. .+. .+....+.++++|+.+++++
T Consensus 1 ~yl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------------------~~~---~~~~~~~~~~~~~~~la~~~ 56 (373)
T cd06453 1 VYLDNAATSQKPQPVIDAIVDYYR-HYNANVHRG--------------------VHE---LSARATDAYEAAREKVARFI 56 (373)
T ss_pred CcccCccccCCCHHHHHHHHHHHH-hcCCCCCCC--------------------ccH---HHHHHHHHHHHHHHHHHHHh
Confidence 599999999999999999987764 345565321 000 01123677889999999999
Q ss_pred CCCCCCceEEEecCHHHHHHHHHHhCCCC--CCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHH
Q 037063 193 NISEDDYTLVFTANQSSAFKLLAESYPFY--SNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLM 269 (588)
Q Consensus 193 ga~~~e~~vvft~g~T~al~lv~~s~~~~--~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~ 269 (588)
|++.. ..|++|+|+|+|+++++.++... +|++|+ +..+|++....+ ...++..|++++.++.+ .++.+++++|+
T Consensus 57 ~~~~~-~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~l~ 133 (373)
T cd06453 57 NAPSP-DEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPW-QQLAERTGAKLKVVPVD-DDGQLDLEALE 133 (373)
T ss_pred CCCCC-CeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHH-HHHHhhcCcEEEEeecC-CCCCcCHHHHH
Confidence 99722 34999999999999999998443 889966 455666533333 55667789999999998 67889999999
Q ss_pred HHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccC
Q 037063 270 KKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIF 348 (588)
Q Consensus 270 ~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~ 348 (588)
+++. +++++|++++++|+||...|+++| ++|+++|+++++|+++..+ ..++++...++|++++|+||++
T Consensus 134 ~~l~--------~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~--~~~~~~~~~~~d~~~~s~~K~~ 203 (373)
T cd06453 134 KLLT--------ERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAG--HMPVDVQDLGCDFLAFSGHKML 203 (373)
T ss_pred HHhc--------CCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcC--ceeeeccccCCCEEEecccccc
Confidence 9998 689999999999999999999999 9999999999999998776 2334444456999999999999
Q ss_pred CCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCH
Q 037063 349 GENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGL 428 (588)
Q Consensus 349 G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~ 428 (588)
| +.|+|+++++++.++.+.+...++ ........ +...+.... .+| +.||+++..+ .++..+++.+.+.|+
T Consensus 204 ~--~~g~g~~~~~~~~~~~~~~~~~g~-~~~~~~~~--~~~~~~~~~-~~~-~~~t~~~~~~---~al~~al~~l~~~g~ 273 (373)
T cd06453 204 G--PTGIGVLYGKEELLEEMPPYGGGG-EMIEEVSF--EETTYADLP-HKF-EAGTPNIAGA---IGLGAAIDYLEKIGM 273 (373)
T ss_pred C--CCCcEEEEEchHHhhcCCCeecCC-Cccccccc--cccccCCCc-ccc-CCCCCCHHHH---HHHHHHHHHHHHcCH
Confidence 9 578999999999988888766443 22221100 000111111 256 6889998875 788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEecccc
Q 037063 429 ILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGF 508 (588)
Q Consensus 429 ~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~ 508 (588)
+.+.++...+++++++.|.++ ++++++.+. ..+++++.|.+.+ ++...+.+.|.++||.++.|.
T Consensus 274 ~~~~~~~~~~~~~l~~~l~~~---------~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~i~~~l~~~gi~i~~g~ 337 (373)
T cd06453 274 EAIAAHEHELTAYALERLSEI---------PGVRVYGDA--EDRAGVVSFNLEG-----IHPHDVATILDQYGIAVRAGH 337 (373)
T ss_pred HHHHHHHHHHHHHHHHHHhcC---------CCeEEeCCc--cccCCeEEEEECC-----cCHHHHHHHHHHCCEEeccCc
Confidence 999999999999999999884 678887543 2457899998765 457788888888999999998
Q ss_pred ccCcccccchHHHHHHHHhhhcCCCCCcCCc-cEEEEecCCCCCHHHHHHHHHHH
Q 037063 509 LQNIFFSGEYEQERVRVLETRSGTNETRSGV-SVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 509 ~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~-~~vRvSlg~~~t~eDv~~li~~l 562 (588)
.|... .+.. .|. ..||+|+|+++|.+|+++|+++|
T Consensus 338 ~~~~~-----------~~~~--------~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 338 HCAQP-----------LMRR--------LGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred cchhH-----------HHHH--------hCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 88421 1111 222 28999999999999999999874
No 21
>PRK14012 cysteine desulfurase; Provisional
Probab=100.00 E-value=9.9e-38 Score=334.95 Aligned_cols=371 Identities=16% Similarity=0.139 Sum_probs=274.2
Q ss_pred CeeeecCCCCCCCCHHHHHHhhhhccc-CcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 111 NYVCFDYIGHGLFSYSQMHSCSSNVHS-SAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 111 ~~vyLD~a~~gl~~~~~~~~~~~~~~~-~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
..+||||++++++|+.+++++.+++.. ..++|+++.+. .. +....+.++++|+.++
T Consensus 3 ~~iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~-------------------~~----~~~~~~~~~~~r~~ia 59 (404)
T PRK14012 3 LPIYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSH-------------------RF----GWQAEEAVDIARNQIA 59 (404)
T ss_pred ceEEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhh-------------------HH----HHHHHHHHHHHHHHHH
Confidence 469999999999999999998776631 23456532110 00 0112467889999999
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCC---CCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCH
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYP---FYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHS 265 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~---~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~ 265 (588)
+++|+++++ |+||+|+|+|+++++.++. +++||+|+ +..+|+++...+ ..++..|++++.++.+ +++.+|+
T Consensus 60 ~~~g~~~~~--v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~--~~~~~~g~~~~~v~~~-~~g~~d~ 134 (404)
T PRK14012 60 DLIGADPRE--IVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTC--RQLEREGFEVTYLDPQ-SNGIIDL 134 (404)
T ss_pred HHcCcCcCe--EEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHH--HHHHhCCCEEEEEccC-CCCcCCH
Confidence 999998765 9999999999999887653 57899965 567887644433 2345679999999998 6788999
Q ss_pred HHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEecc
Q 037063 266 GKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSF 344 (588)
Q Consensus 266 e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~ 344 (588)
++|+++|+ +++++|++++++|+||.++|+++| ++|+++|++|++|++|.++ ..++++....+|++++|+
T Consensus 135 ~~l~~~i~--------~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g--~~~~~~~~~~~D~~~~s~ 204 (404)
T PRK14012 135 EKLEAAMR--------DDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVG--KVPIDLSKLKVDLMSFSA 204 (404)
T ss_pred HHHHHhcC--------CCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcC--CcccCcccCCCCEEEEeh
Confidence 99999998 789999999999999999999999 9999999999999999887 234445555699999999
Q ss_pred CccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHH
Q 037063 345 YKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHAD 424 (588)
Q Consensus 345 ~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~ 424 (588)
||++| |.|+|+++++++...++.+...|+ +.. .+| +.||+++..+ .++.++++.++
T Consensus 205 ~K~~g--p~g~G~l~~~~~~~~~~~~~~~g~-~~~-----------------~~~-~~gt~~~~~~---~~l~~al~~~~ 260 (404)
T PRK14012 205 HKIYG--PKGIGALYVRRKPRVRLEAQMHGG-GHE-----------------RGM-RSGTLPTHQI---VGMGEAARIAK 260 (404)
T ss_pred hhccC--CCceEEEEEecCCCCCCCceecCC-Ccc-----------------CCc-cCCCcCHHHH---HHHHHHHHHHH
Confidence 99888 889999999998655565554442 210 145 6788888775 67888888776
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCC-CcccEEEEEeecCCCCCcCHHHHHHHHHhCCcE
Q 037063 425 ALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMF-DRGPSLAFNVFDWNGTRIDPALVQKLADRHNIS 503 (588)
Q Consensus 425 ~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~-~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~ 503 (588)
. +++.+.+|.+.|++++.+.|+++ ++++++++.... .....+.|.+.+ .+.+...| ++|.
T Consensus 261 ~-~~~~~~~~~~~l~~~l~~~L~~~---------~~i~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l--~~~~ 321 (404)
T PRK14012 261 E-EMATENERIRALRDRLWNGIKDI---------EEVYLNGDLEQRVPGNLNVSFNYVE-------GESLIMAL--KDLA 321 (404)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHhcC---------CCEEEeCCccccCCCEEEEEEeCcC-------HHHHHHhC--CCeE
Confidence 5 57888999999999999999874 667777643211 111245555432 34444444 4899
Q ss_pred eccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 504 LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 504 v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
|++|.+|.+......... ..+.. ......+.||+|+|+++|.+||+++++.|+++++..
T Consensus 322 i~~g~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 322 VSSGSACTSASLEPSYVL--RALGL-----NDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred EEchhhhCCCCCCCCHHH--HHcCC-----ChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999976543322111 00100 000112399999999999999999999999987654
No 22
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=100.00 E-value=4.9e-36 Score=316.15 Aligned_cols=320 Identities=16% Similarity=0.148 Sum_probs=252.1
Q ss_pred eecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHhC
Q 037063 114 CFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFMN 193 (588)
Q Consensus 114 yLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~lg 193 (588)
||||++++++|+.+++++.+++.. .++||++.. +. ++....+.++++|+.+++++|
T Consensus 1 yld~a~~~~~~~~v~~a~~~~~~~-~~~~~~~~~--------------------~~---~~~~~~~~~~~~r~~la~~~g 56 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLPWLLE-EFGNPSSRT--------------------HE---FGHNAKKAVERARKQVAEALG 56 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHh-cCCCCCchh--------------------hH---HHHHHHHHHHHHHHHHHHHhC
Confidence 899999999999999999776632 345663210 00 111235778999999999999
Q ss_pred CCCCCceEEEecCHHHHHHHHHHhCC---CCCC-CeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHH
Q 037063 194 ISEDDYTLVFTANQSSAFKLLAESYP---FYSN-PRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKL 268 (588)
Q Consensus 194 a~~~e~~vvft~g~T~al~lv~~s~~---~~~g-d~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l 268 (588)
+++++ |+||+|+|+++++++.++. .++| ++|+ ...+|++....| ..++..|++++.++++ +++.+++++|
T Consensus 57 ~~~~~--v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~--~~~~~~G~~v~~v~~~-~~~~~d~~~l 131 (353)
T TIGR03235 57 ADTEE--VIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPI--RALERNGFTVTYLPVD-ESGRIDVDEL 131 (353)
T ss_pred CCCCe--EEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHH--HHHHhcCCEEEEEccC-CCCcCCHHHH
Confidence 98765 9999999999999988762 2456 5555 567787744443 3446679999999997 5678999999
Q ss_pred HHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCcc
Q 037063 269 MKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKI 347 (588)
Q Consensus 269 ~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~ 347 (588)
+++++ +++++|++++++|+||.++|+++| ++|+++|+++++|++|.++ ..++++..+++|++++|+||+
T Consensus 132 ~~~l~--------~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g--~~~~~~~~~~~D~~~~s~~K~ 201 (353)
T TIGR03235 132 ADAIR--------PDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVG--KITVDLSADRIDLISCSGHKI 201 (353)
T ss_pred HHhCC--------CCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcC--CccccccccCCCEEEeehhhc
Confidence 99987 679999999999999999999999 9999999999999999988 455667777799999999999
Q ss_pred CCCCCCceEEEEEeCcchhc--ccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHH
Q 037063 348 FGENPSGFGCLFVKKSSASV--LSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADA 425 (588)
Q Consensus 348 ~G~~P~G~G~L~v~~~~~~~--l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~ 425 (588)
+| |.|+|+|+++++.... +++...++ +. ..+| +.||+++..+ +++.++++++.+
T Consensus 202 ~g--p~g~g~l~~~~~~~~~~~~~~~~~~~-~~-----------------~~~~-~~gt~~~~~~---~al~~al~~~~~ 257 (353)
T TIGR03235 202 YG--PKGIGALVIRKRGKPKAPLKPIMFGG-GQ-----------------ERGL-RPGTLPVHLI---VGMGEAAEIARR 257 (353)
T ss_pred CC--CCceEEEEEccCcccccccCceeeCC-CC-----------------cCcc-ccCCCChHHH---HHHHHHHHHHHh
Confidence 88 8899999999986432 44444331 11 0145 7899999886 788899998764
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEec
Q 037063 426 LGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLS 505 (588)
Q Consensus 426 ~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~ 505 (588)
|++++.+|+++|+++++++|.+ ++++++++.. ....++++|.+.+ ++.+.+.+.|++ +|.++
T Consensus 258 -~~~~~~~~~~~l~~~l~~~l~~----------~g~~~~~~~~-~~~~~i~~~~~~~-----~~~~~v~~~L~~-~i~v~ 319 (353)
T TIGR03235 258 -NAQAWEVKLRAMRNQLRDALQT----------LGVKLNGDPA-ETIPHILNFSIDG-----VNSEALIVNLRA-DAAVS 319 (353)
T ss_pred -hHHHHHHHHHHHHHHHHHHhcc----------CCeEEeCCcc-cccCCEEEEEeCC-----cCHHHHHHHHhC-CeEEE
Confidence 8899999999999999999976 3678887543 2346789998765 567888888865 99999
Q ss_pred cccccCccc
Q 037063 506 CGFLQNIFF 514 (588)
Q Consensus 506 ~G~~c~~~~ 514 (588)
+|..|..+.
T Consensus 320 ~g~~~~~~~ 328 (353)
T TIGR03235 320 TGSACSSSK 328 (353)
T ss_pred chhhcCCCC
Confidence 999997543
No 23
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=1.6e-35 Score=314.51 Aligned_cols=360 Identities=15% Similarity=0.093 Sum_probs=263.2
Q ss_pred cCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHH
Q 037063 105 FHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKI 184 (588)
Q Consensus 105 ~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~ 184 (588)
|.+. +..+|||.+.+++.|..|++++...+ .++.|. +....++++++
T Consensus 7 ~~~~-~~~~~f~~Gp~~~~~~~v~~a~~~~~----~~~~hr----------------------------~~~f~~~~~~~ 53 (378)
T PRK03080 7 PALR-PADPRFSSGPCKKRPGWQLEALADAL----LGRSHR----------------------------QKPVKALLKRV 53 (378)
T ss_pred CCcC-CCCCCcCCCCcCCChHHHHHHHHhhh----cccCcC----------------------------CHHHHHHHHHH
Confidence 4443 56889999999999988999975332 222210 01126889999
Q ss_pred HHHHHHHhCCCCCCceEEEec-CHHHHHHHHHHhCCCCC-CCeEEEcCCCchhHHHHHHHHHHhcCC-EEEEEeccCCCC
Q 037063 185 RKRIMDFMNISEDDYTLVFTA-NQSSAFKLLAESYPFYS-NPRLLTVYDHENEAAALMIESSKKRGA-RVSSAEFAWPNL 261 (588)
Q Consensus 185 r~~ia~~lga~~~e~~vvft~-g~T~al~lv~~s~~~~~-gd~ll~~~e~~s~~~~~~~~~a~~~G~-~v~~v~~~~~~~ 261 (588)
|+.+++++|++ ++++|+|++ |+|+++++++.++ +++ ++.++...+|.+ .|....+++.|+ +++.++.+ .+.
T Consensus 54 r~~l~~l~~~~-~~~~v~~~~gs~T~~~~~~~~~l-~~~~~~~vi~~g~f~~---~~~~~~~~~~g~~~v~~~~~~-~g~ 127 (378)
T PRK03080 54 IEGTRELLSLP-EGYEVGIVPGSDTGAWEMALWSL-LGARRVDHLAWESFGS---KWATDVVKQLKLEDPRVLEAD-YGS 127 (378)
T ss_pred HHHHHHHhCCC-CCceEEEECCchHHHHHHHHHhc-CCCCcceEEEeCHHHH---HHHHHHHhhcCCCCceEeccC-CCC
Confidence 99999999995 345699885 9999999999999 775 445666666654 353334567899 99999887 344
Q ss_pred ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEE
Q 037063 262 RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFL 340 (588)
Q Consensus 262 ~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~v 340 (588)
.+++++ ++ . +++|+++|++|.||.++|+++| + |++|++++||++|+++ ..+++++. +||+
T Consensus 128 ~~d~~~----i~--------~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G--~~pidv~~--iD~~ 188 (378)
T PRK03080 128 LPDLSA----VD--------F-DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAF--ALPLDWSK--LDVY 188 (378)
T ss_pred CCCHhh----cC--------C-CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccc--cCCCCHHH--CcEE
Confidence 566554 33 2 5679999999999999999999 6 8899999999999999 67777765 7999
Q ss_pred EeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccc-cccccccccccCCCCCccchhhHHHHHHH
Q 037063 341 ICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIE-LETLDESSQSKFPESSISGVSSKLVECKG 419 (588)
Q Consensus 341 v~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~-~~~~~~~~f~e~GT~~~~~~~~~~al~~a 419 (588)
++|+|||++. |.|+|+||+++++++++.+...++ +..... +... ..... .+| +.||++.+++..+.++.++
T Consensus 189 ~~s~~K~l~~-P~G~g~l~v~~~~~~~~~p~~~~~-~~~~~~----~~~~~~~~~~-~~~-~~~t~~tp~i~~i~~l~~a 260 (378)
T PRK03080 189 TFSWQKVLGG-EGGHGMAILSPRAVERLESYTPAR-PIPKFF----RLTKGGKAIE-NSF-KGQTINTPSMLTVEDYLDQ 260 (378)
T ss_pred EEehhhhCCC-CCceEEEEECHHHHHhhhcccCCC-CCchhh----eeccchHHhh-hhh-cCCcccCchHHHHHHHHHH
Confidence 9999998874 899999999999998888765442 110000 0000 00001 145 5667666666556788999
Q ss_pred HHHHHHh-CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc-cEEEEEeecCCCCCcCHHHHHHHH
Q 037063 420 LDHADAL-GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG-PSLAFNVFDWNGTRIDPALVQKLA 497 (588)
Q Consensus 420 L~~l~~~-G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg-~iv~f~~~~~~g~~i~~~~v~~~l 497 (588)
|+++.+. |++++.+|.+.|++++++.|+++ ++++++.+.. ..++ .+++|++++.+ ..++.+.+.+++
T Consensus 261 l~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~---------~~~~~~~~~~-~~~s~~i~~~~~~~~~-~~~~~~~~~~l~ 329 (378)
T PRK03080 261 LDWANSIGGLDALIARTAANASVLYDWAEKT---------PWATPLVADP-ATRSNTSVTLDFVDAQ-AAVDAAAVAKLL 329 (378)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC---------CCcccccCCc-cccCccEEEEEcCCch-HHHHHHHHHHHH
Confidence 9999998 89999999999999999999985 4567775422 2344 68999876511 012344444544
Q ss_pred HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 498 DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 498 ~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
++||.++.|.+|. . .+ .||+|+++|||.+||++++++|++.+++
T Consensus 330 -~~~i~v~~g~~~~----------------~--------~~--~vRis~~~~~t~~di~~l~~al~~~~~~ 373 (378)
T PRK03080 330 -RENGAVDIEPYRD----------------A--------PN--GLRIWCGPTVEPADVEALTPWLDWAFER 373 (378)
T ss_pred -HcCCeeccccccC----------------C--------CC--cEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 5589998875541 0 12 8999999999999999999999987653
No 24
>PLN02409 serine--glyoxylate aminotransaminase
Probab=100.00 E-value=2.3e-33 Score=300.56 Aligned_cols=361 Identities=14% Similarity=0.067 Sum_probs=272.8
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
++..||.+.|-...++.+++++.+.+.. | . . ....++++++|+.++
T Consensus 7 ~~~~~l~~pGP~~~~~~V~~a~~~~~~~------~------------------~----~------~~~~~~~~~~~~~l~ 52 (401)
T PLN02409 7 PGRNHLFVPGPVNIPERVLRAMNRPNED------H------------------R----S------PAFPALTKELLEDVK 52 (401)
T ss_pred CCCceeccCCCCCCCHHHHHHhcCCCCC------C------------------C----C------HHHHHHHHHHHHHHH
Confidence 4567899999999999999997533210 0 0 0 012578999999999
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHH
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKL 268 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l 268 (588)
+++|++++ +.+++++++|+++..++.++ +++||+|+ +..+|++ ..| ...+++.|++++.++.++ +..++.++|
T Consensus 53 ~~~g~~~~-~~vi~~~~gt~a~~~a~~~~-~~~Gd~Vlv~~~~~~~--~~~-~~~~~~~g~~v~~v~~~~-~~~~~~~~l 126 (401)
T PLN02409 53 YIFKTKSG-TPFIFPTTGTGAWESALTNT-LSPGDKVVSFRIGQFS--LLW-IDQMQRLNFDVDVVESPW-GQGADLDIL 126 (401)
T ss_pred HHhCCCCC-CEEEEeCCcHHHHHHHHHhc-CCCCCEEEEeCCCchh--HHH-HHHHHHcCCceEEEECCC-CCCCCHHHH
Confidence 99999743 46999999999999999888 89999965 5667774 445 567888999999999974 345899999
Q ss_pred HHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HH--HHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccC
Q 037063 269 MKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SV--AAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFY 345 (588)
Q Consensus 269 ~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~--a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~ 345 (588)
+++++. ...+++++|+++|++|+||.++|+++| ++ |+++|+++++|++|+++ ..++++..+++|++++|+|
T Consensus 127 ~~~l~~----~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g--~~~id~~~~~~D~~~~s~~ 200 (401)
T PLN02409 127 KSKLRQ----DTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIG--ALDFRMDEWGVDVALTGSQ 200 (401)
T ss_pred HHHHhh----CcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccC--CccccccccCccEEEEcCc
Confidence 999971 001279999999999999999999999 99 99999999999999987 4566666677999999999
Q ss_pred ccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHH
Q 037063 346 KIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADA 425 (588)
Q Consensus 346 K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~ 425 (588)
|+++. |.|+|+|++++++++++.+..... ...+... ...+... ..+ +.+|+++..+ +++..+++++.+
T Consensus 201 K~l~~-P~G~G~l~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~--g~~-~~~Tp~~~~~---~al~~al~~~~~ 268 (401)
T PLN02409 201 KALSL-PTGLGIVCASPKALEASKTAKSPR-VFFDWAD----YLKFYKL--GTY-WPYTPSIQLL---YGLRAALDLIFE 268 (401)
T ss_pred cccCc-CCCcceeEECHHHHHHHhcCCCCC-eecCHHH----HHHHHhc--CCC-CCCCccHHHH---HHHHHHHHHHHH
Confidence 97764 889999999999888776532110 0000000 0000000 012 3568887775 889999999999
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc-cEEEEEeecCCCCCcCHHHHH-HHHHhCCcE
Q 037063 426 LGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG-PSLAFNVFDWNGTRIDPALVQ-KLADRHNIS 503 (588)
Q Consensus 426 ~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg-~iv~f~~~~~~g~~i~~~~v~-~~l~~~gI~ 503 (588)
.|++++.+|.+.|++++++.|.++ +++++++.. ..+. .+++|.++. | ++...+. ++++++||.
T Consensus 269 ~G~e~i~~~~~~l~~~l~~~L~~~----------g~~~~~~~~-~~~s~~v~~~~~p~--~--~~~~~l~~~l~~~~~i~ 333 (401)
T PLN02409 269 EGLENVIARHARLGEATRLAVEAW----------GLKLCTKKP-EWRSDTVTAVVVPE--G--IDSAEIVKNAWKKYNLS 333 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc----------CCeeccCCh-hhcccceEEEeCCC--C--CCHHHHHHHHHHhCCEE
Confidence 999999999999999999999875 467777533 2345 455576653 1 5566665 566788999
Q ss_pred eccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 504 LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 504 v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
++.|... .....+||+...|++.+||.+++++|.+.|++.
T Consensus 334 i~~G~~~--------------------------~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 334 LGLGLNK--------------------------VAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred EEcCCCc--------------------------ccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 9887322 111289999999999999999999999988763
No 25
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=3e-32 Score=287.50 Aligned_cols=320 Identities=14% Similarity=0.123 Sum_probs=242.9
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.+..+++|+.+++++|+++ ++.+++|+|+|+|+++++.++ +++|++|++. ..|+++ .+ ...++..|++++.++.
T Consensus 31 ~~~~~~~~~~la~~~g~~~-~~~~~~~~~~t~al~~~~~~~-~~~g~~vl~~~~~~~~~--~~-~~~~~~~g~~~~~v~~ 105 (356)
T cd06451 31 LALMDEILEGLRYVFQTEN-GLTFLLSGSGTGAMEAALSNL-LEPGDKVLVGVNGVFGD--RW-ADMAERYGADVDVVEK 105 (356)
T ss_pred HHHHHHHHHHHHHHhcCCC-CCEEEEecCcHHHHHHHHHHh-CCCCCEEEEecCCchhH--HH-HHHHHHhCCCeEEeec
Confidence 5678899999999999953 346889999999999999999 7899997654 445542 23 3566788999999998
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCC-cceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKK-KRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSL 334 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~-~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~ 334 (588)
+ +++.++.+++++.++ + ++++|++++++|++|.+.|+++| ++|+++|+++++|+++.++ ..++++..
T Consensus 106 ~-~~~~~~~~~l~~~i~--------~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g--~~~~~~~~ 174 (356)
T cd06451 106 P-WGEAVSPEEIAEALE--------QHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLG--GEPFRMDE 174 (356)
T ss_pred C-CCCCCCHHHHHHHHh--------ccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhcc--Cccccccc
Confidence 7 567899999999997 4 78999999999999999999999 9999999999999998876 23344445
Q ss_pred CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccC--CCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 335 FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSG--STSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 335 ~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~--~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
+++|++++|+||+||. |.|+|++++++++++.+.. ...+ +...... ..+......+ +.||+++..+
T Consensus 175 ~~~d~~~~s~~K~l~~-p~g~G~l~~~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~~-~~~t~~~~~~-- 242 (356)
T cd06451 175 WGVDVAYTGSQKALGA-PPGLGPIAFSERALERIKKKTKPKG--FYFDLLL------LLKYWGEGYS-YPHTPPVNLL-- 242 (356)
T ss_pred cCccEEEecCchhccC-CCCcceeEECHHHHHHHHhcCCCCc--eeecHHH------HHhhhcccCC-CCCCChHHHH--
Confidence 5699999999998885 8899999999998877653 1111 1100000 0000001023 6778887765
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHH
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~ 492 (588)
+++.++++++.+.|++++.++.+.+++++++.|..+ +++++++.. .+++++.+...+. + ++...
T Consensus 243 -~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~--~~~~~~~~~~~~~-~--~~~~~ 306 (356)
T cd06451 243 -YALREALDLILEEGLENRWARHRRLAKALREGLEAL----------GLKLLAKPE--LRSPTVTAVLVPE-G--VDGDE 306 (356)
T ss_pred -HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc----------CCeeccCcc--cCCCceEEEECCC-C--CCHHH
Confidence 678899999988899999999999999999999984 356665422 3455554433221 1 45677
Q ss_pred HHHHHHhC-CcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 493 VQKLADRH-NISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 493 v~~~l~~~-gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
+.+.|.++ ||.++.|..|. ..+ +||+|++.++|.|||++++++|+++++
T Consensus 307 ~~~~L~~~~gI~~~~g~~~~------------------------~~~--~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 307 VVRRLMKRYNIEIAGGLGPT------------------------AGK--VFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred HHHHHHHhCCEEEecccccc------------------------cCC--EEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 77777776 99998875431 012 899999999999999999999998764
No 26
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=100.00 E-value=6.8e-33 Score=292.15 Aligned_cols=341 Identities=14% Similarity=0.171 Sum_probs=238.4
Q ss_pred CCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHhCCCC
Q 037063 117 YIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFMNISE 196 (588)
Q Consensus 117 ~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~lga~~ 196 (588)
++|..+.|+.|++++.+++.. ++|++... +. .++ ...+..++++++|+.++++||++
T Consensus 4 ~pGp~~~p~~V~~a~~~~~~~--~~~~~rg~----------~~--------~~~--r~~~~~~~~~~~r~~l~~l~~~~- 60 (355)
T cd00611 4 SAGPAALPEEVLEQAQKELLD--FNGLGMSV----------ME--------MSH--RSKDFEAIVNEAESDLRELLNIP- 60 (355)
T ss_pred CCCCCCCCHHHHHHHHHHHhh--cccCCccc----------cc--------cCC--CCHHHHHHHHHHHHHHHHHhCCC-
Confidence 378889999999999877632 23553110 11 110 01122588999999999999984
Q ss_pred CCceEEEecC-HHHHHHHHHHhCCCC---CCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCcc-C-HHHHHH
Q 037063 197 DDYTLVFTAN-QSSAFKLLAESYPFY---SNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRI-H-SGKLMK 270 (588)
Q Consensus 197 ~e~~vvft~g-~T~al~lv~~s~~~~---~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i-~-~e~l~~ 270 (588)
++++|+||+| +|+|+++++.++ +. +|++|++ ..+ ...+ .+.+++.|++++.++.+ +++.. + .+..+.
T Consensus 61 ~~~~vvf~~gs~T~a~~~~~~~l-~~~~~~~~~i~~-g~~---~~~~-~~~a~~~g~~~~~~~~~-~~g~~~~~~~~~~~ 133 (355)
T cd00611 61 DNYKVLFLQGGATGQFAAVPLNL-LGDKGTADYVVT-GAW---SAKA-AKEAKRYGGVVVIVAAK-EEGKYTKIPDVETW 133 (355)
T ss_pred CCceEEEEcCCchHHHHHHHHhc-CCCCCeEEEEEC-CHH---HHHH-HHHHHhcCCCcEEEecc-cccCCCCCCCHhhc
Confidence 4467999988 999999999999 55 4444443 121 1223 56778899999999986 33222 3 222223
Q ss_pred HHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccCCC
Q 037063 271 KIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIFGE 350 (588)
Q Consensus 271 ~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~G~ 350 (588)
.++ +++++|+++|.+|.||.+++ ++++.+|++++||++|+++ ..++|++.+ |++++|.||++|
T Consensus 134 ~~~--------~~~~lV~~~h~~t~tG~~~~----~i~~~~g~~~~VDa~qs~g--~~~idv~~~--~~~~ss~~K~lG- 196 (355)
T cd00611 134 DLA--------PDAAYVHYCSNETIHGVEFD----EVPDTGGVPLVADMSSNIL--SRPIDVSKF--GVIYAGAQKNLG- 196 (355)
T ss_pred CCC--------CCCCEEEEeCCcccccEEcc----eecccCCCeEEEEcccccc--CCCCCHHHh--CEEEeecccccC-
Confidence 333 78999999999999999843 3445599999999999998 566776653 455677999998
Q ss_pred CCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHh-CHH
Q 037063 351 NPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL-GLI 429 (588)
Q Consensus 351 ~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~-G~~ 429 (588)
|.|+|++++++++++++.+.... ... ...... .....||+|+.++ +++.+||+++.++ |++
T Consensus 197 -P~G~g~l~~~~~~~~~~~~~~~~---~~~-------~~~~~~----~~~~~~Tpn~~~i---~~L~aal~~l~~~gg~e 258 (355)
T cd00611 197 -PAGVTVVIVRKDLLGKARKITPS---MLN-------YKTHAD----NNSLYNTPPTFAI---YMMGLVLKWLKEQGGVE 258 (355)
T ss_pred -CCceEEEEECHHHHhhcccCCCC---ccc-------HHHHHh----cCCCCCCChHHHH---HHHHHHHHHHHHcCCHH
Confidence 88999999999998877664321 110 000001 1113689999886 8999999999999 799
Q ss_pred HHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEe-CCCCCCCcc-cEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccc
Q 037063 430 LISNRARYLINWLANALMNLHHPHSETGIPLVRIY-GPKVMFDRG-PSLAFNVFDWNGTRIDPALVQKLADRHNISLSCG 507 (588)
Q Consensus 430 ~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~-~p~~~~~rg-~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G 507 (588)
++.+|.+.|++++++.|.++ |++ | .+..+..|. .+++|++.+. .+. ..+...+.+.||.+..|
T Consensus 259 ~i~~~~~~l~~~l~~~l~~~---------~gl--~~~~~~~~~rs~~vvsf~~~~~---~l~-~~~~~~~~r~G~~~~~~ 323 (355)
T cd00611 259 AMEKRNRQKAQLLYDTIDNS---------NGF--YRGPVDKRARSRMNVPFRLGKE---ELE-KEFLKEAEAAGMIGLKG 323 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhC---------ccc--cccCCCHHHcCceEEEEEcCCh---hhh-HHHHHHHHHCCCcccCC
Confidence 99999999999999999985 453 3 222222455 5699998762 011 23333455567754433
Q ss_pred cccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 508 FLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 508 ~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
.. ..| .||+|+++|||.|||++|+++|+++
T Consensus 324 ~~--------------------------~~g--~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 324 HR--------------------------SVG--GIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred Cc--------------------------ccC--eEEEEccCCCCHHHHHHHHHHHHHH
Confidence 10 023 8999999999999999999999885
No 27
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=100.00 E-value=4.4e-31 Score=276.79 Aligned_cols=341 Identities=14% Similarity=0.142 Sum_probs=244.6
Q ss_pred CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHhCCCCCCce
Q 037063 121 GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFMNISEDDYT 200 (588)
Q Consensus 121 gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~lga~~~e~~ 200 (588)
++.|..|++++.+++.. +.|.+.+. +.+++++ .+-.++++++|+.++++|+++ ++|+
T Consensus 1 ~~~p~~v~~~~~~~~~~--~~~~~~~~----------~~~~hr~----------~~f~~~~~~~~~~l~~l~~~~-~~~~ 57 (349)
T TIGR01364 1 AALPEEVLEQAQKELLN--FNGTGMSV----------MEISHRS----------KEFEAVANEAESDLRELLNIP-DNYE 57 (349)
T ss_pred CCCCHHHHHHHHHHHhC--ccCCCccc----------cccCCCc----------hHHHHHHHHHHHHHHHHhCCC-CCce
Confidence 36899999998777632 22432211 1111110 111489999999999999984 4467
Q ss_pred EEEecC-HHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCC---CCccCHHHHHHHHhhh
Q 037063 201 LVFTAN-QSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWP---NLRIHSGKLMKKIVGK 275 (588)
Q Consensus 201 vvft~g-~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~---~~~i~~e~l~~~i~~~ 275 (588)
|+|++| +|+|++.++.++ +.+|++++ .....++ ..| .+.|++.|+ +..+..+.. ...+++++++ ++
T Consensus 58 v~~~~gsgT~a~ea~~~nl-~~~~~~~l~i~~G~fg--~r~-~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~-- 128 (349)
T TIGR01364 58 VLFLQGGATGQFAAVPLNL-LAEGKVADYIVTGAWS--KKA-AKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--IS-- 128 (349)
T ss_pred EEEEcCCchHHHHHHHHhc-CCCCCeEEEEECCHHH--HHH-HHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CC--
Confidence 888876 999999999999 77898843 4444442 334 788999999 777775411 1124444433 22
Q ss_pred ccccCCCcceEEEEeCCCCCCCccCCHHHHHHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccCCCCCCce
Q 037063 276 RKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIFGENPSGF 355 (588)
Q Consensus 276 ~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~ 355 (588)
+++++|+++|.++.||+.+| ++++.++++++||++|+++ ..+++++. .||+++|.||++| |.|+
T Consensus 129 ------~~~~~v~~th~ETstGv~~~----~l~~~~~~l~iVDavss~g--~~~id~~~--~d~~~~ssqK~lg--P~Gl 192 (349)
T TIGR01364 129 ------EDAAYVHYCANETIHGVEFR----ELPDVKNAPLVADMSSNIL--SRPIDVSK--FGLIYAGAQKNIG--PAGL 192 (349)
T ss_pred ------CCCCEEEEcCCCCcccEecc----eecccCCCeEEEEcccccc--CccCCHHH--ccEEEEecccccC--CCce
Confidence 57999999999999999988 5566689999999999998 56777665 5799999999998 8899
Q ss_pred EEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHh-CHHHHHHH
Q 037063 356 GCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL-GLILISNR 434 (588)
Q Consensus 356 G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~-G~~~i~~r 434 (588)
|++++++++++++.+.... ..+ ...... .....|||++..+ +++.++|+++.++ |++++.+|
T Consensus 193 g~l~~s~~~~~~~~~~~~~---~~~-------~~~~~~----~~~~~~Tp~~~~i---~al~~al~~l~~~gG~e~i~~r 255 (349)
T TIGR01364 193 TVVIVRKDLLGRASRITPS---MLN-------YKIHAE----NDSMYNTPPTFAI---YVSGLVFKWLKEQGGVKAIEKR 255 (349)
T ss_pred EEEEECHHHHhhcccCCCC---cch-------HHHHHh----cCCCCCCCcHHHH---HHHHHHHHHHHHcCCHHHHHHH
Confidence 9999999999887663211 110 000000 0113579998886 8999999999999 79999999
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc-cEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcc
Q 037063 435 ARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG-PSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIF 513 (588)
Q Consensus 435 ~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg-~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~ 513 (588)
.+.|++++++.|+++ +++..+.. .+..++ .+++|++.+. .+. ..+.+.+.+.||.+..|..
T Consensus 256 ~~~l~~~l~~~l~~~---------~gl~~~~~-~~~~rs~~v~sf~~~~~---~~~-~~~~~~~~~~Gi~~~~~~~---- 317 (349)
T TIGR01364 256 NQAKAQLLYDTIDNS---------NGFYRNPV-DPRNRSRMNVVFTLGNE---ELE-KRFLKEAEERGLVSLKGHR---- 317 (349)
T ss_pred HHHHHHHHHHHHHhC---------CCeeccCC-CHHHcCCeEEEEecCCh---hHh-HHHHHHHHHCCCcccCCcc----
Confidence 999999999999996 45444432 112355 6789998752 122 4454566778886665521
Q ss_pred cccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 514 FSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 514 ~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
..| .||+|++.|||.|||++|+++|++++++
T Consensus 318 ----------------------~~g--~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 318 ----------------------SVG--GMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred ----------------------ccC--eeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 023 8999999999999999999999997754
No 28
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=100.00 E-value=2.9e-30 Score=273.19 Aligned_cols=323 Identities=12% Similarity=0.069 Sum_probs=237.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCe-EEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPR-LLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~-ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.+.++++|+.+++++|+++++..|+||+|+|+|+++++.++ +.+|++ |+....++. .. +...+++.|++++.++.
T Consensus 34 ~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l-~~~~~~vlv~~~~~~~--~~-~~~~a~~~g~~~~~v~~ 109 (363)
T TIGR02326 34 NIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSA-VPKDGKLLVVINGAYG--AR-IVQIAEYLGIPHHVVDT 109 (363)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhc-CCCCCeEEEEeCChhh--HH-HHHHHHHcCCceEEEeC
Confidence 56789999999999999765446999999999999999999 677777 443333332 11 24667889999999998
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ +++.+++++++++++. .+++++|++++++|+||.++|+++| ++||++|++++||++|.++ ..++++..+
T Consensus 110 ~-~~~~~d~~~l~~~l~~------~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g--~~~~~~~~~ 180 (363)
T TIGR02326 110 G-EVEPPDVVEVEAILAA------DPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFG--GIPIDIAEL 180 (363)
T ss_pred C-CCCCCCHHHHHHHHhh------CCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEcccccc--Ccccchhhc
Confidence 7 5678999999999872 1356789999999999999999999 9999999999999999887 345666667
Q ss_pred CCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccc-ccccccccCCCCCccchhhHH
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELET-LDESSQSKFPESSISGVSSKL 414 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~-~~~~~f~e~GT~~~~~~~~~~ 414 (588)
++|++++|+||+++. |.|+|+++++++.++.+.+...+ ...+.... ...+.. ....+| |++...+ .
T Consensus 181 ~~D~~~~s~~K~l~~-p~G~G~l~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~f----t~~~~~~---~ 247 (363)
T TIGR02326 181 HIDYLISSANKCIQG-VPGFGFVIARQAELAACKGNARS--LSLDLYDQ---WRCMEDNHGKWRF----TSPTHVV---H 247 (363)
T ss_pred CccEEEecCcccccc-CCcceEEEECHHHHHHhhcCCCc--eeecHHHH---HHHHhccCCCCCC----CCcHHHH---H
Confidence 799999999996642 88999999999887766432211 00000000 000000 001133 4555554 7
Q ss_pred HHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE-EEEEeecCCCCCcCHHH
Q 037063 415 VECKGLDHADAL-GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS-LAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 415 al~~aL~~l~~~-G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i-v~f~~~~~~g~~i~~~~ 492 (588)
++.++++.+... |++++.+++..+++++++.|.++ +++++.+.. .++++ ++|.+++. ..++...
T Consensus 248 al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~ 313 (363)
T TIGR02326 248 AFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL----------GFEPLLDDE--IQSPIITSFYSPED--PDYRFAD 313 (363)
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc----------CCeeccCcc--cCCceEEEEECCCC--CCCCHHH
Confidence 788899887555 58999999999999999999885 344554432 34554 45665431 1145667
Q ss_pred HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 493 VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 493 v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
+.+.|.++||.+++|..+ +...||+|++.+++.||+++++++|+++|+
T Consensus 314 v~~~L~~~gi~v~~g~~~---------------------------~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 314 FYQRLKEQGFVIYPGKVS---------------------------QVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred HHHHHHHCCEEEECCcCC---------------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 778888899999887322 112899998878999999999999998764
No 29
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.98 E-value=1.1e-30 Score=275.09 Aligned_cols=348 Identities=13% Similarity=0.106 Sum_probs=248.5
Q ss_pred eecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHhC
Q 037063 114 CFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFMN 193 (588)
Q Consensus 114 yLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~lg 193 (588)
+|=++|.+..|+.|++++.+.+.. +.|.+.+. +. .++. ..+-.++++++|+.++++||
T Consensus 5 ~l~~pGP~~~p~~V~~a~~~~~~~--~~~~~~g~----------~~--------~~hr--~~~f~~~~~~~~~~l~~l~~ 62 (360)
T PRK05355 5 YNFSAGPAMLPEEVLEQAQQELLD--WNGSGMSV----------ME--------ISHR--SKEFEAVAEEAEADLRELLN 62 (360)
T ss_pred eeccCCCCCCCHHHHHHHHHHhhc--cccCCccc----------cc--------cCCC--CHHHHHHHHHHHHHHHHHhC
Confidence 444689999999999998765421 11211100 00 0010 01114899999999999999
Q ss_pred CCCCCceEEEe-cCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHH-
Q 037063 194 ISEDDYTLVFT-ANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMK- 270 (588)
Q Consensus 194 a~~~e~~vvft-~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~- 270 (588)
++ ++++|+|+ +++|.|+..++.++ +.+|++++ .....+ ...| .+.+++.|.. ..+..++..+..+..++++
T Consensus 63 ~~-~~~~v~~~~gsgt~~~Ea~~~nl-~~~g~~~l~i~~G~f--g~r~-~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~ 136 (360)
T PRK05355 63 IP-DNYKVLFLQGGASLQFAMVPMNL-LGGGKKADYVDTGSW--SKKA-IKEAKKYGEV-NVAASSEDDGFTYIPPLDEW 136 (360)
T ss_pred CC-CCcEEEEEcCCchHHHHHHHHhc-CCCCCeEEEEECCHH--HHHH-HHHHHHhCCc-eEEecccccCCCCCCChhhc
Confidence 84 34556666 67788999999999 88998843 333333 2334 6888999975 6666653355555556665
Q ss_pred HHhhhccccCCCcceEEEEeCCCCCCCccC-CHHHHHHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccCC
Q 037063 271 KIVGKRKKKKKKKRGLFVFPLQSKVTGARY-SYMWMSVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIFG 349 (588)
Q Consensus 271 ~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~-pl~~I~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~G 349 (588)
+|+ +++++|+++|.++.||+++ |+.+| +|++++||++|+++ ..+++++. .||+++|.||++|
T Consensus 137 ~l~--------~~~~~V~~th~eTstGv~~~~i~~i-----~g~l~vVDavss~g--~~~idv~~--~d~~~~ssqK~lg 199 (360)
T PRK05355 137 QLS--------DDAAYVHYTSNETIDGTEFHELPDT-----GDVPLVADMSSDIL--SRPIDVSK--FGLIYAGAQKNIG 199 (360)
T ss_pred cCC--------CCCCEEEEccCCCcceEecCccccc-----CCCcEEEEcCcccc--CccCCHHH--ccEEEEecccccc
Confidence 565 5789999999999999999 66555 89999999999998 56777766 4799999999998
Q ss_pred CCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHh-CH
Q 037063 350 ENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL-GL 428 (588)
Q Consensus 350 ~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~-G~ 428 (588)
|.|+|++++++++++++.+.. + ++.+.. .... ..+..||||+..+ +++.++|+++.++ |+
T Consensus 200 --P~Glg~l~~s~~~l~~~~~~~-~--~~~~~~-------~~~~----~~~~~~Tp~~~~i---~aL~~aL~~i~~~gG~ 260 (360)
T PRK05355 200 --PAGLTIVIVREDLLGRALPSI-P--SMLDYK-------THAD----NDSMYNTPPTFAI---YLAGLVFKWLKEQGGV 260 (360)
T ss_pred --CCceEEEEECHHHHhhcccCC-C--hHHHHH-------HHHh----cCCccCCCcHHHH---HHHHHHHHHHHHccCH
Confidence 899999999999998877642 2 111110 0000 1113689999886 8999999999999 89
Q ss_pred HHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc-cEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccc
Q 037063 429 ILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG-PSLAFNVFDWNGTRIDPALVQKLADRHNISLSCG 507 (588)
Q Consensus 429 ~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg-~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G 507 (588)
+++.+|.+.|++++++.|+++ +.+..+.+. ..|+ .+++|++++. +....+...+.+.||.+..|
T Consensus 261 e~i~~r~~~l~~~l~~~l~~~---------~~~~~~~~~--~~rs~~v~sf~~~~~----~~~~~~~~~~~~~Gi~~~~~ 325 (360)
T PRK05355 261 AAMEKRNQEKAALLYDAIDSS---------DFYRNPVAP--EDRSRMNVPFTLADE----ELDKKFLAEAKAAGLVGLKG 325 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHhC---------CCcccCCCh--hhcCCcEEEEEcCCh----HHHHHHHHHHHHCCCcccCC
Confidence 999999999999999999996 322222221 2355 6799998762 22244545556678876444
Q ss_pred cccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 508 FLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 508 ~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.. ..| .||+|++.|||.|||++|+++|++++..
T Consensus 326 ~~--------------------------~~g--~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 326 HR--------------------------SVG--GMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred CC--------------------------ccC--cEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 21 023 8999999999999999999999997754
No 30
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.97 E-value=6.2e-30 Score=269.80 Aligned_cols=314 Identities=12% Similarity=0.082 Sum_probs=227.4
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEe-cCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHh--cCCEEEEE
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFT-ANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKK--RGARVSSA 254 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft-~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~--~G~~v~~v 254 (588)
.++++++|+.+++++|+++ +++|+|+ +|+|.+++.++.++ +.+..-+++..+|.+.. ...++. .+.++..+
T Consensus 40 ~~~~~~~r~~l~~l~~~~~-~~~v~f~~gs~T~a~~~~~~~l-~~~~~l~i~~G~~~~~~----~~~a~~~~~~~~~~~~ 113 (361)
T TIGR01366 40 KNLVGRVREGLAELFSLPD-GYEVILGNGGATAFWDAATFGL-IEKKSLHLSFGEFSSKF----AKAVKLAPWLGEPIIV 113 (361)
T ss_pred HHHHHHHHHHHHHHhCCCC-CceEEEECCchhHHHHHHHHhc-ccccccEEecCHHHHHH----HHHHHhhhccCCceEE
Confidence 6889999999999999953 4679997 56999999999998 53322245555554322 333333 12377888
Q ss_pred eccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHHHcCcEEEEeCCCcCCCCCCCCCCCC
Q 037063 255 EFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAAEKGWHVLLDATALGSKDMDTLGLSL 334 (588)
Q Consensus 255 ~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~~g~~vvvDaa~~~~~d~~~l~l~~ 334 (588)
+.++ ...++. .+. +++++|+++|.+|.||.++|+++| +|++|++++||++|++| ..+++++.
T Consensus 114 ~~~~-~~~~~~-----~~~--------~~~~lV~~~h~et~tG~~~pi~~I--~~~~g~~~iVDavqs~g--~~~idv~~ 175 (361)
T TIGR01366 114 TADP-GSAPEP-----QAD--------PGVDVIAWAHNETSTGVAVPVRRP--EGSDDALVVIDATSGAG--GLPVDIAE 175 (361)
T ss_pred ecCC-CCCCCC-----ccC--------CCCCEEEEcccCCccceecccccc--cccCCCeEEEEcCcccc--CCCCCHHH
Confidence 7764 222222 233 689999999999999999999988 58899999999999999 56677664
Q ss_pred CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHH
Q 037063 335 FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKL 414 (588)
Q Consensus 335 ~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~ 414 (588)
+|++++|.||++|. |.|++++++++++++++.+...++ ..+... . ++.......+ +.+|++.+++..++
T Consensus 176 --~D~~~~s~~K~lg~-~~Gl~~~~~s~~~~~~~~~~~~~~-~~~p~~---~---d~~~~~~~~~-~~~t~~tp~i~~i~ 244 (361)
T TIGR01366 176 --TDVYYFAPQKNFAS-DGGLWLAIMSPAALERIEAIAASG-RWVPEF---L---SLPTAVDNSL-KNQTYNTPAIATLA 244 (361)
T ss_pred --CCEEEEEchhhcCC-CCceEEEEECHHHHhhhhcccCCC-CCCchh---h---hHHHHHhccc-cCCCCCCchHHHHH
Confidence 89999999999995 778999999999998888766542 211100 0 0100000123 45667766665568
Q ss_pred HHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc---cEEEEEeecCCCCCcCH
Q 037063 415 VECKGLDHADAL-GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG---PSLAFNVFDWNGTRIDP 490 (588)
Q Consensus 415 al~~aL~~l~~~-G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg---~iv~f~~~~~~g~~i~~ 490 (588)
++.++++++.++ |++.+.+|.+.+++++++.|.++ +.++++.+.. ..++ ++++|. . | +++
T Consensus 245 ~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~---------~~~~~~~~~~-~~~s~~v~~v~~~-~---g--~~~ 308 (361)
T TIGR01366 245 LLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQER---------PYATPFVTDP-GKRSQVVGTIDFV-D---D--IDA 308 (361)
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhC---------CCcccCCCCh-hhcccceEEEECC-C---c--cCH
Confidence 999999999999 69999999999999999999985 4456554321 1123 344442 2 2 678
Q ss_pred HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 491 ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 491 ~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
..+...|+++||.+..|... .+...||||++.|+|.+||++|+++|++.+++
T Consensus 309 ~~v~~~L~~~gI~i~~~~~~--------------------------l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 309 ATVAKILRANGIVDTEPYRK--------------------------LGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred HHHHHHHHHCCCeeccCccc--------------------------cCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 88888888889998654210 12228999999999999999999999997654
No 31
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.97 E-value=8e-29 Score=265.16 Aligned_cols=355 Identities=11% Similarity=0.000 Sum_probs=250.6
Q ss_pred CeeeecCCC--------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 111 NYVCFDYIG--------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 111 ~~vyLD~a~--------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+|||+++ +++..+.+.+.+...+.. .++||+|. +.. .++++
T Consensus 33 ~~iyld~~a~~~~~~~~tt~~~p~~~~~~~~~l~~-~~~np~s~---------------------------~~~-~~le~ 83 (431)
T TIGR01788 33 DELSLDGNPRLNLATFVTTWMEPEARKLMDETINK-NMIDKDEY---------------------------PQT-AEIEN 83 (431)
T ss_pred HHhhhcCCcceeeeeeeCCCCCHHHHHHHHHHHhc-CCCCcccC---------------------------ccH-HHHHH
Confidence 356777777 777777788877666532 35666321 222 48999
Q ss_pred HHHHHHHHHhCCC-C-CCceEEE--ecCHHHHHHHHHHhCCC-------CCC-----CeEE-EcCCCchhHHHHHHHHHH
Q 037063 183 KIRKRIMDFMNIS-E-DDYTLVF--TANQSSAFKLLAESYPF-------YSN-----PRLL-TVYDHENEAAALMIESSK 245 (588)
Q Consensus 183 ~~r~~ia~~lga~-~-~e~~vvf--t~g~T~al~lv~~s~~~-------~~g-----d~ll-~~~e~~s~~~~~~~~~a~ 245 (588)
++|+.+++++|++ + ++ ++| |+|+|+|+++++.+... +.| .+|+ +..+|++ | .+.++
T Consensus 84 ~~~~~la~llg~~~~~~~--~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~s----v-~ka~~ 156 (431)
T TIGR01788 84 RCVNMLADLWHAPAKDAE--AVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVC----W-EKFAR 156 (431)
T ss_pred HHHHHHHHHhCCCCCCCC--CeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHH----H-HHHHH
Confidence 9999999999997 3 34 555 89999999987755421 111 2444 5666764 2 45667
Q ss_pred hcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc------CcEEEEe
Q 037063 246 KRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK------GWHVLLD 318 (588)
Q Consensus 246 ~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~------g~~vvvD 318 (588)
..|++++.+|++...+.+|+++|+++|+ ++|.+|++++++|.||.+.|+++| ++|+++ |++++||
T Consensus 157 ~lg~~v~~i~~d~~~~~vd~~~L~~~i~--------~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvD 228 (431)
T TIGR01788 157 YFDVELREVPMDPGRYVIDPEQVVEAVD--------ENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVD 228 (431)
T ss_pred HcCceeEEEecCCCceeeCHHHHHHHHh--------hCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEe
Confidence 7899999999983235899999999998 679999999999999999999999 999999 9999999
Q ss_pred CCCcCC---CCC--CCCCCCCCCCcEEEeccCccC-CCCCCceEEEEEeCcc--hhccc--CCCCCCCceEeeecCCCcc
Q 037063 319 ATALGS---KDM--DTLGLSLFKPDFLICSFYKIF-GENPSGFGCLFVKKSS--ASVLS--GSTSSVSTIMGIEPSFSEI 388 (588)
Q Consensus 319 aa~~~~---~d~--~~l~l~~~~~D~vv~S~~K~~-G~~P~G~G~L~v~~~~--~~~l~--~~~~g~~g~v~~~~~~~~~ 388 (588)
++|.++ .+. .++++...++|.+++|+|||+ | |.|+|+|++|++. .+.+. +.+.++ +..+.
T Consensus 229 aaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~--P~g~G~l~~r~~~~l~~~~~~~~~yl~~-~~~~~------- 298 (431)
T TIGR01788 229 AASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLV--YPGVGWVIWRDEEALPEELIFHVNYLGG-DEPTF------- 298 (431)
T ss_pred cccHHHHHHHhCCCchhhcCCCCceEEEECchhccCC--CCCcEEEEEeChHHcchhheecccccCC-CCCCc-------
Confidence 998842 111 234445567999999999976 6 9999999999862 12221 112221 11000
Q ss_pred cccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCC
Q 037063 389 IELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKV 468 (588)
Q Consensus 389 ~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~ 468 (588)
. -.|+.+.... .++...|..+-..|++++.++...|++++.++|.++ +.+++++|.
T Consensus 299 -t----------~~~sR~g~~a---l~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~---------~~~el~~~~- 354 (431)
T TIGR01788 299 -T----------LNFSRPANQV---IAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKL---------GPFEIISDG- 354 (431)
T ss_pred -c----------eecCchHHHH---HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhC---------CCEEEeeCC-
Confidence 0 0111111111 233455666666789999999999999999999984 679999762
Q ss_pred CCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCC
Q 037063 469 MFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGC 548 (588)
Q Consensus 469 ~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~ 548 (588)
.+.++|+|++.+.+...++..++.+.|.+.||.+..- .+ | . ...|..++|+++-.
T Consensus 355 --~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~-~~-p---------------~------~~~~~~~lR~~~~~ 409 (431)
T TIGR01788 355 --SGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAY-TL-P---------------K------NAEDIVVMRIVVRE 409 (431)
T ss_pred --CCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCC-CC-C---------------C------ccCCeEEEEEEecC
Confidence 3679999999753323356778888888999865321 00 0 0 01344589999988
Q ss_pred CCCHHHHHHHHHHHHHhhhh
Q 037063 549 LTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 549 ~~t~eDv~~li~~l~~~l~~ 568 (588)
..+.+.+++|++.|...+..
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~ 429 (431)
T TIGR01788 410 GFSRDLAELLIEDIEAALAY 429 (431)
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 88999999999999987654
No 32
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.97 E-value=1.2e-28 Score=261.31 Aligned_cols=323 Identities=13% Similarity=0.057 Sum_probs=238.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.+.++++|+.+++++|++++...|++|+|+|+++.+++.++ +.+|++++ ....++. ..+ ...++..|++++.++.
T Consensus 36 ~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l-~~~~~~vlv~~~~~~~--~~~-~~~~~~~g~~~~~i~~ 111 (368)
T PRK13479 36 NALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSL-VPRDGKVLVPDNGAYG--ARI-AQIAEYLGIAHVVLDT 111 (368)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhc-cCCCCeEEEEeCCchH--HHH-HHHHHHcCCcEEEEEC
Confidence 35789999999999999765456889999999999999999 67888854 4433332 122 4677889999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ .++.+++++++++++. .+++++|.+++++|+||.+.|+++| ++|+++|+++++|+++.++ ..++++..+
T Consensus 112 ~-~~~~~d~~~l~~~l~~------~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g--~~~~~~~~~ 182 (368)
T PRK13479 112 G-EDEPPDAAEVEAALAA------DPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFG--AIPIDIAEL 182 (368)
T ss_pred C-CCCCCCHHHHHHHHHh------CCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccC--Ccccccccc
Confidence 7 4567999999999872 1457899999999999999999999 9999999999999998776 345666666
Q ss_pred CCcEEEeccCccC-CCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc-cccccccCCCCCccchhhH
Q 037063 336 KPDFLICSFYKIF-GENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL-DESSQSKFPESSISGVSSK 413 (588)
Q Consensus 336 ~~D~vv~S~~K~~-G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~-~~~~f~e~GT~~~~~~~~~ 413 (588)
++|++++|+||++ | |.|+|+++++++.++.+...... ...+... ......+ ...+| |++...+
T Consensus 183 ~~d~~v~s~~K~l~g--~~G~G~l~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~----t~~~~~~--- 247 (368)
T PRK13479 183 GIDALISSANKCIEG--VPGFGFVIARRSELEACKGNSRS--LSLDLYD----QWAYMEKTGQWRF----TPPTHVV--- 247 (368)
T ss_pred CceEEEecCcccccc--CCCceEEEECHHHHHHhhcCCCC--eeecHHH----HHhhhcccCCCCC----CCcHHHH---
Confidence 7999999999965 6 88999999999988776643321 1111000 0000000 01123 6666554
Q ss_pred HHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHH
Q 037063 414 LVECKGLDHADAL-GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 414 ~al~~aL~~l~~~-G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~ 492 (588)
+++.++++.+.+. +++++.+++..+++++++.|.++ +++++.+.. .....+++|.+.... .++...
T Consensus 248 ~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~ 314 (368)
T PRK13479 248 AAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL----------GFEPLLDAE-IQSPIIVTFHAPADP--AYDFKE 314 (368)
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc----------CCcccCCch-hcCceEEEEECCCCC--CcCHHH
Confidence 7888999987555 58899999999999999999885 344554322 112245667655421 145677
Q ss_pred HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 493 VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 493 v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+.+.|.++||.++.|... ....+|+|.+.+++.||+++++++|++++++
T Consensus 315 l~~~L~~~gi~v~~g~~~---------------------------~~~~iRis~~~~~t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 315 FYERLKEQGFVIYPGKLT---------------------------QVDTFRIGCIGDVDAADIRRLVAAIAEALYW 363 (368)
T ss_pred HHHHHHHCCEEEecCCCC---------------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 888888889999876321 0127999987789999999999999998865
No 33
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.97 E-value=1.1e-28 Score=268.03 Aligned_cols=347 Identities=12% Similarity=0.041 Sum_probs=245.3
Q ss_pred CCCCCCCHHHHHHhhhhcccCc-CCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH-HHHHHHHHHhCCC
Q 037063 118 IGHGLFSYSQMHSCSSNVHSSA-ASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES-KIRKRIMDFMNIS 195 (588)
Q Consensus 118 a~~gl~~~~~~~~~~~~~~~~~-~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~-~~r~~ia~~lga~ 195 (588)
++-..+|+.+++.+...+.... .+||+| ....|.+..+.++ .+|++++++||++
T Consensus 41 ~sen~~s~~v~~~~~~~l~~~y~~g~p~s------------------------~~~~g~~~~~~iE~~ar~~~a~lf~a~ 96 (452)
T PTZ00094 41 ASENFTSRAVLECLGSCFTNKYAEGLPGN------------------------RYYGGNEVVDKIENLCQKRALEAFGLD 96 (452)
T ss_pred cccccCCHHHHHHhcchhhccccCCCCCc------------------------cccccchHHHHHHHHHHHHHHHHhCCC
Confidence 7788999999999876664322 266632 1122333345555 5999999999998
Q ss_pred CCCceEEEe---cCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHH------hcCCEEEEEeccCCCCccCH
Q 037063 196 EDDYTLVFT---ANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSK------KRGARVSSAEFAWPNLRIHS 265 (588)
Q Consensus 196 ~~e~~vvft---~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~------~~G~~v~~v~~~~~~~~i~~ 265 (588)
+++ ++|+ +++|+|+.+++.++ +++||+|+ +..+|.+....| ....+ ..+.++..++++ .++.+|.
T Consensus 97 ~~~--~~~~~~~~sgt~an~~v~~al-~~~gd~Ii~~~~ehg~~l~~~-~~l~~~~~~~~~~~~~~~~~~~~-~~g~id~ 171 (452)
T PTZ00094 97 PEE--WGVNVQPYSGSPANFAVYTAL-LQPHDRIMGLDLPSGGHLTHG-FYTAKKKVSATSIYFESLPYQVN-EKGLIDY 171 (452)
T ss_pred ccc--ceeecCCCchHHHHHHHHHHh-cCCCCEEEecccccCCccccc-ccccccccccceeeeeeeecccC-CCCCcCH
Confidence 765 7777 78999999999999 89999966 567776533323 11111 112344455566 4689999
Q ss_pred HHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC---CCCCCCCCCCCCcEEE
Q 037063 266 GKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK---DMDTLGLSLFKPDFLI 341 (588)
Q Consensus 266 e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~---d~~~l~l~~~~~D~vv 341 (588)
++|++++.. .++++|++. . +.+|...|+++| ++|+++|++++||++|.+|. ++.+.++ .++|+++
T Consensus 172 ~~L~~~l~~-------~~~~lvi~~-~-s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~--~~~D~l~ 240 (452)
T PTZ00094 172 DKLEELAKA-------FRPKLIIAG-A-SAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPF--PYADVVT 240 (452)
T ss_pred HHHHHHHHH-------hCCCEEEEe-C-CCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCC--CCCcEEE
Confidence 999999962 356777764 3 459999999999 99999999999999999972 2222222 2599999
Q ss_pred eccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHH
Q 037063 342 CSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLD 421 (588)
Q Consensus 342 ~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~ 421 (588)
+|+||+++. |.| |+++++++..+.+.+.... . .+ +.| .|+++...+ +++.++++
T Consensus 241 ~S~hK~l~G-P~G-g~l~~~~~~~~~l~~~~~~---~-----------~~-----p~~--~G~~~~~~i---aal~~al~ 294 (452)
T PTZ00094 241 TTTHKSLRG-PRS-GLIFYRKKVKPDIENKINE---A-----------VF-----PGL--QGGPHNHQI---AAIAVQLK 294 (452)
T ss_pred cCCccCCCC-CCc-eEEEEecccchHHHHhhcc---c-----------cC-----CCC--CCCchHHHH---HHHHHHHH
Confidence 999996642 888 8888888765444322110 0 00 022 366666665 88899999
Q ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCC
Q 037063 422 HADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHN 501 (588)
Q Consensus 422 ~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~g 501 (588)
++...+.+.+.+++..++++|.+.|.+. +++++++... .+..++.|...+ ++...+..+|+++|
T Consensus 295 ~~~~~~~~~~~~~i~~l~~~l~~~L~~~----------g~~v~~~~~~-~~~~~v~~~~~~-----~~~~~~~~~L~~~g 358 (452)
T PTZ00094 295 EVQSPEWKEYAKQVLKNAKALAAALEKR----------GYDLVTGGTD-NHLVLVDLRPFG-----ITGSKMEKLLDAVN 358 (452)
T ss_pred HHhChhHHHHHHHHHHHHHHHHHHHHhC----------CcEEecCCCC-CceEeecCCcCC-----CCHHHHHHHHHHCC
Confidence 9987788999999999999999999873 4566654321 233455555444 56788899999999
Q ss_pred cEe-ccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCC----HHHHHHHHHHHHHhhhh
Q 037063 502 ISL-SCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTN----FEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 502 I~v-~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t----~eDv~~li~~l~~~l~~ 568 (588)
|.+ +.|..|.+. ....+.||+|++++|| ++||++++++|++.++.
T Consensus 359 I~vs~~~~p~~~~----------------------~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 359 ISVNKNTIPGDKS----------------------ALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred cEEecccCCCCCc----------------------CCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999 556555310 0111389999999998 99999999999999885
No 34
>PRK02769 histidine decarboxylase; Provisional
Probab=99.97 E-value=4.2e-28 Score=256.21 Aligned_cols=343 Identities=14% Similarity=0.099 Sum_probs=251.2
Q ss_pred CCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHH
Q 037063 107 LSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRK 186 (588)
Q Consensus 107 l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~ 186 (588)
++.....|+-|....-++.+.++.+...... ..+||.|.+ .+|....++++++++
T Consensus 18 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~-n~gnp~~~~------------------------~~g~~~~~~e~~~~~ 72 (380)
T PRK02769 18 LRHNQYFNVGYPEAADFDYSALKRFFSFSIN-NCGDPYSKS------------------------NYPLNSFDFERDVMN 72 (380)
T ss_pred HHHhhhcccCCCchhhcCHHHHHHHHHhhhc-cCCCccccC------------------------CCCCChHHHHHHHHH
Confidence 4334556777777887877788877666544 357774321 123344789999999
Q ss_pred HHHHHhCCCCCCceEEEecCHHHHHHHHHHhC-CCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccC
Q 037063 187 RIMDFMNISEDDYTLVFTANQSSAFKLLAESY-PFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIH 264 (588)
Q Consensus 187 ~ia~~lga~~~e~~vvft~g~T~al~lv~~s~-~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~ 264 (588)
.+++++|+++++...+||+|+|+++.+.+... .+.++++|+ +..+|+| + .+.++..|.+++.|+.+ +++++|
T Consensus 73 ~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~S--v---~ka~~~lg~~~~~V~~~-~~g~id 146 (380)
T PRK02769 73 FFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYS--V---SKIARLLRIKSRVITSL-PNGEID 146 (380)
T ss_pred HHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceeh--H---HHHHHHcCCCCceeccC-CCCcCc
Confidence 99999999866534699999999966554332 245677855 6678886 2 24456678888888887 789999
Q ss_pred HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcC---cEEEEeCCCcCCCC-----CCCCCCCCC
Q 037063 265 SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKG---WHVLLDATALGSKD-----MDTLGLSLF 335 (588)
Q Consensus 265 ~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g---~~vvvDaa~~~~~d-----~~~l~l~~~ 335 (588)
.++|+++|+. . ..+|.+|++++.+|++|.+.|+++| ++|+++| ++++||||+.++.- ..++++..
T Consensus 147 ~~~L~~~i~~----~-~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~- 220 (380)
T PRK02769 147 YDDLISKIKE----N-KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFAD- 220 (380)
T ss_pred HHHHHHHHHh----C-CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccC-
Confidence 9999999982 1 2459999999999999999999999 9999998 69999999888521 11456555
Q ss_pred CCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHH
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLV 415 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~a 415 (588)
++|++++|+|||+|. |.|+|+|++|++..+.+.+.. ..+. .. . .. ..||.+...+ ++
T Consensus 221 ~vDsis~s~HK~~~~-P~g~G~l~~r~~~~~~~~~~~----~yl~------------~~-d-~t-~~GSR~g~~~---l~ 277 (380)
T PRK02769 221 GIDSIAISGHKFIGS-PMPCGIVLAKKKYVERISVDV----DYIG------------SR-D-QT-ISGSRNGHTA---LL 277 (380)
T ss_pred CCCEEEECCcccCCC-CCCcEEEEEehhhhhhcccCc----cccC------------CC-C-CC-ccCCCCcHHH---HH
Confidence 799999999998886 999999999998766554311 1100 00 0 11 4788887765 68
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHH
Q 037063 416 ECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQK 495 (588)
Q Consensus 416 l~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~ 495 (588)
+..+|+++...|++++.+++.++++++.++|+++ +++++.. +...+|+|..++ .. +
T Consensus 278 lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~----------g~~~~~~----p~~~~v~f~~~~-------~~-~-- 333 (380)
T PRK02769 278 LWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN----------GIPAWRN----PNSITVVFPCPS-------ER-I-- 333 (380)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC----------CCEEEcC----CCceEEEEcCCC-------HH-H--
Confidence 8899999999999999999999999999999874 4555553 346788886543 11 1
Q ss_pred HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 496 LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 496 ~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
. +|..+.+- .+ .+|+.+-...+.|.|+.|++.|...+.
T Consensus 334 -~--~~w~l~~~-----------------------------~~--~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 334 -W--KKWHLATS-----------------------------GN--QAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred -H--hCeeEccc-----------------------------CC--EEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 1 45554321 11 788888888899999999999877543
No 35
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.96 E-value=1.9e-27 Score=250.35 Aligned_cols=322 Identities=14% Similarity=0.120 Sum_probs=235.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCe-EEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPR-LLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~-ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++++++|+.+++++|+++++..|++++|+|+++.+++.++ +.++++ |+....++... +...++..|++++.++.
T Consensus 30 ~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~-~~~~~~vi~~~~~~~~~~---~~~~a~~~g~~~~~i~~ 105 (355)
T TIGR03301 30 NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSL-VPRDGKLLVLINGAYGER---LAKICEYLGIPHTDLNF 105 (355)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhc-cCCCCeEEEECCCchhhH---HHHHHHHcCCceEEEec
Confidence 47789999999999999865446889999999999999998 677777 44544443311 24566788999999998
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ .++.++.+++++.+++ +++++++++++++|+||.+.|+++| ++|+++|+++++|+++..+ ..++++..+
T Consensus 106 ~-~~~~~d~~~l~~~l~~------~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g--~~~~~~~~~ 176 (355)
T TIGR03301 106 S-EYEPPDLNRIEEALAA------DPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFG--AIPIDIEEL 176 (355)
T ss_pred C-CCCCCCHHHHHHHHHh------CCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccC--Ccccchhhc
Confidence 7 4567999999999972 1457789999999999999999999 9999999999999998776 234555566
Q ss_pred CCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHH
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLV 415 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~a 415 (588)
++|++++|+||+++. |.|+|++++++++++.+...... ...+... +...+... .. ..+|++...+ .+
T Consensus 177 ~~d~~~~s~~K~l~~-~~G~g~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~---~~-~~~t~~~~~~---~a 243 (355)
T TIGR03301 177 DVDALIASANKCLEG-VPGFGFVIARRDLLEASAGNARS--LYLDLYD---QWAYMEKT---GK-WRFTPPTHTV---YA 243 (355)
T ss_pred CccEEEecCCccccc-CCceeEEEECHHHHHHhhCCCCC--ceeeHHH---HHHHhhhc---CC-CCCCCcHHHH---HH
Confidence 799999999997642 78999999999988776532111 0000000 00000000 00 2335665554 67
Q ss_pred HHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc-EEEEEeecCCCCCcCHHHH
Q 037063 416 ECKGLDHADALG-LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP-SLAFNVFDWNGTRIDPALV 493 (588)
Q Consensus 416 l~~aL~~l~~~G-~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~-iv~f~~~~~~g~~i~~~~v 493 (588)
+..+++.+.+.| ++++.++.+.+++++.+.|.++ +++++.+.. .+++ ++.|.++... ..+...+
T Consensus 244 ~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~----------g~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~ 309 (355)
T TIGR03301 244 FAQALEELEAEGGVPARIARYRRNRELLVDGLRAL----------GFQPLLPER--WQSPIIVSFLYPDDP--DFDFDDF 309 (355)
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc----------CCeeecCCC--CCCCcEEEEECCCCC--cchHHHH
Confidence 788999887776 8999999999999999999875 345555432 2344 4566665311 1345678
Q ss_pred HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 494 QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 494 ~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
.+.|.++||.++.|... . .++||+|++.+++.+|++++++.|+++|
T Consensus 310 ~~~l~~~gi~i~~~~~~--------------------------~-~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 310 YQELKERGFVIYPGKLT--------------------------L-ADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred HHHHHHCCEEEECCccc--------------------------c-ccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 88888899999876321 0 1389999999999999999999998754
No 36
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.96 E-value=4e-27 Score=249.66 Aligned_cols=299 Identities=14% Similarity=0.047 Sum_probs=224.4
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhC---CCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEE
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESY---PFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSS 253 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~---~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~ 253 (588)
.++++++++.+++++|++++. ++||+|+|+++.+++.++ .++++++|++ ..+|++ | .+.++..|++++.
T Consensus 58 ~~~~~~~~~~la~~~g~~~~~--~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s----~-~~~~~~~g~~~~~ 130 (371)
T PRK13520 58 AKLEEEAVEMLGELLHLPDAY--GYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFS----F-DKAADMLGVELRR 130 (371)
T ss_pred HHHHHHHHHHHHHHhCCCCCC--eEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHH----H-HHHHHHcCceEEE
Confidence 566789999999999997543 899999999988876654 2345778664 455543 2 4566778999999
Q ss_pred EeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC---CC--
Q 037063 254 AEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK---DM-- 327 (588)
Q Consensus 254 v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~---d~-- 327 (588)
++.+ .++.+++++|+++|+ +++++|++.+.+|+||.+.|+++| ++|+++|++++||+++.... ..
T Consensus 131 v~~~-~~~~~d~~~l~~~i~--------~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~ 201 (371)
T PRK13520 131 APLD-DDYRVDVKAVEDLID--------DNTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDP 201 (371)
T ss_pred ecCC-CCCcCCHHHHHHHHh--------hCCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCC
Confidence 9987 567899999999998 568888888889999999999999 99999999999999986431 11
Q ss_pred CCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCc-chhcccC---CCCCCCceEeeecCCCcccccccccccccccCC
Q 037063 328 DTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKS-SASVLSG---STSSVSTIMGIEPSFSEIIELETLDESSQSKFP 403 (588)
Q Consensus 328 ~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~-~~~~l~~---~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G 403 (588)
..+++...++|++++|+||+.+. |.|+|+++++++ .++.+.. ...++ + .+...|
T Consensus 202 ~~~~~~~~~vd~~~~s~~K~~~a-~~~~G~~~~~~~~~~~~l~~~~~~~~~~-~--------------------~~~~~g 259 (371)
T PRK13520 202 PNFDFSLPGVDSITIDPHKMGLA-PIPAGGILFRDESYLDALAVDTPYLTSK-K--------------------QATLTG 259 (371)
T ss_pred CCccccCCCCceEEECCccccCc-cCCceEEEEcCHHHHHhhcccCccccCC-C--------------------CcceEe
Confidence 12444445699999999997653 778898887664 5554431 11110 0 121456
Q ss_pred CCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecC
Q 037063 404 ESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDW 483 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~ 483 (588)
|++...+ +++..+|+.+...|++++.++..++++++.+.|.++ +++++.+ ...++++|.+.+
T Consensus 260 t~~~~~~---~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~----~~~~~v~~~~~~- 321 (371)
T PRK13520 260 TRSGAGV---AATYAVMKYLGREGYRKVVERCMENTRWLAEELKER----------GFEPVIE----PVLNIVAFDDPN- 321 (371)
T ss_pred eccChHH---HHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC----------CCEEecC----CCceEEEEecCC-
Confidence 7766654 677789988877788999999999999999999884 3443222 235678777653
Q ss_pred CCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 484 NGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 484 ~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
...+.+.|.++||.++.+ .+..+||+|++.++|.|||+++++.|+
T Consensus 322 ------~~~v~~~L~~~gi~v~~~-----------------------------~~~~~iRis~~~~~t~edi~~~~~~l~ 366 (371)
T PRK13520 322 ------PDEVREKLRERGWRVSVT-----------------------------RCPEALRIVCMPHVTREHIENFLEDLK 366 (371)
T ss_pred ------HHHHHHHHHHCCceeccC-----------------------------CCCCEEEEEEECCCCHHHHHHHHHHHH
Confidence 667788888889988752 111289999999999999999999999
Q ss_pred Hhhh
Q 037063 564 RFLD 567 (588)
Q Consensus 564 ~~l~ 567 (588)
++++
T Consensus 367 ~~~~ 370 (371)
T PRK13520 367 EVKK 370 (371)
T ss_pred HHhh
Confidence 8764
No 37
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=6.2e-27 Score=241.86 Aligned_cols=327 Identities=15% Similarity=0.146 Sum_probs=252.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.+++.++++.+..+|+++ +.+.+++++++|.|+...+.++ ++|||+|| .....+. .++.+++++.|++++.+..
T Consensus 37 ~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl-~~pgdkVLv~~nG~FG---~R~~~ia~~~g~~v~~~~~ 111 (383)
T COG0075 37 VGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASL-VEPGDKVLVVVNGKFG---ERFAEIAERYGAEVVVLEV 111 (383)
T ss_pred HHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhc-cCCCCeEEEEeCChHH---HHHHHHHHHhCCceEEEeC
Confidence 578889999999999997 3356888899999999999999 99999955 5555543 3448999999999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+|. ..+++++++++|++ .+..++|++.|+.+.||++.|+++| ++|+++|.++|||+.++++ ..++++++|
T Consensus 112 ~wg-~~v~p~~v~~~L~~------~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~G--g~~~~vd~w 182 (383)
T COG0075 112 EWG-EAVDPEEVEEALDK------DPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLG--GEPLKVDEW 182 (383)
T ss_pred CCC-CCCCHHHHHHHHhc------CCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCC--Ccccchhhc
Confidence 864 46999999999982 2678999999999999999999999 9999999999999999988 577888888
Q ss_pred CCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHH
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLV 415 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~a 415 (588)
++|+++++.+|.++. |.|+|++.++++.++.+......+ ...++... ..++..... ...|+++..+ .+
T Consensus 183 giDv~itgSQK~l~~-PPGla~v~~S~~a~e~~~~~~~~~-~ylDL~~~---~~~~~~~~~----~p~Tppv~~i---~a 250 (383)
T COG0075 183 GIDVAITGSQKALGA-PPGLAFVAVSERALEAIEERKHPS-FYLDLKKW---LKYMEKKGS----TPYTPPVNLI---YA 250 (383)
T ss_pred CccEEEecCchhccC-CCccceeEECHHHHHHHhcCCCCc-eeecHHHH---HHHHhhcCC----CCCCCCHHHH---HH
Confidence 899999999998886 899999999999988776433211 12111100 000100000 2346766665 89
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc-EEEEEeecCCCCCcCHH-HH
Q 037063 416 ECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP-SLAFNVFDWNGTRIDPA-LV 493 (588)
Q Consensus 416 l~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~-iv~f~~~~~~g~~i~~~-~v 493 (588)
+..+|+.+.+.|++++.+|.+.+++++++++..| +++++.. . ..+++ +.++.++. | ++.. ..
T Consensus 251 L~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al----------Gl~~~~~-~-~~~s~tvta~~~P~--g--~~~~~~~ 314 (383)
T COG0075 251 LREALDLILEEGLEARIARHRRLAEALRAGLEAL----------GLELFAD-P-ERRSPTVTAIKVPE--G--VDDKKVR 314 (383)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc----------CCccccC-c-ccCCCceEEEECCC--C--CCcHHHH
Confidence 9999999999999999999999999999999997 4566662 2 24454 55566554 2 4433 33
Q ss_pred HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhhhcc
Q 037063 494 QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDADFVE 572 (588)
Q Consensus 494 ~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~~~~ 572 (588)
..+++++||.+..|.-- ..-..+||+.--+-+.+||...+.+|...|.+.-++
T Consensus 315 ~~~~~~~g~~i~gg~~~--------------------------l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~~ 367 (383)
T COG0075 315 RALLKEYGVEIAGGQGP--------------------------LKGKIFRIGHMGNVRPEDVLAALAALEAALRELGVK 367 (383)
T ss_pred HHHHHhCCEEecccccc--------------------------cCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCCc
Confidence 45778889999877211 111289999855889999999999999988776443
No 38
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.96 E-value=1e-25 Score=239.25 Aligned_cols=297 Identities=13% Similarity=0.046 Sum_probs=217.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-----CCCCCeEEEcC-CCchhHHHHHHHHHHhcCCEE
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-----FYSNPRLLTVY-DHENEAAALMIESSKKRGARV 251 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-----~~~gd~ll~~~-e~~s~~~~~~~~~a~~~G~~v 251 (588)
.++++++|+.+++++|+++++ +++++|+|+++.+++.++. -++|++|++.. +|++ + ...++..|+++
T Consensus 58 ~~~~~~~~~~la~~~g~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~----~-~~~~~~~G~~~ 130 (373)
T TIGR03812 58 KKIEEEVVGSLGNLLHLPDAY--GYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFS----F-EKAAEMLGLEL 130 (373)
T ss_pred HHHHHHHHHHHHHHhCCCCCC--eEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHH----H-HHHHHHcCCeE
Confidence 567789999999999997554 8889999999887765541 14678877554 4432 2 45667889999
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC-----
Q 037063 252 SSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK----- 325 (588)
Q Consensus 252 ~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~----- 325 (588)
+.++.+ +++.+++++|+++++ +++..+++.+++|+||.+.|+++| ++|+++|++++||+++....
T Consensus 131 ~~v~~~-~~~~~d~~~l~~~l~--------~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~ 201 (373)
T TIGR03812 131 RYAPLD-EDYTVDVKDVEDLID--------DNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLK 201 (373)
T ss_pred EEEeeC-CCCCcCHHHHHHHHh--------hCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHh
Confidence 999997 678899999999997 455444444578999999999999 99999999999999976431
Q ss_pred ---CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEE-eCcchhcccCC--CCCCCceEeeecCCCccccccccccccc
Q 037063 326 ---DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFV-KKSSASVLSGS--TSSVSTIMGIEPSFSEIIELETLDESSQ 399 (588)
Q Consensus 326 ---d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v-~~~~~~~l~~~--~~g~~g~v~~~~~~~~~~~~~~~~~~~f 399 (588)
....+++....+|++++|+||+.. +|.|+|++++ +++.++.+... +... + ..+
T Consensus 202 ~~~~~~~~d~~~~~~d~~~~s~~K~~~-~~~~~G~~~~~~~~~~~~l~~~~~~~~~-~-------------------~~~ 260 (373)
T TIGR03812 202 KGYNPPPFDFSLPGVQSITIDPHKMGL-SPIPAGGILFRSKSYLKYLSVDAPYLTV-K-------------------KQA 260 (373)
T ss_pred cCCCCCCccccCCCCCEEEECccccCC-CcCCceEEEEeCHHHHhhhcccCcccCC-C-------------------CCc
Confidence 011344444458999999999543 2777776665 55565555311 1000 0 012
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEE
Q 037063 400 SKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFN 479 (588)
Q Consensus 400 ~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~ 479 (588)
...||++...+ +++..+|+.+.+.|++++.+|+.+++++++++|+++ +...++. ...+++.|.
T Consensus 261 ~~~gt~~~~~~---~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~---------g~~~~~~-----~~~~~v~~~ 323 (373)
T TIGR03812 261 TITGTRSGASA---AATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI---------GFEPVIE-----PVLNIVAFE 323 (373)
T ss_pred ceEeechhHHH---HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC---------CCeEEcC-----CCceEEEEE
Confidence 14578877765 677789998888889999999999999999999986 2223333 235788887
Q ss_pred eecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHH
Q 037063 480 VFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLW 559 (588)
Q Consensus 480 ~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li 559 (588)
+.+ ...+.+.|.++||.++.+ .+..+||+|++.++|.+|+++++
T Consensus 324 ~~~-------~~~v~~~L~~~gi~v~~~-----------------------------~~~~~iRis~~~~~t~edid~l~ 367 (373)
T TIGR03812 324 VDD-------PEEVRKKLRDRGWYVSVT-----------------------------RCPKALRIVVMPHVTREHIEEFL 367 (373)
T ss_pred eCC-------HHHHHHHHHHCCceeccC-----------------------------CCCCEEEEEEECCCCHHHHHHHH
Confidence 654 346777777789998643 11128999999999999999999
Q ss_pred HHHHH
Q 037063 560 AFVSR 564 (588)
Q Consensus 560 ~~l~~ 564 (588)
+.|++
T Consensus 368 ~~L~~ 372 (373)
T TIGR03812 368 EDLKE 372 (373)
T ss_pred HHHhh
Confidence 99875
No 39
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.95 E-value=4.8e-25 Score=235.31 Aligned_cols=351 Identities=11% Similarity=0.071 Sum_probs=238.0
Q ss_pred eeecC-CCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHH
Q 037063 113 VCFDY-IGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDF 191 (588)
Q Consensus 113 vyLD~-a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~ 191 (588)
+.||- .-.|++++.+++++.++.. .++||+|. + +. . +......++++|+.+|++
T Consensus 21 ~~~~~~~~~~p~~~~~~~a~~~~~~--~~~~~~~~-~-------------------~~-~--~~~~~~~~~~l~~~lA~~ 75 (387)
T PRK09331 21 INLDPIQRGGILTPEARKALIEYGD--GYSVCDYC-P-------------------GR-L--DQIKKPPIADFHEDLAEF 75 (387)
T ss_pred cccChhhcCCCCCHHHHHHHHHHHh--ccCCCccc-c-------------------cc-c--ccccChHHHHHHHHHHHH
Confidence 34443 3568999999999977762 34565220 0 10 0 111245689999999999
Q ss_pred hCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEec--cCCCCccCHHHH
Q 037063 192 MNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEF--AWPNLRIHSGKL 268 (588)
Q Consensus 192 lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~--~~~~~~i~~e~l 268 (588)
+|++ + ++||+|+|+|+.+++.++ +++||+|++. .+|.+ .+ ..++..|++++.++. + +++.++++++
T Consensus 76 ~g~~--~--~~~~~g~t~a~~~al~~l-~~~gd~Vlv~~~~h~s-~~----~~~~~~G~~~~~v~~~~~-~~~~~d~~~l 144 (387)
T PRK09331 76 LGMD--E--ARVTHGAREGKFAVMHSL-CKKGDYVVLDGLAHYT-SY----VAAERAGLNVREVPKTGY-PEYKITPEAY 144 (387)
T ss_pred hCCC--c--EEEeCCHHHHHHHHHHHh-cCCCCEEEECCCchHH-HH----HHHHHcCCEEEEEeCccC-cCCCcCHHHH
Confidence 9994 2 789999999999999999 8999997654 45554 22 235678999999998 4 5677999999
Q ss_pred HHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCcc
Q 037063 269 MKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKI 347 (588)
Q Consensus 269 ~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~ 347 (588)
++.|+.. .+...+++++|++++++|++|.+.|+++| ++|+++|+++++|+++..+ ..+++...+++|++++|+||+
T Consensus 145 ~~~l~~~-~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g--~~~~~~~~~g~D~~~~s~~K~ 221 (387)
T PRK09331 145 AEKIEEV-KEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVG--RMPVDGKKLGADFIVGSGHKS 221 (387)
T ss_pred HHHHHHh-hhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccC--CcCCCHHHcCCCEEEeeCccc
Confidence 9999720 00112478999999999999999999999 9999999999999999886 233444445599999999998
Q ss_pred CCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhC
Q 037063 348 FGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALG 427 (588)
Q Consensus 348 ~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G 427 (588)
++. |.|+|+++++++.++.+......- .... . .+ ..++...... +++..+++.+.+.
T Consensus 222 l~~-~~~~G~l~~~~~~i~~~~~~~~~~-~~~~----------~------~~-~~~~~~~~~~---~~~~aal~~~~~~- 278 (387)
T PRK09331 222 MAA-SAPSGVLATTEEYADKVFRTSRKF-GVKE----------V------EL-LGCTLRGAPL---VTLMASFPHVVER- 278 (387)
T ss_pred ccC-CCCEEEEEECHHHHhhcccccCCC-cccc----------e------ee-eceecCchHH---HHHHHHHHHHHHH-
Confidence 874 789999999998877654322110 0000 0 00 1122222222 4445667665543
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecC----CCCCcCHHHHHHHHHhCCcE
Q 037063 428 LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDW----NGTRIDPALVQKLADRHNIS 503 (588)
Q Consensus 428 ~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~----~g~~i~~~~v~~~l~~~gI~ 503 (588)
+ ...++...+++++++.|.++ ++++++++.. ...+++.+..+.. .+.......+.+.|.++||.
T Consensus 279 ~-~~~~~~~~~~~~l~~~L~~l---------~g~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~ 346 (387)
T PRK09331 279 V-KRWDEEVKKARWFVDELEKI---------EGFKQLGEKP--RNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIH 346 (387)
T ss_pred H-HHHHHHHHHHHHHHHHHhcC---------CCEEEeccCc--CcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCce
Confidence 2 34455567888999999885 6788886422 2356776654421 11112334577777888996
Q ss_pred eccccccCcccccchHHHHHHHHhhhcCCCCCcCCcc-EEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 504 LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVS-VVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 504 v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~-~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.-. .+.+ .+|+.. ...+.+|+++++++|++++++
T Consensus 347 ~~~------------------------------~~~~~i~ri~~-~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 347 GIK------------------------------PGATKEFKLST-YGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred EEc------------------------------cCCceEEEEEe-ccCCHHHHHHHHHHHHHHHHh
Confidence 211 1112 556654 337999999999999998765
No 40
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.95 E-value=2.2e-25 Score=218.18 Aligned_cols=376 Identities=13% Similarity=0.088 Sum_probs=276.6
Q ss_pred hHHHHHhhhccCCCCCCeeeecCCCCCCCCHHHHHHh----hhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccc
Q 037063 95 QADRIRAQDYFHLSLNNYVCFDYIGHGLFSYSQMHSC----SSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSW 170 (588)
Q Consensus 95 ~~~~iR~~~f~~l~~~~~vyLD~a~~gl~~~~~~~~~----~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~ 170 (588)
-+..+|.. |. +. .+.||||-++-|..|+.+..+. .++|...... + | + .+. .
T Consensus 18 pl~~lr~~-f~-lp-~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lir-s---------w----~-----~a~-~-- 72 (407)
T COG3844 18 PLAKLRDR-FA-LP-GGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIR-S---------W----N-----KAK-A-- 72 (407)
T ss_pred chhhhHhh-cc-CC-CCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhh-h---------h----c-----ccC-C--
Confidence 45577764 65 33 7999999999999996555443 2333211100 0 1 1 000 0
Q ss_pred cccCCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHH-HHHHhCCCCCCCeE-EEcC-CCchhHHHHHHHHHHhc
Q 037063 171 LQYGSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFK-LLAESYPFYSNPRL-LTVY-DHENEAAALMIESSKKR 247 (588)
Q Consensus 171 ~~~g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~-lv~~s~~~~~gd~l-l~~~-e~~s~~~~~~~~~a~~~ 247 (588)
...++-+.+-.++|.++|+.++| |+.+.+++-.++ .++.+|..++|+.+ ++.. .+++..+.. ...++-.
T Consensus 73 -----~W~~lp~~lgdklApLiGA~~~E--vvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a-~g~~~~~ 144 (407)
T COG3844 73 -----DWFDLPERLGDKLAPLIGARAGE--VVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIA-EGLADLL 144 (407)
T ss_pred -----chhhchhHHHHHhhhhhcCCCCc--eEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhh-cchhhhh
Confidence 01355668889999999999887 888888877665 55566667778874 4443 344444432 3444444
Q ss_pred CCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCC
Q 037063 248 GARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKD 326 (588)
Q Consensus 248 G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d 326 (588)
|.. .+ -.+.+.+++++++++ +.+.+|.+++++.-||..+++..| ++||++|++++.|-+++++
T Consensus 145 ~~~-----~~-~~~~~~P~~~~~~~~--------dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaG-- 208 (407)
T COG3844 145 GIG-----YD-LEGVIAPRALEEAIT--------DDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAG-- 208 (407)
T ss_pred ccc-----cc-ceeeeChHHHHHhhc--------cceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccC--
Confidence 432 11 224567789999998 899999999999999999999999 9999999999999999998
Q ss_pred CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc-cccccccCCCC
Q 037063 327 MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL-DESSQSKFPES 405 (588)
Q Consensus 327 ~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~-~~~~f~e~GT~ 405 (588)
.-+++|...++||.+.+.||.+..+|.+.++|||.++..+...+...||.|- ..++.... .+.+. ...+| ..||+
T Consensus 209 avp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gh--a~pf~m~~-~y~p~~ga~rf-~~gt~ 284 (407)
T COG3844 209 AVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGH--ARPFAMEE-VYAPGPGARRF-LCGTQ 284 (407)
T ss_pred CcceeecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCC--CCcchhhh-ccCcCccccce-eeCCc
Confidence 5677788888999999999966546999999999999888777777664231 11111110 11111 12478 89999
Q ss_pred CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCC
Q 037063 406 SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNG 485 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g 485 (588)
++.+. +++..+||.....+|.+++++-..|++++.+-+...+. ...+++.+|...+.||+-|+|..+.
T Consensus 285 ~V~s~---aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~------~~~l~l~tPr~~~~rGsqvS~~hp~--- 352 (407)
T COG3844 285 PVLSL---AALEGALDIFADVDITELRKKSLALTDYFIELVEARCE------YYGLTLVTPRAHEERGSQVSLYHPH--- 352 (407)
T ss_pred chhhh---HHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccc------cCCcEEeccchhhhccceeeEecCc---
Confidence 99886 78889999999999999999999999999998887532 2378999998888899999999875
Q ss_pred CCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecC-CCCCHHHHHHHHHHHHH
Q 037063 486 TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALG-CLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 486 ~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg-~~~t~eDv~~li~~l~~ 564 (588)
...|.+.|.++||.... - . .+ .+|+.|. +|++++||...++.|.+
T Consensus 353 ----~~~V~qaLi~rGVigD~---R-----------------~--------P~--vlRfgftPlY~~~~DVw~AV~~L~e 398 (407)
T COG3844 353 ----GYQVMQALIDRGVIGDF---R-----------------E--------PD--VLRFGFTPLYVSFVDVWDAVDALEE 398 (407)
T ss_pred ----HHHHHHHHHHcCccccc---c-----------------C--------CC--eeeecCccceechhHHHHHHHHHHH
Confidence 77888999999995321 0 0 22 8999996 99999999999999999
Q ss_pred hhhhh
Q 037063 565 FLDAD 569 (588)
Q Consensus 565 ~l~~~ 569 (588)
.|+..
T Consensus 399 vL~t~ 403 (407)
T COG3844 399 VLDTL 403 (407)
T ss_pred HHHhh
Confidence 88763
No 41
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.95 E-value=6.8e-25 Score=251.69 Aligned_cols=322 Identities=15% Similarity=0.092 Sum_probs=229.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHH----HHHHHHHHhCCCCC-CC----eE-EEcCCCchhHHHHHHHHHHhc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQS----SAFKLLAESYPFYS-NP----RL-LTVYDHENEAAALMIESSKKR 247 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T----~al~lv~~s~~~~~-gd----~l-l~~~e~~s~~~~~~~~~a~~~ 247 (588)
.++++++|+.+++++|+ + .|+|++|+| +++++++.++ +++ || +| ++..+|++|..+|. ..
T Consensus 567 ~~~~~~~r~~la~i~g~--~--~v~f~pnaga~ge~a~~~vi~~~-~~~~Gd~~r~~vli~~~aH~sn~a~a~-----~~ 636 (993)
T PLN02414 567 QEMFEDLGDLLCEITGF--D--SFSLQPNAGAAGEYAGLMVIRAY-HLSRGDHHRNVCIIPVSAHGTNPASAA-----MC 636 (993)
T ss_pred HHHHHHHHHHHHHHhCC--C--eEEEcCCCcHHHHHHHHHHHHHH-HhccCCCCCCEEEeCCCcCccCHHHHH-----HC
Confidence 68899999999999999 3 399999999 9999999999 766 77 54 46789998776662 36
Q ss_pred CCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCC
Q 037063 248 GARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKD 326 (588)
Q Consensus 248 G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d 326 (588)
|++|+.++++ ++|.+|+++|+++|+. .++++++|+++++||..|...|+++| ++||++|++|++|+++..+.
T Consensus 637 G~~vv~v~~d-~~G~vDle~L~~~i~~-----~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~- 709 (993)
T PLN02414 637 GMKIVVVGTD-AKGNINIEELRKAAEA-----HKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQ- 709 (993)
T ss_pred CCEEEEeccC-CCCCcCHHHHHHHHhc-----cCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhc-
Confidence 9999999998 7899999999999981 11378999999999999999999999 99999999999999986651
Q ss_pred CCCCCCCCCCCcEEEeccCccCCC----CCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccc--
Q 037063 327 MDTLGLSLFKPDFLICSFYKIFGE----NPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS-- 400 (588)
Q Consensus 327 ~~~l~l~~~~~D~vv~S~~K~~G~----~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~-- 400 (588)
+.......+++||+++|.||+|+. +|.|+|++++++.+...+.....+ ... .+ . ++++
T Consensus 710 ~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~---~~~------~~--~-----~r~~~s 773 (993)
T PLN02414 710 VGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV---PTG------GI--P-----RPEKTQ 773 (993)
T ss_pred cCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccc---cCC------Cc--c-----cccCCC
Confidence 011112234499999999995542 234599999999765544422211 100 00 0 0221
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHhCHHHH---HHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE
Q 037063 401 KFPESSISGVSSKLVECKGLDHADALGLILI---SNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA 477 (588)
Q Consensus 401 e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i---~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~ 477 (588)
..||.+...+....++..++.++..+|.+.+ .++...+++|+.++|.+. ..+...+|.....+-.++.
T Consensus 774 ~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~---------~~~~~~~~~~~~~hEfv~~ 844 (993)
T PLN02414 774 PLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGH---------YPVLFRGKNGTCAHEFIID 844 (993)
T ss_pred CcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh---------CCccccCCCCCeeeeEEEe
Confidence 2577665443333566688889988885555 899999999999999872 2233333321101112222
Q ss_pred EE-eecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHH
Q 037063 478 FN-VFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTY 556 (588)
Q Consensus 478 f~-~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~ 556 (588)
+. +++..| ++..++.+.|.++||...+-.+ .+.+.+||+++.+++.+|+|
T Consensus 845 ~~~l~~~~g--~~~~di~krL~d~Gihapt~~~---------------------------pv~~~lmiepTE~~skeelD 895 (993)
T PLN02414 845 LRPFKNTAG--IEPEDVAKRLMDYGFHAPTMSW---------------------------PVPGTLMIEPTESESKAELD 895 (993)
T ss_pred ccccccccC--CCHHHHHHHHHHcCcEEeeecc---------------------------ccCCEEEEEeeeeCCHHHHH
Confidence 22 111112 5567787777799998654110 11228999999999999999
Q ss_pred HHHHHHHHhhhhhh
Q 037063 557 RLWAFVSRFLDADF 570 (588)
Q Consensus 557 ~li~~l~~~l~~~~ 570 (588)
+|+++|..+.++-.
T Consensus 896 rf~~al~~i~~e~~ 909 (993)
T PLN02414 896 RFCDALISIREEIA 909 (993)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998876653
No 42
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.94 E-value=6.1e-25 Score=235.32 Aligned_cols=366 Identities=13% Similarity=0.044 Sum_probs=231.6
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
.+.+.|..+..+..++.++++..... ... +.++ .|+.+ .+ .| ..++.++++++++
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~-~~~--~~~~------~~~~~-----------~~---~g--~~~~~~~~~~~la 74 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILEN-EFY--TAYT------PYQPE-----------IS---QG--RLQALFELQTMLC 74 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccc-cCc--ccCC------CCChh-----------hh---hh--HHHHHHHHHHHHH
Confidence 45688998888888777777653332 110 0000 00000 00 01 2578889999999
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCCCCC--CCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHH
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYPFYS--NPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSG 266 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~--gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e 266 (588)
+++|+++++ ++|+.|++.+.+.++.+..+.+ ||+|++ ...|++. ...+....++.|++++.++.+ +++.++.+
T Consensus 75 ~~~g~~~~~--v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~-~~~~~~~~~~~g~~~~~v~~~-~~~~~d~~ 150 (398)
T cd00613 75 ELTGMDVAN--ASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTN-PAVARTRGEPLGIEVVEVPSD-EGGTVDLE 150 (398)
T ss_pred HHHCCCccc--eeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcch-HHHHHHhcccCCcEEEEeccC-CCCCcCHH
Confidence 999997654 7778766655444433332555 899765 4455553 333333434567999999986 56678999
Q ss_pred HHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCH-HHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEecc
Q 037063 267 KLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSY-MWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSF 344 (588)
Q Consensus 267 ~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl-~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~ 344 (588)
+|++++. +++++|++++++ ++|.+.|+ ++| ++|+++|+++|+|+++..+. ...+...+++|++++|+
T Consensus 151 ~l~~~i~--------~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~--~~~~~~~~~~d~~~~s~ 219 (398)
T cd00613 151 ALKEEVS--------EEVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLT--GLKPPGEYGADIVVGNL 219 (398)
T ss_pred HHHHhcC--------CCeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEecccccc--CCCChHHcCCCEEEeec
Confidence 9999987 789999999975 89999996 999 99999999999999876541 12222234599999999
Q ss_pred CccCCC---CCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc---cccccccCCCCCccchhh--HHHH
Q 037063 345 YKIFGE---NPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL---DESSQSKFPESSISGVSS--KLVE 416 (588)
Q Consensus 345 ~K~~G~---~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~---~~~~f~e~GT~~~~~~~~--~~al 416 (588)
||+++. ++.|+|++++++++++.+.+...++.+... . .+...+... ...+| +.||.++..... .++.
T Consensus 220 ~K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~r~-e~~~~~~~~~~~~~~~~a 294 (398)
T cd00613 220 QKTGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAE--G--NRAFRLALQTREQHIRR-EKATSNICTGQALLALMA 294 (398)
T ss_pred cccCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccC--C--CcceEEecccchhhccc-ccccccceecHHHHHHHH
Confidence 998730 124689999999888776654433211000 0 000011000 01245 567766553211 1222
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHH
Q 037063 417 CKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKL 496 (588)
Q Consensus 417 ~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~ 496 (588)
..+++.+...|++++.++.++++++++++|.++ +...+ +. ..+.+++.|.+....+ .+...+.+.
T Consensus 295 ~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~---------~~~~~--~~--~~~~~~v~~~~~~~~~--~~~~~~~~~ 359 (398)
T cd00613 295 AMYIVYLGPEGLKEIAERAHLNANYLAKRLKEV---------GGVLP--FN--GPFFHEFVLRLPPLYG--IRAEDLAKA 359 (398)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhc---------CCccc--CC--CCeeEEEEEEcCCcch--HHHHHHHHh
Confidence 234455555578899999999999999999986 22221 11 1234566676653111 345667777
Q ss_pred HHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHH
Q 037063 497 ADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 497 l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l 562 (588)
|.++||.+..-. . .+...||+|+++++|.||||++++.|
T Consensus 360 L~~~gi~~~~~~-------------------~--------~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 360 LIDGGFHAPTMY-------------------L--------PVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred hhhcCccccccc-------------------c--------CCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 778888653210 0 12238999999999999999999864
No 43
>PLN03032 serine decarboxylase; Provisional
Probab=99.94 E-value=1e-24 Score=228.97 Aligned_cols=335 Identities=12% Similarity=0.090 Sum_probs=233.1
Q ss_pred CeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHH
Q 037063 111 NYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMD 190 (588)
Q Consensus 111 ~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~ 190 (588)
...++-|--..-+.+.+++.+..++.. .++||.|.+ .+|....++++++++.+++
T Consensus 23 ~~~~~gy~~~~~~~~~~~~~~~~~~~~-~~gnP~s~~------------------------~~g~~a~~~e~~v~~~ia~ 77 (374)
T PLN03032 23 SSVHFGYPYNLDFDYGELSQLMKYSIN-NLGDPFIES------------------------NYGVHSRQFEVGVLDWFAR 77 (374)
T ss_pred hhhccCCCchhccChHHHHHHHHhccc-CCCCCcccC------------------------CCCccHHHHHHHHHHHHHH
Confidence 344555555555666778888766543 468884321 1344568999999999999
Q ss_pred HhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHH
Q 037063 191 FMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKL 268 (588)
Q Consensus 191 ~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l 268 (588)
++|+++++...+||+|+|+|+.+.+.+.. ..++..|+ +..+|+| + .+.++..|.+++.||++ +++++|+++|
T Consensus 78 llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~S--v---~kaa~~lg~~~~~V~~d-~~g~id~~~L 151 (374)
T PLN03032 78 LWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYS--V---FKAARMYRMEAVKVPTL-PSGEIDYDDL 151 (374)
T ss_pred HhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeH--H---HHHHHHcCCCCeEeeeC-CCCcCcHHHH
Confidence 99998776445999999999887765532 12344644 6677875 2 34566778889999998 8899999999
Q ss_pred HHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcC-----cEEEEeCCCcCC---CC--CCCCCCCCCCC
Q 037063 269 MKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKG-----WHVLLDATALGS---KD--MDTLGLSLFKP 337 (588)
Q Consensus 269 ~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g-----~~vvvDaa~~~~---~d--~~~l~l~~~~~ 337 (588)
+++|+++ ..++.+|++++.+|++|.+.|+++| ++|+++| ++++||||+.++ .+ ...+++. .++
T Consensus 152 ~~~i~~~-----~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~-~~v 225 (374)
T PLN03032 152 ERALAKN-----RDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR-KPI 225 (374)
T ss_pred HHHHHHc-----CCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCC-cCC
Confidence 9999821 1268899999999999999999999 9999996 589999998775 11 1123443 359
Q ss_pred cEEEeccCccCCCCCCceEEEEEeCcchhcccC--CCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHH
Q 037063 338 DFLICSFYKIFGENPSGFGCLFVKKSSASVLSG--STSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLV 415 (588)
Q Consensus 338 D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~--~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~a 415 (588)
|.+++|+||++|. |.|+|+|++|++.++.+.. .+.. . .+. - -.|+.+-... +.
T Consensus 226 DSis~s~HK~~g~-P~g~G~ll~r~~~~~~~~~~~~Yl~---~-------~d~---------t--i~gSR~g~~~---l~ 280 (374)
T PLN03032 226 GSVSVSGHKFLGC-PMPCGVALTRKKHVKALSQNVEYLN---S-------RDA---------T--IMGSRNGHAP---LY 280 (374)
T ss_pred cEEEECcccccCC-CcCeEEEEEEchhhHhhccCCcccC---C-------CCC---------c--ccCCCchHHH---HH
Confidence 9999999999987 9999999999977654432 1111 0 000 0 1344432221 45
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHH
Q 037063 416 ECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQK 495 (588)
Q Consensus 416 l~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~ 495 (588)
+..+|..+-..|+.++.++..++++++.+.|.+. ++++... +...+|+|..+. .+.
T Consensus 281 ~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~----------~~~~~~~----p~~~~V~f~~~~-------~~~--- 336 (374)
T PLN03032 281 LWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA----------GLTCRLN----ELSSTVVFERPM-------DEA--- 336 (374)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----------CCcEEEC----CCceEEEEcCCC-------cHh---
Confidence 5567777766678889999999999999999884 2333332 235677776553 111
Q ss_pred HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 496 LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 496 ~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
+. +|..+.+- .. .+|+.+....+.+.||+|++.|++
T Consensus 337 -~~-~~w~l~~~-----------------------------~~--~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 337 -FI-KKWQLACE-----------------------------GD--IAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred -Hh-heeeeccc-----------------------------CC--EEEEEECCCCCHHHHHHHHHHHhc
Confidence 11 34544310 11 688888777789999999998765
No 44
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.94 E-value=4.8e-25 Score=252.93 Aligned_cols=347 Identities=16% Similarity=0.150 Sum_probs=241.3
Q ss_pred CCCCCeeeecCCCCCC----CCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 107 LSLNNYVCFDYIGHGL----FSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 107 l~~~~~vyLD~a~~gl----~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
|..++.+|+++.|.|+ +|..+++++......-..-.| | ......| .-+.+.
T Consensus 97 la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytP--------------Y---------qaEisQG--~lqal~ 151 (993)
T PLN02414 97 LASKNKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTP--------------Y---------QAEIAQG--RLESLL 151 (993)
T ss_pred HHhcCCccccccCCCCCCccCCHHHHHHHHhChHHHhhcCC--------------C---------chHHHHH--HHHHHH
Confidence 4446788999999999 777776776533311000001 0 0011112 156788
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCC--CeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCC
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSN--PRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWP 259 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~g--d~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~ 259 (588)
+.+..|++++|+++++ +.++.|+|++.+.++.++++++| ++|+ +..+|+++...| ...++..|++|+.++.+ .
T Consensus 152 ~~Qt~ia~LtG~~~an--aSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~-~t~a~~~GieV~~v~~~-~ 227 (993)
T PLN02414 152 NYQTMITDLTGLPMSN--ASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVC-QTRADGLGLEVVVADEK-D 227 (993)
T ss_pred HHHHHHHHHhCCChhh--EeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHH-HHhhhhcCCEEEEecch-h
Confidence 9999999999999876 99999999999999888888866 5654 678999866665 78888999999999874 1
Q ss_pred CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEE--eCCCcCCCCCCCCCCCCCC
Q 037063 260 NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLL--DATALGSKDMDTLGLSLFK 336 (588)
Q Consensus 260 ~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvv--Daa~~~~~d~~~l~l~~~~ 336 (588)
.+ ... +.+ ..++.+..|.+|.+.|+++| ++||++|++++| |..+.++. . ....++
T Consensus 228 ---~~------~~~--------~~v-~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iVaad~lal~~l--~--~pge~G 285 (993)
T PLN02414 228 ---FD------YSS--------GDV-CGVLVQYPATDGEVLDYAEFVKNAHANGVKVVMATDLLALTML--K--PPGEWG 285 (993)
T ss_pred ---hc------ccc--------Cce-EEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEEEECHHHhcCC--C--CHhhcc
Confidence 00 111 222 23346777889999999999 999999999999 44444442 1 133444
Q ss_pred CcEEEeccCccCCCCCCc-----eEEEEEeCcchhcccCCCCCCCceEeeecCCCcc-ccccccc-ccccccCCCCCccc
Q 037063 337 PDFLICSFYKIFGENPSG-----FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEI-IELETLD-ESSQSKFPESSISG 409 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G-----~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~-~~~~~~~-~~~f~e~GT~~~~~ 409 (588)
+||+++++|||.+ |.| .|+|+++++....++....|+ .+. ......+ ..++.+. +.|| |.||.|+..
T Consensus 286 ADi~vgsgqKwg~--P~G~GGP~aGflavr~~~~r~~PgriVG~--s~d-~~g~~~~~l~LqtReqhiRr-EkaTsNict 359 (993)
T PLN02414 286 ADIVVGSAQRFGV--PMGYGGPHAAFLATSQEYKRLMPGRIIGV--SVD-SSGKPALRMAMQTREQHIRR-DKATSNICT 359 (993)
T ss_pred CcEEEECCCcccc--CCCCCCCCeeEEEECHHHHhhCCCcccCc--ccC-CCCCcccccccccccchhhh-cccccchhH
Confidence 9999999999873 555 799999999876555455552 111 0100000 0111222 2377 899999987
Q ss_pred hhhHHHHHHHHHH-----HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCC
Q 037063 410 VSSKLVECKGLDH-----ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWN 484 (588)
Q Consensus 410 ~~~~~al~~aL~~-----l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~ 484 (588)
. .++.+++.. +...|+++|.+|+..|+.++.++|.++ ++++..+ ....+++|.+.+
T Consensus 360 ~---qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~----------G~~~~~~----~~f~~vt~~~~~-- 420 (993)
T PLN02414 360 A---QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL----------GFQVQSL----PFFDTVKVKCSD-- 420 (993)
T ss_pred H---HHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc----------CCccCCC----CCcCeEEEecCC--
Confidence 6 455555542 334689999999999999999999874 3565554 224588888643
Q ss_pred CCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 485 GTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 485 g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
+..+.+.|.++||.++.- +.+.||+|++.+||.|||++|+++|..
T Consensus 421 -----~~~v~~~L~~~gI~l~~~------------------------------~~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 421 -----ADAIADAAAKVGINLRVV------------------------------DANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred -----HHHHHHHHHHCCCeeEEe------------------------------cCCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 567777788899987632 112799999999999999999999974
No 45
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.94 E-value=4e-24 Score=226.15 Aligned_cols=344 Identities=11% Similarity=0.050 Sum_probs=229.6
Q ss_pred CCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHhCCCCCC
Q 037063 119 GHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFMNISEDD 198 (588)
Q Consensus 119 ~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~lga~~~e 198 (588)
..+++.+.+++++.++- .-++||++++ + . .+......+.++++.+++++|+ ++
T Consensus 9 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~--------------------~-~--~~~~~~~~~~~l~~~la~~~g~--~~ 61 (361)
T cd06452 9 RGGRLTPEARKALIEWG--DGYSVCDFCR--------------------G-R--LDEIEKPPIKDFHHDLAEFLGM--DE 61 (361)
T ss_pred cCCCCCHHHHHHHHHHh--cccCCccccc--------------------c-c--cccccCchHHHHHHHHHHHcCC--ce
Confidence 34677888888876554 2245553211 0 0 0111135678999999999999 33
Q ss_pred ceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEeccCC-CCccCHHHHHHHHhhhc
Q 037063 199 YTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEFAWP-NLRIHSGKLMKKIVGKR 276 (588)
Q Consensus 199 ~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~-~~~i~~e~l~~~i~~~~ 276 (588)
+++|+|+|+++.+++.++ +++||+|++. ..|++. + ..++..|++++.++.++. ++.+|+++++++++...
T Consensus 62 --i~~~~g~t~al~~~l~~~-~~~gd~Vl~~~~~~~~~-~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 133 (361)
T cd06452 62 --ARVTPGAREGKFAVMHSL-CEKGDWVVVDGLAHYTS-Y----VAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVK 133 (361)
T ss_pred --EEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCcchHH-H----HHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHh
Confidence 999999999999999998 8999997755 556542 2 245778999999999742 24799999999986200
Q ss_pred cccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccCCCCCCce
Q 037063 277 KKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIFGENPSGF 355 (588)
Q Consensus 277 ~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~ 355 (588)
+...+++++|++++++|+||...|+++| ++|+++|+++++|+++..+ ..++....+.+|++++|+||+++. |.|+
T Consensus 134 -~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g--~~~~~~~~~~~d~~~~s~~K~l~~-~~~~ 209 (361)
T cd06452 134 -DEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVG--RMPVSGKELGADFIVGSGHKSMAA-SAPI 209 (361)
T ss_pred -hccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccC--CcCCCHHHcCCCEEEecCCccccC-CCCe
Confidence 0001368999999999999999999999 9999999999999998875 223333334589999999998874 7789
Q ss_pred EEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHH
Q 037063 356 GCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRA 435 (588)
Q Consensus 356 G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~ 435 (588)
|++++++++++++....... +. +. . .+ ..+|...... +++..+++.+.+. ++.+ .+.
T Consensus 210 G~l~~~~~~~~~l~~~~~~~-~~-~~---------~------~~-~~~~~~~~~~---~~~~~al~~~~~~-~~~~-~~~ 266 (361)
T cd06452 210 GVLATTEEWADIVFRTSQMF-KI-KE---------V------EL-LGCTLRGAPL---VTLMASFPHVKER-VKRW-DEE 266 (361)
T ss_pred EEEEECHHHHHHHhcccccc-cc-ce---------e------ee-eccccCchHH---HHHHHHHHHHHHH-HHHH-HHH
Confidence 99999998887764432110 11 00 0 01 2334444332 4445666654332 2333 333
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecC----CCCCcCHHHHHHHHHhCCcEeccccccC
Q 037063 436 RYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDW----NGTRIDPALVQKLADRHNISLSCGFLQN 511 (588)
Q Consensus 436 ~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~----~g~~i~~~~v~~~l~~~gI~v~~G~~c~ 511 (588)
...++++++.|.++ ++++++++.. ...+++.|..... .+.......+.+.|.++||.+..
T Consensus 267 ~~~~~~l~~~L~~l---------~g~~v~~~~~--~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~----- 330 (361)
T cd06452 267 VEKARWFVAELEKI---------EGIKQLGEKP--KNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGIK----- 330 (361)
T ss_pred HHHHHHHHHHHhcC---------CCeEEECCCC--CCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEEc-----
Confidence 44568899999884 6788886432 3556777765420 00001123466777778997421
Q ss_pred cccccchHHHHHHHHhhhcCCCCCcCCc-cEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 512 IFFSGEYEQERVRVLETRSGTNETRSGV-SVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 512 ~~~~~~~~~~~~~~l~~~~~~~~~~~g~-~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
.+. ..+|++... .+.||+++++++|++++
T Consensus 331 -------------------------~~~~~~~ri~~~g-~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 331 -------------------------PGLTRYFKLSTYG-LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred -------------------------CCCceEEEEEecC-CCHHHHHHHHHHHHHHh
Confidence 111 179999822 59999999999998754
No 46
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.94 E-value=3.5e-25 Score=232.47 Aligned_cols=288 Identities=15% Similarity=0.057 Sum_probs=209.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCC-----------CCCC--eEEEcC-CCchhHHHHHHHH
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPF-----------YSNP--RLLTVY-DHENEAAALMIES 243 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~-----------~~gd--~ll~~~-e~~s~~~~~~~~~ 243 (588)
.++++++++.+++++|++.++..++||+|+|+|+.+++.++.- .+++ .|+++. .|.+ . ...
T Consensus 37 ~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~-~----~~~ 111 (345)
T cd06450 37 TEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVS-V----EKA 111 (345)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhH-H----HHH
Confidence 6788999999999999962334599999999999988877621 1333 455544 4543 2 234
Q ss_pred HHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCc
Q 037063 244 SKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATAL 322 (588)
Q Consensus 244 a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~ 322 (588)
++..|++++.++++ +++.+|+++|++++.+. .....+++++++++++|+||...|+++| ++|+++|+++++|+++.
T Consensus 112 ~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~--~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~ 188 (345)
T cd06450 112 AAYLDVKVRLVPVD-EDGRMDPEALEAAIDED--KAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYG 188 (345)
T ss_pred HHHHhcCeEEeeeC-CCCCcCHHHHHHHHHHH--HHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhh
Confidence 45569999999997 56789999999999721 1112278899999999999999999999 99999999999999977
Q ss_pred CCC---CCC-CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccc
Q 037063 323 GSK---DMD-TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESS 398 (588)
Q Consensus 323 ~~~---d~~-~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~ 398 (588)
.+. +.. .......++|++++|+||+++. |.|+|+++++ .
T Consensus 189 ~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~-p~g~g~~~~~----------~-------------------------- 231 (345)
T cd06450 189 GFLLPFPEPRHLDFGIERVDSISVDPHKYGLV-PLGCSAVLVR----------A-------------------------- 231 (345)
T ss_pred HHHhhChhhHHHhcCccccCEEEEchhHhhCC-CcchHHHHHH----------H--------------------------
Confidence 652 110 1001112489999999997764 8899988766 0
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEE
Q 037063 399 QSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAF 478 (588)
Q Consensus 399 f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f 478 (588)
.++..+++.+...|++++.++...+++++.+.|.++ ++++++++ .+.+++.|
T Consensus 232 ---------------~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~~----~~~~iv~f 283 (345)
T cd06450 232 ---------------LKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRAD---------PGFELLGE----PNLSLVCF 283 (345)
T ss_pred ---------------HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC---------CCeEEecC----CceeEEEE
Confidence 123356677766788999999999999999999885 56777764 34689999
Q ss_pred EeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC-CCHHHHHH
Q 037063 479 NVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL-TNFEDTYR 557 (588)
Q Consensus 479 ~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~-~t~eDv~~ 557 (588)
.+.+.....++...+.+.|.++|+.+..+... .+...+|+|++.+ ||.|||++
T Consensus 284 ~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~--------------------------~~~~~lRis~~~~~~t~~di~~ 337 (345)
T cd06450 284 RLKPSVKLDELNYDLSDRLNERGGWHVPATTL--------------------------GGPNVLRFVVTNPLTTRDDADA 337 (345)
T ss_pred EECCcchhhHHHHHHHHHHHhcCCEEEEeeEE--------------------------CCeEEEEEEecCCCCCHHHHHH
Confidence 87642000134566777777776654433111 1122899999976 59999999
Q ss_pred HHHHHHH
Q 037063 558 LWAFVSR 564 (588)
Q Consensus 558 li~~l~~ 564 (588)
+++.|++
T Consensus 338 l~~~l~~ 344 (345)
T cd06450 338 LLEDIER 344 (345)
T ss_pred HHHHHHh
Confidence 9999875
No 47
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.94 E-value=1.9e-24 Score=229.37 Aligned_cols=332 Identities=11% Similarity=0.032 Sum_probs=219.0
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
...=|||++..+++.+.+.+++..+.... |+|. .+...++...| ..++++++|+.||
T Consensus 10 ~s~~YL~~~~~~~~~~~~~~~~~~~~~~~----p~~~-----------------~~~~gs~~~~g--~~~~~~~~e~~la 66 (370)
T PRK05937 10 VTNDFLGFSRSDTLVHEVEKRYRLYCRQF----PHAQ-----------------LGYGGSRAILG--PSSLLDDLEHKIA 66 (370)
T ss_pred ECCCccCCCCCHHHHHHHHHHHHHhcccc----CCCC-----------------CCCCCcCcccC--ChHHHHHHHHHHH
Confidence 45569999999999999999886654221 3220 01112232222 2678999999999
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHH
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKL 268 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l 268 (588)
+++|++ ..++|++|.+..+ .++..+ .++|+.|++ ..+|.+ ....+. . ..|..+. ++ ..|+++|
T Consensus 67 ~~~~~~---~~l~~~sG~~a~~-~~~~~~-~~~~d~ii~d~~~H~s-v~~~~~-~--~~~~~~~-~~------~~d~~~l 130 (370)
T PRK05937 67 HFHGAP---EAFIVPSGYMANL-GLCAHL-SSVTDYVLWDEQVHIS-VVYSLS-V--ISGWHQS-FR------HNDLDHL 130 (370)
T ss_pred HHhCCC---eEEEECChHHHHH-HHHHHh-CCCCCEEEEEhhhhHH-HHHHHH-H--cCCceEE-ec------CCCHHHH
Confidence 999994 2488888886554 344444 456777776 445544 333322 2 1243332 22 3588999
Q ss_pred HHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC---CCCC----CCCCCCCCCcEE
Q 037063 269 MKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS---KDMD----TLGLSLFKPDFL 340 (588)
Q Consensus 269 ~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~---~d~~----~l~l~~~~~D~v 340 (588)
+++|+.. +...+++.+|++++++|++|.+.|+++| ++|+++|++++||++|..+ .+.. .++.. ..+.+
T Consensus 131 ~~~l~~~--~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~--~~~~~ 206 (370)
T PRK05937 131 ESLLESC--RQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYE--NFYAV 206 (370)
T ss_pred HHHHHhh--hccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCC--CCcEE
Confidence 9998721 1111356788899999999999999999 9999999999999999875 2221 12221 13466
Q ss_pred EeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHH
Q 037063 341 ICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGL 420 (588)
Q Consensus 341 v~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL 420 (588)
+.|++|++| |.|.|+++.++ ....+...... . +| +.| .+...+ +++.+++
T Consensus 207 ~~tlsK~~g--~~G~~vl~~~~-~~~~~~~~~~~---------------------~-~~-s~~-~~~~~~---~a~~aal 256 (370)
T PRK05937 207 LVTYSKALG--SMGAALLSSSE-VKQDLMLNSPP---------------------L-RY-STG-LPPHLL---ISIQVAY 256 (370)
T ss_pred EEechhhhh--cCceEEEcCHH-HHHHHHHhCCC---------------------C-ee-cCC-CCHHHH---HHHHHHH
Confidence 789999999 78988887644 33222211100 0 23 333 233333 6778999
Q ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhC
Q 037063 421 DHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRH 500 (588)
Q Consensus 421 ~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~ 500 (588)
+++...| +.+.++++.+++++.+.|... + .+.++.+.+.+ .....+.+.|.++
T Consensus 257 ~~l~~~~-~~~~~~l~~l~~~l~~~l~~~---------------~------~~~~~~i~~~~-----~~~~~~~~~L~~~ 309 (370)
T PRK05937 257 DFLSQEG-ELARKQLFRLKEYFAQKFSSA---------------A------PGCVQPIFLPG-----ISEQELYSKLVET 309 (370)
T ss_pred HHHHhCc-HHHHHHHHHHHHHHHHhcCCC---------------C------CCCEEEEEeCC-----hhHHHHHHHHHHC
Confidence 9998877 667889999999998876541 0 01233345544 3456788888999
Q ss_pred CcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 501 NISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 501 gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
||.++. +|.+ ..+.||+|++.++|.|||+++++.|++++++
T Consensus 310 gi~v~~--~~~~-------------------------~~~~iRis~~~~~t~edid~l~~~L~~~~~~ 350 (370)
T PRK05937 310 GIRVGV--VCFP-------------------------TGPFLRVNLHAFNTEDEVDILVSVLATYLEK 350 (370)
T ss_pred CeeEEe--eCCC-------------------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 998863 3421 1228999999999999999999999998754
No 48
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.94 E-value=4.4e-24 Score=225.59 Aligned_cols=296 Identities=15% Similarity=0.091 Sum_probs=214.1
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC---------------eEEEcCCCchhHH-HHHH
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP---------------RLLTVYDHENEAA-ALMI 241 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd---------------~ll~~~e~~s~~~-~~~~ 241 (588)
.++++++++++++++|++ .+++|+|+|+|+.+++.++ +++|| +|+++.+|..+.. .+ .
T Consensus 44 ~~~~~~~~~~~a~~~g~~----~~~~~~g~t~al~~al~al-~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~-~ 117 (363)
T TIGR01437 44 KELVNKTGEYIANLLGVE----DAVIVSSASAGIAQSVAAV-ITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPV-E 117 (363)
T ss_pred HHHHHHHHHHHHHhhCCC----eEEEEcCHHHHHHHHHHHH-hcCCCcchhhcccccccccceEEEECccchhcCCch-H
Confidence 578899999999999984 2899999999999999999 88888 7766665554221 12 3
Q ss_pred HHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEE-EeCCCCCCCccCCHHHH-HHHHHcCcEEEEeC
Q 037063 242 ESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFV-FPLQSKVTGARYSYMWM-SVAAEKGWHVLLDA 319 (588)
Q Consensus 242 ~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~-~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDa 319 (588)
..+...|+++++++++ +.+|+++++++|+ ++|++++ ++..+|++|...|+++| ++||++|+++++|+
T Consensus 118 ~~~~~~g~~~v~v~~~---~~~d~~~le~ai~--------~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~ 186 (363)
T TIGR01437 118 TMVRLGGGKVVEAGYA---NECSAEQLEAAIT--------EKTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDA 186 (363)
T ss_pred HHHHhcCCeEEEEcCC---CCCCHHHHHHhcC--------hhceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEEC
Confidence 4456679999999874 4599999999998 7788665 56678899999999999 99999999999999
Q ss_pred CCcCCCC-CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccc
Q 037063 320 TALGSKD-MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESS 398 (588)
Q Consensus 320 a~~~~~d-~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~ 398 (588)
+|..... ...+ ++|++++|+||+++. |. .|+++.+++.++.+++...+. +. .
T Consensus 187 a~~~~~~~~~~~-----g~D~~~~S~~K~l~g-p~-~G~l~~~~~~i~~~~~~~~~~-~~-------------------~ 239 (363)
T TIGR01437 187 AAEEDLQKYYRL-----GADLVIYSGAKAIEG-PT-SGLVLGKKKYIEWVKLQSKGI-GR-------------------A 239 (363)
T ss_pred CCCCchHHHHHc-----CCCEEEEeCCcccCC-Cc-eEEEEEcHHHHHHHHhccCCC-cc-------------------e
Confidence 9985421 1123 389999999995542 77 799998887777665433321 10 2
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCc---ccE
Q 037063 399 QSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDR---GPS 475 (588)
Q Consensus 399 f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~r---g~i 475 (588)
+ +.|+.+ ++++.++++++.+.|.+.+.++.+. ++++.++|.++ ++++++.+...... ...
T Consensus 240 ~-~~~~~~------~~gl~aAl~~~~~~~~~~~~~~~~~-~~~l~~~L~~i---------~g~~~~~~~~~~~~~~~~~~ 302 (363)
T TIGR01437 240 M-KVGKEN------ILGLTAALEQYLSTGKESGAEMVAK-LTPFIEALNTL---------KGVSASIVQDEAGRDIARAE 302 (363)
T ss_pred e-ccCHHH------HHHHHHHHHHHHccCcccHHHHHHH-HHHHHHHHhcC---------CCeEEEEecCCCCCcCceEE
Confidence 2 444433 2677889999888787777777665 55799999884 67887753221111 134
Q ss_pred EEEEeecCCCCCcCHHHHHHHHHhCC--cEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHH
Q 037063 476 LAFNVFDWNGTRIDPALVQKLADRHN--ISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFE 553 (588)
Q Consensus 476 v~f~~~~~~g~~i~~~~v~~~l~~~g--I~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~e 553 (588)
+.|+... ..+++..+.+.|.+.| |.+|.- . ...+.+|+++.. ++++
T Consensus 303 v~~~~~~---~g~~~~~l~~~L~~~~~~I~~r~~-~---------------------------~~~~~~~l~~~~-~~~~ 350 (363)
T TIGR01437 303 IRFDESE---LGMTAADVVQALRQGEPAIYTRGY-K---------------------------ANEGIIEIDPRS-VTGG 350 (363)
T ss_pred EEEeccC---CCCCHHHHHHHHhcCCCCEEEeee-e---------------------------ecCCeEEEEeec-CCHH
Confidence 5555431 1267889999998777 555531 0 112288999875 5599
Q ss_pred HHHHHHHHHHHhh
Q 037063 554 DTYRLWAFVSRFL 566 (588)
Q Consensus 554 Dv~~li~~l~~~l 566 (588)
|+++++++|++++
T Consensus 351 e~~~~~~~l~~~~ 363 (363)
T TIGR01437 351 QLDIIVERIREIV 363 (363)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998764
No 49
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.93 E-value=3.7e-23 Score=219.50 Aligned_cols=311 Identities=10% Similarity=0.065 Sum_probs=212.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
...+.+.++.+|+++|++ + +++++|+++++.+++.++ +++||+|+++ .+|++ .+ ..++..|++++.++.
T Consensus 50 ~~~~~~~~e~lA~~~g~~--~--~~i~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~h~s-~~----~~~~~~g~~~~~~~~ 119 (370)
T TIGR02539 50 KPPIHDFLEDLAEFLGMD--E--ARVTHGAREGKFAVMHAL-CKEGDWVVLDGLAHYT-SY----VAAERAGLNVKEVPH 119 (370)
T ss_pred chHHHHHHHHHHHHhCCC--c--eEEECChHHHHHHHHHHh-hCCCCEEEECCcccHH-HH----HHHHHcCCEEEEEec
Confidence 345678899999999995 2 667899999999999999 7999997764 56665 22 235778999999997
Q ss_pred cC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCC
Q 037063 257 AW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSL 334 (588)
Q Consensus 257 ~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~ 334 (588)
+. +++.+|+++|+++++.. .+...+++++|++++++|++|...|+++| ++|+++|+++++|+++..+. .+++...
T Consensus 120 ~~~~~~~~d~~~l~~~l~~~-~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~--~~~~~~~ 196 (370)
T TIGR02539 120 TGHPEYKVDPEGYGEVIEEV-EDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGR--MPVSAKE 196 (370)
T ss_pred CCcccCCcCHHHHHHHHHHh-hhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCC--cCCCHHH
Confidence 52 34778999999998621 00111368899999999999999999999 99999999999999988862 2222223
Q ss_pred CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHH
Q 037063 335 FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKL 414 (588)
Q Consensus 335 ~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~ 414 (588)
+.+|+++.|+||++|. +.++|++++++++++.+...... ..++.. .+ ..+|...... .
T Consensus 197 ~~~di~v~s~sK~~~~-~g~~G~l~~~~~~i~~l~~~~~~--~~~~~~---------------~~-~~~~~~~~~~---~ 254 (370)
T TIGR02539 197 IGADFIVGSGHKSMAA-SGPCGVLGMSEEWEDIVLRKSRY--SPVKEV---------------EL-LGCTSRGAPI---V 254 (370)
T ss_pred cCCCEEEeeCcccccC-CCCEEEEEECHHHHhhhcccccC--Ccccee---------------ee-ecccccccHH---H
Confidence 4589999999999984 56699999999998877654322 111000 00 1223332222 3
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCC----CCCcCH
Q 037063 415 VECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWN----GTRIDP 490 (588)
Q Consensus 415 al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~----g~~i~~ 490 (588)
++..+++...+. ++... +....+++++++|.++ +++++++.. ..++++.+.++... |..-..
T Consensus 255 ~~~~al~~~~~~-l~~~~-~~~~~~~~l~~~L~~~----------g~~~~~~~~--s~t~~v~~~~~~~~~~~~~~~~~~ 320 (370)
T TIGR02539 255 TMMASFPHVVER-VKRWD-EEVKKTRWFVAELEDI----------GFIQLGQKP--KEHDLVKFETPGFHEIAQKHKRRG 320 (370)
T ss_pred HHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHhC----------CcEEEccCC--CcCceEEEECCchhHHhhhhcccc
Confidence 444556543221 23222 3334467899999885 366654322 35678877764310 111123
Q ss_pred HHHHHHHHhCCcE-eccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 491 ALVQKLADRHNIS-LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 491 ~~v~~~l~~~gI~-v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
..+.+.|.++||. ++.| ....+|+|+. ..+.||++++++.|++++++
T Consensus 321 ~~~~~~L~e~GI~~ir~~------------------------------~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 321 YFLYEELKKRGIHGIRSG------------------------------QTKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred HHHHHHHHhCCCccccCC------------------------------cceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 4577788888996 5432 0128999973 45999999999999988653
No 50
>PLN02452 phosphoserine transaminase
Probab=99.93 E-value=6.8e-24 Score=222.68 Aligned_cols=350 Identities=14% Similarity=0.086 Sum_probs=246.8
Q ss_pred CeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHH
Q 037063 111 NYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMD 190 (588)
Q Consensus 111 ~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~ 190 (588)
.++|+=.+|-+.+|..|++++.+.+.. +.+. +++...+++++ ..-.++++++++.+.+
T Consensus 6 ~~~~~f~pGP~~lp~~Vl~~~~~~~~~--~~~~----------g~s~~~~sHRs----------~~f~~i~~~~~~~L~~ 63 (365)
T PLN02452 6 GRVFNFSAGPATLPANVLAKAQAELYN--WEGS----------GMSVMEMSHRG----------KEFLSIIQKAEADLRE 63 (365)
T ss_pred CceEeeeCCCCCCCHHHHHHHHHHHhc--cccc----------CccccccCCCc----------hHHHHHHHHHHHHHHH
Confidence 346666788889999999998766421 1111 11111122211 1126899999999999
Q ss_pred HhCCCCCCceEEEe-cCHHHHHHHHHHhCCCCCCCeE-EEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCC--CccCHH
Q 037063 191 FMNISEDDYTLVFT-ANQSSAFKLLAESYPFYSNPRL-LTVYDHENEAAALMIESSKKRGARVSSAEFAWPN--LRIHSG 266 (588)
Q Consensus 191 ~lga~~~e~~vvft-~g~T~al~lv~~s~~~~~gd~l-l~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~--~~i~~e 266 (588)
++++ |++|.|+|. .|+|.++..+..++ +.+|+++ +.....++ -.| .+.|++.|...+.+...+.+ ..++++
T Consensus 64 l~~~-p~~y~v~~l~Gsgt~~~ea~~~nl-~~~~~~~l~~~~G~fg--~r~-~~~a~~~g~~~~~~~~~~~~~~~~~~~~ 138 (365)
T PLN02452 64 LLDI-PDNYEVLFLQGGASTQFAAIPLNL-CKPGDKADFVVTGSWS--KKA-AKEAKKYCKTNVIASGKDEKYTKIPSVS 138 (365)
T ss_pred HhCC-CCCceEEEEeCccHHHHHHHHHhc-CCCCCeEEEEECCHHH--HHH-HHHHHHhCCCcEEEecCCCCCCCCCChH
Confidence 9998 455777666 78899999999999 8889984 45555553 334 67788888744444322111 124554
Q ss_pred HHHHHHhhhccccCCCcceEEEEeCCCCCCCcc-CCHHHHHHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccC
Q 037063 267 KLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGAR-YSYMWMSVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFY 345 (588)
Q Consensus 267 ~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~-~pl~~I~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~ 345 (588)
++ + .+++...|.++|..+.||+. .|++++. +++++||+++.++ ..+++++++.+|| +|.|
T Consensus 139 ~~----~------~~~~~~~v~~~hnETstGv~~~~~~~i~-----~~~lvVDa~Ss~g--~~pidv~~~~v~~--~saq 199 (365)
T PLN02452 139 EW----E------LTPDAKFVHICANETIHGVEFKDYPDVG-----NVPLVADMSSNFL--SKPVDVSKYGVIY--AGAQ 199 (365)
T ss_pred Hc----C------CCCCCcEEEECCCCCCCcEecCcccccC-----CCeEEEECCcccc--CcccCHHHcCEEE--Eecc
Confidence 43 2 11568999999999999995 7877762 2899999999998 5677777766766 6999
Q ss_pred ccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHH
Q 037063 346 KIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADA 425 (588)
Q Consensus 346 K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~ 425 (588)
|.+| |.|+|++++|+++++++.+.... +.+ ....... .+..+||++..+ +++..+|+++.+
T Consensus 200 K~lG--P~Gl~~v~vr~~~l~~~~~~~~~---~~~-------~~~~~~~----~s~~~TP~v~~i---~~l~~aL~~l~~ 260 (365)
T PLN02452 200 KNVG--PSGVTIVIIRKDLIGNARPITPG---MLD-------YKIHAEN----DSLYNTPPCFGI---YMCGLVFEDLLA 260 (365)
T ss_pred cccC--CCCeEEEEEcHHHHhhcccCCCc---hhh-------HHHHHhc----CCccCChhHHHH---HHHHHHHHHHHH
Confidence 9999 89999999999998776543211 110 0000000 002468888886 899999999998
Q ss_pred h-CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCC-CCCCCcc-cEEEEEeecCCCCCcCHHHHHHHHHhCCc
Q 037063 426 L-GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGP-KVMFDRG-PSLAFNVFDWNGTRIDPALVQKLADRHNI 502 (588)
Q Consensus 426 ~-G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p-~~~~~rg-~iv~f~~~~~~g~~i~~~~v~~~l~~~gI 502 (588)
. |++.+.+|.++++++|++.|+++ +++ |.+ .++..|+ .+++|++.+.+ ..+.+.+.++++|+
T Consensus 261 ~gGl~~~~~r~~~~a~~l~~~l~~~---------~G~--y~~~~~~~~rs~~~vsF~~~~~~----~~~~f~~~~~~~g~ 325 (365)
T PLN02452 261 QGGLKAMEKRNIRKADLLYDAIDES---------NGF--YVCPVEKSVRSLMNVPFTLGGSE----LEAEFVKEAAKAGM 325 (365)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhC---------CCc--ccCCCChHHhCCeEEEEEcCCch----hHHHHHHHHHHCCC
Confidence 7 89999999999999999999984 344 343 2222344 58999987632 35678889999999
Q ss_pred EeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 503 SLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 503 ~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
....|... .| .+|+|+--..+.|||++|++++++|-++
T Consensus 326 ~~~~G~r~--------------------------~g--g~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 326 VQLKGHRS--------------------------VG--GMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred cccCCccc--------------------------cC--ceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 98777321 33 5999998888999999999999998654
No 51
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.93 E-value=9.8e-24 Score=229.56 Aligned_cols=320 Identities=11% Similarity=0.068 Sum_probs=221.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.+.+.+.++.+++++|+++++ +++|+|+|+++..++.++.+++|++|+ +...|++. ...+..+++..|++++.++.
T Consensus 111 ~~~~~e~~~~la~l~g~~~~~--v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~-~~~~~~~~~~~G~~~~~v~~ 187 (447)
T PRK00451 111 LQAIFEYQTMICELTGMDVAN--ASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEY-REVLKTYLKGQGIEVVEVPY 187 (447)
T ss_pred HHHHHHHHHHHHHHhCCCcce--EEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHH-HHHHHHHHHhCCcEEEEecC
Confidence 566777888999999998664 999999999999998887557899965 45566653 33334566778999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEE--eCCCcCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLL--DATALGSKDMDTLGLS 333 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvv--Daa~~~~~d~~~l~l~ 333 (588)
+ ++ .++.++|+++|+ ++|++|+++++ |+||.+.|+++| ++|+++|+++++ |...... +.. ..
T Consensus 188 ~-~~-~~d~~~l~~~i~--------~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~~g~--~~~--~~ 252 (447)
T PRK00451 188 E-DG-VTDLEALEAAVD--------DDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPVSLGL--LKP--PG 252 (447)
T ss_pred C-CC-CCCHHHHHHhcC--------CCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChHHhcc--CCC--cc
Confidence 7 45 899999999998 78999999998 889999999999 999999999998 6543221 111 12
Q ss_pred CCCCcEEEeccCcc-----CCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccc--ccc-cccccccCCCC
Q 037063 334 LFKPDFLICSFYKI-----FGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIEL--ETL-DESSQSKFPES 405 (588)
Q Consensus 334 ~~~~D~vv~S~~K~-----~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~--~~~-~~~~f~e~GT~ 405 (588)
.+++|++++|.||| +| +.|+|++++++++++.+++...|+ ..+... .....+ ..+ ...++ +.+|.
T Consensus 253 ~~~~D~~~~s~~k~~~~~~~~--Gpg~G~l~~~~~~~~~~~~~~~g~--~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~ 325 (447)
T PRK00451 253 EYGADIVVGEGQPLGIPLSFG--GPYLGFFATRKKLVRQMPGRLVGE--TVDADG--KRGFVLTLQAREQHIRR-EKATS 325 (447)
T ss_pred cCCCCEEEECCCcCCCCCCCC--CCCchHHHhhHHHHhhCCCCEeee--ecccCC--CeeeEeecccccccccc-ccccc
Confidence 34599999999996 45 338999999999988887665552 111000 000000 000 11144 55666
Q ss_pred CccchhhHHHHH--HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecC
Q 037063 406 SISGVSSKLVEC--KGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDW 483 (588)
Q Consensus 406 ~~~~~~~~~al~--~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~ 483 (588)
++.....+.++. .+++++.+.|++++.+++..++++++++|.++ ++++++.. .....+.+.+.
T Consensus 326 ~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~----~~~~~~~v~~~-- 390 (447)
T PRK00451 326 NICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEI---------GGVELFDG----PFFNEFVVRLP-- 390 (447)
T ss_pred cccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhc---------CCEEecCC----CeEEEEEEecC--
Confidence 665431112222 34566666789999999999999999999985 56776521 11112223321
Q ss_pred CCCCcCHHHHHHHHHhCCcEecc-c-cccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHH
Q 037063 484 NGTRIDPALVQKLADRHNISLSC-G-FLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAF 561 (588)
Q Consensus 484 ~g~~i~~~~v~~~l~~~gI~v~~-G-~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~ 561 (588)
.+...+.+.|.++||..+. + .++ .. .. +.+|+|++.++|.|||++|++.
T Consensus 391 ----~~~~~~~~~L~~~gi~~~~~~~~~~-----------------~~------~~--~~~rvs~~~~~t~e~i~~l~~~ 441 (447)
T PRK00451 391 ----KPAEEVNEALLEKGILGGYDLGRYY-----------------PE------LG--NHLLVCVTEKRTKEDIDALVAA 441 (447)
T ss_pred ----CCHHHHHHHHHhcCCCCCccccccc-----------------CC------cC--CEEEEecCCCCCHHHHHHHHHH
Confidence 2356777777788886421 1 010 00 01 2899999999999999999999
Q ss_pred HHHhh
Q 037063 562 VSRFL 566 (588)
Q Consensus 562 l~~~l 566 (588)
|++++
T Consensus 442 L~~~~ 446 (447)
T PRK00451 442 LGEVL 446 (447)
T ss_pred HHHHh
Confidence 98764
No 52
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.93 E-value=6e-23 Score=199.93 Aligned_cols=327 Identities=15% Similarity=0.149 Sum_probs=243.9
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
-.+.+++++-+...|.... .+.+++..+++.|+..++-.+ +.|||+++ ....-.+ ..| ...+++.|++|..++.
T Consensus 49 ~qIm~~v~egikyVFkT~n-~~tf~isgsGh~g~E~al~N~-lePgd~vLv~~~G~wg--~ra-~D~~~r~ga~V~~v~~ 123 (385)
T KOG2862|consen 49 VQIMDEVLEGIKYVFKTAN-AQTFVISGSGHSGWEAALVNL-LEPGDNVLVVSTGTWG--QRA-ADCARRYGAEVDVVEA 123 (385)
T ss_pred HHHHHHHHHHHHHHhccCC-CceEEEecCCcchHHHHHHhh-cCCCCeEEEEEechHH--HHH-HHHHHhhCceeeEEec
Confidence 5788899999999999864 367999999999999999999 99999965 3444442 344 6788999999999998
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH--HHHHHcCcEEEEeCCCcCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM--SVAAEKGWHVLLDATALGSKDMDTLGLSL 334 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I--~~a~~~g~~vvvDaa~~~~~d~~~l~l~~ 334 (588)
++ ...+..+++.++|.+ .++++|+++|..+.||+..|+.++ ++||+|+++++||++++++ ..++-+++
T Consensus 124 ~~-G~~~~le~i~~~lsq-------h~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlg--gt~F~mDe 193 (385)
T KOG2862|consen 124 DI-GQAVPLEEITEKLSQ-------HKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLG--GTEFEMDE 193 (385)
T ss_pred Cc-ccCccHHHHHHHHHh-------cCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcC--Cccceehh
Confidence 84 456899999999984 689999999999999999996665 9999999999999999887 56677777
Q ss_pred CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCC-CceEeeecCCCcccccccccccccccCCCCCccchhhH
Q 037063 335 FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSV-STIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSK 413 (588)
Q Consensus 335 ~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~-~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~ 413 (588)
|++|+.....+|.+|. |.|++.+..++...++++....+- ....+.. ..+.++-.+.. ++. ..-|+++..+
T Consensus 194 wgVDvaytgSQKaL~a-P~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~-~~~~~wgc~~e--~~~-yhhT~pv~ll--- 265 (385)
T KOG2862|consen 194 WGVDVAYTGSQKALGA-PAGLSIISFSDKALEAIRDRKTKPVSFYFDIL-RLGNFWGCDGE--PRA-YHHTPPVQLL--- 265 (385)
T ss_pred hcccEEEecchhhcCC-CCCcceeecCHHHHHHHhhccCCceEEEEeHH-hhcchhccCCc--ccc-cccCCcHHHH---
Confidence 8899999999999986 999999999998888776554321 0111100 00001111111 122 3457776664
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE-EEEeecCCCCCcCHHH
Q 037063 414 LVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL-AFNVFDWNGTRIDPAL 492 (588)
Q Consensus 414 ~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv-~f~~~~~~g~~i~~~~ 492 (588)
+++.+||+++.+.|++++.+|.+++++|++..|.++ |...+.+ + ++.|.+.+ +..++. | +|..+
T Consensus 266 y~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-------GLq~fv~---~-e~~rlptvttv~vp~--g--vDw~d 330 (385)
T KOG2862|consen 266 YSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-------GLQLFVV---D-EELRLPTVTTVKVPY--G--VDWKD 330 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------Cccceec---C-hhhccCcceeeecCC--C--CCHHH
Confidence 999999999999999999999999999999999997 4443322 1 12454433 344432 1 56666
Q ss_pred HH-HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec-CCCCCHHHHHHHHHHHHHhhhh
Q 037063 493 VQ-KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL-GCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 493 v~-~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl-g~~~t~eDv~~li~~l~~~l~~ 568 (588)
|. ++.++.++.+..|.- ..+-.++||.+ |.-.|.|-|++.++.|+..+..
T Consensus 331 Vv~~~~~~~~vei~gglg--------------------------~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 331 VVAYAMSHYVVEIGGGLG--------------------------PTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred HHHHHHHhcCEEeccccC--------------------------CCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 55 555666888876621 02222899996 7778999999999998876654
No 53
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.92 E-value=1.1e-22 Score=217.63 Aligned_cols=299 Identities=12% Similarity=0.078 Sum_probs=204.2
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.+...++|+.||+++|.+ + +++++|+++|++.++.++ +++||+|++ ..+|++ .... ++..+++...++
T Consensus 82 ~~~~~~le~~ia~~~g~~--~--~ii~~~~~~a~~~~~~~l-~~~gd~vi~~~~~~~s-~~~~----~~~~~~~~~~~~- 150 (393)
T TIGR01822 82 QDIHKELEAKIAAFLGTE--D--TILYASCFDANGGLFETL-LGAEDAIISDALNHAS-IIDG----VRLCKAKRYRYA- 150 (393)
T ss_pred hHHHHHHHHHHHHHhCCC--c--EEEECchHHHHHHHHHHh-CCCCCEEEEeccccHH-HHHH----HHhcCCceEEeC-
Confidence 467789999999999983 2 555578899999999999 899999765 445554 3332 233455543322
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCC-C------
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDM-D------ 328 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~-~------ 328 (588)
.+|++++++.|+.. ...+.++++|++++++|+||.+.|+++| ++|+++|+++++|+++..+... .
T Consensus 151 -----~~d~~~l~~~i~~~--~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~ 223 (393)
T TIGR01822 151 -----NNDMADLEAQLKEA--RAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHE 223 (393)
T ss_pred -----CCCHHHHHHHHHhh--hhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHH
Confidence 36889999998720 0111378999999999999999999999 9999999999999998665210 0
Q ss_pred CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc
Q 037063 329 TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS 408 (588)
Q Consensus 329 ~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~ 408 (588)
..++. .++|++++|+||++|. + ..|+++.++++++.+.+.... . .| .+|.+..
T Consensus 224 ~~~~~-~~~di~~~s~sK~l~g-~-r~G~~~~~~~~~~~l~~~~~~---~-------------------~~--~~~~~~~ 276 (393)
T TIGR01822 224 LCGVM-GRVDIITGTLGKALGG-A-SGGFTTARKEVVELLRQRSRP---Y-------------------LF--SNSLPPA 276 (393)
T ss_pred hcCCC-CCCeEEEEEChHHhhC-C-CcEEEEeCHHHHHHHHHhCcc---c-------------------ee--cCCCCHH
Confidence 12222 2489999999998772 4 569999998887766542111 0 01 2222222
Q ss_pred chhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCc
Q 037063 409 GVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i 488 (588)
.+ ++..++++.++. ++.+.++++++++++.+.|.++ ++.+..+ .++++.+.+.+. .
T Consensus 277 ~~---~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~-----~~~~~~i~~~~~----~ 332 (393)
T TIGR01822 277 VV---GASIKVLEMLEA--SNELRDRLWANTRYFRERMEAA----------GFDIKPA-----DHPIIPVMLYDA----V 332 (393)
T ss_pred HH---HHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc----------CCCCCCC-----CCCEEEEEeCCH----H
Confidence 22 345567776643 5778899999999999999874 2333322 245666655431 2
Q ss_pred CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 489 DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 489 ~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+...+.+.|.++||.+. +... +. . ..+...||+|+++++|.+||+++++.|++.+++
T Consensus 333 ~~~~l~~~L~~~gI~v~-~~~~-~~-------------~--------~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 333 LAQRFARRLLEEGIYVT-GFFY-PV-------------V--------PKGQARIRVQISAAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred HHHHHHHHHHHCCeeEe-eeCC-CC-------------C--------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 34556666667799987 4221 10 0 012237999999999999999999999987653
No 54
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.92 E-value=3.8e-23 Score=238.55 Aligned_cols=302 Identities=18% Similarity=0.135 Sum_probs=223.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCC--CeE-EEcCCCchhHHHHHHHHHHhcCCEEEEE
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSN--PRL-LTVYDHENEAAALMIESSKKRGARVSSA 254 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~g--d~l-l~~~e~~s~~~~~~~~~a~~~G~~v~~v 254 (588)
-+.+.+.+..++++.|+++.+ +.++.++|++.+.++.+++++++ ++| ++..+|+++...| ...++..|++|+.+
T Consensus 120 Leal~~~Qt~la~LtG~~~an--aSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~-~t~a~~~G~ev~~~ 196 (954)
T PRK05367 120 LEALLNFQTMVADLTGLEIAN--ASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVL-RTRAEPLGIEVVVG 196 (954)
T ss_pred HHHHHHHHHHHHHHHCCChhh--ccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHH-HHHHHhCCCEEEEe
Confidence 567789999999999998776 99999999999999999888875 775 5678898866655 67888999999999
Q ss_pred eccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCC---cCCCCCCCC
Q 037063 255 EFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATA---LGSKDMDTL 330 (588)
Q Consensus 255 ~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~---~~~~d~~~l 330 (588)
+.+ .+ ++ + +++ ..++.+..|.+|.+.|+++| ++||++|++++||+.+ .+..++..+
T Consensus 197 ~~~-~d--~~--------~--------~~~-~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~ 256 (954)
T PRK05367 197 DAA-KA--LD--------H--------DDV-FGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEM 256 (954)
T ss_pred cCc-cC--CC--------c--------ccE-EEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhc
Confidence 875 21 11 2 334 34566667899999999999 9999999999999954 334444455
Q ss_pred CCCCCCCcEEEeccCcc-----CCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcc-ccccccc-ccccccCC
Q 037063 331 GLSLFKPDFLICSFYKI-----FGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEI-IELETLD-ESSQSKFP 403 (588)
Q Consensus 331 ~l~~~~~D~vv~S~~K~-----~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~-~~~~~~~-~~~f~e~G 403 (588)
| +||+++++||| ||. | |.|++++++++.+.+++...|+ .... .....+ ..++.++ +.|| |.|
T Consensus 257 G-----aDi~vgs~qkfg~P~g~GG-P-~aGflavr~~~~r~lpgrivG~--s~d~-~g~~~~~lalqtReqhiRr-eka 325 (954)
T PRK05367 257 G-----ADIAVGSAQRFGVPMGFGG-P-HAAYFAVRDAYKRSMPGRIVGV--SVDA-AGNPALRLALQTREQHIRR-EKA 325 (954)
T ss_pred C-----CCEEEeeCcccCCCCCCCC-C-CEEEEEECHHHHhhCCCCeeee--eccc-CCCcccccccccccccccc-ccc
Confidence 5 99999999998 662 4 6999999999888888776552 1110 000000 0011221 2377 899
Q ss_pred CCCccchhhHHHHHHH--HHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEee
Q 037063 404 ESSISGVSSKLVECKG--LDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVF 481 (588)
Q Consensus 404 T~~~~~~~~~~al~~a--L~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~ 481 (588)
|.|+.....+.++.++ +.++...|+++|.+|+..|++++.++|.+. ++++..+ ....+++|.+.
T Consensus 326 TsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~----------G~~~~~~----~~f~~~~~~~~ 391 (954)
T PRK05367 326 TSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL----------GLEVVHD----SFFDTLTVEVG 391 (954)
T ss_pred ccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc----------CcccCCC----CCCCeEEEeCC
Confidence 9999875333333333 255677799999999999999999999763 4555433 23357777753
Q ss_pred cCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHH
Q 037063 482 DWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAF 561 (588)
Q Consensus 482 ~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~ 561 (588)
.++..+.+.|.++||.++.- ....||+|++.++|.+||++|++.
T Consensus 392 ------~~~~~i~~~l~~~gi~~~~~------------------------------~~~~l~is~~e~~t~~did~l~~~ 435 (954)
T PRK05367 392 ------GDAAAVLARALAAGINLRRV------------------------------DDDHVGISLDETTTREDLAALLAV 435 (954)
T ss_pred ------CCHHHHHHHHHHCCceeccc------------------------------cCCEEEEEecccCCHHHHHHHHHH
Confidence 24778888888899987421 112799999999999999999999
Q ss_pred HH
Q 037063 562 VS 563 (588)
Q Consensus 562 l~ 563 (588)
+.
T Consensus 436 l~ 437 (954)
T PRK05367 436 FG 437 (954)
T ss_pred Hc
Confidence 97
No 55
>PRK07179 hypothetical protein; Provisional
Probab=99.92 E-value=9.6e-23 Score=219.12 Aligned_cols=292 Identities=14% Similarity=0.103 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....++++++++++|++ + ++|++|+++|+.+++.++ .++|+.++ ....|.+ .. ..++..|+++..++.
T Consensus 99 ~~~~~le~~la~~~g~~--~--~~~~~sG~~An~~~l~~l-~~~g~~v~~~~~~h~s-~~----~~~~~~g~~~~~~~~- 167 (407)
T PRK07179 99 SPKPQFEKKLAAFTGFE--S--CLLCQSGWAANVGLLQTI-ADPNTPVYIDFFAHMS-LW----EGVRAAGAQAHPFRH- 167 (407)
T ss_pred hHHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHh-CCCCCEEEEECCcCHH-HH----HHHHHCCCeEEEecC-
Confidence 45678889999999984 2 788999999999999998 78899865 5555654 22 233456877655432
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC---C----CCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK---D----MDT 329 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~---d----~~~ 329 (588)
.|+++|+++|++ .++++|++.+++|+||.+.|+++| ++|+++|+++|+|+++..+. + +..
T Consensus 168 -----~d~~~l~~~l~~-------~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~ 235 (407)
T PRK07179 168 -----NDVDHLRRQIER-------HGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAE 235 (407)
T ss_pred -----CCHHHHHHHHHh-------cCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHh
Confidence 488999999971 257899999999999999999999 99999999999999987652 1 113
Q ss_pred CCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccc
Q 037063 330 LGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISG 409 (588)
Q Consensus 330 l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~ 409 (588)
+++. .++|+++.|++|.+| + ++|++++++++++.+...... + . ..+|.+...
T Consensus 236 ~~~~-~~vdi~~~S~sK~~g--~-~~G~l~~~~~~~~~~~~~~~~--~--------------------~--~~~t~~~~~ 287 (407)
T PRK07179 236 LGLT-SRVHFITASLAKAFA--G-RAGIITCPRELAEYVPFVSYP--A--------------------I--FSSTLLPHE 287 (407)
T ss_pred cCCC-CCCCEEEeechHhhh--c-cCeEEEeCHHHHHHHHHhCcC--e--------------------e--eCCCCCHHH
Confidence 3332 247999999999998 4 489999988776655322110 0 1 133444333
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcC
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRID 489 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~ 489 (588)
+ +++.++++.+... +...++++++++++++.|.++ ++++++ .++++.+.+.+. .+
T Consensus 288 ~---aa~~aal~~~~~~--~~~~~~l~~~~~~l~~~L~~~----------g~~v~~------~~~i~~l~~~~~----~~ 342 (407)
T PRK07179 288 I---AGLEATLEVIESA--DDRRARLHANARFLREGLSEL----------GYNIRS------ESQIIALETGSE----RN 342 (407)
T ss_pred H---HHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc----------CCCCCC------CCCEEEEEeCCH----HH
Confidence 3 4566778877553 567889999999999999885 233332 357877775431 12
Q ss_pred HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 490 PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 490 ~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
...+.+.|.++||.++ .+|.+... .+...||+|++.++|.|||++++++|++++++.
T Consensus 343 ~~~~~~~L~~~GI~~~--~~~~p~~~---------------------~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 343 TEVLRDALEERNVFGA--VFCAPATP---------------------KNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred HHHHHHHHHHCCceEe--eecCCCCC---------------------CCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 4567778888999854 34533210 122389999999999999999999999987763
No 56
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.92 E-value=1.5e-22 Score=213.05 Aligned_cols=318 Identities=11% Similarity=0.002 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....++++.+++++|.+ + +++++|+|+|+.+++.++.+++||+|++ ...|++. ...+...|++++.++++
T Consensus 18 ~~~~~~~~~la~~~~~~--~--~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~-----~~~~~~~g~~~~~~~~~ 88 (352)
T cd00616 18 PKVREFEKAFAEYLGVK--Y--AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT-----ANAILLLGATPVFVDID 88 (352)
T ss_pred HHHHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH-----HHHHHHcCCeEEEEecC
Confidence 45679999999999973 2 8889999999999999987789999664 5556542 23345679999999997
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFK 336 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~ 336 (588)
..++.+|+++++++++ +++++|++++ ++|...|+++| ++|+++|+++++|++|..+.....-.+.. .
T Consensus 89 ~~~~~~d~~~l~~~i~--------~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~-~ 156 (352)
T cd00616 89 PDTYNIDPELIEAAIT--------PRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGT-F 156 (352)
T ss_pred CCcCCcCHHHHHHhcC--------cCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEccc-C
Confidence 4378899999999887 6889998875 59999999999 99999999999999998762111100111 1
Q ss_pred CcEEEeccC--ccCCCCCCceEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc-chhh
Q 037063 337 PDFLICSFY--KIFGENPSGFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS-GVSS 412 (588)
Q Consensus 337 ~D~vv~S~~--K~~G~~P~G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~-~~~~ 412 (588)
.|+.++|+| |+++. +. .|+++.++ ++.+++++...++ ...... +| +..+..+. .+
T Consensus 157 ~d~~~~S~~~~K~~~~-~~-gg~~~~~~~~~~~~~~~~~~~~-~~~~~~---------------~~-~~~~~~~~~~~-- 215 (352)
T cd00616 157 GDAGAFSFHPTKNLTT-GE-GGAVVTNDEELAERARLLRNHG-RDRDRF---------------KY-EHEILGYNYRL-- 215 (352)
T ss_pred cceeEEcCCCCCCCcc-cC-ceEEEECCHHHHHHHHHHHHcC-CCCCCC---------------cc-ccceeeeccCc--
Confidence 588999987 98863 33 46677765 5666555433221 110000 01 11111100 11
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCC-CCcccEEEEEeecCCCCCcCHH
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVM-FDRGPSLAFNVFDWNGTRIDPA 491 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~-~~rg~iv~f~~~~~~g~~i~~~ 491 (588)
..+..++......+++.+.++.+++++++++.|.++ ++++++.+... ....++++|.+.+..+ .+..
T Consensus 216 -~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 283 (352)
T cd00616 216 -SEIQAAIGLAQLEKLDEIIARRREIAERYKELLADL---------PGIRLPDVPPGVKHSYHLYVIRLDPEAG--ESRD 283 (352)
T ss_pred -CHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCC---------CCccCCCCCCCCceeeEEEEEEECCcCC--CCHH
Confidence 111222222222246888899999999999999874 67888765432 1345688888764211 5688
Q ss_pred HHHHHHHhCCcEeccccccCcccccchHH----------HHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHH
Q 037063 492 LVQKLADRHNISLSCGFLQNIFFSGEYEQ----------ERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAF 561 (588)
Q Consensus 492 ~v~~~l~~~gI~v~~G~~c~~~~~~~~~~----------~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~ 561 (588)
.+.+.|.++||.++ .+|.+........ ..+..+. ...||++++.++|.|||+++++.
T Consensus 284 ~v~~~L~~~gI~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-----------~~~l~l~~~~~~t~~di~~i~~~ 350 (352)
T cd00616 284 ELIEALKEAGIETR--VHYPPLHHQPPYKKLLGYPPGDLPNAEDLA-----------ERVLSLPLHPSLTEEEIDRVIEA 350 (352)
T ss_pred HHHHHHHHCCCCee--eecCccccCHhhhhccCCCcCCChHHHHHH-----------hCeEEccCCCCCCHHHHHHHHHH
Confidence 89999999999665 4554432211000 0011111 13899999999999999999998
Q ss_pred HH
Q 037063 562 VS 563 (588)
Q Consensus 562 l~ 563 (588)
|+
T Consensus 351 l~ 352 (352)
T cd00616 351 LR 352 (352)
T ss_pred hC
Confidence 63
No 57
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.91 E-value=4.9e-22 Score=211.71 Aligned_cols=298 Identities=14% Similarity=0.145 Sum_probs=200.7
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCC-
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWP- 259 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~- 259 (588)
..++|+.+++++|+++++ |++|+|+|+|+.+++.++ ..+||+|++....+. +....++..|++++.++++.+
T Consensus 68 ~~~lr~~ia~~l~~~~~~--v~~~~g~t~al~~~~~~~-~~~gd~vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~~ 140 (380)
T PRK06225 68 FPELRELILKDLGLDDDE--ALITAGATESLYLVMRAF-LSPGDNAVTPDPGYL----IIDNFASRFGAEVIEVPIYSEE 140 (380)
T ss_pred hHHHHHHHHHhcCCCCCc--EEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCc----chHHHHHHhCceEEeecccccc
Confidence 458999999999998765 999999999999999998 789998765443322 223556778999999987422
Q ss_pred -CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCc--C-CC-CCCCC
Q 037063 260 -NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATAL--G-SK-DMDTL 330 (588)
Q Consensus 260 -~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~--~-~~-d~~~l 330 (588)
++.++++++++.++ ++++++++.+++|+||..++ +++| ++|+++|+++|+|++.. . +. ....+
T Consensus 141 ~~~~~d~~~l~~~~~--------~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~ 212 (380)
T PRK06225 141 CNYKLTPELVKENMD--------ENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEY 212 (380)
T ss_pred CCccCCHHHHHhhcC--------CCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhc
Confidence 35799999999887 67899999999999999998 5556 88999999999999842 1 10 01111
Q ss_pred CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 331 GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 331 ~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
+ ....+++.|++|++|.+..++|++++++++++.+.+...+ ..|+..+.+
T Consensus 213 ~---~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~~~--------------------------~~~~~~~~~- 262 (380)
T PRK06225 213 A---PEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVIN--------------------------DLGTNVIAQ- 262 (380)
T ss_pred C---CCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHHhc--------------------------ccCCCHHHH-
Confidence 1 1245778899999984223479999998887766543211 011111111
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEe-CCCCCCCcccEEEEEeecCCCCCcC
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIY-GPKVMFDRGPSLAFNVFDWNGTRID 489 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~-~p~~~~~rg~iv~f~~~~~~g~~i~ 489 (588)
++...+|+..... ++.+.+..+...+++.+.|.++ +++.+. .| ..+.++.+.+.+.. ++
T Consensus 263 ---~~a~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~~~----~~g~~~~~~~~~~~---~~ 322 (380)
T PRK06225 263 ---EAAIAGLKVKDEW-IDRIRRTTFKNQKLIKEAVDEI---------EGVFLPVYP----SHGNMMVIDISEAG---ID 322 (380)
T ss_pred ---HHHHHHHhcchHH-HHHHHHHHHHHHHHHHHHHHhC---------cCCccccCC----CCCeEEEEEccccc---CC
Confidence 2222344322222 3445555556667777777764 222211 12 23455555554311 45
Q ss_pred HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 490 PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 490 ~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
...+.+.|.++||.++.|..|.+. .|..++|+|++. +.||++++++.|+++++.
T Consensus 323 ~~~l~~~l~~~gi~v~~g~~~~~~-----------------------~~~~~iR~s~~~--~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 323 PEDLVEYLLERKIFVRQGTYTSKR-----------------------FGDRYIRVSFSI--PREQVEVFCEEFPDVVET 376 (380)
T ss_pred HHHHHHHHHHCCEEEcCCcccCcC-----------------------CCCceEEEEeCC--CHHHHHHHHHHHHHHHHH
Confidence 777887777899999988655210 223389999874 789999999999998764
No 58
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.91 E-value=6.2e-22 Score=207.98 Aligned_cols=296 Identities=13% Similarity=0.076 Sum_probs=203.1
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.+.++++++.+++++|++ + .++++++|+++.+++.++ +++||+|++. ..|++ . ...++..|++++.++.
T Consensus 45 ~~~~~~l~~~la~~~~~~--~--~iv~~sg~~a~~~~~~~~-~~~gd~Vl~~~~~~~~-~----~~~~~~~g~~~~~~~~ 114 (349)
T cd06454 45 SDLHEELEEELAEFHGKE--A--ALVFSSGYAANDGVLSTL-AGKGDLIISDSLNHAS-I----IDGIRLSGAKKRIFKH 114 (349)
T ss_pred chHHHHHHHHHHHHhCCC--C--EEEeccHHHHHHHHHHHh-cCCCCEEEEehhhhHH-H----HHHHHHcCCceEEecC
Confidence 567789999999999984 2 455556677877777777 7899997654 44443 2 2345667999887752
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC-CCC-----C
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK-DMD-----T 329 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~-d~~-----~ 329 (588)
++.+++++++++. ....++++|++++++|+||...|+++| ++|+++|+++|+|+++..+. ... .
T Consensus 115 ------~~~~~le~~i~~~---~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~ 185 (349)
T cd06454 115 ------NDMEDLEKLLREA---RRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEE 185 (349)
T ss_pred ------CCHHHHHHHHHHh---hccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhh
Confidence 4778899888721 112467899999999999999999999 99999999999999986541 000 1
Q ss_pred CCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccc
Q 037063 330 LGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISG 409 (588)
Q Consensus 330 l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~ 409 (588)
++.....+|+++.|+||.+| +.| |+++.++++++.+...... +...++.+...
T Consensus 186 ~~~~~~~~~i~~~s~sK~~~--~~g-G~i~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~ 238 (349)
T cd06454 186 FGGLTDDVDIIMGTLGKAFG--AVG-GYIAGSKELIDYLRSYARG------------------------FIFSTSLPPAV 238 (349)
T ss_pred hccccccCcEEEeechhhhc--ccC-CEEECCHHHHHHHHHhchh------------------------hhccCCCCHHH
Confidence 22233458999999999999 555 8888887776655432110 00122333333
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcC
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRID 489 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~ 489 (588)
+ +++.++|+++.+ .+.+.++...+++++.+.|.++ +++++++. .+.++.+.+.+ + .+
T Consensus 239 ~---~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~----------g~~~~~~~----~~~~~~~~~~~--~--~~ 295 (349)
T cd06454 239 A---AAALAALEVLQG--GPERRERLQENVRYLRRGLKEL----------GFPVGGSP----SHIIPPLIGDD--P--AK 295 (349)
T ss_pred H---HHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc----------CCcccCCC----CCcEEEEeCCC--h--HH
Confidence 2 566778887766 3677899999999999999875 23344431 23344444331 1 33
Q ss_pred HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 490 PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 490 ~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
...+.+.|.++||.++.+.... . ..+...||++++.++|.+||+++++.|+++
T Consensus 296 ~~~~~~~L~~~gI~~~~~~~~~----------------~-------~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 296 AVAFSDALLERGIYVQAIRYPT----------------V-------PRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred HHHHHHHHHhCCceEEEecCCc----------------c-------CCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 5667777777799987642110 0 011238999999999999999999998764
No 59
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.91 E-value=5.2e-22 Score=217.05 Aligned_cols=321 Identities=12% Similarity=0.058 Sum_probs=211.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHH--HHhCCCCCCC----eEE-EcCCCchhHHHHHHHHHHhcCCE
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLL--AESYPFYSNP----RLL-TVYDHENEAAALMIESSKKRGAR 250 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv--~~s~~~~~gd----~ll-~~~e~~s~~~~~~~~~a~~~G~~ 250 (588)
.+++.++++.+++++|++. ..+.-++|+++.+..+ +..+..++|| +|+ +...|++ .. ..++..|++
T Consensus 112 lel~~~~~~~la~l~G~~~--~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~-~~----~~~~~~G~~ 184 (481)
T PRK04366 112 LELMYELQEWLKEITGMDA--VTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGT-NP----ASAAMAGFK 184 (481)
T ss_pred HHHHHHHHHHHHHHhCCCc--eEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHh-HH----HHHHHcCCE
Confidence 5788999999999999962 2243344555444422 3333356665 665 4556654 22 235678999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCcc-CCHHHH-HHHHHcCcEEEEeCCCcCCCCCC
Q 037063 251 VSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGAR-YSYMWM-SVAAEKGWHVLLDATALGSKDMD 328 (588)
Q Consensus 251 v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~-~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~ 328 (588)
++.++++ .++.+|.++|+++++ ++|++|++++++ +||.. .|+++| ++||++|++++||+++.++. +.
T Consensus 185 vv~v~~~-~~~~~D~e~L~~~i~--------~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~-~g 253 (481)
T PRK04366 185 VVEIPSN-EDGLVDLEALKAAVG--------EDTAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAI-LG 253 (481)
T ss_pred EEEeecC-CCCCcCHHHHHhhcc--------cCCeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhh-cc
Confidence 9999997 678899999999998 789999999866 89987 589999 99999999999999987541 01
Q ss_pred CCCCCCCCCcEEEeccCccCCC----CCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc-cccccccCC
Q 037063 329 TLGLSLFKPDFLICSFYKIFGE----NPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL-DESSQSKFP 403 (588)
Q Consensus 329 ~l~l~~~~~D~vv~S~~K~~G~----~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~-~~~~f~e~G 403 (588)
.++...+++|++++++||+||. ++.|+|++++++++.+.+.+...+..|. .+.. .++.. ..+|+ +.+
T Consensus 254 ~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~-~~~l------~~~r~~~i~r~-~a~ 325 (481)
T PRK04366 254 KARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGD-RYRL------DYDRPKSIGRV-RAF 325 (481)
T ss_pred cCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCC-ceee------cccccccCCCc-ccc
Confidence 1233455699999999998763 1345789999999888776554321011 1100 11100 11244 555
Q ss_pred CCCccchhhHHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEe
Q 037063 404 ESSISGVSSKLVECKGLDHADALG---LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNV 480 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL~~l~~~G---~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~ 480 (588)
|.+. .++..+..++..+| +.++.++...++++++++|.++ ..+. + +. ..-..+.|..
T Consensus 326 t~~~------l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~---------~~~~-~-~~---~~~~~~~~~~ 385 (481)
T PRK04366 326 YGNF------GVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI---------YDLP-Y-DR---PCMHEFVLSG 385 (481)
T ss_pred cCch------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh---------Cccc-C-CC---CeeEEEEEEC
Confidence 5443 23446777777666 5577788889999999999884 1111 1 10 1111222221
Q ss_pred e--cCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHH
Q 037063 481 F--DWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRL 558 (588)
Q Consensus 481 ~--~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~l 558 (588)
. ..+| ++..++.+.|.++||.++.-.. + . .....+|+|++.++|.+|||+|
T Consensus 386 ~~~~~~g--~~~~~v~~~L~~~Gi~~~~~~~--p---------------~--------~~~~~l~is~~e~~t~edid~l 438 (481)
T PRK04366 386 KKLKETG--VRTLDIAKRLLDYGFHPPTIYF--P---------------L--------IVPEALMIEPTETESKETLDAF 438 (481)
T ss_pred ccccccC--CCHHHHHHHHHHCCccCCcccc--c---------------c--------ccCCeEEEcccCCCCHHHHHHH
Confidence 1 1112 4678888888999998652110 0 0 1112899999999999999999
Q ss_pred HHHHHHhhhhhhc
Q 037063 559 WAFVSRFLDADFV 571 (588)
Q Consensus 559 i~~l~~~l~~~~~ 571 (588)
++.|+++.++..-
T Consensus 439 ~~~l~~i~~~~~~ 451 (481)
T PRK04366 439 IAAMKQIAEEAKE 451 (481)
T ss_pred HHHHHHHHHHHHh
Confidence 9999998766543
No 60
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.91 E-value=9.9e-23 Score=216.24 Aligned_cols=315 Identities=13% Similarity=0.116 Sum_probs=197.4
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+++++++++++|++ + ++++++++.|+.+++. + +++||+|++ ...|.+ ....+...+++.|+++++++.
T Consensus 46 ~p~~~~le~~la~l~g~~---~-~l~~~sG~~al~~~l~-l-l~~Gd~Vl~~~~~y~~-~~~~~~~~~~~~G~~v~~vd~ 118 (378)
T TIGR01329 46 NPTRTALESLLAKLDKAD---R-AFAFSSGMAALDVITR-L-LNNGDEIIAGDDLYGG-TDRLLTQVVPRSGVVVVHVDT 118 (378)
T ss_pred ChHHHHHHHHHHHHhCCC---c-EEEECCHHHHHHHHHH-H-hCCCCEEEEcCCCchH-HHHHHHHHHHHcCcEEEEeCC
Confidence 445789999999999983 2 5555666779998776 5 799999765 456654 333335667788999999986
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
. |+++++++++ +++++|++++++|++|.+.|+++| ++||++|+++++|+++..+....+++ +
T Consensus 119 ~------d~~~le~~i~--------~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l~---~ 181 (378)
T TIGR01329 119 T------DLDKVKAALG--------PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNPLE---L 181 (378)
T ss_pred C------CHHHHHHhcC--------cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChhh---c
Confidence 3 7789998887 789999999999999999999999 99999999999999987774334443 3
Q ss_pred CCcEEEeccCccCCCCCCc--eEEEEEeCcch-hcccCCCC-CCCceEeeecCCCcccccccccccccccCCCCCccchh
Q 037063 336 KPDFLICSFYKIFGENPSG--FGCLFVKKSSA-SVLSGSTS-SVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVS 411 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~G~L~v~~~~~-~~l~~~~~-g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~ 411 (588)
++|++++|++|+++. |.+ .|+++++++.+ +++.+... +| +.. .++..
T Consensus 182 g~Di~v~S~tK~l~G-~~~~~~G~v~~~~~~~~~~~~~~~~~~G-~~~-------------------------~~~~a-- 232 (378)
T TIGR01329 182 GADIVYHSATKFLAG-HSDVMAGVLAVKGEEIAKKVYFLQNSTG-SGL-------------------------APFDC-- 232 (378)
T ss_pred CCcEEEEecceeccC-CccceeEEEEeCcHHHHHHHHHHHHhcC-CcC-------------------------CHHHH--
Confidence 589999999996652 666 89998876543 44543321 11 110 00000
Q ss_pred hHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH--HHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcC
Q 037063 412 SKLVECKGLDHADALGLILISNRARYLINWLANA--LMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRID 489 (588)
Q Consensus 412 ~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~--L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~ 489 (588)
..+..+++.+... +++..+....+++||.+. +.+..||.-+ ..|..++++... ...+++++|++.+ ..
T Consensus 233 --~l~~~~l~tl~~R-~e~~~~na~~la~~L~~~~~v~~v~~p~l~-~~p~~~l~~~~~-~g~~~~~sf~~~~-----~~ 302 (378)
T TIGR01329 233 --WLLLRGIKTLAIR-IEKQQENARAIAMFLSTHPRVKKVRYAGLP-SHPGFHLHFSQA-KGAGSVLSFETGS-----VA 302 (378)
T ss_pred --HHHHccCCCHHHH-HHHHHHHHHHHHHHHHhCCCccEEECCCCC-CCccHHHHHHhC-CCcceEEEEEECC-----HH
Confidence 1111233322221 344444444445544321 1111121111 123333333222 2467999999943 22
Q ss_pred -HHHHHHHHHhCCcEeccccc----cCcccccchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCCCCCHHHHHHHHHHH
Q 037063 490 -PALVQKLADRHNISLSCGFL----QNIFFSGEYEQERVRVLETRSGTNETRSGV--SVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 490 -~~~v~~~l~~~gI~v~~G~~----c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~~t~eDv~~li~~l 562 (588)
...+...|+..+|.++.|.. |+|.....+. ....... ..|+ +.||+|+|. ||++.|++-|
T Consensus 303 ~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~-~~~~~~~--------~~gi~~~liR~svGl----E~~~dl~~dl 369 (378)
T TIGR01329 303 LSKRLVEATKLFSITVSFGSVNSLISMPCFMSHAS-IPAEVRE--------ERGLPEDLVRLSVGI----EDVDDLISDL 369 (378)
T ss_pred HHHHHHHhCcCcccccCCCCCCceeeCCCcccccc-CCHHHHH--------hcCCCCCeEEEEecc----CCHHHHHHHH
Confidence 44566667777888888742 2222111110 0000011 1343 399999997 8899999998
Q ss_pred HHhhhh
Q 037063 563 SRFLDA 568 (588)
Q Consensus 563 ~~~l~~ 568 (588)
.+.|++
T Consensus 370 ~~al~~ 375 (378)
T TIGR01329 370 DIAFVT 375 (378)
T ss_pred HHHHHh
Confidence 887764
No 61
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=2.1e-22 Score=214.59 Aligned_cols=317 Identities=14% Similarity=0.090 Sum_probs=197.9
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEE
Q 037063 176 EESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSA 254 (588)
Q Consensus 176 ~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v 254 (588)
......+++++++++++|++ +.+++ ++++.|+.+++. + +++||+|+ +...|+++...+ ...+++.|++++++
T Consensus 51 ~~~p~~~~le~~lA~l~g~~---~~v~~-~sG~~ai~~~l~-~-l~~Gd~Vlv~~~~y~~~~~~~-~~~~~~~G~~v~~v 123 (390)
T PRK08064 51 SGNPTREALEDIIAELEGGT---KGFAF-ASGMAAISTAFL-L-LSKGDHVLISEDVYGGTYRMI-TEVLSRFGIEHTFV 123 (390)
T ss_pred CCChhHHHHHHHHHHHhCCC---CeEEE-CCHHHHHHHHHH-H-hCCCCEEEEccCccchHHHHH-HHHHHHcCCEEEEE
Confidence 33566789999999999985 23555 555778887776 5 78999965 556676544433 56677889999999
Q ss_pred eccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCC
Q 037063 255 EFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLS 333 (588)
Q Consensus 255 ~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~ 333 (588)
+.+ |.++++++++ ++|++|++++++|+||.+.|+++| ++|+++|+++++|+++..+....+++
T Consensus 124 ~~~------d~~~l~~~l~--------~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~~-- 187 (390)
T PRK08064 124 DMT------NLEEVAQNIK--------PNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPLD-- 187 (390)
T ss_pred CCC------CHHHHHHhcC--------CCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCchh--
Confidence 863 6788988887 789999999999999999999999 99999999999999977763223332
Q ss_pred CCCCcEEEeccCccCCCCCCc--eEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 334 LFKPDFLICSFYKIFGENPSG--FGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 334 ~~~~D~vv~S~~K~~G~~P~G--~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
+++|+++.|+||+++. +.| .|++++++ ++++.+++...++ |.. .+....
T Consensus 188 -~g~Divv~S~tK~~~G-~~~~laG~~v~~~~~~~~~l~~~~~~~-g~~-------------------------~~~~~a 239 (390)
T PRK08064 188 -LGADVVLHSATKFLAG-HSDVLAGLAVVKDEELAQKLYFLQNSF-GAV-------------------------LGVQDC 239 (390)
T ss_pred -hCCcEEEeecceeccC-CccceeEEEEeCCHHHHHHHHHHHHhc-CCC-------------------------CCHHHH
Confidence 3489999999998763 666 58888875 4555555433211 110 000000
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH--HHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCc
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANA--LMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~--L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i 488 (588)
..+..+++.+... +++..+....+++||.+. +.+..||.-+ +.|+.+++.. .....|++++|.+.+
T Consensus 240 ---~l~~~gl~tl~~R-~~~~~~~a~~la~~L~~~~~v~~v~yp~l~-~~p~~~~~~~-~~~g~gg~~sf~~~~------ 307 (390)
T PRK08064 240 ---WLVLRGLKTLHVR-LEHSSETANKIALYLQEHPKVQNVYYPGLQ-THLGFDIQQS-QATSAGAVLSFTLQS------ 307 (390)
T ss_pred ---HHHHcccCcHHHH-HHHHHHHHHHHHHHHhcCCCcceEECCCCC-CCccHHHHHH-hCCCcceEEEEEECC------
Confidence 1111333322211 344444444444444331 1122222110 0122222221 112467899999854
Q ss_pred CHHHHHHHHHhCCc---Eecccccc----CcccccchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCCCCCHHHHHHHH
Q 037063 489 DPALVQKLADRHNI---SLSCGFLQ----NIFFSGEYEQERVRVLETRSGTNETRSGV--SVVTAALGCLTNFEDTYRLW 559 (588)
Q Consensus 489 ~~~~v~~~l~~~gI---~v~~G~~c----~~~~~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~~t~eDv~~li 559 (588)
.+.+.++++..+| .++.|... .+.....+. ..... .. ..|+ +.||+|+|+++.++.|+.|.
T Consensus 308 -~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~-~~~~~-~~-------~~gi~~~liR~SvGle~~~dli~dl~ 377 (390)
T PRK08064 308 -EEAVRQFVSHVKLPVFAVSLGAVESILSYPAKMSHAA-MPKEE-RD-------ERGITDGLLRLSVGLENVDDLIADFE 377 (390)
T ss_pred -HHHHHHHHHhCCcceEcccCCCCcceeECCccccccc-CCHHH-HH-------hcCCCCCeEEEEeccCCHHHHHHHHH
Confidence 3467788888888 67777322 111100000 00000 01 1333 39999999999999999999
Q ss_pred HHHHHh
Q 037063 560 AFVSRF 565 (588)
Q Consensus 560 ~~l~~~ 565 (588)
++|+++
T Consensus 378 ~Al~~~ 383 (390)
T PRK08064 378 QALSYV 383 (390)
T ss_pred HHHHhc
Confidence 998874
No 62
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.90 E-value=3.8e-22 Score=209.74 Aligned_cols=284 Identities=14% Similarity=0.136 Sum_probs=202.6
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNL 261 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~ 261 (588)
.++|+.+++++++++++ |++|+|+++++.+++.++ .++||+|++....+. .....++..|++++.++++ +++
T Consensus 57 ~~lr~~ia~~~~~~~~~--i~~~~G~~~~l~~~~~~l-~~~gd~v~~~~p~y~----~~~~~~~~~g~~~~~~~~~-~~~ 128 (346)
T TIGR01141 57 AELKQALADYYGVDPEQ--ILLGNGSDEIIELLIRAF-LEPGDAVLVPPPTYS----MYEISAKIHGAEVVKVPLD-EDG 128 (346)
T ss_pred HHHHHHHHHHhCcChHH--EEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCCHH----HHHHHHHHcCCeEEEeccC-CCC
Confidence 58999999999987665 999999999999999998 789999776554433 2234567789999999987 567
Q ss_pred ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc--CcEEEEeCCCcC-CCCCCCCC-CCCCC
Q 037063 262 RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK--GWHVLLDATALG-SKDMDTLG-LSLFK 336 (588)
Q Consensus 262 ~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~--g~~vvvDaa~~~-~~d~~~l~-l~~~~ 336 (588)
.+|.+++++++. +++++|++++++|+||..+|++++ ++++.. |+++++|+++.. ..+-..+. +....
T Consensus 129 ~~d~~~l~~~~~--------~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~ 200 (346)
T TIGR01141 129 QLDLEDILVAID--------DKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYP 200 (346)
T ss_pred CCCHHHHHHhcC--------CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCC
Confidence 899999998876 689999999999999999999999 888876 999999999542 10001111 11122
Q ss_pred CcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHH
Q 037063 337 PDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVE 416 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al 416 (588)
.++++.|++|++|.++.++|++++++++++.+++..... + .+. .+.
T Consensus 201 ~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~-~---------------------------~~~------~~~ 246 (346)
T TIGR01141 201 NLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAPF-N---------------------------LSR------LAQ 246 (346)
T ss_pred CEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCCC-C---------------------------CCH------HHH
Confidence 457788999999743334899999888877665432110 0 010 111
Q ss_pred HHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHH
Q 037063 417 CKGLDHADAL-GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQK 495 (588)
Q Consensus 417 ~~aL~~l~~~-G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~ 495 (588)
..++..++.. .++++.++.+++++.+++.|.++ ++++++.+ .+.++.+.+.+ +.+.+.+
T Consensus 247 ~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~-----~g~~~~~~~~~------~~~~~~~ 306 (346)
T TIGR01141 247 AAAIAALRDDDFIEKTVEEINAERERLYDGLKKL---------PGLEVYPS-----DANFVLIRFPR------DADALFE 306 (346)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc---------CCCEECCC-----cCCEEEEecCC------CHHHHHH
Confidence 1223333222 26778888888999999999874 45665432 35677777653 3567777
Q ss_pred HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 496 LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 496 ~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
.|.++||.++.|.... . . .+.+|+|++ +.+|++++++.|+
T Consensus 307 ~L~~~gI~v~~g~~f~----------------~--------~-~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 307 ALLEKGIIVRDLNSYP----------------G--------L-PNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred HHHHCCeEEEeCCCcC----------------C--------C-CCeEEEecC---CHHHHHHHHHHhC
Confidence 7888999999874320 0 1 128999977 7999999998863
No 63
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=2.5e-21 Score=208.11 Aligned_cols=159 Identities=14% Similarity=0.106 Sum_probs=132.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
...+++++++++++.|+. + .++|+|+|+|+++++.++ +++||+|+ +..+|.+ ....+...+++.|++++++++
T Consensus 63 ~p~~~~le~~lA~l~g~~---~-av~~sSGt~Al~~al~~l-l~~Gd~Vi~~~~~y~~-t~~~~~~~l~~~Gi~v~~vd~ 136 (433)
T PRK08134 63 NPTVAVLEERVAALEGGV---G-AIATASGQAALHLAIATL-MGAGSHIVASSALYGG-SHNLLHYTLRRFGIETTFVKP 136 (433)
T ss_pred ChHHHHHHHHHHHHhCCC---c-EEEeCCHHHHHHHHHHHH-hCCCCEEEEeCCccHH-HHHHHHHHHhhCCeEEEEECC
Confidence 456789999999999984 2 799999999999999999 99999965 5667775 333334445678999999986
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ |+++++++|+ ++|++|++.+++|++|.+.|+++| ++||++|+++++|+++..|....++ .+
T Consensus 137 ~------d~~~l~~~i~--------~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl---~~ 199 (433)
T PRK08134 137 G------DIDGWRAAIR--------PNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPF---EH 199 (433)
T ss_pred C------CHHHHHHhcC--------CCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch---hc
Confidence 4 6899999998 789999999999999999999999 9999999999999999888433333 24
Q ss_pred CCcEEEeccCccCCCCCCc--eEEEEEe
Q 037063 336 KPDFLICSFYKIFGENPSG--FGCLFVK 361 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~G~L~v~ 361 (588)
++|+++.|.||++| |.| +|.+++.
T Consensus 200 GaD~vv~S~tK~l~--g~g~~~gG~v~~ 225 (433)
T PRK08134 200 GADLVYHSATKFLG--GHGTAIGGVLVD 225 (433)
T ss_pred CCCEEEeccccccC--CCCCceEEEEEe
Confidence 59999999999998 556 6777764
No 64
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=99.90 E-value=1e-24 Score=229.74 Aligned_cols=397 Identities=22% Similarity=0.196 Sum_probs=281.1
Q ss_pred HhhhccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhH
Q 037063 100 RAQDYFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESE 179 (588)
Q Consensus 100 R~~~f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~ 179 (588)
|+++|.++ + |||+++.+++++++.+...-........||||. +..++ ...+
T Consensus 14 r~~e~s~~--~---yldhag~tl~sesq~~g~~~~sq~~e~~nphs~-------------------~~ts~-----~l~~ 64 (728)
T KOG2142|consen 14 RDREFSRL--A---YLDHAGRTLFSESQLEGVAFQSQSSENANPHSH-------------------LGTSR-----SLAR 64 (728)
T ss_pred hhHHHHHH--H---HHHhhhhhhhhhcccchhhhhhhccccCCCccc-------------------ccchH-----HHHH
Confidence 77889887 3 999999999999999985433444455566542 22222 2378
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCe-E---EEcC-CCchhHHHHHHHHHHhcCCEEEEE
Q 037063 180 LESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPR-L---LTVY-DHENEAAALMIESSKKRGARVSSA 254 (588)
Q Consensus 180 ~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~-l---l~~~-e~~s~~~~~~~~~a~~~G~~v~~v 254 (588)
.++++|-+|.++++....+|.++||. .|+|+++++++||+-...+ + -++. .|-+++...|.. ...|.-+..+
T Consensus 65 ~v~Q~r~ril~~f~tta~dy~v~lp~-~t~al~~vae~fp~~s~tekid~lrs~~y~hls~s~~~~~~--~~~~~gl~sy 141 (728)
T KOG2142|consen 65 LVAQVRLRILALFNTTAFDYEVSLPA-LTEALKLVAEAFPFYSQTEKIDNLRSDEYGHLSSSGHLMRL--DYSGIGLFSY 141 (728)
T ss_pred HHHHHHHHHHHHhccccccccchhHH-HHHHHHHHHHhCccccccccccchhhhhhcccccccceeee--eeeccceEEe
Confidence 89999999999999999999999999 9999999999999754333 3 2333 332322212211 1223333333
Q ss_pred -ecc--CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCC
Q 037063 255 -EFA--WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTL 330 (588)
Q Consensus 255 -~~~--~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l 330 (588)
... |+....+ +-... .......|+..+.++|+.|.++-..-| .+.-..+|+++||++..+. ..+|
T Consensus 142 ~q~~~i~~~~~~s---ls~~~------~~ls~~~L~~g~a~~nfeg~kik~ri~d~L~ipe~~y~lldtaSrvS--af~L 210 (728)
T KOG2142|consen 142 SQTNEISDSEEFS---LSESE------ANLSEHSLFGGAAQSNFEGDKIKLRIMDRLNIPESEYVLLDTASRVS--AFPL 210 (728)
T ss_pred eeeeecccccccc---ccccc------cCcccchhcccchhcccccceeeeeeecccccCCceEEEEEeecccc--cccc
Confidence 111 1111111 11111 112467899999999999998554445 4444779999999999887 5788
Q ss_pred CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 331 GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 331 ~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
+++.+++|++.. ++|+||+ |+ |+|.+.++..+.. |+ ++.+..........+...-.++| +.||.++..+
T Consensus 211 daesy~f~~~~~-lltiFgy-et--gAvlv~~r~A~~~-----Gg-kt~sa~f~wp~~~l~s~~lkkr~-e~gk~~~kd~ 279 (728)
T KOG2142|consen 211 DAESYPFDFNPK-LLTIFGY-ET--GAVLVMNRSAELK-----GG-KTASAEFSWPMLYLLSEKLKKRF-EDGKLRFKDI 279 (728)
T ss_pred hHhhCCCcccch-heeecCC-Cc--hhhHHHhhhhHhh-----cC-ccceeecccchHHHHHHHHHHHH-hhccccccch
Confidence 999999999999 9999998 77 7777777665433 32 44443221110000000112478 9999999987
Q ss_pred hhHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCC--CCCCcccEEEEEeecCCCC
Q 037063 411 SSKLVECKGLDHADAL--GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPK--VMFDRGPSLAFNVFDWNGT 486 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~--G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~--~~~~rg~iv~f~~~~~~g~ 486 (588)
+.+..+++.+.++ |+..+..+...+++++.-.|+++.| |-|.+++|+.. .+...++++.|++...+|.
T Consensus 280 ---a~gl~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda~~l-----G~kdmd~yglS~f~Pdfqg~sf~fv~g~d~ps 351 (728)
T KOG2142|consen 280 ---AQGLFVFPTQSRVTGGMYSYSWMTLALANNWHVLLDALAL-----GPKDMDSYGLSLFQPDFQGPSFYFVFGRDDPS 351 (728)
T ss_pred ---hhheeccchHhhhcccchhHHHHHHHHhhhHHHHHhhhcc-----CcchHhhhhhhccCccceeeeEEEEeccCCCC
Confidence 5666777777776 5999999999999999999999877 45888888742 2456799999999988888
Q ss_pred CcCHHHHHHHHHhCCcEeccccccCcccccchHH----HHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHH
Q 037063 487 RIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQ----ERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 487 ~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~----~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l 562 (588)
.+...+|.+.+ -.||.+++||+||+|.+..+.+ .....+..+++|++. +|.+ +| |++.+.+|+..+..++
T Consensus 352 gfGcl~VkKs~-i~~l~lrtGcfcn~Gack~~pgl~~~~~~~~~~~g~~cgD~-dg~~---~s-~~~~~~~~~~a~~~~~ 425 (728)
T KOG2142|consen 352 GFGCLEVKKSA-ISGLELRTGCFCNIGACKIYPGLYLEMSQKGLSAGKGCGDN-DGQP---VS-GYMQTPADVGAYLSAQ 425 (728)
T ss_pred ceeeeeeehhh-hhceeccCCCCCCCcceeecccccHHHHHHHhhhccccccC-CCCc---cc-ccccchhhhhHHHHHh
Confidence 88888888888 8999999999999999887764 333445666778766 6666 78 9999999999999887
Q ss_pred HH
Q 037063 563 SR 564 (588)
Q Consensus 563 ~~ 564 (588)
.+
T Consensus 426 v~ 427 (728)
T KOG2142|consen 426 VS 427 (728)
T ss_pred hh
Confidence 54
No 65
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.4e-21 Score=206.00 Aligned_cols=286 Identities=12% Similarity=0.086 Sum_probs=197.2
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNL 261 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~ 261 (588)
.++|+.|++++++++++ |++|+|+++++.+++.++ +++||+|+++...+.+. ...++..|++++.++++ +++
T Consensus 63 ~~lr~aia~~~~~~~~~--I~it~G~~~al~~~~~~l-~~~gd~vlv~~P~y~~~----~~~~~~~g~~~~~v~~~-~~~ 134 (353)
T PRK05387 63 DALRQAIAAYYGLDPEQ--VFVGNGSDEVLAHAFLAF-FNHDRPLLFPDITYSFY----PVYAGLYGIPYEEIPLD-DDF 134 (353)
T ss_pred HHHHHHHHHHhCCCHHH--EEEcCCHHHHHHHHHHHh-cCCCCEEEEeCCCHHHH----HHHHHHcCCEEEEeecC-CCC
Confidence 58999999999998765 999999999999999999 89999977665544322 34456789999999987 567
Q ss_pred ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc-CcEEEEeCCCc--CCCCCCCCCCCCCCC
Q 037063 262 RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK-GWHVLLDATAL--GSKDMDTLGLSLFKP 337 (588)
Q Consensus 262 ~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~-g~~vvvDaa~~--~~~d~~~l~l~~~~~ 337 (588)
.+|.+++++ .+++|++++++||||..+|.+++ ++++.. ++++|+|.+.. .+....++ ++....
T Consensus 135 ~~d~~~l~~------------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~-~~~~~~ 201 (353)
T PRK05387 135 SIDVEDYLR------------PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPL-IDRYPN 201 (353)
T ss_pred CCCHHHHHh------------cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHH-HhhCCC
Confidence 788887752 34688999999999999999999 888775 99999999742 11111111 112235
Q ss_pred cEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHH
Q 037063 338 DFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVEC 417 (588)
Q Consensus 338 D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~ 417 (588)
.+++.|++|.+|.+..++|+++.++++++.+....... ...+.+.... .++.
T Consensus 202 ~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~-------------------------~~~~~~~~~q---~~~~ 253 (353)
T PRK05387 202 LLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSF-------------------------NSYPLDRLAQ---AGAI 253 (353)
T ss_pred EEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccC-------------------------CCCCcCHHHH---HHHH
Confidence 78999999988853456999999888777665332110 0011121111 2333
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHH
Q 037063 418 KGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLA 497 (588)
Q Consensus 418 ~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l 497 (588)
.+|+... .++++.+++.+.++++.+.|+++ +++++ | ..+.++.+.+.+ .+...+.+.|
T Consensus 254 ~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~-~----~~~~~~~~~~~~-----~~~~~~~~~l 311 (353)
T PRK05387 254 AAIEDEA--YFEETRAKVIATRERLVEELEAL----------GFEVL-P----SKANFVFARHPS-----HDAAELAAKL 311 (353)
T ss_pred HHhcCHH--HHHHHHHHHHHHHHHHHHHHHHC----------CCeEC-C----CcCcEEEEECCC-----CCHHHHHHHH
Confidence 4443211 14667777788888899988874 23443 2 234555555443 4567777778
Q ss_pred HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 498 DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 498 ~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
.++||.++. ++.+ ...++||+|++ +.+|++++++.|++++.
T Consensus 312 ~~~gi~v~~--~~~~------------------------~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 312 RERGIIVRH--FNKP------------------------RIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred HHCCEEEEE--CCCC------------------------CCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 889999873 2210 11128999987 67999999999988654
No 66
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.90 E-value=2.1e-21 Score=208.37 Aligned_cols=349 Identities=14% Similarity=0.084 Sum_probs=225.1
Q ss_pred CCCCCCCCHHHHHHhhhhcccC-cCCCCCCCCCCCCCCCCCcccccccccccccccccCCch-hHHHHHHHHHHHHHhCC
Q 037063 117 YIGHGLFSYSQMHSCSSNVHSS-AASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEE-SELESKIRKRIMDFMNI 194 (588)
Q Consensus 117 ~a~~gl~~~~~~~~~~~~~~~~-~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~-~~~~~~~r~~ia~~lga 194 (588)
+++-+++++.+.+++..++... ..++|.+ ....|... ..+++.+++.+++++|+
T Consensus 25 ~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~------------------------~~~~~~~~~~~l~~~~~~~~~~~~g~ 80 (402)
T cd00378 25 IASENFTSPAVMEAMGSDLTNKYAEGYPGK------------------------RYYGGCEYVDEIEDLAIERAKKLFGA 80 (402)
T ss_pred eccCCcCCHHHHHHhcccccccccCCCCCC------------------------cccCCchHHHHHHHHHHHHHHHHhCC
Confidence 4777788999999986655221 1234321 11112222 34444578889999999
Q ss_pred CCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCC--CCccCHHHHHHH
Q 037063 195 SEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWP--NLRIHSGKLMKK 271 (588)
Q Consensus 195 ~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~--~~~i~~e~l~~~ 271 (588)
+.. .|+++ |+|+|+.+++.++ +++||+|++ ..+|++....+....++..|+++..++++.. ++.+|+++++++
T Consensus 81 ~~~--~v~~~-sgt~a~~~~l~~l-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~ 156 (402)
T cd00378 81 EYA--NVQPH-SGSQANLAVYFAL-LEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKM 156 (402)
T ss_pred Cce--eeecC-CcHHHHHHHHHHh-cCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHH
Confidence 643 25555 5689999999999 899999664 4555432111211124567888888877543 688999999999
Q ss_pred HhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC---CCCCCCCCCCCCcEEEeccCcc
Q 037063 272 IVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK---DMDTLGLSLFKPDFLICSFYKI 347 (588)
Q Consensus 272 i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~---d~~~l~l~~~~~D~vv~S~~K~ 347 (588)
+.. ++++++++++.+ +|...|+++| ++|+++|++|++|++++.+. ......+. .+|++++|+||+
T Consensus 157 i~~-------~~~~~v~~~~~~--~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~ 225 (402)
T cd00378 157 ALE-------FKPKLIVAGASA--YPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKT 225 (402)
T ss_pred HHh-------CCCCEEEecCcc--cCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccC
Confidence 862 468898887765 4678899999 99999999999999976541 01112222 479999999997
Q ss_pred CCCCCCceEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHh
Q 037063 348 FGENPSGFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL 426 (588)
Q Consensus 348 ~G~~P~G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~ 426 (588)
|+. |.| |+++.++ ++++.+......+ ..+++.+..+ +++..++..+...
T Consensus 226 l~G-~~g-g~i~~~~~~~~~~l~~~~~~~-------------------------~~~~~~~~~~---~a~~~al~~~~~~ 275 (402)
T cd00378 226 LRG-PRG-GLILTRKGELAKKINSAVFPG-------------------------LQGGPHLHVI---AAKAVALKEALEP 275 (402)
T ss_pred CCC-CCc-eEEEeccHHHHHHHHHHhCcc-------------------------ccCCchHHHH---HHHHHHHHHHhhH
Confidence 742 665 6666666 7766654322110 1122222222 4555666655443
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEecc
Q 037063 427 GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSC 506 (588)
Q Consensus 427 G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~ 506 (588)
++++..+++.++++++.+.|.++ +++++... ..+.++.+.+.+. + .+...+.++|.++||.++.
T Consensus 276 ~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~---~~~~~v~v~~~~~-~--~~~~~~~~~l~~~gI~v~~ 339 (402)
T cd00378 276 EFKAYAKQVVENAKALAEALKER----------GFKVVSGG---TDNHLVLVDLRPK-G--ITGKAAEDALEEAGITVNK 339 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC----------CCeEeecC---CCCeEEEEeCCcc-C--CCHHHHHHHHHHcCcEEcC
Confidence 46778888999999999999874 34454221 2355666666532 1 3456778888999999976
Q ss_pred ccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCC----CHHHHHHHHHHHHHhhhhhh
Q 037063 507 GFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLT----NFEDTYRLWAFVSRFLDADF 570 (588)
Q Consensus 507 G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~----t~eDv~~li~~l~~~l~~~~ 570 (588)
+.+ |.... . ..+...+|++++..+ +.+||+++++.|+++++...
T Consensus 340 ~~~--p~~~~----------~--------~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~~~ 387 (402)
T cd00378 340 NTL--PWDPS----------S--------PFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDAE 387 (402)
T ss_pred CcC--CCCCC----------C--------CCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhccc
Confidence 422 11000 0 012238999998766 69999999999999876655
No 67
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.90 E-value=1.8e-21 Score=209.83 Aligned_cols=352 Identities=11% Similarity=0.020 Sum_probs=222.4
Q ss_pred CeeeecCCCCCCCCHHHHHHhhhhcccC-cCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH-HHHHHH
Q 037063 111 NYVCFDYIGHGLFSYSQMHSCSSNVHSS-AASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES-KIRKRI 188 (588)
Q Consensus 111 ~~vyLD~a~~gl~~~~~~~~~~~~~~~~-~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~-~~r~~i 188 (588)
+.+.|+ ++-+++|+.+++++..++... ..+++. +....|....+.++ .+|+.+
T Consensus 26 ~~~~l~-~~~n~~~~~v~~a~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~e~~~~~~l 80 (416)
T PRK00011 26 EHIELI-ASENFVSPAVMEAQGSVLTNKYAEGYPG------------------------KRYYGGCEYVDVVEQLAIDRA 80 (416)
T ss_pred cCeeee-cccCcCCHHHHHHHhchhhcccccCCCC------------------------ccccccchHHHHHHHHHHHHH
Confidence 444555 466668999999986654221 112221 11111222233344 478899
Q ss_pred HHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHH
Q 037063 189 MDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGK 267 (588)
Q Consensus 189 a~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~ 267 (588)
++++|++... |++++ +|+|+.+++.++ +++||+|++ ..+|.+....+........|++++.++++..++.+|+++
T Consensus 81 a~~~g~~~~~--i~~~s-gt~al~~~l~~l-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~ 156 (416)
T PRK00011 81 KELFGAEYAN--VQPHS-GSQANAAVYFAL-LKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDE 156 (416)
T ss_pred HHHhCCCcee--eecCC-chHHHHHHHHHh-cCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHH
Confidence 9999997532 66654 578999999999 899999664 445543111111112234578888888875567899999
Q ss_pred HHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCC---CCCCCCCCCCCcEEEec
Q 037063 268 LMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKD---MDTLGLSLFKPDFLICS 343 (588)
Q Consensus 268 l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d---~~~l~l~~~~~D~vv~S 343 (588)
++++++. .++++|++++ +.+|...|+++| ++|+++|+++++|+++..+.- ..+..+. .+|++++|
T Consensus 157 l~~~i~~-------~~~k~v~~~~--~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S 225 (416)
T PRK00011 157 VEKLALE-------HKPKLIIAGA--SAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTT 225 (416)
T ss_pred HHHHHHh-------cCCCEEEECC--CcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcEEEec
Confidence 9999972 3688888864 346788899999 999999999999999866521 1122232 48999999
Q ss_pred cCccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHH
Q 037063 344 FYKIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDH 422 (588)
Q Consensus 344 ~~K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~ 422 (588)
+||+++. |.| |+++.+ +++++.++..... + ..+++.... ++++..++..
T Consensus 226 ~~K~l~g-~~g-g~i~~~~~~~~~~l~~~~~~--~-----------------------~~~~~~~~~---~aa~~~a~~~ 275 (416)
T PRK00011 226 THKTLRG-PRG-GLILTNDEELAKKINSAVFP--G-----------------------IQGGPLMHV---IAAKAVAFKE 275 (416)
T ss_pred CCcCCCC-CCc-eEEEeCCHHHHHHHHHHhCc--c-----------------------ccCCccHHH---HHHHHHHHHH
Confidence 9997642 665 677765 4666655432211 0 011222222 2444455544
Q ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCc
Q 037063 423 ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNI 502 (588)
Q Consensus 423 l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI 502 (588)
+...+++.+.++.+++++++++.|.++ +++++. . ...++++.+.+.+. .++...+.+.|.++||
T Consensus 276 ~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~-~--~~~~~~~~i~~~~~---~~~~~~~~~~L~~~GI 339 (416)
T PRK00011 276 ALEPEFKEYAQQVVKNAKALAEALAER----------GFRVVS-G--GTDNHLVLVDLRSK---GLTGKEAEAALEEANI 339 (416)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhC----------CCeeee-c--CCCCeEEEEeCccc---CCCHHHHHHHHHHcCc
Confidence 434467888999999999999999885 345542 1 12346777766432 1456778888889999
Q ss_pred EeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCC----CCCHHHHHHHHHHHHHhhhh
Q 037063 503 SLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGC----LTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 503 ~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~----~~t~eDv~~li~~l~~~l~~ 568 (588)
.++.+..-.. .. . ..+...+|++... ..+.+||+++++.|++++..
T Consensus 340 ~v~~~~~p~~-~~------------~-------~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 340 TVNKNAVPFD-PR------------S-------PFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred EEccCcCCCC-CC------------C-------CCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 9875421100 00 0 0111268986533 34699999999999998765
No 68
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=8.2e-21 Score=202.19 Aligned_cols=287 Identities=13% Similarity=0.165 Sum_probs=199.8
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNL 261 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~ 261 (588)
.++|+.|++++|+++++ |++|+|+++++.+++.++ +++||+|++....+. .+ ...++..|++++.++.+ .++
T Consensus 89 ~~lr~~ia~~~~~~~~~--I~~t~Ga~~~i~~~~~~~-~~~gd~Vlv~~P~y~-~y---~~~~~~~g~~~~~v~~~-~~~ 160 (380)
T PLN03026 89 RRLRAALAEDSGLESEN--ILVGCGADELIDLLMRCV-LDPGDKIIDCPPTFG-MY---VFDAAVNGAEVIKVPRT-PDF 160 (380)
T ss_pred HHHHHHHHHHhCcChhh--EEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCChH-HH---HHHHHHcCCEEEEeecC-CCC
Confidence 58999999999998765 999999999999999998 799999776544433 22 34556789999999986 567
Q ss_pred ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCc--CCCCCCCCC-CCCCCC
Q 037063 262 RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATAL--GSKDMDTLG-LSLFKP 337 (588)
Q Consensus 262 ~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~--~~~d~~~l~-l~~~~~ 337 (588)
.++.++|++++.. +++++|++++++||||..+|.+++ ++++.. ++||+|.+.. ... ..... +.....
T Consensus 161 ~~d~~~l~~~~~~-------~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~-~~~~~~~~~~~~ 231 (380)
T PLN03026 161 SLDVPRIVEAVET-------HKPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQ-ESRMKWVKKYDN 231 (380)
T ss_pred CcCHHHHHHHHhc-------cCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCC-cchHHHHHhCCC
Confidence 7899999998831 679999999999999999999999 888754 8999999842 110 01111 122335
Q ss_pred cEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHH
Q 037063 338 DFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVEC 417 (588)
Q Consensus 338 D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~ 417 (588)
.+++.||.|.||.+..++|+++.++++++.+....... + .+... ..+..
T Consensus 232 viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~~~-~---------------------------~~~~~---q~aa~ 280 (380)
T PLN03026 232 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY-N---------------------------VSVAA---EVAAC 280 (380)
T ss_pred EEEEecchHhhcCccccceeeecCHHHHHHHHHhcCCC-C---------------------------CCHHH---HHHHH
Confidence 68899999999964566999999888776654332110 0 01111 12333
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHH
Q 037063 418 KGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLA 497 (588)
Q Consensus 418 ~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l 497 (588)
++|+.-. . +++..+++++.++++.+.|+++ +.+.++ | ..+..+.+.+.+ + ++...+.+.|
T Consensus 281 ~aL~~~~-~-~~~~~~~~~~~r~~l~~~L~~~---------~~~~~~-p----~~~~f~~~~~~~--~--~~~~~~~~~l 340 (380)
T PLN03026 281 AALSNPK-Y-LEDVKNALVEERERLFGLLKEV---------PFLEPY-P----SDANFILCRVTS--G--RDAKKLKEDL 340 (380)
T ss_pred HHhhCHH-H-HHHHHHHHHHHHHHHHHHHHHC---------CCCeEC-C----CCCeEEEEECCC--C--CCHHHHHHHH
Confidence 4453211 1 4556667777788888888875 334432 2 235566666542 1 3466677777
Q ss_pred HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 498 DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 498 ~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
.++||.|+.+... .+.+++|||++ +.+|+++|+++|+++
T Consensus 341 ~~~gI~v~~~~~~--------------------------~~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 341 AKMGVMVRHYNSK--------------------------ELKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred HHCCeEEEECCCC--------------------------CCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 7899999865210 11238999998 789999999998764
No 69
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.90 E-value=6.4e-21 Score=203.11 Aligned_cols=300 Identities=16% Similarity=0.167 Sum_probs=198.7
Q ss_pred HHHHHHHHHHHHHhC--CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 179 ELESKIRKRIMDFMN--ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 179 ~~~~~~r~~ia~~lg--a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++.+.+.+.+.+++| ++++ +|++|+|+++|+.+++..+ +++||+|++....+... ...++..|++++.++.
T Consensus 65 ~lr~~la~~~~~~~~~~~~~~--~i~~t~g~~~al~~~~~~l-~~~gd~vl~~~p~y~~~----~~~~~~~g~~~~~v~~ 137 (382)
T PRK06108 65 ELREALARYVSRLHGVATPPE--RIAVTSSGVQALMLAAQAL-VGPGDEVVAVTPLWPNL----VAAPKILGARVVCVPL 137 (382)
T ss_pred HHHHHHHHHHHHHhCCCcCcc--eEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCccch----HHHHHHCCCEEEEeeC
Confidence 444455555555557 5554 4999999999999999998 89999976543333212 3455678999999998
Q ss_pred cCC--CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcCC-----C
Q 037063 257 AWP--NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALGS-----K 325 (588)
Q Consensus 257 ~~~--~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~~-----~ 325 (588)
+.. ++.++.++|++.++ ++++++++++++|+||..+|.++ | ++|+++|+++|+|.+...- .
T Consensus 138 ~~~~~~~~~d~~~l~~~~~--------~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~ 209 (382)
T PRK06108 138 DFGGGGWTLDLDRLLAAIT--------PRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGG 209 (382)
T ss_pred CCCCCCccCCHHHHHHhcC--------ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCC
Confidence 632 34589999998887 67899999999999999998655 5 7889999999999983321 0
Q ss_pred CC-CCCCCCC-CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCC
Q 037063 326 DM-DTLGLSL-FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP 403 (588)
Q Consensus 326 d~-~~l~l~~-~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G 403 (588)
.. .-+++.. ....+++.|++|.||.++.++|++++++++++.+....... ..+
T Consensus 210 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~~-------------------------~~~ 264 (382)
T PRK06108 210 RAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIEYN-------------------------TSC 264 (382)
T ss_pred CCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHHhc-------------------------ccC
Confidence 00 1122211 12458899999988853456899999988877664332100 011
Q ss_pred CCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE-EEEeec
Q 037063 404 ESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL-AFNVFD 482 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv-~f~~~~ 482 (588)
++.+.+ .+...+|+...+. ++++.++++.+++++.+.|.++ ++++++.| .++++ .+.+.+
T Consensus 265 ~~~~~q----~a~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~p-----~~g~~~~~~l~~ 325 (382)
T PRK06108 265 VAQFVQ----RAAVAALDEGEDF-VAELVARLRRSRDHLVDALRAL---------PGVEVAKP-----DGAMYAFFRIPG 325 (382)
T ss_pred CChHHH----HHHHHHHhCChHH-HHHHHHHHHHHHHHHHHHHHhC---------CCCcccCC-----CeeEEEEEeCCC
Confidence 111111 2222333321111 4677888888889999998874 45666544 34433 344443
Q ss_pred CCCCCcCHHHHH-HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHH
Q 037063 483 WNGTRIDPALVQ-KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAF 561 (588)
Q Consensus 483 ~~g~~i~~~~v~-~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~ 561 (588)
. .+...+. ++++++||.+++|..+.+ .+.++||+|++. +.++++.+++.
T Consensus 326 ~----~~~~~~~~~ll~~~gV~v~pg~~f~~------------------------~~~~~~Ris~~~--~~~~l~~~l~~ 375 (382)
T PRK06108 326 V----TDSLALAKRLVDEAGLGLAPGTAFGP------------------------GGEGFLRWCFAR--DPARLDEAVER 375 (382)
T ss_pred C----CCHHHHHHHHHHhCCEEEeCchhhCC------------------------CCCCEEEEEecC--CHHHHHHHHHH
Confidence 1 2344554 456789999988743210 122389999997 88999999999
Q ss_pred HHHhhh
Q 037063 562 VSRFLD 567 (588)
Q Consensus 562 l~~~l~ 567 (588)
|+++++
T Consensus 376 l~~~l~ 381 (382)
T PRK06108 376 LRRFLA 381 (382)
T ss_pred HHHHHh
Confidence 988764
No 70
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.89 E-value=8.2e-21 Score=200.17 Aligned_cols=293 Identities=14% Similarity=0.109 Sum_probs=198.8
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....+++++.++++++.+ ..|++++|+++.+ .++.++ +++||+|++....+.... ..++..|++++.++.
T Consensus 60 ~~~~~~l~~~la~~~~~~---~~i~~~~G~~~~~-~~l~~~-~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~- 129 (360)
T TIGR00858 60 SPLHEELEEELAEWKGTE---AALLFSSGYLANV-GVISAL-VGKGDLILSDALNHASLI----DGCRLSGARVRRYRH- 129 (360)
T ss_pred cHHHHHHHHHHHHHhCCC---CEEEECchHHHHH-HHHHHh-CCCCCEEEEEccccHHHH----HHHHhcCCceEEecC-
Confidence 356788999999999963 3477777755544 566777 789999765443333122 334567888887753
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC-CCC------C
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK-DMD------T 329 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~-d~~------~ 329 (588)
+|.++|++.++. ....++++|+++++.|+||...|+++| ++|+++|+++|+|+++..+. ... .
T Consensus 130 -----~d~~~l~~~~~~----~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~ 200 (360)
T TIGR00858 130 -----NDVEHLERLLEK----NRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEH 200 (360)
T ss_pred -----CCHHHHHHHHHH----cccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHh
Confidence 478899998872 111357999999999999999999999 99999999999999976531 111 1
Q ss_pred CCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccc
Q 037063 330 LGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISG 409 (588)
Q Consensus 330 l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~ 409 (588)
.++.....|+++.|++|+|| +.| |+++.++++++.+...... . .+ ..++ +..+
T Consensus 201 ~~~~~~~~~i~i~s~sK~~~--~~g-G~~~~~~~~~~~~~~~~~~--~--------------------~~-~~~~-~~~~ 253 (360)
T TIGR00858 201 FGLKPEPVDIQVGTLSKALG--SYG-AYVAGSQALIDYLINRART--L--------------------IF-STAL-PPAV 253 (360)
T ss_pred cCCCccCCcEEEEechhhhh--ccC-cEEEcCHHHHHHHHHhCcc--c--------------------ee-cCCC-CHHH
Confidence 12222347899999999999 666 8988888777655422110 0 00 1111 1122
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcC
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRID 489 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~ 489 (588)
.+++.++++++... +++.+++..+++++.+.|.++ + ++++. ..++++.+.+... .+
T Consensus 254 ---~~a~~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~-------~---~~~~~-----~~~~~~~~~~~~~----~~ 309 (360)
T TIGR00858 254 ---AAAALAALELIQEE--PWRREKLLALIARLRAGLEAL-------G---FTLMP-----SCTPIVPVIIGDN----AS 309 (360)
T ss_pred ---HHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHc-------C---CccCC-----CCCCEEEEEeCCH----HH
Confidence 24555777766543 677889999999999999885 1 33332 2466777776431 23
Q ss_pred HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 490 PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 490 ~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
...+.+.|.++||.++.+.... . ..|..+||+|++.+++.+|++++++.|+
T Consensus 310 ~~~~~~~l~~~gI~v~~~~~~~----------------~-------~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 310 ALALAEELQQQGIFVGAIRPPT----------------V-------PAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred HHHHHHHHHHCCeeEeeeCCCC----------------C-------CCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 4567777778899997642210 0 0122389999999999999999998863
No 71
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=1.6e-20 Score=197.96 Aligned_cols=287 Identities=13% Similarity=0.100 Sum_probs=198.4
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
..++|+.|++++++++++ |++|+|+++++.+++.++ +++||+|++....+. .....++..|++++.++++ ++
T Consensus 61 ~~~lr~~ia~~~~~~~~~--i~it~G~~~~l~~~~~~l-~~~gd~Vlv~~p~y~----~~~~~~~~~g~~~~~v~~~-~~ 132 (351)
T PRK14807 61 AEKLREELARYCSVVPTN--IFVGNGSDEIIHLIMLAF-INKGDVVIYPHPSFA----MYSVYSKIAGAVEIPVKLK-ED 132 (351)
T ss_pred HHHHHHHHHHHhCCCccc--EEEecCHHHHHHHHHHHh-cCCCCEEEEeCCChH----HHHHHHHHcCCeEEEeecC-CC
Confidence 368999999999998765 999999999999999998 899999776543322 2245667789999999987 56
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcC--CCCCCCCCCCCCCC
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALG--SKDMDTLGLSLFKP 337 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~--~~d~~~l~l~~~~~ 337 (588)
+.++.++++++++. .+++++++++++||||..+|.+++ +++++++.++|+|.+..- +....++ +....-
T Consensus 133 ~~~d~~~l~~~~~~-------~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~-~~~~~~ 204 (351)
T PRK14807 133 YTYDVGSFIKVIEK-------YQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDV-INEFEN 204 (351)
T ss_pred CCCCHHHHHHHhhc-------cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHH-hhhCCC
Confidence 77999999999871 378999999999999999999999 999988888999998532 2111111 112224
Q ss_pred cEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHH
Q 037063 338 DFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVEC 417 (588)
Q Consensus 338 D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~ 417 (588)
.+++.|++|.+|.+..++|+++.++++++.+...... +. +..+.+ .++.
T Consensus 205 vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~--~~-------------------------~~~~~q----~~~~ 253 (351)
T PRK14807 205 LIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSP--YN-------------------------INSLSQ----VIAL 253 (351)
T ss_pred EEEEecchHhcccchhceeeeecCHHHHHHHHHccCC--CC-------------------------cCHHHH----HHHH
Confidence 5888999999985456799999888877766432211 00 011111 1222
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHH
Q 037063 418 KGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLA 497 (588)
Q Consensus 418 ~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l 497 (588)
..| ....+++..++.+..++++.+.|.++ +++.++. ..++.+-+.+.+ ...+.+.|
T Consensus 254 ~~l---~~~~~~~~~~~~~~~r~~l~~~l~~~---------~g~~~~~-----~~~~~~~i~~~~-------~~~~~~~l 309 (351)
T PRK14807 254 KVL---RTGVLKERVNYILNERERLIKELSKI---------PGIKVYP-----SKTNFILVKFKD-------ADYVYQGL 309 (351)
T ss_pred HHH---hHHHHHHHHHHHHHHHHHHHHHHHhC---------CCcEECc-----CCccEEEEEcCC-------HHHHHHHH
Confidence 333 22124555556666777788888763 4565542 234444444432 56677788
Q ss_pred HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 498 DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 498 ~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
.++||.|+.+... ..+.+++|+|++ +.++.++|++.|++++
T Consensus 310 ~~~gV~v~~~~~~-------------------------~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 310 LERGILVRDFSKV-------------------------EGLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred HHCCEEEEECCCC-------------------------CCCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 8889999753110 011128999987 6899999999998764
No 72
>PRK09105 putative aminotransferase; Provisional
Probab=99.89 E-value=7.7e-21 Score=201.63 Aligned_cols=320 Identities=12% Similarity=0.085 Sum_probs=214.1
Q ss_pred CCeeeecCCCCCC-CCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGL-FSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRI 188 (588)
Q Consensus 110 ~~~vyLD~a~~gl-~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~i 188 (588)
++.++||.+..++ .|+.+++++.+.+.. . + .|+. .. ..++|+.|
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~--~-----------------------------~Y~~--~~-~~~Lr~ai 87 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAAL-S--G-----------------------------RYDL--EL-EDDLRTLF 87 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHH-h--c-----------------------------CCCC--ch-HHHHHHHH
Confidence 5779999988764 577778877544311 0 0 0111 12 56899999
Q ss_pred HHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHH
Q 037063 189 MDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKL 268 (588)
Q Consensus 189 a~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l 268 (588)
++++|+++++ |++|+|+++++.+++.++ .++||+|++....+. .+ ...++..|++++.++.+ +++.++.+++
T Consensus 88 a~~~~v~~e~--I~it~Gs~~ai~~~~~~l-~~~gd~Vli~~P~y~-~~---~~~~~~~g~~~~~v~~~-~~~~~d~~~l 159 (370)
T PRK09105 88 AAQEGLPADH--VMAYAGSSEPLNYAVLAF-TSPTAGLVTADPTYE-AG---WRAADAQGAPVAKVPLR-ADGAHDVKAM 159 (370)
T ss_pred HHHhCcChhh--EEEcCChHHHHHHHHHHH-cCCCCEEEEeCCChH-HH---HHHHHHcCCeEEEecCC-CCCCCCHHHH
Confidence 9999998775 999999999999999999 889999775544433 12 44667889999999987 5677888888
Q ss_pred HHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH--cCcEEEEeCCCc-CCCCCCCCCCCCCCCc-EEEec
Q 037063 269 MKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE--KGWHVLLDATAL-GSKDMDTLGLSLFKPD-FLICS 343 (588)
Q Consensus 269 ~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~--~g~~vvvDaa~~-~~~d~~~l~l~~~~~D-~vv~S 343 (588)
++. . ++++++++++++||||..+|.++| ++++. +|+++|+|.+.. ........++.....+ +++.|
T Consensus 160 ~~~-~--------~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~S 230 (370)
T PRK09105 160 LAA-D--------PNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRT 230 (370)
T ss_pred Hhc-C--------CCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEec
Confidence 765 3 568999999999999999999998 66543 489999999852 1101111222122245 55669
Q ss_pred cCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHH
Q 037063 344 FYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHA 423 (588)
Q Consensus 344 ~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l 423 (588)
++|.||.+..++|+++.++++++.+.... . .. .+... ..+...+|+.-
T Consensus 231 fSK~~g~~GlRiG~~v~~~~~i~~l~~~~-~--~~--------------------------~~~~~---~~aa~~~L~~~ 278 (370)
T PRK09105 231 FSKLYGMAGMRLGLAAARPDLLAKLARFG-H--NP--------------------------LPVPA---AAAGLASLRDP 278 (370)
T ss_pred ccHhhcCCccceeeeecCHHHHHHHHhcC-C--CC--------------------------cCHHH---HHHHHHHHhCH
Confidence 99999954445999999988887665431 1 00 01111 12223344321
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcE
Q 037063 424 DALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNIS 503 (588)
Q Consensus 424 ~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~ 503 (588)
.. ++...++.+..++++.+.|.++ +++++.+ .++++.+.+. .+...+.+.|.++||.
T Consensus 279 -~~-~~~~~~~~~~~r~~l~~~L~~~----------g~~~~~~-----~~~f~~~~~~------~~~~~l~~~L~~~gI~ 335 (370)
T PRK09105 279 -KL-VPQRRAENAAVREDTIAWLKKK----------GYKCTPS-----QANCFMVDVK------RPAKAVADAMAKQGVF 335 (370)
T ss_pred -HH-HHHHHHHHHHHHHHHHHHHHHC----------CCCcCCC-----CCcEEEEeCC------CCHHHHHHHHHHCCcE
Confidence 11 4666677888888899998874 2344332 3455544332 2355666666677999
Q ss_pred eccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 504 LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 504 v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
++.+ +. ...+++|+|++ +.+++++|+++|++++
T Consensus 336 v~~~--~~-------------------------~~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 336 IGRS--WP-------------------------IWPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred EecC--CC-------------------------CCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 8433 10 11128999988 6899999999998765
No 73
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.89 E-value=8.8e-21 Score=200.54 Aligned_cols=284 Identities=12% Similarity=0.158 Sum_probs=193.9
Q ss_pred HHHHHHHHHHhCCCCCCceEEE-ecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVF-TANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvf-t~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
.++|+.+++++|+++++ |++ |+|+++++.+++.++ +++||+|++...++. .....++..|++++.++.+ .+
T Consensus 72 ~~lr~~ia~~~~~~~~~--i~~~~~Ga~~~i~~~~~~~-~~~gd~vlv~~p~y~----~~~~~~~~~g~~~~~~~~~-~~ 143 (361)
T PRK00950 72 PELREALSKYTGVPVEN--IIVGGDGMDEVIDTLMRTF-IDPGDEVIIPTPTFS----YYEISAKAHGAKPVYAKRE-ED 143 (361)
T ss_pred HHHHHHHHHHhCCCHHH--EEEeCCCHHHHHHHHHHHh-cCCCCEEEEcCCChH----HHHHHHHHcCCEEEEeecC-CC
Confidence 68999999999998765 888 788899999999988 789999876655433 2234567789999999875 56
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcC--CCCCCCCCCCCCCC
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALG--SKDMDTLGLSLFKP 337 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~--~~d~~~l~l~~~~~ 337 (588)
+.++++++++.++ ++++++++++++|+||..+|+++| ++|+++|+++++|+++.. +.+...+ +.....
T Consensus 144 ~~~~~~~l~~~~~--------~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~-~~~~~~ 214 (361)
T PRK00950 144 FSLDVDSVLNAIT--------EKTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPL-ALEYDN 214 (361)
T ss_pred CCcCHHHHHHHhc--------cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHH-HHhcCC
Confidence 6899999999887 678999999999999999999999 999999999999999642 1111111 111123
Q ss_pred cEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHH
Q 037063 338 DFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVEC 417 (588)
Q Consensus 338 D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~ 417 (588)
-+++.|+.|.+|.+..++|++++++++++.+...... + + .+ . .+..
T Consensus 215 vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~------------------------~---~-~~--~----~~~~ 260 (361)
T PRK00950 215 LIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYMRAKTP------------------------F---S-LT--R----LSQA 260 (361)
T ss_pred EEEEEeehHhhcCchhhcchhcCCHHHHHHHHHhcCC------------------------C---C-CC--H----HHHH
Confidence 4677899999984334589999888777655432211 0 0 01 0 1111
Q ss_pred HHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHH
Q 037063 418 KGLDHADALG-LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKL 496 (588)
Q Consensus 418 ~aL~~l~~~G-~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~ 496 (588)
.++..+...+ +++..++.+.+++++.+.|. ++++ | ..+.++.+.+.. ++...+.+.
T Consensus 261 ~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~-------------~~~~-~----~~~~~i~~~~~~-----~~~~~~~~~ 317 (361)
T PRK00950 261 AAIAALSDKEYIEKSIEHGIKSREYLYNELP-------------FKVY-P----SEANFVLVDVTP-----MTAKEFCEE 317 (361)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC-------------eeEC-C----CcceEEEEECCC-----CCHHHHHHH
Confidence 2233332222 34455555555555544432 3333 2 234566666632 457777777
Q ss_pred HHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 497 ADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 497 l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
|.++||.++.|.... ..+.+.||+|++ +.+|++++++.|++++
T Consensus 318 l~~~gv~v~~~~~f~------------------------~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 318 LLKRGVIVRDCTSFR------------------------GLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred HHHCCEEEeeCCccC------------------------CCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 778899998763210 012238999988 7899999999999875
No 74
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.89 E-value=1.2e-20 Score=196.33 Aligned_cols=345 Identities=13% Similarity=0.122 Sum_probs=240.7
Q ss_pred CCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHhCCCC
Q 037063 117 YIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFMNISE 196 (588)
Q Consensus 117 ~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~lga~~ 196 (588)
.+|-+.+|..|++++.+++.. +.+. +++...+++++. .-.++++++++.+.++|+++
T Consensus 9 ~aGPa~lp~~Vl~~~~~~~~~--~~~~----------g~si~eisHRs~----------~F~~i~~~~~~~Lr~Ll~~P- 65 (364)
T PRK12462 9 SGGPGALPDTVLEQVRQAVVE--LPET----------GLSVLGMSHRSS----------WFSSLLAQAEADLRDLLGIP- 65 (364)
T ss_pred cCCCcCCCHHHHHHHHHHHhc--cccc----------CccccccccccH----------HHHHHHHHHHHHHHHHhCCC-
Confidence 477778899999998766532 1110 222333444321 12789999999999999995
Q ss_pred CCceEEEec-CHHHHHHHHHHhCCCCCCCe-E-EEcCCCchhHHHHHHHHHHhcCCEEEEEeccCC---CCccCHHHHHH
Q 037063 197 DDYTLVFTA-NQSSAFKLLAESYPFYSNPR-L-LTVYDHENEAAALMIESSKKRGARVSSAEFAWP---NLRIHSGKLMK 270 (588)
Q Consensus 197 ~e~~vvft~-g~T~al~lv~~s~~~~~gd~-l-l~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~---~~~i~~e~l~~ 270 (588)
++|.|+|.+ |+|.++..+..++ +.+|++ + +....+.+ -.| .+.|++.| ++..+...+. ...++++++
T Consensus 66 ~~y~Vlfl~GggT~~~ea~~~Nl-l~~g~~~~~~~~tG~fg--~r~-~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~-- 138 (364)
T PRK12462 66 DEYGVVFLQGGSSLQFSMIPMNF-SRPGAAAPEYVTTGYWS--RKA-IGEASRVA-AMRVVWDGAASGYRTLPSLAEL-- 138 (364)
T ss_pred CCCeEEEEeccHHHHHHHHHHHc-CCCCCcEEEEEeCCHHH--HHH-HHHHHhcC-CceEecCcCCCCCCcCCCHHHh--
Confidence 557776665 5899999999999 889996 4 45566654 445 56777777 5655543211 122344443
Q ss_pred HHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccCCC
Q 037063 271 KIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIFGE 350 (588)
Q Consensus 271 ~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~G~ 350 (588)
.+. ++.+.|.+++..+.||+.+| ++ .+.+++++++|+++.++ ..+++++++ |+++++.+|.+|
T Consensus 139 ~~~--------~d~~~v~~t~NETstGv~~~--~~--~~~~~~llvvD~sS~~~--s~pid~~~~--dvi~agsQKnlg- 201 (364)
T PRK12462 139 DWD--------ARAPFRHYVSNETVEGLQFP--DA--AGLPDSPLIADMSSDFM--SRPFDVEAY--GMVYAHAQKNLG- 201 (364)
T ss_pred ccC--------CCCcEEEEccCCCCceEecC--cc--cccCCCeEEEEcCchhh--CCCCChHHc--cEEEeeccccCC-
Confidence 122 46788999999999999998 32 23368999999998887 577888875 999999999999
Q ss_pred CCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHh--CH
Q 037063 351 NPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL--GL 428 (588)
Q Consensus 351 ~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~--G~ 428 (588)
|.|+++++++++++++..+... .+.++. ...+ ... -.-||+...+ +++..+|+++.+. |+
T Consensus 202 -P~Gltvvivs~~al~~~~~~~p---~~ldy~------~~~~-~~s----~~nTPpv~~i---y~l~~~l~~i~~e~GGl 263 (364)
T PRK12462 202 -PAGVTVAIIRRALLERVPDTLP---PMLDFR------THVE-HRS----NYNTPPVFAI---YVMALVLRWIRDEIGGV 263 (364)
T ss_pred -CCceEEEEECHHHHhhccccCC---chhhHH------HHHh-cCC----CCCCchHHHH---HHHHHHHHHHHHhccCH
Confidence 7899999999999877654321 111100 0000 000 1227777665 8999999999876 89
Q ss_pred HHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc-cEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccc
Q 037063 429 ILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG-PSLAFNVFDWNGTRIDPALVQKLADRHNISLSCG 507 (588)
Q Consensus 429 ~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg-~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G 507 (588)
+.+.+|.+++++.+++.+.++ +++.. .+..+..|+ -.|+|.+.+.. + ...+.+.++++|+.-..|
T Consensus 264 ~~~~~r~~~ka~~ly~~id~~---------~~~~~-~~~~~~~RS~mnv~f~~~~~~---l-~~~f~~~a~~~gl~~lkG 329 (364)
T PRK12462 264 HAMRDINARKAAMLYATLDAL---------NEVID-CHAHRAARSTMNVAFRFRQPR---L-DTLFKEQSTEAGFCGLSG 329 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHhC---------CCccc-CCCChhhcCcceEEEEcCCHH---H-HHHHHHHHHHCCCccccC
Confidence 999999999999999999985 32221 122334565 57778876631 2 345677788899976555
Q ss_pred cccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 508 FLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 508 ~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+- ..| .+|+|+--..+.|+|++|++|+++|-++
T Consensus 330 hr--------------------------~vg--g~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 330 HR--------------------------SIG--GIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred Cc--------------------------ccC--ceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 21 133 7999999889999999999999998654
No 75
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.89 E-value=2.5e-20 Score=198.44 Aligned_cols=295 Identities=14% Similarity=0.072 Sum_probs=197.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....+++++.++++++. ++ .++++++++++..++..+ +++||+|++...+|.... ..++..|++++.++.
T Consensus 83 ~~~~~~l~~~la~~~~~-~~---~i~~~~g~~~~~~~l~~~-~~~gd~V~~~~~~~~~~~----~~~~~~g~~~~~~~~- 152 (385)
T PRK05958 83 SPAHEALEEELAEWFGA-ER---ALLFSSGYAANLAVLTAL-AGKGDLIVSDKLNHASLI----DGARLSRARVRRYPH- 152 (385)
T ss_pred cHHHHHHHHHHHHHhCC-Cc---EEEECcHHHHHHHHHHHh-CCCCCEEEEeCccCHHHH----HHHHhcCCceEEeCC-
Confidence 45678999999999995 22 444455566666666777 899999765444333122 234557888888764
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC-CCC------C
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK-DMD------T 329 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~-d~~------~ 329 (588)
.|.+++++.++. ..+++.++++.++.|++|...|+++| ++|+++|+++|+|+++..+. ... .
T Consensus 153 -----~d~~~l~~~i~~-----~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~ 222 (385)
T PRK05958 153 -----NDVDALEALLAK-----WRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAE 222 (385)
T ss_pred -----CCHHHHHHHHHh-----ccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHh
Confidence 377899998872 11247888888999999999999999 99999999999999986431 100 0
Q ss_pred CCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccc
Q 037063 330 LGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISG 409 (588)
Q Consensus 330 l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~ 409 (588)
.++.....++++.|++|++| +.| |+++.++++.+.+...... . .+ .. ..+..+
T Consensus 223 ~~~~~~~~~i~~~s~sK~~~--~~G-g~~~~~~~~~~~~~~~~~~--~--------------------~~-~~-~~~~~~ 275 (385)
T PRK05958 223 AGLAGEPDVILVGTLGKALG--SSG-AAVLGSETLIDYLINRARP--F--------------------IF-TT-ALPPAQ 275 (385)
T ss_pred hCCCCCCceEEEEechhhcc--cCC-cEEEcCHHHHHHHHHhCcc--c--------------------ee-cC-CCCHHH
Confidence 12322334588999999999 556 8888887766544321100 0 00 11 122222
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcC
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRID 489 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~ 489 (588)
. +++.++++.+... +.+.+++..+++++.+.|.++ | ++++. ..++++.|.+.+. .+
T Consensus 276 ~---aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~-------~---~~~~~-----~~~~~~~~~~~~~----~~ 331 (385)
T PRK05958 276 A---AAARAALRILRRE--PERRERLAALIARLRAGLRAL-------G---FQLMD-----SQSAIQPLIVGDN----ER 331 (385)
T ss_pred H---HHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-------C---CCcCC-----CCCCEEEEEeCCH----HH
Confidence 2 4555777777653 678889999999999999875 2 33332 2467888876531 23
Q ss_pred HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 490 PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 490 ~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
...+.+.|.++||.++.+.... . ..|..+||+|++.+++.+|++++++.|+++|
T Consensus 332 ~~~~~~~l~~~gI~v~~~~~~~----------------~-------~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 332 ALALAAALQEQGFWVGAIRPPT----------------V-------PAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred HHHHHHHHHHCCceEecccCCC----------------C-------CCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 4556777777899997531110 0 0122389999999999999999999998764
No 76
>PLN02483 serine palmitoyltransferase
Probab=99.88 E-value=2.3e-20 Score=204.21 Aligned_cols=308 Identities=12% Similarity=0.116 Sum_probs=204.8
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....+++++.||+++|.+ +.|+|++|.... ..++.++ +++||+|+++...|.... ..++..|++++.++.+
T Consensus 145 ~~~~~ele~~lA~~~g~~---~ai~~~~G~~an-~~~i~al-~~~Gd~Vi~d~~~h~s~~----~~~~~~Ga~v~~~~~~ 215 (489)
T PLN02483 145 TKLHRELEELVARFVGKP---AAIVFGMGYATN-STIIPAL-IGKGGLIISDSLNHNSIV----NGARGSGATIRVFQHN 215 (489)
T ss_pred cHHHHHHHHHHHHHhCCC---cEEEECCHHHHH-HHHHHHh-CCCCCEEEEcchhhHHHH----HHHHHcCCeEEEEeCC
Confidence 567889999999999963 358887765544 4666677 899999876655444233 3456789999998864
Q ss_pred CCCCccCHHHHHHHHhhhc----cccCCCc-ceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCC-----
Q 037063 258 WPNLRIHSGKLMKKIVGKR----KKKKKKK-RGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKD----- 326 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~----~~~~~~~-t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d----- 326 (588)
+.+++++.+.+.. .+...+. ..+|++.++.|++|.+.++++| ++|+++|+++++|+++..+..
T Consensus 216 ------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~ 289 (489)
T PLN02483 216 ------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGR 289 (489)
T ss_pred ------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCC
Confidence 4677777665210 0000111 2477888889999999999999 999999999999999875410
Q ss_pred --CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 327 --MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 327 --~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
..-+++....+|+++.|++|.|| +.| |+++.++++++.+.....+. . ..++
T Consensus 290 g~~~~~~v~~~~~dI~~~SfSKs~g--~~G-G~i~~~~~li~~l~~~~~~~----------------------~--~~~~ 342 (489)
T PLN02483 290 GVCELLGVDPADVDIMMGTFTKSFG--SCG-GYIAGSKELIQYLKRTCPAH----------------------L--YATS 342 (489)
T ss_pred chHHhcCCCcccCcEEEEecchhcc--cCc-eEEEcCHHHHHHHHHhCccc----------------------c--ccCC
Confidence 11233333357999999999999 566 99999998888776433210 0 0111
Q ss_pred CCccchhhHHHHHHHHHHHHHh-C---HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEe
Q 037063 405 SSISGVSSKLVECKGLDHADAL-G---LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNV 480 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~-G---~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~ 480 (588)
.+.... +++.++|+.+... | ..+..+++++.++++++.|+++ ++.++++ ..++++.+.+
T Consensus 343 ~~p~~~---~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~----------G~~v~~~----~~sp~~~l~l 405 (489)
T PLN02483 343 MSPPAV---QQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM----------GFEVLGD----NDSPVMPIML 405 (489)
T ss_pred cCHHHH---HHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC----------CCcccCC----CCCCEEEEEE
Confidence 121121 3445677766422 1 2334667888899999999885 3455554 2346666665
Q ss_pred ecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 481 FDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 481 ~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
... .....+.+.|.++||.+....++.. ..+.+.+|++++..+|.|||+++++
T Consensus 406 ~~~----~~~~~~~~~Ll~~GI~v~~~~fp~~-----------------------p~~~~~vRi~isa~~t~edId~~l~ 458 (489)
T PLN02483 406 YNP----AKIPAFSRECLKQNVAVVVVGFPAT-----------------------PLLLARARICISASHSREDLIKALE 458 (489)
T ss_pred CCH----HHHHHHHHHHHHCCcEEeeeCCCCC-----------------------CCCCceEEEEeCCCCCHHHHHHHHH
Confidence 431 1233455556678999874322210 0122389999999999999999999
Q ss_pred HHHHhhhhhhc
Q 037063 561 FVSRFLDADFV 571 (588)
Q Consensus 561 ~l~~~l~~~~~ 571 (588)
.|+++++...+
T Consensus 459 ~L~~~~~~~~~ 469 (489)
T PLN02483 459 VISEVGDLVGI 469 (489)
T ss_pred HHHHHHHHhCc
Confidence 99998765533
No 77
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.88 E-value=4e-20 Score=197.61 Aligned_cols=304 Identities=12% Similarity=0.060 Sum_probs=198.9
Q ss_pred hHHHHHHHHHHHHHhCCCCC-CceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISED-DYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~-e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++.+.+++.+++++|++.+ +++|++|+|+++++.+++.++ +++||+|++....+... ...++..|++++.++.
T Consensus 68 ~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~~P~y~~~----~~~~~~~g~~~~~v~~ 142 (389)
T PRK05957 68 PPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAI-TDPGDEIILNTPYYFNH----EMAITMAGCQPILVPT 142 (389)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCCcCH----HHHHHhcCCEEEEeec
Confidence 57788999999999997533 345999999999999999988 89999977654333212 2234668999999998
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCc--C--CCC-C
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATAL--G--SKD-M 327 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~--~--~~d-~ 327 (588)
+ .++.++.++|++.++ +++++|++++++|+||..+| +++| ++|+++|+++++|.+.. . +.. .
T Consensus 143 ~-~~~~~d~~~l~~~i~--------~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~ 213 (389)
T PRK05957 143 D-DNYQLQPEAIEQAIT--------PKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHF 213 (389)
T ss_pred C-CCCCcCHHHHHHhcC--------cCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCcc
Confidence 7 667899999999987 68999999999999999999 6667 88999999999999832 1 110 1
Q ss_pred CCCCC-CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 328 DTLGL-SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 328 ~~l~l-~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
....+ +...-.+++.|+.|.+|.+...+|++++++++++.+....... ..+++.
T Consensus 214 ~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~ 268 (389)
T PRK05957 214 SPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTI-------------------------LICPPV 268 (389)
T ss_pred ChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHHHHHHHhhc-------------------------ccCCCc
Confidence 11111 1122347888999999843334999999888877665432110 011122
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCe-EEEeCCCCCCCccc-EEEEEeecCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPL-VRIYGPKVMFDRGP-SLAFNVFDWN 484 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~-v~i~~p~~~~~rg~-iv~f~~~~~~ 484 (588)
+.+. ++..+|+.-... +++..+++++.++.+.+.|+++ ++ +.++.| .++ .+-+.+..
T Consensus 269 ~~q~----~~~~~l~~~~~~-~~~~~~~~~~~r~~l~~~L~~~---------~~~~~~~~~-----~gg~~~~~~~~~-- 327 (389)
T PRK05957 269 VSQY----AALGALQVGKSY-CQQHLPEIAQVRQILLKSLGQL---------QDRCTLHPA-----NGAFYCFLKVNT-- 327 (389)
T ss_pred HHHH----HHHHHHhCChHH-HHHHHHHHHHHHHHHHHHHHhc---------CCCccccCC-----CeeEEEEEeCCC--
Confidence 2221 112233210000 3445555667777788888764 22 233322 333 33344432
Q ss_pred CCCcCHHHHH-HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 485 GTRIDPALVQ-KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 485 g~~i~~~~v~-~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
+ ++..++. ++++++||.+.+|..+.. .+.++||+|++.. +.+++.+.++.|.
T Consensus 328 ~--~~~~~~~~~l~~~~gv~v~pg~~f~~------------------------~~~~~iRis~~~~-~~~~l~~~~~~l~ 380 (389)
T PRK05957 328 D--LNDFELVKQLIREYRVAVIPGTTFGM------------------------KNGCYLRIAYGAL-QKATAKEGIERLV 380 (389)
T ss_pred C--CChHHHHHHHHHHCCEEEccchhhCC------------------------CCCCEEEEEEecC-CHHHHHHHHHHHH
Confidence 1 4455554 555679999999854420 1123899999865 5677777777777
Q ss_pred Hhhhh
Q 037063 564 RFLDA 568 (588)
Q Consensus 564 ~~l~~ 568 (588)
++++.
T Consensus 381 ~~~~~ 385 (389)
T PRK05957 381 QGLKT 385 (389)
T ss_pred HHHHh
Confidence 76654
No 78
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=1.4e-20 Score=198.73 Aligned_cols=326 Identities=14% Similarity=0.122 Sum_probs=222.6
Q ss_pred CCeeeecCCCCC-CCCHHHHHHhhhhcccC-cCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHH
Q 037063 110 NNYVCFDYIGHG-LFSYSQMHSCSSNVHSS-AASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKR 187 (588)
Q Consensus 110 ~~~vyLD~a~~g-l~~~~~~~~~~~~~~~~-~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ 187 (588)
.+.++||.+... +.|+.+++++.+.+... ... |+.. . ..++|+.
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------Y~~~-~--~~~lr~~ 71 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEVALNR-------------------------------YPDP-R--AAALKAA 71 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhcccccc-------------------------------CCCC-C--HHHHHHH
Confidence 467889877666 45777888876544210 100 1110 1 2589999
Q ss_pred HHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHH
Q 037063 188 IMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGK 267 (588)
Q Consensus 188 ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~ 267 (588)
|++++|.+++ ..|++|+|+++++.+++..+ .++||+|++....+. .....++..|++++.++++ +++.+|+++
T Consensus 72 ia~~~~~~~~-~~I~~t~G~~~~i~~~~~~~-~~~gd~vlv~~P~y~----~~~~~~~~~g~~~~~i~~~-~~~~~d~~~ 144 (356)
T PRK04870 72 LRAAMGVPAG-ADVLLGNGSDELIQLLALAC-AKPGATVLAPEPGFV----MYRMSAKLAGLEFVGVPLT-ADFTLDLPA 144 (356)
T ss_pred HHHHhCcCCC-CcEEEcCCHHHHHHHHHHHh-cCCCCEEEECCCCHH----HHHHHHHHcCCEEEEecCC-CCCCCCHHH
Confidence 9999998754 25999999999999999988 799999876654432 2245678899999999997 667899999
Q ss_pred HHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCc--CCCCCCCCCCCCCCCcEEEecc
Q 037063 268 LMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATAL--GSKDMDTLGLSLFKPDFLICSF 344 (588)
Q Consensus 268 l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~--~~~d~~~l~l~~~~~D~vv~S~ 344 (588)
|++.+.. .++++|++++++||||..+|.+++ ++++..+.++|+|++.. ......+ .+....--+++.|+
T Consensus 145 l~~~~~~-------~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~vi~~~S~ 216 (356)
T PRK04870 145 MLAAIAE-------HRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLP-RLARFPNLLVMRTV 216 (356)
T ss_pred HHHHhhc-------CCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHH-HHhhCCCEEEEecc
Confidence 9999862 478999999999999999999999 77776688999999842 2111111 11222235788999
Q ss_pred CccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHH
Q 037063 345 YKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHAD 424 (588)
Q Consensus 345 ~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~ 424 (588)
+| +|.+..++|+++.++++++.+......+ . ...+.+ .+...+++...
T Consensus 217 SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~~--~-------------------------~~~~~q----~~a~~~l~~~~ 264 (356)
T PRK04870 217 SK-LGLAGLRLGYLAGHPAWIAELDKVRPPY--N-------------------------VNVLTQ----ATALFALEHVD 264 (356)
T ss_pred hh-hhhHHHhhhhhhCCHHHHHHHHHccCCC--c-------------------------CCHHHH----HHHHHHHhCHH
Confidence 99 7743334999999888877665433110 0 000111 12233443322
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEe
Q 037063 425 ALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISL 504 (588)
Q Consensus 425 ~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v 504 (588)
. +++..+++++.++++.+.|..+ +++++. | ..+..+.+.+. +...+.+.|.++||.|
T Consensus 265 ~--~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~-~----~~~~~~~~~~~-------~~~~~~~~l~~~gI~v 321 (356)
T PRK04870 265 V--LDAQAAQLRAERTRLAAALAAL---------PGVTVF-P----SAANFILVRVP-------DAAAVFDGLKTRGVLV 321 (356)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHhC---------CCcEEC-C----CCCeEEEEECC-------CHHHHHHHHHHCCEEE
Confidence 2 4667777788888888888874 455553 2 23556666554 2566778889999999
Q ss_pred ccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 505 SCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 505 ~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
+.|.... . .+.++||+|++ +.+|+++|+++|+++|
T Consensus 322 ~~~~~f~----------------~--------~~~~~iRis~~---~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 322 KNLSGMH----------------P--------LLANCLRVTVG---TPEENAQFLAALKAAL 356 (356)
T ss_pred EECCCCC----------------C--------CCCCeEEEeCC---CHHHHHHHHHHHHHhC
Confidence 8763210 0 11238999988 7899999999998764
No 79
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.88 E-value=8.3e-21 Score=201.26 Aligned_cols=287 Identities=14% Similarity=0.125 Sum_probs=202.0
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNL 261 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~ 261 (588)
.++|+.|++++|+++++ |++|+|+++++.+++.++ +++||+|++....+. .+ ...++..|++++.++. .++
T Consensus 70 ~~lr~~ia~~~~~~~~~--i~~t~G~~~~l~~~~~~l-~~~gd~vl~~~p~y~-~~---~~~~~~~g~~~~~~~~--~~~ 140 (367)
T PRK02731 70 FELKAALAEKFGVDPER--IILGNGSDEILELLARAY-LGPGDEVIYSEHGFA-VY---PIAAQAVGAKPVEVPA--KDY 140 (367)
T ss_pred HHHHHHHHHHhCcCHHH--EEEcCCHHHHHHHHHHHh-cCCCCEEEEecCCHH-HH---HHHHHHcCCeEEEecc--cCC
Confidence 48999999999997655 999999999999999998 889999776543332 23 2345678999999987 356
Q ss_pred ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc--CcEEEEeCCCcCCC--C--CCCCCC-C
Q 037063 262 RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK--GWHVLLDATALGSK--D--MDTLGL-S 333 (588)
Q Consensus 262 ~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~--g~~vvvDaa~~~~~--d--~~~l~l-~ 333 (588)
.+++++++++++ +++++|++++++|+||..+|+++| ++++.. |+++++|++..... + ...+.. .
T Consensus 141 ~~~~~~l~~~~~--------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~ 212 (367)
T PRK02731 141 GHDLDAMLAAVT--------PRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVA 212 (367)
T ss_pred CCCHHHHHHHhC--------CCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHh
Confidence 789999999887 678999999999999999999999 888764 89999999843210 0 111111 1
Q ss_pred CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhH
Q 037063 334 LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSK 413 (588)
Q Consensus 334 ~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~ 413 (588)
...-.+++.|+.|.||.++.++|++++++++++.+...... + . .+. +
T Consensus 213 ~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~~~------------------------~-~---~~~--~--- 259 (367)
T PRK02731 213 KFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVRQP------------------------F-N---VNS--L--- 259 (367)
T ss_pred hcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHccCC------------------------C-C---CCH--H---
Confidence 11234677799999885345679999998887766533210 0 0 010 1
Q ss_pred HHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHH
Q 037063 414 LVECKGLDHADAL-GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 414 ~al~~aL~~l~~~-G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~ 492 (588)
+...+++.++.. .++++.++.+.+.+++.+.|+++ ++.++ | ..++++.+.+.+. .+...
T Consensus 260 -~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~-~----~~g~~~~i~~~~~----~~~~~ 319 (367)
T PRK02731 260 -ALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL----------GLEYI-P----SVGNFILVDFDDG----KDAAE 319 (367)
T ss_pred -HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC----------CCccC-C----CCceEEEEECCCC----CCHHH
Confidence 111223333221 15677778888888898888874 23333 2 2467777776321 45677
Q ss_pred HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCC-ccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 493 VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSG-VSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 493 v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g-~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+.+.|.++||.++.|.. .+ .++||+|++ +.+|+++++++|++++++
T Consensus 320 ~~~~L~~~gI~v~~~~~---------------------------~~~~~~iRis~~---~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 320 AYQALLKRGVIVRPVAG---------------------------YGLPNALRITIG---TEEENRRFLAALKEFLAA 366 (367)
T ss_pred HHHHHHHCCEEEEeCCC---------------------------CCCCCeEEEecC---CHHHHHHHHHHHHHHHhc
Confidence 77778889999987632 11 128999987 789999999999998764
No 80
>PRK07908 hypothetical protein; Provisional
Probab=99.88 E-value=2.2e-20 Score=196.75 Aligned_cols=282 Identities=13% Similarity=0.096 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
..++|+.|++++++++++ |++|+|+++++.+++. +++++.++....+. . ....++..|++++.++.+ ++
T Consensus 60 ~~~lr~aia~~~~~~~~~--I~it~Ga~~al~~~~~---l~~~~viv~~P~y~---~--~~~~~~~~G~~i~~v~~~-~~ 128 (349)
T PRK07908 60 ERRARAAVAARHGRTPDE--VLLLAGAAEGFALLAR---LRPRRAAVVHPSFT---E--PEAALRAAGIPVHRVVLD-PP 128 (349)
T ss_pred hHHHHHHHHHHhCcChhh--EEECCCHHHHHHHHHh---cCCCeEEEeCCCCh---H--HHHHHHHcCCEEEeeccC-cc
Confidence 358999999999998765 9999999999999988 45655454432221 2 235667789999999987 44
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCc--CCCCCCCC-CCCCCC
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATAL--GSKDMDTL-GLSLFK 336 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~--~~~d~~~l-~l~~~~ 336 (588)
+.++.+++ . ++++++++++++||||..+|.++| ++|+ ++.++|+|++.. .+-...++ .+ ...
T Consensus 129 ~~~d~~~l----~--------~~~~~i~l~np~NPTG~~~~~~~l~~l~~-~~~~iIvDe~y~~~~~~~~~~l~~~-~~~ 194 (349)
T PRK07908 129 FRLDPAAV----P--------DDADLVVIGNPTNPTSVLHPAEQLLALRR-PGRILVVDEAFADAVPGEPESLAGD-DLP 194 (349)
T ss_pred cCcChhHh----c--------cCCCEEEEcCCCCCCCCCcCHHHHHHHHh-cCCEEEEECcchhhccCCccccccc-cCC
Confidence 66777643 4 568899999999999999999999 8886 578899999853 22111111 11 111
Q ss_pred CcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHH
Q 037063 337 PDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVE 416 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al 416 (588)
..+++.|++|.+|.+..++|++++++++++.+.+....+ ..++. .. +++
T Consensus 195 ~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~-------------------------~~~~~---~~---~a~ 243 (349)
T PRK07908 195 GVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHW-------------------------PVGTL---QL---EAI 243 (349)
T ss_pred CEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCCC-------------------------CccHH---HH---HHH
Confidence 235666999999843455799999988887765433210 01111 11 122
Q ss_pred HHHHH--HHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHH
Q 037063 417 CKGLD--HADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQ 494 (588)
Q Consensus 417 ~~aL~--~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~ 494 (588)
...++ .... ++++.++.+..++++.+.|.++ +++++.| ..+..+.+.+.+ .+.+.
T Consensus 244 ~~~~~~~~~~~--~~~~~~~~~~~r~~l~~~L~~~----------~~~~~~p----~~g~~~~~~~~~-------~~~~~ 300 (349)
T PRK07908 244 AACCAPRAVAE--AAADAARLAADRAEMVAGLRAV----------GARVVDP----AAAPFVLVRVPD-------AELLR 300 (349)
T ss_pred HHHhcccchHH--HHHHHHHHHHHHHHHHHHHHhC----------CcEeccC----CCceEEEEECCc-------HHHHH
Confidence 22221 1111 4667788888888999998873 3566654 235666666543 46788
Q ss_pred HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 495 KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 495 ~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+.|.++||.++.|..... .+..+||+|++ +.+|+++|+++|++++.+
T Consensus 301 ~~l~~~gI~v~~g~~f~~------------------------~~~~~vRis~~---~~~~~~~l~~al~~~~~~ 347 (349)
T PRK07908 301 KRLRERGIAVRRGDTFPG------------------------LDPDYLRLAVR---PRAEVPVLVQALAEILKA 347 (349)
T ss_pred HHHHhCCEEEEECCCCCC------------------------CCCCeEEEEeC---CCccHHHHHHHHHHHHhc
Confidence 888999999998743210 12239999986 789999999999998754
No 81
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.88 E-value=4.9e-20 Score=200.12 Aligned_cols=357 Identities=15% Similarity=0.109 Sum_probs=229.7
Q ss_pred CCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCc--hhHHHHHHHHHHHHHhCCC
Q 037063 118 IGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSE--ESELESKIRKRIMDFMNIS 195 (588)
Q Consensus 118 a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~--~~~~~~~~r~~ia~~lga~ 195 (588)
++-...|+.+++++...+... |+ .+.+.++. |++. -.++++-++++.+++|++.
T Consensus 41 asen~~s~~v~~a~~s~~~~k-y~----------------------~G~~g~r~-~~G~~~~d~lE~~~~~~~~~~f~~~ 96 (475)
T PLN03226 41 ASENFTSRAVMEALGSCLTNK-YS----------------------EGLPGARY-YGGNEYIDQIETLCQKRALEAFRLD 96 (475)
T ss_pred cCCccCCHHHHHHHhhHHhcc-cc----------------------CCCCCCcC-cCCChhHHHHHHHHHHHHHHHhCCC
Confidence 777889999999986555221 11 11122222 2222 2566667788899999997
Q ss_pred CCCceEEE---ecCHHHHHHHHHHhCCCCCCCeEEE-cC---CCchhHHHHHHHHHHhcCC--EEEE--EeccCCCCccC
Q 037063 196 EDDYTLVF---TANQSSAFKLLAESYPFYSNPRLLT-VY---DHENEAAALMIESSKKRGA--RVSS--AEFAWPNLRIH 264 (588)
Q Consensus 196 ~~e~~vvf---t~g~T~al~lv~~s~~~~~gd~ll~-~~---e~~s~~~~~~~~~a~~~G~--~v~~--v~~~~~~~~i~ 264 (588)
++. +.+ ..+++.|+..++.++ +++||+|+. +. .|.+ +.++..-.+..+. .+.. ..++..++.+|
T Consensus 97 ~~~--~~~nv~~~SG~~AN~av~~aL-~~pgD~Il~~d~~~gGhl~--H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD 171 (475)
T PLN03226 97 PEK--WGVNVQPLSGSPANFAVYTAL-LQPHDRIMGLDLPHGGHLS--HGYQTDGKKISATSIYFESMPYRLDESTGLID 171 (475)
T ss_pred cce--eEEecCcCchHHHHHHHHHHh-CCCCCEEEECCCCcCcchh--hhhhhcccccccceEEEEeeeeeecCCCCCcC
Confidence 654 434 367788888899999 899999875 32 2221 2221111111122 2222 23344678899
Q ss_pred HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC---CCCCCCCCCCCCcEE
Q 037063 265 SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK---DMDTLGLSLFKPDFL 340 (588)
Q Consensus 265 ~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~---d~~~l~l~~~~~D~v 340 (588)
.++|++++.+ .++++|++. .+ .+|...|+++| ++|+++|++++||++|.++. +..+..+ ..+|++
T Consensus 172 ~d~Le~~l~~-------~~pklIv~~-~S-~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~--~~~Div 240 (475)
T PLN03226 172 YDKLEKKAML-------FRPKLIIAG-AS-AYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPF--EYCDVV 240 (475)
T ss_pred HHHHHHHHhh-------cCCeEEEEe-cC-cCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCC--CCCeEE
Confidence 9999999872 356776663 33 48999999999 99999999999999988872 1111111 249999
Q ss_pred EeccCccC-CCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHH
Q 037063 341 ICSFYKIF-GENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKG 419 (588)
Q Consensus 341 v~S~~K~~-G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~a 419 (588)
++++||+| | |.| |+++++++.++.+.+.. + +...... .......+.| .|++++..+ +++..|
T Consensus 241 ~~t~hK~L~G--P~G-g~I~~~~~~~~~~~~g~-~--~~~d~~~------~i~~a~~~~~--~g~p~~~~i---aal~aA 303 (475)
T PLN03226 241 TTTTHKSLRG--PRG-GMIFFRKGPKPPKGQGE-G--AVYDYED------KINFAVFPGL--QGGPHNHTI---AALAVA 303 (475)
T ss_pred EecCcccccC--CCc-eEEEEchhhcccccCCC-c--cHHHHHH------HhccccCCcc--CCCchHHHH---HHHHHH
Confidence 99999977 6 888 88888887654433221 1 1101000 0000000123 455776665 888999
Q ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHh
Q 037063 420 LDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADR 499 (588)
Q Consensus 420 L~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~ 499 (588)
|+++.+.|.+.+.+++..++++|.+.|.++ +++++++.. ...++.+.+... | ++...+.+.|++
T Consensus 304 l~~i~~~~~~~~~~~~~~na~~L~~~L~~~----------G~~l~~~~t---~~hi~lv~~~~~-g--i~~~~~~~~L~~ 367 (475)
T PLN03226 304 LKQAMTPEFKAYQKQVKANAAALANRLMSK----------GYKLVTGGT---DNHLVLWDLRPL-G--LTGSRVEKVLDL 367 (475)
T ss_pred HHHHhCcCHHHHHHHHHHHHHHHHHHHHhC----------CCEEEcCCC---CCCEEEEEccCC-C--CCHHHHHHHHHH
Confidence 999998899999999999999999999874 577776532 235555554321 1 678889999999
Q ss_pred CCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEe----cCCCCCHHHHHHHHHHHHHhhhh
Q 037063 500 HNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAA----LGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 500 ~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvS----lg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.||.+-.+.. |+... ....+.||+. ...-.+++|++++.++|.+.|+.
T Consensus 368 ~~I~~nk~~~--p~~~~-------------------~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 368 AHITLNKNAV--PGDSS-------------------ALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred CCCEECCCCC--CCCcc-------------------cCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 9999865531 11000 0111256662 23445889999999999999984
No 82
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.88 E-value=5e-20 Score=196.29 Aligned_cols=334 Identities=13% Similarity=0.089 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
...+++|+.+++++|++ + .++++|+|+|+.+++.++.+++||+|++ ...|++ . ...++..|+++++++++
T Consensus 29 ~~~~~le~~la~~~g~~---~-~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~-~----~~~~~~~G~~~~~~~~~ 99 (380)
T TIGR03588 29 PTVPAFEEALAEYVGAK---Y-AVAFNSATSALHIACLALGVGPGDRVWTTPITFVA-T----ANCALYCGAKVDFVDID 99 (380)
T ss_pred hhHHHHHHHHHHHHCCC---e-EEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHH-H----HHHHHHcCCEEEEEecC
Confidence 34578999999999994 3 4556689999999999988899999765 445543 2 34456789999999997
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC--CCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK--DMDTLGLSL 334 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~--d~~~l~l~~ 334 (588)
..++.+|++++++.|++ ...+++++|++.+ ++|...|+++| ++|+++|++||+|++|+.+. +..+++...
T Consensus 100 ~~~~~~d~~~l~~~i~~----~~~~~t~~v~~~~---~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~ 172 (380)
T TIGR03588 100 PDTGNIDEDALEKKLAA----AKGKLPKAIVPVD---FAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCR 172 (380)
T ss_pred CCcCCcCHHHHHHHhhc----ccCCCceEEEEeC---CCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCcc
Confidence 55678999999999972 1124688888655 58999999999 99999999999999998872 223333100
Q ss_pred CCCcEEEeccC--ccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC----Cc
Q 037063 335 FKPDFLICSFY--KIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES----SI 407 (588)
Q Consensus 335 ~~~D~vv~S~~--K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~----~~ 407 (588)
..|+.++|+| |+++. +. .|+++.+ +++.++++....++ ....... .......+ ..| +.++. .+
T Consensus 173 -~~d~~~~S~~~~K~~~~-~~-GG~v~~~~~~~~~~~~~~~~~g-~~~~~~~----~~~~~~~~-~~~-~~~~~g~n~~m 242 (380)
T TIGR03588 173 -YADATVFSFHPVKIITT-AE-GGAVTTNDEELAERMRLLRSHG-ITKDPLL----FEKQDEGP-WYY-EQQELGFNYRM 242 (380)
T ss_pred -ccceEEEecCCCCcccc-cC-ceEEEECCHHHHHHHHHHHHCC-CCCCccc----ccccccCc-cee-eeeccccccCc
Confidence 1399999999 88874 44 3555554 44555555432221 0000000 00000000 022 22221 11
Q ss_pred cchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc-cEEEEEeecCCCC
Q 037063 408 SGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG-PSLAFNVFDWNGT 486 (588)
Q Consensus 408 ~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg-~iv~f~~~~~~g~ 486 (588)
..+ . ...++..++. ++.+.++.+++++++.+.|.++ +.++++.+....... ....+.+....|
T Consensus 243 ~~l---~-aa~g~~qL~~--l~~~~~~r~~~~~~~~~~L~~~---------~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 306 (380)
T TIGR03588 243 TDI---Q-AALGLSQLKK--LDRFVAKRREIAARYDRLLKDL---------PYFTPLTIPLGSKSAWHLYPILLDQEFG- 306 (380)
T ss_pred cHH---H-HHHHHHHHHH--HHHHHHHHHHHHHHHHHHhcCC---------CCccCCCCCCCCEeEEEEEEEEECCcCC-
Confidence 221 1 1234445555 5888999999999999999875 555554432111111 122222322122
Q ss_pred CcCHHHHHHHHHhCCcEeccccccCcc---cccchH---HHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 487 RIDPALVQKLADRHNISLSCGFLQNIF---FSGEYE---QERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 487 ~i~~~~v~~~l~~~gI~v~~G~~c~~~---~~~~~~---~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
++.+.+.+.|.++||.++..+.+... +...+. -.....+. ...|++.+|...|.+||+++++
T Consensus 307 -~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~-----------~~~l~lP~~~~l~~~dv~~i~~ 374 (380)
T TIGR03588 307 -CTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFY-----------LAEISLPLHPALTLEQQQRVVE 374 (380)
T ss_pred -CCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHH-----------hceEEcCCCCCCCHHHHHHHHH
Confidence 56788999999999998866433110 000000 00011111 1289999999999999999999
Q ss_pred HHHHhh
Q 037063 561 FVSRFL 566 (588)
Q Consensus 561 ~l~~~l 566 (588)
.|+++|
T Consensus 375 ~l~~~~ 380 (380)
T TIGR03588 375 TLRKVL 380 (380)
T ss_pred HHHHhC
Confidence 999875
No 83
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.88 E-value=4.6e-20 Score=197.34 Aligned_cols=300 Identities=10% Similarity=0.052 Sum_probs=202.1
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcC-CCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVY-DHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~-e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++.+++++.+++++|++ + .|++|+| ++++..++.++ +++||+|++.. .|++ .. ..++..|+++..++.
T Consensus 86 ~~l~~~l~~~la~~~g~~-~--~i~~tsG-~~a~~~~~~~l-~~~gd~vi~~~~~~~~-~~----~~~~~~~~~~~~~~~ 155 (397)
T PRK06939 86 QDLHKELEEKLAKFLGTE-D--AILYSSC-FDANGGLFETL-LGKEDAIISDALNHAS-II----DGVRLCKAKRYRYAN 155 (397)
T ss_pred cHHHHHHHHHHHHHhCCC-c--EEEEcCh-HHHHHHHHHHh-CCCCCEEEEEhhhhHH-HH----HHHHhcCCceEEeCC
Confidence 467789999999999974 3 4888887 77888888888 89999976544 4443 22 234556888776653
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC---C----CC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK---D----MD 328 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~---d----~~ 328 (588)
.|.+++++.+++. .....++++|+..++.|++|...++++| ++|+++|+++|+|+++..+. + ..
T Consensus 156 ------~d~~~l~~~i~~~--~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~ 227 (397)
T PRK06939 156 ------NDMADLEAQLKEA--KEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVE 227 (397)
T ss_pred ------CCHHHHHHHHHhh--hccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHH
Confidence 4788888888620 0011378899999999999999999999 99999999999999985431 1 01
Q ss_pred CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc
Q 037063 329 TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS 408 (588)
Q Consensus 329 ~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~ 408 (588)
..++. ..+|++++|++|+++. + .+|++++++++++.+...... . . -.++.+..
T Consensus 228 ~~~~~-~~~~i~~~S~sK~~~g-~-r~G~v~~~~~~~~~l~~~~~~--~--------------------~--~~~~~~~~ 280 (397)
T PRK06939 228 HFGVM-DRVDIITGTLGKALGG-A-SGGYTAGRKEVIDWLRQRSRP--Y--------------------L--FSNSLAPA 280 (397)
T ss_pred HcCCC-CCCcEEEEECHHHhCc-c-CceEEEeCHHHHHHHHHhCcc--c--------------------c--ccCCCCHH
Confidence 11221 2479999999998852 5 469999998887766532110 0 0 01121111
Q ss_pred chhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCc
Q 037063 409 GVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i 488 (588)
. .+++.++++++.. .+.+.++.+++++++++.|.++ | +++..+ .++++.+.+.+. .
T Consensus 281 ~---~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-------~---~~~~~~-----~~~~~~~~~~~~----~ 336 (397)
T PRK06939 281 I---VAASIKVLELLEE--SDELRDRLWENARYFREGMTAA-------G---FTLGPG-----EHPIIPVMLGDA----K 336 (397)
T ss_pred H---HHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-------C---CCcCCC-----CCCEEEEEECCH----H
Confidence 1 1444566777654 2677888899999999999875 2 222222 345555444321 2
Q ss_pred CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 489 DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 489 ~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+...+.+.|.++||.+..+.+... ..+...||++++++++.+||+++++.|++++++
T Consensus 337 ~~~~~~~~L~~~gI~v~~~~~~~~-----------------------~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 337 LAQEFADRLLEEGVYVIGFSFPVV-----------------------PKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred HHHHHHHHHHHCCceEeeeCCCCC-----------------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 345566666666999875432100 012238999999999999999999999998766
Q ss_pred h
Q 037063 569 D 569 (588)
Q Consensus 569 ~ 569 (588)
.
T Consensus 394 ~ 394 (397)
T PRK06939 394 L 394 (397)
T ss_pred h
Confidence 4
No 84
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=6.7e-21 Score=201.03 Aligned_cols=282 Identities=10% Similarity=0.058 Sum_probs=191.1
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCC-CeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSN-PRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~g-d~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
.++|+.+++++|+++++ |++|+|+++++.+++.++ .++| |+|++....+. . + ...++..|++++.+|.+ .+
T Consensus 63 ~~Lr~aia~~~~~~~~~--I~it~Gs~~~i~~~~~~~-~~~g~d~vlv~~P~y~-~--y-~~~~~~~g~~v~~v~~~-~~ 134 (354)
T PRK04635 63 PELINAYSAYAGVAPEQ--ILTSRGADEAIELLIRAF-CEPGQDSIACFGPTYG-M--Y-AISAETFNVGVKALPLT-AD 134 (354)
T ss_pred HHHHHHHHHHhCcCHHH--EEEeCCHHHHHHHHHHHh-cCCCCCeEEEcCCChH-H--H-HHHHHHcCCEEEEEecC-CC
Confidence 58999999999998876 999999999999999999 7888 78776554432 1 2 34567889999999997 55
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH-cCcEEEEeCCCcCC-CCCCCCCC-CCCC
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE-KGWHVLLDATALGS-KDMDTLGL-SLFK 336 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~-~g~~vvvDaa~~~~-~d~~~l~l-~~~~ 336 (588)
+.++.+.++ .+ +++++|++++++||||..+|.+++ ++++. .+++||+|++..-- .+....++ ...+
T Consensus 135 ~~~~~~~l~-~~---------~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~ 204 (354)
T PRK04635 135 YQLPLDYIE-QL---------DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYP 204 (354)
T ss_pred CCCCHHHHH-hc---------cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCC
Confidence 678888776 22 478999999999999999999999 88776 37999999984221 00010111 1111
Q ss_pred CcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHH
Q 037063 337 PDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVE 416 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al 416 (588)
-=+++.|++|+||.++.++|++++++++++.+....... + .+ . ...
T Consensus 205 ~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~~~-~---------------------------~~--~----~~~ 250 (354)
T PRK04635 205 NLVVLRTLSKAFALAGARCGFTLANEELIEILMRVIAPY-P---------------------------VP--L----PVS 250 (354)
T ss_pred CEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhcCCC-C---------------------------CC--H----HHH
Confidence 235788999999854455899999998887665332110 0 00 0 011
Q ss_pred HHHHHHHHHhCHHHHH---HHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHH
Q 037063 417 CKGLDHADALGLILIS---NRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALV 493 (588)
Q Consensus 417 ~~aL~~l~~~G~~~i~---~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v 493 (588)
..++..+...|.+.+. ++++..++++.+.|.++ ++++++.+ .+..+.+.+. +...+
T Consensus 251 ~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---------~~~~~~~~-----~g~f~~~~~~-------~~~~~ 309 (354)
T PRK04635 251 EIATQALSEAGLARMKFQVLDLNAQGARLQAALSMY---------GGAKVLEG-----NGNYVLAKFD-------DVDAV 309 (354)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC---------CCceECCC-----CCcEEEEECC-------CHHHH
Confidence 2334444433444443 34455567888888874 34666543 2444444433 25667
Q ss_pred HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 494 QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 494 ~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
.+++.++||.++.+. .. .+.++||+|++ +.||+++|+++|++.
T Consensus 310 ~~~l~~~gv~v~~~~--~~------------------------~~~~~lRis~~---~~e~~~~l~~al~~~ 352 (354)
T PRK04635 310 FKALWDAGIVARAYK--DP------------------------RLANCIRFSFS---NRAETDKLIGLIRNQ 352 (354)
T ss_pred HHHHHHCCEEEEECC--CC------------------------CCCCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 788889999997531 00 11128999976 899999999998764
No 85
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.88 E-value=9e-21 Score=198.40 Aligned_cols=294 Identities=17% Similarity=0.119 Sum_probs=200.5
Q ss_pred HHHHHHHHHhCCC----CCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccC
Q 037063 183 KIRKRIMDFMNIS----EDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAW 258 (588)
Q Consensus 183 ~~r~~ia~~lga~----~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~ 258 (588)
++++.++++++.. .....+++++|+|+++..++.++ .++|++|++....+.+. ...++..|.+++.++.+
T Consensus 40 ~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~-~~~g~~vl~~~~~~~~~----~~~~~~~~~~~~~i~~~- 113 (350)
T cd00609 40 ELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRAL-LNPGDEVLVPDPTYPGY----EAAARLAGAEVVPVPLD- 113 (350)
T ss_pred HHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHh-CCCCCEEEEcCCCchhH----HHHHHHCCCEEEEEecc-
Confidence 4555555555543 22345999999999999999999 78899976544433212 34567789999999997
Q ss_pred CCCccCH--HHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCcCCCC--CCC-
Q 037063 259 PNLRIHS--GKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATALGSKD--MDT- 329 (588)
Q Consensus 259 ~~~~i~~--e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~~~~d--~~~- 329 (588)
.++.++. +.++..+. +++++|++++++|+||...|++++ ++|+++|+++++|+++..... ...
T Consensus 114 ~~~~~~~~~~~~~~~~~--------~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~ 185 (350)
T cd00609 114 EEGGFLLDLELLEAAKT--------PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPP 185 (350)
T ss_pred cccCCccCHHHHHhhcC--------ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccc
Confidence 4444443 45554444 789999999999999999998775 589999999999999765310 010
Q ss_pred --CCCCCCCCcEEEeccCccCCCCCCceEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 330 --LGLSLFKPDFLICSFYKIFGENPSGFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 330 --l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
........|+++.|++|++|.++.++|++++++ ++.+.++..... ..++++
T Consensus 186 ~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~--------------------------~~~~~~ 239 (350)
T cd00609 186 ALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPY--------------------------TTSGPS 239 (350)
T ss_pred cccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHh--------------------------cccCCC
Confidence 223345589999999998874356799999998 666655432210 112233
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGT 486 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~ 486 (588)
.... .++..+|+... .+++++.+++..+++++.+.|.++ +...+..+ ..+.++.+.+.+.
T Consensus 240 ~~~~---~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~~----~~g~~~~~~~~~~--- 299 (350)
T cd00609 240 TLSQ---AAAAAALDDGE-EHLEELRERYRRRRDALLEALKEL---------GPLVVVKP----SGGFFLWLDLPEG--- 299 (350)
T ss_pred hHHH---HHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhc---------CCccccCC----CccEEEEEecCCC---
Confidence 3332 34455555443 247888999999999999999985 22222111 3455555665542
Q ss_pred CcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 487 RIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 487 ~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
.....+.+++.++||.++.+..+.. .+..+||++++.. .|||++++++|+
T Consensus 300 -~~~~~~~~~l~~~gi~i~~~~~~~~------------------------~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 300 -DDEEFLERLLLEAGVVVRPGSAFGE------------------------GGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred -ChHHHHHHHHHhCCEEEeccccccc------------------------CCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 2466788899999999987643310 1223999999987 999999999975
No 86
>PLN02721 threonine aldolase
Probab=99.88 E-value=1.6e-20 Score=197.78 Aligned_cols=300 Identities=13% Similarity=0.061 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC-CCCeEEEcCC-CchhHHHHHHHHHHhcCCEEEEEeccC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY-SNPRLLTVYD-HENEAAALMIESSKKRGARVSSAEFAW 258 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~-~gd~ll~~~e-~~s~~~~~~~~~a~~~G~~v~~v~~~~ 258 (588)
..++|+.|+++++.+ . +++++++|+++.+++.++ .. +||+|++... |.+ .+.. ...++..|++++.++.+
T Consensus 42 ~~~l~~~la~~~~~~--~--~~~~~~Gs~a~~~~l~~~-~~~~gd~Vl~~~~~~~~-~~~~-~~~~~~~g~~~~~v~~~- 113 (353)
T PLN02721 42 ALRLEEEMAKIFGKE--A--ALFVPSGTMGNLISVLVH-CDVRGSEVILGDNSHIH-LYEN-GGISTLGGVHPRTVKNN- 113 (353)
T ss_pred HHHHHHHHHHHhCCc--e--eEEecCccHHHHHHHHHH-ccCCCCeEEEcCcccee-hhcc-cchhhhcCceeEecCCC-
Confidence 578999999999984 2 567777787766777766 44 8999775543 432 2211 01456789999999987
Q ss_pred CCCccCHHHHHHHHhhhccccCCCcceEEEEeCC-CCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCCC-CCCCCCC
Q 037063 259 PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQ-SKVTGARYS---YMWM-SVAAEKGWHVLLDATALGSK-DMDTLGL 332 (588)
Q Consensus 259 ~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~-sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~~-d~~~l~l 332 (588)
+++.+|+++++++|++. .....+++++|+++++ +|++|..+| +++| ++|+++|+++++|+++.... .....+.
T Consensus 114 ~~~~~d~~~l~~~i~~~-~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~ 192 (353)
T PLN02721 114 EDGTMDLDAIEAAIRPK-GDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPV 192 (353)
T ss_pred cCCCcCHHHHHHHHHhc-cCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCH
Confidence 67789999999999721 0111147899999775 677999998 4577 88999999999999865431 0001111
Q ss_pred C--CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 333 S--LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 333 ~--~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
. ...+|+++.|+||+++. |.| |+++.++++++.+...... ..|+....+.
T Consensus 193 ~~~~~~~d~~~~s~sK~l~~-~~G-~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~ 244 (353)
T PLN02721 193 HRLVKAADSVSVCLSKGLGA-PVG-SVIVGSKSFIRKAKRLRKT--------------------------LGGGMRQVGV 244 (353)
T ss_pred HHHhhhCCEEEEecccccCC-cee-eEEecCHHHHHhHHHHHHh--------------------------cCCCeehhHH
Confidence 1 12489999999998884 544 4566677776654332110 0011111111
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEE-eCCCCCCCcccEEEEEeecCCCCCcC
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRI-YGPKVMFDRGPSLAFNVFDWNGTRID 489 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i-~~p~~~~~rg~iv~f~~~~~~g~~i~ 489 (588)
.+ ..++..++.. ++.+ ++...+++++.+.|.++ +++++ +.+ ..++++.+.+.... ..+
T Consensus 245 ---~~-~~~~~~l~~~-~~~~-~~~~~~~~~l~~~L~~~---------~~~~~~~~~----~~~~~~~~~~~~~~--~~~ 303 (353)
T PLN02721 245 ---LA-AAALVALQEN-VPKL-EDDHKKAKLLAEGLNQI---------KGLRVNVAA----VETNIVYFDITDGS--RIT 303 (353)
T ss_pred ---HH-HHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHhC---------CCcEEecCC----ccceEEEEEccCCc--ccc
Confidence 11 1222222221 2222 33356778899999874 44543 322 23567777765411 134
Q ss_pred HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 490 PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 490 ~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
...+.+.|.++||.++.+. . ..||++++++++.+|+++++++|+++++.
T Consensus 304 ~~~~~~~L~~~gi~v~~~~----------------------------~--~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 304 AEKLCKSLEEHGVLLMPGN----------------------------S--SRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred HHHHHHHHHhCCcEEecCC----------------------------C--ceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 5677777789999998651 1 18999999999999999999999987753
No 87
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=6.3e-21 Score=200.97 Aligned_cols=280 Identities=12% Similarity=0.093 Sum_probs=190.0
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCC-CeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSN-PRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~g-d~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
.++++.+++++|+++++ |++|+|+++++.+++.++ +++| ++|++....+. . ....++..|++++.++.+ ++
T Consensus 60 ~~l~~~~a~~~g~~~~~--I~~~~Gs~e~i~~~~~~~-~~~g~~~vli~~P~y~-~---y~~~~~~~G~~~~~v~~~-~~ 131 (351)
T PRK01688 60 KAVIENYAAYAGVKPEQ--VLVSRGADEGIELLIRAF-CEPGKDAILYCPPTYG-M---YSVSAETIGVEIRTVPTL-DN 131 (351)
T ss_pred HHHHHHHHHHhCCCHHH--EEEcCCHHHHHHHHHHHh-cCCCCCEEEEcCCCHH-H---HHHHHHHcCCEEEEeecC-CC
Confidence 58999999999998876 999999999999999998 8887 77776544332 1 245667789999999987 56
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH--cCcEEEEeCCC--cCCC-CCCCCCCCC
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE--KGWHVLLDATA--LGSK-DMDTLGLSL 334 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~--~g~~vvvDaa~--~~~~-d~~~l~l~~ 334 (588)
+.+|.+++++++. ++++|++++++||||..++.+++ ++++. .+++||+|.+. +.+. .+..+ +..
T Consensus 132 ~~~d~~~l~~~~~---------~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~-~~~ 201 (351)
T PRK01688 132 WQLDLPAIADNLD---------GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGW-LAE 201 (351)
T ss_pred CCCCHHHHHHhcc---------CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHH-Hhh
Confidence 7889999987663 68999999999999999999998 66543 26789999983 2221 01111 122
Q ss_pred CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHH
Q 037063 335 FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKL 414 (588)
Q Consensus 335 ~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~ 414 (588)
++--+++.||+|.||.++.++|+++.++++++.+......+ . .+ ..
T Consensus 202 ~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~--~--------------------------v~--~~---- 247 (351)
T PRK01688 202 YPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPY--P--------------------------LS--TP---- 247 (351)
T ss_pred CCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCCC--C--------------------------CC--HH----
Confidence 22347888999999954445799999988887665433110 0 00 00
Q ss_pred HHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHH
Q 037063 415 VECKGLDHADALG---LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPA 491 (588)
Q Consensus 415 al~~aL~~l~~~G---~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~ 491 (588)
+...|...+...+ +++..+++...++++.+.|.++ ++++.+.| ..+..+.+.+.+ .+
T Consensus 248 ~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---------~~~~~~~p----s~~nfi~~~~~~-------~~ 307 (351)
T PRK01688 248 VADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEI---------PCVEQVFD----SETNYILARFTA-------SS 307 (351)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhC---------CCCCeECC----CCCcEEEEEcCC-------HH
Confidence 1112222332212 2334455556678888888874 44432333 234555555432 56
Q ss_pred HHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCc-cEEEEecCCCCCHHHHHHHHHHH
Q 037063 492 LVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGV-SVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 492 ~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~-~~vRvSlg~~~t~eDv~~li~~l 562 (588)
.+.+.|.++||.++.+..+ .|. +++|||+| +.+|+++|+++|
T Consensus 308 ~l~~~L~~~gi~vr~~~~~--------------------------~~~~~~iRis~~---~~~e~~~l~~al 350 (351)
T PRK01688 308 AVFKSLWDQGIILRDQNKQ--------------------------PGLSNCLRITIG---TREECQRVIDAL 350 (351)
T ss_pred HHHHHHHHCCeEEEECCCc--------------------------CCCCCeEEEeCC---CHHHHHHHHHhh
Confidence 6777777899999865221 111 28999999 789999999986
No 88
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.88 E-value=2.5e-20 Score=198.67 Aligned_cols=166 Identities=13% Similarity=0.115 Sum_probs=131.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+++++++++++|++ + +++|+|+++|+.+++.++ +++||+|++ ...|.+ .+..+...++..|+++++++.
T Consensus 60 ~p~~~~le~~la~l~g~~--~--~v~~ssG~~Ai~~al~al-~~~Gd~Vi~~~~~y~~-t~~~~~~~~~~~G~~v~~vd~ 133 (390)
T PRK08133 60 NPTVTMFQERLAALEGAE--A--CVATASGMAAILAVVMAL-LQAGDHVVSSRSLFGS-TVSLFEKIFARFGIETTFVDL 133 (390)
T ss_pred ChHHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEccCcchh-HHHHHHHHHHHcCcEEEEECC
Confidence 455789999999999984 3 788999999999999988 899999765 445554 444445566788999999976
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ +.++++++|+ ++|++|++.+++|++|...|+++| ++|+++|+++++|++...+....++. .
T Consensus 134 ~------d~~~l~~~i~--------~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~pl~---~ 196 (390)
T PRK08133 134 T------DLDAWRAAVR--------PNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQPLK---L 196 (390)
T ss_pred C------CHHHHHHhcC--------cCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCCchh---h
Confidence 4 6788998887 789999999999999999999999 99999999999999976663222322 2
Q ss_pred CCcEEEeccCccCCCCCCc--e-EEEEEeCcchhcc
Q 037063 336 KPDFLICSFYKIFGENPSG--F-GCLFVKKSSASVL 368 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~-G~L~v~~~~~~~l 368 (588)
++|+++.|++|++| +.| + |+++.+++.++++
T Consensus 197 g~Divv~S~sK~~~--g~g~~~GG~vv~~~~~~~~~ 230 (390)
T PRK08133 197 GADVVIHSATKYLD--GQGRVLGGAVVGSKELMEEV 230 (390)
T ss_pred CCcEEEeecceeec--CCcceEeEEEEcCHHHHHHH
Confidence 38999999999888 444 4 5666666655444
No 89
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.88 E-value=2.3e-20 Score=199.39 Aligned_cols=342 Identities=12% Similarity=0.054 Sum_probs=225.6
Q ss_pred CCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCc--hhHHHHHHHHHHHHHhCCC
Q 037063 118 IGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSE--ESELESKIRKRIMDFMNIS 195 (588)
Q Consensus 118 a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~--~~~~~~~~r~~ia~~lga~ 195 (588)
++-..+|+.+++++...+.... + .+.+.. .+|++. -.+++.-+.++..++||++
T Consensus 56 asEN~~s~~v~~a~~s~l~nky-----a------------------eg~pg~-ryy~g~~~~d~ie~l~~~ra~~lf~a~ 111 (493)
T PRK13580 56 ASENYSSLAVQLAMGNLLTDKY-----A------------------EGTPGH-RFYAGCQNVDTVEWEAAEHAKELFGAE 111 (493)
T ss_pred cccccCCHHHHHHhcccccccC-----c------------------CCCCCc-cccCCCchHHHHHHHHHHHHHHHhCCC
Confidence 7778899999998755443221 1 111221 223333 2788888999999999996
Q ss_pred CCCceEEEecCHHHHHHHHHHhCCCCC-------------------------------CCeEEE-cC---CCchhHHHHH
Q 037063 196 EDDYTLVFTANQSSAFKLLAESYPFYS-------------------------------NPRLLT-VY---DHENEAAALM 240 (588)
Q Consensus 196 ~~e~~vvft~g~T~al~lv~~s~~~~~-------------------------------gd~ll~-~~---e~~s~~~~~~ 240 (588)
. .-|=--+++.|+..+..++ ++| ||+|+. +. +|-+ +.+.
T Consensus 112 ~---anvqp~Sg~~An~~v~~al-l~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlt--hg~~ 185 (493)
T PRK13580 112 H---AYVQPHSGADANLVAFWAI-LAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLT--HGFR 185 (493)
T ss_pred c---ccccCCCcHHHHHHHHHHH-hcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeee--cCcc
Confidence 3 3344456677777777777 655 688662 22 2211 1010
Q ss_pred HHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeC
Q 037063 241 IESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDA 319 (588)
Q Consensus 241 ~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDa 319 (588)
..+ .....+++..+++..++.+|.+++++.+. +++++|++++.||. |...|+++| ++|+++|++++||+
T Consensus 186 ~n~-~~~~~~~~~y~vd~~~g~iD~d~l~~~~~--------~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~ 255 (493)
T PRK13580 186 PNI-SGKMFHQRSYGVDPDTGLLDYDEIAALAR--------EFKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDM 255 (493)
T ss_pred cch-hhheeeeEecccCcccCccCHHHHHHHHh--------hcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEEC
Confidence 111 11234666667775678999999999998 78899999999999 558899999 99999999999999
Q ss_pred CCcCCC---CCCC--CCCCCCCCcEEEeccCccC-CCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccc
Q 037063 320 TALGSK---DMDT--LGLSLFKPDFLICSFYKIF-GENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELET 393 (588)
Q Consensus 320 a~~~~~---d~~~--l~l~~~~~D~vv~S~~K~~-G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~ 393 (588)
+|.+|. +... ++. ...+||+++|+||.| | |.| |++++++++++.+.... .
T Consensus 256 AH~~Gligg~~~~~~~~~-~~~~D~vtgT~hKaL~G--P~G-G~I~~~~~l~~~L~~a~-P------------------- 311 (493)
T PRK13580 256 AHFAGLVAGKVFTGDEDP-VPHADIVTTTTHKTLRG--PRG-GLVLAKKEYADAVDKGC-P------------------- 311 (493)
T ss_pred chhhceeccccchhhcCC-CCCCcEEEeCChhhccC--CCe-EEEEecHHHHHHHhhCC-C-------------------
Confidence 999872 1110 111 125899999999966 7 886 99999998877663111 0
Q ss_pred ccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc
Q 037063 394 LDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG 473 (588)
Q Consensus 394 ~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg 473 (588)
| -.|++..+.+ ++...++..+.+-+.....+++..++++|.+.|.++ | +.+.... ..+
T Consensus 312 -----~-i~gg~l~p~i---AA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-------G---~~vv~gg---Tds 369 (493)
T PRK13580 312 -----L-VLGGPLPHVM---AAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-------G---ARLVTGG---TDN 369 (493)
T ss_pred -----c-ccCCCccHHH---HHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-------C---CCccCCC---CCC
Confidence 0 1223333333 555566666654344668899999999999999985 3 3343221 246
Q ss_pred cEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCC---
Q 037063 474 PSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLT--- 550 (588)
Q Consensus 474 ~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~--- 550 (588)
+|+.+.+.+.+ +....+.+.|.+.||.+..- .-|..... ..-...||+++..++
T Consensus 370 hIV~V~lg~~~---~~g~~a~~~L~e~GI~vn~i--~~Ptvp~g------------------~~~~srLRIg~~A~ttrg 426 (493)
T PRK13580 370 HLVLIDVTSFG---LTGRQAESALLDAGIVTNRN--SIPSDPNG------------------AWYTSGIRLGTPALTTLG 426 (493)
T ss_pred CEEEEEeCCHH---HHHHHHHHHHHHCCeEEccc--cCCCCCCC------------------CCCCceEEeccchhhhcC
Confidence 89988886522 33446778899999987532 11110000 011238999998855
Q ss_pred -CHHHHHHHHHHHHHhhhh
Q 037063 551 -NFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 551 -t~eDv~~li~~l~~~l~~ 568 (588)
+++||++++++|.+.++.
T Consensus 427 ~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 427 MGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 599999999999998864
No 90
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.87 E-value=3.4e-20 Score=202.73 Aligned_cols=262 Identities=15% Similarity=0.087 Sum_probs=180.4
Q ss_pred hHHHHHHHHHHHHHhCCC-----------CCCceEEEecCHHHHHHHHHHh---CCCC----------------------
Q 037063 178 SELESKIRKRIMDFMNIS-----------EDDYTLVFTANQSSAFKLLAES---YPFY---------------------- 221 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~-----------~~e~~vvft~g~T~al~lv~~s---~~~~---------------------- 221 (588)
.+++.++-++++++++.. ++...-+||+|+|+|+-..+.. ..+.
T Consensus 128 t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~ 207 (522)
T TIGR03799 128 TPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGY 207 (522)
T ss_pred HHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccC
Confidence 688889999999998532 2233479999999986543222 1011
Q ss_pred CCCeEE-EcCCCchhHHHHHHHHHHhcCC---EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEe--CCCCC
Q 037063 222 SNPRLL-TVYDHENEAAALMIESSKKRGA---RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFP--LQSKV 295 (588)
Q Consensus 222 ~gd~ll-~~~e~~s~~~~~~~~~a~~~G~---~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~--~~sn~ 295 (588)
++..|+ +..+|+| + .+.++..|. +++.||++ +++++|+++|+++|.+. ...+++++++. +.++.
T Consensus 208 ~~~~v~~S~~~H~S--~---~kaa~~lglg~~~v~~vp~d-~~g~~d~~~L~~~i~~~----~~~g~~~~~vvataGtt~ 277 (522)
T TIGR03799 208 DGLAILVSERGHYS--L---GKAADVLGIGRDNLIAIKTD-ANNRIDVDALRDKCAEL----AEQNIKPLAIVGVAGTTE 277 (522)
T ss_pred CceEEEECCCchHH--H---HHHHHHcCCCcccEEEEEeC-CCCcCCHHHHHHHHHHH----HHCCCCcEEEEEEecCcC
Confidence 122344 4566765 2 355666777 89999998 78999999999999731 11345555555 55779
Q ss_pred CCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCC-C--CCCC-CCCcEEEeccCccCCCCCCceEEEEEeCcc-hhccc
Q 037063 296 TGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDT-L--GLSL-FKPDFLICSFYKIFGENPSGFGCLFVKKSS-ASVLS 369 (588)
Q Consensus 296 tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~-l--~l~~-~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~-~~~l~ 369 (588)
||.+.|+++| ++|+++|++++||||+.++.-+.+ . .+.. .++|++++|+|||++. |.|+|+|++|+.. .+.+.
T Consensus 278 tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~-P~g~G~llvr~~~~~~~~~ 356 (522)
T TIGR03799 278 TGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYV-PMGAGMVLFKDPALMSAIE 356 (522)
T ss_pred CCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCc-CcccEEEEEeCHHHHHHhc
Confidence 9999999999 999999999999999876521111 0 0222 2599999999996654 9999999999753 34443
Q ss_pred CC--CCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Q 037063 370 GS--TSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALM 447 (588)
Q Consensus 370 ~~--~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~ 447 (588)
+. +....+.. ++ .+ ..+ + ||.+..+ ..+..+|+++...|++.+.++...|++++.+.|.
T Consensus 357 ~~~~Yl~~~~~~----------d~--~~-~~l-e-gsR~~~a----l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~ 417 (522)
T TIGR03799 357 HHAEYILRKGSK----------DL--GS-HTL-E-GSRPGMA----MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQ 417 (522)
T ss_pred cCcchhcCCCCC----------cc--cc-cee-e-cCcchHH----HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 31 10000100 00 00 134 4 4444333 3577899999999999999999999999999998
Q ss_pred cccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeec
Q 037063 448 NLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFD 482 (588)
Q Consensus 448 ~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~ 482 (588)
+ .|.++++.+. ..++|+|++..
T Consensus 418 ~---------~~~~el~~~p----~l~iv~Fr~~p 439 (522)
T TIGR03799 418 Q---------QPDFELVTEP----ELCLLTYRYVP 439 (522)
T ss_pred h---------CCCeEEecCC----CccEEEEEEeC
Confidence 8 4789999863 46799999753
No 91
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=7.9e-20 Score=193.19 Aligned_cols=286 Identities=13% Similarity=0.119 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
..++|+.+++++++++++ |++|+|+++++.+++.++ +++||+|++....+. .....+...|+++..++.+ +
T Consensus 66 ~~~lr~~ia~~~~~~~~~--i~~t~G~~~~l~~~~~~~-~~~gd~v~~~~p~y~----~~~~~~~~~g~~~~~~~~~--~ 136 (359)
T PRK03158 66 APELRTKVAKHLGVDEEQ--LLFGAGLDEVIQMISRAL-LNPGTNTVMAEPTFS----QYRHNAIIEGAEVREVPLK--D 136 (359)
T ss_pred HHHHHHHHHHHhCCCHHH--EEECCCHHHHHHHHHHHH-hCCCCEEEEcCCCHH----HHHHHHHHcCCeEEEEecC--C
Confidence 358999999999998765 999999999999999998 899999776544332 1234556789999999986 4
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH--cCcEEEEeCCCcC----CCCCCCCC-C
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE--KGWHVLLDATALG----SKDMDTLG-L 332 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~--~g~~vvvDaa~~~----~~d~~~l~-l 332 (588)
+.++.+++++.++ ++++++++++++||||..+|.++| ++++. +|+++|+|.+..- +.....+. +
T Consensus 137 ~~~d~~~l~~~~~--------~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 208 (359)
T PRK03158 137 GGHDLEAMLKAID--------EQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLL 208 (359)
T ss_pred CCcCHHHHHHhcC--------CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHH
Confidence 6789999988887 678999999999999999999998 87776 5999999998432 10001111 1
Q ss_pred CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 333 SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 333 ~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
......+++.|+.|.||.+...+|++++++++++.+...... .++..+.+
T Consensus 209 ~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~---------------------------~~~~~~~q--- 258 (359)
T PRK03158 209 EKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIARPP---------------------------FNTTRIAQ--- 258 (359)
T ss_pred HhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHhcCC---------------------------CCCCHHHH---
Confidence 122356888999999984334469999988887766433210 00111111
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHH
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~ 492 (588)
.++..+|+.-.. ++.+.+..+..++.+.+.|.++ ++.++. ..+..+.+.+. .+...
T Consensus 259 -~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~-----~~g~~i~~~~~------~~~~~ 314 (359)
T PRK03158 259 -YAAIAALEDQAF--LKECVEKNAEGLEQYYAFCKEY----------GLFYYP-----SQTNFIFVDTG------RDANE 314 (359)
T ss_pred -HHHHHHhcCHHH--HHHHHHHHHHHHHHHHHHHHHC----------CCeeCC-----CcCcEEEEECC------CCHHH
Confidence 222334431111 3445555666677777777763 244432 22444444332 23556
Q ss_pred HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 493 VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 493 v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
+.+.|.++||.+++|.... ..++||+|++ +.+|+++++++|++++
T Consensus 315 ~~~~l~~~gv~v~~g~~f~--------------------------~~~~iRi~~~---~~~~~~~l~~al~~~~ 359 (359)
T PRK03158 315 LFEALLKKGYIVRSGAALG--------------------------FPTGVRITIG---LKEQNDKIIELLKELL 359 (359)
T ss_pred HHHHHHHCCeEEeeCCCCC--------------------------CCCeEEEecC---CHHHHHHHHHHHHHhC
Confidence 6666667899999874321 0128999987 8999999999998863
No 92
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=4.7e-20 Score=195.59 Aligned_cols=162 Identities=19% Similarity=0.134 Sum_probs=127.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....+.++++||++.|. + .+++|+|+++|+.+++.++ +++||+|++....+...+..+...+...|+++..++.
T Consensus 52 npt~~~Le~~lA~leg~--e--~ivvt~gg~~Ai~~~l~al-l~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~- 125 (388)
T PRK08861 52 NPNRGLLEQTLSELESG--K--GAVVTNCGTSALNLWVSAL-LGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ- 125 (388)
T ss_pred CchHHHHHHHHHHHhCC--C--eEEEECCHHHHHHHHHHHH-cCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC-
Confidence 34467899999999996 2 3999999999999999999 8999997765443332333333445567888888753
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFK 336 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~ 336 (588)
.+.++++++++ ++|++|++++++|+||.++|+++| ++|+++|++|++|.++..|....+++ .+
T Consensus 126 -----~d~e~l~~~i~--------~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl~---~G 189 (388)
T PRK08861 126 -----SDAAALDAALA--------KKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKPLE---LG 189 (388)
T ss_pred -----CCHHHHHHhcC--------cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCCcc---cC
Confidence 37788998887 789999999999999999999999 99999999999999988773234443 24
Q ss_pred CcEEEeccCccCCCCCCc--eEEEEEeC
Q 037063 337 PDFLICSFYKIFGENPSG--FGCLFVKK 362 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G--~G~L~v~~ 362 (588)
+|+++.|+||++|. |.+ .|+++.++
T Consensus 190 aDivv~S~tK~l~G-~~d~~gG~i~~~~ 216 (388)
T PRK08861 190 ADFVIHSTTKYING-HSDVIGGVLITKT 216 (388)
T ss_pred CCEEEeecceeccC-CCcceeEEEEecH
Confidence 99999999997773 544 46666654
No 93
>PRK08960 hypothetical protein; Provisional
Probab=99.87 E-value=7.7e-20 Score=195.30 Aligned_cols=336 Identities=12% Similarity=0.076 Sum_probs=208.8
Q ss_pred CCeeeecCCCCC-CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHG-LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRI 188 (588)
Q Consensus 110 ~~~vyLD~a~~g-l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~i 188 (588)
.+.++||.+..+ +.|..+++++.+.+...... |+. ..-..++|+.|
T Consensus 32 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~-------------------------------Y~~--~~g~~~lr~~i 78 (387)
T PRK08960 32 HDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTR-------------------------------YTA--ARGLPALREAI 78 (387)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCc-------------------------------cCC--CCCCHHHHHHH
Confidence 578999999988 46888888876555321100 000 00124677777
Q ss_pred HHHhC------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCC-C
Q 037063 189 MDFMN------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWP-N 260 (588)
Q Consensus 189 a~~lg------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~-~ 260 (588)
+++++ +++++ |++|+|+++|+.+++.++ +++||+|++ ...|+. .. ..++..|++++.++++.+ +
T Consensus 79 a~~~~~~~g~~~~~~~--i~it~G~~~al~~~~~~~-~~~gd~vlv~~p~y~~-~~----~~~~~~g~~~~~v~~~~~~~ 150 (387)
T PRK08960 79 AGFYAQRYGVDVDPER--ILVTPGGSGALLLASSLL-VDPGKHWLLADPGYPC-NR----HFLRLVEGAAQLVPVGPDSR 150 (387)
T ss_pred HHHHHHHhCCCCChhh--EEEccCcHHHHHHHHHHh-cCCCCEEEEcCCCCcc-hH----HHHHhcCCeEEEEecCcccC
Confidence 77763 55554 999999999999999999 899999665 445543 22 334557999999998733 3
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCc-CCCC--CCCCCCC
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATAL-GSKD--MDTLGLS 333 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~-~~~d--~~~l~l~ 333 (588)
+.++.++++++++ ++++++++++++||||..+|.+++ ++|+++|+++++|.+.. ...+ ..++ +.
T Consensus 151 ~~~d~~~l~~~~~--------~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~-~~ 221 (387)
T PRK08960 151 YQLTPALVERHWN--------ADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASV-LE 221 (387)
T ss_pred CCCCHHHHHHHhC--------ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCh-hh
Confidence 4689999999887 678899999999999999998765 56899999999999732 1100 1111 11
Q ss_pred CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhH
Q 037063 334 LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSK 413 (588)
Q Consensus 334 ~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~ 413 (588)
...--+++.|++|.+|.+..++|++++++++++.+...... + ..++..+.+
T Consensus 222 ~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~------------------------~-~~~~s~~~q---- 272 (387)
T PRK08960 222 VDDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVPELEKLAQN------------------------L-YISASTPAQ---- 272 (387)
T ss_pred ccCCEEEEeecccccCCcccEEEEEEcCHHHHHHHHHHHhh------------------------h-ccCCCHHHH----
Confidence 11123678899999984344599999998887765432211 0 011111111
Q ss_pred HHHHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE-EEEeecCCCCCcCHH
Q 037063 414 LVECKGLDH-ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL-AFNVFDWNGTRIDPA 491 (588)
Q Consensus 414 ~al~~aL~~-l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv-~f~~~~~~g~~i~~~ 491 (588)
.++..+|+. .... +++..+..+..++.+.+.|.++ | +.+... ..++.. -+.+.+. ..+..
T Consensus 273 ~a~~~~l~~~~~~~-l~~~~~~~~~~~~~l~~~L~~~-------~---~~~~~~----p~g~~f~~~~~~~~---~~~~~ 334 (387)
T PRK08960 273 HAALACFEPETLAI-LEARRAEFARRRDFLLPALREL-------G---FGIAVE----PQGAFYLYADISAF---GGDAF 334 (387)
T ss_pred HHHHHHhhcCcHHH-HHHHHHHHHHHHHHHHHHHHhc-------C---CcCCcC----CCeeEEEEEecccc---CCCHH
Confidence 122233321 1111 3445555566677777777763 1 222111 123333 3344321 13345
Q ss_pred HHH-HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 492 LVQ-KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 492 ~v~-~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
.+. ++++++||.+.+|..+... .+..++|++++. +.+++...++.|+++++
T Consensus 335 ~~~~~ll~~~gi~v~pg~~f~~~-----------------------~~~~~iRi~~~~--~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 335 AFCRHFLETEHVAFTPGLDFGRH-----------------------QAGQHVRFAYTQ--SLPRLQEAVERIARGLR 386 (387)
T ss_pred HHHHHHHHhCCEEEcCchHhCCC-----------------------CCCCeEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 554 5567899999988544100 111389999985 56777777777776654
No 94
>PLN02822 serine palmitoyltransferase
Probab=99.87 E-value=1.3e-19 Score=197.95 Aligned_cols=353 Identities=12% Similarity=0.102 Sum_probs=230.3
Q ss_pred CCeeeecCCCC---CC-CCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHH
Q 037063 110 NNYVCFDYIGH---GL-FSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIR 185 (588)
Q Consensus 110 ~~~vyLD~a~~---gl-~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r 185 (588)
.+.-|+|.++. ++ -++.+.++..+.+.. ++.- ++. ++..||. .+...+++
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~--~G~g-~~g---------------------~r~~yg~--~~~~~~Le 160 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEK--YGVG-SCG---------------------PRGFYGT--IDVHLDCE 160 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHH--hCCC-Ccc---------------------cCccccC--HHHHHHHH
Confidence 35567777755 22 467777777666643 2211 111 1122333 57788999
Q ss_pred HHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCH
Q 037063 186 KRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHS 265 (588)
Q Consensus 186 ~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~ 265 (588)
++|+++++.+ + .|+|++|.+ ++..++.++ .++||.|+.+..+|..... .++..|+++++++.+ |.
T Consensus 161 e~La~~~~~~-~--~i~~s~G~~-a~~sai~a~-~~~gd~Ii~d~~~H~s~~~----~~~ls~~~~~~~~~n------d~ 225 (481)
T PLN02822 161 TKIAKFLGTP-D--SILYSYGLS-TIFSVIPAF-CKKGDIIVADEGVHWGIQN----GLYLSRSTIVYFKHN------DM 225 (481)
T ss_pred HHHHHHhCCC-C--EEEECCHHH-HHHHHHHHh-CCCCCEEEEeCCccHHHHH----HHHHcCCeEEEECCC------CH
Confidence 9999999974 3 599998877 567788888 8899998877666543322 234457888888764 45
Q ss_pred HHHHHHHhhhccc-cCCCcc-eEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC-C------CCCCCCCCC
Q 037063 266 GKLMKKIVGKRKK-KKKKKR-GLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK-D------MDTLGLSLF 335 (588)
Q Consensus 266 e~l~~~i~~~~~~-~~~~~t-~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~-d------~~~l~l~~~ 335 (588)
++++..+.+.+.. ..++++ ++|++..+++++|.+.|+++| ++|+++|+++++|.++..+. . ...+++...
T Consensus 226 ~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~ 305 (481)
T PLN02822 226 ESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIE 305 (481)
T ss_pred HHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCC
Confidence 6676666521000 011334 799999999999999999999 99999999999999987542 0 122344333
Q ss_pred CCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHH
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLV 415 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~a 415 (588)
.+|+++.|+.|.+| +.| |+++.+++.++.++....+ . .| ....+++.. ++
T Consensus 306 ~~dii~~s~sKalg--~~G-G~i~g~~~ii~~~~~~~~~---~-------------------~f-sa~lPp~~~----~A 355 (481)
T PLN02822 306 KIDIITAAMGHALA--TEG-GFCTGSARVVDHQRLSSSG---Y-------------------VF-SASLPPYLA----SA 355 (481)
T ss_pred CCeEEEecchhhhh--hCC-eEEEcCHHHHHHHHhcCCc---e-------------------ee-ccccCHHHH----HH
Confidence 58999999999998 567 9999998887766532211 1 11 011122222 33
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCc-C----H
Q 037063 416 ECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI-D----P 490 (588)
Q Consensus 416 l~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i-~----~ 490 (588)
..++|+.++.. +.+.++++++++++++.|.++ +++.+..+ ..++++.+.+.+..+... + .
T Consensus 356 a~~aL~~l~~~--~~~~~~l~~~~~~l~~~L~~~---------~g~~~~~~----~~spi~~l~l~~~~~~~~~~~~~~~ 420 (481)
T PLN02822 356 AITAIDVLEDN--PSVLAKLKENIALLHKGLSDI---------PGLSIGSN----TLSPIVFLHLEKSTGSAKEDLSLLE 420 (481)
T ss_pred HHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHhc---------CCcccCCC----CCCCEEEEEeCCCcccccchHHHHH
Confidence 34677766542 678889999999999999874 34555443 346788888754211100 1 1
Q ss_pred HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 491 ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 491 ~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
+.+.++++++||.+..+..-. + .. ..+.+.+|++++..+|.+||+++++.|++++.+.
T Consensus 421 ~~~~~Ll~e~GV~v~~~~~~~--~------------~~-------~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 421 HIADRMLKEDSVLVVVSKRST--L------------DK-------CRLPVGIRLFVSAGHTESDILKASESLKRVAASV 478 (481)
T ss_pred HHHHHHHhcCCEEEEeeCCCC--c------------CC-------CCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 234556668899988653210 0 00 0112379999999999999999999999987653
No 95
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.87 E-value=6.5e-20 Score=197.19 Aligned_cols=298 Identities=11% Similarity=0.040 Sum_probs=194.8
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhC-CCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESY-PFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~-~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.+...++++++++++|. ++ .++|++| ++|...++..+ ..++++.|+.+..+|+..... ++..|+++..++.
T Consensus 90 ~~~~~~l~~~la~~~g~-~~--~~~~~sG-~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~----~~~~~~~~~~~~~ 161 (407)
T PRK09064 90 NHYHVELERELADLHGK-EA--ALVFTSG-YVSNDATLSTLAKLIPDCVIFSDELNHASMIEG----IRRSRCEKHIFRH 161 (407)
T ss_pred HHHHHHHHHHHHHHhCC-Cc--EEEECcH-HHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHH----HHHcCCcEEEECC
Confidence 46678999999999995 22 3555555 45544444443 234666666554444433333 2445777665543
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC---CC----C
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK---DM----D 328 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~---d~----~ 328 (588)
.|.++++++++ ....+++++|++++++|++|.+.|+++| ++|+++|+++++|+++..+. .- .
T Consensus 162 ------~d~~~le~~l~----~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~ 231 (407)
T PRK09064 162 ------NDVAHLEELLA----AADPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAE 231 (407)
T ss_pred ------CCHHHHHHHHH----hccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHH
Confidence 36788888886 1122468999999999999999999999 99999999999999987431 00 1
Q ss_pred CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc
Q 037063 329 TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS 408 (588)
Q Consensus 329 ~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~ 408 (588)
..++. ..+|+++.+++|.|| +.| |+++.++++++.+.....+ . .| ..+.++.
T Consensus 232 ~~~~~-~~~div~~t~sKa~g--~~G-G~~~~~~~~~~~l~~~~~~---~-------------------~~-t~~~~~~- 283 (407)
T PRK09064 232 RDGLM-DRIDIIEGTLAKAFG--VMG-GYIAGSAALVDAVRSYAPG---F-------------------IF-TTSLPPA- 283 (407)
T ss_pred hcCCC-CCCeEEEEecchhhh--ccC-ceEecCHHHHHHHHHhCcc---c-------------------cc-cCcCCHH-
Confidence 11221 247999999999999 456 8888888777655432111 0 11 1112221
Q ss_pred chhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCc
Q 037063 409 GVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i 488 (588)
. .++..++++++++. +...+++..+++++.+.|.++ | ++++. ..++++.+.+.+. .
T Consensus 284 ~---~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~-------g---~~~~~-----~~~~iv~i~~~~~----~ 339 (407)
T PRK09064 284 I---AAAALASIRHLKES--NEERERHQERAAKLKAALDAA-------G---IPVMP-----NESHIVPVMVGDP----E 339 (407)
T ss_pred H---HHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-------C---CCCCC-----CCCCEEEEEeCCH----H
Confidence 1 14455788887764 445678889999999999885 2 33333 2367777766431 1
Q ss_pred CHHHHHHH-HHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 489 DPALVQKL-ADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 489 ~~~~v~~~-l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
....+.+. ++++||.++.... +.. ..|...||+|++.++|.+|++++++.|+++++
T Consensus 340 ~~~~l~~~L~~~~gi~v~~~~~--p~~---------------------~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~ 396 (407)
T PRK09064 340 KCKKASDMLLEEHGIYVQPINY--PTV---------------------PRGTERLRITPTPFHTDEMIDHLVEALVEVWA 396 (407)
T ss_pred HHHHHHHHHHHhCCEEEeeECC--CCC---------------------CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 23455554 4667999876311 000 02223899999999999999999999999876
Q ss_pred h
Q 037063 568 A 568 (588)
Q Consensus 568 ~ 568 (588)
+
T Consensus 397 ~ 397 (407)
T PRK09064 397 R 397 (407)
T ss_pred H
Confidence 4
No 96
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.87 E-value=4.4e-20 Score=194.03 Aligned_cols=316 Identities=14% Similarity=0.126 Sum_probs=220.1
Q ss_pred hHHHHHHHHHHHHHhCCCCCCce-EEEecCHHHHHHHHHHhCCC-CCCCeEEEcCCCchhHHHHHHHHHHhcCC-EEEEE
Q 037063 178 SELESKIRKRIMDFMNISEDDYT-LVFTANQSSAFKLLAESYPF-YSNPRLLTVYDHENEAAALMIESSKKRGA-RVSSA 254 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~-vvft~g~T~al~lv~~s~~~-~~gd~ll~~~e~~s~~~~~~~~~a~~~G~-~v~~v 254 (588)
.+++.++++.+.++|+++ ++|. +++++++|.++..++.++ + ++|++++... .+ .-.|+.++|++.|+ ++..+
T Consensus 38 ~~i~~e~~~~L~~l~~~~-~~~~v~~l~GsGT~a~Eaa~~nl-~~~~g~~vLv~g-~F--G~r~~~eia~~~g~~~v~~l 112 (374)
T TIGR01365 38 KEKLAEAIKKTREMLGVP-ADYLIGIVPASDTGAVEMALWSM-LGCRGVDVLAWE-SF--GKGWVTDVTKQLKLPDVRVL 112 (374)
T ss_pred HHHHHHHHHHHHHHhCCC-CCcEEEEECCchHHHHHHHHHHc-CCCCCCeEEEEC-HH--HHHHHHHHHHhcCCCCcEEE
Confidence 688999999999999984 3454 566899999999999998 7 4788866543 44 34554589999999 58888
Q ss_pred eccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCC
Q 037063 255 EFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLS 333 (588)
Q Consensus 255 ~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~ 333 (588)
..+|. ..+++++++. . .. |+++|..+.||+.+|+++| +.. ++++++||++++++ ..+++++
T Consensus 113 ~~~~g-~~~~~~~ve~--~--------~~---v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g--~~~l~~d 174 (374)
T TIGR01365 113 EAEYG-KLPDLKKVDF--K--------ND---VVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAF--AQDLDYH 174 (374)
T ss_pred cCCCC-CCCCHHHcCC--C--------CC---EEEecCCCchheecccccccccc--CCCcEEEEccchhc--CCCCChh
Confidence 87743 3578887761 1 11 6799999999999999887 433 48999999998887 5666666
Q ss_pred CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCC--CCCCCceEeeecCCCcccccccccccccccCCCCCccchh
Q 037063 334 LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGS--TSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVS 411 (588)
Q Consensus 334 ~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~--~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~ 411 (588)
. +|++++|.+|.+|. |.|+++++++++++++.+.. ++....+...... . ..... .. ...|++.+.+.
T Consensus 175 ~--iDv~~tgsQK~L~~-ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~-~-~~~~~-----~~-~~~t~~TP~v~ 243 (374)
T TIGR01365 175 K--LDVVTFSWQKVLGG-EGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKG-G-KLNKK-----IF-EGSTINTPSML 243 (374)
T ss_pred H--CcEEEEechhccCC-CCceEEEEECHHHHHHHhhcCCCCCChhhhccccc-c-chhhh-----hh-cCCCCCChHHH
Confidence 4 99999999998886 89999999999998765421 1110001000000 0 00000 00 11244444443
Q ss_pred hHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc-EEEEEeecCCC----
Q 037063 412 SKLVECKGLDHADAL-GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP-SLAFNVFDWNG---- 485 (588)
Q Consensus 412 ~~~al~~aL~~l~~~-G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~-iv~f~~~~~~g---- 485 (588)
.+.++..+|+.+.+. |++++.+|.+.+++.+++.++++ | .+.++... +..+++ ++++.+.+..-
T Consensus 244 ~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~l-------g--~l~~~~~~-~~~rS~tvt~v~~~~~~~~~~~ 313 (374)
T TIGR01365 244 CVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKN-------N--WIHFLAET-PEIRSNTSVCLKVVDPAIDALD 313 (374)
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHC-------C--CcccCCCC-hhhcCCCeEEEEeCCccccccc
Confidence 347777888888776 89999999999999999999997 2 24555431 124554 45566643210
Q ss_pred --CCcC-HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHH
Q 037063 486 --TRID-PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 486 --~~i~-~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l 562 (588)
-..+ ...+.+.+.++||.+..|.... .| ..+||+....-+.+||++++++|
T Consensus 314 ~~~~~~~~~~~~~~l~~~gi~i~~G~~~~-------------------------~~-~~fRIg~~G~i~~~di~~l~~~l 367 (374)
T TIGR01365 314 EDAQADFAKELISTLEKEGVAYDIGSYRD-------------------------AP-SGLRIWCGATVEKSDLECLCPWL 367 (374)
T ss_pred cchhhHHHHHHHHHHHHCCEEEecccccc-------------------------CC-CceEEecCCcCCHHHHHHHHHHH
Confidence 0011 4678888988999998773210 11 28999998888999999999997
Q ss_pred H
Q 037063 563 S 563 (588)
Q Consensus 563 ~ 563 (588)
.
T Consensus 368 ~ 368 (374)
T TIGR01365 368 D 368 (374)
T ss_pred H
Confidence 5
No 97
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.87 E-value=8.8e-20 Score=195.84 Aligned_cols=298 Identities=11% Similarity=0.045 Sum_probs=196.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.+...++++++++++|.+ + .++.+++++|+..++..+. ..+++.|+++..+|..... .++..|+++..++.
T Consensus 89 ~~~~~~Le~~la~~~g~~--~--~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~----~~~~~g~~~~~~~~ 160 (402)
T TIGR01821 89 NIPHVELEAELADLHGKE--S--ALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIE----GIRHSGAEKFIFRH 160 (402)
T ss_pred cHHHHHHHHHHHHHhCCC--e--EEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHH----HHHHcCCeEEEECC
Confidence 455679999999999963 2 5555666888777777652 2366667665433432332 23456887766543
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC--C-----CC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK--D-----MD 328 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~--d-----~~ 328 (588)
.|.++++++++. ...+++++|++.+++|++|.+.|+++| ++|+++|+++++|+++..+. . ..
T Consensus 161 ------~d~~~l~~~l~~----~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~ 230 (402)
T TIGR01821 161 ------NDVAHLEKLLQS----VDPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAE 230 (402)
T ss_pred ------CCHHHHHHHHHh----ccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccch
Confidence 267888888861 122368999999999999999999999 99999999999999987542 0 01
Q ss_pred CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc
Q 037063 329 TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS 408 (588)
Q Consensus 329 ~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~ 408 (588)
..++. ..+|+++.++.|.|| ..| |+++.++++++.+.....+ . .| .++.+..
T Consensus 231 ~~~~~-~~~div~~t~sKa~g--~~G-G~i~~~~~~~~~l~~~~~~---~-------------------~~--t~~~~~~ 282 (402)
T TIGR01821 231 RDGLM-HRIDIIEGTLAKAFG--VVG-GYIAASRKLIDAIRSYAPG---F-------------------IF--TTSLPPA 282 (402)
T ss_pred hccCC-CCCeEEEEechhhhc--cCC-ceeecCHHHHHHHHHhCcC---c-------------------ee--cCcCCHH
Confidence 11111 237899999999999 345 7887787777665432111 0 11 1112222
Q ss_pred chhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCc
Q 037063 409 GVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i 488 (588)
. .++..++|+.+.+. +.+.++...+++++.+.|+++ | ++++. ..++++.+.+.+. .
T Consensus 283 ~---~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-------g---~~~~~-----~~~~i~~i~~~~~----~ 338 (402)
T TIGR01821 283 I---AAGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-------G---IPVIP-----NPSHIVPVIIGDA----A 338 (402)
T ss_pred H---HHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-------C---CCcCC-----CCCCEEEEEeCCH----H
Confidence 2 24555788877764 566777788999999999885 2 23333 2467777765431 1
Q ss_pred CHHHHHHH-HHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 489 DPALVQKL-ADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 489 ~~~~v~~~-l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
....+.+. ++++||.++...... . ..|...||+|++.++|.|||+++++.|+++++
T Consensus 339 ~a~~~~~~L~~~~Gi~v~~~~~p~----------------~-------~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~ 395 (402)
T TIGR01821 339 LCKKVSDLLLNKHGIYVQPINYPT----------------V-------PRGTERLRITPTPAHTDKMIDDLVEALLLVWD 395 (402)
T ss_pred HHHHHHHHHHhcCCEEEEeECCCC----------------C-------CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 13345544 466799987642110 0 02223899999999999999999999999876
Q ss_pred h
Q 037063 568 A 568 (588)
Q Consensus 568 ~ 568 (588)
+
T Consensus 396 ~ 396 (402)
T TIGR01821 396 R 396 (402)
T ss_pred H
Confidence 4
No 98
>PRK07324 transaminase; Validated
Probab=99.87 E-value=6.5e-20 Score=194.81 Aligned_cols=296 Identities=17% Similarity=0.183 Sum_probs=194.8
Q ss_pred HHHHHHHHHHhC-CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 182 SKIRKRIMDFMN-ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 182 ~~~r~~ia~~lg-a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
.++|+.|+++++ +++++ |++|+|+++|+.+++.++ +.+||+|++....+. .....++..|++++.++.+..+
T Consensus 65 ~~lr~~ia~~~~~~~~~~--vi~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~----~~~~~~~~~g~~v~~v~~~~~~ 137 (373)
T PRK07324 65 PEFKEAVASLYQNVKPEN--ILQTNGATGANFLVLYAL-VEPGDHVISVYPTYQ----QLYDIPESLGAEVDYWQLKEEN 137 (373)
T ss_pred HHHHHHHHHHhcCCChhh--EEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCch----hHHHHHHHcCCEEEEEeccccc
Confidence 379999999885 66654 999999999999999999 899999876554432 2245667889999999987433
Q ss_pred -CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcC-CCC--CCCCCC
Q 037063 261 -LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALG-SKD--MDTLGL 332 (588)
Q Consensus 261 -~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~-~~d--~~~l~l 332 (588)
..+|.+++++++. +++++|++++++||||..+| +++| ++|+++|+++++|.+... ..+ ..++ .
T Consensus 138 ~~~~d~~~l~~~~~--------~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~-~ 208 (373)
T PRK07324 138 GWLPDLDELRRLVR--------PNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSI-A 208 (373)
T ss_pred CCCCCHHHHHHhCC--------CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCCh-h
Confidence 3578999988887 68999999999999999999 6667 889999999999998322 110 1111 1
Q ss_pred CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 333 SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 333 ~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
+...-.+++.|++|.||++..++|+++.++++++.+...... .. .+...+.+
T Consensus 209 ~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~--~~-----------------------~~~~~~~q--- 260 (373)
T PRK07324 209 DLYEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDY--TM-----------------------ICAGVFDD--- 260 (373)
T ss_pred hccCCEEEEecchhhcCCccceeEEEecCHHHHHHHHHHhCc--EE-----------------------ecCChHHH---
Confidence 111234677899999985445689999988877766543311 00 00111111
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHH
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~ 492 (588)
.+...+|+..+.+ +++..+..+...+.+.+.|.+. +++.+..| .++...|...+.. ++...
T Consensus 261 -~~a~~~l~~~~~~-l~~~~~~~~~~~~~l~~~l~~~---------~~~~~~~p-----~gg~~~~i~~~~~---~~~~~ 321 (373)
T PRK07324 261 -MLASLALEHRDAI-LERNRKIVRTNLAILDEWVAKE---------PRVSYVKP-----KAVSTSFVKLDVD---MPSED 321 (373)
T ss_pred -HHHHHHHcCHHHH-HHHHHHHHHHHHHHHHHHHhcC---------CCceEECC-----CceEEEEEEeCCC---CCHHH
Confidence 1222344322222 3444444455556666666652 34555544 2333333322211 34444
Q ss_pred H-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 493 V-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 493 v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+ .+++++.||.+.+|.... ..+ +||+|++. +.+.+...++.|++++++
T Consensus 322 ~~~~ll~~~gv~v~pg~~F~------------------------~~~--~iRis~~~--~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 322 FCLKLLKETGVLLVPGNRFD------------------------LEG--HVRIGYCC--DTETLKKGLKKLSEFLRE 370 (373)
T ss_pred HHHHHHHhcCEEEECccccC------------------------CCC--eEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 4 566788999999884320 022 89999874 688899999999888764
No 99
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.87 E-value=1.7e-19 Score=192.30 Aligned_cols=296 Identities=12% Similarity=0.063 Sum_probs=198.9
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
.++.+++++++++++|.+ ..|++|+| ++++.+++.++ +++||.|++...+|..... .++..|+++..++
T Consensus 77 ~~l~~~l~~~l~~~~g~~---~~i~~~sG-~~a~~~a~~~~-~~~gd~vi~~~~~~~~~~~----~~~~~g~~~~~~~-- 145 (385)
T TIGR01825 77 LRLHEELEEKLAKFKKTE---AALVFQSG-FNTNQGVLSAL-LRKGDIVLSDELNHASIID----GLRLTKATKKIYK-- 145 (385)
T ss_pred cHHHHHHHHHHHHHhCCC---cEEEECcH-HHHHHHHHHHh-CCCCCEEEEEccccHHHHH----HHHhcCCceEEeC--
Confidence 567889999999999973 24777777 55666777777 8999997755443332222 2234677776553
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC-CC------CCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS-KD------MDT 329 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~-~d------~~~ 329 (588)
.+|.+++++.+.+ ...+++++|+++++.|+||.+.|+++| ++|+++|+++|+|+++..+ .+ ...
T Consensus 146 ----~~d~~~l~~~l~~----~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~ 217 (385)
T TIGR01825 146 ----HADMDDLDRVLRE----NPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHH 217 (385)
T ss_pred ----CCCHHHHHHHHHh----hccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhh
Confidence 3678889888862 222478999999999999999999999 9999999999999997543 11 011
Q ss_pred CCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC-CCcc
Q 037063 330 LGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE-SSIS 408 (588)
Q Consensus 330 l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT-~~~~ 408 (588)
+++. ...|+++.|++|.+| ..| |+++.+++.++.+...... + ..++ .+..
T Consensus 218 ~~~~-~~~~i~~~s~sK~~~--~~g-G~~~~~~~~~~~~~~~~~~------------------------~-~~~~~~~~~ 268 (385)
T TIGR01825 218 FGLE-DKVDIQVGTLSKAIG--VVG-GYAAGHKELIEYLKNRARP------------------------F-LFSTAQPPA 268 (385)
T ss_pred cCCC-cCCcEEEEeccHHhh--cCC-CEEecCHHHHHHHHHhCcc------------------------c-cccCCCCHH
Confidence 3333 347999999999998 445 8888887777665422100 0 1111 1111
Q ss_pred chhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCc
Q 037063 409 GVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i 488 (588)
. .+++.++++.+.+. .++.++..++++++.+.|.++ | ++++.+ .++++.+.+... .
T Consensus 269 ~---~~a~~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~-------g---~~~~~~-----~~~~~~~~~~~~----~ 324 (385)
T TIGR01825 269 V---VAALAAAVDELQRS--PELMERLWDNTRFFKAGLGKL-------G---YDTGGS-----ETPITPVVIGDE----K 324 (385)
T ss_pred H---HHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-------C---CCCCCC-----CCCEEEEEECCH----H
Confidence 1 24556777766543 456777788899999999875 2 334433 245666654321 1
Q ss_pred CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 489 DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 489 ~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+...+.+.|.++||.++.+.+... ..|...||++++++++.||++++++.|++++++
T Consensus 325 ~~~~~~~~L~~~gi~v~~~~~~~~-----------------------~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 325 AAQEFSRRLFDEGIFAQSIVFPTV-----------------------PRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred HHHHHHHHHHHCCcEEcccCCCCC-----------------------CCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 244566666566999864432210 022238999999999999999999999998754
No 100
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.87 E-value=7.1e-20 Score=195.96 Aligned_cols=169 Identities=14% Similarity=0.097 Sum_probs=133.1
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....+++++.+++++|++ + .++++|++.|+.+++.++ +++||+|++....+.....+....++..|++++.++.+
T Consensus 64 ~p~~~~le~~lA~l~g~~---~-~i~~~sG~~Al~~~l~~l-l~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~ 138 (403)
T PRK07503 64 NPTLALLEQRMASLEGGE---A-AVALASGMGAITATLWTL-LRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT 138 (403)
T ss_pred CchHHHHHHHHHHHhCCC---c-EEEEcCHHHHHHHHHHHH-cCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCC
Confidence 345678999999999985 2 466668889999999888 89999977654443334444455667789999998763
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFK 336 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~ 336 (588)
++++++++++ ++|++|++++++|++|...|+++| ++|+++|+++|+|+++..+....+++ +.
T Consensus 139 ------d~~~l~~~i~--------~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l~---~g 201 (403)
T PRK07503 139 ------DPAALKAAIS--------DKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPLE---LG 201 (403)
T ss_pred ------CHHHHHHhcC--------ccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCchh---hC
Confidence 6788999887 689999999999999999999999 99999999999999987763233332 34
Q ss_pred CcEEEeccCccCCCCCCc--eEEEEEeCcchhccc
Q 037063 337 PDFLICSFYKIFGENPSG--FGCLFVKKSSASVLS 369 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l~ 369 (588)
+|+++.|++|++|. +.+ .|+++.+++++++++
T Consensus 202 ~Di~v~S~tK~l~g-~gd~~gG~v~~~~~l~~~l~ 235 (403)
T PRK07503 202 ADLVVHSATKYLGG-HGDITAGLVVGGKALADRIR 235 (403)
T ss_pred CCEEEccccccccC-CCceeEEEEEcCHHHHHHHH
Confidence 89999999998882 322 788887777766664
No 101
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.87 E-value=3.8e-19 Score=191.00 Aligned_cols=305 Identities=12% Similarity=0.080 Sum_probs=195.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCC-ceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDD-YTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e-~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++.+.+.+.+++++|++.+. .+|++|+|+++++.+++.++ +++||+|++....+. .....++..|++++.+++
T Consensus 81 ~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l-~~~Gd~Vlv~~P~y~----~~~~~~~~~g~~v~~v~~ 155 (405)
T PRK06207 81 ADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAAT-VARGDKVAIVQPDYF----ANRKLVEFFEGEMVPVQL 155 (405)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCch----hHHHHHHHcCCEEEEEec
Confidence 455666667777777854332 35999999999999999999 899999775544332 123566778999999987
Q ss_pred cC----CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC----C
Q 037063 257 AW----PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG----S 324 (588)
Q Consensus 257 ~~----~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~----~ 324 (588)
+. .+..+++++|++++. +++++|++++++||||..++.++ | ++|+++|++||+|.+..- +
T Consensus 156 ~~~~~~~~~~~d~~~l~~~~~--------~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~ 227 (405)
T PRK06207 156 DYLSADKRAGLDLDQLEEAFK--------AGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDG 227 (405)
T ss_pred cccCcccCCCcCHHHHHHhhh--------hcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC
Confidence 52 246789999999987 67899999999999999999655 5 778999999999998332 1
Q ss_pred C---CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccccccccc
Q 037063 325 K---DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSK 401 (588)
Q Consensus 325 ~---d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e 401 (588)
. .+..++. ....-+++.|++|.||.+..++|+++.++++++.+....... .
T Consensus 228 ~~~~~~~~~~~-~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~~~~~-------------------------~ 281 (405)
T PRK06207 228 TSYTHLRALPI-DPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKLQAIV-------------------------S 281 (405)
T ss_pred CCCCchhcCCC-CcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHHHhHh-------------------------c
Confidence 1 0111111 011237888999999854455999999888776664322100 0
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEee
Q 037063 402 FPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVF 481 (588)
Q Consensus 402 ~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~ 481 (588)
.++..+.+ .++..+|+.-... +++..++.++.++++.+.|.++ ++++++.| ..|..+-+.+.
T Consensus 282 ~~~~~~~q----~a~~~~l~~~~~~-~~~~~~~~~~~r~~l~~~L~~~---------~~~~~~~p----~gg~fl~~~l~ 343 (405)
T PRK06207 282 LRAAGYSQ----AVLRTWFSEPDGW-MKDRIARHQAIRDDLLRVLRGV---------EGVFVRAP----QAGSYLFPRLP 343 (405)
T ss_pred cCCCHHHH----HHHHHHHhCcHHH-HHHHHHHHHHHHHHHHHHHhcC---------CCceecCC----CeeEEEEEeCc
Confidence 01111111 2223333210010 3444455566677777777663 34555433 12334444443
Q ss_pred cCCCCCcCHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 482 DWNGTRIDPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 482 ~~~g~~i~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
.. .++...+.+.| +++||.+.+|.... . .+.+++|+|++. +.++++..++
T Consensus 344 ~~---~~~~~~~~~~l~~~~gV~v~pG~~F~----------------~--------~~~~~~Ris~~~--~~~~l~~al~ 394 (405)
T PRK06207 344 RL---AVSLHDFVKILRLQAGVIVTPGTEFS----------------P--------HTADSIRLNFSQ--DHAAAVAAAE 394 (405)
T ss_pred cc---CCCHHHHHHHHHHhcCEEEeCchHhC----------------C--------CCCCeEEEEecC--CHHHHHHHHH
Confidence 21 13455565555 57899999884321 0 112389999985 6789888888
Q ss_pred HHHHhhhh
Q 037063 561 FVSRFLDA 568 (588)
Q Consensus 561 ~l~~~l~~ 568 (588)
.|.+++++
T Consensus 395 rl~~~l~~ 402 (405)
T PRK06207 395 RIAQLIER 402 (405)
T ss_pred HHHHHHHH
Confidence 88887754
No 102
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.87 E-value=1.4e-19 Score=194.83 Aligned_cols=304 Identities=14% Similarity=0.099 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEEEcC-CCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLLTVY-DHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll~~~-e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
+...+++++|++++|.+ ..|+|++| ++|+..++..+. ..+|+.|+++. .|.+ .+ ..++..|+++..++.
T Consensus 91 ~~~~~Le~~la~~~g~~---~~i~~~sG-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s-~~----~~~~~~g~~~~~~~~ 161 (410)
T PRK13392 91 HPHVLLERELADLHGKE---SALLFTSG-YVSNDAALSTLGKLLPGCVILSDALNHAS-MI----EGIRRSGAEKQVFRH 161 (410)
T ss_pred HHHHHHHHHHHHHhCCC---CEEEECcH-HHHHHHHHHHHhcCCCCCEEEEehhhhHH-HH----HHHHHcCCeEEEEeC
Confidence 34679999999999963 34777766 556555555442 34788776654 4443 22 234567888877654
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC-CCCC-----
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK-DMDT----- 329 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~-d~~~----- 329 (588)
+ +.+++++.+. ....+++++|++++++|+||.+.|+++| ++|+++|+++++|+++..+. ....
T Consensus 162 ~------d~~~l~~~l~----~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~ 231 (410)
T PRK13392 162 N------DLADLEEQLA----SVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAE 231 (410)
T ss_pred C------CHHHHHHHHH----hccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhh
Confidence 2 4566777665 2223578999999999999999999999 99999999999999987542 0111
Q ss_pred -CCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc
Q 037063 330 -LGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS 408 (588)
Q Consensus 330 -l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~ 408 (588)
.++ ..++|+++.|++|.||. .| |++..++++++.++....+ . .| .+..+..
T Consensus 232 ~~~~-~~~~div~~tlsK~~g~--~G-G~~~~~~~~~~~l~~~~~~---~-------------------~~--s~~~~~~ 283 (410)
T PRK13392 232 RDGL-MDRIDMIQGTLAKAFGC--LG-GYIAASADLIDFVRSFAPG---F-------------------IF--TTALPPA 283 (410)
T ss_pred hccC-CCCCcEEEEEChHhhhc--cc-chhhcCHHHHHHHHHhCcc---h-------------------hc--cCcCCHH
Confidence 111 12478999999999994 35 7888887777655432211 0 00 0011111
Q ss_pred chhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCc
Q 037063 409 GVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i 488 (588)
. .+++.++|+.+... ....+++...++++++.|.++ | ++++. ..++++.+.+.+. .
T Consensus 284 ~---~~a~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-------g---~~~~~-----~~~~~~~i~~~~~----~ 339 (410)
T PRK13392 284 V---AAGATAAIRHLKTS--QTERDAHQDRVAALKAKLNAN-------G---IPVMP-----SPSHIVPVMVGDP----T 339 (410)
T ss_pred H---HHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-------C---CCCCC-----CCCCEEEEEeCCH----H
Confidence 1 25566788877664 344567778888999999875 2 33332 2456665555321 1
Q ss_pred CHHHHHH-HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 489 DPALVQK-LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 489 ~~~~v~~-~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
....+.+ +++++||.++.+..-. . ..|...||+|++.++|.||++++++.|+++++
T Consensus 340 ~~~~~~~~L~~~~GI~v~~~~~p~--~---------------------~~~~~~lRis~~~~~t~edid~l~~aL~~~~~ 396 (410)
T PRK13392 340 LCKAISDRLMSEHGIYIQPINYPT--V---------------------PRGTERLRITPTPLHDDEDIDALVAALVAIWD 396 (410)
T ss_pred HHHHHHHHHHHhCCEEEeeeCCCC--C---------------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 2344555 4567899998642100 0 02334899999999999999999999999876
Q ss_pred hhhcccccccc
Q 037063 568 ADFVEKERWRY 578 (588)
Q Consensus 568 ~~~~~~~~~~~ 578 (588)
+.-+ ..||-
T Consensus 397 ~~~~--~~~~~ 405 (410)
T PRK13392 397 RLEL--PRWRE 405 (410)
T ss_pred HcCC--ccchh
Confidence 5322 45553
No 103
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.87 E-value=5.3e-20 Score=196.82 Aligned_cols=298 Identities=14% Similarity=0.160 Sum_probs=196.2
Q ss_pred HHHHHHHHHh----C--CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 183 KIRKRIMDFM----N--ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 183 ~~r~~ia~~l----g--a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++|+.|++++ | ++++ .|++|+|+++|+.+++.++ +++||+|++....+... ...++..|++++.+++
T Consensus 74 ~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l-~~~g~~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~ 146 (391)
T PRK08361 74 ELREAIAEYYKKFYGVDVDVD--NVIVTAGAYEATYLAFESL-LEEGDEVIIPDPAFVCY----VEDAKIAEAKPIRIPL 146 (391)
T ss_pred HHHHHHHHHHHHHhCCCCCcc--cEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCCccc----HHHHHHcCCEEEEEec
Confidence 5666777665 4 5554 4999999999999999998 89999977544433212 3455668999999998
Q ss_pred cCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcC----CCCC
Q 037063 257 AWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALG----SKDM 327 (588)
Q Consensus 257 ~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~----~~d~ 327 (588)
+.+ ++.+|++++++.++ ++++++++++++|+||..+| +++| ++|+++++++|+|.+..- +...
T Consensus 147 ~~~~~~~~d~~~l~~~i~--------~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 218 (391)
T PRK08361 147 REENEFQPDPDELLELIT--------KRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKH 218 (391)
T ss_pred CCccCCCCCHHHHHHhcc--------cccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCC
Confidence 733 35699999999987 67899999999999999999 6667 889999999999998321 1101
Q ss_pred CCC-CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 328 DTL-GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 328 ~~l-~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
.++ .+ ....++++.|++|.||.+..++|++++++++++.+....... -.+++.
T Consensus 219 ~~~~~~-~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~ 272 (391)
T PRK08361 219 YPMIKY-APDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYI-------------------------IGNVAS 272 (391)
T ss_pred CCHhhc-CCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHHHHhhh-------------------------ccCCCh
Confidence 111 11 123578999999999942223999999888776553221000 001111
Q ss_pred ccchhhHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEE-EeecCC
Q 037063 407 ISGVSSKLVECKGLDHADA-LGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAF-NVFDWN 484 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~-~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f-~~~~~~ 484 (588)
+.+ .++..+|+.-.. ..++++.++.++..+.+.+.|+++ ++++++.| .++...+ .+.+.
T Consensus 273 ~~q----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~---------~~~~~~~p-----~g~~~~~~~l~~~- 333 (391)
T PRK08361 273 FVQ----IAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEM---------PHIKVFEP-----KGAFYVFANIDET- 333 (391)
T ss_pred HHH----HHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhC---------CCCeecCC-----CEEEEEEEECCCC-
Confidence 111 122233321100 025677777788888888988874 45666654 3444333 44321
Q ss_pred CCCcCHHHHHH-HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 485 GTRIDPALVQK-LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 485 g~~i~~~~v~~-~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
.++...+.. +++++||.+.+|..+. . .+.++||++++. +.++++..++.|+
T Consensus 334 --~~~~~~l~~~l~~~~gv~v~pg~~f~----------------~--------~~~~~iRi~~~~--~~~~l~~al~~l~ 385 (391)
T PRK08361 334 --GMSSEDFAEWLLEKARVVVIPGTAFG----------------K--------AGEGYIRISYAT--SKEKLIEAMERME 385 (391)
T ss_pred --CCCHHHHHHHHHHhCCEEEcCchhhC----------------C--------CCCCEEEEEecC--CHHHHHHHHHHHH
Confidence 144555554 5567899999884321 0 122389999884 6788999999888
Q ss_pred Hhhhh
Q 037063 564 RFLDA 568 (588)
Q Consensus 564 ~~l~~ 568 (588)
+++++
T Consensus 386 ~~l~~ 390 (391)
T PRK08361 386 KALEE 390 (391)
T ss_pred HHHhc
Confidence 87753
No 104
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.87 E-value=6.5e-20 Score=196.21 Aligned_cols=300 Identities=16% Similarity=0.133 Sum_probs=195.8
Q ss_pred HHHHHHHHHHh----C--CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 182 SKIRKRIMDFM----N--ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 182 ~~~r~~ia~~l----g--a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++|+.|++++ | ++++ +|++|+|+++|+.+++.++ +++||+|++....+. .+ ...++..|++++.++
T Consensus 71 ~~lr~~ia~~~~~~~~~~~~~~--~i~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~y~-~~---~~~~~~~g~~~~~~~ 143 (393)
T PRK05764 71 PELREAIAAKLKRDNGLDYDPS--QVIVTTGAKQALYNAFMAL-LDPGDEVIIPAPYWV-SY---PEMVKLAGGVPVFVP 143 (393)
T ss_pred HHHHHHHHHHHHHHhCCCCCHH--HEEEeCCcHHHHHHHHHHh-cCCCCEEEecCCCCc-ch---HHHHHHcCCEEEEEe
Confidence 46677777765 3 4444 4999999999999999998 899999765544332 12 345667899999999
Q ss_pred ccCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCCCcCC----C-
Q 037063 256 FAWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDATALGS----K- 325 (588)
Q Consensus 256 ~~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa~~~~----~- 325 (588)
.+.. +..+|+++++++++ +++++|++++++|+||..+|.+ +| ++|+++|+++++|.+.... .
T Consensus 144 ~~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~ 215 (393)
T PRK05764 144 TGEENGFKLTVEQLEAAIT--------PKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAE 215 (393)
T ss_pred cCcccCCcCCHHHHHHhhC--------ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCC
Confidence 8732 35688999999987 6789999999999999999854 56 7899999999999884321 0
Q ss_pred --CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCC
Q 037063 326 --DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP 403 (588)
Q Consensus 326 --d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G 403 (588)
....+.......++++.|+.|.+|.+..++|+++.++++++.+....... ..+
T Consensus 216 ~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~~~~~~-------------------------~~~ 270 (393)
T PRK05764 216 FTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKLQSHS-------------------------TSN 270 (393)
T ss_pred cccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHHHHHHHHHHhhc-------------------------ccC
Confidence 11122112234678999999999842234899998888777654322110 011
Q ss_pred CCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE-EEeec
Q 037063 404 ESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA-FNVFD 482 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~-f~~~~ 482 (588)
+..+.+ .++..+|+.... -+++..++.....+.+.+.|.++ +++.++.| .++... +.+..
T Consensus 271 ~~~~~q----~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~-----~g~~~~~~~~~~ 331 (393)
T PRK05764 271 PTSIAQ----YAAVAALNGPQD-EVEEMRQAFEERRDLMVDGLNEI---------PGLECPKP-----EGAFYVFPNVSK 331 (393)
T ss_pred CChHHH----HHHHHHHcCChH-HHHHHHHHHHHHHHHHHHHHhhC---------CCCcccCC-----CcceEEEEeccc
Confidence 111211 222233331111 14556666677777888888763 45555543 344333 33432
Q ss_pred CCC-CCcCHHHH-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 483 WNG-TRIDPALV-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 483 ~~g-~~i~~~~v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
... ...+..++ ..+++++||.+++|..+. ..++||+|++. +.++++++++
T Consensus 332 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~--------------------------~~~~vRis~~~--~~~~~~~~i~ 383 (393)
T PRK05764 332 LLGKSITDSLEFAEALLEEAGVAVVPGIAFG--------------------------APGYVRLSYAT--SLEDLEEGLE 383 (393)
T ss_pred ccccccCCHHHHHHHHHHhCCEEEccccccC--------------------------CCCEEEEEecC--CHHHHHHHHH
Confidence 100 00123454 456678899999885441 01289999874 7999999999
Q ss_pred HHHHhhhh
Q 037063 561 FVSRFLDA 568 (588)
Q Consensus 561 ~l~~~l~~ 568 (588)
.|.++++.
T Consensus 384 ~l~~~~~~ 391 (393)
T PRK05764 384 RIERFLES 391 (393)
T ss_pred HHHHHHHh
Confidence 99988763
No 105
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=5.4e-20 Score=194.49 Aligned_cols=167 Identities=10% Similarity=0.014 Sum_probs=131.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
..-.+.+.++|+++-|.. ..++++|+++|++.++.++ +++||+|++ ...|.. ....+.+.+++.|+++.+++.
T Consensus 61 nPt~~~le~~la~LEg~~----~a~~~~SGmaAi~~~~~~l-l~~GD~Vv~~~~~Yg~-t~~l~~~~l~~~Gi~v~~vd~ 134 (395)
T PRK08114 61 TLTHFSLQEAMCELEGGA----GCALYPCGAAAVANAILAF-VEQGDHVLMTGTAYEP-TQDFCSKILSKLGVTTTWFDP 134 (395)
T ss_pred ChhHHHHHHHHHHHhCCC----eEEEEhHHHHHHHHHHHHH-cCCCCEEEEeCCCcHH-HHHHHHHHHHhcCcEEEEECC
Confidence 344568889999998873 2667777999999999999 999999765 455554 444445667889999999875
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcC--cEEEEeCCCcCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKG--WHVLLDATALGSKDMDTLGLS 333 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g--~~vvvDaa~~~~~d~~~l~l~ 333 (588)
.+.++++++|+ ++|+||.+.+++|++|.+.|+++| ++||++| +.++||+++..|...+++
T Consensus 135 ------~d~~~l~~~l~--------~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl--- 197 (395)
T PRK08114 135 ------LIGADIAKLIQ--------PNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKAL--- 197 (395)
T ss_pred ------CCHHHHHHhcC--------CCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccccCHH---
Confidence 26688999998 789999999999999999999999 9999984 999999999998433333
Q ss_pred CCCCcEEEeccCccCCCCC--CceEEEEEeCcchhcc
Q 037063 334 LFKPDFLICSFYKIFGENP--SGFGCLFVKKSSASVL 368 (588)
Q Consensus 334 ~~~~D~vv~S~~K~~G~~P--~G~G~L~v~~~~~~~l 368 (588)
.+++|+++.|.||+++. + .+.|+++.+++.++.+
T Consensus 198 ~~GaDivv~S~tKyl~G-hsdv~~G~v~~~~~~~~~l 233 (395)
T PRK08114 198 DFGIDISIQAGTKYLVG-HSDAMIGTAVANARCWEQL 233 (395)
T ss_pred HcCCcEEEEcCcccccC-CCcceeEEEEcCHHHHHHH
Confidence 34599999999996652 4 3678777776654444
No 106
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=1.3e-19 Score=193.49 Aligned_cols=307 Identities=15% Similarity=0.108 Sum_probs=194.7
Q ss_pred CchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEE
Q 037063 175 SEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSS 253 (588)
Q Consensus 175 ~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~ 253 (588)
+......+++++++++++|++ + .++++++++|+.+++.++ +++||+|++ ...|.+ ....+...++..|+++.+
T Consensus 60 r~~~p~~~~le~~lA~l~g~~---~-~i~~ssG~~Ai~~~l~al-l~~GD~Vi~~~~~y~~-~~~~~~~~~~~~Gi~v~~ 133 (398)
T PRK08249 60 RNTNPTVQAFEEKVRILEGAE---A-ATAFSTGMAAISNTLYTF-LKPGDRVVSIKDTYGG-TNKIFTEFLPRMGVDVTL 133 (398)
T ss_pred CCCChHHHHHHHHHHHHhCCC---e-EEEeCChHHHHHHHHHHh-cCCCCEEEEcCCchHH-HHHHHHHHHhhCCeEEEE
Confidence 334567789999999999974 2 566666688999999888 899999765 445544 333334556778999887
Q ss_pred EeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCC
Q 037063 254 AEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGL 332 (588)
Q Consensus 254 v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l 332 (588)
++. .|+++++++|+ ++|++|++.+++|+||.+.|+++| ++|+++|+++++|+++..+....++.
T Consensus 134 vd~------~d~e~l~~~i~--------~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~- 198 (398)
T PRK08249 134 CET------GDHEQIEAEIA--------KGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQNPLA- 198 (398)
T ss_pred cCC------CCHHHHHHhcC--------CCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCCchh-
Confidence 753 47899999997 789999999999999999999999 99999999999999987764333332
Q ss_pred CCCCCcEEEeccCccCCCCCCc---eEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccc
Q 037063 333 SLFKPDFLICSFYKIFGENPSG---FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISG 409 (588)
Q Consensus 333 ~~~~~D~vv~S~~K~~G~~P~G---~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~ 409 (588)
..+|+++.|++|++| +.| .|+++.++++++++...... ..++.+...
T Consensus 199 --~~~Divv~S~sK~l~--g~~~~~gG~vv~~~~l~~~l~~~~~~--------------------------~g~~~s~~~ 248 (398)
T PRK08249 199 --LGADLVIHSATKFLS--GHADALGGVVCGSKELMEQVYHYREI--------------------------NGATMDPMS 248 (398)
T ss_pred --hCCCEEeccCceecC--CCCCceEEEEECCHHHHHHHHHHHHh--------------------------cCCCCCHHH
Confidence 348999999999887 323 36666666666555422110 000111111
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCC------------CCcccEE
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVM------------FDRGPSL 476 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~------------~~rg~iv 476 (588)
. +.+..+++.+ +...++..+.+.++.+.|.+. |.| +|+-|.-. ..-|+++
T Consensus 249 a---~l~l~~l~tL-----~~R~~~~~~na~~la~~L~~~---------p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~ 311 (398)
T PRK08249 249 A---YLILRGMKTL-----KLRVRQQQESAMALAKYLQTH---------PKVEAVYYPGLETHPNHEIAKAQMRGFGGIL 311 (398)
T ss_pred H---HHHHhCcchH-----HHHHHHHHHHHHHHHHHHHcC---------CCeeEEECCCCCCCccHHHHHhhCCCCCceE
Confidence 0 1122333333 333455566677777777763 333 35555211 1247899
Q ss_pred EEEeecCCCCCcCHHHHHHHHHhCCcE---eccccc----cCcccccchHHHHHHHHhhhcCCCCCcCCc--cEEEEecC
Q 037063 477 AFNVFDWNGTRIDPALVQKLADRHNIS---LSCGFL----QNIFFSGEYEQERVRVLETRSGTNETRSGV--SVVTAALG 547 (588)
Q Consensus 477 ~f~~~~~~g~~i~~~~v~~~l~~~gI~---v~~G~~----c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg 547 (588)
+|.+.+ +.+.+.+++++-.+. ++-|.. |++.....+. . ...-.. ..|+ +.||+|+|
T Consensus 312 sf~~~~------~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~-~-~~~~~~-------~~gi~~~liR~svG 376 (398)
T PRK08249 312 SFVLKG------GMDTVKRLLPKLRYAHRAANLGAVETIYGPARTTSHVE-N-TLEERA-------ALGIPEGLVRISVG 376 (398)
T ss_pred EEEEcC------CHHHHHHHHHhCCcceEccCCCCCCceeeCCccccccc-C-CHHHHH-------hcCCCCCeEEEEec
Confidence 999864 134456666665543 232321 1111110000 0 000011 1343 38999999
Q ss_pred CCCCHHHHHHHHHHHHHhhhh
Q 037063 548 CLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 548 ~~~t~eDv~~li~~l~~~l~~ 568 (588)
. ||++.|++-|.+.|+.
T Consensus 377 l----E~~~dl~~dl~~al~~ 393 (398)
T PRK08249 377 I----EDTEDLIADLEQAFAH 393 (398)
T ss_pred c----CCHHHHHHHHHHHHHH
Confidence 7 8888888888887765
No 107
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.86 E-value=2.7e-19 Score=190.37 Aligned_cols=331 Identities=9% Similarity=0.003 Sum_probs=211.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....++++++++++|++ . +++|+|+|+|+.+++.++.+++||+|++ ...|.+ .. ..+...|++++.++++
T Consensus 33 ~~~~~le~~la~~~g~~--~--~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~-~~----~~~~~~G~~~v~vd~~ 103 (379)
T PRK11658 33 PKNQALEQAFCQLTGNQ--H--AIAVSSATAGMHITLMALGIGPGDEVITPSLTWVS-TL----NMIVLLGATPVMVDVD 103 (379)
T ss_pred HhHHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHH-HH----HHHHHcCCEEEEEecC
Confidence 44679999999999994 2 7889999999999999987899999765 445554 22 3345679999999998
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFK 336 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~ 336 (588)
..++.+|+++++++++ ++|++|+..| ++|...|+++| ++|+++|++|++|+++..+.......+..+.
T Consensus 104 ~~~~~~d~~~l~~~i~--------~~tkav~~~~---~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g 172 (379)
T PRK11658 104 RDTLMVTPEAIEAAIT--------PRTKAIIPVH---YAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARG 172 (379)
T ss_pred CCcCCcCHHHHHHhcc--------cCCeEEEEeC---CCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCC
Confidence 5556789999999998 6789887554 59999999999 9999999999999999876212211123334
Q ss_pred CcEEEeccCccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccc-cccccCCC-CCccchhhH
Q 037063 337 PDFLICSFYKIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDE-SSQSKFPE-SSISGVSSK 413 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~-~~f~e~GT-~~~~~~~~~ 413 (588)
.|++.++.+|.+.. +. .|+++.+ +++.++++.....| ...+... .......+. ..+ +.|+ ..+.
T Consensus 173 ~~~~Sf~~~K~l~~-g~-GG~v~~~~~~~~~~~~~~~~~G-~~~~~~~----~~~~~~~~~~~~~-~~G~n~~~~----- 239 (379)
T PRK11658 173 TAIFSFHAIKNITC-AE-GGLVVTDDDELADRLRSLKFHG-LGVDAFD----RQTQGRAPQAEVL-TPGYKYNLA----- 239 (379)
T ss_pred CEEEeCCCCCcCcc-cC-ceEEEECCHHHHHHHHHHHHcC-CCcchhh----hhcccCCCcceee-ccccccCcC-----
Confidence 66666666785542 32 3555544 46666666533221 1111000 000000000 012 3454 2232
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc-cEEEEEeecCCCCCcCHHH
Q 037063 414 LVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG-PSLAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 414 ~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg-~iv~f~~~~~~g~~i~~~~ 492 (588)
.+.+|+...+..+++.+.++.+++++++.+.|+++ +...+..|....... .++.+.+.... ..++.+.
T Consensus 240 -~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~ 308 (379)
T PRK11658 240 -DINAAIALVQLAKLEALNARRREIAARYLQALADL---------PFQPLSLPAWPHQHAWHLFIIRVDEER-CGISRDA 308 (379)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---------CCccCcCCCCCCceeEEEEEEEECCcc-ccCCHHH
Confidence 34466665555568999999999999999999875 333333332211122 34555553210 1156788
Q ss_pred HHHHHHhCCcEeccccccCcccccc-hHH-------HHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 493 VQKLADRHNISLSCGFLQNIFFSGE-YEQ-------ERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 493 v~~~l~~~gI~v~~G~~c~~~~~~~-~~~-------~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
+.+.|.++||.++.. |.+-.... +.. .....+. ...|.+.+|...+.|||+++++.|++
T Consensus 309 ~~~~L~~~gI~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~-----------~~~l~lP~~~~l~~~~~~~i~~~i~~ 375 (379)
T PRK11658 309 LMEALKERGIGTGLH--FRAAHTQKYYRERFPTLSLPNTEWNS-----------ERICSLPLFPDMTDADVDRVITALQQ 375 (379)
T ss_pred HHHHHHHCCCCCccc--CcCcccChhhhccCCCCCChHHHHHH-----------hCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 888899999986643 32211110 000 0011111 12788889999999999999999998
Q ss_pred hh
Q 037063 565 FL 566 (588)
Q Consensus 565 ~l 566 (588)
++
T Consensus 376 ~~ 377 (379)
T PRK11658 376 IA 377 (379)
T ss_pred HH
Confidence 75
No 108
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.86 E-value=2.8e-20 Score=198.23 Aligned_cols=306 Identities=13% Similarity=0.060 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCC
Q 037063 180 LESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWP 259 (588)
Q Consensus 180 ~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~ 259 (588)
..+++++.+++++|.+ + .++++|++.|+.+++.++ +++||+|++....+......+...++..|+++.+++.
T Consensus 62 t~~~Le~~lA~l~G~~--~--al~~~sG~~Ai~~~l~al-~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~--- 133 (386)
T PRK06767 62 TVKLFEERMAVLEGGE--E--ALAFGSGMAAISATLIGF-LKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM--- 133 (386)
T ss_pred chHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC---
Confidence 3578999999999973 2 566667778999999888 8999997765443332444444556667887777654
Q ss_pred CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCc
Q 037063 260 NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPD 338 (588)
Q Consensus 260 ~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D 338 (588)
.++++++++++ ++|++|++.+++|+||...|+++| ++|+++|++|++|+++..+....++. .++|
T Consensus 134 ---~d~~~l~~~i~--------~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl~---~g~D 199 (386)
T PRK06767 134 ---ETEADIENKIR--------PNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLE---LGCD 199 (386)
T ss_pred ---CCHHHHHHhhC--------cCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCchh---cCCc
Confidence 26788998887 689999999999999999999999 99999999999999987653222322 3489
Q ss_pred EEEeccCccCCCCCCc--eEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC-CccchhhHHH
Q 037063 339 FLICSFYKIFGENPSG--FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES-SISGVSSKLV 415 (588)
Q Consensus 339 ~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~-~~~~~~~~~a 415 (588)
+++.|++|++|. +.+ .|+++.+++.++.+........| +.. ++.+ +.
T Consensus 200 iv~~S~sK~l~g-~g~~~gG~v~~~~~~i~~~~~~~~~~~g-------------------------~~~~~~~a----~l 249 (386)
T PRK06767 200 AVVHSATKYIGG-HGDVVAGVTICKTRALAEKIRPMRKDIG-------------------------GIMAPFDA----WL 249 (386)
T ss_pred EEEecCcceecC-CCCceeEEEEeChHHHHHHHHHHHHHhC-------------------------CCCCHHHH----HH
Confidence 999999998872 322 58899888876554221100000 001 1101 11
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEE-EeCCCC------CCCcccEEEEEeecCCCCCc
Q 037063 416 ECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVR-IYGPKV------MFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 416 l~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~-i~~p~~------~~~rg~iv~f~~~~~~g~~i 488 (588)
+..+|+. +....++.++++.++.+.|.+. |.|+ ++-|.. ....|++++|.+.+. ..
T Consensus 250 ~~~~L~t-----l~~r~~~~~~~a~~la~~L~~~---------p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~---~~ 312 (386)
T PRK06767 250 LLRGLKT-----LAVRMDRHCDNAEKIVSFLKNH---------DAVEGVWYPEGELASRQMKRGGGVISFSIKGG---KE 312 (386)
T ss_pred HHcCCCc-----HHHHHHHHHHHHHHHHHHHHcC---------CCccEEECCCcHHHHHhCCCCCceEEEEEcCC---HH
Confidence 1223322 2445566677788888888874 4554 443421 112478999998631 12
Q ss_pred CHHHHHHHHHhCCcEeccccccC----cccccchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCCCCCHHHHHHHHHHH
Q 037063 489 DPALVQKLADRHNISLSCGFLQN----IFFSGEYEQERVRVLETRSGTNETRSGV--SVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 489 ~~~~v~~~l~~~gI~v~~G~~c~----~~~~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~~t~eDv~~li~~l 562 (588)
+...+.+.|+..+|.++-|..-+ |....... . ...-.. ..|+ +.||+|+|. ||++.|++-|
T Consensus 313 ~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~-~-~~~~~~-------~~gi~~~l~R~svGl----E~~~dl~~dl 379 (386)
T PRK06767 313 ETQAFINDLHFITIAVSLGDTETLIQHPATMTHAA-I-PAELRQ-------EMGIYDNLIRLSVGL----ESWEDIVSDL 379 (386)
T ss_pred HHHHHHHhCCccEEecCCCCcCccccCCCcccccc-C-CHHHHH-------hcCCCCCeEEEEecc----CCHHHHHHHH
Confidence 34455666666677777664322 21100000 0 000011 1333 389999997 8888888888
Q ss_pred HHhhh
Q 037063 563 SRFLD 567 (588)
Q Consensus 563 ~~~l~ 567 (588)
.+.|+
T Consensus 380 ~~al~ 384 (386)
T PRK06767 380 EQALK 384 (386)
T ss_pred HHHHh
Confidence 87765
No 109
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=4.5e-20 Score=195.64 Aligned_cols=164 Identities=14% Similarity=0.056 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWP 259 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~ 259 (588)
...+|++|+++.+.. .+++++|+++|+.+++.++ +++||+|+ +...|.. ....+....++.|+++.+++.+
T Consensus 63 ~~~Le~~iA~le~~~----~~~~~~sG~~Ai~~~l~al-l~~GD~Vvv~~~~Y~~-t~~l~~~~l~~~Gi~v~~v~~~-- 134 (394)
T PRK09028 63 HFAFQAAIVELEGGA----GTALYPSGAAAISNALLSF-LKAGDHLLMVDSCYEP-TRDLCDKILKGFGIETTYYDPM-- 134 (394)
T ss_pred HHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEECCCcHH-HHHHHHHhhhhcceEEEEECCC--
Confidence 458999999998763 3899999999999999999 99999966 4555644 3333334556789999887643
Q ss_pred CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCc
Q 037063 260 NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPD 338 (588)
Q Consensus 260 ~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D 338 (588)
+.++++++++ ++|++|++++++|+||.+.|+++| ++||++|+++++|+++..|....+++ +++|
T Consensus 135 ----~~e~l~~~l~--------~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~---~GaD 199 (394)
T PRK09028 135 ----IGEGIRELIR--------PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPFE---MGVD 199 (394)
T ss_pred ----CHHHHHHhcC--------cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccCCccc---cCce
Confidence 4577888887 789999999999999999999999 99999999999999998885455554 3499
Q ss_pred EEEeccCccCCCCCCc--eEEEEEeCcchhcc
Q 037063 339 FLICSFYKIFGENPSG--FGCLFVKKSSASVL 368 (588)
Q Consensus 339 ~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l 368 (588)
+++.|.||+++. +.+ .|+++.+++.++.+
T Consensus 200 ivv~S~tK~l~G-h~d~~~G~~~~~~~~~~~l 230 (394)
T PRK09028 200 ISIQAATKYIVG-HSDVMLGTATANEKHWDQL 230 (394)
T ss_pred EEEEeCCeEecC-CCCEEEEEEECCHHHHHHH
Confidence 999999998762 322 56555555544444
No 110
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.86 E-value=6.2e-20 Score=194.35 Aligned_cols=168 Identities=11% Similarity=0.038 Sum_probs=132.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
......++++|+++.|++ + +++++|+++|+.+++.++ +++||+|+ +...|++ ....+...++..|+++..++.
T Consensus 49 nPt~~~lE~~lA~l~g~~--~--~~~~~sG~~Ai~~al~al-l~~GD~Vl~~~~~y~~-t~~~~~~~~~~~gi~v~~~d~ 122 (377)
T TIGR01324 49 TLTHFALQDAMCELEGGA--G--CYLYPSGLAAVTNSILAF-VKAGDHVLMVDSAYEP-TRYFCDIVLKRMGVDITYYDP 122 (377)
T ss_pred CccHHHHHHHHHHHhCCC--c--EEEECcHHHHHHHHHHHh-cCCCCEEEEcCCCcHH-HHHHHHHHHHhcCcEEEEECC
Confidence 344568999999999973 3 889999999999999999 99999976 4555654 333333455678999888764
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
. +.++++++++ ++|++|++.+++|++|.+.|+++| ++|+++|+++++|+++..|....++. +
T Consensus 123 ~------~~e~l~~~i~--------~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~pl~---~ 185 (377)
T TIGR01324 123 L------IGEDIATLIQ--------PNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFKPLE---H 185 (377)
T ss_pred C------CHHHHHHhcC--------CCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCccc---c
Confidence 3 2277888887 789999999999999999999999 99999999999999998884333332 4
Q ss_pred CCcEEEeccCccCCCCCCc--eEEEEEeCcchhccc
Q 037063 336 KPDFLICSFYKIFGENPSG--FGCLFVKKSSASVLS 369 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l~ 369 (588)
++|+++.|++|++|. +.+ .|+++.+++.++++.
T Consensus 186 gaDivv~S~tK~l~G-~~d~~gG~v~~~~~~~~~l~ 220 (377)
T TIGR01324 186 GVDISIQAGTKYLVG-HSDIMIGTVVANARTWDQLR 220 (377)
T ss_pred CceEEEecCceeccC-CCCceEEEEEeCHHHHHHHH
Confidence 599999999998873 433 677888777665554
No 111
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.86 E-value=1.7e-19 Score=190.55 Aligned_cols=288 Identities=9% Similarity=0.037 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
..++|+.|++++++++++ |++|+|+++++.+++.++ .+|+.++....|. .....++..|++++.++++..+
T Consensus 57 ~~~lr~~ia~~~~~~~~~--i~it~Ga~~~l~~~~~~l--~~g~viv~~P~y~-----~~~~~~~~~g~~~~~v~~~~~~ 127 (356)
T PRK08056 57 YRHLHQALARHHQVPASW--ILAGNGETESIFAVVSGL--KPRRAMIVTPGFA-----EYRRALQQVGCEIRRYSLREAD 127 (356)
T ss_pred HHHHHHHHHHHhCcChhh--EEECCCHHHHHHHHHHHh--CCCCEEEeCCCcH-----HHHHHHHHcCCeEEEEeccccc
Confidence 469999999999998775 999999999999999876 5676555433332 1245667889999999986333
Q ss_pred C-ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCC--cCCCC--CCCCC
Q 037063 261 L-RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATA--LGSKD--MDTLG 331 (588)
Q Consensus 261 ~-~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~--~~~~d--~~~l~ 331 (588)
+ .++ +++++.+. +++++|++++++||||..++ +++| ++|+++|+++|+|.+- +..-. ..++
T Consensus 128 ~~~~~-~~~~~~~~--------~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~- 197 (356)
T PRK08056 128 GWQLT-DAILEALT--------PDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ- 197 (356)
T ss_pred CCCcc-HHHHHhcc--------CCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH-
Confidence 2 334 45555555 68899999999999999999 5567 8899999999999982 22100 0011
Q ss_pred CCCCCCcEEEeccCccCCCCCCceEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 332 LSLFKPDFLICSFYKIFGENPSGFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 332 l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
+...+.++++.|++|+||.+..++|+++..+ +.++.+...... + +.+..+.
T Consensus 198 ~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~~--~--------------------------~~~~~~~ 249 (356)
T PRK08056 198 LADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMP--W--------------------------SINAFAA 249 (356)
T ss_pred hccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCC--C--------------------------chhHHHH
Confidence 2223367899999999995456799998853 454544422111 0 0111110
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCH
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDP 490 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~ 490 (588)
.+...+++. ... ...+.++.++.++++.+.|+++ +++.++.+ .+..+-+.+.. +.
T Consensus 250 ---~~a~~~l~~-~~~-~~~~~~~~~~~r~~l~~~L~~~---------~~~~~~~~-----~~~~~~~~~~~------~~ 304 (356)
T PRK08056 250 ---LAGEVILQD-RAY-QQATWQWLAEEGARFYQALCAL---------PLLTVWPG-----RANYLFLRCER------PD 304 (356)
T ss_pred ---HHHHHHhCC-HHH-HHHHHHHHHHHHHHHHHHHhcC---------CCcEEcCC-----CCcEEEEEcCC------Ch
Confidence 122223321 111 3455666677778888888764 45555432 34444444432 23
Q ss_pred HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 491 ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 491 ~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
..+.+.|.++||.++.|..... .+.++||||++ +.++.++|+++|+++++
T Consensus 305 ~~~~~~l~~~gI~v~~~~~f~~------------------------~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 305 IDLQRALLTQRILIRSCANYPG------------------------LDSRYYRVAIR---SAAENERLLAALRNVLT 354 (356)
T ss_pred HHHHHHHHHCCeEEEECCCCCC------------------------CCCCEEEEEEc---CHHHHHHHHHHHHHHHc
Confidence 4566666679999998743210 11238999987 78999999999998754
No 112
>PRK06460 hypothetical protein; Provisional
Probab=99.86 E-value=1.2e-19 Score=192.56 Aligned_cols=310 Identities=15% Similarity=0.162 Sum_probs=194.4
Q ss_pred cCCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCC-CchhHHHHHHHHHHhcCCEE
Q 037063 173 YGSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYD-HENEAAALMIESSKKRGARV 251 (588)
Q Consensus 173 ~g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e-~~s~~~~~~~~~a~~~G~~v 251 (588)
|+.......+++++++++++|++ +.++|++| ++|+.+++.++ +++||+|++... +.. .+..+...++..|+++
T Consensus 39 y~r~~~p~~~~L~~~lA~l~g~~---~~v~~~sG-~~ai~~~l~al-~~~Gd~Vl~~~~~~~~-ty~~~~~~~~~~G~~v 112 (376)
T PRK06460 39 YSREANPTVLELTKKIVELENAE---MGVAFSSG-MGAISTTALAL-LKPGNSVLVHRDMFGR-SYRFFTDYLKNWGVNV 112 (376)
T ss_pred eeCCCCccHHHHHHHHHHHhCCC---cEEEeCCH-HHHHHHHHHHH-hCCCCEEEEecCCcCc-HHHHHHHHHHhhCcEE
Confidence 44444667789999999999995 34777555 68999999998 899999776433 333 2333356678889999
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCC
Q 037063 252 SSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTL 330 (588)
Q Consensus 252 ~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l 330 (588)
..++.+ +.+.+++.++ +++++|++++++||||.+.|+++| ++|+++|++|++|+++..+....++
T Consensus 113 ~~~~~~------~~~~l~~~~~--------~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l 178 (376)
T PRK06460 113 DASNPG------SDNIIEKAKS--------KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQKPL 178 (376)
T ss_pred EEECCC------CHHHHHHhcC--------CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccCChh
Confidence 888754 1233444334 689999999999999999999999 9999999999999998776433333
Q ss_pred CCCCCCCcEEEeccCccCCCCCC--ceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc
Q 037063 331 GLSLFKPDFLICSFYKIFGENPS--GFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS 408 (588)
Q Consensus 331 ~l~~~~~D~vv~S~~K~~G~~P~--G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~ 408 (588)
. ..+|+++.|++|++|. +. ..|+++.++++++.+....... |. +..+..
T Consensus 179 ~---~~~divv~S~sK~l~G-~~~~~~G~~~~~~~l~~~l~~~~~~~-g~------------------------~~~~~~ 229 (376)
T PRK06460 179 E---LGADIVVHSASKFLAG-HNDVIAGLAAGYGKLLNVIDQMRRTL-GT------------------------SLDPHA 229 (376)
T ss_pred h---cCCCEEEeecceeccC-CCCceEEEEecCHHHHHHHHHHHHhc-CC------------------------CCCHHH
Confidence 2 2489999999998871 32 2788888877766554221100 00 000001
Q ss_pred chhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCC------------CCCcccE
Q 037063 409 GVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKV------------MFDRGPS 475 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~------------~~~rg~i 475 (588)
+ ..+..+++.+ +...+++.+.++++.+.|++. |.| +|+-|.- ....|++
T Consensus 230 a----~~~l~~~~~l-----~~r~~~~~~n~~~l~~~L~~~---------p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~ 291 (376)
T PRK06460 230 A----YLTLRGIKTL-----KIRMDVINRNAEQIAEFLEGH---------PKVVKVYYPGLKSHVDYEIARRVLKGFGGV 291 (376)
T ss_pred H----HHHHhchhhH-----HHHHHHHHHHHHHHHHHHHcC---------CCccEEECCCCCCCccHHHHHhhCCCCceE
Confidence 1 1111334333 445556667777777777763 222 4554421 1134789
Q ss_pred EEEEeecCCCCCcCHHHHHHHHHhCCcEe---cccc----ccCcccccchHHHHHHHHhhhcCCCCCcCCc--cEEEEec
Q 037063 476 LAFNVFDWNGTRIDPALVQKLADRHNISL---SCGF----LQNIFFSGEYEQERVRVLETRSGTNETRSGV--SVVTAAL 546 (588)
Q Consensus 476 v~f~~~~~~g~~i~~~~v~~~l~~~gI~v---~~G~----~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSl 546 (588)
++|.+.+ +.+.+.++++.-.+.. +-|. .++|.... ........ .. ..|+ +.||+|+
T Consensus 292 ~s~~~~~------~~~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~~~~-~~~~~~~~-~~-------~~gi~~~liR~sv 356 (376)
T PRK06460 292 LSFEVNG------GQESALKVMKSLKLIIPAQTLGGVNSVISHPATMS-HRTLSLEE-RK-------IVGITDSLLRLSV 356 (376)
T ss_pred EEEEEcC------cHHHHHHHHHhCCcceeccCCCCCceEEeCccccc-cccCCHHH-HH-------hcCCCCCeEEEEe
Confidence 9999864 1445667777654422 2221 11111000 00000000 01 1333 3899999
Q ss_pred CCCCCHHHHHHHHHHHHHhhhh
Q 037063 547 GCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 547 g~~~t~eDv~~li~~l~~~l~~ 568 (588)
|. ||++.|++-|.+.|+.
T Consensus 357 Gl----E~~~dl~~dl~~al~~ 374 (376)
T PRK06460 357 GI----EDVNDLIEDLDRALST 374 (376)
T ss_pred cc----CCHHHHHHHHHHHHHh
Confidence 97 8899999988888765
No 113
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.86 E-value=4.6e-19 Score=190.53 Aligned_cols=298 Identities=14% Similarity=0.052 Sum_probs=193.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.+..+++++++++++|.+ ..++|++|+ +|+..++..+. ..+|+.|+++..+|...... ++..|++++.++.
T Consensus 89 ~~~~~~le~~la~~~g~~---~~~~~~SG~-~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~----~~~~g~~~~~~~~ 160 (406)
T PRK13393 89 NHYHVLLEAELADLHGKE---AALLFTSGY-VSNWAALSTLGSRLPGCVILSDELNHASMIEG----IRHSRAEKRIFRH 160 (406)
T ss_pred hHHHHHHHHHHHHHhCCC---cEEEeCCcH-HHHHHHHHHhhcCCCCCEEEEccchhHHHHHH----HHHcCCeEEEeCC
Confidence 346789999999999973 346666655 57676666552 22677777654444323333 2446888777654
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC-C------CC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK-D------MD 328 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~-d------~~ 328 (588)
.|.+++++.+.. ...+++++|++++++|++|.+.|+++| ++|+++|+++++|++|..+. . ..
T Consensus 161 ------~d~~~l~~~l~~----~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~ 230 (406)
T PRK13393 161 ------NDPADLERKLSD----LDPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAE 230 (406)
T ss_pred ------CCHHHHHHHHHh----ccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhh
Confidence 267788877751 112468999999999999999999999 99999999999999987542 0 01
Q ss_pred CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc
Q 037063 329 TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS 408 (588)
Q Consensus 329 ~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~ 408 (588)
..++. .++|+++.++.|.+|. .| |+++.++++++.+.....+ . .| .++.+..
T Consensus 231 ~~~~~-~~~~i~~~tlsKa~g~--~G-G~~~~~~~~~~~l~~~~~~---~-------------------~~--t~~~~p~ 282 (406)
T PRK13393 231 REGLA-DRLTIIEGTLAKAFGV--MG-GYITGSAALCDFIRSFASG---F-------------------IF--TTSLPPA 282 (406)
T ss_pred hcCCC-CCCeEEEEeCchhhcc--cC-ceeeCCHHHHHHHHHhCcC---c-------------------ee--cCccCHH
Confidence 11221 2368888999999993 35 7777777766655432111 0 01 1122222
Q ss_pred chhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCc
Q 037063 409 GVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i 488 (588)
.. +++.++|+++.+.+ ....+...+.+++++.|.++ |. .++. ..++++.+.+.+. .
T Consensus 283 ~~---aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~-------g~---~~~~-----~~~~i~~v~~~~~----~ 338 (406)
T PRK13393 283 VA---AGALASVRHLKASS--AERERHQDRVARLRARLDKA-------GI---PHLP-----NPSHIVPVMVGDP----V 338 (406)
T ss_pred HH---HHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHc-------CC---CcCC-----CCCCeEEEEeCCH----H
Confidence 22 45568888876643 22456678888999999875 22 2221 3467777755331 1
Q ss_pred CHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 489 DPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 489 ~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
....+.+.| +++||.++.+..- .. ..|...||+|++.++|.|||+++++.|+++++
T Consensus 339 ~~~~l~~~L~~~~Gi~v~~~~~p--~~---------------------p~g~~~iRis~~~~~t~edid~l~~~l~~~~~ 395 (406)
T PRK13393 339 LCKQISDELLDRYGIYVQPINYP--TV---------------------PRGTERLRITPSPLHTDADIEHLVQALSEIWA 395 (406)
T ss_pred HHHHHHHHHHHhCCEEEEeECCC--CC---------------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 234555555 4579999864210 00 02334899999999999999999999999876
Q ss_pred h
Q 037063 568 A 568 (588)
Q Consensus 568 ~ 568 (588)
+
T Consensus 396 ~ 396 (406)
T PRK13393 396 R 396 (406)
T ss_pred h
Confidence 5
No 114
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.86 E-value=1.3e-19 Score=191.66 Aligned_cols=298 Identities=12% Similarity=0.019 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccC
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAW 258 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~ 258 (588)
....+++++|+++. . ++ .++++|+++|+.+++.++ +++||+|++..+.+..........+++.|++++.++.+
T Consensus 51 p~~~~Le~~lA~l~--~-~~--~v~~~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~- 123 (366)
T PRK07582 51 PTWRALEAALGELE--G-AE--ALVFPSGMAAITAVLRAL-LRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTA- 123 (366)
T ss_pred ccHHHHHHHHHHHc--C-CC--EEEECCHHHHHHHHHHHh-cCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCC-
Confidence 34568999999998 2 22 677777788999999998 89999977644333324443334556789999999875
Q ss_pred CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCC
Q 037063 259 PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKP 337 (588)
Q Consensus 259 ~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~ 337 (588)
+. .. .+. +++++|++..++|++|.+.|+++| ++|+++|++++||+++..+....+++ +.+
T Consensus 124 ~~-------~~-~~~--------~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~---~g~ 184 (366)
T PRK07582 124 GM-------AE-AAL--------AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQRPLE---LGA 184 (366)
T ss_pred Ch-------HH-Hhc--------cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccccCchh---cCC
Confidence 21 11 233 578999999999999999999999 99999999999999975442233443 348
Q ss_pred cEEEeccCccCCCCCCc--eEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHH
Q 037063 338 DFLICSFYKIFGENPSG--FGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKL 414 (588)
Q Consensus 338 D~vv~S~~K~~G~~P~G--~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~ 414 (588)
|+++.|++|+++. +.| +|+++.+ +++++++...... ..++++.... .
T Consensus 185 Divv~S~sK~l~G-~~g~~~G~v~~~~~~l~~~l~~~~~~--------------------------~g~~~~~~~a---~ 234 (366)
T PRK07582 185 DLVVASDTKALTG-HSDLLLGYVAGRDPELMAAVERWRLL--------------------------AGAIPGPFEA---W 234 (366)
T ss_pred cEEEecccccccC-CCCeeEEEEEcCcHHHHHHHHHHHHH--------------------------hCCCCCHHHH---H
Confidence 9999999997752 556 5888875 4554444322100 0011111110 1
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCC---C---------CCcccEEEEEee
Q 037063 415 VECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKV---M---------FDRGPSLAFNVF 481 (588)
Q Consensus 415 al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~---~---------~~rg~iv~f~~~ 481 (588)
.+..+|+.+ +...++..+.+..+.+.|.+. |.| +++-|.- + ...|++++|.+.
T Consensus 235 l~~r~l~tl-----~~R~~~~~~na~~la~~L~~~---------p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~ 300 (366)
T PRK07582 235 LAHRSLGTL-----GLRFARQCANALAVAELLAGH---------PAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA 300 (366)
T ss_pred HHHhccccH-----HHHHHHHHHHHHHHHHHHHhC---------CCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC
Confidence 222344432 333445555666666666653 333 3443321 1 125889999985
Q ss_pred cCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHH
Q 037063 482 DWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAF 561 (588)
Q Consensus 482 ~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~ 561 (588)
+ .+.+.+++++.+|....- +.|........ ...... ....+.||+|+|+.+.++.|+.|.++
T Consensus 301 ~-------~~~~~~~~~~l~~~~~~~---s~G~~~sl~~~-~~~~~~-------~~~~~liR~svGlE~~~dli~dl~~a 362 (366)
T PRK07582 301 D-------AAAAERFVAASRLVVAAT---SFGGVHTSADR-RARWGD-------AVPEGFVRLSCGIEDTDDLVADLERA 362 (366)
T ss_pred C-------HHHHHHHHHhCCcceecc---cCCCccchhhh-HHHcCC-------CCCCCeEEEEeccCCHHHHHHHHHHH
Confidence 3 677888898888754321 11111111100 000000 01123899999997777777777777
Q ss_pred HHH
Q 037063 562 VSR 564 (588)
Q Consensus 562 l~~ 564 (588)
|++
T Consensus 363 l~~ 365 (366)
T PRK07582 363 LDA 365 (366)
T ss_pred Hhh
Confidence 653
No 115
>PRK08363 alanine aminotransferase; Validated
Probab=99.86 E-value=1.1e-19 Score=194.72 Aligned_cols=304 Identities=13% Similarity=0.112 Sum_probs=194.4
Q ss_pred HHHHHHHHHHh----C--CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEE-
Q 037063 182 SKIRKRIMDFM----N--ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSA- 254 (588)
Q Consensus 182 ~~~r~~ia~~l----g--a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v- 254 (588)
.++|+.|++++ | ++++ +|++|+|+++|+.+++.++ +++||+|++....+... ...++..|++++.+
T Consensus 73 ~~lr~~ia~~~~~~~g~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~v~~~ 145 (398)
T PRK08363 73 PELREAIVKREKRKNGVDITPD--DVRVTAAVTEALQLIFGAL-LDPGDEILIPGPSYPPY----TGLVKFYGGVPVEYR 145 (398)
T ss_pred HHHHHHHHHHHHHhcCCCCChh--hEEEeCCHHHHHHHHHHHh-CCCCCEEEEcCCCCcch----HHHHHHcCCEEEEec
Confidence 36777777776 4 4554 4999999999999999999 89999977654433212 34556789888887
Q ss_pred eccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcC-CCC--C
Q 037063 255 EFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALG-SKD--M 327 (588)
Q Consensus 255 ~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~-~~d--~ 327 (588)
+.+..+..+|.+++++.+. ++++++++++++|+||..++ +++| ++|+++|+++|+|++... ..+ .
T Consensus 146 ~~~~~~~~~d~~~l~~~~~--------~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~ 217 (398)
T PRK08363 146 TIEEEGWQPDIDDIRKKIT--------EKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKH 217 (398)
T ss_pred cccccCCcCCHHHHHhhCC--------cceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcc
Confidence 4543344688999998887 67899999999999999999 5666 889999999999998321 100 0
Q ss_pred CC-CCCCCCCCcEEEeccCccCCCCCCceEEEEE--eCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 328 DT-LGLSLFKPDFLICSFYKIFGENPSGFGCLFV--KKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 328 ~~-l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v--~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
.. ..+.....-+++.||+|.|+.++.++|++++ ++++++.+....... .. . ..+.
T Consensus 218 ~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~-~~--------------------~-~~~~ 275 (398)
T PRK08363 218 VSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKL-AR--------------------I-RLCP 275 (398)
T ss_pred cCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHHHH-hc--------------------c-cccC
Confidence 01 1111111235678999987765677999998 555544433221000 00 0 0011
Q ss_pred CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEE-EeecC
Q 037063 405 SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAF-NVFDW 483 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f-~~~~~ 483 (588)
..+.+ .++..+|....+. ++++.++++..++++.+.|.++ ++++++.| .++++.+ .+.+.
T Consensus 276 s~~~q----~~~~~~l~~~~~~-l~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~p-----~g~~~~~~~l~~~ 336 (398)
T PRK08363 276 NTPAQ----FAAIAGLTGPMDY-LEEYMKKLKERRDYIYKRLNEI---------PGISTTKP-----QGAFYIFPRIEEG 336 (398)
T ss_pred ChHHH----HHHHHHHhCChHH-HHHHHHHHHHHHHHHHHHHhcC---------CCCEecCC-----CeEEEEEEEeccC
Confidence 11111 2222334321111 4556677777788888888763 45665543 4566665 34331
Q ss_pred CCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 484 NGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 484 ~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
. ..-+.+.+.+++.++||.++.|.... . .+..+||+|++ .+.+++++.++.|+
T Consensus 337 ~-~~~~~~~~~~~l~~~gV~v~~g~~f~----------------~--------~~~~~iRis~~--~~~~~l~~~l~~l~ 389 (398)
T PRK08363 337 P-WKDDKEFVLDVLHEAHVLFVHGSGFG----------------E--------YGAGHFRLVFL--PPVEILEEAMDRFE 389 (398)
T ss_pred C-CCCHHHHHHHHHHhCCEEEeCchhhC----------------C--------CCCCeEEEEec--CCHHHHHHHHHHHH
Confidence 0 00124456788899999998874321 0 12238999986 46899999999999
Q ss_pred Hhhhh
Q 037063 564 RFLDA 568 (588)
Q Consensus 564 ~~l~~ 568 (588)
+++.+
T Consensus 390 ~~~~~ 394 (398)
T PRK08363 390 EFMRE 394 (398)
T ss_pred HHHHH
Confidence 88765
No 116
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=9.9e-20 Score=195.71 Aligned_cols=162 Identities=14% Similarity=0.152 Sum_probs=127.4
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+.+++++++++|++ +.|+|++|+ +|+.+++.++ +++||+|+ +..+|.++ ...+.+.+++.|+++++++
T Consensus 68 ~pt~~~le~~la~l~g~~---~~v~fsSG~-~Ai~~al~~l-l~~Gd~VI~~~~~y~~t-~~~~~~~l~~~Gi~v~~vd- 140 (437)
T PRK05613 68 NPTVEALENRIASLEGGV---HAVAFASGQ-AAETAAILNL-AGAGDHIVTSPRLYGGT-ETLFLVTLNRLGIEVTFVE- 140 (437)
T ss_pred ChHHHHHHHHHHHHhCCC---eEEEeCCHH-HHHHHHHHHh-cCCCCEEEECCCccHHH-HHHHHHHHHhcCeEEEEEC-
Confidence 566789999999999983 346666666 7888888888 89999966 56677764 3333456678899999997
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ + .|+++++++|+ ++|++|++.+.+|++|.+.|+++| ++|+++|++++||+++..|....++. +
T Consensus 141 ~-~---~d~e~l~~~l~--------~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~~p~~---~ 205 (437)
T PRK05613 141 N-P---DDPESWQAAVQ--------PNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALVRPLE---L 205 (437)
T ss_pred C-C---CCHHHHHHhCC--------ccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccccChHH---h
Confidence 3 2 27889999988 789999999999999999999999 99999999999999988773333332 3
Q ss_pred CCcEEEeccCccCCCCCCceEEEEEe
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFVK 361 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v~ 361 (588)
++|++++|+||++|....|+|.+++.
T Consensus 206 GaDivv~S~~K~l~G~gd~~gG~vv~ 231 (437)
T PRK05613 206 GADVVVASLTKFYTGNGSGLGGVLID 231 (437)
T ss_pred CCCEEEeeccceecCCCcceeEEEEe
Confidence 49999999999888212345776763
No 117
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.86 E-value=1.8e-19 Score=192.06 Aligned_cols=307 Identities=18% Similarity=0.096 Sum_probs=196.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccC
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAW 258 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~ 258 (588)
...++++++|++++|++ + .++++|+++|+.+++.++ +++||+|++....+......+...+...|+++.+++.+
T Consensus 59 p~~~~le~~lA~l~g~~---~-av~~~sG~~Ai~~~l~al-~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~- 132 (391)
T TIGR01328 59 PTVSNLEGRIAFLEGTE---A-AVATSSGMGAIAATLLTI-LKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMA- 132 (391)
T ss_pred chHHHHHHHHHHHhCCC---c-EEEECCHHHHHHHHHHHH-hCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCC-
Confidence 44678999999999984 2 677888889999999888 89999977654433323333456667889999998764
Q ss_pred CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCC
Q 037063 259 PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKP 337 (588)
Q Consensus 259 ~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~ 337 (588)
++++++++++ ++|++|++.+++|++|...|+++| ++|+++|+++++|+++..+....+++ ..+
T Consensus 133 -----d~e~l~~~i~--------~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~~~~---~g~ 196 (391)
T TIGR01328 133 -----IPEEVKAHIK--------DNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTNPVA---LGV 196 (391)
T ss_pred -----CHHHHHHhhc--------cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCCchh---cCC
Confidence 6788998887 789999999999999999999999 99999999999999987763223332 348
Q ss_pred cEEEeccCccCCCCCCc--eEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHH
Q 037063 338 DFLICSFYKIFGENPSG--FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLV 415 (588)
Q Consensus 338 D~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~a 415 (588)
|+++.|++|++|. +.+ .|+++.+++++++++...... ..| ..+... .+
T Consensus 197 Divv~S~sK~lgg-~g~~~gG~v~~~~~li~~l~~~~~~~-------------------------~~g-~~l~~~---~a 246 (391)
T TIGR01328 197 DVVVHSATKYIGG-HGDVVAGLICGKAELLQQIRMVGIKD-------------------------MTG-SVISPF---DA 246 (391)
T ss_pred CEEEccccccccC-CCCceEEEEEcCHHHHHHHHHHHHHh-------------------------CCC-CCCCcH---HH
Confidence 9999999999983 332 577777777766554211000 001 001111 01
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCC------------CCcccEEEEEeec
Q 037063 416 ECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVM------------FDRGPSLAFNVFD 482 (588)
Q Consensus 416 l~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~------------~~rg~iv~f~~~~ 482 (588)
..++..++. +....++..+.+..+.+.|++. |.| +++-|.-. ..-|++++|.+.+
T Consensus 247 -~l~l~~L~t--l~~r~~~~~~na~~la~~L~~~---------p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~ 314 (391)
T TIGR01328 247 -WLILRGLKT--LNIRMKRHSENAMKVAEYLKSH---------PAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKG 314 (391)
T ss_pred -HHHHhCcCc--HHHHHHHHHHHHHHHHHHHHhC---------CCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCC
Confidence 122332322 2444555666677777777763 333 33333211 1237899999863
Q ss_pred CCCCCcCHHHHHHHHHhCCcE---eccccc----cCcccccchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCCCCCHH
Q 037063 483 WNGTRIDPALVQKLADRHNIS---LSCGFL----QNIFFSGEYEQERVRVLETRSGTNETRSGV--SVVTAALGCLTNFE 553 (588)
Q Consensus 483 ~~g~~i~~~~v~~~l~~~gI~---v~~G~~----c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~~t~e 553 (588)
+.+.+.+++++-.+. .+-|.. |++.....+. ..... .. ..|+ +.||+|+|. |
T Consensus 315 ------~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~-~~~~~-~~-------~~gi~~~liR~svGl----E 375 (391)
T TIGR01328 315 ------GFAGAKKLLNNLKLIRLAVSLGDAETLIQHPASMTHAV-VPKEE-RE-------AAGITDGMIRLSVGL----E 375 (391)
T ss_pred ------CHHHHHHHHHhCCcceEecCCCCCcccCcCCCcccccc-CCHHH-HH-------hcCCCCCeEEEEeCc----C
Confidence 134556666665543 222321 2221111000 00000 00 1333 389999997 8
Q ss_pred HHHHHHHHHHHhhhh
Q 037063 554 DTYRLWAFVSRFLDA 568 (588)
Q Consensus 554 Dv~~li~~l~~~l~~ 568 (588)
|++.|++-|.+.|++
T Consensus 376 ~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 376 DADDLIADLKQALDA 390 (391)
T ss_pred CHHHHHHHHHHHHhh
Confidence 899999988887753
No 118
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.86 E-value=2.5e-20 Score=195.06 Aligned_cols=291 Identities=14% Similarity=0.085 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
...+++++.+++++| ++ .+++++|+|+|+.+++.++ +++||+|++. ..|.+ .... ...++..|++++.++.+
T Consensus 32 ~~~~~l~~~~a~~~g--~~--~~~~~~~gt~a~~~~~~~l-~~~gd~v~~~~~~~~~-~~~~-~~~~~~~g~~~~~v~~~ 104 (338)
T cd06502 32 PTTAKLEARAAELFG--KE--AALFVPSGTAANQLALAAH-TQPGGSVICHETAHIY-TDEA-GAPEFLSGVKLLPVPGE 104 (338)
T ss_pred HHHHHHHHHHHHHhC--CC--eEEEecCchHHHHHHHHHh-cCCCCeEEEecCccee-eecC-CcHHHHcCceEEeecCC
Confidence 456799999999999 33 3999999999999999998 8999997654 44433 1111 11234479999999875
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCCCcCC----CCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDATALGS----KDMDT 329 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa~~~~----~d~~~ 329 (588)
++.+|.++|++++++. .....+++++|++++++|+ |..++.+ +| ++|+++|+++++|+++..+ ... .
T Consensus 105 --~~~~d~~~l~~~i~~~-~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~-~ 179 (338)
T cd06502 105 --NGKLTPEDLEAAIRPR-DDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGV-A 179 (338)
T ss_pred --CCcCCHHHHHHHhhcc-CCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC-C
Confidence 3679999999999721 0011137899999999996 6655654 46 8899999999999975221 001 1
Q ss_pred CCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccc
Q 037063 330 LGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISG 409 (588)
Q Consensus 330 l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~ 409 (588)
+......+|+++.|+||+||. | |.++++.++++++.+.+.... ..++.+..+
T Consensus 180 ~~~~~~~~d~~~~s~sK~~~~-~-~g~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~ 231 (338)
T cd06502 180 LKTYKSGVDSVSFCLSKGGGA-P-VGAVVVGNRDFIARARRRRKQ--------------------------AGGGMRQSG 231 (338)
T ss_pred HHHHHhcCCEEEEeccccCCC-c-cceEEECCHHHHHHHHHHHHH--------------------------hCCChhhHH
Confidence 110113489999999999995 4 434556677777666533211 001111111
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcC
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRID 489 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~ 489 (588)
+ ....++..++.-+..++.++...+++++.+.|.++ | +.++. ..++++.+.+.. +
T Consensus 232 ~----~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-------~---~~~~~-----~~~~~~~v~~~~--~---- 286 (338)
T cd06502 232 F----LAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL-------G---GLESE-----VQTNIVLLDPVE--A---- 286 (338)
T ss_pred H----HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-------C---CCccc-----ccCCeEEEecCC--c----
Confidence 1 11233333433345666788888899999999885 2 22222 245677666532 1
Q ss_pred HHHHHHHHH------hCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 490 PALVQKLAD------RHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 490 ~~~v~~~l~------~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
.....++++ ++||.++.. +...||++++++++.+|++++++.++
T Consensus 287 ~~~~~~l~~~l~~~~~~gi~~~~~------------------------------~~~~lRi~~~~~~~~~~i~~~~~~l~ 336 (338)
T cd06502 287 NAVFVELSKEAIERRGEGVLFYAW------------------------------GEGGVRFVTHWDTTEEDVDELLSALK 336 (338)
T ss_pred cHHHHHHHHHHHHhhhCCEEEEec------------------------------CCCeEEEEeecCCCHHHHHHHHHHHh
Confidence 122223332 468876532 01389999999999999999999986
Q ss_pred H
Q 037063 564 R 564 (588)
Q Consensus 564 ~ 564 (588)
+
T Consensus 337 ~ 337 (338)
T cd06502 337 A 337 (338)
T ss_pred c
Confidence 4
No 119
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.86 E-value=3e-19 Score=191.99 Aligned_cols=303 Identities=10% Similarity=0.011 Sum_probs=192.3
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCC-CchhHHHHHHHHHHhcCCEE--EEEeccCCC
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYD-HENEAAALMIESSKKRGARV--SSAEFAWPN 260 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e-~~s~~~~~~~~~a~~~G~~v--~~v~~~~~~ 260 (588)
+++++++++|.+ +.++++++++.|+..++.++ +++||+|+++.. |.+....+.. . ...+..+ ..++++..+
T Consensus 79 ~~~~la~l~g~~---~alv~~~SG~~A~~~~l~al-~~~GD~Vl~~~~~~~~~~~~g~~-~-~~~~~~~~~~~~~~~~~~ 152 (416)
T PRK13034 79 AIERAKQLFGCD---YANVQPHSGSQANGAVYLAL-LKPGDTILGMSLSHGGHLTHGAK-V-SLSGKWYNAVQYGVDRLT 152 (416)
T ss_pred HHHHHHHHhCCC---ceEEecCCcHHHHHHHHHHh-cCCCCEEEEcCccceeeeecCCc-c-eeccceeeeEEccccccc
Confidence 666999999985 45677889999999999999 999999876544 4321111100 0 0012222 244444345
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCC-CCCCCCc
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLG-LSLFKPD 338 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~-l~~~~~D 338 (588)
+.+|++++++++.. .++++|++.+ ..+|...|+++| ++|+++|+++++|++|.++.-..... .....+|
T Consensus 153 ~~~d~~~le~~l~~-------~~~klVi~~~--~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~D 223 (416)
T PRK13034 153 GLIDYDEVEELAKE-------HKPKLIIAGF--SAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAH 223 (416)
T ss_pred CCcCHHHHHHHHhh-------cCCeEEEECC--CccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCce
Confidence 67899999998862 3578887754 347899999999 99999999999999988762111110 0112389
Q ss_pred EEEeccCccCCCCCCceEEEEEeCcch-hcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHH
Q 037063 339 FLICSFYKIFGENPSGFGCLFVKKSSA-SVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVEC 417 (588)
Q Consensus 339 ~vv~S~~K~~G~~P~G~G~L~v~~~~~-~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~ 417 (588)
++++|+||+++. |.| |+++.+++.+ +.++...+. ++. +++.... .+++.
T Consensus 224 i~~~s~~K~l~g-~~G-G~v~~~~~~~~~~~~~~~~~--~~~-----------------------~~~~~~~---~aa~~ 273 (416)
T PRK13034 224 VVTTTTHKTLRG-PRG-GMILTNDEEIAKKINSAVFP--GLQ-----------------------GGPLMHV---IAAKA 273 (416)
T ss_pred EEEEeCcccCCC-CCC-eEEEECcHHHHHHHHhhcCC--ccc-----------------------CCccHHH---HHHHH
Confidence 999999998842 666 6666665443 444443322 110 0111111 13434
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHH
Q 037063 418 KGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLA 497 (588)
Q Consensus 418 ~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l 497 (588)
.++..+...+.....+++..++++|+++|.++ ++++..+. ..++++.+.+.+.. .....+.+.|
T Consensus 274 ~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~----------G~~~~~~~---~~t~i~~v~~~~~~---~~~~~~~~~L 337 (416)
T PRK13034 274 VAFGEALQPEFKTYAKQVIANAQALAEVLKER----------GYDLVSGG---TDNHLLLVDLRPKG---LSGKDAEQAL 337 (416)
T ss_pred HHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc----------CCEeccCC---CCCcEEEEEcCCCC---CCHHHHHHHH
Confidence 44444332234567899999999999999875 34444331 23567666665422 4567787888
Q ss_pred HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCC----CCCHHHHHHHHHHHHHhhh
Q 037063 498 DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGC----LTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 498 ~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~----~~t~eDv~~li~~l~~~l~ 567 (588)
.+.||.+..-. -|+. ... ......||+|++. ..+++||+++++.|++.+.
T Consensus 338 ~~~GI~v~~~~--~p~~-----------~~~-------p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 338 ERAGITVNKNT--VPGD-----------TES-------PFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred HhCCcEEeccC--CCCC-----------CcC-------CCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 99999886310 0000 000 0112279999998 4559999999999999876
No 120
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=2.3e-19 Score=190.76 Aligned_cols=167 Identities=17% Similarity=0.143 Sum_probs=128.4
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcC-CCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVY-DHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~-e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+.++++|+++.|.+ + +++++|+++|+.+++.++ +++||+|++.. .|++ .+..+..+++..|+++..++.
T Consensus 51 ~pt~~~L~~~lA~l~g~~--~--~i~~~sg~~Ai~~~l~~l-~~~GD~Vl~~~~~y~~-~~~~~~~~~~~~gi~v~~vd~ 124 (386)
T PRK08045 51 NPTRDVVQRALAELEGGA--G--AVLTNTGMSAIHLVTTVF-LKPGDLLVAPHDCYGG-SYRLFDSLAKRGCYRVLFVDQ 124 (386)
T ss_pred CccHHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHH-cCCCCEEEEcCCCcHH-HHHHHHHHHhhCCeEEEEeCC
Confidence 345679999999999962 3 999999999999999998 89999977554 4543 333334555556667777642
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
.|.++++++++ +++++|++++++|+||.+.|+++| ++|+++|++|++|++...+....+++ +
T Consensus 125 ------~d~e~l~~~l~--------~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl~---~ 187 (386)
T PRK08045 125 ------GDEQALRAALA--------EKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNPLA---L 187 (386)
T ss_pred ------CCHHHHHHhcc--------cCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCchh---h
Confidence 47889998887 689999999999999999999999 99999999999999987763333443 3
Q ss_pred CCcEEEeccCccCCCCCCc--eEEEEEe-Ccchhcc
Q 037063 336 KPDFLICSFYKIFGENPSG--FGCLFVK-KSSASVL 368 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~G~L~v~-~~~~~~l 368 (588)
.+|+++.|++|+++. +.+ .|+++++ +++++++
T Consensus 188 gaDivv~S~tK~l~G-~~d~~~G~vi~~~~~~~~~l 222 (386)
T PRK08045 188 GADLVLHSCTKYLNG-HSDVVAGVVIAKDPDVVTEL 222 (386)
T ss_pred CCCEEEeecceeccC-CCCceeEEEEeCcHHHHHHH
Confidence 489999999997762 544 5777664 3444433
No 121
>PRK08912 hypothetical protein; Provisional
Probab=99.86 E-value=5.2e-19 Score=188.91 Aligned_cols=308 Identities=12% Similarity=0.038 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCc-eEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDY-TLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~-~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
++.+.+.+.+.+.+|.+.+.. +|++|+|+++|+.+++.++ +++||+|++....+... ...++..|++++.++++
T Consensus 67 ~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~-~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~~~~~ 141 (387)
T PRK08912 67 ELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLAL-VEPGDEVVLFQPLYDAY----LPLIRRAGGVPRLVRLE 141 (387)
T ss_pred HHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCchhh----HHHHHHcCCEEEEEecC
Confidence 333344444444445433323 5999999999999999998 88999977655443322 34567789999999987
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC----CCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG----SKDMDT 329 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~----~~d~~~ 329 (588)
..++.++.++|++.+. ++++++++++++||||..+|.++ | ++|+++++++|+|.+..- +....+
T Consensus 142 ~~~~~~~~~~l~~~~~--------~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 213 (387)
T PRK08912 142 PPHWRLPRAALAAAFS--------PRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIP 213 (387)
T ss_pred cccCcCCHHHHHHHhC--------ccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcC
Confidence 4467899999999887 67899999999999999999655 6 789999999999998421 100111
Q ss_pred C-CCCC-CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCc
Q 037063 330 L-GLSL-FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSI 407 (588)
Q Consensus 330 l-~l~~-~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~ 407 (588)
+ .+.. ...++++.|++|.||.+..++|++++++++++.+....... ..+++..
T Consensus 214 ~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~-------------------------~~~~~~~ 268 (387)
T PRK08912 214 LMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKAHQFL-------------------------TFTTPPN 268 (387)
T ss_pred hhhCCCccCceEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhc-------------------------cccCChH
Confidence 1 1111 23579999999999953445999999988876654322100 0011111
Q ss_pred cchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCC
Q 037063 408 SGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTR 487 (588)
Q Consensus 408 ~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~ 487 (588)
.+ .++..++...... ++++.++.+..++.+.+.|.++ +++++.+ ..+.++.+.+... +..
T Consensus 269 ~q----~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~----~g~~~l~~~l~~~-~~~ 328 (387)
T PRK08912 269 LQ----AAVAYGLGKPDDY-FEGMRADLARSRDRLAAGLRRI----------GFPVLPS----QGTYFLTVDLAPL-GLA 328 (387)
T ss_pred HH----HHHHHHHhCCHHH-HHHHHHHHHHHHHHHHHHHHhC----------CCcccCC----CcceEEEeccccc-CCC
Confidence 11 2222333211111 3556677777788888888874 2444433 1233444455431 111
Q ss_pred cCHHHHH-HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 488 IDPALVQ-KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 488 i~~~~v~-~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
.+...+. ++++++||.+.+|..... . ..+.+++|++++. ..++++..++.|++++
T Consensus 329 ~~~~~~~~~l~~~~gV~v~pg~~f~~---------------~-------~~~~~~iRl~~~~--~~~~l~~~l~rl~~~l 384 (387)
T PRK08912 329 EDDVAFCRRLVEEAGVAAIPVSAFYE---------------E-------DPVTSVVRFCFAK--RDATLDEAVERLAAAR 384 (387)
T ss_pred CCHHHHHHHHHhcCCEEEecchhhCC---------------C-------CCCCCEEEEEEeC--CHHHHHHHHHHHHHHH
Confidence 3344454 456788999988732210 0 0122399999985 5899999999988876
Q ss_pred hh
Q 037063 567 DA 568 (588)
Q Consensus 567 ~~ 568 (588)
+.
T Consensus 385 ~~ 386 (387)
T PRK08912 385 RR 386 (387)
T ss_pred hc
Confidence 53
No 122
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=1.6e-19 Score=194.13 Aligned_cols=162 Identities=16% Similarity=0.096 Sum_probs=129.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+.++++|+++.|++ + .+++++++.|+.+++.++ +++||+|+ ....|.. .+..+...+++.|++++.++
T Consensus 68 ~p~~~~Le~~lA~l~g~~---~-av~~sSG~aAi~~al~al-l~~Gd~Vv~~~~~y~~-t~~~~~~~l~~~Gi~v~~vd- 140 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGV---A-ALLLASGQAAETFAILNL-AGAGDHIVSSPRLYGG-TYNLFHYTLPKLGIEVSFVE- 140 (436)
T ss_pred CchHHHHHHHHHHHhCCC---e-EEEEccHHHHHHHHHHHH-hCCCCEEEEeCCcchH-HHHHHHHHhhcCeEEEEEEC-
Confidence 344668999999999984 2 677788899999999998 89999966 5556654 44444555677899998885
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ . .++++++++|+ ++|++|++.+++|++|.+.|+++| ++||++|++++||+++..|....++. +
T Consensus 141 d-~---~d~e~l~~ai~--------~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl~---~ 205 (436)
T PRK07812 141 D-P---DDLDAWRAAVR--------PNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPLE---H 205 (436)
T ss_pred C-C---CCHHHHHHhCC--------CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCCchh---c
Confidence 3 2 27888988887 789999999999999999999999 99999999999999988774333332 4
Q ss_pred CCcEEEeccCccCCCCCCc--eEEEEEeCc
Q 037063 336 KPDFLICSFYKIFGENPSG--FGCLFVKKS 363 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~G~L~v~~~ 363 (588)
++|+++.|+||++| +.| +|.+++...
T Consensus 206 GaDivv~S~tK~lg--g~G~~i~G~vv~~~ 233 (436)
T PRK07812 206 GADIVVHSATKYLG--GHGTAIAGVIVDGG 233 (436)
T ss_pred CCCEEEEecccccC--CCCCeEEEEEEcCC
Confidence 59999999999888 444 788887544
No 123
>PLN02271 serine hydroxymethyltransferase
Probab=99.86 E-value=3.2e-19 Score=191.17 Aligned_cols=366 Identities=12% Similarity=0.047 Sum_probs=235.9
Q ss_pred CCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCch--hHHHHHHHHHHHHHhCCC
Q 037063 118 IGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEE--SELESKIRKRIMDFMNIS 195 (588)
Q Consensus 118 a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~--~~~~~~~r~~ia~~lga~ 195 (588)
++-...|+.+++++...+.... ..+.+.. .+|++.+ .+++.-+.++..++||++
T Consensus 155 ASEN~~S~av~~algS~ltnkY-----------------------aEG~pG~-Ryy~G~~~iD~iE~la~era~~lF~~~ 210 (586)
T PLN02271 155 ASENFVCRAVMEALGSHLTNKY-----------------------SEGMPGA-RYYTGNQYIDQIERLCCERALAAFGLD 210 (586)
T ss_pred cccccCCHHHHHHhcCcccccC-----------------------CCCCCCC-cCCCCChhHHHHHHHHHHHHHHHhCCc
Confidence 7778899999999754443211 1122222 2344432 678888899999999987
Q ss_pred CCCc-eEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHH----HHHHhcCCEEEEEe--ccCCCCccCHHH
Q 037063 196 EDDY-TLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMI----ESSKKRGARVSSAE--FAWPNLRIHSGK 267 (588)
Q Consensus 196 ~~e~-~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~----~~a~~~G~~v~~v~--~~~~~~~i~~e~ 267 (588)
.+++ .=|---+++.|+..+..++ ++|||+|+. +.+|......... ..+...|..+..++ ++.+++.+|.++
T Consensus 211 ~~~~gaNVQp~SGs~AN~aV~~AL-l~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~ 289 (586)
T PLN02271 211 SEKWGVNVQPYSCTSANFAVYTGL-LLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDK 289 (586)
T ss_pred ccccccceeeccHHHHHHHHHHHh-cCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHH
Confidence 6443 1233348888999999999 999999774 6655542222210 22344576666666 655678999999
Q ss_pred HHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCC---CCCCCcEEEec
Q 037063 268 LMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGL---SLFKPDFLICS 343 (588)
Q Consensus 268 l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l---~~~~~D~vv~S 343 (588)
|++.+.. .+++||++.+..++ ..+|+++| ++|+++|+++++|++|.+|. ...++ ....+|+++++
T Consensus 290 lek~a~~-------~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGL--Ia~g~~~sP~~~aDvvt~T 358 (586)
T PLN02271 290 LEEKALD-------FRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGL--VAAKECVNPFDYCDIVTST 358 (586)
T ss_pred HHHHhhh-------cCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccc--cccCcCCCCCcCCcEEEeC
Confidence 9985442 78999999998887 78999999 99999999999999999872 21111 11248999999
Q ss_pred cCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcc-cccccccccccccCCCCCccchhhHHHHHHHHHH
Q 037063 344 FYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEI-IELETLDESSQSKFPESSISGVSSKLVECKGLDH 422 (588)
Q Consensus 344 ~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~-~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~ 422 (588)
+||+|.. |.| |+++++++....+++...++ +.....+ +. ..++..-.+.+ +.|+.+.. + +++..++++
T Consensus 359 THKtLrG-PrG-G~I~~r~~~~~~~~g~~gs~-s~~~~~~---d~~~kI~~aVfPgl-qgGphn~~-I---AalAvalke 427 (586)
T PLN02271 359 THKSLRG-PRG-GIIFYRKGPKLRKQGMLLSH-GDDNSHY---DFEEKINFAVFPSL-QGGPHNNH-I---AALAIALKQ 427 (586)
T ss_pred CcccCCC-CCc-eEEEecccccccccCCcccc-ccccccH---HHHHHhhcccCCcc-ccChhHHH-H---HHHHHHHHH
Confidence 9996642 999 88888877543333332221 1100000 00 00000001234 56665544 4 788899998
Q ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCc
Q 037063 423 ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNI 502 (588)
Q Consensus 423 l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI 502 (588)
+.........+++...++.|.+.|.+. +++|++.. .....+.+.+... .++...+++.|++.||
T Consensus 428 a~~~efk~Ya~QVv~NAkaLA~~L~~~----------G~~vv~gg---TdnHlvLvDl~~~---g~~G~~ae~~Le~~~I 491 (586)
T PLN02271 428 VATPEYKAYMQQVKKNAQALASALLRR----------KCRLVTGG---TDNHLLLWDLTTL---GLTGKNYEKVCEMCHI 491 (586)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHC----------CCeEeeCC---CCcceeeecCccc---CCCHHHHHHHHHHcCe
Confidence 766555778888888889999998873 45555432 2346666666432 2678899999999999
Q ss_pred EeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCC----CHHHHHHHHHHHHHhhh
Q 037063 503 SLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLT----NFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 503 ~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~----t~eDv~~li~~l~~~l~ 567 (588)
.+---. + |+. . ...-.+.|||.....| .++|++.+.++|.+.++
T Consensus 492 ~~Nkn~-i-P~d--~-----------------~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 492 TLNKTA-I-FGD--N-----------------GTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred Eecccc-C-CCC--C-----------------CCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 863210 0 110 0 0011126888765444 46899999999998877
No 124
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.86 E-value=1.5e-19 Score=191.64 Aligned_cols=304 Identities=16% Similarity=0.079 Sum_probs=199.4
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+++++++++++|.+ + .++++++++|+.+++.++ +++||+|++. ..|++ ....+...++..|+++..++.
T Consensus 39 ~p~~~~le~~la~l~g~~--~--a~~~~sG~~Ai~~~l~~l-~~~gd~Vl~~~~~y~~-~~~~~~~~~~~~g~~~~~v~~ 112 (369)
T cd00614 39 NPTVDALEKKLAALEGGE--A--ALAFSSGMAAISTVLLAL-LKAGDHVVASDDLYGG-TYRLFERLLPKLGIEVTFVDP 112 (369)
T ss_pred ChhHHHHHHHHHHHHCCC--C--EEEEcCHHHHHHHHHHHH-cCCCCEEEECCCCcch-HHHHHHHHHhhcCeEEEEeCC
Confidence 566789999999999973 2 677788899999999998 8999997654 45554 444445566788999998876
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ ++++++++++ +++++|++.+++|++|.+.|+++| ++|+++|+++++|++...+....+++ +
T Consensus 113 ~------d~~~l~~~i~--------~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~~~~~---~ 175 (369)
T cd00614 113 D------DPEALEAAIK--------PETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQRPLE---L 175 (369)
T ss_pred C------CHHHHHHhcC--------CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcCChhh---h
Confidence 4 5788988887 689999999999999999999999 99999999999999987774223333 3
Q ss_pred CCcEEEeccCccCCCCCC--ceEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 336 KPDFLICSFYKIFGENPS--GFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~--G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
++|+++.|++|.+|. +. ..|+++.++ +++++++...... | ++.+ ..
T Consensus 176 g~Divv~S~tK~l~g-~~~~~gG~v~~~~~~l~~~l~~~~~~~-g-------------------------~~~~--p~-- 224 (369)
T cd00614 176 GADIVVHSATKYIGG-HSDVIAGVVVGSGEALIQRLRFLRLAL-G-------------------------TILS--PF-- 224 (369)
T ss_pred CCcEEEeccceeccC-CCCceEEEEEeCcHHHHHHHHHHHHhh-C-------------------------CCCC--HH--
Confidence 489999999998872 22 278888877 6666554322100 0 0111 11
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCC------------CCCcccEEEEE
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKV------------MFDRGPSLAFN 479 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~------------~~~rg~iv~f~ 479 (588)
....++..++. ++...++..+.+.++.+.|.+. |.| +++-|.- ....|++++|.
T Consensus 225 --~a~~~l~~l~t--l~~r~~~~~~na~~la~~L~~~---------~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~ 291 (369)
T cd00614 225 --DAWLLLRGLKT--LPLRMERHSENALKVAEFLEKH---------PKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFE 291 (369)
T ss_pred --HHHHHHcCCCC--HHHHHHHHHHHHHHHHHHHHcC---------CCccEEECCCCCCCchHHHHHHhcCCCceEEEEE
Confidence 11122333322 3445566677777888888764 222 3333310 11347899999
Q ss_pred eecCCCCCcCHHHHHHHHHhCCcEe---cccc----ccCcccccchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCCCC
Q 037063 480 VFDWNGTRIDPALVQKLADRHNISL---SCGF----LQNIFFSGEYEQERVRVLETRSGTNETRSGV--SVVTAALGCLT 550 (588)
Q Consensus 480 ~~~~~g~~i~~~~v~~~l~~~gI~v---~~G~----~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~~ 550 (588)
+.+ +.+.+.+++++..+.- +-|. .|++....... ..... .. ..|+ +.||+|+|.
T Consensus 292 l~~------~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~-~~~~~-~~-------~~g~~~~liR~svGl-- 354 (369)
T cd00614 292 LKG------GLEAAKKFLNALKLFSLAVSLGGVESLVEHPASMTHSQ-LPPEE-RA-------AAGITPGLVRLSVGI-- 354 (369)
T ss_pred eCC------CHHHHHHHHHcCCcceEcccCCCCceeeeCCccccccc-CCHHH-HH-------hcCCCCCeEEEEeCc--
Confidence 863 2556677777766542 2221 11111111000 00000 01 1343 389999998
Q ss_pred CHHHHHHHHHHHHHhhh
Q 037063 551 NFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 551 t~eDv~~li~~l~~~l~ 567 (588)
||++.|++-|.+.|+
T Consensus 355 --E~~~dl~~dl~~al~ 369 (369)
T cd00614 355 --EDVEDLIADLEQALK 369 (369)
T ss_pred --CCHHHHHHHHHHhhC
Confidence 899999999887653
No 125
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.86 E-value=5.3e-19 Score=188.93 Aligned_cols=165 Identities=10% Similarity=0.057 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
...+++++++++++|+++ .+.+++++.|+.+++.++ +++||+|++. ..|.+ ....+...++..|++++.++.
T Consensus 65 p~~~~Le~~lA~l~G~~~----~~~~~sG~~Ai~~~l~~~-l~~Gd~Vl~~~~~y~~-~~~~~~~~~~~~G~~v~~vd~- 137 (398)
T PRK07504 65 PTVDMFEKRMCALEGAED----ARATASGMAAVTAAILCQ-VKAGDHVVAARALFGS-CRYVVETLLPRYGIESTLVDG- 137 (398)
T ss_pred chHHHHHHHHHHHhCCCe----eeEecCHHHHHHHHHHHH-hCCCCEEEEcCCchhH-HHHHHHHHHhhcCeEEEEECC-
Confidence 345789999999999963 334678888988777776 8999997654 44544 222234556778999998852
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFK 336 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~ 336 (588)
+|+++++++|+ ++|++|++++++|++|.+.|+++| ++|+++|+++++|+++..+....++. .+
T Consensus 138 -----~d~e~l~~ai~--------~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~~---~g 201 (398)
T PRK07504 138 -----LDLDNWEKAVR--------PNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQKPLE---LG 201 (398)
T ss_pred -----CCHHHHHHhcC--------cCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCCchh---hC
Confidence 58899999987 789999999999999999999999 99999999999999987663222332 24
Q ss_pred CcEEEeccCccCCCCCCceE-EEEEeCcchh
Q 037063 337 PDFLICSFYKIFGENPSGFG-CLFVKKSSAS 366 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G~G-~L~v~~~~~~ 366 (588)
+|+++.|++|++|.+..++| +++.+++.+.
T Consensus 202 aDivv~S~sK~l~g~g~~~GG~vv~~~~~i~ 232 (398)
T PRK07504 202 AHIVVYSATKHIDGQGRCLGGVVLSDKAWIE 232 (398)
T ss_pred CCEEEeeccccccCCccceEEEEEeCcHHHH
Confidence 89999999998873222354 5555565543
No 126
>PLN02880 tyrosine decarboxylase
Probab=99.86 E-value=1.8e-19 Score=196.51 Aligned_cols=329 Identities=13% Similarity=0.092 Sum_probs=204.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCC-----ceEEEecCHHHHHHHHHHhCC--------CCCCCe--EEEcCCCchhHHHHHHH
Q 037063 178 SELESKIRKRIMDFMNISEDD-----YTLVFTANQSSAFKLLAESYP--------FYSNPR--LLTVYDHENEAAALMIE 242 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e-----~~vvft~g~T~al~lv~~s~~--------~~~gd~--ll~~~e~~s~~~~~~~~ 242 (588)
.+++.++-+++++++|.+++. -..+||+|+|+|+-..+.... +....+ |+++..-|. ++ .+
T Consensus 121 ~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~-Sv---~K 196 (490)
T PLN02880 121 TELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHS-AL---QK 196 (490)
T ss_pred HHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchH-HH---HH
Confidence 688999999999999997531 247899999998644332211 111123 333433333 23 45
Q ss_pred HHHhcCC---EEEEEeccC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEE
Q 037063 243 SSKKRGA---RVSSAEFAW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLL 317 (588)
Q Consensus 243 ~a~~~G~---~v~~v~~~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvv 317 (588)
.|.-.|. .++.||.+. .++++|+++|+++|.+. +.....+-+|+.+..++.+|.+.|+++| ++|+++|++++|
T Consensus 197 aa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~--~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHV 274 (490)
T PLN02880 197 ACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTD--LSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHV 274 (490)
T ss_pred HHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHH--HHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEE
Confidence 6677787 478899873 36789999999999732 1223457889999999999999999999 999999999999
Q ss_pred eCCCcCCCC-CCCC--CCC-CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccc
Q 037063 318 DATALGSKD-MDTL--GLS-LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELET 393 (588)
Q Consensus 318 Daa~~~~~d-~~~l--~l~-~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~ 393 (588)
|||..++.- ...+ .+. ..++|++++++|||++. |.|+|++++|+... ......... ........ .
T Consensus 275 DaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~-P~~~g~llvr~~~~-l~~~~~~~~-~Yl~~~~~---~----- 343 (490)
T PLN02880 275 DAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLT-NFDCSLLWVKDRNA-LIQSLSTNP-EFLKNKAS---Q----- 343 (490)
T ss_pred ehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCC-CccEEEEEEeCHHH-HHHHHccCH-HHhcCccc---c-----
Confidence 999665410 1110 122 13599999999998886 99999999996321 111111110 00000000 0
Q ss_pred ccccccccCCCCCccchhhHH-HHHHHHHH---HHHhCHHHHHHHHH---HHHHHHHHHHHcccCCCCCCCCCeEEEeCC
Q 037063 394 LDESSQSKFPESSISGVSSKL-VECKGLDH---ADALGLILISNRAR---YLINWLANALMNLHHPHSETGIPLVRIYGP 466 (588)
Q Consensus 394 ~~~~~f~e~GT~~~~~~~~~~-al~~aL~~---l~~~G~~~i~~r~~---~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p 466 (588)
..++.++..+..-. --..+|+. ++.+|.+.+.++++ +|++++.+.|.+ .+.++++.|
T Consensus 344 -------~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~---------~~~~el~~~ 407 (490)
T PLN02880 344 -------ANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQ---------DSRFEVVTP 407 (490)
T ss_pred -------ccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhc---------CCCEEEecC
Confidence 00111111000000 00023333 44567777777777 999999999987 367999886
Q ss_pred CCCCCcccEEEEEeecCCCCC-----cCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccE
Q 037063 467 KVMFDRGPSLAFNVFDWNGTR-----IDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSV 541 (588)
Q Consensus 467 ~~~~~rg~iv~f~~~~~~g~~-----i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~ 541 (588)
. ..++|+|.+....... +....++++.+...+.+.... ..|..+
T Consensus 408 ~----~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~---------------------------~~g~~~ 456 (490)
T PLN02880 408 R----IFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTV---------------------------LSGKYV 456 (490)
T ss_pred C----ceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEE---------------------------ECCEEE
Confidence 3 4689999987421100 111222333333455554321 144459
Q ss_pred EEEecCCCCC-HHHHHHHHHHHHHhhhhhh
Q 037063 542 VTAALGCLTN-FEDTYRLWAFVSRFLDADF 570 (588)
Q Consensus 542 vRvSlg~~~t-~eDv~~li~~l~~~l~~~~ 570 (588)
+|+|++.++| .+||+++++.|.+..++.+
T Consensus 457 lR~~~~n~~tt~~di~~~~~~i~~~~~~~~ 486 (490)
T PLN02880 457 LRFAVGAPLTEERHVTAAWKVLQDEASKLL 486 (490)
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999975555 5999999999998766543
No 127
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=1.6e-19 Score=191.22 Aligned_cols=280 Identities=10% Similarity=0.078 Sum_probs=191.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNL 261 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~ 261 (588)
.++|+.|++++++++++ |++|+|+++++.+++.++ .++||+|++....+. .....++..|++++.++.+ ++
T Consensus 67 ~~Lr~aia~~~~~~~~~--I~vt~Gs~e~i~~~~~~l-~~~gd~vlv~~P~y~----~~~~~~~~~g~~v~~v~~~--~~ 137 (366)
T PRK01533 67 TTLRQTIANKLHVKMEQ--VLCGSGLDEVIQIISRAV-LKAGDNIVTAGATFP----QYRHHAIIEGCEVKEVALN--NG 137 (366)
T ss_pred HHHHHHHHHHhCCCcce--EEECCCHHHHHHHHHHHh-cCCCCEEEEcCCcHH----HHHHHHHHcCCEEEEeecC--CC
Confidence 47999999999998765 999999999999999999 899999776654432 2245567789999999985 45
Q ss_pred ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHH---HcCcEEEEeCCCc--CCC-C-CCCCC-C
Q 037063 262 RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAA---EKGWHVLLDATAL--GSK-D-MDTLG-L 332 (588)
Q Consensus 262 ~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~---~~g~~vvvDaa~~--~~~-d-~~~l~-l 332 (588)
.+|+++|+++++ ++++++++++++||||..+|.+++ ++++ +++ ++|+|.+.. ... + ...+. +
T Consensus 138 ~~d~~~l~~~~~--------~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~ 208 (366)
T PRK01533 138 VYDLDEISSVVD--------NDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLL 208 (366)
T ss_pred CcCHHHHHHHhC--------cCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHh
Confidence 699999999887 678999999999999999999987 5554 445 677898732 110 0 01111 1
Q ss_pred CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 333 SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 333 ~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
...+--+++.||.|.||++...+|+++..+++++.+...... +. .+....
T Consensus 209 ~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~~~~--~~--------------------------~~~~~q-- 258 (366)
T PRK01533 209 EKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNVVRLP--FN--------------------------VSSLAQ-- 258 (366)
T ss_pred ccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHHhcCC--CC--------------------------cCHHHH--
Confidence 122245788899999986456699999988887766533211 00 111111
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHH
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~ 492 (588)
.++..+|+.- .. ++.+.+..++.++++.+.++.+ +++++. ..++.+-+.+.+ ...
T Consensus 259 -~aa~~~l~~~-~~-~~~~~~~~~~~r~~~~~~l~~~----------g~~~~~-----~~~nf~~~~~~~-------~~~ 313 (366)
T PRK01533 259 -KAATIAFGDD-EF-IEEIVRVNTEGLRQYESFCKEN----------EIPFYQ-----SQTNFIFLPVEN-------GGE 313 (366)
T ss_pred -HHHHHHhCCH-HH-HHHHHHHHHHHHHHHHHHHHhC----------CCccCC-----CcCcEEEEeCCC-------HHH
Confidence 2233444321 11 2444555555666666666654 234433 235555555532 456
Q ss_pred HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 493 VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 493 v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+.+.|.++||.|+. + .+ +||||+| +.+|.++|+++|+++++.
T Consensus 314 ~~~~l~~~GI~Vr~---~--------------------------~~--~iRis~~---~~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 314 IYEACAHAGFIIRP---F--------------------------PN--GVRITVG---TREQNEGVISVLQQHFEN 355 (366)
T ss_pred HHHHHHHCCcEEcc---C--------------------------CC--ceEEeCC---CHHHHHHHHHHHHHHHHh
Confidence 77888889999985 2 11 7999998 789999999999987543
No 128
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=4.2e-19 Score=189.83 Aligned_cols=305 Identities=15% Similarity=0.102 Sum_probs=192.2
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....++++++|+++.|++ + .++++|+++|+.+++.++ +++||+|++. ..|.. ....+..+++..|.+++.++.
T Consensus 59 ~p~~~~Le~~lA~l~g~~---~-~v~~~sG~~Ai~~~l~al-l~pGD~Vvv~~p~Y~~-t~~~~~~~~~~~g~~v~~v~~ 132 (405)
T PRK08776 59 NPTRDLLGEALAELEGGA---G-GVITATGMGAINLVLNAL-LQPGDTLVVPHDAYGG-SWRLFNALAKKGHFALITADL 132 (405)
T ss_pred ChHHHHHHHHHHHHhCCC---c-eEEEcCHHHHHHHHHHHH-hCCCCEEEEccCCchH-HHHHHHHHHHhcCcEEEEECC
Confidence 445678999999999973 2 355666689999999999 9999997654 44443 333335556677888888764
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
.|.++|+++++ ++|++|++++++|+||.+.++++| ++|+++|++|++|+++..|....++. +
T Consensus 133 ------~d~~~l~~~i~--------~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl~---~ 195 (405)
T PRK08776 133 ------TDPRSLADALA--------QSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPLE---F 195 (405)
T ss_pred ------CCHHHHHHhcC--------cCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCccc---c
Confidence 36788988887 689999999999999999999999 99999999999999987763223332 3
Q ss_pred CCcEEEeccCccCCCCCCc--eEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 336 KPDFLICSFYKIFGENPSG--FGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
++|+++.|++|++|. +.+ .|++++++ ++.+++...... ...+.+....
T Consensus 196 gaDivv~S~tK~l~g-~~~~~~G~vv~~~~~l~~~l~~~~~~--------------------------~g~~~s~~~a-- 246 (405)
T PRK08776 196 GADLVLHSTTKYING-HSDVVGGAVVARDAELHQQLVWWANA--------------------------LGLTGSPFDA-- 246 (405)
T ss_pred cCCEEEecCceeecC-CCCceEEEEEeCCHHHHHHHHHHHHh--------------------------cCCCCCHHHH--
Confidence 489999999998863 444 57776654 343433211100 0001111111
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCC------------CCcccEEEEE
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVM------------FDRGPSLAFN 479 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~------------~~rg~iv~f~ 479 (588)
..+..+++.+ +...++..+.+..+.+.|++. |.| +|+-|... ..-|++++|.
T Consensus 247 -~l~~~gl~tl-----~~r~~~~~~na~~la~~L~~~---------p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~ 311 (405)
T PRK08776 247 -FLTLRGLRTL-----DARLRVHQENADAIAALLDGH---------AAVNQVYYPGLASHPGHALAARQQKGFGAMLSFE 311 (405)
T ss_pred -HHHHhhhCcH-----HHHHHHHHHHHHHHHHHHHcC---------CCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEE
Confidence 2222444433 445566666667777777763 333 45555311 1246899999
Q ss_pred eecCCCCCcCHHHHHHHHHhCCc---Eecccc----ccCcccccchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCCCC
Q 037063 480 VFDWNGTRIDPALVQKLADRHNI---SLSCGF----LQNIFFSGEYEQERVRVLETRSGTNETRSGV--SVVTAALGCLT 550 (588)
Q Consensus 480 ~~~~~g~~i~~~~v~~~l~~~gI---~v~~G~----~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~~ 550 (588)
+.+ +.+.+.++++...+ ..+-|. .|++.....+. .... ... ..|+ +.||+|+|.
T Consensus 312 ~~~------~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~-~~~~-~~~-------~~gi~~~liR~svGl-- 374 (405)
T PRK08776 312 LEG------GEAAVRAFVDGLRYFTLAESLGGVESLIAHPASMTHAA-MTAE-ARA-------AAGISDGLLRLSVGI-- 374 (405)
T ss_pred EcC------CHHHHHHHHHhCCcceEccCCCCCceEEECCccccccc-CCHH-HHH-------hcCCCCCeEEEEeCc--
Confidence 864 14455666666554 223332 22221111110 0000 011 1343 389999997
Q ss_pred CHHHHHHHHHHHHHhhhh
Q 037063 551 NFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 551 t~eDv~~li~~l~~~l~~ 568 (588)
||++.|++-|.+.|++
T Consensus 375 --E~~~dli~dl~~al~~ 390 (405)
T PRK08776 375 --ESAEDLLIDLRAGLAR 390 (405)
T ss_pred --CCHHHHHHHHHHHHHH
Confidence 7788888777777765
No 129
>PLN00175 aminotransferase family protein; Provisional
Probab=99.85 E-value=1.2e-18 Score=187.60 Aligned_cols=305 Identities=12% Similarity=0.090 Sum_probs=196.8
Q ss_pred HHHHHHHHHHHHHhCC--CCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 179 ELESKIRKRIMDFMNI--SEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga--~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++.+.+.+.+.+..|. +++ .+|++|+|+++|+.+++.++ +++||+|++....+... ...++..|++++.+++
T Consensus 95 ~Lr~aia~~~~~~~g~~~~~~-~~I~vt~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~----~~~~~~~g~~~~~v~~ 168 (413)
T PLN00175 95 ELNSAIAERFKKDTGLVVDPE-KEVTVTSGCTEAIAATILGL-INPGDEVILFAPFYDSY----EATLSMAGAKIKTVTL 168 (413)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CCEEEeCCHHHHHHHHHHHh-CCCCCEEEEeCCCchhH----HHHHHHcCCEEEEEEC
Confidence 3444444444444454 343 24999999999999999998 89999977655444322 3455678999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcCC-C--CCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALGS-K--DMDT 329 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~~-~--d~~~ 329 (588)
+.+++.++.++|++++. +++++|++++++||||..++.++ | ++|+++|++||+|.+...- . +..+
T Consensus 169 ~~~~~~~~~~~l~~~~~--------~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s 240 (413)
T PLN00175 169 RPPDFAVPEDELKAAFT--------SKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHIS 240 (413)
T ss_pred CcccCCCCHHHHHHhcC--------cCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccC
Confidence 74456789999999987 67999999999999999998665 5 7889999999999983221 0 0111
Q ss_pred -CCCCC-CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCc
Q 037063 330 -LGLSL-FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSI 407 (588)
Q Consensus 330 -l~l~~-~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~ 407 (588)
..+.. ....+++.|+.|.||.+..++|++++++++++.+...... . ..+++.+
T Consensus 241 ~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~~---~----------------------~~~~s~~ 295 (413)
T PLN00175 241 MASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSF---L----------------------TFATATP 295 (413)
T ss_pred hhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHHHHHHhh---c----------------------cCCCCHH
Confidence 11111 2345888999999885456799999998887655432210 0 0111222
Q ss_pred cchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE-EEeecCCCC
Q 037063 408 SGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA-FNVFDWNGT 486 (588)
Q Consensus 408 ~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~-f~~~~~~g~ 486 (588)
.+ .++..+|+.-+.. ++++.++.+..++.+.+.|.++ ++.++.| .|+.+. +.+.. .+
T Consensus 296 ~Q----~a~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~p-----~g~~f~~~~~~~-~~- 353 (413)
T PLN00175 296 MQ----WAAVAALRAPESY-YEELKRDYSAKKDILVEGLKEV----------GFKVYPS-----SGTYFVMVDHTP-FG- 353 (413)
T ss_pred HH----HHHHHHHhCCHHH-HHHHHHHHHHHHHHHHHHHHHC----------CCeecCC-----CeeEEEEEeccc-cC-
Confidence 22 2333444321111 4666777777788888888874 2445433 344433 33321 11
Q ss_pred CcCHHH-HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 487 RIDPAL-VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 487 ~i~~~~-v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
..+... +..++++.||.+.+|..+.. . ...+...||++++. +.|+++..++.|+++
T Consensus 354 ~~~~~~~~~~ll~~~gV~v~pg~~F~~---------------~------~~~~~~~iRls~~~--~~e~l~~~~~rL~~~ 410 (413)
T PLN00175 354 FENDIAFCEYLIEEVGVAAIPPSVFYL---------------N------PEDGKNLVRFAFCK--DEETLRAAVERMKTK 410 (413)
T ss_pred CCCHHHHHHHHHHhCCEEEeCchHhCC---------------C------CCCCCCEEEEEEcC--CHHHHHHHHHHHHHH
Confidence 112334 45566788999988843210 0 00122389999984 789999999999887
Q ss_pred hh
Q 037063 566 LD 567 (588)
Q Consensus 566 l~ 567 (588)
++
T Consensus 411 ~~ 412 (413)
T PLN00175 411 LK 412 (413)
T ss_pred Hh
Confidence 65
No 130
>PRK05968 hypothetical protein; Provisional
Probab=99.85 E-value=1.2e-19 Score=193.49 Aligned_cols=304 Identities=16% Similarity=0.105 Sum_probs=197.4
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
...++++++++++++|++ +.++| ++++.|+.+++.++ +++||+|+ ....|+++ +..+...++..|+++++++.
T Consensus 62 ~p~~~~le~~lA~l~g~~---~av~~-~sG~~Ai~~al~al-~~~Gd~Vl~~~~~y~~t-~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 62 NPTVRAFEEMLAKLEGAE---DARGF-ASGMAAISSTVLSF-VEPGDRIVAVRHVYPDA-FRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred ChhHHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHHHH-hCCCCEEEEeCCCchHH-HHHHHHHHHHcCceEEEeCC
Confidence 455789999999999995 33555 66678999888888 89999966 45566553 33335667788999999875
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ +++++++++. +|++|++.+++|+++.+.|+++| ++|+++|++|++|+++..+....++. +
T Consensus 136 ~------d~~~l~~~i~---------~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p~~---~ 197 (389)
T PRK05968 136 R------DEEAVAKALP---------GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRPIT---L 197 (389)
T ss_pred C------CHHHHHHhcc---------cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCchh---c
Confidence 3 6788887763 58999999999999999999999 99999999999999987763222332 3
Q ss_pred CCcEEEeccCccCCCCCCc--eEEEEEeCcchhcccCCC---CCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 336 KPDFLICSFYKIFGENPSG--FGCLFVKKSSASVLSGST---SSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l~~~~---~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
++|+++.|++|+++. |.+ .|+++.+++++++++... .| +. ..++.+
T Consensus 198 g~Divv~S~tK~l~g-~~~~~gG~i~~~~~~~~~l~~~~~~~~g--~~-------------------------~~~~~A- 248 (389)
T PRK05968 198 GVDLVIHSASKYLGG-HSDTVAGVVAGSKEHIARINAEAYPYLG--AK-------------------------LSPFEA- 248 (389)
T ss_pred CCcEEEeeccccccC-CCCeEEEEEEECHHHHHHHHHHHHHhCC--CC-------------------------CChHHH-
Confidence 489999999998773 544 688888887776654321 11 00 001111
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCC-------CCcccEEEEEeec
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVM-------FDRGPSLAFNVFD 482 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~-------~~rg~iv~f~~~~ 482 (588)
+ .++..++. +....++..+.+.++.+.|+++ |.| .++.|.-. ...+++++|.+.+
T Consensus 249 ---~---~~l~~L~t--l~~r~~~~~~~a~~la~~L~~~---------p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~ 311 (389)
T PRK05968 249 ---W---LLLRGLRT--LPLRMKAHEASALEIARRLKAH---------PVVERVCHPALANHPPAGLSGTSGLFSFIFRE 311 (389)
T ss_pred ---H---HHHcccCc--HHHHHHHHHHHHHHHHHHHHhC---------CCccEEECCCCCCChHHhCCCCceEEEEEECC
Confidence 1 22333333 2444455555688888888873 555 34434211 1246799999863
Q ss_pred CCCCCcCHHHHHHHHHhCCcEeccccccCc---ccccchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCCCCCHHHHHH
Q 037063 483 WNGTRIDPALVQKLADRHNISLSCGFLQNI---FFSGEYEQERVRVLETRSGTNETRSGV--SVVTAALGCLTNFEDTYR 557 (588)
Q Consensus 483 ~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~---~~~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~~t~eDv~~ 557 (588)
| .+...+...|+..+|.++.|..|+. ...... .......... .|+ +.||+|+|+. |++.
T Consensus 312 --~--~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~-~~~~~~~~~~-------~gi~~~liR~SvGlE----~~~d 375 (389)
T PRK05968 312 --G--IDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQ-QKAQPNSAAR-------FGVSPRSVRLHVGLE----GTEA 375 (389)
T ss_pred --H--HHHHHHHHhCCccEEecCCCCCCceeeeCccccc-ccCCHHHHHh-------cCCCCCeEEEEeccC----CHHH
Confidence 2 3455667777778888888887762 111000 0000111111 343 3999999985 4555
Q ss_pred HHHHHHHhhh
Q 037063 558 LWAFVSRFLD 567 (588)
Q Consensus 558 li~~l~~~l~ 567 (588)
|++-|++.|+
T Consensus 376 l~~dl~~al~ 385 (389)
T PRK05968 376 LWADLEQALA 385 (389)
T ss_pred HHHHHHHHHH
Confidence 5555555444
No 131
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.85 E-value=2.3e-19 Score=192.41 Aligned_cols=294 Identities=13% Similarity=0.080 Sum_probs=190.0
Q ss_pred HHHHHHHHHhC------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 183 KIRKRIMDFMN------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 183 ~~r~~ia~~lg------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++|+.|+++++ ++++ .+|++|+|+++|+.+++.++ .++||+|++....+. +....++..|++++.+++
T Consensus 73 ~lr~aia~~~~~~~g~~~~~~-~~I~it~G~~~al~~~~~~~-~~~Gd~Vlv~~P~y~----~~~~~~~~~G~~~~~v~~ 146 (399)
T PRK07681 73 EFHEAVTEYYNNTHNVILNAD-KEVLLLMGSQDGLVHLPMVY-ANPGDIILVPDPGYT----AYETGIQMAGATSYYMPL 146 (399)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CeEEECCCcHHHHHHHHHHh-CCCCCEEEECCCCcc----chHHHHHhcCCEEEEEec
Confidence 56777777664 4441 35999999999999999999 899999776544332 224456778999999998
Q ss_pred cCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC----CCCC
Q 037063 257 AWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG----SKDM 327 (588)
Q Consensus 257 ~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~----~~d~ 327 (588)
+.. ...++.+++++.+. +++++|++++++||||..++.++ | ++|+++|++||+|.+..- +...
T Consensus 147 ~~~~~~~~d~~~l~~~~~--------~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~ 218 (399)
T PRK07681 147 KKENDFLPDLELIPEEIA--------DKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKP 218 (399)
T ss_pred CCCCCCcCCHHHHHHhcc--------ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCC
Confidence 733 24578999988886 67999999999999999999555 5 778999999999998431 1101
Q ss_pred CC-CCCC-CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 328 DT-LGLS-LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 328 ~~-l~l~-~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
.. +.+. .....+++.|++|.||.+..++|+++.++++++.+....... ..++.
T Consensus 219 ~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~~~~-------------------------~~~~s 273 (399)
T PRK07681 219 ISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKSNT-------------------------DYGVF 273 (399)
T ss_pred CChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHHHHHHHhhc-------------------------ccCCC
Confidence 11 1111 112457888999999854455999999888877664322100 00111
Q ss_pred CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCC
Q 037063 406 SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNG 485 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g 485 (588)
.+.+ .++..+|+.-... +++..++.+...+++.+.|.++ ++++..| ..|..+-+.+.+ +
T Consensus 274 ~~~q----~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~p----~~g~f~~~~l~~--~ 332 (399)
T PRK07681 274 LPIQ----KAACAALRNGAAF-CEKNRGIYQERRDTLVDGFRTF----------GWNVDKP----AGSMFVWAEIPK--G 332 (399)
T ss_pred HHHH----HHHHHHHhCcHHH-HHHHHHHHHHHHHHHHHHHHHC----------CCcccCC----CeeeEEEEECCC--C
Confidence 1111 2222333221111 3445556666777788888763 2444333 123333334432 1
Q ss_pred CCcCHHHH-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 486 TRIDPALV-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 486 ~~i~~~~v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
++...+ ..+++++||.+++|..+. . .+.++||+|++ .+.++++++++.|++
T Consensus 333 --~~~~~~~~~l~~~~gv~v~pg~~f~----------------~--------~~~~~iRis~~--~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 333 --WTSLSFAYALMDRANVVVTPGHAFG----------------P--------HGEGFVRIALV--QDEEVLQQAVENIRN 384 (399)
T ss_pred --CCHHHHHHHHHHhCCEEEeCChhhC----------------c--------CCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 334444 555566999999885431 0 11238999998 478999999999876
No 132
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.85 E-value=7.8e-19 Score=188.13 Aligned_cols=299 Identities=14% Similarity=0.131 Sum_probs=189.1
Q ss_pred HHHHHHHHHHh-----CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 182 SKIRKRIMDFM-----NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 182 ~~~r~~ia~~l-----ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++|+.+++++ +++++ +|++|+|+++|+.+++.++ +++||+|++...++.+.. ..++..|++++.++.
T Consensus 69 ~~lr~~ia~~~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~ 141 (397)
T PRK07568 69 PELREAFAKYYKKWGIDVEPD--EILITNGGSEAILFAMMAI-CDPGDEILVPEPFYANYN----GFATSAGVKIVPVTT 141 (397)
T ss_pred HHHHHHHHHHHHHhCCCCCcc--eEEEcCChHHHHHHHHHHh-cCCCCEEEEecCCCccHH----HHHHHcCCEEEEeec
Confidence 47888888887 45555 4999999999999999998 899999776555444332 345678999999998
Q ss_pred cCCCCc--cCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCH---HHH-HHHHHcCcEEEEeCCCcC----CCC
Q 037063 257 AWPNLR--IHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSY---MWM-SVAAEKGWHVLLDATALG----SKD 326 (588)
Q Consensus 257 ~~~~~~--i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl---~~I-~~a~~~g~~vvvDaa~~~----~~d 326 (588)
+.+++. .+.++|+++++ +++++|++++++|+||..++. ++| ++|+++|+++++|.+... +..
T Consensus 142 ~~~~g~~~~~~~~l~~~~~--------~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 213 (397)
T PRK07568 142 KIEEGFHLPSKEEIEKLIT--------PKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLK 213 (397)
T ss_pred CcccCCCCCCHHHHHHhcC--------ccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCC
Confidence 633332 25688888887 679999999999999999985 556 889999999999998321 110
Q ss_pred CCC-CCCCC-CCCcEEEeccCccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCC
Q 037063 327 MDT-LGLSL-FKPDFLICSFYKIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP 403 (588)
Q Consensus 327 ~~~-l~l~~-~~~D~vv~S~~K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G 403 (588)
... +.+.. ...-+++.|++|.||.+..++|+++.. +++++.+...... ..+
T Consensus 214 ~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~--------------------------~~~ 267 (397)
T PRK07568 214 YTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQA--------------------------RLS 267 (397)
T ss_pred ccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhc--------------------------cCC
Confidence 111 12211 112377889999888545679999885 4555443211100 001
Q ss_pred CCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE-EEEeec
Q 037063 404 ESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL-AFNVFD 482 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv-~f~~~~ 482 (588)
++.+.+ .++..+|+..+.. ++++.++.+..++.+.+.|.++ +++.+..| .|+.. -+.++.
T Consensus 268 ~s~~~q----~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~p-----~g~~~~~~~l~~ 328 (397)
T PRK07568 268 PPTLEQ----IGAAALLDTPESY-FDEVREEYKKRRDILYEELNKI---------PGVVCEKP-----KGAFYIIAKLPV 328 (397)
T ss_pred CCcHHH----HHHHHHhhCCHHH-HHHHHHHHHHHHHHHHHHHhcC---------CCceecCC-----CcceEEEEecCC
Confidence 111111 2333444321111 4556666677777888888763 34554433 34443 344432
Q ss_pred CCCCCcCHHHHHH-HHHh-----CCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHH
Q 037063 483 WNGTRIDPALVQK-LADR-----HNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTY 556 (588)
Q Consensus 483 ~~g~~i~~~~v~~-~l~~-----~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~ 556 (588)
.+...+.+ ++++ .||.+.+|.... .. ...+..+||+|++. +.++++
T Consensus 329 -----~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~----------------~~-----~~~~~~~iRls~~~--~~~~~~ 380 (397)
T PRK07568 329 -----DDAEDFAKWLLTDFNYNGETVMVAPASGFY----------------AT-----PGLGKNEIRIAYVL--NEEDLK 380 (397)
T ss_pred -----CCHHHHHHHHHhhcccccceEEEeCchHhc----------------CC-----CCCCCCeEEEEEeC--CHHHHH
Confidence 13445544 4443 689998874321 00 00122389999873 579999
Q ss_pred HHHHHHHHhhhh
Q 037063 557 RLWAFVSRFLDA 568 (588)
Q Consensus 557 ~li~~l~~~l~~ 568 (588)
+.++.|.+++++
T Consensus 381 ~~~~~l~~~l~~ 392 (397)
T PRK07568 381 RAMEILKEALEK 392 (397)
T ss_pred HHHHHHHHHHHH
Confidence 999999988764
No 133
>PRK07683 aminotransferase A; Validated
Probab=99.85 E-value=7.7e-19 Score=187.60 Aligned_cols=300 Identities=16% Similarity=0.148 Sum_probs=194.5
Q ss_pred HHHHHHHHHHh----CC--CCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 182 SKIRKRIMDFM----NI--SEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 182 ~~~r~~ia~~l----ga--~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++|+.+++++ |+ +++ .+|++|+|+++|+.+++.++ +++||+|+++...+.+. ...++..|++++.++
T Consensus 68 ~~lr~~ia~~l~~~~g~~~~~~-~~I~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~~~ 141 (387)
T PRK07683 68 LELRKAACNFVKDKYDLHYSPE-SEIIVTIGASEAIDIAFRTI-LEPGTEVILPAPIYPGY----EPIIRLCGAKPVFID 141 (387)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHHHHHHHHHHh-CCCCCEEEEcCCCccch----HHHHHHcCCEEEEee
Confidence 36677777766 43 444 14999999999999999998 89999987665544322 334466799999999
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCCCcCC---CCCC
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDATALGS---KDMD 328 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa~~~~---~d~~ 328 (588)
.+..+..++.+++++.+. ++++++++++++|+||..++.+ +| ++|+++|+++|+|.+...- ....
T Consensus 142 ~~~~~~~~~~~~l~~~~~--------~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 213 (387)
T PRK07683 142 TRSTGFRLTAEALENAIT--------EKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHT 213 (387)
T ss_pred cCcccCCCCHHHHHHhcC--------cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcC
Confidence 874445678889998887 6789999999999999999854 45 8899999999999984321 0011
Q ss_pred CC-CC-CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 329 TL-GL-SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 329 ~l-~l-~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
++ .+ +...-.+++.|+.|.+|.+..++|++++.+++++.+...... . -.++..
T Consensus 214 ~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~~~~---~----------------------~~~~~~ 268 (387)
T PRK07683 214 SIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQY---N----------------------VTCASS 268 (387)
T ss_pred ChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHHHHHh---c----------------------cCCCCh
Confidence 11 11 111235888999999995456699999998877665432100 0 001111
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGT 486 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~ 486 (588)
+.+ .++...|+.-.. -++++.++.+..++++.+.|.++ ++.++.| .++.+.+......+
T Consensus 269 ~~q----~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~-----~~~~~~~~~~~~~~- 327 (387)
T PRK07683 269 ISQ----YAALEALTAGKD-DAKMMRHQYKKRRDYVYNRLISM----------GLDVEKP-----TGAFYLFPSIGHFT- 327 (387)
T ss_pred HHH----HHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHHHHc----------CCcccCC-----CeeEEEEEecccCC-
Confidence 111 122223321111 14556666777778888888763 2333332 34544443221101
Q ss_pred CcCHHHH-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 487 RIDPALV-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 487 ~i~~~~v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
++...+ .+++.++||.+++|..+. . .+.+++||+++. +.+++...++.|.++
T Consensus 328 -~~~~~~~~~ll~~~gI~v~pg~~f~----------------~--------~~~~~~Ri~~~~--~~~~~~~al~~l~~~ 380 (387)
T PRK07683 328 -MSSFDFALDLVEEAGLAVVPGSAFS----------------E--------YGEGYVRLSYAY--SIETLKEGLDRLEAF 380 (387)
T ss_pred -CCHHHHHHHHHHhCCEEEcCchhhC----------------C--------CCCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 334444 467788999999884331 0 112389999985 688999999999888
Q ss_pred hhh
Q 037063 566 LDA 568 (588)
Q Consensus 566 l~~ 568 (588)
++.
T Consensus 381 l~~ 383 (387)
T PRK07683 381 LQQ 383 (387)
T ss_pred HHh
Confidence 764
No 134
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.85 E-value=4e-19 Score=189.53 Aligned_cols=294 Identities=13% Similarity=0.046 Sum_probs=188.9
Q ss_pred HHHHHHHHHh----CCCCCC-ceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 183 KIRKRIMDFM----NISEDD-YTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~e-~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
++|+.|++++ |.+.+. ..|++|+|+++++.+++..+ +++||+|++....+... ...++..|++++.++.+
T Consensus 71 ~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~-~~~gd~vlv~~P~y~~~----~~~~~~~G~~v~~v~~~ 145 (383)
T TIGR03540 71 AYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAF-VNPGDIVLVPDPGYPVY----RIGTLFAGGEPYEMPLK 145 (383)
T ss_pred HHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHh-CCCCCEEEEeCCCCcch----HHHHHhcCCEEEEEecC
Confidence 4556666554 553222 24999999999999999999 89999977654433212 34456789999999986
Q ss_pred CC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCH---HHH-HHHHHcCcEEEEeCCCcC----C---C
Q 037063 258 WP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSY---MWM-SVAAEKGWHVLLDATALG----S---K 325 (588)
Q Consensus 258 ~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl---~~I-~~a~~~g~~vvvDaa~~~----~---~ 325 (588)
.+ ...++.+++++.+. +++++|++++++||||..+|. ++| ++|+++|+++|+|.+..- + .
T Consensus 146 ~~~g~~~d~~~l~~~~~--------~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~ 217 (383)
T TIGR03540 146 EENGFLPDFDAIPEDIA--------KKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAP 217 (383)
T ss_pred cccCCccCHHHHHhhcc--------ccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCc
Confidence 33 24578999988887 678999999999999999995 556 789999999999998531 1 1
Q ss_pred CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 326 DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 326 d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
.+..++ ......+++.|+.|.||.+..++|+++.++++++.+....... ..++.
T Consensus 218 ~~~~~~-~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~~~~-------------------------~~~~~ 271 (383)
T TIGR03540 218 SFLEVD-GAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKTNV-------------------------DSGVF 271 (383)
T ss_pred CcccCC-CcccCEEEEEecccccCCccceeeEEeCCHHHHHHHHHHHHhc-------------------------ccCCC
Confidence 111221 0112457788999999843344999999888776554321100 01111
Q ss_pred CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCC
Q 037063 406 SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNG 485 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g 485 (588)
.+.+ .++..+|+...+. ++.+.++.+..++.+.+.|+++ ++.++.|. .+..+.+.+++ +
T Consensus 272 ~~~q----~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~L~~~----------~~~~~~~~----~~~~~~~~l~~--~ 330 (383)
T TIGR03540 272 QAIQ----YAAIAALNGPQDV-VKEIRKIYQRRRDLLLEALKKI----------GIDVEKPK----ATFYVWVPVPE--G 330 (383)
T ss_pred hHHH----HHHHHHHhCCHHH-HHHHHHHHHHHHHHHHHHHHhC----------CCEecCCC----cceEEEEECCC--C
Confidence 1111 2223344322121 3555667777788888888873 35555441 23334444432 1
Q ss_pred CCcCHHHHH-HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 486 TRIDPALVQ-KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 486 ~~i~~~~v~-~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
++...+. ++++++||.+++|..+.. .+.++||+|++. +.+++.+.++.|++
T Consensus 331 --~~~~~~~~~ll~~~gi~v~~g~~f~~------------------------~~~~~~Ris~~~--~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 331 --YTSAEFAARLLEETGVVVTPGVGFGE------------------------YGEGYIRISLTV--PDERLEEAVARIKK 382 (383)
T ss_pred --CCHHHHHHHHHHHCCEEEecchhhCc------------------------cCCCeEEEEecC--CHHHHHHHHHHHhh
Confidence 4455555 456789999998855410 112389999973 56777777776654
No 135
>PRK03321 putative aminotransferase; Provisional
Probab=99.85 E-value=1.7e-19 Score=190.17 Aligned_cols=284 Identities=11% Similarity=0.065 Sum_probs=188.4
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
.+++|+.+++++++++++ |++|+|+++++.+++..+ +++||+|+++...+. .+ ...++..|++++.++.+ ++
T Consensus 59 ~~~lr~~ia~~~~~~~~~--I~~~~G~~~~l~~~~~~~-~~~gd~Vli~~p~y~-~~---~~~~~~~g~~~~~v~~~-~~ 130 (352)
T PRK03321 59 AVELRAALAEHLGVPPEH--VAVGCGSVALCQQLVQAT-AGPGDEVIFAWRSFE-AY---PILVQVAGATPVQVPLT-PD 130 (352)
T ss_pred HHHHHHHHHHHhCcCHHH--EEECCCHHHHHHHHHHHh-cCCCCEEEeCCCCHH-HH---HHHHHHcCCEEEEccCC-CC
Confidence 468999999999987655 999999999999999988 899999876543222 12 23456789999999987 46
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH--cCcEEEEeCCCcC--C--CCCCCCCC-
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE--KGWHVLLDATALG--S--KDMDTLGL- 332 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~--~g~~vvvDaa~~~--~--~d~~~l~l- 332 (588)
+.++++++++.++ +++++|++++++|+||..+|.++| ++|+. +|+++++|++... . .....+..
T Consensus 131 ~~~~~~~l~~~~~--------~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 202 (352)
T PRK03321 131 HTHDLDAMAAAIT--------DRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELV 202 (352)
T ss_pred CCCCHHHHHHhhc--------cCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHH
Confidence 7789999999887 678999999999999999999999 88887 5999999998421 1 00011111
Q ss_pred CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 333 SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 333 ~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
....--+++.|+.|.||.+..++|++++++++++.+...... + +.+....
T Consensus 203 ~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~--~--------------------------~~s~~~q-- 252 (352)
T PRK03321 203 RDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVAVP--F--------------------------SVNSLAQ-- 252 (352)
T ss_pred hhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhcCC--C--------------------------CCCHHHH--
Confidence 111123667799999984334599999988887766543211 0 1111111
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHH
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~ 492 (588)
.++..+|+....+ .+..++....++.+.+.|.++ ++.+. + ..|..+-+.+.. +...
T Consensus 253 -~~a~~~l~~~~~~--~~~~~~~~~~r~~~~~~L~~~----------~~~~~-~----~~g~~i~i~l~~------~~~~ 308 (352)
T PRK03321 253 -AAAIASLAAEDEL--LERVDAVVAERDRVRAALRAA----------GWTVP-P----SQANFVWLPLGE------RTAD 308 (352)
T ss_pred -HHHHHHhcCHHHH--HHHHHHHHHHHHHHHHHHHHC----------CCccC-C----CCCCEEEEeCCC------CHHH
Confidence 1222344322221 222222333345566777653 22221 1 235554444421 3566
Q ss_pred HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 493 VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 493 v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
+.+.|.++||.++. + +...||++++ +.+++++++++|++++.
T Consensus 309 ~~~~l~~~gI~v~~---~---------------------------~~~~iRi~~~---~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 309 FAAAAAEAGVVVRP---F---------------------------AGEGVRVTIG---APEENDAFLRAARAWRA 350 (352)
T ss_pred HHHHHHHCCEEEEc---c---------------------------CCCcEEEeeC---CHHHHHHHHHHHHHHhc
Confidence 77778889999864 1 1116999975 89999999999988754
No 136
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.85 E-value=2.2e-19 Score=202.76 Aligned_cols=327 Identities=14% Similarity=0.050 Sum_probs=214.9
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCH-HHHH---HHHHHhCCCC---CCC-eE-EEcCCCchhHHHHHHHHHHhcC
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQ-SSAF---KLLAESYPFY---SNP-RL-LTVYDHENEAAALMIESSKKRG 248 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~-T~al---~lv~~s~~~~---~gd-~l-l~~~e~~s~~~~~~~~~a~~~G 248 (588)
.+++.+..+.+++++|.+. +-+-+|+ +.|- -++++.+.-. +++ ++ +....|++|... +...|
T Consensus 542 lq~i~elq~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas-----a~~~G 612 (954)
T PRK12566 542 RAMIDELEAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS-----AQMAG 612 (954)
T ss_pred HHHHHHHHHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH-----HHHCC
Confidence 6788899999999999952 4555543 3333 2233333111 222 34 456778765432 45679
Q ss_pred CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCC
Q 037063 249 ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDM 327 (588)
Q Consensus 249 ~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~ 327 (588)
.+|+.++.+ ++|.+|.++|++++++ .++++.+|.++++++..+...|+++| ++||++|++|++|+++..+ .
T Consensus 613 ieVv~Vp~D-~~G~iDle~L~a~I~~-----~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a--~ 684 (954)
T PRK12566 613 MRVVIVECD-PDGNVDLDDLKAKAAA-----AGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNA--Q 684 (954)
T ss_pred CEEEEeccC-CCCCcCHHHHHHHhhc-----cCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhh--c
Confidence 999999998 7899999999999972 12578889999998888888889999 9999999999999998764 1
Q ss_pred CCCC-CCCCCCcEEEeccCccCCCCCCceEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 328 DTLG-LSLFKPDFLICSFYKIFGENPSGFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 328 ~~l~-l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
..+. ...+++|++++++||+||. |.|.|..++.. ...+.|.+...+..+ +.. +.+ +- +.|+.
T Consensus 685 ~~l~~Pg~~GADi~~~s~HKtf~~-P~G~GGP~vG~iav~~~L~pfLp~~P~-~d~----------~G~---~~-r~ga~ 748 (954)
T PRK12566 685 VGLARPADIGADVSHMNLHKTFCI-PHGGGGPGMGPIGVRAHLAPFVANHPV-VPV----------EGP---DP-NNGAV 748 (954)
T ss_pred cCCCChhhcCCCEEEecCCcccCc-CccCCCCccchhhhhhhhhhhccCCCC-cCC----------CCC---CC-CCCce
Confidence 2222 1344599999999998886 99999999888 666666665543201 100 000 00 22444
Q ss_pred CccchhhHHHHHHHHHHHHHhCHHHHHHHH--HHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCC--CcccEEEEEee
Q 037063 406 SISGVSSKLVECKGLDHADALGLILISNRA--RYLINWLANALMNLHHPHSETGIPLVRIYGPKVMF--DRGPSLAFNVF 481 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l~~~G~~~i~~r~--~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~--~rg~iv~f~~~ 481 (588)
+...+.....+..++.++..+|.+....+. ..+++|+.++|.+. . .+.. .+.... ....+..+.++
T Consensus 749 S~~~~gsa~~l~~A~~Yi~~lG~eLk~aa~~ailnAnYla~rL~~~--------~-~v~~-~~~~~~~~hEfii~~~~l~ 818 (954)
T PRK12566 749 SAAPWGSASILPISWMYIAMMGPQLADASEVAILSANYLANQLGGA--------F-PVLY-RGRNERVAHECILDLRPLK 818 (954)
T ss_pred eecccchHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHhHhh--------C-CCCc-CCCCCCeeeEEEEEccccc
Confidence 333332223356888999999977444444 56889999999762 1 1222 221100 11222222333
Q ss_pred cCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHH
Q 037063 482 DWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAF 561 (588)
Q Consensus 482 ~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~ 561 (588)
+..| ++..++.+.|.++||...+- .. .+.+.+||+++.+++.+|+|+|+++
T Consensus 819 ~~~g--~~~~dvakRL~d~Gihapt~-~f--------------------------Pv~~~LmIepTE~eskeEIDrf~eA 869 (954)
T PRK12566 819 AQTG--ISEEDVAKRLMDYGFHAPTM-SF--------------------------PVPGTLMVEPTESESKAELDRFVEA 869 (954)
T ss_pred cccC--CCHHHHHHHHHHCCcEEeEE-ee--------------------------ccCCEEEEEeeeeCCHHHHHHHHHH
Confidence 3222 55677877777999986541 10 1122899999999999999999999
Q ss_pred HHHhhhh-hhcccccc
Q 037063 562 VSRFLDA-DFVEKERW 576 (588)
Q Consensus 562 l~~~l~~-~~~~~~~~ 576 (588)
|.++.++ .-|+...|
T Consensus 870 L~~I~~e~~~v~~g~~ 885 (954)
T PRK12566 870 MLSIRAEIGKVQEGNW 885 (954)
T ss_pred HHHHHHHHHHHHcCCC
Confidence 9998766 34544444
No 137
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.85 E-value=7.2e-19 Score=192.89 Aligned_cols=349 Identities=13% Similarity=0.065 Sum_probs=213.4
Q ss_pred eeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHh
Q 037063 113 VCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFM 192 (588)
Q Consensus 113 vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~l 192 (588)
+-+|.++..++|..+++++.+.+.. ..... ..|+.. .-..++|+.|++++
T Consensus 79 ~i~~~~~~~~~P~~~~~~~~~~~~~-~~~~~---------------------------~~Y~~~--~G~~~LR~aia~~~ 128 (481)
T PTZ00377 79 LLEDPSVSSLFPADVVARAKEYLNA-IGGGT---------------------------GAYTDS--AGYPFVRKAVAAFI 128 (481)
T ss_pred hhcCccccccCCHHHHHHHHHHHHh-CCCcc---------------------------cCcCcc--cCCHHHHHHHHHHH
Confidence 3457778889999999887543321 10000 001111 11236777777776
Q ss_pred C------CCCCCceEEEecCHHHHHHHHHHhCCC-CCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCC-CCccC
Q 037063 193 N------ISEDDYTLVFTANQSSAFKLLAESYPF-YSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWP-NLRIH 264 (588)
Q Consensus 193 g------a~~~e~~vvft~g~T~al~lv~~s~~~-~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~-~~~i~ 264 (588)
+ ++++ +|++|+|+++|+.+++.++ + ++||+|++....+..+ ...++..|++++.++++.. ++.++
T Consensus 129 ~~~~g~~~~~~--~I~it~Ga~~al~~~~~~l-~~~~gD~Vlv~~P~y~~y----~~~~~~~g~~~v~v~~~~~~~~~~d 201 (481)
T PTZ00377 129 ERRDGVPKDPS--DIFLTDGASSGIKLLLQLL-IGDPSDGVMIPIPQYPLY----SAAITLLGGKQVPYYLDEEKGWSLD 201 (481)
T ss_pred HHhcCCCCChh--hEEEcCCHHHHHHHHHHHh-ccCCCCEEEECCCCchhH----HHHHHHcCCEEEEEEeccccCCCCC
Confidence 4 4444 4999999999999999998 6 7999988765544322 3455678999999998743 34689
Q ss_pred HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCH---HHH-HHHHHcCcEEEEeCCCcC----C-CCCCCC-----
Q 037063 265 SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSY---MWM-SVAAEKGWHVLLDATALG----S-KDMDTL----- 330 (588)
Q Consensus 265 ~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl---~~I-~~a~~~g~~vvvDaa~~~----~-~d~~~l----- 330 (588)
+++|+++++.. +....+++++++.+++||||..++. ++| ++|+++|++||+|.+-.- + ....++
T Consensus 202 ~~~l~~~l~~~--~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~ 279 (481)
T PTZ00377 202 QEELEEAYEQA--VRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLL 279 (481)
T ss_pred HHHHHHHHHHH--HhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHH
Confidence 99999998720 0111278999999999999999995 456 789999999999998321 1 001111
Q ss_pred CCCCC---C-CcEEEeccCc-cCCCCCCceEEEEE---eCcchhcccCCCCCCCceEeeecCCCcccccccccccccccC
Q 037063 331 GLSLF---K-PDFLICSFYK-IFGENPSGFGCLFV---KKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKF 402 (588)
Q Consensus 331 ~l~~~---~-~D~vv~S~~K-~~G~~P~G~G~L~v---~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~ 402 (588)
++... . .-+++.|+.| ++|++..++|++++ .+++++.+...... ..
T Consensus 280 ~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~--------------------------~~ 333 (481)
T PTZ00377 280 ELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASI--------------------------NL 333 (481)
T ss_pred hhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhhe--------------------------ec
Confidence 11110 0 1256779999 46754567999987 66666655432210 00
Q ss_pred CCCCccchhhHHHHHHHHH-----------HHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCC
Q 037063 403 PESSISGVSSKLVECKGLD-----------HADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFD 471 (588)
Q Consensus 403 GT~~~~~~~~~~al~~aL~-----------~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~ 471 (588)
++..+.+ .++..+|+ +... +.++.++.++.++.+.+.|.++ +++++..|
T Consensus 334 ~~~~~~Q----~a~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~rr~~l~~~L~~~---------~g~~~~~p----- 393 (481)
T PTZ00377 334 CSNVVGQ----LMTGLMCNPPREGDASYPLYKRE--RDAIFTSLKRRAELLTDELNKI---------EGVSCQPV----- 393 (481)
T ss_pred CCChHHH----HHHHHHhCCCCCCcccHHHHHHH--HHHHHHHHHHHHHHHHHHHhcC---------CCcEeecC-----
Confidence 1111111 22223332 1111 2344444566677778888763 56776654
Q ss_pred cccEEEE-EeecCCC-------CCc--CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccE
Q 037063 472 RGPSLAF-NVFDWNG-------TRI--DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSV 541 (588)
Q Consensus 472 rg~iv~f-~~~~~~g-------~~i--~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~ 541 (588)
.|+...| .+.-..+ ..+ +...+.++|.+.||.+.+|..... ..+..+
T Consensus 394 ~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~-----------------------~~~~~~ 450 (481)
T PTZ00377 394 EGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQ-----------------------KPGTYH 450 (481)
T ss_pred CeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCC-----------------------CCCCCE
Confidence 3555554 2321100 001 122356788899999998854310 012238
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHhhhhhhcc
Q 037063 542 VTAALGCLTNFEDTYRLWAFVSRFLDADFVE 572 (588)
Q Consensus 542 vRvSlg~~~t~eDv~~li~~l~~~l~~~~~~ 572 (588)
+|+|++ .+.|++++.++.|++++.+ |+.
T Consensus 451 ~Rls~~--~~~e~l~~~l~rl~~~~~~-~~~ 478 (481)
T PTZ00377 451 FRITIL--PPEEQIEEMVKKIKEFHES-FMK 478 (481)
T ss_pred EEEEEC--CCHHHHHHHHHHHHHHHHH-HHH
Confidence 999987 6788999999999998774 443
No 138
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.85 E-value=3.9e-19 Score=190.05 Aligned_cols=163 Identities=14% Similarity=0.047 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcC-CCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVY-DHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~-e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
...++++++++++.|.+ + .++++|++.|+..++.++ +++||+|++.. .|.. .+..+...++..|+++++++..
T Consensus 70 p~~~~le~~lA~l~g~~--~--al~~~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~~~~-t~~~~~~~~~~~G~~v~~vd~~ 143 (403)
T PRK07810 70 PTVSMFEERLRLIEGAE--A--CFATASGMSAVFTALGAL-LGAGDRLVAARSLFGS-CFVVCNEILPRWGVETVFVDGE 143 (403)
T ss_pred chHHHHHHHHHHHhCCC--c--EEEECChHHHHHHHHHHH-hCCCCEEEEccCCcch-HHHHHHHHHHHcCcEEEEECCC
Confidence 34678999999999974 3 888899999999998888 89999977554 4444 3333456677889999998753
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFK 336 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~ 336 (588)
|+++++++|+ ++|++|++.+++|++|.+.|+++| ++|+++|++|++|+++..|....++. .+
T Consensus 144 ------d~~~l~~ai~--------~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~~---~g 206 (403)
T PRK07810 144 ------DLSQWEEALS--------VPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRGLP---LG 206 (403)
T ss_pred ------CHHHHHHhcC--------cCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCChhh---cC
Confidence 7889999998 789999999999999999999999 99999999999999988773333332 34
Q ss_pred CcEEEeccCccCCCCCCc---eEEEEEeCcchh
Q 037063 337 PDFLICSFYKIFGENPSG---FGCLFVKKSSAS 366 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G---~G~L~v~~~~~~ 366 (588)
+|+++.|++|+++ +.| .|+++.+++.+.
T Consensus 207 aDivv~S~tK~l~--g~g~~~gG~v~~~~~~~~ 237 (403)
T PRK07810 207 ADVVVYSGTKHID--GQGRVLGGAILGDREYID 237 (403)
T ss_pred CcEEEccCCceec--CCcCceeEEEEeChHHHH
Confidence 8999999999887 445 587887776543
No 139
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.85 E-value=3.2e-19 Score=189.77 Aligned_cols=169 Identities=13% Similarity=0.089 Sum_probs=131.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCC-CchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYD-HENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e-~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+++++++++++|++ + +++++|+++|+.+++.++ +++||+|++... |.+ .+..+...++..|+++..++.
T Consensus 53 ~p~~~~le~~la~l~g~~--~--~~~~~sG~~Ai~~al~al-~~~Gd~Vl~~~~~~~~-t~~~~~~~~~~~g~~v~~v~~ 126 (380)
T TIGR01325 53 NPTVAAFEERIAALEGAE--R--AVATATGMSAIQAALMTL-LQAGDHVVASRSLFGS-TVGFISEILPRFGIEVSFVDP 126 (380)
T ss_pred CchHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEecCCcch-HHHHHHHHHHHhCCEEEEECC
Confidence 344678999999999983 2 788999999999999988 899999775444 433 344445667788999999876
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ ++++++++++ +++++|++.+++|++|...|+++| ++|+++|++|++|+++..+....++. .
T Consensus 127 ~------d~~~l~~~i~--------~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~pl~---~ 189 (380)
T TIGR01325 127 T------DLNAWEAAVK--------PNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQPLK---L 189 (380)
T ss_pred C------CHHHHHHhcC--------CCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCchh---h
Confidence 3 6788888887 689999999999999999999999 99999999999999976653223332 3
Q ss_pred CCcEEEeccCccCCCCCCce-EEEEEeCcchhccc
Q 037063 336 KPDFLICSFYKIFGENPSGF-GCLFVKKSSASVLS 369 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~-G~L~v~~~~~~~l~ 369 (588)
++|+++.|++|++|.+...+ |+++.+++.++.+.
T Consensus 190 g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~ 224 (380)
T TIGR01325 190 GADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVA 224 (380)
T ss_pred CCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHH
Confidence 48999999999887211123 67777777666554
No 140
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.85 E-value=2.1e-19 Score=192.33 Aligned_cols=166 Identities=13% Similarity=0.072 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
.-..+++++|+++.|.+ + +++++|+++|+.+++.++ +++||+|++. ..|.+ ....+...++..|+++++++..
T Consensus 64 p~~~~Le~~iA~~~g~~--~--~l~~~sG~~Ai~~al~~l-l~~Gd~Vl~~~~~y~~-~~~~~~~~~~~~G~~v~~vd~~ 137 (400)
T PRK06234 64 PTSTEVENKLALLEGGE--A--AVVAASGMGAISSSLWSA-LKAGDHVVASDTLYGC-TFALLNHGLTRYGVEVTFVDTS 137 (400)
T ss_pred ccHHHHHHHHHHHhCCC--c--EEEEcCHHHHHHHHHHHH-hCCCCEEEEecCccch-HHHHHHHHHhhCCeEEEEECCC
Confidence 34568999999999973 2 788899999999988888 8999997654 44544 3333345567789999998763
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc--CcEEEEeCCCcCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK--GWHVLLDATALGSKDMDTLGLSL 334 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~--g~~vvvDaa~~~~~d~~~l~l~~ 334 (588)
|+++++++++ ++|++|++.+++|+||.+.|+++| ++|+++ |++|++|++...+....+++
T Consensus 138 ------d~e~l~~~i~--------~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l~--- 200 (400)
T PRK06234 138 ------NLEEVRNALK--------ANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPLQ--- 200 (400)
T ss_pred ------CHHHHHHHhc--------cCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCchh---
Confidence 6889999997 689999999999999999999999 999997 99999999977763223332
Q ss_pred CCCcEEEeccCccCCCCCCc---eEEEEEeCcchhccc
Q 037063 335 FKPDFLICSFYKIFGENPSG---FGCLFVKKSSASVLS 369 (588)
Q Consensus 335 ~~~D~vv~S~~K~~G~~P~G---~G~L~v~~~~~~~l~ 369 (588)
.++|+++.|++|+++ ..| .|+++.++++++.++
T Consensus 201 ~g~Divv~S~sK~l~--g~g~~~gG~v~~~~~~~~~l~ 236 (400)
T PRK06234 201 LGADVVVHSATKYLN--GHGDVIAGFVVGKEEFINQVK 236 (400)
T ss_pred hCCcEEEeecccccc--CCCCceeEEEEecHHHHHHHH
Confidence 248999999999887 334 599999888776654
No 141
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.85 E-value=2e-19 Score=190.99 Aligned_cols=168 Identities=18% Similarity=0.149 Sum_probs=128.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....+++++.++++.|. ++ +++|+|+++|+.+++.++ +++||+|++....+...+..+..++...|+++..++.
T Consensus 50 ~p~~~~le~~lA~l~g~--~~--v~~~~gg~~Ai~~~l~al-l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~- 123 (382)
T TIGR02080 50 NPTRDLLQQALAELEGG--AG--AVVTNTGMSAIHLVTTAL-LGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ- 123 (382)
T ss_pred CchHHHHHHHHHHHhCC--Cc--EEEEcCHHHHHHHHHHHH-cCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC-
Confidence 34467899999999995 23 999999999999999999 9999997755443332343334555666788877642
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFK 336 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~ 336 (588)
.+.++++++++ +++++|++++++|+||...|+++| ++|+++|++|++|+++..+....++. ..
T Consensus 124 -----~d~~~l~~ai~--------~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl~---~g 187 (382)
T TIGR02080 124 -----GDEQALRAALA--------QKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNPLA---LG 187 (382)
T ss_pred -----CCHHHHHHhcC--------cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCchh---hC
Confidence 36788999887 679999999999999999999999 99999999999999987763223332 23
Q ss_pred CcEEEeccCccCCCCCCc--eEEEEEeC-cchhcc
Q 037063 337 PDFLICSFYKIFGENPSG--FGCLFVKK-SSASVL 368 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G--~G~L~v~~-~~~~~l 368 (588)
+|+++.|++|+++. +.| .|++++++ +.++++
T Consensus 188 aDivv~S~sK~l~G-~~~~~~G~i~~~~~~~~~~l 221 (382)
T TIGR02080 188 ADLVLHSCTKYLNG-HSDVIAGAVIAKDPQVAEEL 221 (382)
T ss_pred CCEEEeecceeccC-CCCceeEEEEeCCHHHHHHH
Confidence 89999999997762 444 67777754 444444
No 142
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=3.9e-19 Score=191.26 Aligned_cols=161 Identities=14% Similarity=0.134 Sum_probs=130.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+.+.+.|+++.|++ + .++++|+++|+.+++.++ +++||+|++. ..|+. .+..+...++..|+++++++.
T Consensus 63 ~p~~~~Le~~lA~leg~~--~--al~~~sG~~Ai~~al~~l-l~~GD~Vlv~~~~y~~-t~~~~~~~~~~~Gv~v~~vd~ 136 (431)
T PRK08248 63 NPTTDVFEKRIAALEGGI--G--ALAVSSGQAAITYSILNI-ASAGDEIVSSSSLYGG-TYNLFAHTLPKLGITVKFVDP 136 (431)
T ss_pred CchHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEccCchhh-HHHHHHHHHHhCCEEEEEECC
Confidence 344668999999999973 2 788999999999999888 8999997654 44544 344446677889999999976
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
. ++++++++|+ +++++|++.+++|+||.+.|+++| ++|+++|++||+|+++..|....++ .+
T Consensus 137 ~------d~e~l~~ai~--------~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl---~~ 199 (431)
T PRK08248 137 S------DPENFEAAIT--------DKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLLRPI---EH 199 (431)
T ss_pred C------CHHHHHHhcC--------CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccCChh---Hc
Confidence 3 7889999887 689999999999999999999999 9999999999999998776433333 34
Q ss_pred CCcEEEeccCccCCCCCCc--eEEEEEeCc
Q 037063 336 KPDFLICSFYKIFGENPSG--FGCLFVKKS 363 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~G~L~v~~~ 363 (588)
++|+++.|+||++| +.| +|.+++.+.
T Consensus 200 gaDivv~S~tK~lg--g~g~~~Gg~v~~~~ 227 (431)
T PRK08248 200 GADIVVHSATKFIG--GHGTSIGGVIVDSG 227 (431)
T ss_pred CCCEEEEcCccccC--CCCCceEEEEEeCC
Confidence 59999999999998 334 888887543
No 143
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=3e-19 Score=189.91 Aligned_cols=309 Identities=17% Similarity=0.123 Sum_probs=206.8
Q ss_pred hHHHHHHHHHHHHHhCCCCCC-ceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDD-YTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e-~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++.+.+.+.+.+..|.+-+. .+|+.|.|+++|+.+++.++ +.+||+|+++.++..++. ...+..|++++.+++
T Consensus 68 ~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~-~~pGDeVlip~P~Y~~y~----~~~~~~gg~~v~v~l 142 (393)
T COG0436 68 PELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLAL-LNPGDEVLIPDPGYPSYE----AAVKLAGGKPVPVPL 142 (393)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHh-cCCCCEEEEeCCCCcCHH----HHHHhcCCEEEEEeC
Confidence 345555555555555543222 34999999999999999999 999999776555544233 334557999999997
Q ss_pred cCC--CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCC--CcC--CC-
Q 037063 257 AWP--NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDAT--ALG--SK- 325 (588)
Q Consensus 257 ~~~--~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa--~~~--~~- 325 (588)
+.+ +..++.++|+++++ ++||+++++.++||||.+++-++ | ++|++||+++|.|.+ .+. +.
T Consensus 143 ~~~~~~f~~d~~~l~~~i~--------~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~ 214 (393)
T COG0436 143 DEEENGFKPDLEDLEAAIT--------PKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAE 214 (393)
T ss_pred CcCccCCcCCHHHHHhhcC--------ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCC
Confidence 532 67899999999998 79999999999999999999776 4 789999999999998 222 10
Q ss_pred CCCCCCCCCC-CCcEEEeccCccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCC
Q 037063 326 DMDTLGLSLF-KPDFLICSFYKIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP 403 (588)
Q Consensus 326 d~~~l~l~~~-~~D~vv~S~~K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G 403 (588)
....+.+... ..-+.+.|++|.+++..-++|++++. +++++.+...... . ..+
T Consensus 215 ~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~---~----------------------~~~ 269 (393)
T COG0436 215 HPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSY---L----------------------TSC 269 (393)
T ss_pred cCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHHHHHHHh---c----------------------ccC
Confidence 1111222211 12356679999888656679999999 6666554422100 0 122
Q ss_pred CCCccchhhHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeec
Q 037063 404 ESSISGVSSKLVECKGLDHADA-LGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFD 482 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL~~l~~-~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~ 482 (588)
.+.+.+ .+...||+.-+. --++...+..++.++.+++.|.++ +++.+..+ ..|+...|.-..
T Consensus 270 ~~~~~Q----~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~---------~g~~~~~~----p~Ga~Y~~~~i~ 332 (393)
T COG0436 270 APTPAQ----YAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEI---------GGLSVVKP----PEGAFYLFPKIP 332 (393)
T ss_pred CCHHHH----HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhc---------CCeeeccC----CCeeEEEEeecC
Confidence 333333 334466664321 114555567778888999999874 55766653 235666654322
Q ss_pred CCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHH
Q 037063 483 WNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 483 ~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l 562 (588)
.. .-+.+...++|++.||.+.+|..- .. ..|.+.||+|+.. ..++++..++.+
T Consensus 333 ~~--~d~~~f~~~Ll~~~gV~v~PG~~F----------------g~-------~~g~~~vRis~~~--~~~~l~~a~~rl 385 (393)
T COG0436 333 EL--LDSEEFAKKLLEEAGVAVVPGSGF----------------GE-------PPGEGYVRLSLAT--SEETLEEALRRL 385 (393)
T ss_pred CC--CCHHHHHHHHHHhCCEEEeccccc----------------CC-------CCCCCeEEEEEec--CHHHHHHHHHHH
Confidence 11 122345678999999999998421 11 0244599999764 559999999999
Q ss_pred HHhhhh
Q 037063 563 SRFLDA 568 (588)
Q Consensus 563 ~~~l~~ 568 (588)
.++++.
T Consensus 386 ~~~~~~ 391 (393)
T COG0436 386 ARFLAE 391 (393)
T ss_pred HHHHHh
Confidence 998764
No 144
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.85 E-value=3.4e-19 Score=173.16 Aligned_cols=384 Identities=14% Similarity=0.110 Sum_probs=265.7
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
++.+||=-.+-|++|+++.+.+..++... +.- .-| ++..+-.. + -..-+.+-..++
T Consensus 66 ~~~iYlcGNSLGLmPK~t~~~~~~eLDkW--ak~------------av~--gH~~GkvP-W-------~~~De~il~l~~ 121 (465)
T KOG3846|consen 66 KPVIYLCGNSLGLMPKSTRNSINAELDKW--AKC------------AVE--GHFKGKVP-W-------VSIDEPILPLLA 121 (465)
T ss_pred CCeEEEeccccccCchhhHhHHHHHHHHH--Hhh------------hhh--cccccccc-e-------eecchhhhhhhh
Confidence 67899999999999999988877666431 100 000 00000000 1 112246778889
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCe---EE-EcCCCchhHHHHHHHHHHhcCCEEE----EEeccCCCC
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPR---LL-TVYDHENEAAALMIESSKKRGARVS----SAEFAWPNL 261 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~---ll-~~~e~~s~~~~~~~~~a~~~G~~v~----~v~~~~~~~ 261 (588)
.+.|+.++| |....+-|..++.++-+| ++|..+ |+ -...++|..+ .+...++..|..+. .+.....+.
T Consensus 122 ~iVGA~e~E--vavmNsLTvNlh~Ll~sF-yKPTekR~KILlE~kaFPSDhY-AiesQ~~lhG~~~e~sm~~iePREGEe 197 (465)
T KOG3846|consen 122 PIVGAQENE--VAVMNSLTVNLHSLLISF-YKPTEKRFKILLEKKAFPSDHY-AIESQCKLHGISPENSMIQIEPREGEE 197 (465)
T ss_pred hhccCCchh--hhhHhhhhhHHHHHHHHh-cCCcchhhhhhhccCCCCchHH-HHHhhhhhcCCChHHheEEeccccccc
Confidence 999998776 999999999999999999 888654 54 3344555333 23455677776542 333332344
Q ss_pred ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEE
Q 037063 262 RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFL 340 (588)
Q Consensus 262 ~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~v 340 (588)
.+..+++...|.. ..+...+|+|+.++..||..+++..| ..-+..|++|-.|-|++++ -.++.|..|++||.
T Consensus 198 tlRteDILd~IEk-----ngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvg--NVpL~LHdWgVDFA 270 (465)
T KOG3846|consen 198 TLRTEDILDTIEK-----NGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVG--NVPLQLHDWGVDFA 270 (465)
T ss_pred chhHHHHHHHHHh-----cCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhc--CCceEEeecCCceE
Confidence 5778888888872 22568999999999999999999999 6666789999999999998 35677788889999
Q ss_pred EeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcc-cccccccccccccCCCCCccchhhHHHHHHH
Q 037063 341 ICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEI-IELETLDESSQSKFPESSISGVSSKLVECKG 419 (588)
Q Consensus 341 v~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~-~~~~~~~~~~f~e~GT~~~~~~~~~~al~~a 419 (588)
+-..||.+..++.|+|.++|..+......|...||.|--....+..++ ..+.+.. -.| +...|++... .++...
T Consensus 271 CWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa-~Gf-RiSNPpi~~v---~al~~S 345 (465)
T KOG3846|consen 271 CWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGA-LGF-RISNPPIIDV---VALRSS 345 (465)
T ss_pred EEeeecccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccc-ccc-ccCCCcHhHH---HHHHhh
Confidence 999999665558899999999988776666655531211000000011 1111111 145 5556776664 888999
Q ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCC--CCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHH
Q 037063 420 LDHADALGLILISNRARYLINWLANALMNLHHPHSET--GIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLA 497 (588)
Q Consensus 420 L~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~--g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l 497 (588)
|+..++..++++++|...|+.||..-++.....+.+- ..+.+.|+.|..-..||.-+++.+..+ ...|...|
T Consensus 346 Le~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp------~~~vfqeL 419 (465)
T KOG3846|consen 346 LELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSP------TPKVFQEL 419 (465)
T ss_pred HHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCC------chHHHHHH
Confidence 9999999999999999999998877776654322110 235678889877678888888776542 34566667
Q ss_pred HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec-CCCCCHHHHHHHHHHHHHhhhhh
Q 037063 498 DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL-GCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 498 ~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl-g~~~t~eDv~~li~~l~~~l~~~ 569 (588)
.++|+.... ....+||+.+ +.|||+.||++++.+|.+.+|..
T Consensus 420 ~krGv~~Dk------------------------------R~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 420 HKRGVIGDK------------------------------RRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKL 462 (465)
T ss_pred HHcCeeccc------------------------------cCCCceEeecchhhccHHHHHHHHHHHHHHHHHh
Confidence 777875321 1112899997 79999999999999999988763
No 145
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.85 E-value=1.1e-18 Score=201.69 Aligned_cols=322 Identities=14% Similarity=0.067 Sum_probs=209.9
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHH-----HHHHHHHHhCCCCCCC----eEE-EcCCCchhHHHHHHHHHHhc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQS-----SAFKLLAESYPFYSNP----RLL-TVYDHENEAAALMIESSKKR 247 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T-----~al~lv~~s~~~~~gd----~ll-~~~e~~s~~~~~~~~~a~~~ 247 (588)
.+++.++.+.+++++|.+ . +.++.|++ .++ ++++.+.+++|+ +|+ +...|.++. ..+...
T Consensus 541 l~~i~e~q~~l~eltG~d--~--~sl~~~~ga~ge~agL-~a~r~~~~~~G~~~r~~vlis~~aH~snp-----~sa~~~ 610 (954)
T PRK05367 541 RELIDQLEAWLAEITGYD--A--VSLQPNAGAQGEYAGL-LAIRAYHESRGEGHRDVCLIPSSAHGTNP-----ASAVMA 610 (954)
T ss_pred HHHHHHHHHHHHHHHCCC--C--EEECccHHHHHHHHHH-HHHHHHhhccCCCCCCEEEEEchhhhhhH-----HHHHHC
Confidence 688899999999999985 3 77888776 333 566666566776 344 566676532 234667
Q ss_pred CCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC-C
Q 037063 248 GARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS-K 325 (588)
Q Consensus 248 G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~-~ 325 (588)
|.+|+.++++ .++.+|.++|+++++. ...++.+|+++++++..+...|+++| ++||++|++++||+++..+ .
T Consensus 611 G~~vv~v~~d-~~G~iD~~~L~~~i~~-----~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~ 684 (954)
T PRK05367 611 GMKVVVVACD-ENGNIDLDDLRAKAEE-----HADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQV 684 (954)
T ss_pred CCEEEEECCC-CCCCcCHHHHHHHHhc-----cCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhcc
Confidence 9999999998 6789999999999972 01357778888888764445899999 9999999999999998643 1
Q ss_pred CCCCCCCCCCCCcEEEeccCccCCC----CCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccc-
Q 037063 326 DMDTLGLSLFKPDFLICSFYKIFGE----NPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS- 400 (588)
Q Consensus 326 d~~~l~l~~~~~D~vv~S~~K~~G~----~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~- 400 (588)
.+.. ...+++|++++|+||+||. ++.|+|++++++.+. +...|+ .+. .. .++
T Consensus 685 ~l~~--pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~----p~lpg~--~v~--~~-------------~~~~ 741 (954)
T PRK05367 685 GLAR--PGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLA----PFLPGH--PVQ--IA-------------GGET 741 (954)
T ss_pred CCCC--hhhcCCCEEEecCcccCCCCcCCCCCceEEEeeccccc----ccCCCC--ccC--cC-------------CCCC
Confidence 1111 1134499999999998763 244577999986543 333331 100 00 000
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHH---HHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE
Q 037063 401 KFPESSISGVSSKLVECKGLDHADALGLILISNRAR---YLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA 477 (588)
Q Consensus 401 e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~---~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~ 477 (588)
..|+.....+.....+..+..++..+|.+.+.++.+ .+++|+.++|.+. . .+...+|.....+..++.
T Consensus 742 ~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~--------~-~~~~~~~~~~~~~e~i~~ 812 (954)
T PRK05367 742 GIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH--------Y-PVLYTGANGRVAHECILD 812 (954)
T ss_pred CcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh--------c-CccccCCCCCcccceEEE
Confidence 123333222211134445777888888665555554 9999999999873 1 222233322222334555
Q ss_pred EE-eecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHH
Q 037063 478 FN-VFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTY 556 (588)
Q Consensus 478 f~-~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~ 556 (588)
+. +....| +...++.+.|.++||...+-.+ ...+.+||++..+++.+|+|
T Consensus 813 ~~~~~~~~g--~~~~di~krL~d~G~~~~t~~~---------------------------pv~~~l~i~ptE~~s~~elD 863 (954)
T PRK05367 813 LRPLKESTG--ITVDDIAKRLIDYGFHAPTMSF---------------------------PVAGTLMVEPTESESKAELD 863 (954)
T ss_pred eecccccCC--CCHHHHHHHHHHCCCeEeecCC---------------------------ccCCEEEEEeeecCCHHHHH
Confidence 53 222222 4567888888999998765211 11228999999999999999
Q ss_pred HHHHHHHHhhhhh-hcccccc
Q 037063 557 RLWAFVSRFLDAD-FVEKERW 576 (588)
Q Consensus 557 ~li~~l~~~l~~~-~~~~~~~ 576 (588)
+|+++|..+.++- -|+...|
T Consensus 864 r~~~al~~i~~e~~~~~~~~~ 884 (954)
T PRK05367 864 RFCDAMIAIRAEIDEVEAGEW 884 (954)
T ss_pred HHHHHHHHHHHHHHHhhcCCC
Confidence 9999999887643 3344344
No 146
>PRK07682 hypothetical protein; Validated
Probab=99.85 E-value=2.7e-19 Score=190.47 Aligned_cols=298 Identities=13% Similarity=0.165 Sum_probs=195.3
Q ss_pred HHHHHHHHHh----CC--CCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 183 KIRKRIMDFM----NI--SEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 183 ~~r~~ia~~l----ga--~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++|+.+++++ |. +++ .+|++|+|+++|+.+++.++ +++||+|++....+..+ ...++..|++++.++.
T Consensus 61 ~lr~~ia~~~~~~~g~~~~~~-~~i~~t~G~~~al~~~~~~l-~~~gd~vl~~~p~y~~~----~~~~~~~g~~~~~~~~ 134 (378)
T PRK07682 61 ELRQEIAKYLKKRFAVSYDPN-DEIIVTVGASQALDVAMRAI-INPGDEVLIVEPSFVSY----APLVTLAGGVPVPVAT 134 (378)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHHHHHHHHHHh-CCCCCEEEEeCCCchhh----HHHHHHcCCEEEEeec
Confidence 5666666665 44 333 24999999999999999999 89999977554433212 3455667999999987
Q ss_pred cC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCCCcCC-C-----
Q 037063 257 AW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDATALGS-K----- 325 (588)
Q Consensus 257 ~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa~~~~-~----- 325 (588)
+. .++.++.++|++++. +++++++++.++||||..+|.+ +| ++|+++++++|+|.+.... .
T Consensus 135 ~~~~~~~~d~~~l~~~~~--------~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 206 (378)
T PRK07682 135 TLENEFKVQPAQIEAAIT--------AKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYT 206 (378)
T ss_pred CCccCCCCCHHHHHhhcC--------cccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCC
Confidence 53 245789999999887 6789999999999999999854 46 7899999999999984321 0
Q ss_pred CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 326 DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 326 d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
.+..+. ......+++.|++|.||.+..++|++++++++++.+....... ..+++
T Consensus 207 ~~~~~~-~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~-------------------------~~~~~ 260 (378)
T PRK07682 207 SFASIK-GMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYS-------------------------MMCAP 260 (378)
T ss_pred Chhhcc-cccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhh-------------------------ccCCC
Confidence 011111 1112468899999999853344999999998887665322100 00111
Q ss_pred CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCC
Q 037063 406 SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNG 485 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g 485 (588)
.+.+ .++..+|+.-.. -++++.++.++.++++.+.|.++ ++++..| .++.+.+......+
T Consensus 261 ~~~q----~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~L~~~----------~~~~~~p-----~g~~~~~~~~~~~~ 320 (378)
T PRK07682 261 TMAQ----FAALEALRAGND-DVIRMRDSYRKRRNFFVTSFNEI----------GLTCHVP-----GGAFYAFPSISSTG 320 (378)
T ss_pred HHHH----HHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHHHHC----------CCccCCC-----CeeEEEEEeccCCC
Confidence 1111 222233332111 15667777788888889988874 2333333 34444443221111
Q ss_pred CCcCHHHHH-HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 486 TRIDPALVQ-KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 486 ~~i~~~~v~-~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
++...+. ++++++||.++.|..+.. .+.++||+|++. +.+++++.++.|++
T Consensus 321 --~~~~~~~~~ll~~~gv~v~pg~~f~~------------------------~~~~~iRis~~~--~~~~l~~~l~~l~~ 372 (378)
T PRK07682 321 --LSSEEFAEQLLLEEKVAVVPGSVFGE------------------------SGEGFIRCSYAT--SLEQLQEAMKRMKR 372 (378)
T ss_pred --CCHHHHHHHHHHhCCEEEcCchhhCc------------------------CCCCeEEEEeCC--CHHHHHHHHHHHHH
Confidence 3455555 455688999998854410 122399999884 68999999999998
Q ss_pred hhhh
Q 037063 565 FLDA 568 (588)
Q Consensus 565 ~l~~ 568 (588)
+++.
T Consensus 373 ~l~~ 376 (378)
T PRK07682 373 FVEN 376 (378)
T ss_pred HHhh
Confidence 8753
No 147
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=4.4e-19 Score=188.67 Aligned_cols=165 Identities=15% Similarity=0.079 Sum_probs=125.9
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcC-CCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVY-DHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~-e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
...++++++.+++++|.+ + +++++|+++|+.+++.++ +++||+|++.. .|.+ ...++.. ++..|+++..++.
T Consensus 52 np~~~~lE~~lA~l~g~~--~--~l~~~sG~~Ai~~~l~~l-l~~GD~Vlv~~~~y~~-~~~~~~~-~~~~g~~v~~~~~ 124 (385)
T PRK08574 52 NPTLRPLEEALAKLEGGV--D--ALAFNSGMAAISTLFFSL-LKAGDRVVLPMEAYGT-TLRLLKS-LEKFGVKVVLAYP 124 (385)
T ss_pred CccHHHHHHHHHHHhCCC--c--EEEeCCHHHHHHHHHHHH-hCCCCEEEEcCCCchh-HHHHHHH-hhccCcEEEEECC
Confidence 455678999999999973 2 667788899999999988 89999976544 4444 4444333 3667888887643
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCC-cceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKK-KRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSL 334 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~-~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~ 334 (588)
+.++++++++ + ++++|++++++|+||...|+++| ++|+++|++|++|+++..|....++.
T Consensus 125 -------d~~~l~~~i~--------~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~--- 186 (385)
T PRK08574 125 -------STEDIIEAIK--------EGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPLR--- 186 (385)
T ss_pred -------CHHHHHHhcC--------ccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChhh---
Confidence 4688988887 5 89999999999999999999999 99999999999999988774333332
Q ss_pred CCCcEEEeccCccCCCCCCc--eEEEEEe-Ccchhcc
Q 037063 335 FKPDFLICSFYKIFGENPSG--FGCLFVK-KSSASVL 368 (588)
Q Consensus 335 ~~~D~vv~S~~K~~G~~P~G--~G~L~v~-~~~~~~l 368 (588)
.++|+++.|++|+++. |.+ .|+++++ +++.+++
T Consensus 187 ~GaDivv~S~sK~l~g-~~d~~gG~vi~~~~~~~~~~ 222 (385)
T PRK08574 187 HGADFVVHSLTKYIAG-HNDVVGGVAVAWSGEFLEEL 222 (385)
T ss_pred hCCcEEEeeCceeecC-CCCceeEEEEECcHHHHHHH
Confidence 3489999999998862 433 3645654 4444444
No 148
>PLN02590 probable tyrosine decarboxylase
Probab=99.84 E-value=7e-18 Score=184.41 Aligned_cols=397 Identities=10% Similarity=0.049 Sum_probs=243.2
Q ss_pred HHHhCCCCCCc--hhHHHHHhhhccCCCC-CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCccc
Q 037063 83 FTKVFPQYLQT--DQADRIRAQDYFHLSL-NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFD 159 (588)
Q Consensus 83 f~~~~p~y~~~--~~~~~iR~~~f~~l~~-~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~ 159 (588)
|....|+-++. ..++.+++.-.|.... ..--|+.|--++..+.+++-.+..... |++. ..|.
T Consensus 99 l~~~~P~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~sa~-----n~~~-----~~~~----- 163 (539)
T PLN02590 99 LPDSAPERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGL-----SVVG-----FTWL----- 163 (539)
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHHHhc-----cccc-----CCcc-----
Confidence 33344555542 3566666543444321 345688888888888888776543321 1100 0111
Q ss_pred ccccccccccccccCCchhHHHHHHHHHHHHHhCCCCC-----CceEEEecCHHHHHHHHHHhCC---CC----CC-Ce-
Q 037063 160 ICYRSVNLNSWLQYGSEESELESKIRKRIMDFMNISED-----DYTLVFTANQSSAFKLLAESYP---FY----SN-PR- 225 (588)
Q Consensus 160 ~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~lga~~~-----e~~vvft~g~T~al~lv~~s~~---~~----~g-d~- 225 (588)
.++ ...+++.++-+++++++|.++. ...-+||+|+|+|+-.++.+.. .+ .+ .+
T Consensus 164 -----~sP--------a~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~ 230 (539)
T PLN02590 164 -----TSP--------AATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQL 230 (539)
T ss_pred -----cCc--------hhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCE
Confidence 011 1278999999999999999752 1348899999998644332211 11 11 12
Q ss_pred EE-EcCCCchhHHHHHHHHHHhcCC---EEEEEeccC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccC
Q 037063 226 LL-TVYDHENEAAALMIESSKKRGA---RVSSAEFAW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARY 300 (588)
Q Consensus 226 ll-~~~e~~s~~~~~~~~~a~~~G~---~v~~v~~~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~ 300 (588)
++ +...-|+ ++ .+.|+-.|. .++.||++. +++++|+++|+++|.++ +.....+-+|+.+..++.||.+-
T Consensus 231 vvy~S~~aH~-Sv---~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d--~~~g~~P~~VvaTaGTT~tGaiD 304 (539)
T PLN02590 231 VVYGSDQTHS-SF---RKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHD--LAKGFIPFFICATVGTTSSAAVD 304 (539)
T ss_pred EEEecCCchH-HH---HHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHH--HhcCCCcEEEEEEeCCCCCcccC
Confidence 33 3333333 23 456666776 588999874 35789999999999732 22234578899999999999999
Q ss_pred CHHHH-HHHHHcCcEEEEeCCCcCC----CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcc--hhccc--CC
Q 037063 301 SYMWM-SVAAEKGWHVLLDATALGS----KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSS--ASVLS--GS 371 (588)
Q Consensus 301 pl~~I-~~a~~~g~~vvvDaa~~~~----~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~--~~~l~--~~ 371 (588)
|+++| ++|+++|++++||||-... .....+.....++|.+++++|||++. |.++|++++|+.. .+.+. +.
T Consensus 305 pl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~-p~~cg~llvr~~~~l~~a~~~~~~ 383 (539)
T PLN02590 305 PLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFA-NQTCSPLWVKDRYSLIDALKTNPE 383 (539)
T ss_pred CHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCc-CcCEEEEEecCHHHHHHHhhcCHH
Confidence 99999 9999999999999984332 11122222234589999999999887 9999999999852 12221 11
Q ss_pred CCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccC
Q 037063 372 TSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHH 451 (588)
Q Consensus 372 ~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h 451 (588)
+.. ...+......+..++.. +.| ..+-+ ..+..+|+.+-..|+.++.++..+|++++.+.|++
T Consensus 384 YL~--~~~~~~~~~~d~~d~~i-------~ls-Rr~ra----LklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~--- 446 (539)
T PLN02590 384 YLE--FKVSKKDTVVNYKDWQI-------SLS-RRFRS----LKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQ--- 446 (539)
T ss_pred HhC--CcccccccCCCccccCC-------CCC-CchHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 110 00000000000000100 111 11222 23446666666667888889999999999999988
Q ss_pred CCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCH----HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHh
Q 037063 452 PHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDP----ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLE 527 (588)
Q Consensus 452 ~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~----~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~ 527 (588)
.+.++++.| ..-++|+|.+.......... ..+.+.+.+.|...-+...
T Consensus 447 ------~~~fel~~~----~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~------------------ 498 (539)
T PLN02590 447 ------DPSFEVVTT----RYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTA------------------ 498 (539)
T ss_pred ------CCCeEEecC----CceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeE------------------
Confidence 377999886 34689999986421110001 1233334444544322211
Q ss_pred hhcCCCCCcCCccEEEEec-CCCCCHHHHHHHHHHHHHhhh
Q 037063 528 TRSGTNETRSGVSVVTAAL-GCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 528 ~~~~~~~~~~g~~~vRvSl-g~~~t~eDv~~li~~l~~~l~ 567 (588)
..|..++|+++ .+.++.+||+.+|+.|.+..+
T Consensus 499 --------~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~ 531 (539)
T PLN02590 499 --------LSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHAS 531 (539)
T ss_pred --------ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 14555999998 588999999999999988643
No 149
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.84 E-value=5.9e-19 Score=188.93 Aligned_cols=294 Identities=14% Similarity=0.089 Sum_probs=189.6
Q ss_pred HHHHHHHHHh----CCCCCCc-eEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 183 KIRKRIMDFM----NISEDDY-TLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~e~-~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
++|+.|++++ |.+-+.. .|++|+|+++|+.+++.++ +++||+|++....+... ...++..|++++.++++
T Consensus 77 ~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~-~~~gd~Vlv~~P~y~~~----~~~~~~~g~~~~~v~~~ 151 (394)
T PRK05942 77 SFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAY-VNPGDVVLVPSPAYPAH----FRGPLIAGAQIYPIILK 151 (394)
T ss_pred HHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHh-CCCCCEEEEcCCCCcch----HHHHHHcCCEEEEeecC
Confidence 5666666665 5432222 4889999999999999999 89999976544433212 23345679999999987
Q ss_pred CC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCCCcC----CCCCC
Q 037063 258 WP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDATALG----SKDMD 328 (588)
Q Consensus 258 ~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa~~~----~~d~~ 328 (588)
.. ++.++.+++++.+. ++++++++++++||||..++.+ +| ++|+++|++||+|.+..- +....
T Consensus 152 ~~~~~~~d~~~l~~~~~--------~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~ 223 (394)
T PRK05942 152 PENDWLIDLSSIPEEVA--------QQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPT 223 (394)
T ss_pred CccCCccCHHHHHHhcc--------ccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCC
Confidence 32 34689999998887 6899999999999999999954 56 789999999999998321 10011
Q ss_pred CC-CCCC-CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 329 TL-GLSL-FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 329 ~l-~l~~-~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
.+ .+.. ....+++.||.|.||.++.++|++++++++++.+....... ..++..
T Consensus 224 ~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~~~~~-------------------------~~~~~~ 278 (394)
T PRK05942 224 SLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTLKTNL-------------------------DYGIFS 278 (394)
T ss_pred ChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHHHHHHhhc-------------------------ccCCCH
Confidence 11 1111 12357788999999854456999999988877665432110 001111
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE-EEEEeecCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS-LAFNVFDWNG 485 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i-v~f~~~~~~g 485 (588)
+.+ .++..+|+...+ .++++.++.++..+++.+.|.++ ++.++.| .+++ +-+.++. +
T Consensus 279 ~~q----~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~L~~~----------~~~~~~~-----~~~~f~~~~~~~--~ 336 (394)
T PRK05942 279 ALQ----KAAETALQLPDS-YLQQVQERYRTRRDFLIQGLGEL----------GWNIPPT-----KATMYLWVPCPV--G 336 (394)
T ss_pred HHH----HHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHHHC----------CCeecCC-----CeeeEEEEECCC--C
Confidence 111 233455554333 25677788888888888888764 2444433 3453 3344432 1
Q ss_pred CCcCHHH-HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 486 TRIDPAL-VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 486 ~~i~~~~-v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
++... +.+++.++||.+..|.... . .+.++||++++ ++.+++.+.|++
T Consensus 337 --~~~~~~~~~~l~~~gV~v~~g~~f~----------------~--------~~~~~iRis~~-----~~~~~l~~~l~~ 385 (394)
T PRK05942 337 --MGSTDFALNVLQKTGVVVTPGNAFG----------------E--------GGEGYVRISLI-----ADCDRLGEALDR 385 (394)
T ss_pred --CCHHHHHHHHHHHCCEEEeCChhhC----------------c--------CCCCeEEEEec-----CCHHHHHHHHHH
Confidence 33444 4567888999998873220 0 12239999996 245667777666
Q ss_pred hhh
Q 037063 565 FLD 567 (588)
Q Consensus 565 ~l~ 567 (588)
+.+
T Consensus 386 l~~ 388 (394)
T PRK05942 386 LKQ 388 (394)
T ss_pred HHH
Confidence 543
No 150
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.84 E-value=6.8e-19 Score=184.19 Aligned_cols=289 Identities=16% Similarity=0.161 Sum_probs=210.2
Q ss_pred HHHHHHHHHHHhC-CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCC
Q 037063 181 ESKIRKRIMDFMN-ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWP 259 (588)
Q Consensus 181 ~~~~r~~ia~~lg-a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~ 259 (588)
..++++.++++++ .+++. |+.+.|+++.|.++++.+ ..+||++++....++ .+ ...++..|++++.++.+ +
T Consensus 59 ~~~l~~a~a~~~~~~~~~~--V~~gnGsde~i~~l~~~~-~~~gd~vl~~~Ptf~-~Y---~~~a~~~g~~~~~v~~~-~ 130 (356)
T COG0079 59 YRELRAALAEYYGVVDPEN--VLVGNGSDELIELLVRAF-VEPGDTVLIPEPTFS-MY---EIAAQLAGAEVVKVPLK-E 130 (356)
T ss_pred HHHHHHHHHHHhCCCCcce--EEEcCChHHHHHHHHHHh-hcCCCEEEEcCCChH-HH---HHHHHhcCCeEEEeccc-c
Confidence 4589999999999 66554 999999999999999999 899999876655544 23 34567789999999997 4
Q ss_pred CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc--CcEEEEeCC--CcCCCCCCCCCCCC
Q 037063 260 NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK--GWHVLLDAT--ALGSKDMDTLGLSL 334 (588)
Q Consensus 260 ~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~--g~~vvvDaa--~~~~~d~~~l~l~~ 334 (588)
..+|.+.+.+.+. +++++|.+++++||||..++.++| +++... +.+||||.| .+.+ ...+.+-.
T Consensus 131 -~~~d~~~~~~~~~--------~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~--~~~~~l~~ 199 (356)
T COG0079 131 -FRLDLDAILAAIR--------DKTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSP--ESSLELLK 199 (356)
T ss_pred -cccCHHHHHHhhh--------cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCC--chhhhhcc
Confidence 8899999999998 689999999999999999999999 666543 889999998 5555 22222222
Q ss_pred CCC-cEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhH
Q 037063 335 FKP-DFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSK 413 (588)
Q Consensus 335 ~~~-D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~ 413 (588)
.+. =+++-||.|.||.+..++|+++.++++++.|......+ . .+.++ .
T Consensus 200 ~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~p~--~--------------------------v~~~a---~ 248 (356)
T COG0079 200 YPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRPPF--N--------------------------VSSPA---L 248 (356)
T ss_pred CCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcCCC--C--------------------------CCHHH---H
Confidence 223 36777999999987778999999999988776544221 0 11111 1
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHH
Q 037063 414 LVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALV 493 (588)
Q Consensus 414 ~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v 493 (588)
++..++|+.-+. ++...+++...+.++.+.|+++ +...++. ..++.+.+.+.+ + - ...+
T Consensus 249 ~aa~aal~~~~~--~~~~~~~~~~~r~rl~~~l~~~---------~~~~v~p-----S~aNFvlv~~~~--~--~-~~~l 307 (356)
T COG0079 249 AAAIAALRDADY--LEESVERIREERERLYAALKAL---------GLFGVFP-----SQANFVLVRVPD--A--E-AAAL 307 (356)
T ss_pred HHHHHHcccHHH--HHHHHHHHHHHHHHHHHHHHhC---------CCCeecC-----CCCcEEEEECCC--c--c-HHHH
Confidence 233344443332 5777888888999999999986 2122432 235666666554 1 2 4567
Q ss_pred HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 494 QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 494 ~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.+.|.++||.+|.... . + .+..++|||+| |.|+.++|+++|++++..
T Consensus 308 ~~~L~~~giivR~~~~-~-~-----------------------~~~~~lRitvg---t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 308 AEALLKKGILVRDCSS-V-G-----------------------LLPGYLRITVG---TPEENDRLLAALREVLKG 354 (356)
T ss_pred HHHHHHCCEEEEeCCC-C-C-----------------------CCCCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 8888888999995311 0 0 11229999999 889999999999998764
No 151
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=1.7e-18 Score=183.95 Aligned_cols=286 Identities=16% Similarity=0.184 Sum_probs=190.4
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCc
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLR 262 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~ 262 (588)
++|+.|++++|+++++ |++|+|+++++.+++.++ +++||+|++....+. .....++..|++++.++.+ +++.
T Consensus 75 ~lr~~ia~~~~~~~~~--i~~t~G~~~~l~~~~~~~-~~~gd~vli~~P~y~----~~~~~~~~~g~~~~~v~~~-~~~~ 146 (371)
T PRK05166 75 ALREAIAARTGVPADR--IILGNGSEDLIAVICRAV-LRPGDRVVTLYPSFP----LHEDYPTMMGARVERVTVT-PDLG 146 (371)
T ss_pred HHHHHHHHHhCcCHHH--EEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCChH----HHHHHHHHcCCeEEEeecC-CCCC
Confidence 7999999999997665 999999999999999998 899999775543322 2245667789999999987 5678
Q ss_pred cCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH--cCcEEEEeCCCc--CC-CC-CCCCC-CC-
Q 037063 263 IHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE--KGWHVLLDATAL--GS-KD-MDTLG-LS- 333 (588)
Q Consensus 263 i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~--~g~~vvvDaa~~--~~-~d-~~~l~-l~- 333 (588)
++.+++++.++ +++++|++++++||||..+|.+++ ++++. .++++|+|.+.. .. .+ ...+. +.
T Consensus 147 ~~~~~l~~~~~--------~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 218 (371)
T PRK05166 147 FDLDALCAAVA--------RAPRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKA 218 (371)
T ss_pred CCHHHHHHhhh--------cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhh
Confidence 99999999887 678999999999999999999988 66654 478999999832 21 00 01111 11
Q ss_pred CCCCcEEEeccCccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 334 LFKPDFLICSFYKIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 334 ~~~~D~vv~S~~K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
....-+++.||.|.||.+..++|++++. +++++.+...... . ++..+.+
T Consensus 219 ~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~~--~-------------------------~~~~~~q--- 268 (371)
T PRK05166 219 RGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRTP--F-------------------------NVNGAAQ--- 268 (371)
T ss_pred cCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhccC--C-------------------------CCCHHHH---
Confidence 1112478899999998545669998874 4555544322111 0 0111111
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHH
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~ 492 (588)
.++..++..- .. +++..+..+..++++.+.|++. ++++. | ..|..+-+.+. .+...
T Consensus 269 -~~~~~~l~~~-~~-~~~~~~~~~~~r~~l~~~L~~~----------g~~~~-p----~~g~fl~~~~~------~~~~~ 324 (371)
T PRK05166 269 -AAALAALDDE-EH-LAKGVALALAERERLKKELAEM----------GYRIA-P----SRANFLFFDAR------RPASA 324 (371)
T ss_pred -HHHHHHhcCH-HH-HHHHHHHHHHHHHHHHHHHHHC----------cCeeC-C----CcCCEEEEeCC------CCHHH
Confidence 1222333211 11 4555566666677788888873 23332 2 23444444432 23456
Q ss_pred HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 493 VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 493 v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
+.+.|.++||.++.|... ...++||++++ +.++.++|++.|++++.
T Consensus 325 l~~~l~~~gi~v~p~~~~--------------------------~~~~~iRi~~~---~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 325 VAEALLRQGVIVKPWKQP--------------------------GFETFIRVSIG---SPEENDHFVAALDKVLE 370 (371)
T ss_pred HHHHHHHCCeEEecCCCC--------------------------CCCCeEEEEcC---CHHHHHHHHHHHHHHhh
Confidence 667776789999886310 11238999988 67889999999988653
No 152
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=8.6e-19 Score=185.61 Aligned_cols=290 Identities=13% Similarity=0.103 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCC-CeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccC-
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSN-PRLLTVYDHENEAAALMIESSKKRGARVSSAEFAW- 258 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~g-d~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~- 258 (588)
..++|+.|++++|+++++ |++|+|+++++.+++.++ ..+| ++|++....++ .....++..|++++.++.+.
T Consensus 61 ~~~lr~~ia~~~~~~~~~--I~~t~G~~~~l~~~~~~~-~~~g~~~vlv~~p~y~----~~~~~~~~~g~~~~~v~~~~~ 133 (364)
T PRK04781 61 PPGLRSALAALYGCAPEQ--LLIGRGSDEAIDLLVRAL-CVPGRDAVLVTPPVFG----MYAVCARLQNAPLVEVPLVDG 133 (364)
T ss_pred HHHHHHHHHHHhCcChHH--EEEeCCHHHHHHHHHHHh-cCCCCCeEEEcCCChH----HHHHHHHHcCCEEEEEecCCC
Confidence 368999999999998765 999999999999999998 7888 67776555443 22345577899999999842
Q ss_pred CC-CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH--cCcEEEEeCCC--cCCCCCCCCCC
Q 037063 259 PN-LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE--KGWHVLLDATA--LGSKDMDTLGL 332 (588)
Q Consensus 259 ~~-~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~--~g~~vvvDaa~--~~~~d~~~l~l 332 (588)
.+ ..++.+++.+.+.. +++++|++++++||||..+|.+++ ++++. ++++||+|.+- +.. +...+.+
T Consensus 134 ~~~~~~d~~~l~~~~~~-------~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~-~~~~~~~ 205 (364)
T PRK04781 134 ADGFHADVPAIVAAALA-------SNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSD-VPSAVGL 205 (364)
T ss_pred ccCCCcCHHHHHHHHhc-------cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcC-CcchHHH
Confidence 22 34688887655431 679999999999999999999998 76654 47899999983 221 0111111
Q ss_pred -CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchh
Q 037063 333 -SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVS 411 (588)
Q Consensus 333 -~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~ 411 (588)
.....-+++.||.|.||.+..++|+++.++++++.+....... + .+ .+
T Consensus 206 ~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~-~---------------------------~~--~~- 254 (364)
T PRK04781 206 LARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPY-P---------------------------VP--TP- 254 (364)
T ss_pred HhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccCCC-C---------------------------CC--HH-
Confidence 1122347788999999964567999999988887665433110 0 00 00
Q ss_pred hHHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCc
Q 037063 412 SKLVECKGLDHADALG---LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 412 ~~~al~~aL~~l~~~G---~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i 488 (588)
+...++..+..-. ..+..++.++.++.+.+.|+++ +++..+.| ..|..+-+.+.+
T Consensus 255 ---~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---------~~~~~~~p----~~g~f~~~~~~~------ 312 (364)
T PRK04781 255 ---CAALAEQALSAPALAVTARRVAEVRAERERLHAALAQL---------PGVRRVYP----SQGNFLLVRFDD------ 312 (364)
T ss_pred ---HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC---------CCCCeECC----CCCcEEEEEcCC------
Confidence 1112222222211 1223334556667788888764 34422223 235555555432
Q ss_pred CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 489 DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 489 ~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
...+.+.+.++||.|+.|.... ....+|||+++ +.++.++|+++|+++..
T Consensus 313 -~~~~~~~l~~~gI~v~~~~~~~-------------------------~~~~~~Ris~~---~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 313 -AEAAFQALLAAGVVVRDQRAAP-------------------------RLSDALRITLG---TPEQNDRVLAALQRTQA 362 (364)
T ss_pred -HHHHHHHHHHCCeEEeeCCCCC-------------------------CCCCeEEEeCC---CHHHHHHHHHHHHHHHh
Confidence 4667778889999999873210 01128999988 68999999999988643
No 153
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.84 E-value=6.4e-19 Score=188.07 Aligned_cols=294 Identities=12% Similarity=0.042 Sum_probs=187.8
Q ss_pred HHHHHHHHHh----CCCCCCc-eEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 183 KIRKRIMDFM----NISEDDY-TLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~e~-~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
++|+.|++++ |.+.+.. .|++|+|+++|+.+++..+ +++||+|++....+. +....++..|++++.++.+
T Consensus 73 ~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~-~~~gd~Vl~~~P~y~----~~~~~~~~~g~~~~~v~~~ 147 (385)
T PRK09276 73 EFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAF-VNPGDVVLVPDPGYP----VYKIGTIFAGGEPYFMPLK 147 (385)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHh-CCCCCEEEEcCCCCc----ChHHHHHHcCCEEEEEecC
Confidence 5666666665 5432222 4999999999999999999 899999776544332 1234556789999999986
Q ss_pred CC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC----CCCCC
Q 037063 258 WP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG----SKDMD 328 (588)
Q Consensus 258 ~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~----~~d~~ 328 (588)
.+ ...++++++++.+. +++++|++++++||||..+|.++ | ++|+++|++||+|.+..- +....
T Consensus 148 ~~~g~~~d~~~l~~~~~--------~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~ 219 (385)
T PRK09276 148 EENGFLPDLDAIPEDVA--------KKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPP 219 (385)
T ss_pred CCCCCcCCHHHHHHhcc--------ccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCC
Confidence 33 34578899988876 67899999999999999999754 5 778999999999998432 10011
Q ss_pred CC-CCCC-CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 329 TL-GLSL-FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 329 ~l-~l~~-~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
.+ .+.. ....+++.|+.|.||.+..++|+++.++++++.+...... . ..+...
T Consensus 220 ~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~~~~~~~~----~---------------------~~~~~~ 274 (385)
T PRK09276 220 SFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLGKVKSN----V---------------------DSGVFQ 274 (385)
T ss_pred ChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHHHHHHHHHHhh----c---------------------cCCCCH
Confidence 11 1111 1245788999999984334499999988887766432210 0 000111
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE-EEEEeecCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS-LAFNVFDWNG 485 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i-v~f~~~~~~g 485 (588)
..+ .++..+|+..... ++++.++.+..++++.+.|+++ +++++.| .+++ +.+.+.+ +
T Consensus 275 ~~q----~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~----------~~~~~~~-----~~~~~~~v~~~~--~ 332 (385)
T PRK09276 275 AIQ----EAGIAALNGPQEV-VEELRKIYQERRDILVEGLRKL----------GLEVEPP-----KATFYVWAPVPK--G 332 (385)
T ss_pred HHH----HHHHHHHcCcHHH-HHHHHHHHHHHHHHHHHHHHhC----------CCcccCC-----CcceEEEEECCC--C
Confidence 111 2223344321121 4666777777788888888874 3444443 2343 3344432 1
Q ss_pred CCcCHHHHH-HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 486 TRIDPALVQ-KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 486 ~~i~~~~v~-~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
++...+. ++++++||.++.|..+.. .+.++||+|++. +.+++...++.|.+
T Consensus 333 --~~~~~l~~~ll~~~gi~v~~g~~f~~------------------------~~~~~~Ris~~~--~~~~l~~~l~~l~~ 384 (385)
T PRK09276 333 --YTSAEFATLLLDKAGVVVTPGNGFGE------------------------YGEGYFRIALTV--PDERIEEAVERIKK 384 (385)
T ss_pred --CCHHHHHHHHHHhCCEEECCchhhCC------------------------CCCCeEEEEeCC--CHHHHHHHHHHHhh
Confidence 4455554 556778999998854310 122389999973 66777766666543
No 154
>PRK12414 putative aminotransferase; Provisional
Probab=99.84 E-value=3.8e-18 Score=182.09 Aligned_cols=303 Identities=8% Similarity=0.052 Sum_probs=195.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCC-ceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDD-YTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e-~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++.+.+++.+++++|++.+. .+|++|+|+++|+.+++.++ +.+||+|++....+..+ ...++..|++++.+++
T Consensus 69 ~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~ 143 (384)
T PRK12414 69 AALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISAL-VHPGDEVIYFEPSFDSY----APIVRLQGATPVAIKL 143 (384)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHh-cCCCCEEEEeCCCccch----HHHHHHcCCEEEEEec
Confidence 466778888888888875221 24999999999999999999 89999976544333322 2344567999999998
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC----CCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG----SKDMD 328 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~----~~d~~ 328 (588)
+..++.+|.++|+++++ +++++|++++++||||..++.++ | ++|+++|+++++|++..- +....
T Consensus 144 ~~~~~~~d~~~l~~~l~--------~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~ 215 (384)
T PRK12414 144 SPEDFRVNWDEVAAAIT--------PRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHH 215 (384)
T ss_pred CccccccCHHHHHhhcC--------cccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCcc
Confidence 75566789999999887 67999999999999999987554 5 778999999999998321 11111
Q ss_pred CC-CCCC-CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 329 TL-GLSL-FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 329 ~l-~l~~-~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
++ .+.. ..--+++.|++|.||.+..++|++++.+++++.+...... . ..++..
T Consensus 216 ~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~---~----------------------~~~~s~ 270 (384)
T PRK12414 216 SMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQF---M----------------------VFSADT 270 (384)
T ss_pred CcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHhh---e----------------------ecCCCc
Confidence 11 1111 1124889999999985456689999998887765433210 0 001111
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEE-EeecCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAF-NVFDWNG 485 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f-~~~~~~g 485 (588)
+.+ .++...|+.-. ...++.+..++.++.+.+.|.++ +++++.| .|+++.+ .+....+
T Consensus 271 ~~q----~a~~~~l~~~~--~~~~~~~~~~~~r~~l~~~L~~~----------g~~~~~~-----~gg~~~~~~~~~~~~ 329 (384)
T PRK12414 271 PMQ----HAFAEALAEPA--SYLGLGAFYQRKRDLLARELAGS----------RFELLPS-----EGSFFMLARFRHFSD 329 (384)
T ss_pred HHH----HHHHHHhcCCh--HHHHHHHHHHHHHHHHHHHHHhC----------CCeecCC-----CcceEEEEcccccCC
Confidence 111 22223332100 12345556666777788888763 2444432 3555544 3332111
Q ss_pred CCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 486 TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 486 ~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
..+.+.+.+++.+.||.+.+|..+.. . ..+.++||+|++. +.|+++..++.|.+
T Consensus 330 -~~~~~~~~~~l~~~gV~v~pg~~f~~---------------~-------~~~~~~iRis~~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 330 -ESDSDFVLRLIRDARVATIPLSAFYT---------------D-------GTDTGLIRLSFSK--DDATLVEGARRLCS 383 (384)
T ss_pred -CCHHHHHHHHHHhCCEEEecchhhcC---------------C-------CCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 12345556788899999998843310 0 0112389999984 67888888877754
No 155
>PRK05939 hypothetical protein; Provisional
Probab=99.84 E-value=8.2e-19 Score=187.09 Aligned_cols=161 Identities=11% Similarity=0.124 Sum_probs=124.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....++++++|+++.|+. +.|+|++ +++|+..++.++ +++||+|++ ...|++ ....+ ..+++.|+++++++.
T Consensus 46 ~p~~~~lE~~la~leg~~---~~v~~ss-G~~Ai~~~l~al-l~~Gd~Vv~~~~~y~~-t~~~~-~~l~~~G~~v~~v~~ 118 (397)
T PRK05939 46 TPTTAALEAKITKMEGGV---GTVCFAT-GMAAIAAVFLTL-LRAGDHLVSSQFLFGN-TNSLF-GTLRGLGVEVTMVDA 118 (397)
T ss_pred CHHHHHHHHHHHHHhCCC---eEEEeCC-HHHHHHHHHHHH-cCCCCEEEECCCcccc-HHHHH-HHHHhcCCEEEEECC
Confidence 456789999999999985 3455555 589999999988 999999765 444554 22222 345778999999876
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
. +.++++++++ ++|++|++.+++|++|.+.|+++| ++||++|+++++|+++..|....++ ..
T Consensus 119 ~------d~e~l~~~l~--------~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~~---~~ 181 (397)
T PRK05939 119 T------DVQNVAAAIR--------PNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWLFRPK---DV 181 (397)
T ss_pred C------CHHHHHHhCC--------CCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccccCcc---cc
Confidence 3 6789999987 789999999999999999999999 9999999999999998776322222 23
Q ss_pred CCcEEEeccCccCCCCCCceEEEEEeC
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFVKK 362 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v~~ 362 (588)
++|+++.|++|++|.+...+|++++.+
T Consensus 182 gaDivv~S~sK~~~g~g~~igg~v~~~ 208 (397)
T PRK05939 182 GASLVINSLSKYIAGHGNALGGAVTDT 208 (397)
T ss_pred CCEEEEecCeecccCCCCeEEEEEecC
Confidence 499999999998873223356666643
No 156
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=2.4e-18 Score=185.31 Aligned_cols=160 Identities=13% Similarity=0.140 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
.....+++.|+++.|.+ . .++++++++|+.+++.++ +++||+|++ ...|+++ ...+...++..|++++.++.+
T Consensus 63 p~~~~le~~lA~l~g~~--~--al~~~SG~~Ai~~al~al-l~pGd~VIv~~~~y~~t-~~~~~~~~~~~G~~v~~vd~~ 136 (427)
T PRK05994 63 PTNAVLEERVAALEGGT--A--ALAVASGHAAQFLVFHTL-LQPGDEFIAARKLYGGS-INQFGHAFKSFGWQVRWADAD 136 (427)
T ss_pred ccHHHHHHHHHHHhCCC--c--EEEEcCHHHHHHHHHHHH-hCCCCEEEEecCcchhH-HHHHHHHHHhcCcEEEEECCC
Confidence 34568999999999984 2 788899999999999998 899999664 5566653 333345567889999998753
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFK 336 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~ 336 (588)
+.++++++|+ ++|++|++++++|++|.+.|+++| ++|+++|+++++|+++..|....+++ ++
T Consensus 137 ------d~~~l~~ai~--------~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~~pl~---~g 199 (427)
T PRK05994 137 ------DPASFERAIT--------PRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLIRPIE---HG 199 (427)
T ss_pred ------CHHHHHHhcC--------cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccCCccc---cC
Confidence 6788999887 789999999999999999999999 99999999999999998874344443 45
Q ss_pred CcEEEeccCccCCCCCCc-eEEEEEeC
Q 037063 337 PDFLICSFYKIFGENPSG-FGCLFVKK 362 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G-~G~L~v~~ 362 (588)
+|+++.|+||++|. +.| +|.+++..
T Consensus 200 aDivv~S~tK~lgg-~~~~~gG~v~~~ 225 (427)
T PRK05994 200 ADIVVHSLTKFLGG-HGNSMGGIIVDG 225 (427)
T ss_pred CcEEEEcCccccCC-CCCcEEEEEEeC
Confidence 99999999998882 333 77777753
No 157
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.84 E-value=2.5e-18 Score=178.47 Aligned_cols=319 Identities=13% Similarity=0.112 Sum_probs=217.2
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
+..+.+..+.+++++|+. ..+.++|+|.|+.+++.++.+.+||+|+ ++..+.+ .. +..-..|+++++|++
T Consensus 33 G~~v~~FE~~~ae~~G~k----~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvA-Ta----n~i~~~Ga~PVFvDi 103 (374)
T COG0399 33 GPFVRRFEQAFAEYLGVK----YAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVA-TA----NAVLLVGAKPVFVDI 103 (374)
T ss_pred ChHHHHHHHHHHHHhCCC----eEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHH-HH----HHHHHcCCeEEEEec
Confidence 456778999999999995 2899999999999999988899999966 4555554 22 233457999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC-----CCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS-----KDMDTL 330 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~-----~d~~~l 330 (588)
|..++.||++.|+++|+ ++||.|+..|. -|...+++.| ++|+++|++||.|+||+.| +.+..+
T Consensus 104 d~~T~nid~~~ie~aIt--------~~tKAIipVhl---~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~ 172 (374)
T COG0399 104 DPDTLNIDPDLIEAAIT--------PRTKAIIPVHL---AGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSF 172 (374)
T ss_pred CCcccCCCHHHHHHHcc--------cCCeEEEEehh---ccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcccccc
Confidence 98889999999999999 77999999987 8999999999 9999999999999999887 223444
Q ss_pred CCCCCCCcEEEeccC--ccCCCCCCceEEEEEeCc-chhcccCCCCCCCceEeeecCCCcccccccccccccccCC-CCC
Q 037063 331 GLSLFKPDFLICSFY--KIFGENPSGFGCLFVKKS-SASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP-ESS 406 (588)
Q Consensus 331 ~l~~~~~D~vv~S~~--K~~G~~P~G~G~L~v~~~-~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G-T~~ 406 (588)
| |+.++||| |.++. . ..|+++.+++ +.++++..... |....... .+ .+.+.| ...
T Consensus 173 G------d~~~fSF~~~K~itt-g-EGGav~tnd~ela~k~~~lr~h--G~~~~~~~-----~y------~~~~~G~N~r 231 (374)
T COG0399 173 G------DIGAFSFHATKNLTT-G-EGGAVVTNDEELAEKARSLRNH--GLSRDAVF-----KY------LHEELGYNYR 231 (374)
T ss_pred c------ceEEEEecCCCCccc-c-CceEEEeCCHHHHHHHHHHHHh--CcCCCccc-----cc------eeeecccccC
Confidence 4 89999998 77763 1 3577777764 44455443322 22100000 00 011334 233
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCc-ccEEEEEeecCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDR-GPSLAFNVFDWNG 485 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~r-g~iv~f~~~~~~g 485 (588)
+..+ ....++..|+. ++.+.++.+.+++++.+.|+++ +.+.+-.+...... -......+...
T Consensus 232 m~~i----qAAigl~QL~~--l~~~~~~R~~~a~~Y~~~l~~~---------~~~~~p~~~~~~~~~~~~~~i~~~~~-- 294 (374)
T COG0399 232 LTEI----QAAIGLAQLER--LDEINERRREIAQIYAEALKGL---------PGITLPPEPDGAVHAWHLYTILVDEE-- 294 (374)
T ss_pred HHHH----HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhhcC---------CCccccCCCCCceeeeeeeEEEecCC--
Confidence 3333 12356666766 5889999999999999999985 34333222211111 12333333332
Q ss_pred CCcCHHHHHHHHHhCCcEeccccccCcccccc-hHH---------HHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHH
Q 037063 486 TRIDPALVQKLADRHNISLSCGFLQNIFFSGE-YEQ---------ERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDT 555 (588)
Q Consensus 486 ~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~-~~~---------~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv 555 (588)
.++.+.+...|++.||. ++..+-|-...+ |.. ..+.. .....+++-++...+.+|+
T Consensus 295 -~~~R~~l~~~L~~~gi~--~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~-----------~~~r~l~LP~~p~l~~~~~ 360 (374)
T COG0399 295 -GISRDALMESLKEAGVG--AVVYFRPLHLQPAYRQLGYFPEGDLPNAED-----------LSERILSLPLHPNLSEEDV 360 (374)
T ss_pred -CCCHHHHHHHHHhCCCC--ceEEeeccccchhhhcccccccCCCchHHH-----------HhhCeEEccCCCCCCHHHH
Confidence 36688899999999887 323333211110 000 00111 1122899999999999999
Q ss_pred HHHHHHHHHhhhh
Q 037063 556 YRLWAFVSRFLDA 568 (588)
Q Consensus 556 ~~li~~l~~~l~~ 568 (588)
+++++.|++++..
T Consensus 361 ~~V~~~l~~~~~~ 373 (374)
T COG0399 361 DRVIEALKEVLGS 373 (374)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999998753
No 158
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.84 E-value=6.9e-19 Score=185.40 Aligned_cols=292 Identities=12% Similarity=0.043 Sum_probs=187.3
Q ss_pred HHHHHHHHHh----CCCCCCc-eEEEecCHHHHHHHHHHhCCCCCC---CeEEEcCCCchhHHHHHHHHHHhcCCEEEEE
Q 037063 183 KIRKRIMDFM----NISEDDY-TLVFTANQSSAFKLLAESYPFYSN---PRLLTVYDHENEAAALMIESSKKRGARVSSA 254 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~e~-~vvft~g~T~al~lv~~s~~~~~g---d~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v 254 (588)
++|+.|++++ |++.+.. .|++|+|+++|+.+++..+ .++| |+|+++...+. +....++..|++++.+
T Consensus 40 ~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~-~~~g~~~d~Vl~~~p~y~----~~~~~~~~~g~~~~~v 114 (350)
T TIGR03537 40 ALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVF-IDPEEDRRRVIFGTPGYP----VYERGALFAGGEPTAV 114 (350)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHH-cCCCCCCceEEEcCCCCc----chHHHHHhcCCEEEEc
Confidence 4555555554 7433322 5999999999999999988 7777 57776544332 2244567789999999
Q ss_pred eccC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcC---CCC
Q 037063 255 EFAW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALG---SKD 326 (588)
Q Consensus 255 ~~~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~---~~d 326 (588)
+.+. .+..+|++++++++. ++++++++++++||||..+| +++| ++|+++|+++|+|.+..- +..
T Consensus 115 ~~~~~~~~~~d~~~l~~~~~--------~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~ 186 (350)
T TIGR03537 115 KLKKEDGFLLRLEKVEKSIL--------EETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEP 186 (350)
T ss_pred ccCcccCCccCHHHHHHhhh--------hccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCC
Confidence 9863 234589999999987 67899999999999999999 5566 889999999999998532 110
Q ss_pred CCCC-CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 327 MDTL-GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 327 ~~~l-~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
...+ .+ .....+++.|++|.+|.+..++|+++.++++++.+...... + ..+++
T Consensus 187 ~~~~~~~-~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~------------------------~-~~~~~ 240 (350)
T TIGR03537 187 PHSALEV-GIENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRAN------------------------F-GVASP 240 (350)
T ss_pred CCchhhc-CcCCEEEEeecccccCCccccceeeecCHHHHHHHHHHHHh------------------------h-ccCCC
Confidence 1111 11 11134778899999985334589998877776655532211 0 01111
Q ss_pred CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE-EEEEeecCC
Q 037063 406 SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS-LAFNVFDWN 484 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i-v~f~~~~~~ 484 (588)
++.+ .++..++.. .. -+.++.++++...+.+.+.|.++ ++++..| .++. +-+.+++.
T Consensus 241 ~~~q----~~~~~~l~~-~~-~~~~~r~~l~~~~~~~~~~l~~~----------g~~~~~~-----~g~~~~~~~~~~~- 298 (350)
T TIGR03537 241 DFVQ----AAAKAAWSD-DN-HVLERRKIFKRKRDLFIEFFNKV----------GLEYLYP-----DATFYLWVKVPSG- 298 (350)
T ss_pred HHHH----HHHHHHhCC-cH-HHHHHHHHHHHHHHHHHHHHHHC----------CCcccCC-----CeEEEEEEECCCC-
Confidence 1111 222233331 11 13556677777778888888763 2444432 2343 33444431
Q ss_pred CCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 485 GTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 485 g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
++...+.+.|.++||.+..|..... .+..++|+|++ .+.+++++.++.+++
T Consensus 299 ---~~~~~l~~~L~~~gv~v~~g~~f~~------------------------~~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 299 ---IDAKDYALRLLENGIVVAPGENFGS------------------------GEEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred ---CCHHHHHHHHHHCCEEEcCchhhCC------------------------CCCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 3566777777778999998754310 11238999985 578888888877664
No 159
>PLN02263 serine decarboxylase
Probab=99.84 E-value=1.4e-17 Score=177.62 Aligned_cols=301 Identities=11% Similarity=0.071 Sum_probs=208.7
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 177 ESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 177 ~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
..+++.++-+.+++++|.+++++.-++|+|+|+|+-..+.... ..+...++.+.+-|. ++ .+.++-.|.+++.||
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~-Sv---~KAa~llgi~~~~Vp 206 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHY-SV---FKAARMYRMECVKVD 206 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccH-HH---HHHHHhcCCcceEec
Confidence 4789999999999999998766678999999999766544432 112224555544443 23 466777899999999
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCc-----EEEEeCCCcC---CC-
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGW-----HVLLDATALG---SK- 325 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~-----~vvvDaa~~~---~~- 325 (588)
.+ +++++|.++|+++|.++ ..++-+|+.+..++++|.+-|+++| ++|+++|+ +++||||-.+ |.
T Consensus 207 ~d-~~g~mD~~aL~~aI~~d-----~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~ 280 (470)
T PLN02263 207 TL-VSGEIDCADFKAKLLAN-----KDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFV 280 (470)
T ss_pred cC-CCCcCcHHHHHHHHHhC-----CCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhc
Confidence 98 88999999999999731 1347788899999999999999999 99999997 9999999332 31
Q ss_pred -CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccC--CCCCCCceEeeecCCCcccccccccccccccC
Q 037063 326 -DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSG--STSSVSTIMGIEPSFSEIIELETLDESSQSKF 402 (588)
Q Consensus 326 -d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~--~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~ 402 (588)
....+++.. ++|.+++++|||++. |.++|++++|+...+.+.. .+.. . .+. - -.
T Consensus 281 ~~~~~~df~~-~vDSIsvD~HK~l~~-P~~cgvll~R~~~~~~~~~~~~Yl~---~-------~d~---------t--i~ 337 (470)
T PLN02263 281 KRAPKVTFKK-PIGSVSVSGHKFVGC-PMPCGVQITRMEHINVLSSNVEYLA---S-------RDA---------T--IM 337 (470)
T ss_pred ccccccCCCc-CccEEEECCccccCC-CcCEEEEEEehhhHhhhccChHhhC---C-------CCC---------C--cC
Confidence 123355543 499999999999887 9999999999865443321 1111 0 000 0 13
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeec
Q 037063 403 PESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFD 482 (588)
Q Consensus 403 GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~ 482 (588)
|+.+.... +.+...|..+-..|+.++.++...+++++.+.|.++ ++.++.. +...+|+|..+.
T Consensus 338 gSR~g~~a---l~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~----------g~~~~~~----p~s~~V~f~~p~ 400 (470)
T PLN02263 338 GSRNGHAP---IFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA----------GISAMLN----ELSSTVVFERPK 400 (470)
T ss_pred CCCCcHHH---HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----------CCeEEeC----CCceEEEEecCc
Confidence 34443221 345566776666678888888899999999999984 2333332 346788887443
Q ss_pred CCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHH
Q 037063 483 WNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 483 ~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l 562 (588)
.+. ..+|..+.+- .. .+++.+..-.+.+.|+.|++.|
T Consensus 401 -------~~~-----~~~gW~L~~~-----------------------------~~--~~Hivvmphv~~~~id~fi~DL 437 (470)
T PLN02263 401 -------DEE-----FVRRWQLACQ-----------------------------GN--IAHVVVMPSVTIEKLDYFLKEL 437 (470)
T ss_pred -------hHH-----hhcceEEccC-----------------------------CC--cEEEEEcCCCCHHHHHHHHHHH
Confidence 111 1246655420 11 4666666656889999999999
Q ss_pred HHhhhhhh
Q 037063 563 SRFLDADF 570 (588)
Q Consensus 563 ~~~l~~~~ 570 (588)
++.....|
T Consensus 438 ~~~~~~~~ 445 (470)
T PLN02263 438 VEKRSTWY 445 (470)
T ss_pred HHHHhhhh
Confidence 98776554
No 160
>PRK07337 aminotransferase; Validated
Probab=99.84 E-value=2.6e-18 Score=183.54 Aligned_cols=301 Identities=13% Similarity=0.080 Sum_probs=185.8
Q ss_pred HHHHHHHHHHh----CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcC-CCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 182 SKIRKRIMDFM----NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVY-DHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 182 ~~~r~~ia~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~-e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++|+.+++++ |+..+.++|++|+|+++|+.+++.++ +++||+|++.. .|+. . ...++..|++++.++.
T Consensus 70 ~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~-~----~~~~~~~g~~~~~~~~ 143 (388)
T PRK07337 70 APLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLAL-VERGDEVLMPDPSYPC-N----RHFVAAAEGRPVLVPS 143 (388)
T ss_pred HHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHh-cCCCCEEEEeCCCchh-h----HHHHHHcCCEEEEeec
Confidence 36677777765 54222234999999999999999999 89999976544 4443 2 2344567999999998
Q ss_pred cC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCc-CCCCCCCC
Q 037063 257 AW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATAL-GSKDMDTL 330 (588)
Q Consensus 257 ~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~-~~~d~~~l 330 (588)
+. .++.++.+++++.+. +++++|++++++||||..++.++ | ++|+++|+++|+|.+-. +..+-...
T Consensus 144 ~~~~~~~~~~~~l~~~~~--------~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 215 (388)
T PRK07337 144 GPAERFQLTAADVEAAWG--------ERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPV 215 (388)
T ss_pred CCccCCcCCHHHHHhhcC--------ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCc
Confidence 63 245799999999887 68899999999999999998654 5 77899999999998732 21110111
Q ss_pred CCCCCCCcE-EEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccc
Q 037063 331 GLSLFKPDF-LICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISG 409 (588)
Q Consensus 331 ~l~~~~~D~-vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~ 409 (588)
.......++ ++.|++|.||.+..++|++++++++++.+....... ..++..+.+
T Consensus 216 ~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~~~-------------------------~~~~s~~~q 270 (388)
T PRK07337 216 SALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQNL-------------------------FICASALAQ 270 (388)
T ss_pred ChhhccCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHHHHh-------------------------ccCCChHHH
Confidence 111112344 567999999853445999999988776664332110 001111111
Q ss_pred hhhHHHHHHHHHH--HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEE-eCCCCCCCcccEEEEEeecCC-C
Q 037063 410 VSSKLVECKGLDH--ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRI-YGPKVMFDRGPSLAFNVFDWN-G 485 (588)
Q Consensus 410 ~~~~~al~~aL~~--l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i-~~p~~~~~rg~iv~f~~~~~~-g 485 (588)
.++..+++. ++. +.+..++.++.++.+.+.|+++ | +.+ ..| ..|..+-+.+.... .
T Consensus 271 ----~~~~~~l~~~~~~~--~~~~~~~~~~~r~~~~~~L~~~-------~---~~~~~~p----~~g~f~~~~~~~~~~~ 330 (388)
T PRK07337 271 ----HAALACFEPDTLAI--YERRRAEFKRRRDFIVPALESL-------G---FKVPVMP----DGAFYVYADCRGVAHP 330 (388)
T ss_pred ----HHHHHHhccCchHH--HHHHHHHHHHHHHHHHHHHHhc-------C---CccccCC----CeeEEEEEecccccCC
Confidence 122223321 111 2444555566667777777763 1 221 122 12333334443210 0
Q ss_pred CCcCHHHH-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 486 TRIDPALV-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 486 ~~i~~~~v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
..++..++ .++++++||.+.+|..+. . ..+.+++|++++. +.+++...++.|.+
T Consensus 331 ~~~~~~~~~~~ll~~~gv~v~pg~~f~----------------~-------~~~~~~~Ri~~~~--~~~~l~~~l~rl~~ 385 (388)
T PRK07337 331 AAGDSAALTQAMLHDAGVVLVPGRDFG----------------P-------HAPRDYIRLSYAT--SMSRLEEAVARLGK 385 (388)
T ss_pred CCCCHHHHHHHHHHhCCEEEeCchhhC----------------C-------CCCCCEEEEEecC--CHHHHHHHHHHHHH
Confidence 11344554 466788999999885431 0 0112399999985 57888888887776
Q ss_pred hh
Q 037063 565 FL 566 (588)
Q Consensus 565 ~l 566 (588)
++
T Consensus 386 ~l 387 (388)
T PRK07337 386 LF 387 (388)
T ss_pred Hh
Confidence 54
No 161
>PLN02509 cystathionine beta-lyase
Probab=99.84 E-value=2.1e-18 Score=186.16 Aligned_cols=303 Identities=14% Similarity=0.107 Sum_probs=191.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+.+.++++++.|.+ + +++++++++|+.++.. + +++||+|++. ..|++ ....+.....+.|++++.++.
T Consensus 132 npt~~aLE~~lA~leg~e---~-ai~~~SG~aAi~~il~-l-l~~GD~VI~~~~~y~~-t~~ll~~~l~~~G~~v~~vd~ 204 (464)
T PLN02509 132 NPTRDALESLLAKLDKAD---R-AFCFTSGMAALSAVTH-L-IKNGEEIVAGDDVYGG-SDRLLSQVVPRSGVVVKRVNT 204 (464)
T ss_pred CHHHHHHHHHHHHHhCCC---E-EEEeCcHHHHHHHHHH-H-hCCCCEEEEcCCchhh-HHHHHHHHHHHCCeEEEEeCC
Confidence 456789999999999863 2 5555667888877664 5 7899997754 44443 333334556778999998864
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
.+.++++++|+ ++|++|++.+++|++|.+.|+++| ++|+++|++|++|+++..|....+++ .
T Consensus 205 ------~d~e~l~~ai~--------~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl~---~ 267 (464)
T PLN02509 205 ------TNLDEVAAAIG--------PQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPLE---L 267 (464)
T ss_pred ------CCHHHHHHhCC--------cCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCChhh---c
Confidence 26788988887 789999999999999999999999 99999999999999988874333333 3
Q ss_pred CCcEEEeccCccCCCCCCc--eEEEEEeCcch-hcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 336 KPDFLICSFYKIFGENPSG--FGCLFVKKSSA-SVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~G~L~v~~~~~-~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
++|++++|++|+++. +.+ .|+++++++.+ +.+...... .|+ .+...
T Consensus 268 gaDivv~S~tK~l~G-~gdv~gG~v~~~~~~l~~~~~~~~~~---------------------------~g~-~l~p~-- 316 (464)
T PLN02509 268 GADIVMHSATKFIAG-HSDVMAGVLAVKGEKLAKEVYFLQNS---------------------------EGS-GLAPF-- 316 (464)
T ss_pred CCcEEEecCcccccC-CCccceeEEEeccHHHHHHHHHHHHh---------------------------cCC-CcCHH--
Confidence 489999999997773 444 68888766532 222211100 010 00111
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCC---C---------CCcccEEEEE
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKV---M---------FDRGPSLAFN 479 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~---~---------~~rg~iv~f~ 479 (588)
....++..++. ++...++..+.+.++.+.|++. |.| +|+-|.- + ..-|++++|.
T Consensus 317 --~A~l~lr~L~t--L~~R~~r~~~nA~~la~~L~~~---------p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~ 383 (464)
T PLN02509 317 --DCWLCLRGIKT--MALRIEKQQENARKIAMYLSSH---------PRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFI 383 (464)
T ss_pred --HHHHHHhhhhh--HHHHHHHHHHHHHHHHHHHhcC---------CCccEEECCCCCCCccHHHHHHhCCCCceEEEEE
Confidence 11133333333 2555666677778888888763 444 4554421 0 1237899998
Q ss_pred eecCCCCCcCHHHHHHHHHhCCc---Eecccccc----CcccccchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCCCC
Q 037063 480 VFDWNGTRIDPALVQKLADRHNI---SLSCGFLQ----NIFFSGEYEQERVRVLETRSGTNETRSGV--SVVTAALGCLT 550 (588)
Q Consensus 480 ~~~~~g~~i~~~~v~~~l~~~gI---~v~~G~~c----~~~~~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~~ 550 (588)
+.+ .+...++++...+ .++-|... ++...... ..... ... ..|+ +.||+|+|.
T Consensus 384 ~~~-------~~~~~~f~~~l~l~~~a~slG~~~SLi~~p~~~sh~-~~~~~-~~~-------~~Gi~~~liRlSvGl-- 445 (464)
T PLN02509 384 TGS-------VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHA-SIPAE-VRE-------ARGLTEDLVRISAGI-- 445 (464)
T ss_pred eCC-------HHHHHHHHHcCCcceEcccCCCCCceeeCCcccccc-cCCHH-HHH-------hcCCCCCeEEEEecc--
Confidence 732 3445566665442 23333211 11100000 00000 011 1333 389999997
Q ss_pred CHHHHHHHHHHHHHhhhh
Q 037063 551 NFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 551 t~eDv~~li~~l~~~l~~ 568 (588)
||++.|++-|.+.|+.
T Consensus 446 --E~~~DLi~Dl~~Al~~ 461 (464)
T PLN02509 446 --EDVDDLISDLDIAFRT 461 (464)
T ss_pred --CCHHHHHHHHHHHHcc
Confidence 8999999998888765
No 162
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=6.6e-19 Score=187.69 Aligned_cols=300 Identities=14% Similarity=0.107 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....+++++|+++.|.+ +.+++ +|+++|+.+++.++ +++||+|++. ..|.+ .+..+...++..|+++..++.
T Consensus 61 p~~~~Le~~lA~~~g~~---~~i~~-~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~y~~-t~~~~~~~~~~~gi~~~~~d~- 133 (388)
T PRK07811 61 PTRTALEEQLAALEGGA---YGRAF-SSGMAATDCLLRAV-LRPGDHIVIPNDAYGG-TFRLIDKVFTRWGVEYTPVDL- 133 (388)
T ss_pred ccHHHHHHHHHHHhCCC---ceEEe-CCHHHHHHHHHHHH-hCCCCEEEEcCCCchH-HHHHHHHhCcCCCeEEEEeCC-
Confidence 34679999999999995 33555 56689999999999 8999997654 44543 333334445567888888765
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFK 336 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~ 336 (588)
.|+++++++++ ++|++|+++.++|++|...|+++| ++|+++|++||+|++...+....++. ..
T Consensus 134 -----~d~e~l~~~i~--------~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~~---~g 197 (388)
T PRK07811 134 -----SDLDAVRAAIT--------PRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPLA---LG 197 (388)
T ss_pred -----CCHHHHHHhcC--------cCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCchh---hC
Confidence 37899999887 689999999999999999999999 99999999999999987763223332 24
Q ss_pred CcEEEeccCccCCCCCCc--eEEEEEeCc-chhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhH
Q 037063 337 PDFLICSFYKIFGENPSG--FGCLFVKKS-SASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSK 413 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G--~G~L~v~~~-~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~ 413 (588)
+|++++|++|++|. |.+ .|+++++++ +.+++....... |. +.+. .
T Consensus 198 aDivv~S~sK~l~g-~~~~~gG~vv~~~~~l~~~~~~~~~~~-g~-------------------------~~s~--~--- 245 (388)
T PRK07811 198 ADVVVHSTTKYIGG-HSDVVGGALVTNDEELDEAFAFLQNGA-GA-------------------------VPGP--F--- 245 (388)
T ss_pred CcEEEecCceeecC-CCCcEEEEEEECCHHHHHHHHHHHHhc-CC-------------------------CCCH--H---
Confidence 89999999998883 443 588888654 434343221110 10 0000 0
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCC------------CCcccEEEEEe
Q 037063 414 LVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVM------------FDRGPSLAFNV 480 (588)
Q Consensus 414 ~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~------------~~rg~iv~f~~ 480 (588)
.+ ..++..++. ++...++..+.+..+.+.|++. |.| +++-|.-. ..-|++++|.+
T Consensus 246 ~a-~l~~~~L~t--l~~R~~~~~~na~~la~~L~~~---------p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~ 313 (388)
T PRK07811 246 DA-YLTLRGLKT--LAVRMDRHSENAEAVAEFLAGH---------PEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRL 313 (388)
T ss_pred HH-HHHHhccCc--HHHHHHHHHHHHHHHHHHHHhC---------CCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEe
Confidence 01 122222322 3444455566677777777763 333 34444321 12478999999
Q ss_pred ecCCCCCcCHHHHHHHHHhCCc---Eeccccc----cCcccccchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCCCCC
Q 037063 481 FDWNGTRIDPALVQKLADRHNI---SLSCGFL----QNIFFSGEYEQERVRVLETRSGTNETRSGV--SVVTAALGCLTN 551 (588)
Q Consensus 481 ~~~~g~~i~~~~v~~~l~~~gI---~v~~G~~----c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~~t 551 (588)
.+ +.+.+.+++++-.+ ..+-|.. |++.....+. +. ....|+ +.||+|+|.
T Consensus 314 ~~------~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~------~~------~~~~gi~~~liR~svGl--- 372 (388)
T PRK07811 314 AG------GEEAARDFCARTKVFTLAESLGGVESLIEHPSAMTHAS------TA------GSQLEVPDDLVRLSVGI--- 372 (388)
T ss_pred CC------CHHHHHHHHHhCCcceeeccCCCCcceEeCCcccCccc------CC------HhhcCCCCCEEEEEeCC---
Confidence 64 14445666666544 2333321 1111100000 00 001233 389999997
Q ss_pred HHHHHHHHHHHHHhhh
Q 037063 552 FEDTYRLWAFVSRFLD 567 (588)
Q Consensus 552 ~eDv~~li~~l~~~l~ 567 (588)
||++.|++-|.+.|+
T Consensus 373 -E~~~dl~~dl~~al~ 387 (388)
T PRK07811 373 -EDVADLLADLEQALG 387 (388)
T ss_pred -CCHHHHHHHHHHHhh
Confidence 788888888877665
No 163
>PLN02242 methionine gamma-lyase
Probab=99.83 E-value=1.3e-18 Score=186.54 Aligned_cols=169 Identities=15% Similarity=0.110 Sum_probs=129.5
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHH-HHhcCCEEEEEe
Q 037063 177 ESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIES-SKKRGARVSSAE 255 (588)
Q Consensus 177 ~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~-a~~~G~~v~~v~ 255 (588)
.....+++++++++++|+. .+++++|+++|+.+++.++ +++||+|++....+......+... ++..|+++++++
T Consensus 74 ~~Pt~~~LE~~lA~l~g~~----~~l~~~sG~~Ai~~al~al-~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d 148 (418)
T PLN02242 74 FNPTVLNLGRQMAALEGTE----AAYCTASGMSAISSVLLQL-CSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVD 148 (418)
T ss_pred CChhHHHHHHHHHHHhCCC----eEEEEccHHHHHHHHHHHH-hCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcC
Confidence 3566789999999999984 2678999999999999999 899999876554333232222222 244788888776
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCC-cceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCC
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKK-KRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLS 333 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~-~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~ 333 (588)
.. |+++++++|+ + ++++|++.+++|+||.+.|+++| ++|+++|++||+|.++. +.....+.
T Consensus 149 ~~------d~e~l~~~i~--------~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~-~~~~~~~~-- 211 (418)
T PLN02242 149 IT------DLEAVKKAVV--------PGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFA-PMVLSPAR-- 211 (418)
T ss_pred CC------CHHHHHHhcC--------cCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCC-ccCCCHHH--
Confidence 53 7889999887 5 59999999999999999999999 99999999999999974 32122222
Q ss_pred CCCCcEEEeccCccCCCCCCc---eEEEEEeCcchhcccC
Q 037063 334 LFKPDFLICSFYKIFGENPSG---FGCLFVKKSSASVLSG 370 (588)
Q Consensus 334 ~~~~D~vv~S~~K~~G~~P~G---~G~L~v~~~~~~~l~~ 370 (588)
+.+|+++.|++|.+| +.| .|+++.++++++.+..
T Consensus 212 -~g~divv~S~SK~l~--g~g~~~gG~iv~~~~li~~l~~ 248 (418)
T PLN02242 212 -LGADVVVHSISKFIS--GGADIIAGAVCGPAELVNSMMD 248 (418)
T ss_pred -cCCcEEEEeCccccC--CCCCceEEEEEcCHHHHHHHHH
Confidence 238999999999887 334 5888888877766553
No 164
>PRK07550 hypothetical protein; Provisional
Probab=99.83 E-value=2.5e-18 Score=183.60 Aligned_cols=301 Identities=13% Similarity=0.035 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccC
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAW 258 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~ 258 (588)
++.+.+.+.+.+..|...+..+|++|+|+++|+.+++.++ .++||+|++....+.+. ...++..|++++.++.+.
T Consensus 71 ~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~ 145 (386)
T PRK07550 71 ELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTL-AGAGDEVILPLPWYFNH----KMWLDMLGIRPVYLPCDE 145 (386)
T ss_pred HHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHh-cCCCCEEEEcCCCCcch----HHHHHhcCCEEEEEecCC
Confidence 4444555555555454333345999999999999999999 79999987665544322 234567899999999873
Q ss_pred -CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCCCcC--C--CCCCC
Q 037063 259 -PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDATALG--S--KDMDT 329 (588)
Q Consensus 259 -~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa~~~--~--~d~~~ 329 (588)
.++.++.++++++++ +++++|++.+++||||..+|.+ +| ++|+++|++||+|.+... . .....
T Consensus 146 ~~~~~~~~~~l~~~~~--------~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~ 217 (386)
T PRK07550 146 GPGLLPDPAAAEALIT--------PRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHD 217 (386)
T ss_pred CcCCCCCHHHHHHHhc--------ccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcc
Confidence 245579999999997 6788988999999999999954 56 889999999999998321 1 00011
Q ss_pred C-CC-CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCc
Q 037063 330 L-GL-SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSI 407 (588)
Q Consensus 330 l-~l-~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~ 407 (588)
+ .. +...-.+++.|++|.+|.+..++|+++.+++.++.+....... ..+.+.+
T Consensus 218 ~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~-------------------------~~~~s~~ 272 (386)
T PRK07550 218 LFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEKFMDTV-------------------------AICAPRI 272 (386)
T ss_pred hhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHHHHHhhc-------------------------ccCCCcH
Confidence 1 10 0111246788999988843456999999888776554332110 0011111
Q ss_pred cchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE-EEEeecCCCC
Q 037063 408 SGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL-AFNVFDWNGT 486 (588)
Q Consensus 408 ~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv-~f~~~~~~g~ 486 (588)
.+ .++..+++.+++. +++..++..+.++++++.|.+. +++.+. + .++.+ -+.+... +
T Consensus 273 ~q----~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~-~-----~g~~~~~~~~~~~-~- 330 (386)
T PRK07550 273 GQ----IAVAWGLPNLADW-RAGNRAEIARRRDAFRAVFARL---------PGWELL-A-----SGAYFAYVRHPFP-D- 330 (386)
T ss_pred HH----HHHHHHhccHHHH-HHHHHHHHHHHHHHHHHHHHhC---------CCceeC-C-----CceEEEEecCCCC-C-
Confidence 11 2333444433332 3455566677777888888763 233332 1 23333 3333320 1
Q ss_pred CcCHHHHH-HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 487 RIDPALVQ-KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 487 ~i~~~~v~-~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
++..++. ++++++||.|.+|.... . .+..+||+|++.. +.++++.+++.|.+|
T Consensus 331 -~~~~~l~~~l~~~~gv~v~pg~~f~----------------~--------~~~~~iRis~~~~-~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 331 -RPSREVARRLAKEAGILCLPGTMFG----------------P--------GQEGYLRLAFANA-DVAGIGELVERLRAF 384 (386)
T ss_pred -CCHHHHHHHHHHhcCEEEeCchhhC----------------C--------CCCCEEEEEeecC-CHHHHHHHHHHHHhh
Confidence 4455554 45678999999884321 0 1123899999753 589999999999876
No 165
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.83 E-value=2.1e-18 Score=190.89 Aligned_cols=298 Identities=15% Similarity=0.104 Sum_probs=190.6
Q ss_pred HHHHHHHHHHh------CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 182 SKIRKRIMDFM------NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 182 ~~~r~~ia~~l------ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++|+.|++++ ++++++ |++|+|+++++.+++.++ +++||+|+++...+. .+ ...++..|++++.++
T Consensus 188 ~~lReaia~~~~~~~~~~~~~~~--I~it~G~~eal~~~~~~l-~~~Gd~Vli~~P~y~-~y---~~~~~~~g~~~v~~~ 260 (517)
T PRK13355 188 FSARKAIMQYAQLKGLPNVDVDD--IYTGNGVSELINLSMSAL-LDDGDEVLIPSPDYP-LW---TACVNLAGGTAVHYR 260 (517)
T ss_pred HHHHHHHHHHHHhcCCCCCChhH--EEEeCcHHHHHHHHHHHh-CCCCCEEEEcCCCCc-CH---HHHHHHCCCEEEEee
Confidence 47889999988 677665 999999999999999999 899999775544332 22 345567899999998
Q ss_pred ccCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCc--C--CCC
Q 037063 256 FAWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATAL--G--SKD 326 (588)
Q Consensus 256 ~~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~--~--~~d 326 (588)
.+.. ++.+|+++|+++++ ++++++++++++||||..++ +++| ++|+++|++||+|.+-. . +..
T Consensus 261 ~~~~~~~~~d~~~l~~~~~--------~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~ 332 (517)
T PRK13355 261 CDEQSEWYPDIDDIRSKIT--------SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLE 332 (517)
T ss_pred cCcccCCCCCHHHHHHhcC--------cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCC
Confidence 8633 45789999999887 78999999999999999999 5556 88999999999999832 1 110
Q ss_pred CCCCCCCCCCCc---EEEeccCccCCCCCCceEEEEEe--Ccchh----cccCCCCCCCceEeeecCCCccccccccccc
Q 037063 327 MDTLGLSLFKPD---FLICSFYKIFGENPSGFGCLFVK--KSSAS----VLSGSTSSVSTIMGIEPSFSEIIELETLDES 397 (588)
Q Consensus 327 ~~~l~l~~~~~D---~vv~S~~K~~G~~P~G~G~L~v~--~~~~~----~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~ 397 (588)
..++ .....| +++.|+.|.++.+..++|++++. +++++ .+.....-
T Consensus 333 ~~s~--~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~----------------------- 387 (517)
T PRK13355 333 HTSI--ASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLANM----------------------- 387 (517)
T ss_pred cccH--HHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHhcC-----------------------
Confidence 1111 011123 33479999888544569999965 33222 11100000
Q ss_pred ccccCCCCCccchhhHHHHHHHHHH---HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 398 SQSKFPESSISGVSSKLVECKGLDH---ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 398 ~f~e~GT~~~~~~~~~~al~~aL~~---l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
..+...+.+ .++..+|+. +... +... ++..+.++++.+.|.++ ++++++.| .|+
T Consensus 388 ---~~~~~~~~q----~a~~~aL~~~~~~~~~-~~~~-~~~~~~r~~l~~~L~~~---------~g~~~~~p-----~g~ 444 (517)
T PRK13355 388 ---RLCSNVPAQ----SIVQTALGGHQSVKDY-LVPG-GRVYEQRELVYNALNAI---------PGISAVKP-----KAA 444 (517)
T ss_pred ---cCCcChHHH----HHHHHHhcCCccHHHH-HHHH-HHHHHHHHHHHHHHhcC---------CCcccCCC-----Cee
Confidence 001111111 223344421 1111 1221 23334467788888764 55666543 466
Q ss_pred EEEE-EeecCC-CCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCH
Q 037063 475 SLAF-NVFDWN-GTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNF 552 (588)
Q Consensus 475 iv~f-~~~~~~-g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~ 552 (588)
++.| .+.... +..-+.+.+.++|.++||.+..|..+.. .+.++||+|+. .+.
T Consensus 445 fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~------------------------~~~~~~Ris~~--~~~ 498 (517)
T PRK13355 445 FYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNW------------------------DKPDHFRVVYL--PRL 498 (517)
T ss_pred eEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCC------------------------CCcCEEEEEeC--CCH
Confidence 6655 343210 0001234567889999999998854310 12239999984 688
Q ss_pred HHHHHHHHHHHHhhhh
Q 037063 553 EDTYRLWAFVSRFLDA 568 (588)
Q Consensus 553 eDv~~li~~l~~~l~~ 568 (588)
++++..++.|.++++.
T Consensus 499 ~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 499 EDLEDAMDRLADFFSY 514 (517)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988763
No 166
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.83 E-value=1.8e-18 Score=186.33 Aligned_cols=299 Identities=12% Similarity=0.050 Sum_probs=189.8
Q ss_pred HHHHHHHHHHhC------------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCC
Q 037063 182 SKIRKRIMDFMN------------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGA 249 (588)
Q Consensus 182 ~~~r~~ia~~lg------------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~ 249 (588)
.++|+.|+++++ ++++ +|++|+|+++|+.+++.++ .++||+|++....+... ...++..|+
T Consensus 78 ~~Lr~aia~~~~~~~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~vlv~~P~y~~~----~~~~~~~g~ 150 (412)
T PTZ00433 78 PEAREAVATYWRNSFVHKESLKSTIKKD--NVVLCSGVSHAILMALTAL-CDEGDNILVPAPGFPHY----ETVCKAYGI 150 (412)
T ss_pred HHHHHHHHHHHHhhccccccccCCCChh--hEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCcccH----HHHHHHcCC
Confidence 367888888775 4454 4999999999999999999 89999977654433312 345677899
Q ss_pred EEEEEeccC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC-
Q 037063 250 RVSSAEFAW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG- 323 (588)
Q Consensus 250 ~v~~v~~~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~- 323 (588)
+++.++.+. .++.+++++|++.+. +++++|++++++||||..++.++ | ++|+++|++||+|.+..-
T Consensus 151 ~~~~i~~~~~~~~~~d~~~l~~~~~--------~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~ 222 (412)
T PTZ00433 151 EMRFYNCRPEKDWEADLDEIRRLVD--------DRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGM 222 (412)
T ss_pred EEEEEecCccccCcCCHHHHHHHhc--------cCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccccc
Confidence 999999863 245789999998887 67899999999999999998655 5 778999999999998431
Q ss_pred ---CCCCCC-CCCCCCCCcEEEeccCccCCCCCCceEEEEEe------CcchhcccCCCCCCCceEeeecCCCccccccc
Q 037063 324 ---SKDMDT-LGLSLFKPDFLICSFYKIFGENPSGFGCLFVK------KSSASVLSGSTSSVSTIMGIEPSFSEIIELET 393 (588)
Q Consensus 324 ---~~d~~~-l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~------~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~ 393 (588)
+..... ..+.....-+++.||.|.||.+..++|++++. +++++.+......
T Consensus 223 ~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~------------------- 283 (412)
T PTZ00433 223 VFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGML------------------- 283 (412)
T ss_pred ccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhc-------------------
Confidence 100011 11211112367889999987656779999972 2233333221100
Q ss_pred ccccccccCCCCCccchhhHHHHHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCc
Q 037063 394 LDESSQSKFPESSISGVSSKLVECKGLDH-ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDR 472 (588)
Q Consensus 394 ~~~~~f~e~GT~~~~~~~~~~al~~aL~~-l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~r 472 (588)
..+++.+.+ .++..++.. .+.. ++++.++++...+++.+.|.++ .++.++.| .
T Consensus 284 -------~~~~~~~~q----~a~~~~l~~~~~~~-~~~~~~~~~~~r~~l~~~L~~~---------~~~~~~~p-----~ 337 (412)
T PTZ00433 284 -------VCGPCSVVQ----AALGEALLNTPQEH-LEQIVAKLEEGAMVLYNHIGEC---------IGLSPTMP-----R 337 (412)
T ss_pred -------cCCCChHHH----HHHHHHHhcCcHHH-HHHHHHHHHHHHHHHHHHHhcC---------CCCcccCC-----C
Confidence 001111111 222233321 1111 4666667777777788887763 23443333 3
Q ss_pred cc-EEEEEeecCC-CCCcCHHH-HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC
Q 037063 473 GP-SLAFNVFDWN-GTRIDPAL-VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL 549 (588)
Q Consensus 473 g~-iv~f~~~~~~-g~~i~~~~-v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~ 549 (588)
++ .+-+.+.... ....+... +.++++++||.++.|..+. .. +++|++++.
T Consensus 338 gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~------------------------~~--~~iRis~~~- 390 (412)
T PTZ00433 338 GSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFH------------------------MP--GFTRLTISR- 390 (412)
T ss_pred eeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccC------------------------CC--CeEEEEecC-
Confidence 33 3333443210 00112334 4555667899999874331 01 289999985
Q ss_pred CCHHHHHHHHHHHHHhhhh
Q 037063 550 TNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 550 ~t~eDv~~li~~l~~~l~~ 568 (588)
..+++++.++.|.++++.
T Consensus 391 -~~e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 391 -PVEVLREAVERIKAFCER 408 (412)
T ss_pred -CHHHHHHHHHHHHHHHHH
Confidence 488899999999887753
No 167
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.83 E-value=2e-18 Score=185.33 Aligned_cols=300 Identities=14% Similarity=0.055 Sum_probs=189.7
Q ss_pred HHHHHHHHHHhC-----CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 182 SKIRKRIMDFMN-----ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 182 ~~~r~~ia~~lg-----a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++|+.|+++++ +++++ |++|+|+++|+.+++.++ .++||+|++....+. .....++..|++++.+++
T Consensus 76 ~~lr~aia~~~~~~~~~~~~~~--i~~t~G~~~al~~~~~~l-~~~gd~v~i~~P~y~----~~~~~~~~~g~~v~~~~~ 148 (401)
T TIGR01264 76 LSAREAIASYYHNPDGPIEADD--VVLCSGCSHAIEMCIAAL-ANAGQNILVPRPGFP----LYETLAESMGIEVKLYNL 148 (401)
T ss_pred HHHHHHHHHHHhhcCCCCCHHH--EEECcChHHHHHHHHHHh-CCCCCEEEEeCCCCh----hHHHHHHHcCCEEEEeec
Confidence 468888888887 55554 999999999999999999 789999765544332 124566788999999988
Q ss_pred cCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCc--C--CCCC
Q 037063 257 AWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATAL--G--SKDM 327 (588)
Q Consensus 257 ~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~--~--~~d~ 327 (588)
+.. ++.+++++|++.++ ++++++++++++||||..++.++ | ++|+++|++||+|.+.. . +...
T Consensus 149 ~~~~~~~~d~~~l~~~~~--------~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 220 (401)
T TIGR01264 149 LPDKSWEIDLKQLESLID--------EKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATF 220 (401)
T ss_pred CCccCCCCCHHHHHHHhc--------cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCccc
Confidence 532 46799999998887 57899999999999999998554 5 77899999999999832 1 1111
Q ss_pred CCC-CCCCCCCcEEEeccCccCCCCCCceEEEEEeCc------chhcccCCCCCCCceEeeecCCCcccccccccccccc
Q 037063 328 DTL-GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKS------SASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS 400 (588)
Q Consensus 328 ~~l-~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~------~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~ 400 (588)
.++ .+.....-+++.||.|.||.+..++|++++.+. .++.+......
T Consensus 221 ~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~-------------------------- 274 (401)
T TIGR01264 221 EPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQR-------------------------- 274 (401)
T ss_pred ccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhhc--------------------------
Confidence 111 111111136788999988865567999998742 22222111000
Q ss_pred cCCCCCccchhhHHHHHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEE
Q 037063 401 KFPESSISGVSSKLVECKGLDH-ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFN 479 (588)
Q Consensus 401 e~GT~~~~~~~~~~al~~aL~~-l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~ 479 (588)
..+...+.+ .++..+|+. .+.. +++..++.+..++++.+.|.++ +++.+..| ..|..+-+.
T Consensus 275 ~~~~~~~~q----~a~~~~l~~~~~~~-l~~~~~~~~~~r~~l~~~L~~~---------~~~~~~~p----~~g~f~~~~ 336 (401)
T TIGR01264 275 ILGPCTIVQ----GALPSILLRTPQEY-FDGTLSVLESNAMLCYGALAAV---------PGLRPVMP----SGAMYMMVG 336 (401)
T ss_pred cCCCCcHHH----HHHHHHHHhCcHHH-HHHHHHHHHHHHHHHHHHHHhC---------CCCcccCC----CeeeEEEEE
Confidence 001111111 222333321 1111 4555666666677788888764 33443333 223344444
Q ss_pred eecC-CCCCcCHHHH-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHH
Q 037063 480 VFDW-NGTRIDPALV-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYR 557 (588)
Q Consensus 480 ~~~~-~g~~i~~~~v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~ 557 (588)
+... .....+...+ .++++++||.++.|.... ..+ ++|+|++. ..++++.
T Consensus 337 ~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~------------------------~~~--~iRis~~~--~~~~l~~ 388 (401)
T TIGR01264 337 IEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFE------------------------YPG--FFRVVLTV--PVVMMEE 388 (401)
T ss_pred ecccccCCCCCHHHHHHHHHHhCCEEEeCchhcC------------------------CCC--eEEEEEcC--CHHHHHH
Confidence 4321 0011233444 555678999998874320 022 89999984 5799999
Q ss_pred HHHHHHHhhhh
Q 037063 558 LWAFVSRFLDA 568 (588)
Q Consensus 558 li~~l~~~l~~ 568 (588)
.++.|.+++++
T Consensus 389 ~l~rl~~~~~~ 399 (401)
T TIGR01264 389 ACSRIQEFCER 399 (401)
T ss_pred HHHHHHHHHhc
Confidence 99999888764
No 168
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=1.2e-18 Score=184.37 Aligned_cols=166 Identities=13% Similarity=0.021 Sum_probs=128.8
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+.++++|+.+-+.. . .++++++++|+..++.++ +++||+|++ ...|++ ....+...+++.|+++.+++.
T Consensus 63 nPt~~~Le~~la~le~~~---~-~v~~sSG~aAi~~~l~al-l~~GD~Vlv~~~~Y~~-~~~l~~~~l~~~Gi~v~~vd~ 136 (395)
T PRK05967 63 TPTTDALCKAIDALEGSA---G-TILVPSGLAAVTVPFLGF-LSPGDHALIVDSVYYP-TRHFCDTMLKRLGVEVEYYDP 136 (395)
T ss_pred ChHHHHHHHHHHHHhCCC---C-EEEECcHHHHHHHHHHHh-cCCCCEEEEccCCcHH-HHHHHHHHHHhcCeEEEEeCC
Confidence 455678899999887653 2 456666899999999999 999999765 445554 444445677889999999865
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ +.++++++++ ++|++|++.+++|++|.+.|+++| ++|+++|+++++|++...|....+++ +
T Consensus 137 ~------~~e~l~~al~--------~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~pl~---~ 199 (395)
T PRK05967 137 E------IGAGIAKLMR--------PNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLD---F 199 (395)
T ss_pred C------CHHHHHHhcC--------cCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceecChhH---c
Confidence 3 3477888887 789999999999999999999999 99999999999999988885445544 3
Q ss_pred CCcEEEeccCccCCCCCCc---eEEEEEeCcchhcc
Q 037063 336 KPDFLICSFYKIFGENPSG---FGCLFVKKSSASVL 368 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G---~G~L~v~~~~~~~l 368 (588)
++|+++.|..|+++ +.| .|++..+++.++++
T Consensus 200 GaDivv~S~tKy~~--Gh~d~~~G~v~~~~~~~~~l 233 (395)
T PRK05967 200 GVDISIHAATKYPS--GHSDILLGTVSANEKCWPQL 233 (395)
T ss_pred CCCEEEEecccccC--CCCCeeEEEEEcCHHHHHHH
Confidence 49999999999876 223 67666565544444
No 169
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.83 E-value=2.1e-18 Score=183.16 Aligned_cols=160 Identities=16% Similarity=0.065 Sum_probs=123.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+.++++++++.|++ + .++++|++.|+.+++. + +++||+|++ ...|++ ....+...++..|+++++++.
T Consensus 49 ~p~~~~Le~~la~l~g~~---~-al~~~SG~~Al~~~l~-~-l~pGd~Vi~~~~~y~~-t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 49 NPTRFALEELIADLEGGV---K-GFAFASGLAGIHAVFS-L-FQSGDHVLLGDDVYGG-TFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred ChhHHHHHHHHHHHhCCC---C-EEEECCHHHHHHHHHH-H-cCCCCEEEEcCCChhH-HHHHHHHHHHhcCeEEEEcCC
Confidence 455679999999999974 2 4555666789987775 5 689999765 445654 344445667888999998865
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
. ++++++++++ +++++|++.+++|++|...|+++| ++|+++|+++++|+++..+....+++ +
T Consensus 122 ~------d~e~l~~ai~--------~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p~~---~ 184 (380)
T PRK06176 122 S------DLSQIKKAIK--------PNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPLL---L 184 (380)
T ss_pred C------CHHHHHHhcC--------cCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCCccc---c
Confidence 2 7889998887 789999999999999999999999 99999999999999987663223332 3
Q ss_pred CCcEEEeccCccCCCCCCc--eEEEEEeC
Q 037063 336 KPDFLICSFYKIFGENPSG--FGCLFVKK 362 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~G~L~v~~ 362 (588)
.+|++++|++|++|. |.. .|+++.++
T Consensus 185 gaDivv~S~tK~l~g-~~d~~gG~vv~~~ 212 (380)
T PRK06176 185 GADIVVHSGTKYLGG-HSDVVAGLVTTNN 212 (380)
T ss_pred CCCEEEecCceeccC-CccceeeEEEecH
Confidence 599999999998873 432 56666654
No 170
>PRK09265 aminotransferase AlaT; Validated
Probab=99.83 E-value=5.7e-18 Score=181.96 Aligned_cols=301 Identities=16% Similarity=0.091 Sum_probs=188.2
Q ss_pred HHHHHHHHHHh------CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEE
Q 037063 182 SKIRKRIMDFM------NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSA 254 (588)
Q Consensus 182 ~~~r~~ia~~l------ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v 254 (588)
.++|+.+++++ ++++++ |++|+|+++++.+++.++ +++||+|++. ..|+. . ...++..|++++.+
T Consensus 75 ~~lr~~ia~~~~~~~~~~~~~~~--i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~~p~y~~-~----~~~~~~~g~~~v~~ 146 (404)
T PRK09265 75 FSARKAIMQYYQQKGIPDVDVDD--IYIGNGVSELIVMAMQAL-LNNGDEVLVPAPDYPL-W----TAAVSLSGGKPVHY 146 (404)
T ss_pred HHHHHHHHHHHhccCCCCCCccc--EEEeCChHHHHHHHHHHh-CCCCCEEEEeCCCCcC-h----HHHHHHcCCEEEEE
Confidence 37888898887 677765 999999999999999998 8999996654 44442 2 34456679999888
Q ss_pred eccCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcC----CC
Q 037063 255 EFAWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALG----SK 325 (588)
Q Consensus 255 ~~~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~----~~ 325 (588)
+.+.. ++.++.+++++.+. +++++|++++++||||..+| +++| ++|+++|+++|+|.+..- +.
T Consensus 147 ~~~~~~~~~~d~~~l~~~~~--------~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~ 218 (404)
T PRK09265 147 LCDEEAGWFPDLDDIRSKIT--------PRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGA 218 (404)
T ss_pred ecccccCCCCCHHHHHHhcc--------ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCC
Confidence 87632 45689999999887 67999999999999999999 6667 889999999999988321 10
Q ss_pred CCCCC-CCCCCCCcEEEeccCccCCCCCCceEEEEEe--Ccc----hhcccCCCCCCCceEeeecCCCcccccccccccc
Q 037063 326 DMDTL-GLSLFKPDFLICSFYKIFGENPSGFGCLFVK--KSS----ASVLSGSTSSVSTIMGIEPSFSEIIELETLDESS 398 (588)
Q Consensus 326 d~~~l-~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~--~~~----~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~ 398 (588)
...++ .+.....-+++.|+.|.+|.+...+|+++.. +.. ++.+......
T Consensus 219 ~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~------------------------ 274 (404)
T PRK09265 219 VHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDMLASM------------------------ 274 (404)
T ss_pred CcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHHhcc------------------------
Confidence 01111 1111001245679999997544568999974 222 2212100000
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE
Q 037063 399 QSKFPESSISGVSSKLVECKGLDHADALG-LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA 477 (588)
Q Consensus 399 f~e~GT~~~~~~~~~~al~~aL~~l~~~G-~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~ 477 (588)
..++..+.+ .++..+|...+... +.+..++..+.++++.+.|+++ +++++..| .++...
T Consensus 275 --~~~~~~~~q----~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~---------~~~~~~~p-----~~g~~l 334 (404)
T PRK09265 275 --RLCANVPAQ----HAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAI---------PGVSCVKP-----KGALYA 334 (404)
T ss_pred --ccCCCcHHH----HHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcC---------CCCcccCC-----CcceEE
Confidence 001111111 22334442111110 1111234555567777777663 34555443 344444
Q ss_pred E-EeecCC-CCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHH
Q 037063 478 F-NVFDWN-GTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDT 555 (588)
Q Consensus 478 f-~~~~~~-g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv 555 (588)
| .+.+.. +..-+.+.+.+++.++||.+..|..+.. .+..++|++++ .+.|++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~------------------------~~~~~~Ri~~~--~~~e~l 388 (404)
T PRK09265 335 FPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNW------------------------PEPDHFRIVTL--PRVDDL 388 (404)
T ss_pred EEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCC------------------------CCCCeEEEEeC--CCHHHH
Confidence 3 443210 1111234577889999999988843310 11228999985 688999
Q ss_pred HHHHHHHHHhhhh
Q 037063 556 YRLWAFVSRFLDA 568 (588)
Q Consensus 556 ~~li~~l~~~l~~ 568 (588)
+..++.|+++++.
T Consensus 389 ~~~l~rl~~~l~~ 401 (404)
T PRK09265 389 EEAIGRIGRFLSG 401 (404)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988753
No 171
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.83 E-value=2.8e-18 Score=183.07 Aligned_cols=295 Identities=16% Similarity=0.173 Sum_probs=189.7
Q ss_pred HHHHHHHHHh----C--CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 183 KIRKRIMDFM----N--ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 183 ~~r~~ia~~l----g--a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++|+.|++++ | ++++ +|++|+|+++|+.+++.++ +++||+|++....+... ...++..|++++.++.
T Consensus 70 ~lr~~ia~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~vlv~~p~y~~~----~~~~~~~g~~~~~~~~ 142 (384)
T PRK06348 70 ELIEEIIKYYSKNYDLSFKRN--EIMATVGACHGMYLALQSI-LDPGDEVIIHEPYFTPY----KDQIEMVGGKPIILET 142 (384)
T ss_pred HHHHHHHHHHHHHhCCCCChh--hEEEcCChHHHHHHHHHHh-cCCCCEEEEeCCCCcch----HHHHHHcCCEEEEecC
Confidence 4666666665 3 5554 4999999999999999999 89999977655544322 3455667999998886
Q ss_pred cC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC---CCCCC
Q 037063 257 AW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG---SKDMD 328 (588)
Q Consensus 257 ~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~---~~d~~ 328 (588)
.. .+..+++++|++++. +++++|+++.++||||..++.++ | ++|+++|+++|+|.+..- .....
T Consensus 143 ~~~~~~~~d~~~l~~~~~--------~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 214 (384)
T PRK06348 143 YEEDGFQINVKKLEALIT--------SKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFV 214 (384)
T ss_pred CcCcCCcCCHHHHHHhhC--------cCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCcc
Confidence 42 334589999999887 67899999999999999999665 5 778999999999998321 10011
Q ss_pred CC-CCCC-CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 329 TL-GLSL-FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 329 ~l-~l~~-~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
++ .+.. ....+++.|+.|.+|.+..++|++++++++++.+....... ..+.+.
T Consensus 215 ~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~-------------------------~~~~~~ 269 (384)
T PRK06348 215 PMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINEGI-------------------------CFSAPT 269 (384)
T ss_pred chhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHHHHHHHhc-------------------------cCCCCH
Confidence 11 1111 12457888999998854567999999887766554322110 000111
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE-EEeecCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA-FNVFDWNG 485 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~-f~~~~~~g 485 (588)
+.+ .++..+|+..++. ++++.+..+..++++.+.|..+ ++++++.| .++++. +.+++. +
T Consensus 270 ~~q----~~~~~~l~~~~~~-~~~~~~~~~~r~~~~~~~L~~~---------~~~~~~~p-----~gg~~~~~~~~~~-~ 329 (384)
T PRK06348 270 ISQ----RAAIYALKHRDTI-VPLIKEEFQKRLEYAYKRIESI---------PNLSLHPP-----KGSIYAFINIKKT-G 329 (384)
T ss_pred HHH----HHHHHHHhCcHHH-HHHHHHHHHHHHHHHHHHHhcC---------CCceeccC-----CeeEEEEEecccC-C
Confidence 111 2233444332222 3455556666677777877763 44555543 345443 344321 1
Q ss_pred CCcCHHHHHH-HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 486 TRIDPALVQK-LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 486 ~~i~~~~v~~-~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
++...+.. ++++.||.+.+|.... . .+..+||+|++ .+.++++..++.|++
T Consensus 330 --~~~~~l~~~l~~~~gv~v~pg~~f~----------------~--------~~~~~iRi~~~--~~~~~l~~al~~l~~ 381 (384)
T PRK06348 330 --LSSVEFCEKLLKEAHVLVIPGKAFG----------------E--------SGEGYIRLACT--VGIEVLEEAFNRIEK 381 (384)
T ss_pred --CCHHHHHHHHHHhCCEEEcCchhhc----------------c--------CCCCeEEEEec--CCHHHHHHHHHHHHh
Confidence 34555554 5577899999884331 0 12238999986 477888888887765
Q ss_pred h
Q 037063 565 F 565 (588)
Q Consensus 565 ~ 565 (588)
+
T Consensus 382 ~ 382 (384)
T PRK06348 382 M 382 (384)
T ss_pred h
Confidence 3
No 172
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=3.1e-18 Score=181.76 Aligned_cols=167 Identities=13% Similarity=0.067 Sum_probs=125.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.....++++.++++.|++ + .+++++++.++.++. .+ +++||+|++ ...|.+ .+..+.+.++..|++++.++.
T Consensus 49 ~p~~~~Le~~lA~l~g~~---~-~~~~~sG~aai~~~~-~~-l~~Gd~Viv~~~~y~~-~~~~~~~~~~~~G~~v~~v~~ 121 (377)
T PRK07671 49 NPTRAALEELIAVLEGGH---A-GFAFGSGMAAITAVM-ML-FSSGDHVILTDDVYGG-TYRVMTKVLNRFGIEHTFVDT 121 (377)
T ss_pred ChHHHHHHHHHHHHhCCC---c-eEEeCCHHHHHHHHH-HH-hCCCCEEEECCCccch-HHHHHHHHHhcCCeEEEEECC
Confidence 556789999999999984 2 345666677887765 45 789999764 444543 333335566778999999874
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
.|.++++++|+ ++|++|++++++|++|...|+++| ++|+++|+++++|++...+....+++ +
T Consensus 122 ------~d~~~l~~ai~--------~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p~~---~ 184 (377)
T PRK07671 122 ------SNLEEVEEAIR--------PNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQSPIS---L 184 (377)
T ss_pred ------CCHHHHHHhcC--------CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCChhh---h
Confidence 27889999987 789999999999999999999999 99999999999999976653223332 3
Q ss_pred CCcEEEeccCccCCCCCCc--eEEEEEeC-cchhccc
Q 037063 336 KPDFLICSFYKIFGENPSG--FGCLFVKK-SSASVLS 369 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~G~L~v~~-~~~~~l~ 369 (588)
++|+++.|++|++|. |.+ .|++++++ ++++++.
T Consensus 185 g~Divv~S~sK~l~G-~~~~~~G~~v~~~~~l~~~~~ 220 (377)
T PRK07671 185 GADIVLHSATKYLGG-HSDVVAGLVVVNSPELAEDLH 220 (377)
T ss_pred CCeEEEecCcccccC-CccceeEEEEeCcHHHHHHHH
Confidence 489999999998873 543 46666654 4444443
No 173
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.83 E-value=5.6e-18 Score=183.12 Aligned_cols=301 Identities=11% Similarity=0.049 Sum_probs=192.2
Q ss_pred HHHHHHHHHHhC------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 182 SKIRKRIMDFMN------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 182 ~~~r~~ia~~lg------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++|+.|+++++ ++++ +|++|+|+++|+.+++..+ .++||+|+++...+.. + ...+...|++++.++
T Consensus 97 ~~lr~aia~~~~~~~~~~~~~~--~v~it~G~~~al~l~~~~l-~~~Gd~Vlv~~P~y~~-y---~~~~~~~g~~~~~~~ 169 (430)
T PLN00145 97 LPARRAIAEYLSRDLPYELSTD--DIYLTAGCAQAIEIIMSVL-AQPGANILLPRPGYPL-Y---EARAVFSGLEVRHFD 169 (430)
T ss_pred HHHHHHHHHHHhhccCCCCChh--hEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCcc-H---HHHHHHcCCEEEEee
Confidence 478888888874 3444 4999999999999999999 7999997765444331 2 234566799999998
Q ss_pred ccC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCH---HHH-HHHHHcCcEEEEeCCCc--C--CCC
Q 037063 256 FAW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSY---MWM-SVAAEKGWHVLLDATAL--G--SKD 326 (588)
Q Consensus 256 ~~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl---~~I-~~a~~~g~~vvvDaa~~--~--~~d 326 (588)
+.. .++.+|.++|+++++ ++++++++++++||||..+|. ++| ++|+++|++||+|.+-. . ...
T Consensus 170 ~~~~~~~~~d~~~l~~~~~--------~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~ 241 (430)
T PLN00145 170 LLPERGWEVDLEGVEALAD--------ENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKP 241 (430)
T ss_pred CCcccCCcCCHHHHHHHhC--------cCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCC
Confidence 742 346799999999887 789999999999999999994 456 77999999999999832 1 111
Q ss_pred CCCC-CCCCCCCcEEEeccCccCCCCCCceEEEEEe--Ccchhc------ccCCCCCCCceEeeecCCCccccccccccc
Q 037063 327 MDTL-GLSLFKPDFLICSFYKIFGENPSGFGCLFVK--KSSASV------LSGSTSSVSTIMGIEPSFSEIIELETLDES 397 (588)
Q Consensus 327 ~~~l-~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~--~~~~~~------l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~ 397 (588)
..++ .++....-+++.|+.|.|+.+..++|++++. +.+++. ++... . .
T Consensus 242 ~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~-~---~------------------- 298 (430)
T PLN00145 242 FVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYL-N---I------------------- 298 (430)
T ss_pred ccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHh-c---c-------------------
Confidence 1111 1122224578889999887656779999984 233221 11100 0 0
Q ss_pred ccccCCCCCccchhhHHHHHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE
Q 037063 398 SQSKFPESSISGVSSKLVECKGLDH-ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL 476 (588)
Q Consensus 398 ~f~e~GT~~~~~~~~~~al~~aL~~-l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv 476 (588)
..+++.+.+ .++..+|+. .+.. +++..++.+..++.+++.|+.+ +++..... ..|+..
T Consensus 299 ---~~~~~~~~Q----~a~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~L~~~---------~g~~~~~~----P~ga~y 357 (430)
T PLN00145 299 ---STDPATFVQ----GAIPQIIANTKEEF-FTKTLGLLKETADICYEKIKEI---------KCITCPHK----PEGSMF 357 (430)
T ss_pred ---cCCCCHHHH----HHHHHHHhcCHHHH-HHHHHHHHHHHHHHHHHHHhcC---------CCCCCCcC----CCeeeE
Confidence 011112222 223334432 1111 4566667777788888888763 34433211 234443
Q ss_pred EE-EeecC--CCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHH
Q 037063 477 AF-NVFDW--NGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFE 553 (588)
Q Consensus 477 ~f-~~~~~--~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~e 553 (588)
.+ .+... .+...+.+.+.+++++.||.+.+|.... ..+++|||++. ..+
T Consensus 358 ~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg--------------------------~~~~lRis~~~--~~~ 409 (430)
T PLN00145 358 VMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALG--------------------------MKNWLRITFAI--DPP 409 (430)
T ss_pred EEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccC--------------------------CCCeEEEEeCC--CHH
Confidence 33 33211 1111123455688889999999885320 11299999983 788
Q ss_pred HHHHHHHHHHHhhhhh
Q 037063 554 DTYRLWAFVSRFLDAD 569 (588)
Q Consensus 554 Dv~~li~~l~~~l~~~ 569 (588)
+++..++.|++|+...
T Consensus 410 ~l~~al~rl~~~~~~~ 425 (430)
T PLN00145 410 SLEDGLERLKSFCLRH 425 (430)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8999998888887654
No 174
>PLN02187 rooty/superroot1
Probab=99.82 E-value=5.2e-18 Score=184.80 Aligned_cols=307 Identities=14% Similarity=0.091 Sum_probs=193.2
Q ss_pred HHHHHHHHHHhC------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 182 SKIRKRIMDFMN------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 182 ~~~r~~ia~~lg------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++|+.||++++ +++++ |++|+|+++|+.+++.++ +++||+|++....+. .+ ...++..|++++.++
T Consensus 111 ~~lR~aiA~~~~~~~~~~~~~~~--I~it~G~~~al~~~~~~l-~~pGd~Vlv~~P~y~-~y---~~~~~~~g~~~~~~~ 183 (462)
T PLN02187 111 LPARRAVADYMNRDLPHKLTPED--IFLTAGCNQGIEIVFESL-ARPNANILLPRPGFP-HY---DARAAYSGLEVRKFD 183 (462)
T ss_pred HHHHHHHHHHHHHhcCCCCCccc--EEEeCCHHHHHHHHHHHh-cCCCCEEEEeCCCCc-cH---HHHHHHcCCEEEEEe
Confidence 468888888873 56554 999999999999999999 899999775544333 12 345577899999998
Q ss_pred ccC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC----CCC
Q 037063 256 FAW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG----SKD 326 (588)
Q Consensus 256 ~~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~----~~d 326 (588)
+.. .+..+|.++|+++++ ++++++++++++||||..++.++ | ++|+++|++||+|.+..- +..
T Consensus 184 l~~~~~~~~d~~~l~~~~~--------~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~ 255 (462)
T PLN02187 184 LLPEKEWEIDLEGIEAIAD--------ENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNP 255 (462)
T ss_pred CccccCCccCHHHHHHhcC--------CCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCC
Confidence 842 356799999998887 68999999999999999999554 5 778999999999998321 110
Q ss_pred CCCC-CCCCCCCcEEEeccCccCCCCCCceEEEEEeC-c-c---hhcccCCCCCCCceEeeecCCCcccccccccccccc
Q 037063 327 MDTL-GLSLFKPDFLICSFYKIFGENPSGFGCLFVKK-S-S---ASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS 400 (588)
Q Consensus 327 ~~~l-~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~-~-~---~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~ 400 (588)
..++ .+.....-+++.|+.|.|+.+..++|++++.+ + . ++.+....... +.
T Consensus 256 ~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~-~~---------------------- 312 (462)
T PLN02187 256 FVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNL-DV---------------------- 312 (462)
T ss_pred ceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhc-cc----------------------
Confidence 1111 11111124677899999887667799999843 2 2 12222111000 00
Q ss_pred cCCCCCccchhhHHHHHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE-EEE
Q 037063 401 KFPESSISGVSSKLVECKGLDH-ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS-LAF 478 (588)
Q Consensus 401 e~GT~~~~~~~~~~al~~aL~~-l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i-v~f 478 (588)
-.+...+.+ .++..+|+. .... ++++.+.+++.++++.+.|.++ +.+..+.. ..++. +.+
T Consensus 313 ~~~~s~~~Q----~a~~~~L~~~~~~~-l~~~~~~l~~~r~~l~~~L~~~---------~~~~~~~~----P~gg~fl~~ 374 (462)
T PLN02187 313 TPDPATIIQ----AALPAILEKADKNF-FAKKNKILKHNVDLVCDRLKDI---------PCVVCPKK----PESCTYLLT 374 (462)
T ss_pred cCCCCHHHH----HHHHHHHhcCcHHH-HHHHHHHHHHHHHHHHHHHhhC---------CCCcCCCC----CCEeEEEEe
Confidence 001111111 233344432 1111 4556666677777888888764 22211111 22333 333
Q ss_pred EeecCCCCCc-CH-HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHH
Q 037063 479 NVFDWNGTRI-DP-ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTY 556 (588)
Q Consensus 479 ~~~~~~g~~i-~~-~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~ 556 (588)
.+.......+ +. +.+.+++.++||.+++|.... ..++|||+++. ..+.++
T Consensus 375 ~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg--------------------------~~~~iRis~~~--~~e~l~ 426 (462)
T PLN02187 375 KLELSLMDNIKDDIDFCVKLAREENLVFLPGDALG--------------------------LKNWMRITIGV--EAHMLE 426 (462)
T ss_pred ecChhhCCCCCCHHHHHHHHHhhCCEEEECccccC--------------------------CCCeEEEEeCC--CHHHHH
Confidence 3421100002 23 445778899999999884320 11289999984 688889
Q ss_pred HHHHHHHHhhhhhhcc
Q 037063 557 RLWAFVSRFLDADFVE 572 (588)
Q Consensus 557 ~li~~l~~~l~~~~~~ 572 (588)
..++.|.++++.....
T Consensus 427 ~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 427 DALERLKGFCTRHAKK 442 (462)
T ss_pred HHHHHHHHHHHHhhhc
Confidence 9999999888765543
No 175
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.82 E-value=5.3e-18 Score=182.12 Aligned_cols=302 Identities=12% Similarity=0.025 Sum_probs=189.5
Q ss_pred HHHHHHHHHHhCCC----CCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 182 SKIRKRIMDFMNIS----EDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 182 ~~~r~~ia~~lga~----~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
.++|+.|+++++.. -+..+|++|+|+|+|+.+++.++ .++||+|++....+. . + ...++..|++++.++++
T Consensus 76 ~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l-~~~gd~Vlv~~p~y~-~--~-~~~~~~~g~~~~~~~~~ 150 (403)
T TIGR01265 76 LAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEAL-ANPGANILVPRPGFP-L--Y-DTRAAFSGLEVRLYDLL 150 (403)
T ss_pred HHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHh-CCCCCEEEEeCCCch-h--H-HHHHHHcCCEEEEecCC
Confidence 47888899988741 12234999999999999999999 689999765443322 1 1 34567789999999875
Q ss_pred C-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcC---C-CCCC
Q 037063 258 W-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALG---S-KDMD 328 (588)
Q Consensus 258 ~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~---~-~d~~ 328 (588)
. .++.+|.+++++++. ++++++++++++|+||..+| +++| ++|+++|+++|+|++..- . ....
T Consensus 151 ~~~~~~~d~~~l~~~~~--------~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~ 222 (403)
T TIGR01265 151 PEKDWEIDLDGLEALAD--------EKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFI 222 (403)
T ss_pred cccCCccCHHHHHHHhC--------cCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCcc
Confidence 3 346789999999887 67899999999999999998 5566 889999999999998321 1 0011
Q ss_pred C-CCCCCCCCcEEEeccCccCCCCCCceEEEEEeC--cc-----hhcccCCCCCCCceEeeecCCCcccccccccccccc
Q 037063 329 T-LGLSLFKPDFLICSFYKIFGENPSGFGCLFVKK--SS-----ASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS 400 (588)
Q Consensus 329 ~-l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~--~~-----~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~ 400 (588)
+ ..+.....-+++.|+.|.|+.+..++|++++.+ +. ++.+......
T Consensus 223 ~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~-------------------------- 276 (403)
T TIGR01265 223 PMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQR-------------------------- 276 (403)
T ss_pred chhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhhh--------------------------
Confidence 1 111111123677799998876456799999853 22 2212111000
Q ss_pred cCCCCCccchhhHHHHHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEE
Q 037063 401 KFPESSISGVSSKLVECKGLDH-ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFN 479 (588)
Q Consensus 401 e~GT~~~~~~~~~~al~~aL~~-l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~ 479 (588)
..+...+.+ .++..+|+. .... +++..+++++.++++.+.|..+ +++++..| ..|..+-+.
T Consensus 277 ~~~~~~~~q----~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~p----~~g~f~~~~ 338 (403)
T TIGR01265 277 ILGPATIVQ----GALPDILENTPQEF-FDGKISVLKSNAELCYEELKDI---------PGLVCPKP----EGAMYLMVK 338 (403)
T ss_pred hcCCChHHH----HHHHHHHHhChHHH-HHHHHHHHHHHHHHHHHHHhcC---------CCceecCC----CceeEEEEe
Confidence 001111111 233344432 1111 4555566666677788877763 34554433 223444444
Q ss_pred eecCC-CCCcCHHHH-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHH
Q 037063 480 VFDWN-GTRIDPALV-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYR 557 (588)
Q Consensus 480 ~~~~~-g~~i~~~~v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~ 557 (588)
++... ....+...+ .+++++.||.+..|..+. .. ++||+|++. ..+.+++
T Consensus 339 ~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~------------------------~~--~~iRis~~~--~~~~l~~ 390 (403)
T TIGR01265 339 LELELFPEIKDDVDFCEKLVREESVICLPGSAFG------------------------LP--NWVRITITV--PESMLEE 390 (403)
T ss_pred ccccccCCCCCHHHHHHHHHHhCCEEEeCccccC------------------------CC--CeEEEEecC--CHHHHHH
Confidence 43210 001234455 555788999999884331 01 289999984 5788888
Q ss_pred HHHHHHHhhhh
Q 037063 558 LWAFVSRFLDA 568 (588)
Q Consensus 558 li~~l~~~l~~ 568 (588)
.++.|.+++++
T Consensus 391 ~l~~l~~~~~~ 401 (403)
T TIGR01265 391 ACSRIKEFCER 401 (403)
T ss_pred HHHHHHHHHHh
Confidence 88888887754
No 176
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.82 E-value=7.2e-18 Score=180.35 Aligned_cols=302 Identities=13% Similarity=0.152 Sum_probs=190.2
Q ss_pred HHHHHHHHHh----CCCCC-CceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 183 KIRKRIMDFM----NISED-DYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~-e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
++|+.+++++ ++..+ +.+|++|+|+++|+.+++.++ +.+||+|++....+... ...++..|++++.++.+
T Consensus 71 ~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~-~~~gd~vl~~~p~y~~~----~~~~~~~g~~~~~~~~~ 145 (391)
T PRK07309 71 ELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAI-LEPGDKVLLPAPAYPGY----EPIVNLVGAEIVEIDTT 145 (391)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCCcch----HHHHHHcCCEEEEEecC
Confidence 5555555554 44221 235999999999999999998 89999977654433322 34556789999999986
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCH---HHH-HHHHHcCcEEEEeCCCcC----CCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSY---MWM-SVAAEKGWHVLLDATALG----SKDMDT 329 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl---~~I-~~a~~~g~~vvvDaa~~~----~~d~~~ 329 (588)
..+..++.++|+++++. ..++++++++++++||||..++. ++| ++|+++|+++|+|.+..- +....+
T Consensus 146 ~~~~~~d~~~l~~~~~~-----~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~ 220 (391)
T PRK07309 146 ENDFVLTPEMLEKAILE-----QGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVS 220 (391)
T ss_pred CcCCcCCHHHHHHHhhc-----cCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCC
Confidence 33457899999999861 11368999999999999999984 445 788999999999998432 100111
Q ss_pred C-CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc
Q 037063 330 L-GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS 408 (588)
Q Consensus 330 l-~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~ 408 (588)
+ .+ ...--+++.|++|.||.+..++|+++.++++++.+...... . ..++..+.
T Consensus 221 ~~~~-~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~~~~---~----------------------~~~~~~~~ 274 (391)
T PRK07309 221 IAEY-LPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQY---L----------------------VTAATTMA 274 (391)
T ss_pred HHHh-ccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHHHhh---c----------------------ccCCChHH
Confidence 1 01 11134788899999985445699999998887765432100 0 00111111
Q ss_pred chhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE-EEeecCCCCC
Q 037063 409 GVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA-FNVFDWNGTR 487 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~-f~~~~~~g~~ 487 (588)
+ .++...|+.-... .....++.+..++++.+.|.++ +++++.| .++... +.+++ +..
T Consensus 275 q----~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~p-----~gg~~~~~~l~~--~~~ 332 (391)
T PRK07309 275 Q----FAAVEALTNGKDD-ALPMKKEYIKRRDYIIEKMTDL----------GFKIIKP-----DGAFYIFAKIPA--GYN 332 (391)
T ss_pred H----HHHHHHHhCChhH-HHHHHHHHHHHHHHHHHHHHHC----------CCeecCC-----CeeEEEEEECCC--CCC
Confidence 1 2222333321010 2334455566677788888763 3444443 234333 34432 111
Q ss_pred cCHHHHH-HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 488 IDPALVQ-KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 488 i~~~~v~-~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
.+...+. +++.++||.+.+|.... . .+..++|++++. +.++++..++.|++++
T Consensus 333 ~~~~~~~~~l~~~~gv~v~pg~~f~----------------~--------~~~~~iRi~~~~--~~~~l~~~i~~l~~~~ 386 (391)
T PRK07309 333 QDSFKFLQDFARKKAVAFIPGAAFG----------------P--------YGEGYVRLSYAA--SMETIKEAMKRLKEYM 386 (391)
T ss_pred CCHHHHHHHHHHhCCEEEeCchhhC----------------C--------CCCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 2344444 67788999998874321 0 122399999874 6889999999999887
Q ss_pred hh
Q 037063 567 DA 568 (588)
Q Consensus 567 ~~ 568 (588)
++
T Consensus 387 ~~ 388 (391)
T PRK07309 387 EE 388 (391)
T ss_pred Hh
Confidence 54
No 177
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=4e-18 Score=180.86 Aligned_cols=289 Identities=10% Similarity=0.056 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
..++|+.|++++++++++ |++|+|+++++.+++..+ +++||.|++....+... ...++..|++++.+|++ .+
T Consensus 69 ~~~Lr~~ia~~~~~~~~~--I~it~G~~~~l~~~~~~~-~~~gd~vlv~~p~y~~~----~~~~~~~g~~~~~vp~~-~~ 140 (369)
T PRK08153 69 NHDLRHALAAHHGVAPEN--IMVGEGIDGLLGLIVRLY-VEPGDPVVTSLGAYPTF----NYHVAGFGGRLVTVPYR-DD 140 (369)
T ss_pred cHHHHHHHHHHhCCCHHH--EEEcCCHHHHHHHHHHHh-cCCCCEEEECCCcchHH----HHHHHHcCCeEEEeeCC-CC
Confidence 358999999999998765 999999999999999998 88999987655433212 23345679999999985 33
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH--cCcEEEEeCCCc--CCC-CCCCCCCCC
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE--KGWHVLLDATAL--GSK-DMDTLGLSL 334 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~--~g~~vvvDaa~~--~~~-d~~~l~l~~ 334 (588)
.++.+++.+.+.. .++++++++.++||||..+|.+++ ++++. +|++||+|.+.. ... ....+. ..
T Consensus 141 -~~~~~~l~~~~~~-------~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~-~~ 211 (369)
T PRK08153 141 -REDLDALLDAARR-------ENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPID-TD 211 (369)
T ss_pred -CCCHHHHHHHhcc-------cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhh-hc
Confidence 4788888766541 578999999999999999999998 66654 389999999832 110 011221 11
Q ss_pred CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHH
Q 037063 335 FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKL 414 (588)
Q Consensus 335 ~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~ 414 (588)
.+.-+++.||.|.+|.+...+|+++.++++++.+....... + .+... .+
T Consensus 212 ~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~~-~---------------------------~s~~~---q~ 260 (369)
T PRK08153 212 DPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNHF-G---------------------------MNRIA---QA 260 (369)
T ss_pred CCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcCC-C---------------------------CCHHH---HH
Confidence 22347788999999854456899999888776554322110 0 11111 12
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHH
Q 037063 415 VECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQ 494 (588)
Q Consensus 415 al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~ 494 (588)
++..+|+. ... ++.+.++.+..++++.+.|+.+ ++.++ | ..+.++.+.+.. + ......+.
T Consensus 261 ~~~~~l~~-~~~-~~~~~~~~~~~r~~~~~~L~~~----------g~~~~-p----~~~~f~~~~~~~-~--~~~a~~l~ 320 (369)
T PRK08153 261 AALAALKD-QAY-LAEVVGKIAAARDRIAAIARAN----------GLTPL-P----SATNFVAIDCGR-D--GAFARAVL 320 (369)
T ss_pred HHHHHhcC-HHH-HHHHHHHHHHHHHHHHHHHHHC----------CCccC-C----CcCcEEEEECCC-C--cccHHHHH
Confidence 33344431 111 4556667777778888877763 22322 2 234555444431 1 12355677
Q ss_pred HHHHhCCcEec-cccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 495 KLADRHNISLS-CGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 495 ~~l~~~gI~v~-~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
+.|.++||.++ +|. . .+..++|+|++ +.+|+++++++|++++.
T Consensus 321 ~~l~~~Gi~v~~p~~-~--------------------------~~~~~iRis~~---~~~~~~~~~~al~~~~~ 364 (369)
T PRK08153 321 DGLIARDIFVRMPGV-A--------------------------PLDRCIRVSCG---PDEELDLFAEALPEALE 364 (369)
T ss_pred HHHHHCCeEEeeCCC-C--------------------------CCCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 77778899996 331 0 11238999987 78999999999998765
No 178
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.82 E-value=3e-17 Score=174.21 Aligned_cols=329 Identities=12% Similarity=0.032 Sum_probs=205.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+++.+.+++++|++ .+++|+|+|+|+.+++.++.+++||+|+ ....|++ . ...+...|++++.+++
T Consensus 30 g~~~~~~e~~la~~~g~~----~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~-~----~~~~~~~G~~~v~vd~ 100 (376)
T TIGR02379 30 GPFSRRCETWLENRTGTK----KALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVS-T----ANAFVLRGAKIVFVDI 100 (376)
T ss_pred cHHHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHH-H----HHHHHHcCCEEEEEec
Confidence 356778899999999884 3999999999999999988789999966 4556654 2 2233567999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC--CCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS--KDMDTLGLS 333 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~--~d~~~l~l~ 333 (588)
+..++.+|+++++++++ +++++|+.. +++|...|+++| ++|+++|++||+|+++..+ .+..+++-
T Consensus 101 d~~~~~~d~~~le~~i~--------~~tk~Iip~---~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~- 168 (376)
T TIGR02379 101 RPDTMNIDETLIESAIT--------HRTKAIVPV---HYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGS- 168 (376)
T ss_pred CCCcCCCCHHHHHHhcC--------cCceEEEEe---CCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCcccCC-
Confidence 85556799999999988 688998754 569999999999 9999999999999998775 22223331
Q ss_pred CCCCcEEEeccCc--cCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC-ccc
Q 037063 334 LFKPDFLICSFYK--IFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS-ISG 409 (588)
Q Consensus 334 ~~~~D~vv~S~~K--~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~-~~~ 409 (588)
-.|+.++|||+ .+..++. .|+++.+ +++.++++.....| ....... . .... ...+...|+.. +..
T Consensus 169 --~~~~~~fSf~~~K~l~~g~~-gG~v~~~~~~~~~~~~~~~~~g-~~~~~~~--~---~~~~--~~~~~~~g~n~~~~~ 237 (376)
T TIGR02379 169 --IGHLGTFSFHETKNYTSGGE-GGALLINDQAFIERAEIIREKG-TNRSQFF--R---GEVD--KYTWRDIGSSYLPSE 237 (376)
T ss_pred --CCCEEEEeCCCCCcCcccCC-ceEEEECCHHHHHHHHHHHHhC-CCCcccc--c---cCCC--cceeeeecccCCccH
Confidence 13889999986 3442133 4776666 56667776554321 1100000 0 0000 00111223221 222
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc--cEEEEEeecCCCCC
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG--PSLAFNVFDWNGTR 487 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg--~iv~f~~~~~~g~~ 487 (588)
+ . ...++..++. ++.+.++.++++++..+.|..+.+. .++++..... .... ..+.+.+.. +
T Consensus 238 ~---~-Aa~g~~qL~~--l~~~~~~r~~~~~~y~~~L~~~~~~------~~~~~~~~~~-~~~~~~~~~~i~~~~--~-- 300 (376)
T TIGR02379 238 L---Q-AAYLWAQLEQ--ADRINQDRLATWQLYQDALKPLEEK------GIIELPSIPN-GCQHNAHMFYIKLKD--E-- 300 (376)
T ss_pred H---H-HHHHHHHHHH--hHHHHHHHHHHHHHHHHHhccCCcC------CeeeCCCCCC-CCeeeeEEEEEEECC--c--
Confidence 2 1 2244555555 4777788888888899988775211 1122211111 1111 233333322 1
Q ss_pred cCHHHHHHHHHhCCcEeccccccCccccc--ch-----HHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 488 IDPALVQKLADRHNISLSCGFLQNIFFSG--EY-----EQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 488 i~~~~v~~~l~~~gI~v~~G~~c~~~~~~--~~-----~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
.+.+.+.+.|.++||..+.+....+.... .+ .......+. ...|.+-++...+.+||+++++
T Consensus 301 ~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~-----------~~~l~LP~~~~l~~~~~~~i~~ 369 (376)
T TIGR02379 301 DDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKES-----------ERLVRLPLYYGLSKEDQARVIQ 369 (376)
T ss_pred CCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHH-----------hceEEccCCCCCCHHHHHHHHH
Confidence 35788999999999988754321110000 00 000011111 1279999999999999999999
Q ss_pred HHHHhh
Q 037063 561 FVSRFL 566 (588)
Q Consensus 561 ~l~~~l 566 (588)
.|++++
T Consensus 370 ~i~~~~ 375 (376)
T TIGR02379 370 TICDYL 375 (376)
T ss_pred HHHHHh
Confidence 999864
No 179
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.82 E-value=1.4e-17 Score=177.83 Aligned_cols=324 Identities=14% Similarity=0.078 Sum_probs=198.9
Q ss_pred cCCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEE
Q 037063 173 YGSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVS 252 (588)
Q Consensus 173 ~g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~ 252 (588)
||. .....++++++|+++|.+ ..++|++|.++.+ .++.++ +++||+|+++...|...... +...+++++
T Consensus 39 yg~--~~~~~~LE~~lA~~~g~e---~al~~~sG~~a~~-~~i~~l-~~~GD~Vl~~~~~h~s~~~~----~~l~~~~~~ 107 (392)
T PLN03227 39 YGT--IDAHLELEQCMAEFLGTE---SAILYSDGASTTS-STVAAF-AKRGDLLVVDRGVNEALLVG----VSLSRANVR 107 (392)
T ss_pred cCC--hHHHHHHHHHHHHHhCCC---cEEEecCcHHHHH-HHHHHh-CCCCCEEEEeccccHHHHHH----HHHcCCeEE
Confidence 454 347889999999999984 3588888888877 555557 89999977655444323332 233467777
Q ss_pred EEeccCCCCccCHHHHHHHHhhhcc------ccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC
Q 037063 253 SAEFAWPNLRIHSGKLMKKIVGKRK------KKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK 325 (588)
Q Consensus 253 ~v~~~~~~~~i~~e~l~~~i~~~~~------~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~ 325 (588)
.++.. |.+++++.+..-+. ....+++++|++..+.|++|.+.|+++| ++|+++|+++++|.++..+.
T Consensus 108 ~~~~~------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~ 181 (392)
T PLN03227 108 WFRHN------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGT 181 (392)
T ss_pred EeCCC------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccc
Confidence 76653 34555554431000 0012478999999999999999999999 99999999999999987552
Q ss_pred CC-------CCCCCC-CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccccc
Q 037063 326 DM-------DTLGLS-LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDES 397 (588)
Q Consensus 326 d~-------~~l~l~-~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~ 397 (588)
.- ..+++. ..++|+++.|++|.+| |.| |++..++++++.++....+ .
T Consensus 182 ~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g--~~g-g~v~~~~~~~~~~~~~~~~---~------------------- 236 (392)
T PLN03227 182 LGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG--SVG-GMTVGSEEVVDHQRLSGSG---Y------------------- 236 (392)
T ss_pred cCCCCCcHHHHcCCCCCCCceEEEeechhhhh--ccC-cEEecCHHHHHHHHHhCcC---c-------------------
Confidence 10 112221 1246999999999888 553 6777787776554422111 0
Q ss_pred ccccCCC-CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE
Q 037063 398 SQSKFPE-SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL 476 (588)
Q Consensus 398 ~f~e~GT-~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv 476 (588)
.| .+. +++.. ++...+++.+.+ .+.+.++.+.+.+++++.|++..++. +..++-.........++|+
T Consensus 237 ~~--~~~~~p~~~----~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~----~~~~rg~~~~~~~~~~~i~ 304 (392)
T PLN03227 237 CF--SASAPPFLA----KADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPY----ALKLRNRLVITSDPISPII 304 (392)
T ss_pred cc--cCCCCHHHH----HHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcc----ccccccccccCCCCCCCEE
Confidence 11 111 12122 222345544333 25677888899999999998642221 0011100000012357888
Q ss_pred EEEeecCCCCC-c----CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCC
Q 037063 477 AFNVFDWNGTR-I----DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTN 551 (588)
Q Consensus 477 ~f~~~~~~g~~-i----~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t 551 (588)
.+.+.+..... . ....+.+.+.++||.+.....+. . .. .. ......||++++..+|
T Consensus 305 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~-~--~~---------~~-------~~P~~~iR~~~~~~~t 365 (392)
T PLN03227 305 YLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHV-K--KF---------LQ-------LVPPPCLRVVANASHT 365 (392)
T ss_pred EEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEeccccc-C--Cc---------CC-------CCCCceEEEEecCCCC
Confidence 88885421000 0 01356677778899886311110 0 00 00 0111289999999999
Q ss_pred HHHHHHHHHHHHHhhhhh
Q 037063 552 FEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 552 ~eDv~~li~~l~~~l~~~ 569 (588)
.|||+++++.|++.+++-
T Consensus 366 ~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 366 REDIDKLLTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999988663
No 180
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.82 E-value=1.1e-17 Score=176.68 Aligned_cols=287 Identities=16% Similarity=0.144 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCC-
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWP- 259 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~- 259 (588)
..++|+.|++++++++++ |++|+|+++++.+++.++ .+ ++|++....+. .....++..|++++.++.+.+
T Consensus 56 ~~~lr~~ia~~~~~~~~~--i~it~Ga~~~l~~~~~~~--~~-~~v~i~~P~y~----~~~~~~~~~g~~~~~~~~~~~~ 126 (354)
T PRK06358 56 YLELRKRIASFEQLDLEN--VILGNGATELIFNIVKVT--KP-KKVLILAPTFA----EYERALKAFDAEIEYAELTEET 126 (354)
T ss_pred HHHHHHHHHHHhCCChhh--EEECCCHHHHHHHHHHHh--CC-CcEEEecCChH----HHHHHHHHcCCeeEEEeCcccc
Confidence 368999999999998776 999999999999999986 34 46555444332 124456778999999998632
Q ss_pred CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCc--C--CCCCCCCC
Q 037063 260 NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATAL--G--SKDMDTLG 331 (588)
Q Consensus 260 ~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~--~--~~d~~~l~ 331 (588)
...+| +++.+.+. .+++++++++++||||..++.++ | ++|+++|+++|+|.+-. . +.....+.
T Consensus 127 ~~~~d-~~~~~~~~--------~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~ 197 (354)
T PRK06358 127 NFAAN-EIVLEEIK--------EEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMIN 197 (354)
T ss_pred CCCcc-HHHHHhhc--------cCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHH
Confidence 23577 66666665 56899999999999999999555 5 77889999999999832 1 10001111
Q ss_pred -CCCCCCcEEEeccCccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccc
Q 037063 332 -LSLFKPDFLICSFYKIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISG 409 (588)
Q Consensus 332 -l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~ 409 (588)
++...--+++.|+.|.||++..++|++++. +.+++.+...... +. .+...
T Consensus 198 ~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~--~~--------------------------~~~~~ 249 (354)
T PRK06358 198 YLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREP--WS--------------------------INTFA 249 (354)
T ss_pred hccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCC--Cc--------------------------chHHH
Confidence 112223377889999999656779999885 4555544332211 00 01000
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcC
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRID 489 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~ 489 (588)
..+...+|+.-.. +++..++.+..++++.+.|+++ +++.++.| .++.+-+.+.+
T Consensus 250 ---q~~~~~~l~~~~~--~~~~~~~~~~~r~~l~~~L~~~---------~~~~~~~~-----~g~f~~~~~~~------- 303 (354)
T PRK06358 250 ---DLAGQTLLDDKEY--IKKTIQWIKEEKDFLYNGLSEF---------KGIKVYKP-----SVNFIFFKLEK------- 303 (354)
T ss_pred ---HHHHHHHhccHHH--HHHHHHHHHHHHHHHHHHHhcC---------CCcEEcCC-----cceEEEEEcCc-------
Confidence 0222344421111 3555566677778888888764 45666543 34555455443
Q ss_pred HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 490 PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 490 ~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
...+.+.|.++||.++.|.... . .+..+||+|++ +.++.++|+++|.+++
T Consensus 304 ~~~~~~~l~~~gI~v~~~~~f~----------------~--------~~~~~iRls~~---~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 304 PIDLRKELLKKGILIRSCSNYR----------------G--------LDENYYRVAVK---SREDNKKLLKALEVIL 353 (354)
T ss_pred hHHHHHHHHHCCeEEEECCCCC----------------C--------CCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 3556666777899999874320 0 12238999987 7899999999998865
No 181
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=1.5e-17 Score=178.89 Aligned_cols=161 Identities=12% Similarity=0.107 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
...++++++|+++.|.+ . .++++++++|+.+++.++ +++||+|++ ...|+. .+..+.......|+++.+++.
T Consensus 58 pt~~~Le~~lA~l~g~~--~--~l~~ssG~~Ai~~al~al-~~~Gd~Vl~~~~~Y~~-t~~~~~~~l~~~gi~v~~~d~- 130 (425)
T PRK06084 58 PTNDVLEQRVAALEGGV--G--ALAVASGMAAITYAIQTI-AEAGDNIVSVAKLYGG-TYNLLAHTLPRIGIETRFAAH- 130 (425)
T ss_pred chHHHHHHHHHHHhCCC--c--eeEehhHHHHHHHHHHHH-hCCCCEEEEeCCCcch-HHHHHHHhcccceeEEEEECC-
Confidence 34568999999999963 2 667888889999999998 899999764 455554 233333333446888877754
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFK 336 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~ 336 (588)
.|+++++++|+ +++++|++++++|++|...|+++| ++|+++|++||+|+++..|....++. +.
T Consensus 131 -----~d~e~le~ai~--------~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p~~---~g 194 (425)
T PRK06084 131 -----DDIAALEALID--------ERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLCRPFE---HG 194 (425)
T ss_pred -----CCHHHHHHHhc--------cCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCChhh---cC
Confidence 37899999998 689999999999999999999999 99999999999999988774333332 34
Q ss_pred CcEEEeccCccCCCCCCceEEEEEeC
Q 037063 337 PDFLICSFYKIFGENPSGFGCLFVKK 362 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G~G~L~v~~ 362 (588)
+|+++.|++|++|.+...+|.+++.+
T Consensus 195 aDivv~S~tK~l~G~g~~~gG~v~~~ 220 (425)
T PRK06084 195 ADIVVHSLTKYIGGHGTSIGGIVVDS 220 (425)
T ss_pred CCEEEECchhcccccccceeEEEEeC
Confidence 99999999998873223456666643
No 182
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.81 E-value=3.6e-18 Score=180.22 Aligned_cols=296 Identities=14% Similarity=0.118 Sum_probs=185.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.....+++++|+++.|.+ .++.++|+++|+.+++. + +++||+|++. ..|.. ...++.......+.++.+
T Consensus 53 ~p~~~~le~~lA~leg~~----~~v~~~sG~aAi~~~l~-~-l~~GD~VI~~~~~yg~-~~~~~~~~~~~~~~~~~~--- 122 (364)
T PRK07269 53 NPTRAKLEETLAAIESAD----YALATSSGMSAIVLAFS-V-FPVGSKVVAVRDLYGG-SFRWFNQQEKEGRFHFTY--- 122 (364)
T ss_pred CccHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHH-H-hCCCCEEEEecCCcCc-hHHHHHHHHhcCcEEEEe---
Confidence 344678999999999863 38999999999999885 4 6899996644 44443 444443333332332222
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
..|+++++++|+ ++|++|++.+++|++|...|+++| ++|+++|+++++|++...|....+++ .
T Consensus 123 -----~~d~~~l~~~i~--------~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~~pl~---~ 186 (364)
T PRK07269 123 -----ANTEEELIAAIE--------EDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRPIE---L 186 (364)
T ss_pred -----cCCHHHHHHhcC--------cCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCchh---h
Confidence 247889999998 789999999999999999999999 99999999999999976663334443 3
Q ss_pred CCcEEEeccCccCCCCCCc--eEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 336 KPDFLICSFYKIFGENPSG--FGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
.+|+++.|++|++|. +.. .|+++.++ ++.+++...... .| ...+...
T Consensus 187 gaDivv~S~tK~l~g-~~d~~gG~v~~~~~~l~~~~~~~~~~-~G-------------------------~~~s~~~--- 236 (364)
T PRK07269 187 GADIVLHSATKYLSG-HNDVLAGVVVTNDLELYEKLFYNLNT-TG-------------------------AVLSPFD--- 236 (364)
T ss_pred CCcEEEecCceeccC-CCcccceEEEeCcHHHHHHHHHHHHH-hC-------------------------CCCCHHH---
Confidence 499999999998872 332 56667654 444444311100 01 0111111
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCCCCcccEEEEEeecCCCCCcCHH
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVMFDRGPSLAFNVFDWNGTRIDPA 491 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~ 491 (588)
...++..++. ++...++.++.+.++.+.|++. |.| +++-| ..|++++|.+.+ .+
T Consensus 237 ---a~l~~~~L~t--L~~r~~~~~~na~~~a~~L~~~---------p~v~~v~yp----g~gg~~sf~~~~-------~~ 291 (364)
T PRK07269 237 ---SYLLMRGLKT--LSLRMERSTANAQEVVAFLKKS---------PAVKEVLYT----GKGGMISFKVAD-------ET 291 (364)
T ss_pred ---HHHHHcCCCc--HHHHHHHHHHHHHHHHHHHHhC---------CCccEEeCC----CcCcEEEEEECC-------HH
Confidence 1122222332 4556666677777777777762 433 45545 358999999853 34
Q ss_pred HHHHHHHhCCc---Eecccc----ccCcccccchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCCCCCHHHHHHHHHHH
Q 037063 492 LVQKLADRHNI---SLSCGF----LQNIFFSGEYEQERVRVLETRSGTNETRSGV--SVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 492 ~v~~~l~~~gI---~v~~G~----~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~~t~eDv~~li~~l 562 (588)
.+.++++...+ ..+-|. .++|.....+. ........ .|+ +.||+|+|. ||++.|++-|
T Consensus 292 ~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~--~~~~~r~~-------~Gi~~~liRlsvGl----E~~~dli~dl 358 (364)
T PRK07269 292 RIPHILNSLKVFTFAESLGGVESLITYPTTQTHAD--IPAEVRHS-------YGLTDDLLRLSIGI----EDARDLIADL 358 (364)
T ss_pred HHHHHHHhCCcceEccCCCCcCeEeeCCccccccc--CCHHHHHh-------cCCCCCeEEEEecc----CCHHHHHHHH
Confidence 44555554333 233332 22232211110 00011111 333 389999997 8899999888
Q ss_pred HHhhh
Q 037063 563 SRFLD 567 (588)
Q Consensus 563 ~~~l~ 567 (588)
.+.|+
T Consensus 359 ~~al~ 363 (364)
T PRK07269 359 KQALE 363 (364)
T ss_pred HHHhc
Confidence 87664
No 183
>PLN02656 tyrosine transaminase
Probab=99.81 E-value=6.5e-18 Score=181.75 Aligned_cols=303 Identities=11% Similarity=0.035 Sum_probs=191.0
Q ss_pred HHHHHHHHHHhC------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 182 SKIRKRIMDFMN------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 182 ~~~r~~ia~~lg------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++|+.++++++ ++++ +|++|+|+++|+.+++.++ +++||+|++....+. .+ ...++..|++++.++
T Consensus 76 ~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~-~~---~~~~~~~g~~~~~i~ 148 (409)
T PLN02656 76 PQARRAIAEYLSRDLPYKLSLD--DVFITSGCTQAIDVALSML-ARPGANILLPRPGFP-IY---ELCAAFRHLEVRYVD 148 (409)
T ss_pred HHHHHHHHHHHHHhcCCCCCcc--cEEEeCChHHHHHHHHHHH-hCCCCeEEEeCCCCC-cH---HHHHHHcCCEEEEEe
Confidence 367777777763 4444 4999999999999999998 799999765443332 12 234456799999999
Q ss_pred ccCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCc--C--CCC
Q 037063 256 FAWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATAL--G--SKD 326 (588)
Q Consensus 256 ~~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~--~--~~d 326 (588)
++.+ ++.+|.++++++++ ++++++++++++|+||..++.++ | ++|+++|++||+|++.. . +..
T Consensus 149 ~~~~~~~~~d~~~l~~~~~--------~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~ 220 (409)
T PLN02656 149 LLPEKGWEVDLDAVEALAD--------QNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNP 220 (409)
T ss_pred CCCcCCCCCCHHHHHHHhc--------cCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCC
Confidence 8533 35689999999887 67899999999999999997554 5 78899999999999832 1 111
Q ss_pred CCCC-CCCCCCCcEEEeccCccCCCCCCceEEEEEeC--------cchhcccCCCCCCCceEeeecCCCccccccccccc
Q 037063 327 MDTL-GLSLFKPDFLICSFYKIFGENPSGFGCLFVKK--------SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDES 397 (588)
Q Consensus 327 ~~~l-~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~--------~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~ 397 (588)
..++ .+.....-+++.||.|.|+.+..++|+++..+ ++++.+......
T Consensus 221 ~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~----------------------- 277 (409)
T PLN02656 221 FVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDI----------------------- 277 (409)
T ss_pred cccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHHhh-----------------------
Confidence 1111 11111234678899998776567799999852 344433221100
Q ss_pred ccccCCCCCccchhhHHHHHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE
Q 037063 398 SQSKFPESSISGVSSKLVECKGLDH-ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL 476 (588)
Q Consensus 398 ~f~e~GT~~~~~~~~~~al~~aL~~-l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv 476 (588)
..+...+.+ .++..+|+. -+.. +++..++.++.++++.+.|..+ +.+....+ ..|+..
T Consensus 278 ---~~~~s~~~q----~a~~~~l~~~~~~~-~~~~~~~~~~~r~~~~~~L~~~---------~~~~~~~~----p~gg~~ 336 (409)
T PLN02656 278 ---LGGPATFIQ----AAVPTILEQTDESF-FKKTINILKQSSDICCDRIKEI---------PCITCPHK----PEGSMA 336 (409)
T ss_pred ---hcCCCHHHH----HHHHHHHhcCcHHH-HHHHHHHHHHHHHHHHHHHhhC---------CCCcCCcC----CCeEEE
Confidence 001111111 233344431 0111 4556666777778888888764 22211111 234443
Q ss_pred EE-EeecC-CCCCcCH-HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHH
Q 037063 477 AF-NVFDW-NGTRIDP-ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFE 553 (588)
Q Consensus 477 ~f-~~~~~-~g~~i~~-~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~e 553 (588)
.+ .+... .....+. +.+.+++.+.||.+.+|..+. ..+++|++++. +.|
T Consensus 337 ~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg--------------------------~~~~iRi~~~~--~~e 388 (409)
T PLN02656 337 VMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVG--------------------------LKNWLRITFAA--DPS 388 (409)
T ss_pred EEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcC--------------------------CCCeEEEEeCC--CHH
Confidence 33 33210 0000123 346788889999999884431 11289999994 789
Q ss_pred HHHHHHHHHHHhhhhhhc
Q 037063 554 DTYRLWAFVSRFLDADFV 571 (588)
Q Consensus 554 Dv~~li~~l~~~l~~~~~ 571 (588)
+++..++.|++++...+.
T Consensus 389 ~l~eal~rl~~~~~~~~~ 406 (409)
T PLN02656 389 SLEEALGRIKSFYLRHSK 406 (409)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 999999999888776553
No 184
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.81 E-value=5.2e-18 Score=181.28 Aligned_cols=298 Identities=11% Similarity=0.013 Sum_probs=190.3
Q ss_pred HHHHHHHHHh----C--CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 183 KIRKRIMDFM----N--ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 183 ~~r~~ia~~l----g--a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++|+.|++++ | ++++ ..|++|+|+++|+.+++..+ ..+||+|++....+..+ ...++..|++++.+++
T Consensus 72 ~lr~aia~~~~~~~g~~~~~~-~~I~it~Gs~~al~~~~~~l-~~~gd~Vlv~~P~y~~~----~~~~~~~g~~~~~v~~ 145 (388)
T PRK07366 72 DFREAAAQWYEQRFGLAVDPE-TEVLPLIGSQEGTAHLPLAV-LNPGDFALLLDPGYPSH----AGGVYLAGGQIYPMPL 145 (388)
T ss_pred HHHHHHHHHHHHhhCCcCCCc-CeEEECCCcHHHHHHHHHHh-CCCCCEEEEcCCCCcch----HHHHHhcCCEEEEEEC
Confidence 5677777766 5 4444 14999999999999999998 88999977655543322 3455678999999999
Q ss_pred cCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCC--cC--CCC-
Q 037063 257 AWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATA--LG--SKD- 326 (588)
Q Consensus 257 ~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~--~~--~~d- 326 (588)
+.+ ...++.+++++.+. +++++|+++.++||||..++.+++ ++|+++|++||+|.+- +. +..
T Consensus 146 ~~~~~~~~d~~~l~~~~~--------~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~ 217 (388)
T PRK07366 146 RAENDFLPVFADIPTEVL--------AQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVE 217 (388)
T ss_pred CCccCCCCCHHHHHHhhc--------ccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCC
Confidence 732 24567788877776 578999999999999999998875 5789999999999972 11 110
Q ss_pred CCC-CCCCCC-CCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 327 MDT-LGLSLF-KPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 327 ~~~-l~l~~~-~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
... ..+... ..-+++.||.|.||.+..++|+++.++++++.+....... ..++
T Consensus 218 ~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~~~~~-------------------------~~~~ 272 (388)
T PRK07366 218 PPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQVKAVV-------------------------DFNQ 272 (388)
T ss_pred CCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHHHHHHhhc-------------------------ccCC
Confidence 111 122111 1236778999999865677999999888877665332110 0011
Q ss_pred CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCC
Q 037063 405 SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWN 484 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~ 484 (588)
.+... .++..++..-++. ++++.++.+..++++.+.|.++ ++.+..| ..|..+-+.+++.-
T Consensus 273 ~~~~~----~~a~~~l~~~~~~-l~~~~~~~~~~r~~l~~~L~~~----------~~~~~~p----~~g~f~~~~~~~~~ 333 (388)
T PRK07366 273 YRGIL----NGAIAALTGPQAT-VQQTVQIFRQRRDAFINALHQI----------GWPVPLP----EATMYVWAKLPEPW 333 (388)
T ss_pred CHHHH----HHHHHHHhCcHHH-HHHHHHHHHHHHHHHHHHHHHC----------CCcccCC----CeeEEEEEECCccc
Confidence 11011 1222333211121 4566677777778888888764 2333222 12334444443210
Q ss_pred CCCcCHHHH-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 485 GTRIDPALV-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 485 g~~i~~~~v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
..+...+ .++++++||.++.|..+. . .+.++||+|++. +.++++..++.|+
T Consensus 334 --~~~~~~~~~~l~~~~gv~v~pg~~f~----------------~--------~~~~~iRi~~~~--~~~~l~~~l~rl~ 385 (388)
T PRK07366 334 --QGNSVEFCTQLVAQTGVAASPGSGFG----------------K--------SGEGYVRFALVH--DPDILEEAVERIA 385 (388)
T ss_pred --CCCHHHHHHHHHHhCCEEEeCchHhC----------------c--------CCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 0123444 566688999999884321 0 112389999873 6899999999988
Q ss_pred Hhh
Q 037063 564 RFL 566 (588)
Q Consensus 564 ~~l 566 (588)
++|
T Consensus 386 ~~l 388 (388)
T PRK07366 386 AFL 388 (388)
T ss_pred HhC
Confidence 764
No 185
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.81 E-value=1.1e-17 Score=175.11 Aligned_cols=283 Identities=13% Similarity=0.068 Sum_probs=184.6
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
..++|+.|+++++.+++. |++|+|+++++.+++. + +++|+.|+. ...+. .....++..|++++.+|++ +
T Consensus 42 ~~~lr~~ia~~~~~~~~~--I~it~Gs~~~l~~~~~-~-~~~~~vv~~-~P~y~----~y~~~~~~~G~~v~~vp~~-~- 110 (332)
T PRK06425 42 YTDIEDQIKIYTQGLKIK--VLIGPGLTHFIYRLLS-Y-INVGNIIIV-EPNFN----EYKGYAFTHGIRISALPFN-L- 110 (332)
T ss_pred HHHHHHHHHHHhCCCcce--EEECCCHHHHHHHHHH-H-hCCCcEEEe-CCChH----HHHHHHHHcCCeEEEEeCC-c-
Confidence 468999999999998776 9999999999999997 4 567654444 33222 2256678889999999986 2
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCC--cCCCCCCC-CCC-
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATA--LGSKDMDT-LGL- 332 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~--~~~~d~~~-l~l- 332 (588)
..++.+. +.. .++++|++++++||||..++.+++ +.|+++|++||+|.+- +......+ ..+
T Consensus 111 ~~~~~~~----l~~-------~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~ 179 (332)
T PRK06425 111 INNNPEI----LNN-------YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLN 179 (332)
T ss_pred ccCcHHH----Hhh-------cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHh
Confidence 2334333 321 468899999999999999997764 5678899999999982 22100001 111
Q ss_pred CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 333 SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 333 ~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
...+--+++.||.|.+|++..++|+++.++++++.+...... +. .+....
T Consensus 180 ~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~--~~--------------------------~~~~~~-- 229 (332)
T PRK06425 180 RSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEP--WS--------------------------VCDPAI-- 229 (332)
T ss_pred ccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCC--Cc--------------------------cCHHHH--
Confidence 112234677899999996456699999998887766543211 00 000000
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHH
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~ 492 (588)
.++. ..+ .+.. +++..+..++.++++.+.|.++ +++++.+ ..|..+.+.+++ ...
T Consensus 230 -~~l~-~~~-~~~~-~~~~~~~~~~~r~~l~~~L~~~----------g~~~~~~----~~g~f~~~~~~~-------~~~ 284 (332)
T PRK06425 230 -DFIR-SID-LDYV-AKHSLDIMENERSYLINNLEAM----------GFRAAGD----PSANFITFMIPD-------AHD 284 (332)
T ss_pred -HHHH-Hhh-hHHH-HHHHHHHHHHHHHHHHHHHHHC----------CCEECCC----CCceEEEEEcCC-------HHH
Confidence 1111 111 1111 2455666677778888888874 3455433 235555555532 456
Q ss_pred HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 493 VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 493 v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
+.+.|.++||.++.|.... ..|.++||+|++ +.+|.++|+++|+++++
T Consensus 285 ~~~~l~~~gi~v~~~~~f~------------------------~~~~~~iRis~~---~~~~~~~l~~al~~~~~ 332 (332)
T PRK06425 285 FYSYLLKNGILVRLLDDYE------------------------CLGEQYIRIAIR---RRSFNIKLVNALRNFLN 332 (332)
T ss_pred HHHHHHHCCeEEEECCCCC------------------------CCCCCEEEEEeC---CHHHHHHHHHHHHHHhC
Confidence 6666667899999874320 012239999998 78999999999998763
No 186
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=8.3e-18 Score=178.42 Aligned_cols=287 Identities=12% Similarity=0.104 Sum_probs=192.0
Q ss_pred HHHHHHHHHHh------CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 182 SKIRKRIMDFM------NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 182 ~~~r~~ia~~l------ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++|+.|++++ ++++++ |++|+|+++++.+++..+ .++||+|++....+.. ....++..|++++.++
T Consensus 68 ~~lr~aia~~~~~~~~~~~~~~~--I~it~G~~~~l~~~~~~~-~~~gd~v~v~~P~y~~----~~~~~~~~g~~~~~~~ 140 (368)
T PRK03317 68 VALRADLAAYLTAQTGVGLTVEN--VWAANGSNEILQQLLQAF-GGPGRTALGFVPSYSM----HPIIARGTHTEWVEGP 140 (368)
T ss_pred HHHHHHHHHHhhhhccCCCChhh--EEECCCHHHHHHHHHHHh-cCCCCEEEEeCCChHH----HHHHHHhcCCeeEEcc
Confidence 47888888888 455554 999999999999999999 7999997765444331 2345567889888887
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC-CC--CCCCC
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS-KD--MDTLG 331 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~-~d--~~~l~ 331 (588)
.+ ++..+|.+++++++.. .++++++++.++||||..+|.+++ ++++..++++|+|.+...- .+ ...+.
T Consensus 141 ~~-~~~~~d~~~l~~~~~~-------~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~ 212 (368)
T PRK03317 141 RA-ADFTLDVDAAVAAIAE-------HRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALT 212 (368)
T ss_pred cC-CCCCCCHHHHHHHHhc-------cCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHH
Confidence 65 5567899999999862 467899999999999999999999 8998889999999985421 00 11111
Q ss_pred C-CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 332 L-SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 332 l-~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
+ ...+-.+++.|+.|.+|.+...+|+++.++++++.+...... . +...+.+
T Consensus 213 ~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~~--~-------------------------~~s~~~~- 264 (368)
T PRK03317 213 LLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRLP--Y-------------------------HLSAVTQ- 264 (368)
T ss_pred HHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcCCC--C-------------------------CCCHHHH-
Confidence 1 111223567799999985344589999988887766532211 0 0011111
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCH
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDP 490 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~ 490 (588)
+++..+|+..+. +.+..+++...++++.+.|.++ ++.++.+ .++++.|.-.. +.
T Consensus 265 ---~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~-----~~~~~~~~~~~------~~ 318 (368)
T PRK03317 265 ---AAARAALRHADE--LLASVAALRAERDRVVAWLREL----------GLRVAPS-----DANFVLFGRFA------DR 318 (368)
T ss_pred ---HHHHHHhhCHHH--HHHHHHHHHHHHHHHHHHHHHC----------CCEeCCC-----CCcEEEEeccC------CH
Confidence 233455544332 2333344566666777777763 3444432 34554442111 35
Q ss_pred HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 491 ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 491 ~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
..+.+.+.++||.++.... .+ ++|++++ +.++++++++.|+++++.+
T Consensus 319 ~~~~~~l~~~Gv~v~~~~~---------------------------~~--~iRi~~~---~~~~~~~~~~~l~~~~~~~ 365 (368)
T PRK03317 319 HAVWQGLLDRGVLIRDVGI---------------------------PG--WLRVTIG---TPEENDAFLAALAEVLATE 365 (368)
T ss_pred HHHHHHHHHCCEEEEeCCC---------------------------CC--eEEEecC---CHHHHHHHHHHHHHHHHHh
Confidence 6677778889999874200 12 8999987 7899999999999887653
No 187
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.81 E-value=1.5e-17 Score=178.07 Aligned_cols=292 Identities=15% Similarity=0.155 Sum_probs=186.7
Q ss_pred HHHHHHHHHHhC------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 182 SKIRKRIMDFMN------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 182 ~~~r~~ia~~lg------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++|+.|+++++ +++++ |++|+|+++++++++.++ +++||+|++....+.. + ...++..|++++.++
T Consensus 76 ~~lr~~ia~~l~~~~~~~~~~~~--i~~t~G~~~al~~~~~~l-~~~gd~Vli~~p~~~~---~-~~~~~~~g~~v~~v~ 148 (394)
T PRK06836 76 PEVREAIAESLNRRFGTPLTADH--IVMTCGAAGALNVALKAI-LNPGDEVIVFAPYFVE---Y-RFYVDNHGGKLVVVP 148 (394)
T ss_pred HHHHHHHHHHHHHHhCCCCCcCc--EEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCCcc---H-HHHHHHcCCEEEEEe
Confidence 467777777764 45554 999999999999999998 8999997755443321 2 345577899999999
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHH------cCcEEEEeCCCc-C-
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAE------KGWHVLLDATAL-G- 323 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~------~g~~vvvDaa~~-~- 323 (588)
.+..++.+|.++++++++ +++++|++++++|+||..+|.+++ ++|++ +|+++|+|.+.. +
T Consensus 149 ~~~~~~~~d~~~l~~~~~--------~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~ 220 (394)
T PRK06836 149 TDTDTFQPDLDALEAAIT--------PKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIV 220 (394)
T ss_pred cCCccCcCCHHHHHhhcC--------cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccc
Confidence 974446799999999997 679999999999999999997775 56788 899999999832 1
Q ss_pred --CCCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhc--ccCCC-CCCCceEeeecCCCcccccccccccc
Q 037063 324 --SKDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASV--LSGST-SSVSTIMGIEPSFSEIIELETLDESS 398 (588)
Q Consensus 324 --~~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~--l~~~~-~g~~g~v~~~~~~~~~~~~~~~~~~~ 398 (588)
+.....+ ++...-.+++.|++|.||.+..++|++++.++..+. +.... ... ... .
T Consensus 221 ~~~~~~~~~-~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~-~~~------------------~ 280 (394)
T PRK06836 221 YDGAEVPYI-FKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAALVFAN-RIL------------------G 280 (394)
T ss_pred cCCCCCCCh-HHccCcEEEEecchhhccCcceeeEEEecCHHHhhhHHHHHHHHHHh-hcc------------------c
Confidence 1001111 122224688899999998534569999998765321 11000 000 000 0
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEE
Q 037063 399 QSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAF 478 (588)
Q Consensus 399 f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f 478 (588)
...++++.+ .++... +.. +. ..++.+...+.+.+.|.++ ++++..| .++...+
T Consensus 281 --~~~~~~~~q----~~~~~~---l~~-~~--~~~~~~~~r~~l~~~L~~~----------g~~~~~~-----~gg~~~~ 333 (394)
T PRK06836 281 --FVNAPALMQ----RVVAKC---LDA-TV--DVSIYKRNRDLLYDGLTEL----------GFECVKP-----QGAFYLF 333 (394)
T ss_pred --cccCCHHHH----HHHHHH---hCC-hH--HHHHHHHHHHHHHHHHHhC----------CCEeecC-----CceEEEE
Confidence 000111111 111122 211 11 1233444556666777653 2444433 3444433
Q ss_pred -EeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHH
Q 037063 479 -NVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYR 557 (588)
Q Consensus 479 -~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~ 557 (588)
.++. .+...+...|.++||.+++|..+. . .+ +||++++ .+.++++.
T Consensus 334 ~~~~~-----~~~~~~~~~l~~~gv~v~~g~~f~----------------~--------~~--~iRi~~~--~~~~~~~~ 380 (394)
T PRK06836 334 PKSPE-----EDDVAFCEKAKKHNLLLVPGSGFG----------------C--------PG--YFRLSYC--VDTETIER 380 (394)
T ss_pred EeCCC-----CCHHHHHHHHHhCCEEEECchhcC----------------C--------CC--eEEEEec--CCHHHHHH
Confidence 3332 245667778888999999874331 0 12 8999998 37899999
Q ss_pred HHHHHHHhhhh
Q 037063 558 LWAFVSRFLDA 568 (588)
Q Consensus 558 li~~l~~~l~~ 568 (588)
.++.|+++++.
T Consensus 381 ~i~~l~~~l~~ 391 (394)
T PRK06836 381 SLPAFEKLAKE 391 (394)
T ss_pred HHHHHHHHHHH
Confidence 99999988753
No 188
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.81 E-value=3.6e-17 Score=173.13 Aligned_cols=318 Identities=15% Similarity=0.100 Sum_probs=205.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
+..+++..+.+++++|+. .++.++|+|.|+.+++.++.+++||+|+ ..+.+++ . .......|++++++++
T Consensus 24 g~~~~~fE~~~a~~~g~~----~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~-~----~~ai~~~G~~pv~~Di 94 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVK----YAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPA-T----ASAILWAGAEPVFVDI 94 (363)
T ss_dssp SHHHHHHHHHHHHHHTSS----EEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-TH-H----HHHHHHTT-EEEEE-B
T ss_pred CHHHHHHHHHHHHHhCCC----eEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchH-H----HHHHHHhccEEEEEec
Confidence 467789999999999974 3999999999999999999999999965 5666664 2 2334567999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCC--CCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDM--DTLGLS 333 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~--~~l~l~ 333 (588)
+..++.+|+++++++|+ ++|+.|++.|. -|...++++| ++|+++|+.||.|++|+.+... ..+|
T Consensus 95 ~~~~~~id~~~~~~~i~--------~~t~ai~~~h~---~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G-- 161 (363)
T PF01041_consen 95 DPETLNIDPEALEKAIT--------PKTKAILVVHL---FGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVG-- 161 (363)
T ss_dssp ETTTSSB-HHHHHHHHH--------TTEEEEEEE-G---GGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETT--
T ss_pred cCCcCCcCHHHHHHHhc--------cCccEEEEecC---CCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEecc--
Confidence 98899999999999999 88999999987 8999999999 9999999999999999997211 1222
Q ss_pred CCCCcEEEeccC--ccCCCCCCceEEEEEeCcc-hhcccCCCCCCCceEeeecCCCcccccccccccccc-c--CC-CCC
Q 037063 334 LFKPDFLICSFY--KIFGENPSGFGCLFVKKSS-ASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS-K--FP-ESS 406 (588)
Q Consensus 334 ~~~~D~vv~S~~--K~~G~~P~G~G~L~v~~~~-~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~-e--~G-T~~ 406 (588)
.+ -|+.++||| |.+.. . ..|+++++++. .++++..... |.... .. .++. + .| ...
T Consensus 162 ~~-gd~~~fSf~~~K~i~~-g-eGG~v~~~~~~~~~~~~~~~~~--g~~~~-~~------------~~~~~~~~~g~n~r 223 (363)
T PF01041_consen 162 SF-GDIAIFSFHPTKIITT-G-EGGAVVTNDPELAERARALRNH--GRSRD-AF------------RRYRHELPPGYNFR 223 (363)
T ss_dssp SS-SSEEEEESSTTSSS-S-S-S-EEEEESTHHHHHHHHHHTBT--TEETS-EC------------STTEESSSS--B-B
T ss_pred CC-CCceEecCCCCCCCcC-C-CCeeEEecHHHHHHHhhhhhcc--CcCcc-cc------------ccccccccCCcccc
Confidence 11 399999997 77653 2 35888888754 3445433222 21100 00 0110 0 11 112
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc--EEEEEeecCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP--SLAFNVFDWN 484 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~--iv~f~~~~~~ 484 (588)
+..+ ....++..+++ ++.+.++.+++++++.+.|.++ +++..........+.. .+.+.+.+..
T Consensus 224 m~~~----~AAigl~QL~~--L~~~~~~R~~~a~~y~~~L~~~---------~~~~~~~~~~~~~~~~~~~f~i~~~~~~ 288 (363)
T PF01041_consen 224 MSEL----QAAIGLAQLKR--LDEIIARRRENAQRYREALAGI---------PGIKPPPIPDGAERSSYYRFPIRLPDEA 288 (363)
T ss_dssp -BHH----HHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHTTG---------TTEEEEGCGTTTEEBCESSEEEEETCCG
T ss_pred cHHH----HHHHHHHHHHH--hhhhHHHHHHHHHHHHHHHhcC---------CCcccccccccccccccccccccccccc
Confidence 2222 22345666666 4888888899999999999985 5665544322111122 3444444421
Q ss_pred CCCcCHHHHHHHHHhCCcEeccccc--cC--cccccch-----HHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHH
Q 037063 485 GTRIDPALVQKLADRHNISLSCGFL--QN--IFFSGEY-----EQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDT 555 (588)
Q Consensus 485 g~~i~~~~v~~~l~~~gI~v~~G~~--c~--~~~~~~~-----~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv 555 (588)
. .+.+.+.+.|.+.||.++.... .+ +.+.... .-..+..+.++ .+.+.++...+.+||
T Consensus 289 ~--~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r-----------~l~LP~~~~lt~edv 355 (363)
T PF01041_consen 289 L--ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQR-----------LLSLPIHPRLTEEDV 355 (363)
T ss_dssp C--STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHH-----------EEEEEHSTTSCHHHH
T ss_pred c--chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhC-----------eEECcCCCCCCHHHH
Confidence 1 3578899999999999887641 11 1111100 00122223332 899999999999999
Q ss_pred HHHHHHHH
Q 037063 556 YRLWAFVS 563 (588)
Q Consensus 556 ~~li~~l~ 563 (588)
+++++.|+
T Consensus 356 ~~I~~~ir 363 (363)
T PF01041_consen 356 DYIAEAIR 363 (363)
T ss_dssp HHHHHHHH
T ss_pred HHHhhccC
Confidence 99999875
No 189
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.81 E-value=1.2e-17 Score=174.58 Aligned_cols=304 Identities=16% Similarity=0.118 Sum_probs=213.0
Q ss_pred cccccCCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcC
Q 037063 169 SWLQYGSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRG 248 (588)
Q Consensus 169 s~~~~g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G 248 (588)
++...|. .++..++.+.+|+|+|.+ ..++|++|-...+.++ .++ .+++|-|+++...|++.+.+ ++..+
T Consensus 76 sR~i~G~--~~~h~~LE~~lA~f~g~e---~al~f~SGy~AN~~~i-~~l-~~~~dli~~D~lnHASiidG----~rls~ 144 (388)
T COG0156 76 SRLISGT--SDLHVELEEELADFLGAE---AALLFSSGFVANLGLL-SAL-LKKGDLIFSDELNHASIIDG----IRLSR 144 (388)
T ss_pred cCcccCC--cHHHHHHHHHHHHHhCCC---cEEEEcccchhHHHHH-HHh-cCCCcEEEEechhhhhHHHH----HHhCC
Confidence 3444454 578889999999999995 3599999988765544 566 67788888887777655444 45568
Q ss_pred CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC--
Q 037063 249 ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK-- 325 (588)
Q Consensus 249 ~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~-- 325 (588)
++++.... .|+++|+++|.+.+ .... +.++|++..+.++.|.+.|+.+| ++++++|++++||.++++|+
T Consensus 145 a~~~~f~H------nD~~~Le~~l~~~~-~~~~-~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G 216 (388)
T COG0156 145 AEVRRFKH------NDLDHLEALLEEAR-ENGA-RRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLG 216 (388)
T ss_pred CcEEEecC------CCHHHHHHHHHhhh-ccCC-CceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccC
Confidence 88887765 37899999997310 1112 58999999999999999999999 99999999999999998862
Q ss_pred -----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccc
Q 037063 326 -----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS 400 (588)
Q Consensus 326 -----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~ 400 (588)
-++.+++....+|+++.++.|.|| -.| |++.....+++.|.....+ . .|
T Consensus 217 ~~GrG~~e~~g~~~~~vdi~~gTlsKAlG--s~G-g~v~g~~~~~d~L~~~ar~---~-------------------if- 270 (388)
T COG0156 217 PNGRGLAEHFGLEPEEVDIIVGTLGKALG--SSG-GYIAGSAALIDYLRNRARP---F-------------------IF- 270 (388)
T ss_pred CCCccHHHHhCCCCccceEEEEEchhhhc--ccC-ceeeCcHHHHHHHHHhCCc---e-------------------ec-
Confidence 123455555557999999999999 333 7777777777655433211 0 22
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEe
Q 037063 401 KFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNV 480 (588)
Q Consensus 401 e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~ 480 (588)
..+-|+.. .++...+|+.+.+. ....++++.+..+++..++.+ ++.+ .+ ...+|+.+.+
T Consensus 271 StalpP~~----aaa~~~al~~l~~~--~~~r~~L~~~~~~~~~~~~~~----------~~~~-~~----s~s~I~pv~~ 329 (388)
T COG0156 271 STALPPAV----AAAALAALRILEEG--PERRERLQELAAFFRSLLKAL----------GLVL-LP----SESPIIPVIL 329 (388)
T ss_pred cCCCCHHH----HHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHhc----------CCcc-CC----CCCCeeeeEe
Confidence 11112222 24666888888764 677888889999988666553 1211 22 3468988888
Q ss_pred ecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 481 FDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 481 ~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
.+.. ....+...+.+.||.+..... |- . ..|...+|+++...+|.+||+++++
T Consensus 330 gd~~----~a~~~s~~l~~~Gi~v~~i~~--PT-------------V--------p~gtarlRi~lta~ht~~~I~~l~~ 382 (388)
T COG0156 330 GDEE----RALEASRALLEEGIYVSAIRP--PT-------------V--------PKGTARLRITLTAAHTEEDIDRLAE 382 (388)
T ss_pred CCHH----HHHHHHHHHHHCCeeEeeecC--CC-------------C--------CCCcceEEEEecCCCCHHHHHHHHH
Confidence 7632 133444445555999875422 10 0 1344589999999999999999999
Q ss_pred HHHHh
Q 037063 561 FVSRF 565 (588)
Q Consensus 561 ~l~~~ 565 (588)
++.+.
T Consensus 383 ~l~~~ 387 (388)
T COG0156 383 ALSEV 387 (388)
T ss_pred HHHhh
Confidence 98764
No 190
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=2.6e-18 Score=183.27 Aligned_cols=168 Identities=11% Similarity=0.027 Sum_probs=131.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
...++++++++++++|++ .+++++|+|+|+.+++.++ +++||+|++ ...|.. ....+...++..|+++++++.
T Consensus 64 ~pt~~~Le~~lA~l~g~~----~~l~~~sgt~Ai~~~l~al-~~~GD~Vl~~~~~y~~-~~~~~~~~~~~~Gi~v~~vd~ 137 (394)
T PRK07050 64 TPTSLALAQRLAEIEGGR----HALLQPSGLAAISLVYFGL-VKAGDDVLIPDNAYGP-NRDHGEWLARDFGITVRFYDP 137 (394)
T ss_pred CHHHHHHHHHHHHHhCCC----eEEEeccHHHHHHHHHHHH-hCCCCEEEEecCCccc-HHHHHHHHHHhcCeEEEEECC
Confidence 445679999999999973 3999999999999999999 899999765 445544 333334566788999998864
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
. +.++++++|+ ++|++|++.+++|++|...++++| ++|+++|++|++|+++..|....++.+
T Consensus 138 ~------~~~~l~~~i~--------~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~~--- 200 (394)
T PRK07050 138 L------IGAGIADLIQ--------PNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAFKPFEH--- 200 (394)
T ss_pred C------CHHHHHHhcC--------CCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccccCHHHc---
Confidence 3 3467888887 789999999999999999999999 999999999999999888743444432
Q ss_pred CCcEEEeccCccCCCCCCc--eEEEEEeC-cchhccc
Q 037063 336 KPDFLICSFYKIFGENPSG--FGCLFVKK-SSASVLS 369 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~G~L~v~~-~~~~~l~ 369 (588)
++|+++.|++|+++. ..+ .|++++++ +++++++
T Consensus 201 GaDi~v~S~tK~~~g-~~~~~gG~v~~~~~~~~~~~~ 236 (394)
T PRK07050 201 GVDISVQALTKYQSG-GSDVLMGATITADAELHAKLK 236 (394)
T ss_pred CCeEEEEECCceecC-CCCeeEEEEEECCHHHHHHHH
Confidence 389999999997762 223 56666654 4545443
No 191
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.81 E-value=2.1e-17 Score=179.01 Aligned_cols=294 Identities=15% Similarity=0.049 Sum_probs=192.9
Q ss_pred HHHHHHHHHHhCC--CCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCC
Q 037063 182 SKIRKRIMDFMNI--SEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWP 259 (588)
Q Consensus 182 ~~~r~~ia~~lga--~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~ 259 (588)
.++|+.++++++. .++ .+|++|+|+++|+.+++.++ .++||.|++....+.. ....++..|++++.++++ +
T Consensus 124 ~~lr~~ia~~~~~~~~~~-~~Iiit~G~~~al~~~~~~l-~~pgd~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~~-~ 196 (431)
T PRK15481 124 PELHAWAARWLRDDCPVA-FEIDLTSGAIDAIERLLCAH-LLPGDSVAVEDPCFLS----SINMLRYAGFSASPVSVD-A 196 (431)
T ss_pred HHHHHHHHHHHhhccCCc-CeEEEecCcHHHHHHHHHHh-CCCCCEEEEeCCCcHH----HHHHHHHcCCeEEeeccC-C
Confidence 3688888888763 322 35999999999999999999 8999998776655432 245667789999999996 4
Q ss_pred CCccCHHHHHHHHhhhccccCCCcceEEEEe-CCCCCCCccCCHH---HH-HHHHHc-CcEEEEeCCCc--CCCC-CCCC
Q 037063 260 NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFP-LQSKVTGARYSYM---WM-SVAAEK-GWHVLLDATAL--GSKD-MDTL 330 (588)
Q Consensus 260 ~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~-~~sn~tG~~~pl~---~I-~~a~~~-g~~vvvDaa~~--~~~d-~~~l 330 (588)
++ ++.++|+++++ ++++++++. .++||||..++.+ +| ++|+++ +++||+|.+.. .... ...+
T Consensus 197 ~g-~~~~~l~~~~~--------~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~ 267 (431)
T PRK15481 197 EG-MQPEKLERALA--------QGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVI 267 (431)
T ss_pred CC-CCHHHHHHHHh--------cCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCC
Confidence 44 89999999987 567777765 9999999999997 56 889999 99999999732 1100 1112
Q ss_pred CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 331 GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 331 ~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
.. ..+--+++.||+|.|| +..++|+++.++++++.+....... ..+++.+.+
T Consensus 268 ~~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~~-------------------------~~~~s~~~q- 319 (431)
T PRK15481 268 PQ-TTQRWALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNSG-------------------------TQWVSHLLQ- 319 (431)
T ss_pred cC-CCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhcc-------------------------ccCCCHHHH-
Confidence 11 1223588899999999 4678999999888776664221100 000111111
Q ss_pred hhHHHHHHHHHH--HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCc
Q 037063 411 SSKLVECKGLDH--ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 411 ~~~~al~~aL~~--l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i 488 (588)
.++..+|+. +.+. +++..+..+...+++.+.|.++ ++++..| ..|..+-+.+.+
T Consensus 320 ---~a~~~~l~~~~~~~~-l~~~~~~~~~~r~~~~~~L~~~----------~~~~~~p----~gg~f~~~~l~~------ 375 (431)
T PRK15481 320 ---DLVYACLTDPEYQAR-LAQARLFYAQRRQKLARALQQY----------GIAIPSP----GDGLNLWLPLDT------ 375 (431)
T ss_pred ---HHHHHHHhCccHHHH-HHHHHHHHHHHHHHHHHHHHHc----------CCccccC----CCeEEEEEECCC------
Confidence 222333321 0110 3455666667777777877763 2232222 123333334432
Q ss_pred CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 489 DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 489 ~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
+...+.+.|.++||.+..|..+... .+..++|+|++.. +.++++++++.|++.++
T Consensus 376 ~~~~~~~~l~~~gV~v~pg~~f~~~-----------------------~~~~~iRis~~~~-~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 376 DSQATALTLAKSGWLVREGEAFGVS-----------------------APSHGLRITLSTL-NDAEINRLAADLHQALN 430 (431)
T ss_pred CHHHHHHHHHHCCcEEecCCccccC-----------------------CCCCeEEEEcCCC-ChHHHHHHHHHHHHHhc
Confidence 2455666677899999988543100 1112899999875 47999999999988764
No 192
>PRK07777 aminotransferase; Validated
Probab=99.81 E-value=2e-17 Score=176.70 Aligned_cols=305 Identities=12% Similarity=0.037 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHHHhCCCCCC-ceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDD-YTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e-~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
++.+.+.+.+.+.+|.+.+. ..|++|+|+++|+.+++.++ .++||+|++....+... ...++..|++++.++.+
T Consensus 65 ~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~-~~~gd~vli~~p~y~~~----~~~~~~~g~~~~~~~~~ 139 (387)
T PRK07777 65 ELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGL-VEPGDEVLLIEPYYDSY----AAVIAMAGAHRVPVPLV 139 (387)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCchhh----HHHHHHCCCEEEEeecC
Confidence 34444444444456765322 24999999999999999998 78999976544433212 34456679999999886
Q ss_pred CC--CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCCCcC----CCCC
Q 037063 258 WP--NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDATALG----SKDM 327 (588)
Q Consensus 258 ~~--~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa~~~----~~d~ 327 (588)
.. ++.+|+++|++++. +++++|++++++|+||..++.+ +| ++|+++|+++|+|.+... +...
T Consensus 140 ~~~~~~~~d~~~l~~~~~--------~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~ 211 (387)
T PRK07777 140 PDGRGFALDLDALRAAVT--------PRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARH 211 (387)
T ss_pred CccCCCcCCHHHHHHhcC--------cccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCc
Confidence 32 34589999999887 6789999999999999999844 46 889999999999998432 1000
Q ss_pred CCCC-CC-CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 328 DTLG-LS-LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 328 ~~l~-l~-~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
.++. +. ....++++.|++|.||.+..++|++++++++++.+....... . + ...
T Consensus 212 ~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~~~~~-~---------------------~---~~~ 266 (387)
T PRK07777 212 LPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQYL-T---------------------Y---VGG 266 (387)
T ss_pred ccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhc-c---------------------c---CCC
Confidence 1111 11 123578999999999853445899999888776554322100 0 0 001
Q ss_pred CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEE-EeecCC
Q 037063 406 SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAF-NVFDWN 484 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f-~~~~~~ 484 (588)
...+ .++..+++..++. ++.+.+++++.++++.+.|.++ +++++.| .++.+.+ .+...
T Consensus 267 ~~~q----~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~----------~~~~~~~-----~g~~~~~~~~~~~- 325 (387)
T PRK07777 267 APFQ----PAVAHALDHEDAW-VAALRDSLQAKRDRLAAGLAEA----------GFEVHDS-----AGTYFLCADPRPL- 325 (387)
T ss_pred CHHH----HHHHHHHhCCcHH-HHHHHHHHHHHHHHHHHHHHhC----------CCCccCC-----CcceEEEeccccc-
Confidence 1111 1222333321121 4556677777888888888774 2444433 2443333 43321
Q ss_pred CCCcCHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 485 GTRIDPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 485 g~~i~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
+. .+...+.+.| +++||.|.+|...... . ..+...||+|++. ..++++..++.|+
T Consensus 326 ~~-~~~~~~~~~l~~~~gv~v~pg~~f~~~--------------~-------~~~~~~~Ri~~~~--~~~~l~~~l~~l~ 381 (387)
T PRK07777 326 GY-DDGTEFCRALPERVGVAAIPMSVFYDP--------------A-------DAWNHLVRFAFCK--RDDTLDEAIRRLR 381 (387)
T ss_pred CC-CCHHHHHHHHHHhCCEEEeCchHhCCC--------------C-------cCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 11 2345555544 6789999988432100 0 0122389999974 6899999999888
Q ss_pred Hhh
Q 037063 564 RFL 566 (588)
Q Consensus 564 ~~l 566 (588)
++.
T Consensus 382 ~~~ 384 (387)
T PRK07777 382 ALR 384 (387)
T ss_pred HHh
Confidence 764
No 193
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=1.5e-17 Score=176.88 Aligned_cols=289 Identities=15% Similarity=0.149 Sum_probs=188.0
Q ss_pred HHHHHHHHHHhC--------CCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEEEcCCCchhHHHHHHHHHHhcCCEEE
Q 037063 182 SKIRKRIMDFMN--------ISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLLTVYDHENEAAALMIESSKKRGARVS 252 (588)
Q Consensus 182 ~~~r~~ia~~lg--------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll~~~e~~s~~~~~~~~~a~~~G~~v~ 252 (588)
.++|+.|+++++ +++++ |++|+|+++++.+++.++ ..+|+ +|++....+. .....++..|++++
T Consensus 69 ~~Lr~aia~~~~~~~~~~~~v~~~~--I~it~Ga~~al~~~~~~~-~~~g~~~Vlv~~P~y~----~~~~~~~~~g~~~~ 141 (374)
T PRK02610 69 EALKQAIAEYVNESAAGSSQITPAN--ISVGNGSDELIRSLLIAT-CLGGEGSILVAEPTFS----MYGILAQTLGIPVV 141 (374)
T ss_pred HHHHHHHHHHhCccccccCCCCHHH--EEEcCChHHHHHHHHHHH-cCCCCCeEEEcCCChH----HHHHHHHHcCCEEE
Confidence 478899999987 66554 999999999999877776 55675 6776555433 22456678899999
Q ss_pred EEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHH-HcCcEEEEeCCCc--CCCC-C
Q 037063 253 SAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAA-EKGWHVLLDATAL--GSKD-M 327 (588)
Q Consensus 253 ~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~-~~g~~vvvDaa~~--~~~d-~ 327 (588)
.++.+..+..+++++|++++.+ ...+++++|+++.++||||..++.+++ ++++ .+++++|+|.+-. .... +
T Consensus 142 ~~~~~~~~~~~d~~~l~~~~~~----~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~ 217 (374)
T PRK02610 142 RVGRDPETFEIDLAAAQSAIEQ----TQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLV 217 (374)
T ss_pred EecCCcccCCCCHHHHHHHHHh----hcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchH
Confidence 9998633567999999998861 111478999999999999999999998 4432 2489999999832 1100 1
Q ss_pred CCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCc
Q 037063 328 DTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSI 407 (588)
Q Consensus 328 ~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~ 407 (588)
.. +...+--+++.||.|.||.+..++|+++.++++++.+......+ + ++.+
T Consensus 218 ~~--~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~~~~-~--------------------------~~~~ 268 (374)
T PRK02610 218 GE--LAQHPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVRLPY-N--------------------------LPSF 268 (374)
T ss_pred HH--HhcCCCEEEEEecchhccCcccceeeeecCHHHHHHHHHhcCCC-C--------------------------CCHH
Confidence 11 11111236788999999865677999999888877664332110 0 0111
Q ss_pred cchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCC
Q 037063 408 SGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTR 487 (588)
Q Consensus 408 ~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~ 487 (588)
.+ .+...+++..+.. ++.+.+.. +.++.+.+.|+++ +++.++ | ..+..+-+.+.+ +
T Consensus 269 ~q----~a~~~~l~~~~~~-~~~~~~~~-~~r~~l~~~L~~~---------~~~~~~-p----~~g~f~~~~l~~--~-- 324 (374)
T PRK02610 269 SQ----LAAQLALEHRQEL-LAAIPEIL-QERDRLYQALQEL---------PQLRVW-P----SAANFLYLRLSQ--D-- 324 (374)
T ss_pred HH----HHHHHHhcCHHHH-HHHHHHHH-HHHHHHHHHHHhC---------CCcEeC-C----CcceEEEEeCCC--C--
Confidence 11 2223444432221 22233222 2355666777653 345543 3 234444444432 1
Q ss_pred cCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 488 IDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 488 i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
++...+.+.|.++||.++.+ .+ .||+|++ +.++++++++.|+++++
T Consensus 325 ~~~~~~~~~l~~~gi~v~~~-----------------------------~~--~lRls~~---~~~~~~~~l~~l~~~l~ 370 (374)
T PRK02610 325 AALAALHQALKAQGTLVRHT-----------------------------GG--GLRITIG---TPEENQRTLERLQAALT 370 (374)
T ss_pred CCHHHHHHHHHHCCEEEEeC-----------------------------CC--eEEEeCC---CHHHHHHHHHHHHHHHh
Confidence 45677777788899998642 12 8999987 46889999999998875
Q ss_pred h
Q 037063 568 A 568 (588)
Q Consensus 568 ~ 568 (588)
+
T Consensus 371 ~ 371 (374)
T PRK02610 371 Q 371 (374)
T ss_pred h
Confidence 4
No 194
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.81 E-value=6.2e-19 Score=181.20 Aligned_cols=224 Identities=12% Similarity=-0.002 Sum_probs=164.8
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcC-CCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVY-DHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~-e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
...++++++.+|+++|++ +.+++|+|+|+|+..++.++ +++||+|++.. .|.+ .+.. +...|+++++++.
T Consensus 58 ~g~i~~~~~~~A~~~ga~---~~~~~~~Gst~a~~~~l~al-~~~gd~Vlv~~~~h~s-~~~~----~~~~g~~~~~v~~ 128 (294)
T cd00615 58 TGPIKEAQELAARAFGAK---HTFFLVNGTSSSNKAVILAV-CGPGDKILIDRNCHKS-VING----LVLSGAVPVYLKP 128 (294)
T ss_pred ChHHHHHHHHHHHHhCCC---CEEEEcCcHHHHHHHHHHHc-CCCCCEEEEeCCchHH-HHHH----HHHCCCEEEEecC
Confidence 456889999999999985 34666999999999999999 89999977654 4544 3322 3457999999987
Q ss_pred cCCC-----CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC---CC
Q 037063 257 AWPN-----LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK---DM 327 (588)
Q Consensus 257 ~~~~-----~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~---d~ 327 (588)
++.. +.++++++++++++ .+++++|+++++ |++|..+|+++| ++|+++|++++||+++.... ..
T Consensus 129 ~~~~~~~~~~~i~~~~l~~~l~~------~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~ 201 (294)
T cd00615 129 ERNPYYGIAGGIPPETFKKALIE------HPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPI 201 (294)
T ss_pred ccCcccCcCCCCCHHHHHHHHHh------CCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcc
Confidence 5332 36899999999972 146899999986 789999999999 99999999999999976421 01
Q ss_pred CCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchh--cccCCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 328 DTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSAS--VLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 328 ~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~--~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
.+......++|+++.|+||+++. +++.|+++++++... ++.... ..| +.+++
T Consensus 202 ~~~~~~~~~~div~~S~hK~l~g-~~~~~~l~~~~~~~~~~~~~~~~------------------------~~~-~ttsp 255 (294)
T cd00615 202 LPSSAAMAGADIVVQSTHKTLPA-LTQGSMIHVKGDLVNPDRVNEAL------------------------NLH-QSTSP 255 (294)
T ss_pred cCcchhhcCCcEEEEchhcccch-HhHHHHHHhCCCcCCHHHHHHHH------------------------HHH-CCCCc
Confidence 12222234599999999998763 777888888775321 111000 033 56677
Q ss_pred CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Q 037063 406 SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALM 447 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~ 447 (588)
++..+ +++..+++++...|.+ ..++..+++++++++|.
T Consensus 256 s~~~~---asl~~a~~~~~~~g~~-~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 256 SYLIL---ASLDVARAMMALEGKE-LVEELIELALYARQEIN 293 (294)
T ss_pred HHHHH---HHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHh
Confidence 77765 7888999988777744 56777888888888765
No 195
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.81 E-value=1.3e-17 Score=179.13 Aligned_cols=306 Identities=13% Similarity=0.063 Sum_probs=192.8
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
.++.+.+.+.+.+.+|.+-+..+|++|+|+++|+.+++.++ +++||.|+++...+..+.. .....|++++.++.+
T Consensus 73 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~-~~~gd~vl~~~p~y~~y~~----~~~~~~~~~~~v~~~ 147 (402)
T PRK06107 73 PALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMAT-LEAGDEVIIPAPYWVSYPD----MVLANDGTPVIVACP 147 (402)
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHh-cCCCCEEEEecCCCcCHHH----HHHHcCCEEEEecCC
Confidence 35666777777777777433345999999999999999988 8999997765443322222 224457788888875
Q ss_pred C-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHc-CcEEEEeCCCcC----C---
Q 037063 258 W-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEK-GWHVLLDATALG----S--- 324 (588)
Q Consensus 258 ~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~-g~~vvvDaa~~~----~--- 324 (588)
. .++.++.+++++++. ++++++++++++|+||..+|.+++ ++|+++ |+++|+|.+-.- +
T Consensus 148 ~~~~~~~~~~~l~~~~~--------~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~ 219 (402)
T PRK06107 148 EEQGFKLTPEALEAAIT--------PRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPT 219 (402)
T ss_pred cccCCCCCHHHHHhhcC--------cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCC
Confidence 2 234688899998887 678999999999999999998664 668887 999999987321 1
Q ss_pred CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 325 KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 325 ~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
..+..++-.....-+++.|++|.||.+..++|+++.++++++.+....... ..+.
T Consensus 220 ~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~-------------------------~~~~ 274 (402)
T PRK06107 220 PHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKLQSQS-------------------------SSCP 274 (402)
T ss_pred CCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHHHHHHHHHhc-------------------------ccCC
Confidence 011111101111357788999998843455799999888877665432110 0011
Q ss_pred CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEE-Eeec-
Q 037063 405 SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAF-NVFD- 482 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f-~~~~- 482 (588)
..+.+ +++..+|+.-... ++...++.++.++.+++.|.++ +++.+..| .++...+ .+..
T Consensus 275 s~~~q----~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~L~~~---------~g~~~~~p-----~gg~~~~~~~~~~ 335 (402)
T PRK06107 275 SSISQ----AAAAAALNGDQSF-VTESVAVYKQRRDYALALLNAI---------PGLSCLVP-----DGAFYLYVNCAGL 335 (402)
T ss_pred ChHHH----HHHHHHhcCChHH-HHHHHHHHHHHHHHHHHHHhcC---------CCCcccCC-----CcceEEeeecccc
Confidence 11111 2223333210111 3455556666677777877663 34554433 2444333 2311
Q ss_pred -----CCCCC-cCH-HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHH
Q 037063 483 -----WNGTR-IDP-ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDT 555 (588)
Q Consensus 483 -----~~g~~-i~~-~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv 555 (588)
..+.. .+. +.+.++++++||.+.+|.... .. ++||+|++. +.|++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg------------------------~~--~~iRis~~~--~~e~l 387 (402)
T PRK06107 336 IGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYG------------------------LS--PYFRLSIAT--SLETL 387 (402)
T ss_pred cccccccccCCCCHHHHHHHHHHhCCEEEeCccccC------------------------CC--CeEEEEeCC--CHHHH
Confidence 11111 133 345678889999999884321 01 289999984 79999
Q ss_pred HHHHHHHHHhhhh
Q 037063 556 YRLWAFVSRFLDA 568 (588)
Q Consensus 556 ~~li~~l~~~l~~ 568 (588)
++.++.|.+++++
T Consensus 388 ~~~l~~l~~~l~~ 400 (402)
T PRK06107 388 EEACARIERAVAA 400 (402)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988754
No 196
>PRK09082 methionine aminotransferase; Validated
Probab=99.80 E-value=9.7e-18 Score=179.07 Aligned_cols=303 Identities=12% Similarity=0.077 Sum_probs=195.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCC-ceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDD-YTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e-~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++.+.+.+.+.++++.+.+. .+|++|+|+++|+.+++.++ +.+||+|+.....+... ...++..|++++.++.
T Consensus 70 ~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~-~~~gd~Vli~~p~y~~~----~~~~~~~g~~~~~~~~ 144 (386)
T PRK09082 70 AALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILAL-VRPGDEVIVFDPSYDSY----APAIELAGGRAVRVAL 144 (386)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHH-cCCCCEEEEeCCCchhh----HHHHHHcCCEEEEEec
Confidence 456677777887888876433 25999999999999999998 89999977655444323 3344567999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC----CC-CC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG----SK-DM 327 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~----~~-d~ 327 (588)
+..++.+|++++++++. +++++|++++++|+||..++.++ | ++|+++|+++|+|.+..- +. ..
T Consensus 145 ~~~~~~~d~~~l~~~~~--------~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~ 216 (386)
T PRK09082 145 QPPDFRVDWQRFAAAIS--------PRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHA 216 (386)
T ss_pred CcccccCCHHHHHHhcC--------ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCC
Confidence 74567899999999987 67899999999999999987554 5 889999999999998421 10 01
Q ss_pred CCCCCC-CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 328 DTLGLS-LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 328 ~~l~l~-~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
.-..+. .....+++.|++|.+|.+..++|+++.++++++.+....... ..+.+.
T Consensus 217 s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~~-------------------------~~~~~~ 271 (386)
T PRK09082 217 SVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVHQYN-------------------------TFTVNT 271 (386)
T ss_pred ChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHHHHhhh-------------------------cCCCCh
Confidence 111111 123568889999999853445899999888776654432100 001111
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE-EEEEeecCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS-LAFNVFDWNG 485 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i-v~f~~~~~~g 485 (588)
+.+ .++...++...+. ++++.+..++.++++.+.|.++ +++++.+ .|+. +-+.+++..+
T Consensus 272 ~~q----~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~L~~~----------~~~~~~~-----~g~~~~~~~~~~~~~ 331 (386)
T PRK09082 272 PAQ----LALADYLRAEPEH-YLELPAFYQAKRDRFRAALANS----------RFKLLPC-----EGTYFQLVDYSAISD 331 (386)
T ss_pred HHH----HHHHHHHhCChHH-HHHHHHHHHHHHHHHHHHHHhC----------CCcccCC-----CeeEEEEEeccccCC
Confidence 111 1222333211111 3445566667777788888763 2444322 3443 3345543111
Q ss_pred CCcCHHHHHH-HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 486 TRIDPALVQK-LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 486 ~~i~~~~v~~-~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
++..++.+ +++++||.+.+|.... .. ..+.+++|+|++. +.++++..++.|++
T Consensus 332 --~~~~~~~~~l~~~~~v~v~pg~~f~----------------~~------~~~~~~~Ri~~~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 332 --LDDVEFCQWLTREHGVAAIPLSVFY----------------AD------PFPHRLVRLCFAK--QEETLDAAAERLCQ 385 (386)
T ss_pred --CCHHHHHHHHHHhCCEEEeCcHHhC----------------CC------CCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 34555544 5688999998874210 00 0222389999985 67888888887764
No 197
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.80 E-value=1e-17 Score=177.31 Aligned_cols=299 Identities=17% Similarity=0.142 Sum_probs=187.8
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....++++++++++.|++. .++++|+++|+.++. ++ +++||+|++ ...|++ ....+...++..|++++.++.
T Consensus 51 ~pt~~~le~~la~l~g~~~----~~~~~sG~~ai~~~~-~l-l~~Gd~Vl~~~~~y~~-t~~~~~~~~~~~G~~v~~vd~ 123 (366)
T PRK08247 51 NPTRGVLEQAIADLEGGDQ----GFACSSGMAAIQLVM-SL-FRSGDELIVSSDLYGG-TYRLFEEHWKKWNVRFVYVNT 123 (366)
T ss_pred CchHHHHHHHHHHHhCCCc----EEEEcCHHHHHHHHH-HH-hCCCCEEEEecCCcCc-HHHHHHHHhhccCceEEEECC
Confidence 3456799999999999952 466777889999876 45 789999664 445554 333335566778999998875
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
. |+++++++++ ++|++|.+..++||+|...++++| ++|+++|+++|+|.+...+....++. .
T Consensus 124 ~------d~~~l~~~i~--------~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~~---~ 186 (366)
T PRK08247 124 A------SLKAIEQAIT--------PNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPLE---E 186 (366)
T ss_pred C------CHHHHHHhcc--------cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCchh---c
Confidence 2 7889999887 689999999999999999999999 99999999999999976663223332 3
Q ss_pred CCcEEEeccCccCCCCCCc--eEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 336 KPDFLICSFYKIFGENPSG--FGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
++|+++.|++|+++. +.+ .|+++.+ +++.+.+....... +. ...++.+
T Consensus 187 g~di~i~S~sK~~~g-~~d~~~G~iv~~~~~l~~~~~~~~~~~-g~------------------------~~s~~~a--- 237 (366)
T PRK08247 187 GADIVIHSATKYLGG-HNDVLAGLVVAKGQELCERLAYYQNAA-GA------------------------VLSPFDS--- 237 (366)
T ss_pred CCcEEEeecceeccC-CCceeeeEEecChHHHHHHHHHHHHhc-CC------------------------CCChHHH---
Confidence 489999999998872 333 5666665 34444443221110 00 0001111
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEE-EeCCCCCCCcccEEEEEeecCCCCCcCHH
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVR-IYGPKVMFDRGPSLAFNVFDWNGTRIDPA 491 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~-i~~p~~~~~rg~iv~f~~~~~~g~~i~~~ 491 (588)
..+..+++. +....++.++.++.+.+.|++. |.+. ++.| ..|++++|.+.+ .+
T Consensus 238 -~l~~~~l~t-----l~~r~~~~~~~a~~l~~~L~~~---------p~v~~v~~P----~~gg~~sf~~~~-------~~ 291 (366)
T PRK08247 238 -WLLIRGMKT-----LALRMRQHEENAKAIAAFLNEQ---------PGVTDVLYP----GRGGMLSFRLQD-------EE 291 (366)
T ss_pred -HHHHhccCc-----HHHHHHHHHHHHHHHHHHHHhC---------CCeeEEecC----CcCcEEEEEECC-------HH
Confidence 112234432 2334445567777777778763 5554 4444 258899997643 33
Q ss_pred HHHHHHHhCCc---Eecccc----ccCcccccchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCCCCCHHHHHHHHHHH
Q 037063 492 LVQKLADRHNI---SLSCGF----LQNIFFSGEYEQERVRVLETRSGTNETRSGV--SVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 492 ~v~~~l~~~gI---~v~~G~----~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~~t~eDv~~li~~l 562 (588)
...++++...+ ..+-|. .+.|+....+. ........ .|+ +.||+|.|. ||++.+++-|
T Consensus 292 ~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~--~~~~~r~~-------~gi~~~~~R~svGl----E~~~dl~~dl 358 (366)
T PRK08247 292 WVNPFLKSLKLITFAESLGGVESFITYPATQTHAD--IPEEIRIA-------NGVCNRLLRFSVGI----ENVEDLIADL 358 (366)
T ss_pred HHHHHHHcCCcceEccCCCCCceEEECCccccccc--CCHHHHHh-------cCCCCCeEEEEecc----CCHHHHHHHH
Confidence 34455553322 222221 22222111110 00111111 333 389999997 8888888888
Q ss_pred HHhhhh
Q 037063 563 SRFLDA 568 (588)
Q Consensus 563 ~~~l~~ 568 (588)
.+.|++
T Consensus 359 ~~al~~ 364 (366)
T PRK08247 359 KQAFKQ 364 (366)
T ss_pred HHHHhh
Confidence 887764
No 198
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.80 E-value=1.8e-17 Score=178.11 Aligned_cols=297 Identities=13% Similarity=0.078 Sum_probs=192.3
Q ss_pred HHHHHHHHHh----C---CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 183 KIRKRIMDFM----N---ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 183 ~~r~~ia~~l----g---a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
++|+.|++++ | ++++ .+|++|+|+++++.+++..+ +++||+|++....+... ...++..|++++.++
T Consensus 85 ~lr~aia~~~~~~~g~~~~~~~-~~I~it~Gs~~al~~~~~~~-~~~gd~Vlv~~P~y~~~----~~~~~~~g~~v~~v~ 158 (410)
T PRK06290 85 EFKEAAARYMEKVFGVKDIDPV-TEVIHSIGSKPALAMLPSCF-INPGDVTLMTVPGYPVT----GTHTKYYGGEVYNLP 158 (410)
T ss_pred HHHHHHHHHHHHHcCCCcCCCc-ceEEEccCHHHHHHHHHHHh-CCCCCEEEEeCCCCccH----HHHHHHcCCEEEEEe
Confidence 5666666664 5 4443 24999999999999999999 89999977654443312 345677899999999
Q ss_pred ccCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC----C--
Q 037063 256 FAWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG----S-- 324 (588)
Q Consensus 256 ~~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~----~-- 324 (588)
++.+ +..++.+++++.+. +++++|+++.++||||..+|.++ | ++|+++|++||+|.+..- +
T Consensus 159 ~~~~~~~~~d~~~l~~~~~--------~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~ 230 (410)
T PRK06290 159 LLEENNFLPDLDSIPKDIK--------EKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKP 230 (410)
T ss_pred cCCCcCCcCCHHHHHHhhc--------ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCC
Confidence 9732 35578999988887 67899999999999999999765 4 678999999999998322 1
Q ss_pred CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 325 KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 325 ~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
..+..+. .....++++.|+.|.+|.+..++|+++..+++++.+....... ..++
T Consensus 231 ~s~~~~~-~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~~~~~-------------------------~~~~ 284 (410)
T PRK06290 231 LSFLSVP-GAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFATVKDNN-------------------------DSGQ 284 (410)
T ss_pred cChhcCC-CccccEEEEeechhhcCCchhheEeEEeCHHHHHHHHHHHhcc-------------------------ccCC
Confidence 1111111 1123578999999998854456999999888776554322110 0111
Q ss_pred CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEE-EeecC
Q 037063 405 SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAF-NVFDW 483 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f-~~~~~ 483 (588)
..+.+ .++..+|+.- +. ++++.++.+..++++.+.|.++ ++.++.| .|+++.+ .+++.
T Consensus 285 ~~~~q----~aa~~~l~~~-~~-~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~p-----~g~f~l~v~lp~~ 343 (410)
T PRK06290 285 FIAIQ----KAGIYALDHP-EI-TEKIREKYSRRLDKLVKILNEV----------GFKAEMP-----GGTFYLYVKAPKG 343 (410)
T ss_pred cHHHH----HHHHHHhhCc-HH-HHHHHHHHHHHHHHHHHHHHhC----------CCeecCC-----CeeeEEEEECCCc
Confidence 11111 2223344321 11 4566777777788888888874 2444432 3455544 44321
Q ss_pred C--CC-CcCHHHHHH-HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecC-CCCCHHHHHHH
Q 037063 484 N--GT-RIDPALVQK-LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALG-CLTNFEDTYRL 558 (588)
Q Consensus 484 ~--g~-~i~~~~v~~-~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg-~~~t~eDv~~l 558 (588)
. +. ..+...+.. ++++.+|.+.+|..+ . +++||+++ .-.+.|+.+++
T Consensus 344 ~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~--------------------------~--~~lRi~~~~~~~~~~~~~~~ 395 (410)
T PRK06290 344 TKSGIKFENAEEFSQYLIKEKLISTVPWDDA--------------------------G--HFLRFSVTFEAKDEEEEDRI 395 (410)
T ss_pred cccCCCCCCHHHHHHHHHHhCCEEEECCccc--------------------------c--CeEEEEEEcccccccchhHH
Confidence 0 00 023555555 445555555444211 1 28999996 45588999999
Q ss_pred HHHHHHhhhh
Q 037063 559 WAFVSRFLDA 568 (588)
Q Consensus 559 i~~l~~~l~~ 568 (588)
+++|++.|..
T Consensus 396 ~~~l~~~~~~ 405 (410)
T PRK06290 396 LEEIKRRLSD 405 (410)
T ss_pred HHHHHHHHhh
Confidence 9999988765
No 199
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.80 E-value=7.2e-17 Score=173.73 Aligned_cols=163 Identities=13% Similarity=0.101 Sum_probs=130.1
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....++++++|++++|.+ + .++++++++|+..++.++ +++||+|+ ....|+. ....+...++..|++++.++.
T Consensus 56 ~p~~~~le~~lA~l~g~~--~--~v~~~sG~~Ai~~al~~l-~~~Gd~Vl~~~~~y~~-t~~~~~~~~~~~G~~v~~v~~ 129 (418)
T TIGR01326 56 NPTTDVLEQRIAALEGGV--A--ALAVASGQAAITYAILNL-AQAGDNIVSSSYLYGG-TYNLFKHTLKRLGIEVRFVDP 129 (418)
T ss_pred ChhHHHHHHHHHHHhCCC--e--EEEEccHHHHHHHHHHHH-hCCCCEEEEECCCcHH-HHHHHHHHHHHcCcEEEEECC
Confidence 344579999999999973 2 899999999999999888 89999966 4555554 333345667788999999875
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ |+++++++|+ +++++|++.+++|++|.+.|+++| ++|+++|+++|+|+++..+....++. .
T Consensus 130 ~------d~~~l~~~l~--------~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~~~l~---~ 192 (418)
T TIGR01326 130 D------DPEEFEKAID--------ENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLCRPID---H 192 (418)
T ss_pred C------CHHHHHHhcC--------cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcCCchh---c
Confidence 3 7889999887 689999999999999999999999 99999999999999987663233332 3
Q ss_pred CCcEEEeccCccCCCCCCceEEEEEeCc
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFVKKS 363 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v~~~ 363 (588)
.+|+++.|++|++|.+...+|+++++++
T Consensus 193 g~Divv~S~sK~l~g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 193 GADIVVHSATKYIGGHGTAIGGVIVDGG 220 (418)
T ss_pred CCeEEEECccccccCCccceEEEEEecc
Confidence 4899999999988832233888888654
No 200
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.80 E-value=1.5e-17 Score=176.04 Aligned_cols=301 Identities=17% Similarity=0.092 Sum_probs=194.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....+++.++++++.|++ + .+.+++++.|+.+++.++ +++||+|++...++...+.++...+...|+++++++++
T Consensus 63 ~P~~~~lE~~la~leg~~---~-av~~sSG~aAi~~al~al-l~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~ 137 (384)
T PRK06434 63 NPTVQAFEEKYAVLENAE---H-ALSFSSGMGAITSAILSL-IKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTD 137 (384)
T ss_pred ChhHHHHHHHHHHHhCCC---c-EEEeCCHHHHHHHHHHHH-hCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCC
Confidence 456678899999999984 3 677778889999999999 99999987666655556767667788899999999886
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFK 336 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~ 336 (588)
+. +.+. ++ .+++++|++.+++|+++...|+++| ++||++| ++||+++..|....+++ ..
T Consensus 138 -~~-----~~~~--l~-------~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~pl~---~g 197 (384)
T PRK06434 138 -RL-----NSLD--FD-------PSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQNPLD---LG 197 (384)
T ss_pred -Ch-----hhee--ec-------CCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccCCchh---cC
Confidence 21 1222 33 1478999999999999999999999 9999998 57799987775445555 34
Q ss_pred CcEEEeccCccCCCCCCc--eEEEEEeCc-chhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhH
Q 037063 337 PDFLICSFYKIFGENPSG--FGCLFVKKS-SASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSK 413 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G--~G~L~v~~~-~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~ 413 (588)
+|++++|.+|+++. +.+ .|+++.+++ +.+++...... .|. ..+ .+
T Consensus 198 aDivv~S~tK~i~G-~~d~~gG~vv~~~~~~~~~~~~~~~~-~G~-------------------------~~~--~~--- 245 (384)
T PRK06434 198 ADVVIHSATKYISG-HSDVVMGVAGTNNKSIFNNLVERRKT-LGS-------------------------NPD--PI--- 245 (384)
T ss_pred CCEEEeecccccCC-CCCceEEEEecCcHHHHHHHHHHHHh-cCC-------------------------CCC--HH---
Confidence 99999999998863 443 566656443 33333311100 010 000 01
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCC------CCCcccEEEEEeecCCCC
Q 037063 414 LVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKV------MFDRGPSLAFNVFDWNGT 486 (588)
Q Consensus 414 ~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~------~~~rg~iv~f~~~~~~g~ 486 (588)
.+ ..++..++. ++.+.+|..+.+..+.+.|... |.| +|+-|.- ...-|++++|.+.+
T Consensus 246 ~A-~l~~~gL~t--L~~R~~r~~~~a~~~a~~L~~~---------p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~---- 309 (384)
T PRK06434 246 QA-YLALRGLKT--LGLRMEKHNKNGMELARFLRDS---------KKISNVYYPDTEIGKKVLRGFGGMLSFELRS---- 309 (384)
T ss_pred HH-HHHHhCCCc--HHHHHHHHHHHHHHHHHHHHcC---------CCccEEECCChHHHHHhcCCCCceEEEEECC----
Confidence 11 122333333 4666777788888888888863 444 4555531 11347899999864
Q ss_pred CcCHHHHHHHHHhCCcE---ecccc----ccCcccccchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCCCCCHHHHHH
Q 037063 487 RIDPALVQKLADRHNIS---LSCGF----LQNIFFSGEYEQERVRVLETRSGTNETRSGV--SVVTAALGCLTNFEDTYR 557 (588)
Q Consensus 487 ~i~~~~v~~~l~~~gI~---v~~G~----~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~~t~eDv~~ 557 (588)
.+.+.+++++..+. ++-|. .|+|.....+. ..... .. ..|+ +.||+|+|. ||++.
T Consensus 310 ---~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~-~~~e~-~~-------~~gi~~~liRlsvGl----Ed~~d 373 (384)
T PRK06434 310 ---MEDVHKFIRNLEIPMVAASLGGVESLITLPVETSHSS-LSPEE-RE-------RLGISDNLVRFSIGI----EDIDD 373 (384)
T ss_pred ---HHHHHHHHHhCCcceEccCCCCCCeeeECCCcccccc-CCHHH-HH-------hcCCCcCeEEEEeCc----CCHHH
Confidence 44556677665542 33332 12221111000 00000 01 1343 389999997 88999
Q ss_pred HHHHHHHhhh
Q 037063 558 LWAFVSRFLD 567 (588)
Q Consensus 558 li~~l~~~l~ 567 (588)
|++-|.+.|+
T Consensus 374 Li~dl~~Al~ 383 (384)
T PRK06434 374 LIKDIENALS 383 (384)
T ss_pred HHHHHHHHhc
Confidence 9988888775
No 201
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.80 E-value=2.8e-17 Score=176.51 Aligned_cols=309 Identities=13% Similarity=0.099 Sum_probs=188.5
Q ss_pred HHHHHHHHHh----CCCCCCc-eEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 183 KIRKRIMDFM----NISEDDY-TLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~e~-~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
++|+.|++++ |.+.+.. .|++|+|+++|+.+++..+ .++||.|++....+.. ....++..|++++.++++
T Consensus 75 ~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~~ 149 (403)
T PRK08636 75 KLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAI-TNPGDVAIVPDPAYPI----HSQAFILAGGNVHKMPLE 149 (403)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHh-CCCCCEEEEcCCCCcc----hHHHHHhcCCEEEEEecc
Confidence 4555555554 6433323 4999999999999999999 8999998765544331 234566789999999885
Q ss_pred C-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCc--C--CCCCC
Q 037063 258 W-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATAL--G--SKDMD 328 (588)
Q Consensus 258 ~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~--~--~~d~~ 328 (588)
. .+..+|.+++.+.+.+. .+....+++++++++++||||..++.++ | ++|+++++++|+|.+-. . +....
T Consensus 150 ~~~~~~~d~~~l~~~l~~~-~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~ 228 (403)
T PRK08636 150 YNEDFELDEDQFFENLEKA-LRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTP 228 (403)
T ss_pred ccccCccChhhhhhHHHHH-HhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCC
Confidence 3 33578887654443310 0011257899999999999999999877 4 77899999999999822 1 11011
Q ss_pred C-CCCCCC-CCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 329 T-LGLSLF-KPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 329 ~-l~l~~~-~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
+ ..+... ..-+++.|+.|.||.+..++|+++.++++++.+...... . ..++..
T Consensus 229 ~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li~~~~~~~~~----~---------------------~~~~~~ 283 (403)
T PRK08636 229 SILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVGALKKIKSW----L---------------------DYGMFT 283 (403)
T ss_pred ChhcCCCccccEEEEEecccccCCccceeeeeeCCHHHHHHHHHHHHH----h---------------------cccCCh
Confidence 1 111111 123457899999986567799999888877665432210 0 011122
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGT 486 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~ 486 (588)
+.+. ++..+++..... ++++.+..+...+.+.+.|... ++.+..| ..|..+-+.+++.. .
T Consensus 284 ~~q~----~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~----------~~~~~~p----~~g~~~~~~l~~~~-~ 343 (403)
T PRK08636 284 PIQV----AATIALDGDQSC-VEEIRETYRKRRDVLIESFANA----------GWELQKP----RASMFVWAKIPEPA-R 343 (403)
T ss_pred HHHH----HHHHHHhCcHHH-HHHHHHHHHHHHHHHHHHHHHC----------CCcccCC----CcceEEEEECCCcc-C
Confidence 2221 111233211111 4555566666667777777763 2333332 12334444443210 0
Q ss_pred CcCHHHH-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 487 RIDPALV-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 487 ~i~~~~v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
.++...+ .+++++.||.+.+|.... . .+.+++||+++ .+.+++++.++.|+++
T Consensus 344 ~~~~~~l~~~ll~~~gV~v~pg~~f~----------------~--------~~~~~iRi~~~--~~~~~l~~~~~rl~~~ 397 (403)
T PRK08636 344 HLGSLEFSKQLLTEAKVAVSPGIGFG----------------E--------YGDEYVRIALI--ENENRIRQAARNIKKF 397 (403)
T ss_pred CCCHHHHHHHHHHhCCEEEecchhhC----------------c--------CCCCeEEEEec--CCHHHHHHHHHHHHHH
Confidence 1233444 466778999999884331 0 12239999997 5789999999999988
Q ss_pred hhh
Q 037063 566 LDA 568 (588)
Q Consensus 566 l~~ 568 (588)
++.
T Consensus 398 l~~ 400 (403)
T PRK08636 398 LKE 400 (403)
T ss_pred HHh
Confidence 865
No 202
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.80 E-value=8e-17 Score=171.26 Aligned_cols=330 Identities=12% Similarity=0.042 Sum_probs=205.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+++.+.+++++|++ .+++|+|+|+|+.+++..+.+++||+|+++ ..|++ . ...++..|++++.+++
T Consensus 30 ~~~~~~~e~~la~~~g~~----~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~-~----~~~~~~~G~~~v~~d~ 100 (375)
T PRK11706 30 GGFTRRCQQWLEQRFGSA----KVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVS-T----ANAFVLRGAKIVFVDI 100 (375)
T ss_pred CHHHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHH-H----HHHHHHcCCEEEEEec
Confidence 356678889999999983 399999999999998887768999997754 44443 2 3345668999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC--CCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK--DMDTLGLS 333 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~--d~~~l~l~ 333 (588)
+..++.+|+++++++++ +++++|++.| ++|...++++| ++|+++|++||+|+++..+. +-.+++
T Consensus 101 d~~~~~~d~~~le~~i~--------~~tk~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g-- 167 (375)
T PRK11706 101 RPDTMNIDETLIEAAIT--------PKTRAIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALG-- 167 (375)
T ss_pred CCCcCCcCHHHHHHhcC--------CCCeEEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeee--
Confidence 85556789999999998 6789888764 59999999999 99999999999999987762 112222
Q ss_pred CCCCcEEEeccC--ccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 334 LFKPDFLICSFY--KIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 334 ~~~~D~vv~S~~--K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
. -.|+-++||| |.++. +.| |+++++ +++.++++..... |......... . .... .+...|+.....-
T Consensus 168 ~-~~~~~~~Sf~~~K~l~~-g~g-G~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~----~-~~~~-~~~~~g~~~~~~~ 236 (375)
T PRK11706 168 T-IGHIGCFSFHETKNYTA-GEG-GALLINDPALIERAEIIREK--GTNRSQFFRG----Q-VDKY-TWVDIGSSYLPSE 236 (375)
T ss_pred c-CcCEEEEeCCCCccccc-cCC-eEEEECCHHHHHHHHHHHHc--CCCcchhhcc----C-CCcc-eeeecccccCcCH
Confidence 1 1488999999 98873 233 555554 4555555443322 1100000000 0 0000 0102344333221
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeC-CCCCCCcccEEEEEeecCCCCCcC
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYG-PKVMFDRGPSLAFNVFDWNGTRID 489 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~-p~~~~~rg~iv~f~~~~~~g~~i~ 489 (588)
.....++..++. ++.+.++.+++.+++.+.|.++.. ...+++.. +........++.+.+.+ + .+
T Consensus 237 ---~~aa~~~~ql~~--l~~~~~~R~~~~~~~~~~L~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~ 301 (375)
T PRK11706 237 ---LQAAYLWAQLEA--ADRINQRRLALWQRYYDALAPLAE------AGRIELPSIPDDCKHNAHMFYIKLRD--L--ED 301 (375)
T ss_pred ---HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhcCCCc------CCeeecCCCCCCCceeeEEEEEEECC--c--CC
Confidence 122244555555 578888888999999999987521 01233221 11101112233344432 1 35
Q ss_pred HHHHHHHHHhCCcEeccccccC---cccccc----hHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHH
Q 037063 490 PALVQKLADRHNISLSCGFLQN---IFFSGE----YEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 490 ~~~v~~~l~~~gI~v~~G~~c~---~~~~~~----~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l 562 (588)
.+.+.+.|.++||.++.+.... +.+... ..-.....+.. ..|.+.++..-+.+|++++++.|
T Consensus 302 r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~-----------~~l~lP~~~~l~~~~~~~i~~~i 370 (375)
T PRK11706 302 RSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESE-----------RLLRLPLFYNLTDVEQRTVIDTI 370 (375)
T ss_pred HHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHh-----------CcEeccCCCCCCHHHHHHHHHHH
Confidence 7888999999999987543111 100000 00000111111 27888889888999999999999
Q ss_pred HHhh
Q 037063 563 SRFL 566 (588)
Q Consensus 563 ~~~l 566 (588)
++++
T Consensus 371 ~~~~ 374 (375)
T PRK11706 371 LEFF 374 (375)
T ss_pred HHHh
Confidence 9875
No 203
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=2e-17 Score=174.69 Aligned_cols=283 Identities=13% Similarity=0.114 Sum_probs=182.8
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCC-C
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWP-N 260 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~-~ 260 (588)
.++|+.|++++++++++ |++|+|+++++.+++.++ +++||+|++....+. .+ ...++..|++++.++++.. +
T Consensus 68 ~~lr~~ia~~~~~~~~~--I~it~G~~~al~~~~~~~-~~~gd~V~v~~P~y~-~~---~~~~~~~g~~~~~~~l~~~~~ 140 (357)
T PRK14809 68 ADLTAALADRWDVSPEQ--VWLANGGDGALDYLARAM-LDPGDTVLVPDPGFA-YY---GMSARYHHGEVREYPVSKADD 140 (357)
T ss_pred HHHHHHHHHHhCCCcce--EEECCCHHHHHHHHHHHh-cCCCCEEEEeCCChH-HH---HHHHHHcCCeEEEEecccCcC
Confidence 48999999999998765 999999999999999999 899999776554432 12 2244567999999988632 3
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc--CcEEEEeCCCcC-CCCCCCCC-CCCC
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK--GWHVLLDATALG-SKDMDTLG-LSLF 335 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~--g~~vvvDaa~~~-~~d~~~l~-l~~~ 335 (588)
..++.+++++.+. +++++++++++||||..+|.+++ ++++.. ++++|+|.+..- ..+...+. +...
T Consensus 141 ~~~~~~~~~~~~~---------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~ 211 (357)
T PRK14809 141 FEQTADTVLDAYD---------GERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEER 211 (357)
T ss_pred CCcCHHHHHHhhc---------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhC
Confidence 4456666655432 57899999999999999999998 766643 789999998321 10011111 1111
Q ss_pred CCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHH
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLV 415 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~a 415 (588)
.--+++.||.|.||.+..++|+++.++++++.+...... . +...+.. .+
T Consensus 212 ~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~--~-------------------------~~~~~~~----~~ 260 (357)
T PRK14809 212 DDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARVNTP--F-------------------------AASELAC----RA 260 (357)
T ss_pred CCEEEEecchhHhcCcchhheeeecCHHHHHHHHHhCCC--C-------------------------CCCHHHH----HH
Confidence 123678899999985445699999998887766533211 0 0001111 11
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHH
Q 037063 416 ECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQK 495 (588)
Q Consensus 416 l~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~ 495 (588)
...+|+. ... +++..+..+...+++.+.|... .+ | ..|..+.+.+. +...+.+
T Consensus 261 a~~~l~~-~~~-~~~~~~~~~~~r~~l~~~L~~~-------------~~-~----~~g~f~~~~~~-------~~~~~~~ 313 (357)
T PRK14809 261 GLAALDD-DEH-VERTVETARWAREYIREELDAP-------------TW-E----SAGNFVLAEVG-------DASAVAE 313 (357)
T ss_pred HHHHhCC-HHH-HHHHHHHHHHHHHHHHHHhcCc-------------cC-C----CCCCEEEEECC-------CHHHHHH
Confidence 2233321 111 3344444455555565555431 11 1 23445544442 2456777
Q ss_pred HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 496 LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 496 ~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
.|.++||.++.|..+. .. ++||+|++ +.++++++++.|+++++
T Consensus 314 ~l~~~gv~v~~g~~f~------------------------~~--~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 314 AAQERGVIVRDCTSFG------------------------LP--ECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred HHHHCCEEEEECccCC------------------------CC--CeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 7888999999884321 01 28999976 57999999999998875
No 204
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=2.5e-17 Score=172.64 Aligned_cols=206 Identities=14% Similarity=0.152 Sum_probs=146.5
Q ss_pred CeeeecCCCCC-CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 111 NYVCFDYIGHG-LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 111 ~~vyLD~a~~g-l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
+.++||++... ..|..+++++.+.+...... .|.. .-..++|+.|+
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~Y~~---~g~~~lr~~ia 65 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKRVPFN------------------------------RYPH---ITSDPLREAIA 65 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhcCccc------------------------------cCCC---CCHHHHHHHHH
Confidence 56899988877 45677777765544210000 0110 01358999999
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHH
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLM 269 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~ 269 (588)
+++|+++++ |++|+|+++++.+++..+ +||+|++....+. .+ ...++..|++++.++.+ .++.++.++++
T Consensus 66 ~~~~~~~~~--I~~t~G~~~~l~~~~~~~---~gd~V~v~~P~y~-~~---~~~~~~~g~~~~~v~~~-~~~~~d~~~l~ 135 (337)
T PRK03967 66 EFYGLDAEN--IAVGNGSDELISYLVKLF---EGKHIVITPPTFG-MY---SFYAKLNGIPVIDVPLK-EDFTIDGERIA 135 (337)
T ss_pred HHhCcCcce--EEEcCCHHHHHHHHHHHh---CCCeEEEeCCChH-HH---HHHHHHcCCeEEEeecC-CCCCcCHHHHH
Confidence 999998765 999999999999998876 5899776554433 12 34557789999999987 55678998888
Q ss_pred HHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCc--CCCCCCCCCCCCCCCcEEEeccCc
Q 037063 270 KKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATAL--GSKDMDTLGLSLFKPDFLICSFYK 346 (588)
Q Consensus 270 ~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~--~~~d~~~l~l~~~~~D~vv~S~~K 346 (588)
+.+ ++++++++++++||||..+|.++| ++++ +|+++|+|.+.. .+.....+ ++...--+++.|+.|
T Consensus 136 ~~~---------~~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~-~~~~~~vi~l~S~SK 204 (337)
T PRK03967 136 EKA---------KNASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSGKSLIGL-IDEYPNLILLRTFSK 204 (337)
T ss_pred Hhc---------cCCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcccchHHH-HhhCCCEEEEecchH
Confidence 754 367889999999999999999999 7774 799999999843 22111111 111112367789999
Q ss_pred cCCCCCCceEEEEEeCcchhcccC
Q 037063 347 IFGENPSGFGCLFVKKSSASVLSG 370 (588)
Q Consensus 347 ~~G~~P~G~G~L~v~~~~~~~l~~ 370 (588)
.||.+..++|++++++++++.+..
T Consensus 205 ~~~l~GlRiG~iv~~~~~i~~~~~ 228 (337)
T PRK03967 205 AFGLAGIRAGYAIANEEIIDALYR 228 (337)
T ss_pred hhcchhhhheeeecCHHHHHHHHh
Confidence 998545679999998887776653
No 205
>PRK04311 selenocysteine synthase; Provisional
Probab=99.80 E-value=1.1e-16 Score=172.79 Aligned_cols=214 Identities=17% Similarity=0.205 Sum_probs=153.9
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
.+.+|+++.|.+++|+.+++++.+.+.. +.|.+ | ++. .| +..+.++.+++.++
T Consensus 85 tg~v~~tNlg~s~l~~~v~eav~~~~~~--~~~le-------------~-------~l~----~g-~~g~r~~~~e~~lA 137 (464)
T PRK04311 85 TGVVLHTNLGRALLSEAAIEAVTEAARG--YSNLE-------------Y-------DLA----TG-KRGSRDRALAALLC 137 (464)
T ss_pred CccEEeccCCCCCCCHHHHHHHHHHHhc--ccccc-------------c-------chh----hc-ccchHHHHHHHHHH
Confidence 4778999999999999999998655421 21210 0 010 01 12456789999999
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCch--hHHHHHHHHHHhcCCEEEEEeccCCCCccCHH
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHEN--EAAALMIESSKKRGARVSSAEFAWPNLRIHSG 266 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s--~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e 266 (588)
+++|++ + .++++|++.|+.+++.+ +.+||+|++. .++.. .+.. +...++..|+++++++.+ ...+++
T Consensus 138 ~l~Gae--~--a~vv~sgtaAl~l~l~~--l~~GdeVIvs~~e~~~~ggs~~-i~~~~~~~G~~l~~v~~~---~~t~~~ 207 (464)
T PRK04311 138 ALTGAE--D--ALVVNNNAAAVLLALNA--LAAGKEVIVSRGELVEIGGAFR-IPDVMRQAGARLVEVGTT---NRTHLR 207 (464)
T ss_pred HHhCCC--e--EEEECCHHHHHHHHHHH--hCCCCEEEEcchhhhhcCcchh-hHHHHHHCCcEEEEECCC---CCCCHH
Confidence 999984 2 67788888999998866 5789996654 44542 1222 234557789999998764 346789
Q ss_pred HHHHHHhhhccccCCCcceEEEEeCCCCC--CC--ccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCC------CCCC---
Q 037063 267 KLMKKIVGKRKKKKKKKRGLFVFPLQSKV--TG--ARYSYMWM-SVAAEKGWHVLLDATALGSKDMD------TLGL--- 332 (588)
Q Consensus 267 ~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~--tG--~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~------~l~l--- 332 (588)
+++++|+ ++|++|.+.|.+|+ +| ...|+++| ++||++|+++++|+++..-.+.. ...+
T Consensus 208 dle~aI~--------~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~ 279 (464)
T PRK04311 208 DYEQAIN--------ENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQEL 279 (464)
T ss_pred HHHHhcC--------ccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhH
Confidence 9999998 78999999999997 45 57899999 99999999999999531100010 1111
Q ss_pred CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccC
Q 037063 333 SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSG 370 (588)
Q Consensus 333 ~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~ 370 (588)
-..++|++++|+||++|. | ..|+++++++++++++.
T Consensus 280 l~~GaDiv~fSg~K~LgG-p-~~G~i~g~~~li~~l~~ 315 (464)
T PRK04311 280 LAAGVDLVTFSGDKLLGG-P-QAGIIVGKKELIARLKK 315 (464)
T ss_pred HhcCCcEEEecCcccccC-C-ceEEEEEcHHHHHHHhh
Confidence 124599999999998873 6 58999999998887763
No 206
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.80 E-value=1.1e-16 Score=172.45 Aligned_cols=214 Identities=15% Similarity=0.185 Sum_probs=152.6
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
.+.+|+++.|.+++|+.+++++.+.+.. ++|.+ | ++.. | .....++.+++.++
T Consensus 80 tg~v~~tNlg~s~l~~~vieAv~~~~~~--y~~l~-------------~-------~l~~----g-~~g~r~~~le~~lA 132 (454)
T TIGR00474 80 TGVVLHTNLGRAPLAEEAIEAVTDAARG--YSNLE-------------Y-------DLET----G-KRGSRYSHVEGLLC 132 (454)
T ss_pred CCcEEeccCCCCCCCHHHHHHHHHHHhc--ccchh-------------c-------cccc----c-ccchHHHHHHHHHH
Confidence 4679999999999999999998766532 22220 0 0100 1 11455789999999
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCch--hHHHHHHHHHHhcCCEEEEEeccCCCCccCHH
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHEN--EAAALMIESSKKRGARVSSAEFAWPNLRIHSG 266 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s--~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e 266 (588)
+++|++. .++++|++.|+.+++.+ +.+||+|++. .+|.. .+.. +...++..|+++++++.+ ...+.+
T Consensus 133 ~l~gae~----alvv~sg~aAi~l~l~~--l~~GdeVIvs~~e~v~~ggs~~-i~~~~~~~G~~~~~v~~~---~~~~l~ 202 (454)
T TIGR00474 133 ELTGAED----ALVVNNNAAAVLLALNT--LAKGKEVIVSRGELVEIGGSFR-IPDVMEQSGAKLVEVGTT---NRTHLK 202 (454)
T ss_pred HHhCCCc----EEEECCHHHHHHHHHHH--hCCcCEEEECCChhhhhcchhh-HHHHHHHcCCEEEEeCCC---CCCCHH
Confidence 9999952 44567788899988865 6899997654 44421 1111 124456789999998764 245789
Q ss_pred HHHHHHhhhccccCCCcceEEEEeCCCCCC--C--ccCCHHHH-HHHHHcCcEEEEeCCCcCCCC-------CCCC--CC
Q 037063 267 KLMKKIVGKRKKKKKKKRGLFVFPLQSKVT--G--ARYSYMWM-SVAAEKGWHVLLDATALGSKD-------MDTL--GL 332 (588)
Q Consensus 267 ~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~t--G--~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d-------~~~l--~l 332 (588)
+++++|+ ++|++|++.|.+|++ | ...|+++| ++||++|+++++|++...-.+ ..+. +.
T Consensus 203 dle~aI~--------~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~ 274 (454)
T TIGR00474 203 DYEDAIT--------ENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEV 274 (454)
T ss_pred HHHHhcC--------cCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccH
Confidence 9999998 789999999999984 6 58899999 999999999999986211000 1111 22
Q ss_pred CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccC
Q 037063 333 SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSG 370 (588)
Q Consensus 333 ~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~ 370 (588)
...++|++++|+||++|. | ..|+++++++.++.++.
T Consensus 275 ~~~GaDiv~fSg~K~LgG-p-~~G~i~g~~~~i~~l~~ 310 (454)
T TIGR00474 275 IAAGVDLVTFSGDKLLGG-P-QAGIIVGKKELIERLKK 310 (454)
T ss_pred hHcCCCEEEecCccccCC-C-eEEEEEECHHHHHhhhh
Confidence 234599999999998873 6 47999999988876654
No 207
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.80 E-value=2.9e-17 Score=176.68 Aligned_cols=278 Identities=16% Similarity=0.122 Sum_probs=196.8
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--CC---------CCC--eEEEcCCCchhHHHHHHHHH
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--FY---------SNP--RLLTVYDHENEAAALMIESS 244 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--~~---------~gd--~ll~~~e~~s~~~~~~~~~a 244 (588)
..+++++-..+++++|.+ ++..-.||+|+|+|+-+.+.+.. +. +++ +|+++...|. + + .+.+
T Consensus 100 ~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~-s--~-~Kaa 174 (460)
T COG0076 100 AELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHF-S--F-EKAA 174 (460)
T ss_pred HHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchh-H--H-HHHH
Confidence 788999999999999997 55679999999999876555432 10 111 4776665553 1 2 6778
Q ss_pred HhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceE--EEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCC
Q 037063 245 KKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGL--FVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATA 321 (588)
Q Consensus 245 ~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~L--v~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~ 321 (588)
+..|.+++.++.+..+.++|+++|+++|+ +.+.. |+.+..++.+|.+-|+++| ++|+++++++|||||-
T Consensus 175 ~~lG~~~~~v~~~~~~~~id~~~l~~~i~--------~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~ 246 (460)
T COG0076 175 RYLGLGLRRVPTVPTDYRIDVDALEEAID--------ENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAF 246 (460)
T ss_pred HHhCCCceeEEeccCccccCHHHHHHHHH--------hhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccc
Confidence 88999999999984479999999999999 44544 8889999999999999999 9999999999999993
Q ss_pred cC---CC-CC-CCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCc-chhcc---cCCCCCCCceEeeecCCCcccccc
Q 037063 322 LG---SK-DM-DTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKS-SASVL---SGSTSSVSTIMGIEPSFSEIIELE 392 (588)
Q Consensus 322 ~~---~~-d~-~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~-~~~~l---~~~~~g~~g~v~~~~~~~~~~~~~ 392 (588)
.+ |. +. ..++....++|.+++++||++.. |.|+|++++|++ ...+. ..++.++ +.. +
T Consensus 247 GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~a-P~~~G~il~rd~e~l~~~~~~~~~yl~~-~~~---~--------- 312 (460)
T COG0076 247 GGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLA-PIGCGVVLFRDEEALRRILIFADYYLPG-GGI---P--------- 312 (460)
T ss_pred cceeecccCccchhhcCCCCceEEEECcccccCC-CCCceEEEEECHHHhhhhhhcccccCCC-CCc---C---------
Confidence 33 31 11 22244455699999999997775 999999999997 33322 1222221 110 0
Q ss_pred cccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCc
Q 037063 393 TLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDR 472 (588)
Q Consensus 393 ~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~r 472 (588)
-+...||.+-.. .++....+..+-.-|+.++.++..++++++.++|.++ +.+++..+ ..
T Consensus 313 -----~~ti~~sr~~~~---~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~---------~~~e~~~~----p~ 371 (460)
T COG0076 313 -----NFTILGSRPGRQ---ALALYANLRRLGREGYRKLLDRTLELARYLAEELEKL---------GDFELVNE----PE 371 (460)
T ss_pred -----ceeEeeccchHH---HHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhC---------CCcEeecC----Cc
Confidence 010122222222 2455566777655578999999999999999999995 55788775 35
Q ss_pred ccEEEEEeecCCCCCcCHHHHHHHHHhCCcEecc
Q 037063 473 GPSLAFNVFDWNGTRIDPALVQKLADRHNISLSC 506 (588)
Q Consensus 473 g~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~ 506 (588)
.++|+|..++... ........+++.|..+..
T Consensus 372 l~~V~fr~~~~~~---~~~~~~~~~~~~gw~v~~ 402 (460)
T COG0076 372 LPIVAFRLKDDED---TLADLSERLDRRGWQVPA 402 (460)
T ss_pred cceEEEEcCCccc---chhchHHHHHhcCceeec
Confidence 7999999965321 123344556667777653
No 208
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.79 E-value=9.1e-17 Score=173.47 Aligned_cols=337 Identities=13% Similarity=0.123 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhC--------CCCCCCeEEE-cCCCchhHHHHHHHHHHhcCC
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESY--------PFYSNPRLLT-VYDHENEAAALMIESSKKRGA 249 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~--------~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~ 249 (588)
....+.++.+++++|++ .+++++|+|+|+.+++.++ .+++||+|++ ...|.+ .. ..+...|+
T Consensus 63 ~~~~~fe~~lA~~~g~~----~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a-~~----~~v~~~G~ 133 (438)
T PRK15407 63 RFNDAFEKKLAEFLGVR----YALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPT-TV----NPIIQNGL 133 (438)
T ss_pred hhHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHH-HH----HHHHHcCC
Confidence 34678999999999984 2899999999999988876 5789999664 555654 22 23345799
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCC
Q 037063 250 RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMD 328 (588)
Q Consensus 250 ~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~ 328 (588)
+++.++++..++.+|+++++++++ ++|++|++++. .|...++++| ++|+++|++||+|++|+.+....
T Consensus 134 ~pv~vdvd~~~~~id~~~le~~i~--------~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~ 202 (438)
T PRK15407 134 VPVFVDVELPTYNIDASLLEAAVS--------PKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYD 202 (438)
T ss_pred EEEEEecCCCcCCcCHHHHHHHcC--------cCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcC
Confidence 999999975677899999999998 78999999885 7899999999 99999999999999998872112
Q ss_pred CCCCCCCCCcEEEeccC--ccCCCCCCceEEEEEeCcchh-cccCCCCCCCceEee-ecCCC-----ccc----cccccc
Q 037063 329 TLGLSLFKPDFLICSFY--KIFGENPSGFGCLFVKKSSAS-VLSGSTSSVSTIMGI-EPSFS-----EII----ELETLD 395 (588)
Q Consensus 329 ~l~l~~~~~D~vv~S~~--K~~G~~P~G~G~L~v~~~~~~-~l~~~~~g~~g~v~~-~~~~~-----~~~----~~~~~~ 395 (588)
.-.+..+ -|+.++||| |.+.. ..| |+++++++.+. +++..... |.... .+... ... .+....
T Consensus 203 g~~~G~~-gd~~~fSf~~~k~~~~-geG-G~l~t~d~~l~~~~~~~~~~--G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (438)
T PRK15407 203 GRMTGTF-GDIATLSFYPAHHITM-GEG-GAVFTNDPLLKKIIESFRDW--GRDCWCAPGCDNTCGKRFGWQLGELPFGY 277 (438)
T ss_pred Ceeeecc-CceEEEeCCCCCCccc-cCc-eEEEECCHHHHHHHHHHHHh--Ccccccccccccccccccccccccccccc
Confidence 1111122 399999998 43432 234 89999886553 33222111 11000 00000 000 000000
Q ss_pred cccc--ccCCC-CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCe-EEEeCCCCCCC
Q 037063 396 ESSQ--SKFPE-SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPL-VRIYGPKVMFD 471 (588)
Q Consensus 396 ~~~f--~e~GT-~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~-v~i~~p~~~~~ 471 (588)
...+ .+.|. ..+..+ ....++..++. ++.+.++.+++++++.+.|..+ ++ +.+..+.. ..
T Consensus 278 ~~~~~~~~~G~n~rmsel----~AAig~~qL~~--l~~~~~~R~~~a~~y~~~L~~~---------~~~~~~~~~~~-~~ 341 (438)
T PRK15407 278 DHKYTYSHLGYNLKITDM----QAAIGLAQLEK--LPGFIEARKANFAYLKEGLASL---------EDFLILPEATP-NS 341 (438)
T ss_pred cccccccccccccCccHH----HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhccC---------CCccccCcCCC-CC
Confidence 0001 12332 222222 22356677777 4888888899999999999874 32 22211111 11
Q ss_pred cccEEEEEeecCCCCCcCHHHHHHHHHhCCcEecccc--ccC--cccccc-h----HHHHHHHHhhhcCCCCCcCCccEE
Q 037063 472 RGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGF--LQN--IFFSGE-Y----EQERVRVLETRSGTNETRSGVSVV 542 (588)
Q Consensus 472 rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~--~c~--~~~~~~-~----~~~~~~~l~~~~~~~~~~~g~~~v 542 (588)
......|.+.-.++..++.+.+.+.|.++||..+... .|+ +.+... + .-.....+. ...|
T Consensus 342 ~~~~~~~~i~~~~~~~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~-----------~~~l 410 (438)
T PRK15407 342 DPSWFGFPITVKEDAGFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIM-----------NDTF 410 (438)
T ss_pred eeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHH-----------hCeE
Confidence 2222233332111122567889999999999876532 111 111000 0 000011111 1268
Q ss_pred EEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 543 TAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 543 RvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
-+-++..-|.+||+++++.|++++.
T Consensus 411 ~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 411 WIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred EecCCCCCCHHHHHHHHHHHHHHHh
Confidence 8888888899999999999999875
No 209
>PRK08068 transaminase; Reviewed
Probab=99.79 E-value=4.1e-17 Score=174.45 Aligned_cols=293 Identities=11% Similarity=0.037 Sum_probs=184.6
Q ss_pred HHHHHHHHHHh----C--CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 182 SKIRKRIMDFM----N--ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 182 ~~~r~~ia~~l----g--a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++|+.|++++ | ++++ .+|++|+|+++++.+++..+ +++||+|++....+... ...++..|++++.++
T Consensus 73 ~~lr~aia~~~~~~~g~~~~~~-~~i~it~G~~~~l~~~~~~~-~~~gd~vlv~~P~y~~~----~~~~~~~g~~~~~i~ 146 (389)
T PRK08068 73 PFLKEAAADFYKREYGVTLDPE-TEVAILFGGKAGLVELPQCL-MNPGDTILVPDPGYPDY----LSGVALARAQFETMP 146 (389)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC-ccEEEcCCcHHHHHHHHHHh-CCCCCEEEEcCCCCcch----HHHHHhcCCEEEEee
Confidence 36677777765 5 4444 14999999999999999998 79999977654443322 334567899999999
Q ss_pred ccCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCcC-CCC---
Q 037063 256 FAWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATALG-SKD--- 326 (588)
Q Consensus 256 ~~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~~-~~d--- 326 (588)
.+.+ +..+|.+++++.+. +++++|+++.++||||..+|.+++ ++|++++++||+|.+..- ..+
T Consensus 147 ~~~~~~~~~d~~~l~~~~~--------~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~ 218 (389)
T PRK08068 147 LIAENNFLPDYTKIPEEVA--------EKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQK 218 (389)
T ss_pred cccccCCCCCHHHHHHhcc--------ccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCC
Confidence 8733 34578899998886 578999999999999999998764 678999999999998421 111
Q ss_pred CCC-CCCC-CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 327 MDT-LGLS-LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 327 ~~~-l~l~-~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
..+ +.+. .....+++.|+.|.||.+..++|+++.++++++.+...... + ..++
T Consensus 219 ~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~~~------------------------~-~~~~ 273 (389)
T PRK08068 219 PVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDH------------------------L-FVSL 273 (389)
T ss_pred CcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHHHHHHhh------------------------c-cCCC
Confidence 101 1111 12245788999999985455699999988887766432211 0 0111
Q ss_pred CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE-EEEEeecC
Q 037063 405 SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS-LAFNVFDW 483 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i-v~f~~~~~ 483 (588)
++..+ .++..++..-.+. ++...++.+..++++.+.|.++ ++.++.| .++. +-+.+.+.
T Consensus 274 ~~~~q----~~~~~~l~~~~~~-~~~~~~~~~~~r~~~~~~L~~~----------g~~~~~~-----~g~~~~~v~~~~~ 333 (389)
T PRK08068 274 FGAIQ----DAAIEALLSDQSC-VAELVARYESRRNAFISACREI----------GWEVDAP-----KGSFFAWMPVPKG 333 (389)
T ss_pred ChHHH----HHHHHHHhCcHHH-HHHHHHHHHHHHHHHHHHHHHC----------CCcccCC-----CeeEEEEEECCCC
Confidence 11111 1112222110111 4556666777777888888764 2333322 3444 33444431
Q ss_pred CCCCcCHHHHHHHHH-hCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHH
Q 037063 484 NGTRIDPALVQKLAD-RHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 484 ~g~~i~~~~v~~~l~-~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l 562 (588)
++...+.+.+. ++||.++.|.... . .+.++||++++. ..+.+...++.|
T Consensus 334 ----~~~~~~~~~l~~~~gi~v~pg~~f~----------------~--------~~~~~iRi~~~~--~~~~l~~al~~l 383 (389)
T PRK08068 334 ----YTSEQFADLLLEKAHVAVAPGNGFG----------------E--------HGEGYVRVGLLT--DEERLREAVERI 383 (389)
T ss_pred ----CCHHHHHHHHHHhCCEEEecchHhC----------------c--------cCCCeEEEEEcC--CHHHHHHHHHHH
Confidence 35666666554 5799999874321 0 122389999973 445555555444
Q ss_pred H
Q 037063 563 S 563 (588)
Q Consensus 563 ~ 563 (588)
+
T Consensus 384 ~ 384 (389)
T PRK08068 384 G 384 (389)
T ss_pred H
Confidence 4
No 210
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.79 E-value=4.4e-17 Score=175.24 Aligned_cols=302 Identities=13% Similarity=0.083 Sum_probs=186.0
Q ss_pred HHHHHHHHHh------CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 183 KIRKRIMDFM------NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 183 ~~r~~ia~~l------ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++|+.|++++ +++++ .|++|+|+++|+.+++.++ .++||+|++....+... ...++..|++++.++.
T Consensus 78 ~lr~aia~~~~~~~g~~~~~~--~I~it~G~~~al~~~~~~l-~~~gd~v~v~~P~y~~~----~~~~~~~g~~~~~~~~ 150 (409)
T PLN00143 78 PARRAIADYLSNDLPYQLSPD--DVYLTLGCKHAAEIIIKVL-ARPEANILLPRPGFPDV----ETYAIFHHLEIRHFDL 150 (409)
T ss_pred HHHHHHHHHHHhhcCCCCCHh--hEEEecChHHHHHHHHHHH-cCCCCEEEEcCCCCcCH----HHHHHHcCCEEEEEec
Confidence 5777777776 34554 4999999999999999999 89999977655443312 3455678999999987
Q ss_pred cC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC----CCCC
Q 037063 257 AW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG----SKDM 327 (588)
Q Consensus 257 ~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~----~~d~ 327 (588)
+. .+..+|.++|++++. ++++++++++++||||..++.++ | ++|+++++++|+|.+..- +...
T Consensus 151 ~~~~~~~~d~~~l~~~~~--------~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~ 222 (409)
T PLN00143 151 LPEKGWEVDLDAVEAIAD--------ENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPF 222 (409)
T ss_pred cCCCCCcCCHHHHHHhcc--------cCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCC
Confidence 42 345689999998887 67899999999999999999665 4 778999999999998321 1101
Q ss_pred CCCC-CCCCCCcEEEeccCccCCCCCCceEEEEEe-C-cchhcc---cCCCCCCCceEeeecCCCccccccccccccccc
Q 037063 328 DTLG-LSLFKPDFLICSFYKIFGENPSGFGCLFVK-K-SSASVL---SGSTSSVSTIMGIEPSFSEIIELETLDESSQSK 401 (588)
Q Consensus 328 ~~l~-l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~-~-~~~~~l---~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e 401 (588)
.++. +.....-+++.|+.|.|+.+..++|++++. + .+++.+ ....... .. .
T Consensus 223 ~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~-~~----------------------~ 279 (409)
T PLN00143 223 VPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKAL-NP----------------------A 279 (409)
T ss_pred cchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHH-hc----------------------c
Confidence 1111 111112378889999988656779999984 3 232211 0000000 00 0
Q ss_pred CCCCCccchhhHHHHHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE-EEEE
Q 037063 402 FPESSISGVSSKLVECKGLDH-ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS-LAFN 479 (588)
Q Consensus 402 ~GT~~~~~~~~~~al~~aL~~-l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i-v~f~ 479 (588)
.....+.+ .++..+|+. .... +++..++++...+++.+.|.++ +...+.. ...|+. +-+.
T Consensus 280 ~~~~~~~q----~a~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~L~~~---------~~~~~~~----~p~gg~f~w~~ 341 (409)
T PLN00143 280 PFPPTFIQ----AAIPEILEKTTEDF-FSKTINILRAALAFCYDKLKEI---------PCIMCPQ----KAEGAFFALVK 341 (409)
T ss_pred CCCCchHH----HHHHHHHhcChHHH-HHHHHHHHHHHHHHHHHHHhcC---------CCCCCCC----CCCeeEEEEEe
Confidence 00111111 223333321 0111 3555566666667777777664 2221111 123443 3334
Q ss_pred eecC--CCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHH
Q 037063 480 VFDW--NGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYR 557 (588)
Q Consensus 480 ~~~~--~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~ 557 (588)
+... .+..-+.+.+.+++.+.||.+.+|..+. .. +++|++++ .+.++++.
T Consensus 342 l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~------------------------~~--~~iRi~~~--~~~~~l~~ 393 (409)
T PLN00143 342 LNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVG------------------------LK--NWLRITFA--VEQSSLED 393 (409)
T ss_pred cchhhcCCCCCHHHHHHHHHHhCCEEEeCccccC------------------------CC--CeEEEEEc--CCHHHHHH
Confidence 4321 0100123445678889999999884320 02 28999998 36899999
Q ss_pred HHHHHHHhhhh
Q 037063 558 LWAFVSRFLDA 568 (588)
Q Consensus 558 li~~l~~~l~~ 568 (588)
.++.|+++++.
T Consensus 394 al~rl~~~l~~ 404 (409)
T PLN00143 394 GLGRLKSFCGR 404 (409)
T ss_pred HHHHHHHHHHH
Confidence 99999888764
No 211
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.79 E-value=3.2e-17 Score=173.10 Aligned_cols=306 Identities=17% Similarity=0.137 Sum_probs=192.3
Q ss_pred cCCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEE
Q 037063 173 YGSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVS 252 (588)
Q Consensus 173 ~g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~ 252 (588)
|++......+.++++|+++-|+. .++.++++..|+..++.++ +++||+|+.....+......+.....+.|+++.
T Consensus 49 Y~R~gnPt~~~le~~la~Le~g~----~a~~~~SGmaAi~~~l~~l-l~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~ 123 (386)
T PF01053_consen 49 YSRYGNPTVRALEQRLAALEGGE----DALLFSSGMAAISAALLAL-LKPGDHIVASDDLYGGTYRLLEELLPRFGVEVT 123 (386)
T ss_dssp BTTTC-HHHHHHHHHHHHHHT-S----EEEEESSHHHHHHHHHHHH-S-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEE
T ss_pred eeccccccHHHHHHHHHHhhccc----ceeeccchHHHHHHHHHhh-cccCCceEecCCccCcchhhhhhhhcccCcEEE
Confidence 45555677789999999999983 3777899999999999999 899999765444333366666777788999999
Q ss_pred EEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcC-cEEEEeCCCcCCCCCCCC
Q 037063 253 SAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKG-WHVLLDATALGSKDMDTL 330 (588)
Q Consensus 253 ~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g-~~vvvDaa~~~~~d~~~l 330 (588)
+++.. +.++|+++++ ++|++|.+..++||+..+.|++.| ++||++| ++++||.+-..|....++
T Consensus 124 ~~d~~------d~~~l~~~l~--------~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL 189 (386)
T PF01053_consen 124 FVDPT------DLEALEAALR--------PNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQNPL 189 (386)
T ss_dssp EESTT------SHHHHHHHHC--------TTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC-GG
T ss_pred EeCch------hHHHHHhhcc--------ccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeeeccC
Confidence 98763 7899999998 799999999999999999999999 9999999 999999997777555555
Q ss_pred CCCCCCCcEEEeccCccCCCCCCc---eEEEEEeC--cchhcccCCC--CCCCceEeeecCCCcccccccccccccccCC
Q 037063 331 GLSLFKPDFLICSFYKIFGENPSG---FGCLFVKK--SSASVLSGST--SSVSTIMGIEPSFSEIIELETLDESSQSKFP 403 (588)
Q Consensus 331 ~l~~~~~D~vv~S~~K~~G~~P~G---~G~L~v~~--~~~~~l~~~~--~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G 403 (588)
.+ ++|+++.|..|+++ +.| .|+++++. +..++++... .| ..
T Consensus 190 ~~---GaDivv~S~TKyl~--Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G--~~------------------------- 237 (386)
T PF01053_consen 190 EL---GADIVVHSATKYLS--GHSDVMGGAVVVNGSSELYDRLREFRRLLG--AT------------------------- 237 (386)
T ss_dssp GG---T-SEEEEETTTTTT--TSSSE-EEEEEESSHHHHHHHHHHHHHHHT---B-------------------------
T ss_pred cC---CceEEEeecccccc--CCcceeeEEEEECchhhhhhhhcchhhhcC--cc-------------------------
Confidence 53 39999999999887 345 67777766 4444443211 11 11
Q ss_pred CCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCC------------CC
Q 037063 404 ESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKV------------MF 470 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~------------~~ 470 (588)
.+.... ..+..+|+.+ ....++..+.+..+.+.|.+ .|.| +|+-|.- ..
T Consensus 238 -~~p~da---~ll~rgl~Tl-----~~R~~~~~~nA~~lA~~L~~---------hp~V~~V~yPgl~s~p~~~~~~~~~~ 299 (386)
T PF01053_consen 238 -LSPFDA---WLLLRGLRTL-----PLRMERQNENAEALAEFLEE---------HPKVKRVYYPGLPSHPQHELAKRQMS 299 (386)
T ss_dssp ---HHHH---HHHHHHHTTH-----HHHHHHHHHHHHHHHHHHHT---------STTEEEEEETTSTTSTTHHHHHHHCS
T ss_pred -chHHHH---HHHhcCCCcH-----HHHHHHHHHHHHHHHHHHHh---------CCCCCeEEEcccccccceeeeeeccc
Confidence 111000 1223444433 33344444555556666665 2445 4665521 11
Q ss_pred CcccEEEEEeecCCCCCcCHHHHHHHHHhCCcE---eccccc----cCccccc-chHHHHHHHHhhhcCCCCCcCCc--c
Q 037063 471 DRGPSLAFNVFDWNGTRIDPALVQKLADRHNIS---LSCGFL----QNIFFSG-EYEQERVRVLETRSGTNETRSGV--S 540 (588)
Q Consensus 471 ~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~---v~~G~~----c~~~~~~-~~~~~~~~~l~~~~~~~~~~~g~--~ 540 (588)
..|++++|.+.+. .+.+.+++++..+. .+-|.. |.+.... .... ..... ..|+ +
T Consensus 300 g~ggl~sf~l~~~------~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~--~e~~~--------~~Gi~~~ 363 (386)
T PF01053_consen 300 GGGGLLSFELKGG------EEAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLS--PEERA--------EAGISDG 363 (386)
T ss_dssp SCTSEEEEEESSH------HHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSC--HHHHH--------HTTS-TT
T ss_pred ccCceeEEEeccc------hhhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCC--hhhhh--------ccCCCCC
Confidence 3457999999871 24677777776654 222321 1121111 1100 00011 1344 3
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 541 VVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 541 ~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
.||+|+|. ||++.|++-|++.|+
T Consensus 364 liRlSvGl----Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 364 LIRLSVGL----EDPDDLIADLEQALE 386 (386)
T ss_dssp EEEEE--S----S-HHHHHHHHHHHHH
T ss_pred eeEEEecc----CCHHHHHHHHHHhcC
Confidence 99999997 899999998887664
No 212
>PRK08175 aminotransferase; Validated
Probab=99.79 E-value=4.8e-17 Score=174.27 Aligned_cols=304 Identities=13% Similarity=0.056 Sum_probs=190.3
Q ss_pred HHHHHHHHHh----CC--CCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 183 KIRKRIMDFM----NI--SEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 183 ~~r~~ia~~l----ga--~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++|+.|++++ |. +++ ..|++|+|+++++.+++..+ +++||+|++....+.... ..++..|++++.++.
T Consensus 71 ~lr~aia~~~~~~~g~~~~~~-~~i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~~v~~ 144 (395)
T PRK08175 71 RLRRAISRWYQDRYDVDIDPE-SEAIVTIGSKEGLAHLMLAT-LDHGDTVLVPNPSYPIHI----YGAVIAGAQVRSVPL 144 (395)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CcEEEccCcHHHHHHHHHHh-CCCCCEEEEcCCCCcchH----HHHHHcCCeEEEEec
Confidence 5556666554 44 333 14999999999999999998 899999776544332122 223567999999998
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCCCcC----CCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDATALG----SKDMD 328 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa~~~----~~d~~ 328 (588)
+. ++ ...++++++++. ..++++++++++++||||..++.+ +| ++|+++|+++|+|.+..- +....
T Consensus 145 ~~-~~-~~~~~l~~~l~~-----~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~ 217 (395)
T PRK08175 145 VE-GV-DFFNELERAIRE-----SYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAP 217 (395)
T ss_pred cc-CC-CcHHHHHHHHhh-----ccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCc
Confidence 73 22 347888887761 124789999999999999999995 46 889999999999998321 11011
Q ss_pred CC-CCCC-CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 329 TL-GLSL-FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 329 ~l-~l~~-~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
.+ .+.. ....+++.|+.|.||.+..++|+++.++++++.+...... + ..++..
T Consensus 218 ~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~~~~------------------------~-~~~~~~ 272 (395)
T PRK08175 218 SIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSY------------------------H-DYGTFT 272 (395)
T ss_pred chhcCCCcccCEEEEeeccccccCcchhheeeeCCHHHHHHHHHHHhh------------------------c-ccCCCc
Confidence 11 1111 1134677999999985445689999888877765432210 0 011111
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGT 486 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~ 486 (588)
..+ .+...+|+..... ++.+.++.+..++++.+.|+.+ ++.+..| ..|..+-+.+.+.- .
T Consensus 273 ~~q----~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~L~~~----------~~~~~~p----~~g~~i~i~l~~~~-~ 332 (395)
T PRK08175 273 PLQ----VAAIAALEGDQQC-VRDIAEQYKRRRDVLVKGLHEA----------GWMVEMP----KASMYVWAKIPEPY-A 332 (395)
T ss_pred HHH----HHHHHHHhCcHHH-HHHHHHHHHHHHHHHHHHHHHc----------CCcccCC----CEEEEEEEECCccc-C
Confidence 111 1222334321111 4556666677778888888874 2333332 23455556655310 0
Q ss_pred CcCHHHHH-HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 487 RIDPALVQ-KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 487 ~i~~~~v~-~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
.++...+. +++++.||.|.+|.... . .+...+|+++. .+.+.+...++.|+++
T Consensus 333 ~~~~~~~~~~l~~~~gv~v~p~~~f~----------------~--------~~~~~lRis~~--~~~~~~~~al~~l~~~ 386 (395)
T PRK08175 333 AMGSLEFAKKLLNEAKVCVSPGIGFG----------------D--------YGDTHVRFALI--ENRDRIRQAIRGIKAM 386 (395)
T ss_pred CCCHHHHHHHHHHhCCEEEeCchhhC----------------c--------CCCCeEEEEeC--CCHHHHHHHHHHHHHH
Confidence 12345554 56678999998874321 0 12238999986 4789999999999988
Q ss_pred hhhhh
Q 037063 566 LDADF 570 (588)
Q Consensus 566 l~~~~ 570 (588)
+.+..
T Consensus 387 l~~~~ 391 (395)
T PRK08175 387 FRADG 391 (395)
T ss_pred HHhcC
Confidence 87543
No 213
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=6.4e-17 Score=173.10 Aligned_cols=161 Identities=14% Similarity=0.077 Sum_probs=128.8
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcC-CCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVY-DHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~-e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
...++.+.+.++++.|.. + .+.++|+++|+.+++.++ +++||+|+++. .|.+ ....+....++.|+++.+++.
T Consensus 60 nPtv~~lE~~la~leg~~---~-av~~~SG~aAi~~al~al-l~~GD~VI~~~~~Y~~-T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 60 NPTLAAFEQKLAELEGGV---G-AVATASGQAAIMLAVLNI-CSSGDHLLCSSTVYGG-TFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred CcHHHHHHHHHHHHhCCC---c-EEEECCHHHHHHHHHHHh-cCCCCEEEECCCchHH-HHHHHHHHHHHCCCEEEEECC
Confidence 345678999999999984 2 778999999999999998 89999977554 4443 333334446788999999865
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
.+|+++++++|+ ++|++|++.+++|+++.+.|+++| ++|+++|+++++|++-..|....++. .
T Consensus 134 -----~~d~~~l~~~I~--------~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~~~pl~---~ 197 (432)
T PRK06702 134 -----NLTADEIVALAN--------DKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYLCQAFE---H 197 (432)
T ss_pred -----CCCHHHHHHhCC--------cCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhhCChhh---c
Confidence 268899999998 789999999999999999999999 99999999999999976664344333 2
Q ss_pred CCcEEEeccCccCCCCCCceEEEEE
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFV 360 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v 360 (588)
++|+++.|..|++|.+..++|.+++
T Consensus 198 GADIvv~S~TKy~~Ghsd~l~G~v~ 222 (432)
T PRK06702 198 GANIIVHSTTKYIDGHASSLGGIVI 222 (432)
T ss_pred CCCEEEEccccccCCCcceeceEEE
Confidence 3999999999977633455666665
No 214
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.79 E-value=2.3e-17 Score=172.36 Aligned_cols=271 Identities=14% Similarity=0.091 Sum_probs=179.8
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
.++|+.+++++|+++++ |++|+|+++++.+++.. +.+| +|++ ...|+. + ...++..|.+++.++
T Consensus 50 ~~lr~~la~~~~~~~~~--i~~t~G~~~~i~~~~~~--l~~g-~vl~~~p~y~~--~---~~~~~~~g~~~~~~~----- 114 (330)
T TIGR01140 50 DELRAAAAAYYGLPAAS--VLPVNGAQEAIYLLPRL--LAPG-RVLVLAPTYSE--Y---ARAWRAAGHEVVELP----- 114 (330)
T ss_pred HHHHHHHHHHhCCChhh--EEECCCHHHHHHHHHHH--hCCC-eEEEeCCCcHH--H---HHHHHHcCCEEEEeC-----
Confidence 68999999999997665 99999999999998766 4577 5554 334432 2 345677899998876
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCc--CCC-CCCCCCCC
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATAL--GSK-DMDTLGLS 333 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~--~~~-d~~~l~l~ 333 (588)
|++++++.+. ++++|++++++|+||..+|.++ | ++|+++|++||+|.+.. .+. ++..+ ..
T Consensus 115 ---d~~~l~~~~~---------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~ 181 (330)
T TIGR01140 115 ---DLDRLPAALE---------ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQ-AA 181 (330)
T ss_pred ---CHHHHHhhcc---------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhH-hc
Confidence 5688887774 3678999999999999999665 5 67789999999999953 221 11111 11
Q ss_pred CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhH
Q 037063 334 LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSK 413 (588)
Q Consensus 334 ~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~ 413 (588)
....++++.|++|.||.+..++|+++++++.++.+...... . +.+..
T Consensus 182 ~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~--------------------------~~s~~----- 228 (330)
T TIGR01140 182 RFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREALGP--W--------------------------TVNGP----- 228 (330)
T ss_pred cCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcCCC--C--------------------------CchHH-----
Confidence 22357899999999995335579999998887766543311 0 01111
Q ss_pred HHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHH
Q 037063 414 LVECKGLDHADALG-LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 414 ~al~~aL~~l~~~G-~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~ 492 (588)
+...+.+.++..+ .+.+.++++.+.+++.+.|+++ +.+++.+ ..+..+.+.+.+ ..+
T Consensus 229 -~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~-----~~~~f~~~~~~~-------~~~ 286 (330)
T TIGR01140 229 -ARAAGRAALADTAWQAATRARLAAERARLAALLARL---------GGLEVVG-----GTALFLLVRTPD-------AAA 286 (330)
T ss_pred -HHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhC---------CCceECC-----CCCeEEEEEcCC-------HHH
Confidence 1123333333322 3566788888999999999875 3344432 123333333322 455
Q ss_pred HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHH
Q 037063 493 VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 493 v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l 562 (588)
+.+.|.++||.+.+|.... . .+.++||++++. ..++ ++|+.+|
T Consensus 287 l~~~l~~~gi~v~pg~~f~----------------~--------~~~~~iRi~~~~--~~~~-~~~~~~l 329 (330)
T TIGR01140 287 LHEALARRGILIRDFDNFP----------------G--------LDPRYLRFALPT--DEEN-DRLEEAL 329 (330)
T ss_pred HHHHHHHCCEEEEECCCCC----------------C--------CCCCEEEEEecC--HHHH-HHHHHhh
Confidence 6666667899999885420 0 122389999873 3355 8888765
No 215
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.79 E-value=4.2e-17 Score=174.60 Aligned_cols=298 Identities=13% Similarity=0.052 Sum_probs=185.5
Q ss_pred HHHHHHHHHh----C----CCCCCceEEEecCHHHHHHHHHHhCCCCCCCe--EEEcCCCchhHHHHHHHHHHhcCCEEE
Q 037063 183 KIRKRIMDFM----N----ISEDDYTLVFTANQSSAFKLLAESYPFYSNPR--LLTVYDHENEAAALMIESSKKRGARVS 252 (588)
Q Consensus 183 ~~r~~ia~~l----g----a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~--ll~~~e~~s~~~~~~~~~a~~~G~~v~ 252 (588)
++|+.|++++ | ++++ ..|++|+|+++|+.+++..+ +++||+ |+++...+.. + ...++..|++++
T Consensus 68 ~lr~aia~~~~~~~~~~~~~~~~-~~i~it~Ga~~al~~~~~~l-~~~gd~~~vlv~~P~y~~-~---~~~~~~~g~~~~ 141 (393)
T TIGR03538 68 ELRQAIARWLERRFDLPTGVDPE-RHVLPVNGTREALFAFAQAV-INPGQAPLVVMPNPFYQI-Y---EGAALLAGAEPY 141 (393)
T ss_pred HHHHHHHHHHHHhhCCcccCCCC-ceEEECCCcHHHHHHHHHHH-cCCCCcceEEecCCCCcc-h---HHHHHhcCCeEE
Confidence 6777777776 3 4443 24999999999999999998 899986 6665544331 2 345677899999
Q ss_pred EEeccCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC-CCC
Q 037063 253 SAEFAWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG-SKD 326 (588)
Q Consensus 253 ~v~~~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~-~~d 326 (588)
.++++.. +..+|.+++++++. +++++|+++.++||||..++.++ | ++|+++|++||+|.+-.- -.+
T Consensus 142 ~v~~~~~~~~~~d~~~l~~~~~--------~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~ 213 (393)
T TIGR03538 142 FLNCTAENGFLPDFDAVPESVW--------RRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFD 213 (393)
T ss_pred EeeccccCCCCCCHHHHHHHHh--------hcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccC
Confidence 9998633 24578999998887 57899999999999999999655 5 778999999999998321 100
Q ss_pred ----CC-------CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccc
Q 037063 327 ----MD-------TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLD 395 (588)
Q Consensus 327 ----~~-------~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~ 395 (588)
.. .++.....--+++.|+.|.||.+..++|+++..+++++.+.......
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~~~~~~~~~~-------------------- 273 (393)
T TIGR03538 214 EGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRYRTYH-------------------- 273 (393)
T ss_pred CCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHHHHHHHHHHhh--------------------
Confidence 00 01110111237889999987755567999998887776554322100
Q ss_pred ccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE
Q 037063 396 ESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS 475 (588)
Q Consensus 396 ~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i 475 (588)
..+.+.+.+ .++..++.. ++ -+++..++.++..+++.+.|.++ +.+..| ..|..
T Consensus 274 -----~~~~~~~~q----~~~~~~l~~-~~-~~~~~~~~~~~~~~~~~~~L~~~-----------~~~~~p----~gg~f 327 (393)
T TIGR03538 274 -----GCAMPIPTQ----LASIAAWND-EQ-HVRENRALYREKFAAVLEILGQV-----------LDLELP----DAGFY 327 (393)
T ss_pred -----ccCcCHHHH----HHHHHHhcC-hH-HHHHHHHHHHHHHHHHHHHHHhh-----------CcccCC----CeeEE
Confidence 000111111 121223321 11 14555566666666777777652 112222 12333
Q ss_pred EEEEeecCCCCCcCHHHHH-HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHH
Q 037063 476 LAFNVFDWNGTRIDPALVQ-KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFED 554 (588)
Q Consensus 476 v~f~~~~~~g~~i~~~~v~-~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eD 554 (588)
+-+.++ .+...+. ++++++||.+.+|....... . ....+.++||+|++. +.++
T Consensus 328 ~~~~~~------~~~~~~~~~l~~~~gV~v~pg~~f~~~~-------------~-----~~~~~~~~~Ris~~~--~~~~ 381 (393)
T TIGR03538 328 LWPKVP------GDDEAFARALYEEENVTVLPGRFLAREA-------------E-----GVNPGEGRVRIALVA--PLEE 381 (393)
T ss_pred EEEECC------CCHHHHHHHHHHHCCEEEeCCccccccc-------------c-----CCCCCCCEEEEEecC--CHHH
Confidence 334443 1234444 55678999999886431000 0 001223499999875 6899
Q ss_pred HHHHHHHHHHhh
Q 037063 555 TYRLWAFVSRFL 566 (588)
Q Consensus 555 v~~li~~l~~~l 566 (588)
++..++.|++|+
T Consensus 382 l~~~l~~l~~~~ 393 (393)
T TIGR03538 382 CVEAAERIRSFI 393 (393)
T ss_pred HHHHHHHHHHhC
Confidence 999998888764
No 216
>PRK07049 methionine gamma-lyase; Validated
Probab=99.79 E-value=7.4e-17 Score=173.71 Aligned_cols=173 Identities=13% Similarity=0.102 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
...+++.||++.|.+ + +++++|+++|+.+++.++ +++||+|++....+......+...++..|++++.++..
T Consensus 85 ~~~Le~~lA~leg~~--~--~iv~~sG~~Ai~~~l~al-~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~--- 156 (427)
T PRK07049 85 SEIVEDRLAVYEGAE--S--AALFSSGMSAIATTLLAF-VRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADG--- 156 (427)
T ss_pred HHHHHHHHHHHhCCC--c--EEEEccHHHHHHHHHHHH-hCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCC---
Confidence 358999999999863 3 788888889999999998 89999977665544434433345567789987666521
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH------cCcEEEEeCCCcCCCCCCCCCCC
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE------KGWHVLLDATALGSKDMDTLGLS 333 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~------~g~~vvvDaa~~~~~d~~~l~l~ 333 (588)
.+.+++++.|.+ ....+++++|.+..++||||.++|+++| ++++. ++++|++|.+-..+....++.
T Consensus 157 --~d~~~l~~~l~~---~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~-- 229 (427)
T PRK07049 157 --LSEAAIGAAAEA---AAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLE-- 229 (427)
T ss_pred --CCHHHHHHHHHh---hccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccc--
Confidence 467788877752 1112579999999999999999999999 88887 799999999844443223332
Q ss_pred CCCCcEEEeccCccCC-CCCCceEEEEEeCcchhccc
Q 037063 334 LFKPDFLICSFYKIFG-ENPSGFGCLFVKKSSASVLS 369 (588)
Q Consensus 334 ~~~~D~vv~S~~K~~G-~~P~G~G~L~v~~~~~~~l~ 369 (588)
..+|+++.|+.|.+| .+...+|+++.++++++.+.
T Consensus 230 -~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~ 265 (427)
T PRK07049 230 -HGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVR 265 (427)
T ss_pred -cCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHH
Confidence 348999999999887 22345899888877766554
No 217
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.78 E-value=6.6e-17 Score=171.01 Aligned_cols=289 Identities=10% Similarity=0.055 Sum_probs=184.4
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNL 261 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~ 261 (588)
.++|+.|++++++++++ |++|+|+++++.+++..+ .+|++|++....+. .....++..|++++.++.+..++
T Consensus 60 ~~Lr~aia~~~~v~~~~--I~it~G~~~~i~~~~~~l--~~g~~vlv~~P~y~----~~~~~~~~~g~~~~~v~~~~~~~ 131 (360)
T PRK07392 60 RELRLALAQHHQLPPEW--ILPGNGAAELLTWAGREL--AQLRAVYLITPAFG----DYRRALRAFGATVKELPLPLDQP 131 (360)
T ss_pred HHHHHHHHHHhCcChhh--EEECCCHHHHHHHHHHHh--CCCCeEEEECCCcH----HHHHHHHHcCCeEEEEecccccC
Confidence 48999999999998776 999999999999999886 36788766554433 22456677899999999873222
Q ss_pred c----cCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCc--CCCC-CCC-CC-
Q 037063 262 R----IHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATAL--GSKD-MDT-LG- 331 (588)
Q Consensus 262 ~----i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~--~~~d-~~~-l~- 331 (588)
. .+.+++++.. +++++++++.++||||..++.++| ++++++++ +|+|.+.. .... ..+ +.
T Consensus 132 ~~~~~~~~~~~~~~~---------~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~ 201 (360)
T PRK07392 132 SPGLTLRLQTLPPQL---------TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPC 201 (360)
T ss_pred CcccccCHHHHHHhc---------cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHH
Confidence 1 2344443321 468999999999999999999999 99999986 66699832 1100 001 11
Q ss_pred CCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchh
Q 037063 332 LSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVS 411 (588)
Q Consensus 332 l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~ 411 (588)
+....--+++.|+.|.||++..++|++++.++.++.+...... +. +..+.+
T Consensus 202 ~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~~--~~-------------------------~s~~~q-- 252 (360)
T PRK07392 202 LAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRDP--WP-------------------------VNGLAA-- 252 (360)
T ss_pred hhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCCC--CC-------------------------CCHHHH--
Confidence 1112223788899999986567799999988877665432211 00 111111
Q ss_pred hHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHH
Q 037063 412 SKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPA 491 (588)
Q Consensus 412 ~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~ 491 (588)
.++..+|+.- .. .+.+.++.+..++.+.+.|+++ +++.++. ..+..+.+.+.. +..
T Consensus 253 --~~~~~~l~~~-~~-~~~~~~~~~~~r~~l~~~L~~~---------~~~~~~~-----~~~~fl~~~~~~------~~~ 308 (360)
T PRK07392 253 --AAAIAALADR-DF-QQQTWAWLPPAREALFQGLASL---------PGLTPLP-----SAANFLLVQSQG------SAL 308 (360)
T ss_pred --HHHHHHhccH-HH-HHHHHHHHHHHHHHHHHHHHhC---------CCcEECC-----CCCCEEEEEcCC------CHH
Confidence 2233344321 11 2334455666677788888764 4555532 223444333321 244
Q ss_pred HH-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 492 LV-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 492 ~v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
++ .+++++.||.|+.|..... .+.++||++++ +.++.++|.++|.+++..
T Consensus 309 ~l~~~ll~~~gv~v~pg~~f~~------------------------~~~~~iRi~~~---~~~~~~~l~~al~~~~~~ 359 (360)
T PRK07392 309 QLQEKLLQQHRILIRDCLSFPE------------------------LGDRYFRVAVR---TEAENQRLLEALAAILAN 359 (360)
T ss_pred HHHHHHHhhCCEEEEeCCCCCC------------------------CCCCEEEEEeC---CHHHHHHHHHHHHHHhhc
Confidence 45 4567889999998843210 12239999988 467778888888887653
No 218
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.78 E-value=4.9e-17 Score=178.22 Aligned_cols=305 Identities=13% Similarity=0.109 Sum_probs=187.2
Q ss_pred HHHHHHHHHhC--------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHH-hcCCEEEE
Q 037063 183 KIRKRIMDFMN--------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSK-KRGARVSS 253 (588)
Q Consensus 183 ~~r~~ia~~lg--------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~-~~G~~v~~ 253 (588)
++|+.||++++ +++++ |++|+|+++|+.+++.++ .+|||.|+++..++.... ..++ +.|++++.
T Consensus 98 ~LR~aiA~~l~~~~g~~v~v~pe~--Ivit~Ga~~al~~l~~~l-~~pGD~Vlv~~P~Y~~~~----~~~~~~~G~~vv~ 170 (496)
T PLN02376 98 KFRQAIAHFMGKARGGKVTFDPER--VVMSGGATGANETIMFCL-ADPGDVFLIPSPYYAAFD----RDLRWRTGVEIIP 170 (496)
T ss_pred HHHHHHHHHHHHHhCCCCcCChhh--EEEccchHHHHHHHHHHh-CCCCCEEEECCCCccchH----HHHHhhCCCEEEE
Confidence 56777777664 56655 999999999999999999 899999887766554222 2233 57999999
Q ss_pred EeccC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCcC----C
Q 037063 254 AEFAW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATALG----S 324 (588)
Q Consensus 254 v~~~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~~----~ 324 (588)
++++. .+..++.+++++++... .....++++|++++++||||..+|.+++ ++|+++|++||+|.+... +
T Consensus 171 v~~~~~~~~~~~~~~le~a~~~a--~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~ 248 (496)
T PLN02376 171 VPCSSSDNFKLTVDAADWAYKKA--QESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAG 248 (496)
T ss_pred EeCCCCccCcCCHHHHHHHHHHH--HhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCC
Confidence 99863 34578999998776410 1112578999999999999999998774 678899999999998432 1
Q ss_pred CCCCC---C----CCCCCCCc--EEEeccCccCCCCCCceEEEEEeCcch-hcccCCCCCCCceEeeecCCCcccccccc
Q 037063 325 KDMDT---L----GLSLFKPD--FLICSFYKIFGENPSGFGCLFVKKSSA-SVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 325 ~d~~~---l----~l~~~~~D--~vv~S~~K~~G~~P~G~G~L~v~~~~~-~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
....+ + +.....+| .++.|++|.||.+..++|+++..++.+ +.++..... +.
T Consensus 249 ~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~~--~~---------------- 310 (496)
T PLN02376 249 GDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSF--GL---------------- 310 (496)
T ss_pred CCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhhc--CC----------------
Confidence 11111 1 11111124 346899999986567799999865433 322211100 00
Q ss_pred cccccccCCCCCccchhhHHHHHHHHH---HHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCC
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLD---HADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFD 471 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~---~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~ 471 (588)
.+.+.+ .++...|+ ++++. +.+..++.+...+.+.+.|.+. +++++.+
T Consensus 311 ---------vs~~~Q----~a~~~~L~d~~~~~~~-l~~~r~~l~~r~~~l~~~L~~~----------gi~~~~~----- 361 (496)
T PLN02376 311 ---------VSSQTQ----LMLASMLSDDQFVDNF-LMESSRRLGIRHKVFTTGIKKA----------DIACLTS----- 361 (496)
T ss_pred ---------CCHHHH----HHHHHHhCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHC----------CCcccCC-----
Confidence 111111 12222222 12221 3444556666667777777763 2333322
Q ss_pred cccE-EEEEeecC-CC-CCc-CHHH-HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec
Q 037063 472 RGPS-LAFNVFDW-NG-TRI-DPAL-VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL 546 (588)
Q Consensus 472 rg~i-v~f~~~~~-~g-~~i-~~~~-v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl 546 (588)
.++. +-+.+... .. ... +... ..+++++.||.+.+|..+.. .+.+++|+++
T Consensus 362 ~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~------------------------~~~g~~Ri~f 417 (496)
T PLN02376 362 NAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRC------------------------TEPGWFRICF 417 (496)
T ss_pred CceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCC------------------------CCCCEEEEEe
Confidence 2433 33344321 10 111 1123 34556678999999865420 1123999999
Q ss_pred CCCCCHHHHHHHHHHHHHhhhh
Q 037063 547 GCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 547 g~~~t~eDv~~li~~l~~~l~~ 568 (588)
+.. +.++++..++.|++++.+
T Consensus 418 a~~-~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 418 ANM-DDDTLHVALGRIQDFVSK 438 (496)
T ss_pred eCC-CHHHHHHHHHHHHHHHHH
Confidence 853 468899889888888753
No 219
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.78 E-value=9.2e-17 Score=172.92 Aligned_cols=344 Identities=11% Similarity=0.057 Sum_probs=218.4
Q ss_pred CCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|+|..+ .|.-++.+.+++.+.+.... ..+ ..+ + ..+...+
T Consensus 34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~--------------------~~~-------~--~~~~~~~ 83 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLT-HFS--------------------LGF-------F--YNEPAVE 83 (413)
T ss_pred CCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCc-Ccc--------------------Ccc-------c--CCHHHHH
Confidence 5678899876 44567788888766653210 000 000 0 1466789
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEE-EcCCCchhHHHHHHHHHHh---------cCCEEE
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLL-TVYDHENEAAALMIESSKK---------RGARVS 252 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll-~~~e~~s~~~~~~~~~a~~---------~G~~v~ 252 (588)
+.+.++++++.+.+ .|+|++|+++|+..++..+. +.++++|+ ....||.....+ ...... .+..+.
T Consensus 84 l~~~l~~~~~~~~~--~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (413)
T cd00610 84 LAELLLALTPEGLD--KVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGA-LSLTGSKKYRGGFGPLLPGVL 160 (413)
T ss_pred HHHHHHHhCCCCCC--EEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHH-HHhcCCccccccCCCCCCCcE
Confidence 99999999997544 49999999999999888652 35677755 555677633333 222111 123455
Q ss_pred EEeccCC-----CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCc
Q 037063 253 SAEFAWP-----NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATAL 322 (588)
Q Consensus 253 ~v~~~~~-----~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~ 322 (588)
.+|.+.+ +...++++|++.++. ...++++|++..+++++|...| +++| ++|+++|+++++|.++.
T Consensus 161 ~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~ 235 (413)
T cd00610 161 HVPYPYRYRPPAELADDLEALEEALEE-----HPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT 235 (413)
T ss_pred EeCCCccccchhhHHHHHHHHHHHHhc-----CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 6665411 123377888888871 1136789999999999999998 8889 99999999999999965
Q ss_pred C-CCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcc--cCCCCCCCceEeeecCCCccccccccccc
Q 037063 323 G-SKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVL--SGSTSSVSTIMGIEPSFSEIIELETLDES 397 (588)
Q Consensus 323 ~-~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l--~~~~~g~~g~v~~~~~~~~~~~~~~~~~~ 397 (588)
. +.. ...++.....+|++ ++.|.+|. +.++|+++.++++++.+ .....
T Consensus 236 g~g~~g~~~~~~~~~~~~d~~--t~sK~l~~-g~~~g~~~~~~~~~~~~~~~~~~~------------------------ 288 (413)
T cd00610 236 GFGRTGKMFAFEHFGVEPDIV--TLGKGLGG-GLPLGAVLGREEIMDAFPAGPGLH------------------------ 288 (413)
T ss_pred CCCcCcchhhHhhcCCCCCeE--EEcccccC-ccccEEEEEcHHHHHhhccCCCCC------------------------
Confidence 3 110 00111112247865 45598884 46699999998887765 11110
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE
Q 037063 398 SQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA 477 (588)
Q Consensus 398 ~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~ 477 (588)
.+|.....+ ..++..++|+.+++ +.+.++++.+.+++.+.|+.+... .+.+.-. ...|+++.
T Consensus 289 ----~~t~~~~~~-~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~-----~~~~~~~-----~~~g~~~~ 350 (413)
T cd00610 289 ----GGTFGGNPL-ACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEK-----HPLVGDV-----RGRGLMIG 350 (413)
T ss_pred ----CCCCCcCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhh-----CCcEEEe-----ecCceEEE
Confidence 111111111 12455567777765 467788889999999988875210 0111111 13578888
Q ss_pred EEeecCCCC----CcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHH
Q 037063 478 FNVFDWNGT----RIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFE 553 (588)
Q Consensus 478 f~~~~~~g~----~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~e 553 (588)
+.+.+..+. ......+.+.|.++||.+.++. ...+|+++++.+|.+
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~------------------------------~~~lR~~~~~~~t~~ 400 (413)
T cd00610 351 IELVKDRATKPPDKELAAKIIKAALERGLLLRPSG------------------------------GNVIRLLPPLIITEE 400 (413)
T ss_pred EEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC------------------------------CCEEEEECCCcCCHH
Confidence 887652110 0224556677778899987651 128999999999999
Q ss_pred HHHHHHHHHHHhh
Q 037063 554 DTYRLWAFVSRFL 566 (588)
Q Consensus 554 Dv~~li~~l~~~l 566 (588)
||+++++.|.+.|
T Consensus 401 ~i~~~~~~l~~~l 413 (413)
T cd00610 401 EIDEGLDALDEAL 413 (413)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998754
No 220
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.78 E-value=1.7e-16 Score=170.14 Aligned_cols=289 Identities=13% Similarity=0.097 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCe-EE-EcCCCchhHHHHHHHHHH---------hcCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPR-LL-TVYDHENEAAALMIESSK---------KRGA 249 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~-ll-~~~e~~s~~~~~~~~~a~---------~~G~ 249 (588)
..++.++++++++.+ +...|+|++|+++|+..++... ..+|++ ++ ....||...... ..... ..+.
T Consensus 87 ~~~la~~l~~~~~~~-~~~~v~~~~sgsea~~~al~~~-~~~g~~~ii~~~~~yhg~~~~~-~~~~~~~~~~~~~~~~~~ 163 (398)
T PRK03244 87 QIALAERLVELLGAP-EGGRVFFCNSGAEANEAAFKLA-RLTGRTKIVAAEGGFHGRTMGA-LALTGQPAKRAPFEPLPG 163 (398)
T ss_pred HHHHHHHHHHhCCCC-CCCEEEEeCchHHHHHHHHHHH-HHHCCCeEEEECCCcCCccHHH-HhccCCcccccCCCCCCC
Confidence 358888999998853 1135999999999999998865 335643 54 445666533222 11110 0011
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCcC-
Q 037063 250 RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATALG- 323 (588)
Q Consensus 250 ~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~~- 323 (588)
.+..+|. .|.+++++.+. +++++|++..++|++|.+.| +++| ++|+++|+++|+|.++..
T Consensus 164 ~~~~~~~------~d~~~l~~~~~--------~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~ 229 (398)
T PRK03244 164 GVEHVPY------GDVDALAAAVD--------DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGI 229 (398)
T ss_pred CceEeCC------CCHHHHHHhhc--------CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 2233332 26788888886 67899999999999999998 8889 999999999999999642
Q ss_pred CCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccccccccc
Q 037063 324 SKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSK 401 (588)
Q Consensus 324 ~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e 401 (588)
+.. .-.+......+|++ ++.|.+|. +..+|++++++++++.+.....+ . .|
T Consensus 230 gr~g~~~~~~~~~~~pDi~--t~sK~l~~-G~~ig~~~~~~~~~~~~~~~~~~--~--------------------t~-- 282 (398)
T PRK03244 230 GRTGAWFAHQHDGVTPDVV--TLAKGLGG-GLPIGACLAFGPAADLLTPGLHG--S--------------------TF-- 282 (398)
T ss_pred cccchHHhhhhhCCCCCEE--EEchhhhC-CcccEEEEEcHHHHhhccCCCCc--C--------------------CC--
Confidence 210 01111223348876 55798873 45699999999877665432211 0 01
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEee
Q 037063 402 FPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVF 481 (588)
Q Consensus 402 ~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~ 481 (588)
+ .+... .++..++|+.+.+ +.+.++++++.+++++.|.++.| +.+.-+. .+|.++.+.+.
T Consensus 283 -~-~~~~~---~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~-------~~~~~v~-----g~g~~~~i~~~ 342 (398)
T PRK03244 283 -G-GNPVA---CAAALAVLDTIAS---EGLLENAERLGEQLRAGIEALGH-------PLVDHVR-----GRGLLLGIVLT 342 (398)
T ss_pred -C-CCHHH---HHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhcCC-------CceeeEe-----eccEEEEEEEe
Confidence 0 11111 1333455554443 56788999999999999998733 2221111 24667777664
Q ss_pred cCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHH
Q 037063 482 DWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAF 561 (588)
Q Consensus 482 ~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~ 561 (588)
.. ....+.+.+.++||.++.. +..+||++++...+.+||+++++.
T Consensus 343 ~~-----~~~~~~~~l~~~Gv~~~~~------------------------------~~~~iR~~p~~~~t~~~i~~~~~~ 387 (398)
T PRK03244 343 AP-----VAKAVEAAAREAGFLVNAV------------------------------APDVIRLAPPLIITDAQVDAFVAA 387 (398)
T ss_pred cc-----HHHHHHHHHHHCCeEEeec------------------------------CCCEEEEECCCcCCHHHHHHHHHH
Confidence 31 2456777777889998642 112899999999999999999999
Q ss_pred HHHhhhh
Q 037063 562 VSRFLDA 568 (588)
Q Consensus 562 l~~~l~~ 568 (588)
|.+.++.
T Consensus 388 l~~~l~~ 394 (398)
T PRK03244 388 LPAILDA 394 (398)
T ss_pred HHHHHHh
Confidence 9998754
No 221
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=1.3e-16 Score=167.03 Aligned_cols=270 Identities=15% Similarity=0.171 Sum_probs=181.4
Q ss_pred HHHHHHHHHHhC---CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccC
Q 037063 182 SKIRKRIMDFMN---ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAW 258 (588)
Q Consensus 182 ~~~r~~ia~~lg---a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~ 258 (588)
.++|+.|+++++ +++++ |++|+|+++++.+++.++ ++|++....+ ......++..|++++.++.+
T Consensus 59 ~~Lr~aia~~~~~~~~~~~~--i~it~Ga~~~i~~~~~~~-----d~v~v~~P~y----~~~~~~~~~~g~~~~~v~~~- 126 (335)
T PRK14808 59 EELIEKILSYLDTDFLSKNN--VSVGNGADEIIYVMMLMF-----DRSVFFPPTY----SCYRIFAKAVGAKFLEVPLT- 126 (335)
T ss_pred HHHHHHHHHHhCCCCCCcce--EEEcCCHHHHHHHHHHHh-----CcEEECCCCH----HHHHHHHHHcCCeEEEecCC-
Confidence 589999999998 76665 999999999999999987 5666554433 23356778889999999987
Q ss_pred CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCC--cCCCCCCCCCCCCC
Q 037063 259 PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATA--LGSKDMDTLGLSLF 335 (588)
Q Consensus 259 ~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~--~~~~d~~~l~l~~~ 335 (588)
+++.++... + .+++++++++++||||..++.+++ +++ +++++||+|.+- +.+....++ +...
T Consensus 127 ~~~~~~~~~----~---------~~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~-~~~~ 191 (335)
T PRK14808 127 KDLRIPEVN----V---------GEGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDL-LKKY 191 (335)
T ss_pred CcCCCChhH----c---------cCCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHH-HHhC
Confidence 455443221 2 246899999999999999999999 777 689999999982 222111110 1111
Q ss_pred CCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHH
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLV 415 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~a 415 (588)
.--+++.|+.|.||.+..++|+++.++++++.+....... + ...+.+ .+
T Consensus 192 ~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~~~-~--------------------------~~~~~q----~a 240 (335)
T PRK14808 192 ENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLPF-N--------------------------VSYVSQ----MF 240 (335)
T ss_pred CCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcCCC-C--------------------------CCHHHH----HH
Confidence 2347888999999954566999999988877664332110 0 011111 22
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHH
Q 037063 416 ECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQK 495 (588)
Q Consensus 416 l~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~ 495 (588)
...+++..+. +++..++....++++.+.|.++ +++++.+ .|+++-+.+.+ .+...+.+
T Consensus 241 ~~~~l~~~~~--~~~~~~~~~~~r~~l~~~L~~~----------g~~~~~~-----~g~f~~~~l~~-----~~~~~~~~ 298 (335)
T PRK14808 241 AKVALDHREI--FEERTKFIVEERERMKSALREM----------GYRITDS-----RGNFVFIFMEK-----EEKERLLE 298 (335)
T ss_pred HHHHHhCHHH--HHHHHHHHHHHHHHHHHHHHHC----------CCEECCC-----CCeEEEEeCCC-----ccHHHHHH
Confidence 2344443222 2333444455567777888764 3455432 46666666653 23567888
Q ss_pred HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 496 LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 496 ~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
.|.++||.|+. | . ..||||++ +.++.++++++|++|
T Consensus 299 ~l~~~Gi~V~~---~--------------------------~--~~~Risi~---~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 299 HLRAKNIAVRS---F--------------------------R--EGVRITIG---KREENDMILKELEVF 334 (335)
T ss_pred HHHHCCeEEEE---C--------------------------C--CCeEEecC---CHHHHHHHHHHHHhh
Confidence 88899999983 1 1 17999988 689999999999876
No 222
>PRK09148 aminotransferase; Validated
Probab=99.78 E-value=1e-16 Score=172.33 Aligned_cols=301 Identities=12% Similarity=0.047 Sum_probs=183.7
Q ss_pred HHHHHHHHHh----CC--CCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 183 KIRKRIMDFM----NI--SEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 183 ~~r~~ia~~l----ga--~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++|+.+++++ |. +++ .+|++|+|+++|+.+++.++ +.+||+|++....+... ...++..|++++.++.
T Consensus 72 ~lr~aia~~~~~~~g~~~~~~-~~I~it~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~~----~~~~~~~g~~v~~v~~ 145 (405)
T PRK09148 72 GLRRAQAAYYARRFGVKLNPD-TQVVATLGSKEGFANMAQAI-TAPGDVILCPNPSYPIH----AFGFIMAGGVIRSVPA 145 (405)
T ss_pred HHHHHHHHHHHHHhCCCCCCC-CcEEEcCChHHHHHHHHHHh-cCCCCEEEEcCCCCccc----HHHHHhcCCEEEEEeC
Confidence 5666666665 54 443 14999999999999999999 89999977554433312 2344567999999998
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC----CCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG----SKDMD 328 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~----~~d~~ 328 (588)
+. ++. ..+++++++.. ..+++++++++.++||||..+|.++ | ++|+++|++||+|.+..- +....
T Consensus 146 ~~-~~~-~~~~l~~~~~~-----~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~ 218 (405)
T PRK09148 146 EP-DEE-FFPALERAVRH-----SIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPP 218 (405)
T ss_pred CC-CCC-CccCHHHHHhh-----ccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCC
Confidence 63 221 24556655541 1157899999999999999999865 5 789999999999998321 10011
Q ss_pred CC-CCCC-CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 329 TL-GLSL-FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 329 ~l-~l~~-~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
.+ .+.. ....+++.|++|.+|.+..++|+++.++++++.+....... ..+...
T Consensus 219 s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~~~~-------------------------~~~~~~ 273 (405)
T PRK09148 219 SVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKSYL-------------------------DYGAFT 273 (405)
T ss_pred ChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHHHHHHHHh-------------------------ccCCCh
Confidence 11 1111 11345689999999854456999999888877664322100 001111
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE-EEEEeecCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS-LAFNVFDWNG 485 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i-v~f~~~~~~g 485 (588)
+.+ .++...|+.-+.. ++...++++..++++.+.|.++ ++.+..| .++. +-+.+++.-
T Consensus 274 ~~q----~~~~~~L~~~~~~-~~~~~~~~~~~r~~l~~~L~~~----------~~~~~~p-----~~g~f~~~~l~~~~- 332 (405)
T PRK09148 274 PIQ----VAATAALNGPQDC-IAEMRELYKKRRDVLVESFGRA----------GWDIPPP-----AASMFAWAPIPEAF- 332 (405)
T ss_pred HHH----HHHHHHHhCcHHH-HHHHHHHHHHHHHHHHHHHHHc----------CCccCCC-----CeeEEEEEECCCcc-
Confidence 111 1222333211111 4555666677777888888764 2233222 2343 333443210
Q ss_pred CCcCHHHH-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 486 TRIDPALV-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 486 ~~i~~~~v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
..++...+ ..++++.||.+..|.... . .+.+++||+++ .+.+++...++.|.+
T Consensus 333 ~~~~~~~~~~~ll~~~gV~v~pg~~f~----------------~--------~~~~~~Ri~~~--~~~~~l~~al~~l~~ 386 (405)
T PRK09148 333 RHLGSLEFSKLLVEKADVAVAPGVGFG----------------E--------HGDGYVRIALV--ENEQRIRQAARNIKR 386 (405)
T ss_pred CCCCHHHHHHHHHHhCCEEEeCchhhC----------------C--------CCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 01233444 456678999999884321 0 11238999987 467888888888887
Q ss_pred hhhh
Q 037063 565 FLDA 568 (588)
Q Consensus 565 ~l~~ 568 (588)
+++.
T Consensus 387 ~l~~ 390 (405)
T PRK09148 387 FLSS 390 (405)
T ss_pred HHHH
Confidence 7753
No 223
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.77 E-value=1.2e-16 Score=171.26 Aligned_cols=299 Identities=13% Similarity=0.043 Sum_probs=184.7
Q ss_pred HHHHHHHHHh----CC---CCCCceEEEecCHHHHHHHHHHhCCCCC---CCeEEEcCCCchhHHHHHHHHHHhcCCEEE
Q 037063 183 KIRKRIMDFM----NI---SEDDYTLVFTANQSSAFKLLAESYPFYS---NPRLLTVYDHENEAAALMIESSKKRGARVS 252 (588)
Q Consensus 183 ~~r~~ia~~l----ga---~~~e~~vvft~g~T~al~lv~~s~~~~~---gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~ 252 (588)
++|+.|++++ |. +++ ..|++|+|+++|+.+++.++ .++ ||+|++....+. .....++..|++++
T Consensus 69 ~lr~~ia~~~~~~~g~~~~~~~-~~i~it~G~~~al~~~~~~l-~~~~~~gd~vlv~~P~y~----~~~~~~~~~g~~~~ 142 (396)
T PRK09147 69 ALREAIAAWLERRYGLPALDPA-TQVLPVNGSREALFAFAQTV-IDRDGPGPLVVCPNPFYQ----IYEGAALLAGAEPY 142 (396)
T ss_pred HHHHHHHHHHHHHhCCCcCCcc-ceEEECCChHHHHHHHHHHH-cCCCCCCCEEEEcCCCcc----chHHHHHhcCCEEE
Confidence 4566666554 64 443 25999999999999999999 788 888776655443 12345567899999
Q ss_pred EEeccCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCcCC-CC
Q 037063 253 SAEFAWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATALGS-KD 326 (588)
Q Consensus 253 ~v~~~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~~~-~d 326 (588)
.+|++.+ +..+|++++++.+. +++++++++.++||||..++.+++ ++|++++++||+|.+..-- .+
T Consensus 143 ~vp~~~~~~~~~d~~~l~~~~~--------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~ 214 (396)
T PRK09147 143 FLNCDPANNFAPDFDAVPAEVW--------ARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFD 214 (396)
T ss_pred EeccCccccCccCHHHHHHHHh--------hccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccC
Confidence 9998633 24689999988876 578999999999999999987774 6788999999999983210 00
Q ss_pred -----CC------CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccc
Q 037063 327 -----MD------TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLD 395 (588)
Q Consensus 327 -----~~------~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~ 395 (588)
.. .++.....--+++.|+.|.||.+..++|+++.++++++.+....... +
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~~~~~~~~~-~------------------ 275 (396)
T PRK09147 215 EAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFLLYRTYH-G------------------ 275 (396)
T ss_pred CCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHHHHHHHhhhc-c------------------
Confidence 00 11111111237889999988764567999999888776554321100 0
Q ss_pred ccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE
Q 037063 396 ESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS 475 (588)
Q Consensus 396 ~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i 475 (588)
.+...+.+ .+...++.. .. -+.+..++.++.++.+.+.|.+. +.+..| ..|..
T Consensus 276 ------~~~~~~~q----~a~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~L~~~-----------~~~~~p----~~g~f 328 (396)
T PRK09147 276 ------CAMPPAVQ----AASIAAWND-EA-HVRENRALYREKFDAVTPILAPV-----------LDVQLP----DAGFY 328 (396)
T ss_pred ------cCCCHHHH----HHHHHHhcc-hh-HHHHHHHHHHHHHHHHHHHHHHh-----------cCCCCC----CeeEE
Confidence 00011111 121223321 11 13445555566666666666652 222222 22333
Q ss_pred EEEEeecCCCCCcCHHHH-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHH
Q 037063 476 LAFNVFDWNGTRIDPALV-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFED 554 (588)
Q Consensus 476 v~f~~~~~~g~~i~~~~v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eD 554 (588)
+-+.+. .+...+ .++++++||.+.+|....... . ....+.++||++++. +.++
T Consensus 329 ~~~~~~------~~~~~~~~~ll~~~gv~v~pg~~f~~~~-------------~-----~~~~~~~~iRi~~~~--~~~~ 382 (396)
T PRK09147 329 LWAKVP------GDDTEFARRLYADYNVTVLPGSYLAREA-------------H-----GVNPGAGRVRIALVA--PLAE 382 (396)
T ss_pred EEEECC------CCHHHHHHHHHHhCCEEEeCCccccccc-------------c-----CCCCCCCeEEEEecC--CHHH
Confidence 334443 123444 566678899999885321000 0 001223489999884 5788
Q ss_pred HHHHHHHHHHhhh
Q 037063 555 TYRLWAFVSRFLD 567 (588)
Q Consensus 555 v~~li~~l~~~l~ 567 (588)
++..++.|+++++
T Consensus 383 l~~~l~rl~~~~~ 395 (396)
T PRK09147 383 CVEAAERIVDFCR 395 (396)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999888764
No 224
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.77 E-value=5e-16 Score=166.70 Aligned_cols=291 Identities=10% Similarity=0.053 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--------CCCC-Ce-EEEcCCCchhHHHHHHHHH----
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--------FYSN-PR-LLTVYDHENEAAALMIESS---- 244 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--------~~~g-d~-ll~~~e~~s~~~~~~~~~a---- 244 (588)
+...++.++++++++.+ .++|++++|+|+.+++..+. ..+| ++ |+....||......+ ...
T Consensus 83 ~~~~~l~~~l~~~~~~~----~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~-~~~~~~~ 157 (401)
T PRK00854 83 DQLAPLYEELAALTGSH----KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIV-GFSTDPD 157 (401)
T ss_pred HHHHHHHHHHHhhCCCC----EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHH-hccCCcc
Confidence 45678888999998862 39999999999988887661 1234 45 446666776333221 110
Q ss_pred -----HhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcE
Q 037063 245 -----KKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWH 314 (588)
Q Consensus 245 -----~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~ 314 (588)
......+..++. .|.++|++.|. +++++|++.++.|++|.+.| +++| ++|+++|++
T Consensus 158 ~~~~~~~~~~~~~~~~~------~d~~~le~~i~--------~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~ 223 (401)
T PRK00854 158 ARGGFGPFTPGFRVVPF------GDAEALEAAIT--------PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVT 223 (401)
T ss_pred ccccCCCCCCCeEEeCC------CCHHHHHHHhC--------CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 001123444433 36789999987 68999999999999999998 8889 999999999
Q ss_pred EEEeCCCc-CCCCCCCC--CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccc
Q 037063 315 VLLDATAL-GSKDMDTL--GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIEL 391 (588)
Q Consensus 315 vvvDaa~~-~~~d~~~l--~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~ 391 (588)
+|+|+++. ++..-..+ ......+|+++++ |.++.+-..+|+++.++++++.+.....+ .
T Consensus 224 lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~~~~~~l~~~~~~--~-------------- 285 (401)
T PRK00854 224 LILDEIQTGLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNSEVLGVLKPGQHG--S-------------- 285 (401)
T ss_pred EEEechhhCCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcHHHHhcccCCCCC--C--------------
Confidence 99999976 43211001 1112347988875 97662112378999999887766532211 0
Q ss_pred ccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCC
Q 037063 392 ETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFD 471 (588)
Q Consensus 392 ~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~ 471 (588)
..+..++. .++..++|+.+.+ +.+.++.+.+.+++.+.|.++. .+.+.-. ..
T Consensus 286 ---------t~~~~~~~----~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~-------~~~~~~~-----~g 337 (401)
T PRK00854 286 ---------TFGGNPLA----CAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSIR-------SNIVREV-----RG 337 (401)
T ss_pred ---------CCCcCHHH----HHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhc-------cCceEEE-----ec
Confidence 00111111 2445567776654 3356788888899999998862 1111101 13
Q ss_pred cccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCC
Q 037063 472 RGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTN 551 (588)
Q Consensus 472 rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t 551 (588)
.|.++.+.+.+.. .....+.+.|.++||.++.. +...||+++++.++
T Consensus 338 ~g~~~~i~~~~~~---~~~~~~~~~L~~~GV~v~~~------------------------------~~~~lR~~p~~~~t 384 (401)
T PRK00854 338 RGLMLAVELEPEA---GGARQYCEALKERGLLAKDT------------------------------HDHTIRLAPPLVIT 384 (401)
T ss_pred cceEEEEEEecCc---hhHHHHHHHHHHCCeEEecC------------------------------CCCEEEEeCCcccC
Confidence 4677777664321 23456777777789987531 11289999999999
Q ss_pred HHHHHHHHHHHHHhhh
Q 037063 552 FEDTYRLWAFVSRFLD 567 (588)
Q Consensus 552 ~eDv~~li~~l~~~l~ 567 (588)
.+||+++++.|++++.
T Consensus 385 ~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 385 REQVDWALEQIAKVLA 400 (401)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998763
No 225
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.77 E-value=1.5e-16 Score=173.72 Aligned_cols=307 Identities=14% Similarity=0.095 Sum_probs=193.5
Q ss_pred HHHHHHHHHhC--------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHH-hcCCEEEE
Q 037063 183 KIRKRIMDFMN--------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSK-KRGARVSS 253 (588)
Q Consensus 183 ~~r~~ia~~lg--------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~-~~G~~v~~ 253 (588)
++|+.|+++++ +++++ |++|+|+++++.+++.++ .++||.|++...++..+. ..+. ..|++++.
T Consensus 90 ~LR~aiA~~l~~~~~~~~~v~~~~--Iiit~Ga~~al~~l~~~l-~~pGd~Vlv~~P~Y~~~~----~~~~~~~g~~~v~ 162 (468)
T PLN02450 90 AFKNALAEFMSEIRGNKVTFDPNK--LVLTAGATSANETLMFCL-AEPGDAFLLPTPYYPGFD----RDLKWRTGVEIVP 162 (468)
T ss_pred HHHHHHHHHHHHhhCCCCCcChHH--eEEccChHHHHHHHHHHh-CCCCCEEEECCCCCCchH----HHHhhcCCcEEEE
Confidence 57777777774 45554 999999999999999999 899999887666554222 2223 47999999
Q ss_pred EeccC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCcC----C
Q 037063 254 AEFAW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATALG----S 324 (588)
Q Consensus 254 v~~~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~~----~ 324 (588)
++.+. .+..++.+++++++.+. .+...+++++++++++||||..+|.+.+ +.|+++|++||+|.+-.. +
T Consensus 163 v~~~~~~~~~~~~~~le~~~~~~--~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~ 240 (468)
T PLN02450 163 IHCSSSNGFQITESALEEAYQQA--QKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDS 240 (468)
T ss_pred EecCCccCCcCCHHHHHHHHHHH--HhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCC
Confidence 99853 34567889999888621 1122478999999999999999998874 678899999999998331 1
Q ss_pred CCCCC-CC---------CCCCCCcEEEeccCccCCCCCCceEEEEEeCcc-hhcccCCCCCCCceEeeecCCCccccccc
Q 037063 325 KDMDT-LG---------LSLFKPDFLICSFYKIFGENPSGFGCLFVKKSS-ASVLSGSTSSVSTIMGIEPSFSEIIELET 393 (588)
Q Consensus 325 ~d~~~-l~---------l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~-~~~l~~~~~g~~g~v~~~~~~~~~~~~~~ 393 (588)
....+ +. .....--+++.|+.|.||.+..++|+++..++. ++.+...... +
T Consensus 241 ~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~~--~---------------- 302 (468)
T PLN02450 241 PGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSF--G---------------- 302 (468)
T ss_pred CCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhhc--C----------------
Confidence 01101 11 011122368889999888656789999997653 3322211100 0
Q ss_pred ccccccccCCCCCccchhhHHHHHHHHHH---HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCC
Q 037063 394 LDESSQSKFPESSISGVSSKLVECKGLDH---ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMF 470 (588)
Q Consensus 394 ~~~~~f~e~GT~~~~~~~~~~al~~aL~~---l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~ 470 (588)
..+.+.+ .++...|+. .+.. ++...+++++..+.+.+.|.++ ++.++.|
T Consensus 303 ---------~~s~~~Q----~a~~~~L~~~~~~~~~-l~~~~~~l~~rr~~l~~~L~~~----------gi~~~~~---- 354 (468)
T PLN02450 303 ---------LVSSQTQ----YLLSALLSDKKFTKNY-LEENQKRLKQRQKKLVSGLEAA----------GIKCLKS---- 354 (468)
T ss_pred ---------CCCHHHH----HHHHHHhCCchhHHHH-HHHHHHHHHHHHHHHHHHHHHc----------CCcccCC----
Confidence 0111111 222333321 1111 3445566666777777888764 2333322
Q ss_pred Cccc-EEEEEeecC-CCCCcC--HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec
Q 037063 471 DRGP-SLAFNVFDW-NGTRID--PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL 546 (588)
Q Consensus 471 ~rg~-iv~f~~~~~-~g~~i~--~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl 546 (588)
.++ .+-+.+... +...+. .+.+.+++++.||.+.+|..+.. .+.+++|+++
T Consensus 355 -~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~------------------------~~~g~~Rl~f 409 (468)
T PLN02450 355 -NAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHC------------------------TEPGWFRVCF 409 (468)
T ss_pred -CceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCC------------------------CCCCEEEEEe
Confidence 344 333444321 111111 12355667889999999865421 1123999998
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhhh
Q 037063 547 GCLTNFEDTYRLWAFVSRFLDADF 570 (588)
Q Consensus 547 g~~~t~eDv~~li~~l~~~l~~~~ 570 (588)
+. .+.++++..++.|++++...-
T Consensus 410 ~~-~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 410 AN-MSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred cC-CCHHHHHHHHHHHHHHHHhcc
Confidence 86 357999999999999887765
No 226
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.77 E-value=3.5e-16 Score=170.05 Aligned_cols=305 Identities=16% Similarity=0.093 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccC
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAW 258 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~ 258 (588)
++.+.+.++++.-.|+..+..+|++|+|+++|+.+++..+ ++|||.|++....+ ..+....+..|+++..||+|
T Consensus 136 ~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l-~~pGd~v~vE~PtY----~~~~~~~~~~g~~~~~vp~d- 209 (459)
T COG1167 136 ELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLL-LDPGDTVLVEDPTY----PGALQALEALGARVIPVPVD- 209 (459)
T ss_pred HHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHh-CCCCCEEEEcCCCc----HHHHHHHHHcCCcEEecCCC-
Confidence 4444444444434455444346999999999999999999 89999987654432 23466778899999999997
Q ss_pred CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC------C-CCC
Q 037063 259 PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG------S-KDM 327 (588)
Q Consensus 259 ~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~------~-~d~ 327 (588)
.+ .+++|+|++.+.+. +..-++++|..+||||..++++. | ++|+++++++|.|..-.- | ..+
T Consensus 210 ~~-G~~~e~le~~~~~~------~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l 282 (459)
T COG1167 210 ED-GIDPEALEEALAQW------KPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPL 282 (459)
T ss_pred CC-CCCHHHHHHHHhhc------CCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCCh
Confidence 44 48999999999731 24567888999999999999987 5 899999999999997211 1 111
Q ss_pred CCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCc
Q 037063 328 DTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSI 407 (588)
Q Consensus 328 ~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~ 407 (588)
..++ ...--+++.||+|.+.. ..++|++++.+++++.+....... ..+++.+
T Consensus 283 ~~ld--~~~rViy~gSFSK~l~P-glRlG~vv~p~~~~~~~~~~k~~~-------------------------~~~~s~~ 334 (459)
T COG1167 283 KALD--APGRVIYLGSFSKTLAP-GLRLGYVVAPPELIEKLLRLKQAA-------------------------DLGPSSL 334 (459)
T ss_pred HhhC--CCCCEEEEeeehhhccc-ccceeeeeCCHHHHHHHHHHHHHh-------------------------cCCCChH
Confidence 2222 22345899999998873 578999999998877665432110 1112222
Q ss_pred cchhhHHHHHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeec
Q 037063 408 SGVSSKLVECKGLDHADALG-----LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFD 482 (588)
Q Consensus 408 ~~~~~~~al~~aL~~l~~~G-----~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~ 482 (588)
.+. ....++. .| +.++.+..+.-.+.+.+.|.+. .-+.+++..|. .|-.+-+.+++
T Consensus 335 ~Q~-------~la~~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~-------~~~~~~~~~p~----gG~flwl~l~~ 395 (459)
T COG1167 335 SQA-------ALAAFLL-SGHYDRHLRRLRREYARRRDALLEALAEY-------LPELATWTRPE----GGLFLWLELPE 395 (459)
T ss_pred HHH-------HHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCeeeecCC----ceEEEEEEcCC
Confidence 221 1112232 22 3445555556667777777764 11256665542 23344445544
Q ss_pred CCCCCcCHHHHHHHHHhCCcEecc-ccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHH
Q 037063 483 WNGTRIDPALVQKLADRHNISLSC-GFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAF 561 (588)
Q Consensus 483 ~~g~~i~~~~v~~~l~~~gI~v~~-G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~ 561 (588)
. ++...+...+.++||.+.+ |...... ......+|++++..+ .|++++.+..
T Consensus 396 ~----~~~~~l~~~a~~~gv~i~~~g~~f~~~----------------------~~~~~~~Rl~~s~~~-~e~i~~gi~~ 448 (459)
T COG1167 396 G----IDARELLAAALEKGVVVTPLGSAFSAD----------------------GDPRNGLRLSFSSPS-EEEIEEGIKR 448 (459)
T ss_pred C----CCHHHHHHHHHHCCCEEEcCCccccCC----------------------CCCCCeEEEEcCCCC-HHHHHHHHHH
Confidence 2 6677888888889999887 6443110 012238999998765 7999999999
Q ss_pred HHHhhhhhh
Q 037063 562 VSRFLDADF 570 (588)
Q Consensus 562 l~~~l~~~~ 570 (588)
|.+.+...+
T Consensus 449 l~~~~~~~~ 457 (459)
T COG1167 449 LAALLREAA 457 (459)
T ss_pred HHHHHHHHh
Confidence 888776543
No 227
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.77 E-value=4.5e-17 Score=172.23 Aligned_cols=297 Identities=17% Similarity=0.126 Sum_probs=198.5
Q ss_pred HHHHHHHHHHHhC------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEE
Q 037063 181 ESKIRKRIMDFMN------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSA 254 (588)
Q Consensus 181 ~~~~r~~ia~~lg------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v 254 (588)
..++|+.|+++++ .+++ ..|++++|+.+++.++...+..++|+.|+++...+... .+.++..|++++.+
T Consensus 46 ~~~lr~~ia~~~~~~~~~~~~~~-~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~----~~~~~~~g~~~~~~ 120 (363)
T PF00155_consen 46 YPELREAIADFLGRRYGVPVDPE-ANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSY----IEAARLLGAEVIPV 120 (363)
T ss_dssp HHHHHHHHHHHHHHHHTHHTTGG-EGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHH----HHHHHHTTSEEEEE
T ss_pred hHHHHHHHHHHhhhccCcccccc-eEEEEecccccchhhhhhcccccccccceecCCccccc----cccccccCceeeec
Confidence 4689999999998 6554 24999999999999888876456889877665554422 45667789999999
Q ss_pred eccC-CCCccCHHHHHHHHhhhccccCCC-cceEEEEeCCCCCCCccCCHHHH-HH---HHHcCcEEEEeCCCcCCCCCC
Q 037063 255 EFAW-PNLRIHSGKLMKKIVGKRKKKKKK-KRGLFVFPLQSKVTGARYSYMWM-SV---AAEKGWHVLLDATALGSKDMD 328 (588)
Q Consensus 255 ~~~~-~~~~i~~e~l~~~i~~~~~~~~~~-~t~Lv~~~~~sn~tG~~~pl~~I-~~---a~~~g~~vvvDaa~~~~~d~~ 328 (588)
+++. .++.+|+++|++.+++. ..+. ++++|+++.++||||..+|.+++ ++ |+++|+++++|.+...-..-.
T Consensus 121 ~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~ 197 (363)
T PF00155_consen 121 PLDSENDFHLDPEALEEALDEL---PSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGD 197 (363)
T ss_dssp EEEETTTTEETHHHHHHHHHTS---HTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSS
T ss_pred cccccccccccccccccccccc---cccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCC
Confidence 9752 46779999999999820 1111 57999999999999999999987 55 999999999999955421010
Q ss_pred ------CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccC
Q 037063 329 ------TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKF 402 (588)
Q Consensus 329 ------~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~ 402 (588)
...+......+++.|+.|.||.+..++|++++.+++++.+......+ .
T Consensus 198 ~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~~~~~--------------------------~ 251 (363)
T PF00155_consen 198 PDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIERLRRFQRSG--------------------------L 251 (363)
T ss_dssp SHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHHHHHHHHHHT--------------------------T
T ss_pred CccCcccccccccccceeeeeccccccccccccccccchhhhhhhhhhccccc--------------------------c
Confidence 11112221258889999999953345999999888877665332110 0
Q ss_pred CCCCccchhhHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEe
Q 037063 403 PESSISGVSSKLVECKGLDHADAL--GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNV 480 (588)
Q Consensus 403 GT~~~~~~~~~~al~~aL~~l~~~--G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~ 480 (588)
+ ++..+ .++...+...... -++++.++++..++++.+.|.+. ++.++.+ .++++.+..
T Consensus 252 ~-~~~~~----~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~----------~~~~~~~-----~~~~~~~~~ 311 (363)
T PF00155_consen 252 S-SSPMQ----AAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI----------GITVLPP-----EAGFFLWVR 311 (363)
T ss_dssp S-SHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------TSEEEHH-----SBSSEEEEE
T ss_pred c-cchhh----HHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh----------hhheeec-----cCccEEEEE
Confidence 0 11111 1222333322210 14777888888888999999874 4556553 256666654
Q ss_pred ecCCCCCcCHHHH-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHH
Q 037063 481 FDWNGTRIDPALV-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLW 559 (588)
Q Consensus 481 ~~~~g~~i~~~~v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li 559 (588)
.+. .+...+ ++++++.||.+.+|.... . .++||+++ ...+.|++++++
T Consensus 312 ~~~----~~~~~l~~~L~~~~gi~v~pg~~~~-------------------------~-~~~iRi~~-a~~~~e~~~~~~ 360 (363)
T PF00155_consen 312 LDP----NDAEELAQELLEEYGILVRPGSYFG-------------------------V-PGYIRISL-ASHSEEDLEEAL 360 (363)
T ss_dssp ESH----HHHHHHHHHHHHHHTEEEEEGGGGT-------------------------S-TTEEEEEG-GCSCHHHHHHHH
T ss_pred ccc----chHHHHHHHHHHhCCEEEEecCCCC-------------------------C-CCEEEEEe-ccCCHHHHHHHH
Confidence 431 123344 455555699999884421 1 22899999 667999999999
Q ss_pred HHH
Q 037063 560 AFV 562 (588)
Q Consensus 560 ~~l 562 (588)
+.|
T Consensus 361 ~~l 363 (363)
T PF00155_consen 361 ERL 363 (363)
T ss_dssp HHH
T ss_pred hhC
Confidence 875
No 228
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.76 E-value=2.4e-16 Score=170.92 Aligned_cols=308 Identities=15% Similarity=0.118 Sum_probs=189.1
Q ss_pred HHHHHHHHHHhC--------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEE
Q 037063 182 SKIRKRIMDFMN--------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSS 253 (588)
Q Consensus 182 ~~~r~~ia~~lg--------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~ 253 (588)
.++|+.||++++ ++++ .|++|+|+++|+.+++.++ ..+||.|+++..++..... .+..+.|++++.
T Consensus 98 ~~LR~aiA~~l~~~~~~~~~v~p~--~Ivit~G~t~al~~l~~~l-~~pGD~Vlv~~P~Y~~f~~---~~~~~~g~~vv~ 171 (447)
T PLN02607 98 KSFRQAMASFMEQIRGGKARFDPD--RIVLTAGATAANELLTFIL-ADPGDALLVPTPYYPGFDR---DLRWRTGVKIVP 171 (447)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCHH--HeEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCCcchHH---HHHhcCCcEEEE
Confidence 367777777764 4444 5999999999999999998 7999998876665542322 222357999999
Q ss_pred EeccCCC-CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcCC----
Q 037063 254 AEFAWPN-LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALGS---- 324 (588)
Q Consensus 254 v~~~~~~-~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~~---- 324 (588)
++++..+ ..++.+++++++.+. +....+++++++++++||||..+|.+. | +.|+++|+++|+|.+-...
T Consensus 172 v~~~~~~~f~~~~~~le~a~~~a--~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~ 249 (447)
T PLN02607 172 IHCDSSNNFQVTPQALEAAYQEA--EAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSA 249 (447)
T ss_pred EeCCCCCCCcCCHHHHHHHHHHH--HHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCC
Confidence 9886332 458999999998731 122357899999999999999999665 4 7899999999999984321
Q ss_pred CCCCC-------CCCCC-CCCcEEEeccCccCCCCCCceEEEEEeC-cchhcccCCCCCCCceEeeecCCCccccccccc
Q 037063 325 KDMDT-------LGLSL-FKPDFLICSFYKIFGENPSGFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLD 395 (588)
Q Consensus 325 ~d~~~-------l~l~~-~~~D~vv~S~~K~~G~~P~G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~ 395 (588)
.+..+ ++... ..--.++.|+.|.||.+..++|+++..+ +++..+...... .
T Consensus 250 ~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~~--~------------------ 309 (447)
T PLN02607 250 SEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF--T------------------ 309 (447)
T ss_pred CCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhhc--C------------------
Confidence 00111 11000 0112567899999986567799999843 443433221100 0
Q ss_pred ccccccCCCCCccchhhHHHHHHHHH---HHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCc
Q 037063 396 ESSQSKFPESSISGVSSKLVECKGLD---HADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDR 472 (588)
Q Consensus 396 ~~~f~e~GT~~~~~~~~~~al~~aL~---~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~r 472 (588)
+.+++.+ .++...|+ +.++. +....++++...+.+.+.|+++ |+ .++.+ ..
T Consensus 310 -------~~s~~~q----~~~~~~L~d~~~~~~~-l~~~r~~l~~~~~~~~~~L~~~-------gi---~~~~~----~a 363 (447)
T PLN02607 310 -------LVSSQTQ----HLLASMLSDEEFTENY-IRTNRERLRKRYEMIVQGLRRA-------GI---ECLKG----NA 363 (447)
T ss_pred -------CCCHHHH----HHHHHHhCCchhHHHH-HHHHHHHHHHHHHHHHHHHHhC-------CC---CcccC----Ce
Confidence 0111111 11222222 12221 3455666666667777777764 22 22222 12
Q ss_pred ccEEEEEeecCCCC-CcCH-HH-HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC
Q 037063 473 GPSLAFNVFDWNGT-RIDP-AL-VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL 549 (588)
Q Consensus 473 g~iv~f~~~~~~g~-~i~~-~~-v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~ 549 (588)
|..+-+++...-.. .... .. ..+++++.||.|.+|..|.. ...+++|++++..
T Consensus 364 g~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~------------------------~~~g~fRi~fa~~ 419 (447)
T PLN02607 364 GLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHC------------------------SEPGWFRVCFANM 419 (447)
T ss_pred eEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCC------------------------CCCCEEEEEeccC
Confidence 33444444321000 0111 23 34677788999999865521 1123999998753
Q ss_pred CCHHHHHHHHHHHHHhhhh
Q 037063 550 TNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 550 ~t~eDv~~li~~l~~~l~~ 568 (588)
+.++++..++.|.+++++
T Consensus 420 -~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 420 -SEDTLEVALKRIHRFMDR 437 (447)
T ss_pred -CHHHHHHHHHHHHHHHHH
Confidence 578999999999888754
No 229
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.76 E-value=5.5e-16 Score=165.83 Aligned_cols=295 Identities=11% Similarity=0.034 Sum_probs=196.8
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhC------------C-CCCCCeEEEcCCCchhHHHHHHHHH
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESY------------P-FYSNPRLLTVYDHENEAAALMIESS 244 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~------------~-~~~gd~ll~~~e~~s~~~~~~~~~a 244 (588)
..+.+++.+.||+++|.+ ..++|.+|....+-++ .++ + ...++.|+.+...|+.++.++ +++
T Consensus 146 ~~~h~~LE~~LA~f~g~e---~all~sSGy~AN~~~i-~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~-~ls 220 (476)
T PLN02955 146 TTYHRLLESSLADLKKKE---DCLVCPTGFAANMAAM-VAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGV-RLA 220 (476)
T ss_pred hHHHHHHHHHHHHHHCCC---cEEEECChHHHHHHHH-HHHhhccccccccccccCCCCcEEEEeccchHHHHHHH-Hhc
Confidence 567789999999999984 3466666665544433 332 0 123445777777776566664 444
Q ss_pred Hhc-CCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCc
Q 037063 245 KKR-GARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATAL 322 (588)
Q Consensus 245 ~~~-G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~ 322 (588)
+.+ ++++..++.+ |+++|+++|+. .. .+.++|++..+.++.|.+.|+++| ++++++|+.++||.++.
T Consensus 221 ~~~~~a~~~~f~HN------D~~~Le~~L~~----~~-~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~ 289 (476)
T PLN02955 221 ERQGNVEVFVYRHC------DMYHLNSLLSS----CK-MKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHG 289 (476)
T ss_pred cccCCceEEEeCCC------CHHHHHHHHHh----CC-CCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEccccc
Confidence 444 5777777654 78999999972 11 345799999999999999999999 99999999999999987
Q ss_pred CCCC-------CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccc
Q 037063 323 GSKD-------MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLD 395 (588)
Q Consensus 323 ~~~d-------~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~ 395 (588)
.+.- ...+++. ..+|++++++.|.||. . .|++..+++.++.++..... .
T Consensus 290 ~Gv~G~~G~G~~e~~g~~-~di~ii~~TLsKA~G~--~-GGfi~gs~~~~~~l~~~~~~---~----------------- 345 (476)
T PLN02955 290 TFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAAGC--H-GGFIACSKKWKQLIQSRGRS---F----------------- 345 (476)
T ss_pred CceecCCCCcHHHHhCCC-CCCcEEEEeCccchhc--c-CceeecHHHHHHHHHHhCCC---C-----------------
Confidence 6420 1223332 3489999999999983 2 47888888777766532211 0
Q ss_pred ccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE
Q 037063 396 ESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS 475 (588)
Q Consensus 396 ~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i 475 (588)
.| +|...+.. .++..++++.+.+. +...+++..+.+++++. + |.+ ..++|
T Consensus 346 --if---Stalpp~~--aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~---~-------G~~-----------~~sPI 395 (476)
T PLN02955 346 --IF---STAIPVPM--AAAAYAAVVVARKE--KWRRKAIWERVKEFKAL---S-------GVD-----------ISSPI 395 (476)
T ss_pred --ee---cccccHHH--HHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHh---c-------CCC-----------CCCCE
Confidence 12 11111111 24555777777542 34566677777777662 1 222 12688
Q ss_pred EEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHH
Q 037063 476 LAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDT 555 (588)
Q Consensus 476 v~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv 555 (588)
+.+.+.+.. ....+.+.|.++||.+..... |. . ..|...+|+++...+|.|||
T Consensus 396 ~pI~ig~~~----~a~~~~~~L~~~Gi~v~~i~y--Pt-------------V--------P~g~~rLRi~lsA~Ht~edI 448 (476)
T PLN02955 396 ISLVVGNQE----KALKASRYLLKSGFHVMAIRP--PT-------------V--------PPNSCRLRVTLSAAHTTEDV 448 (476)
T ss_pred EEEEeCCHH----HHHHHHHHHHHCCCEEEEECC--CC-------------C--------CCCCceEEEeeCCCCCHHHH
Confidence 888876531 234467788888999865321 10 0 13344899999999999999
Q ss_pred HHHHHHHHHhhhhh
Q 037063 556 YRLWAFVSRFLDAD 569 (588)
Q Consensus 556 ~~li~~l~~~l~~~ 569 (588)
+++++.|.+..|..
T Consensus 449 d~lv~~L~~~~~~~ 462 (476)
T PLN02955 449 KKLITALSSCLDFD 462 (476)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999886653
No 230
>PRK10534 L-threonine aldolase; Provisional
Probab=99.76 E-value=8.2e-17 Score=168.38 Aligned_cols=289 Identities=12% Similarity=0.069 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhc-CCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKR-GARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~-G~~v~~v~~~ 257 (588)
....++++.|++++|+++ ++++.|+++++.+++.++ +.+||+|++....|...+.. ..+... +++++.++++
T Consensus 34 ~~~~~L~~~la~~~g~~~----~~v~~~g~~a~~~~l~~~-~~~gd~vi~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 106 (333)
T PRK10534 34 PTVNALQDYAAELSGKEA----ALFLPTGTQANLVALLSH-CERGEEYIVGQAAHNYLYEA--GGAAVLGSIQPQPIDAA 106 (333)
T ss_pred HHHHHHHHHHHHHhCCCe----EEEeCchHHHHHHHHHHh-cCCCCeeEEechhhhhHhcC--CchHHhcCceEEeecCC
Confidence 456799999999999852 568888888877777777 78999977654433212211 101222 4677888776
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCcCC-C---CCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATALGS-K---DMDT 329 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~~~-~---d~~~ 329 (588)
.++.+|+++|+++++.. .....++++|+++++ +||..+|.++| ++|+++|++|++|++.... . ....
T Consensus 107 -~~~~~d~~~l~~~i~~~--~~~~~~~~lv~l~np--~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~ 181 (333)
T PRK10534 107 -ADGTLPLDKVAAKIKPD--DIHFARTRLLSLENT--HNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCEL 181 (333)
T ss_pred -CCCCCCHHHHHHhhccc--CcCcccceEEEEecC--CCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCH
Confidence 67789999999988610 000116889999854 46999999886 4688899999999974321 0 0010
Q ss_pred CCCCCCCCcEEEeccCccCCCCCCceE-EEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc
Q 037063 330 LGLSLFKPDFLICSFYKIFGENPSGFG-CLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS 408 (588)
Q Consensus 330 l~l~~~~~D~vv~S~~K~~G~~P~G~G-~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~ 408 (588)
..+. ...|.++.|++|.+|. + +| +++..+++++.+......+ .+..+..
T Consensus 182 ~~~~-~~~~~~~~s~SK~~~~-~--~G~~~~~~~~~i~~~~~~~~~~--------------------------~~~~~~~ 231 (333)
T PRK10534 182 KEIT-QYCDSFTICLSKGLGT-P--VGSLLVGNRDYIKRARRWRKMT--------------------------GGGMRQA 231 (333)
T ss_pred HHHH-hcCCEEEEEeEcCCCC-c--ccceEEcCHHHHHHHHHHHHHh--------------------------CCchhhH
Confidence 0111 1247677799999885 4 56 5767788777664322100 0000111
Q ss_pred chhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCc
Q 037063 409 GVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i 488 (588)
+. +...++..++.. .+.+ ++....++++.+.|.++ +++++.| .++++.+.+.+ .
T Consensus 232 ~~----~~a~~~~~l~~~-~~~~-~~~~~~r~~l~~~L~~~----------g~~~~~~-----~~nfv~~~~~~-----~ 285 (333)
T PRK10534 232 GI----LAAAGLYALKHN-VARL-QEDHDNAAWLAEQLREA----------GADVMRQ-----DTNMLFVRVGE-----E 285 (333)
T ss_pred HH----HHHHHHHHHHhh-HHHH-HHHHHHHHHHHHHHHhC----------CCccCCC-----CceEEEEECCc-----h
Confidence 11 111233323221 1222 23444678899999885 3444432 35666666542 1
Q ss_pred CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 489 DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 489 ~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
+...+.++|.++||.++.| . .+|++.++-.|.|+++++++.|++|+.
T Consensus 286 ~~~~~~~~l~~~gi~v~~~-----------------------------~---~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 286 QAAALGEYMRERNVLINAS-----------------------------P---IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred hHHHHHHHHHHcCeeecCC-----------------------------c---eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 3567788999999998754 1 467777666689999999999998764
No 231
>PRK07505 hypothetical protein; Provisional
Probab=99.76 E-value=7.7e-16 Score=165.35 Aligned_cols=338 Identities=10% Similarity=0.067 Sum_probs=194.1
Q ss_pred CCeeeecCCCCCCC----CHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHH
Q 037063 110 NNYVCFDYIGHGLF----SYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIR 185 (588)
Q Consensus 110 ~~~vyLD~a~~gl~----~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r 185 (588)
++..|||.++.+.+ .+.+++++.+.+.. +++.++. .+.. ....+..++++
T Consensus 44 ~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~--~g~~~~~---------------------~~~~---~~~~~~~~~l~ 97 (402)
T PRK07505 44 DGHTFVNFVSCSYLGLDTHPAIIEGAVDALKR--TGSLHLS---------------------SSRT---RVRSQILKDLE 97 (402)
T ss_pred CCceEEEeecCCccCCCCCHHHHHHHHHHHHH--hCCCCCC---------------------ccch---hhhhHHHHHHH
Confidence 67889999887766 67788888766642 2211110 0000 01256788999
Q ss_pred HHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC---CCCCCe-E-EEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 186 KRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP---FYSNPR-L-LTVYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 186 ~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~---~~~gd~-l-l~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
++|+++++. + .+++++| ++|...++.... +.+|+. + +....+|. ++....... +.+.+++.+|..
T Consensus 98 ~~la~~~~~--~--~~~~~sG-~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~-s~~~~~~~~-~~~~~v~~~~~~--- 167 (402)
T PRK07505 98 EALSELFGA--S--VLTFTSC-SAAHLGILPLLASGHLTGGVPPHMVFDKNAHA-SLNILKGIC-ADETEVETIDHN--- 167 (402)
T ss_pred HHHHHHhCC--C--EEEECCh-HHHHHHHHHHHHhcccCCCCCCEEEEchhhhH-hHHhhhhhh-hcCCeEEEeCCC---
Confidence 999999987 2 2556655 555554443210 233443 4 44444444 322212222 246777777653
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcC---C-C----CCCCCC
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALG---S-K----DMDTLG 331 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~---~-~----d~~~l~ 331 (588)
|.++++++++ ++++++++..+.|++|.+.|+++| ++|+++|+++|+|+++.. + . ....++
T Consensus 168 ---d~~~l~~~~~--------~~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~ 236 (402)
T PRK07505 168 ---DLDALEDICK--------TNKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELD 236 (402)
T ss_pred ---CHHHHHHHHh--------cCCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcC
Confidence 7889999887 567888899999999999999999 999999999999999743 1 0 011222
Q ss_pred CCCCCCcEEEeccCccCCCCCCceEEEEE-eCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 332 LSLFKPDFLICSFYKIFGENPSGFGCLFV-KKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 332 l~~~~~D~vv~S~~K~~G~~P~G~G~L~v-~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
.......+++.|+.|.+|. .| |++++ +++.++.+.....+ . . -.|+++..+.
T Consensus 237 ~~~~d~~i~~~s~sK~~~~--~G-g~~~~~~~~~~~~~~~~~~~--~--------------------t--~~~~~~~~a~ 289 (402)
T PRK07505 237 YRLNERTIIAASLGKAFGA--SG-GVIMLGDAEQIELILRYAGP--L--------------------A--FSQSLNVAAL 289 (402)
T ss_pred CCCCCCeEEEEechhhhhc--cC-eEEEeCCHHHHHHHHHhCCC--c--------------------e--eCCCCCHHHH
Confidence 2111234677799998883 34 77665 44555555432111 0 0 1223333332
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCH
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDP 490 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~ 490 (588)
++..++++.+.+..+.+..+++++..+.+...+.. + .. .....+..+.+.+. ...
T Consensus 290 ---aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------~------~~--g~~~~i~~~~~~~~----~~~ 344 (402)
T PRK07505 290 ---GAILASAEIHLSEELDQLQQKLQNNIALFDSLIPT----------E------QS--GSFLPIRLIYIGDE----DTA 344 (402)
T ss_pred ---HHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh----------c------CC--CCCCCEEEEEeCCH----HHH
Confidence 44556666544333333333333333322221111 0 00 01122333333220 124
Q ss_pred HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 491 ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 491 ~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
..+.+.|.++||.++.... +.. ..+..+||++++...|.||++++++.|++++++.
T Consensus 345 ~~~~~~l~~~Gi~v~~~~~--p~~---------------------~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~~ 400 (402)
T PRK07505 345 IKAAKQLLDRGFYTSPVFF--PVV---------------------AKGRAGLRIMFRASHTNDEIKRLCSLLKEILDEG 400 (402)
T ss_pred HHHHHHHHHCCCeEeeecC--CCC---------------------CCCCceEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 5566767788999986411 000 0122389999999999999999999999987653
No 232
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.76 E-value=4.7e-16 Score=168.67 Aligned_cols=316 Identities=13% Similarity=0.042 Sum_probs=196.3
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCC-
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWP- 259 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~- 259 (588)
+.++|+.|+++++.+ . |++|.|+|+|+.+++.++ +++|| |+....|+.+.... .+..|++++.++++..
T Consensus 80 ~~~Lreaia~~~~~~--~--vv~t~ggt~A~~~~~~al-l~pGD-Vii~~p~~~~~~~~----i~~~G~~~v~v~~~~~~ 149 (460)
T PRK13238 80 YYRLEDAVKDIFGYP--Y--TIPTHQGRAAEQILFPVL-IKKGD-VVPSNYHFDTTRAH----IELNGATAVDLVIDEAL 149 (460)
T ss_pred HHHHHHHHHHHhCCC--c--EEECCCHHHHHHHHHHHh-CCCCC-EEccCCcccchHHH----HHHcCCEEEEEeccccc
Confidence 458999999999973 2 999999999999999999 99999 77666665533332 3457999999998521
Q ss_pred --------CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCC-ccCCHH---HH-HHHHHcCcEEEEeCCCcCC--
Q 037063 260 --------NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTG-ARYSYM---WM-SVAAEKGWHVLLDATALGS-- 324 (588)
Q Consensus 260 --------~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG-~~~pl~---~I-~~a~~~g~~vvvDaa~~~~-- 324 (588)
.+.+|.++|++.|+. ...+++++|++++++|++| ..++.+ +| ++|+++|++||+|+++...
T Consensus 150 ~~~~~~~f~g~id~e~Le~~i~~----~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a 225 (460)
T PRK13238 150 DTGSRHPFKGNFDLEKLEALIEE----VGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENA 225 (460)
T ss_pred cccccccccCCcCHHHHHHHHhh----cCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhh
Confidence 245999999999972 1124799999999999998 888765 57 8899999999999987541
Q ss_pred --CC-----CCCCCCC------CCCCcEEEeccCccCCCCCCceEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccc
Q 037063 325 --KD-----MDTLGLS------LFKPDFLICSFYKIFGENPSGFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIE 390 (588)
Q Consensus 325 --~d-----~~~l~l~------~~~~D~vv~S~~K~~G~~P~G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~ 390 (588)
.. .....+. ..-.|++++|++|.+.. |.| |+++.++ +++++++......-|.+
T Consensus 226 ~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~-~~G-G~i~~~d~~l~~~~~~~~~~~~g~~----------- 292 (460)
T PRK13238 226 YFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMV-NIG-GLLCFRDEDLFTECRTLCILYEGFP----------- 292 (460)
T ss_pred hhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCC-cce-eEEEcChHHHHHHhhhcccccCCcc-----------
Confidence 00 0111110 01279999999995442 776 8888884 66666654431100100
Q ss_pred cccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCC
Q 037063 391 LETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMF 470 (588)
Q Consensus 391 ~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~ 470 (588)
..|..+... .+|+..+|+.... .+.+..+.+ -+++|.+.|.+. | +.+..|
T Consensus 293 ----------t~~g~~~~~---~~Ala~~l~e~~~--~~~~~~~~~-~~~~l~~~L~~~-------G---~~~~~p---- 342 (460)
T PRK13238 293 ----------TYGGLAGRD---MEALAVGLYEGMD--EDYLAYRIG-QVEYLGEGLEEA-------G---VPIQTP---- 342 (460)
T ss_pred ----------cccCcHHHH---HHHHHhhHHHhhC--hHHHHHHHH-HHHHHHHHHHHC-------C---CCeEcc----
Confidence 111111111 1455555543212 123333333 357888888874 3 445554
Q ss_pred CcccEEEEEeecC----CCCCc-CHHHHHHHHHhCCcEecccc-ccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEE
Q 037063 471 DRGPSLAFNVFDW----NGTRI-DPALVQKLADRHNISLSCGF-LQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTA 544 (588)
Q Consensus 471 ~rg~iv~f~~~~~----~g~~i-~~~~v~~~l~~~gI~v~~G~-~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRv 544 (588)
..|..+-.++... .++.. +.....+++.+.||.+-.+. ++.+.-... . .........||+
T Consensus 343 ~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~---------~-----~~~~~~~~~~Rl 408 (460)
T PRK13238 343 AGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKT---------G-----EQLPAPAELLRL 408 (460)
T ss_pred CCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCC---------c-----cccCCccceEEE
Confidence 2233333344321 11112 34456788899999876542 332110000 0 000011348999
Q ss_pred ecCC-CCCHHHHHHHHHHHHHhhh
Q 037063 545 ALGC-LTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 545 Slg~-~~t~eDv~~li~~l~~~l~ 567 (588)
++.- .-|.++++.+++.|+++.+
T Consensus 409 a~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 409 AIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred ecccccCCHHHHHHHHHHHHHHHH
Confidence 9862 2288999999999998763
No 233
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.75 E-value=1.2e-15 Score=154.26 Aligned_cols=333 Identities=15% Similarity=0.124 Sum_probs=227.5
Q ss_pred CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHhCCCCCCceE
Q 037063 122 LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFMNISEDDYTL 201 (588)
Q Consensus 122 l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~lga~~~e~~v 201 (588)
+.|+.+++++.+.+....+|-| ....++.+.+.....+-.+....+..|
T Consensus 38 ~~pp~i~~Al~~rvdhGvfGY~-------------------------------~~~~~~~~ai~~w~~~r~~~~i~~e~i 86 (388)
T COG1168 38 PTPPEIIEALRERVDHGVFGYP-------------------------------YGSDELYAAIAHWFKQRHQWEIKPEWI 86 (388)
T ss_pred CCCHHHHHHHHHHHhcCCCCCC-------------------------------CCCHHHHHHHHHHHHHhcCCCCCcceE
Confidence 3467888888777755555443 112568889999999988876666679
Q ss_pred EEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCc--cCHHHHHHHHhhhcccc
Q 037063 202 VFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLR--IHSGKLMKKIVGKRKKK 279 (588)
Q Consensus 202 vft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~--i~~e~l~~~i~~~~~~~ 279 (588)
+|+++.--++.++++.| -++||.|++..+.+. + +.+..+..|-++...|+..++++ ||.++|++.+..
T Consensus 87 ~~~p~VVpgi~~~I~~~-T~~gd~Vvi~tPvY~---P-F~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~----- 156 (388)
T COG1168 87 VFVPGVVPGISLAIRAL-TKPGDGVVIQTPVYP---P-FYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD----- 156 (388)
T ss_pred EEcCcchHhHHHHHHHh-CcCCCeeEecCCCch---H-HHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc-----
Confidence 99999999999999999 899999775544321 2 24455778999999998755554 699999999983
Q ss_pred CCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC----C-CCCCCCCCCCCC--CcEEEeccCccC
Q 037063 280 KKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG----S-KDMDTLGLSLFK--PDFLICSFYKIF 348 (588)
Q Consensus 280 ~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~----~-~d~~~l~l~~~~--~D~vv~S~~K~~ 348 (588)
.+++++++++++||+|.+..-++ | ++|++||+.||.|..+.= + .......++..- .-+.+.|..|-|
T Consensus 157 --~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtF 234 (388)
T COG1168 157 --ERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTF 234 (388)
T ss_pred --CCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccc
Confidence 56899999999999999999777 4 889999999999998432 2 111111233221 335667889988
Q ss_pred CCCCCceEEEEEeCcch-hc-ccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHh
Q 037063 349 GENPSGFGCLFVKKSSA-SV-LSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL 426 (588)
Q Consensus 349 G~~P~G~G~L~v~~~~~-~~-l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~ 426 (588)
+.+...++.+++.++.. .+ ++..... -.+.+|..++ .|..+|.+.=..+
T Consensus 235 NlaGL~~a~~Ii~n~~lr~~~~~~l~~~--------------------------~~~~~n~lg~---~A~~aAY~~G~~W 285 (388)
T COG1168 235 NLAGLKCAYIIISNRELRAKFLKRLKRN--------------------------GLHGPSALGI---IATEAAYNQGEPW 285 (388)
T ss_pred cchhhhheeEEecCHHHHHHHHHHHHHh--------------------------cCCCCchHHH---HHHHHHHHhchHH
Confidence 86555577778777653 11 1111100 1223455554 3444555443333
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHH-HHHHHhCCcEec
Q 037063 427 GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALV-QKLADRHNISLS 505 (588)
Q Consensus 427 G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v-~~~l~~~gI~v~ 505 (588)
++++.++++...+++.+.|.+. .|++++..|. |.-+.+. |.....++.+.+ ..++++.+|.+.
T Consensus 286 -Ld~L~~yl~~N~~~~~~~l~~~--------~P~v~v~~p~-----gTYL~WL--D~r~l~l~d~~l~~~ll~~akVal~ 349 (388)
T COG1168 286 -LDELLEYLKDNRDYVADFLNKH--------LPGVKVTEPQ-----GTYLAWL--DCRELGLDDSELAEFLLEEAKVALS 349 (388)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhh--------CCCcEEecCC-----Cceeeee--eccccCCChHHHHHHHHHhhcEecc
Confidence 7888999999999999999985 7999998764 3333332 111222554454 557788999998
Q ss_pred cccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 506 CGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 506 ~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.|.-- . ..|.+.+|+-++ .+.+-++..++.|++.++.
T Consensus 350 ~G~~F----------------G--------~~g~gf~RlN~a--cpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 350 PGSTF----------------G--------EEGSGFVRLNFA--CPRAILEEALERLKRALKK 386 (388)
T ss_pred CCCcc----------------C--------cCCCceEEEecC--CCHHHHHHHHHHHHHHHhc
Confidence 88321 1 144559999865 4777788888777766654
No 234
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.75 E-value=1.1e-15 Score=163.71 Aligned_cols=326 Identities=10% Similarity=0.121 Sum_probs=204.6
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+. |--.+.+++++.+.+......+ ... ..+...
T Consensus 37 ~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~----------------------~~~---------~~~~~~ 85 (396)
T PRK04073 37 PEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTS----------------------RAF---------HSDQLG 85 (396)
T ss_pred CCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccc----------------------ccc---------CCHHHH
Confidence 368889998533 4466788888766653211100 000 123445
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--------CCCC-CeEE-EcCCCchhHHHHHHHHHHhcC----
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--------FYSN-PRLL-TVYDHENEAAALMIESSKKRG---- 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--------~~~g-d~ll-~~~e~~s~~~~~~~~~a~~~G---- 248 (588)
++.++++++.+. + .++|++++|+|+..++.... .++| ++|+ +...||...... ..+....+
T Consensus 86 ~l~~~l~~~~~~--~--~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~-~~~~~~~~~~~~ 160 (396)
T PRK04073 86 PWYEKVAKLTGK--D--MVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAA-VSLSSEEEYKRG 160 (396)
T ss_pred HHHHHHHhcCCC--C--eEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHH-HhhcCCcccccC
Confidence 778888888764 2 49999999999887766431 1144 4455 556677633322 22211100
Q ss_pred -----CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEe
Q 037063 249 -----ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLD 318 (588)
Q Consensus 249 -----~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvD 318 (588)
..+..++.. |.+++++.++ +++++|++..++|++|.+.| +++| ++|+++|+++|+|
T Consensus 161 ~~~~~~~~~~~~~~------d~~~l~~~i~--------~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~D 226 (396)
T PRK04073 161 FGPMLPGIKKIPYG------DLEALKAAIT--------PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIAD 226 (396)
T ss_pred CCCCCCCceEeCCC------CHHHHHHhcc--------cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 012233321 6788888887 67899999999999999998 7788 9999999999999
Q ss_pred CCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccc
Q 037063 319 ATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLD 395 (588)
Q Consensus 319 aa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~ 395 (588)
.++. ++.. ....+.....+|+++ +.|.+|.+...+|++++++++++.+.....+ .
T Consensus 227 Ev~~g~g~~g~~~~~~~~~~~pdi~~--~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~--~------------------ 284 (396)
T PRK04073 227 EIQTGLGRTGKLFACDWDNVTPDMYI--LGKALGGGVFPISCVAANRDILGVFTPGSHG--S------------------ 284 (396)
T ss_pred cchhCCCcCcHHHHhhhcCCCCCEEE--ecccccCCCCcceEEEEcHHHHhhhcCCCCC--C------------------
Confidence 9966 3211 111122233488776 4698874224489999999887766432211 0
Q ss_pred ccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE
Q 037063 396 ESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS 475 (588)
Q Consensus 396 ~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i 475 (588)
..+..+ .. .++..++|+.+.+ +.+.++.+.+.+++.+.|.++.+ +.+..+ ..+|.+
T Consensus 285 -----t~~~~~-~~---~aaa~aaL~~~~~---~~l~~~~~~~~~~l~~~L~~l~~-------~~i~~~-----~~~g~~ 340 (396)
T PRK04073 285 -----TFGGNP-LA---CAVSIAALEVLEE---EKLPERSLELGEYFKEQLKEIDN-------PMIKEV-----RGRGLF 340 (396)
T ss_pred -----CCCCCH-HH---HHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhcC-------Ccccce-----ecceEE
Confidence 001111 11 1344467776654 34667888889999999988622 222111 134666
Q ss_pred EEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHH
Q 037063 476 LAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDT 555 (588)
Q Consensus 476 v~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv 555 (588)
+.+.+.. +...+.+.|.++||.+... +..+||+++++..|.|||
T Consensus 341 ~~~~~~~------~~~~~~~~l~~~Gv~~~~~------------------------------~~~~iRi~p~l~~t~e~i 384 (396)
T PRK04073 341 IGVELNE------PARPYCEALKEEGLLCKET------------------------------HETVIRFAPPLVITKEEL 384 (396)
T ss_pred EEEEecc------hHHHHHHHHHHCCeEEecC------------------------------CCCEEEEECCcccCHHHH
Confidence 6666542 2455666677789987531 112899999999999999
Q ss_pred HHHHHHHHHhh
Q 037063 556 YRLWAFVSRFL 566 (588)
Q Consensus 556 ~~li~~l~~~l 566 (588)
+++++.|++++
T Consensus 385 ~~~~~~l~~~l 395 (396)
T PRK04073 385 DWAFEKIKAVL 395 (396)
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 235
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.75 E-value=1.8e-15 Score=151.83 Aligned_cols=166 Identities=11% Similarity=0.066 Sum_probs=136.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+.+.++|+.+=|-- .-+.++++..|+.+++..+ .++||+|++. .-|.. .+..+....++.|++|++++.
T Consensus 61 NPT~~vlE~RiAaLEGG~----aa~a~aSG~AA~~~ai~~l-a~aGD~iVss~~LYGG-T~~lf~~tl~~~Gi~v~fvd~ 134 (426)
T COG2873 61 NPTTDVLEERIAALEGGV----AALAVASGQAAITYAILNL-AGAGDNIVSSSKLYGG-TYNLFSHTLKRLGIEVRFVDP 134 (426)
T ss_pred CchHHHHHHHHHHhhcch----hhhhhccchHHHHHHHHHh-ccCCCeeEeeccccCc-hHHHHHHHHHhcCcEEEEeCC
Confidence 344567889999987652 2677889999999999999 8999998754 44443 666667777999999999986
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ +++.++++|+ ++||+|.+....||-+.+.|++.| ++||++|++++||.+-..|.-+.+++ +
T Consensus 135 ~------d~~~~~~aI~--------~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~---h 197 (426)
T COG2873 135 D------DPENFEAAID--------ENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIE---H 197 (426)
T ss_pred C------CHHHHHHHhC--------cccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcceecchhh---c
Confidence 5 6899999999 899999999999999999999999 99999999999999977764345554 4
Q ss_pred CCcEEEeccCccCCCCCCceEEEEEeCcchh
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFVKKSSAS 366 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~ 366 (588)
++|+++-|..|+.|.....+|.++|.....+
T Consensus 198 GADIVvHS~TK~igGhGt~iGG~iVD~G~FD 228 (426)
T COG2873 198 GADIVVHSATKYIGGHGTAIGGVIVDGGKFD 228 (426)
T ss_pred CCCEEEEeecccccCCccccceEEEeCCccc
Confidence 4999999999988755666888888766544
No 236
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.74 E-value=1.2e-15 Score=159.55 Aligned_cols=272 Identities=14% Similarity=0.107 Sum_probs=177.6
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNL 261 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~ 261 (588)
.++|+.|+++++. ++ |++|+|+++|+.+++. +.+||+|++....+. .....++..|++++.++.+
T Consensus 52 ~~Lr~~ia~~~~~--~~--I~it~Gs~~al~~~~~---~~~gd~v~v~~P~y~----~~~~~~~~~g~~~~~v~~~---- 116 (330)
T PRK05664 52 DGLEAAARAYYGA--PQ--LLPVAGSQAAIQALPR---LRAPGRVGVLSPCYA----EHAHAWRRAGHQVRELDEA---- 116 (330)
T ss_pred HHHHHHHHHHhCC--CC--EEECcCHHHHHHHHHH---ccCCCEEEEcCCChH----HHHHHHHHcCCeEEEechh----
Confidence 5789999999996 33 9999999999999864 468999776655433 2245677889999988753
Q ss_pred ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCcCCCCCCC-CCCCCCC
Q 037063 262 RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATALGSKDMDT-LGLSLFK 336 (588)
Q Consensus 262 ~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~~~~d~~~-l~l~~~~ 336 (588)
++++.++ ++++++++.++||||..++.+++ +.|+++|++||+|.+-.-.....+ ..+....
T Consensus 117 -----~~~~~~~---------~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~ 182 (330)
T PRK05664 117 -----EVEAALD---------SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRP 182 (330)
T ss_pred -----hHhhhhc---------CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCC
Confidence 4555543 56788999999999999998876 456789999999998422110011 1222211
Q ss_pred CcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHH
Q 037063 337 PDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVE 416 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al 416 (588)
--+++.||+|.+|.+..++|+++..+++++.+...... +. ...+.. .+.
T Consensus 183 ~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~--~~-------------------------~~~~~~----~~~ 231 (330)
T PRK05664 183 GLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGP--WT-------------------------VSGPTR----WLA 231 (330)
T ss_pred CEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcCC--CC-------------------------CCHHHH----HHH
Confidence 23788899999986456799999988887766533211 00 000111 223
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHH
Q 037063 417 CKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKL 496 (588)
Q Consensus 417 ~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~ 496 (588)
..+|+.... .+...+++...++++.+.|+++ | ++ +.. .....+-+.+. +...+.+.
T Consensus 232 ~~~L~~~~~--~~~~~~~~~~~r~~l~~~L~~~-------~---~~---~~~--~~~~f~~~~~~-------~~~~~~~~ 287 (330)
T PRK05664 232 QAALADTPW--QRRQRERLLAASQRLAALLRRH-------G---LT---PAG--GCALFQWVRTE-------DAAALHEF 287 (330)
T ss_pred HHHHhChHH--HHHHHHHHHHHHHHHHHHHHHC-------C---Cc---ccC--CcceEEEEecC-------CHHHHHHH
Confidence 344432211 3455666777778888888874 2 21 110 01112222221 35677788
Q ss_pred HHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 497 ADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 497 l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
|.++||.|+. +.. . ++||+|++. +.+|+++|.+.|+++.++
T Consensus 288 l~~~gi~v~~--f~~-------------------------~--~~iRis~~~--~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 288 LARRGILTRL--FEQ-------------------------P--ASLRFGLPA--DEADWARLDQALLAYRKE 328 (330)
T ss_pred HHHCCeEEEE--CCC-------------------------C--CeEEEECCC--CHHHHHHHHHHHHHHHhh
Confidence 8889999963 110 1 289999885 678999999999987553
No 237
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.74 E-value=4.7e-15 Score=169.02 Aligned_cols=324 Identities=14% Similarity=0.051 Sum_probs=196.9
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHH---HHHHhCCCCC----CCeEE-EcCCCchhHHHHHHHHHHhcCC
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFK---LLAESYPFYS----NPRLL-TVYDHENEAAALMIESSKKRGA 249 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~---lv~~s~~~~~----gd~ll-~~~e~~s~~~~~~~~~a~~~G~ 249 (588)
.+++.+..+.++++.|.+. .-++.++++.|-- ++++.+.-.. .++++ ...-|.++ + ..++..|.
T Consensus 529 lq~i~elq~~l~eltGmd~---~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtn--P---asa~~~G~ 600 (939)
T TIGR00461 529 QELIAQLEKWLCSITGFDA---ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTN--P---ASAAMAGM 600 (939)
T ss_pred HHHHHHHHHHHHHHHCCCC---cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcC--H---HHHHHCCC
Confidence 6889999999999999972 1333344443322 2344431111 12344 45556442 2 23566799
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC-HHHH-HHHHHcCcEEEEeCCCcCCC-C
Q 037063 250 RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS-YMWM-SVAAEKGWHVLLDATALGSK-D 326 (588)
Q Consensus 250 ~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p-l~~I-~~a~~~g~~vvvDaa~~~~~-d 326 (588)
+|+.|+.+ ++|.+|+++|++++++ ...++++|++++++| +|.+.| +++| ++||++|..+++|+++..+. -
T Consensus 601 ~Vv~V~~d-~~G~iDle~L~~~i~~-----~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~ 673 (939)
T TIGR00461 601 QVVPVNCD-QDGNIDLVDLKNKAEQ-----HGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVG 673 (939)
T ss_pred EEEEeccC-CCCCcCHHHHHHHHhh-----cCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCC
Confidence 99999998 8899999999999971 124799999999999 799988 9999 99999999999999986641 0
Q ss_pred CCCCCCCCCCCcEEEeccCccCC----CCCCceEEEEEeCcchhcccCCCCCC-CceEeeecCCCccccccccccccccc
Q 037063 327 MDTLGLSLFKPDFLICSFYKIFG----ENPSGFGCLFVKKSSASVLSGSTSSV-STIMGIEPSFSEIIELETLDESSQSK 401 (588)
Q Consensus 327 ~~~l~l~~~~~D~vv~S~~K~~G----~~P~G~G~L~v~~~~~~~l~~~~~g~-~g~v~~~~~~~~~~~~~~~~~~~f~e 401 (588)
+. ....+++|++++|.||.|| .+|.|+|++.+|+.+... ..|+ .+.. .. ...+.. .
T Consensus 674 l~--~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~----lPg~~v~~t--~d-------~~greq----~ 734 (939)
T TIGR00461 674 LT--SPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPF----LPKHDVVSM--IT-------GIGGSK----S 734 (939)
T ss_pred CC--CccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhh----cCCCccccc--cc-------CCCCcc----c
Confidence 11 1123449999999999554 225567999999875433 3332 1110 00 000000 0
Q ss_pred CC-CCC--ccchhhHHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE
Q 037063 402 FP-ESS--ISGVSSKLVECKGLDHADALG---LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS 475 (588)
Q Consensus 402 ~G-T~~--~~~~~~~~al~~aL~~l~~~G---~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i 475 (588)
.| +.+ +-+. ..+..+.-++..+| +.++.+....+++|+.++|++. .++..+......-.-
T Consensus 735 Iga~s~~~~g~a---~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~-----------~~~l~~~~~~~~~hE 800 (939)
T TIGR00461 735 IGSVSAAPYGSA---SILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH-----------YPILFVGTLKHVAHE 800 (939)
T ss_pred cccccccccCcH---HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc-----------CcccccCCCCceeEE
Confidence 11 222 1111 12224444555555 6777888888999999999872 122222110001112
Q ss_pred EEEEeecC-CCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHH
Q 037063 476 LAFNVFDW-NGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFED 554 (588)
Q Consensus 476 v~f~~~~~-~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eD 554 (588)
+.|.+... +...+...++.+.|.++||+-.+- .-| ..|.-.||++ --++.+|
T Consensus 801 fv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~--~~p-----------------------v~g~lmiepT--E~eskee 853 (939)
T TIGR00461 801 CILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTL--SFP-----------------------VPGTLMVEPT--ESESLEE 853 (939)
T ss_pred EEEeccchhhhcCCCHHHHHHHHHhCCeecccc--CCc-----------------------cCCeEEEEee--ccCCHHH
Confidence 33333310 111256788888888899975431 100 0231266666 4789999
Q ss_pred HHHHHHHHHHhhhhh-hcccccc
Q 037063 555 TYRLWAFVSRFLDAD-FVEKERW 576 (588)
Q Consensus 555 v~~li~~l~~~l~~~-~~~~~~~ 576 (588)
||+|++++.++.++- -|+...|
T Consensus 854 lD~f~~al~~I~~e~~~~~~g~~ 876 (939)
T TIGR00461 854 LDRFCDAMIAIKEEINALVAGQP 876 (939)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999998875533 3343344
No 238
>PLN02231 alanine transaminase
Probab=99.74 E-value=1e-15 Score=169.01 Aligned_cols=313 Identities=14% Similarity=0.103 Sum_probs=192.1
Q ss_pred HHHHHHHHHHh----CCCCCCceEEEecCHHHHHHHHHHhCCC-CCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 182 SKIRKRIMDFM----NISEDDYTLVFTANQSSAFKLLAESYPF-YSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 182 ~~~r~~ia~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~-~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++|+.|++++ |.+.+..+|++|+|+++|+.+++..+ . .+||.|++....+..+ ...++..|++++.+++
T Consensus 171 ~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l-~~~~gd~Vli~~P~Y~~y----~~~~~~~g~~~v~~~l 245 (534)
T PLN02231 171 KGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSEKDGILCPIPQYPLY----SASIALHGGTLVPYYL 245 (534)
T ss_pred HHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHh-ccCCCCEEEEeCCCChhH----HHHHHHcCCEEEEEec
Confidence 46777777776 43333345999999999999999998 6 4799987665544322 3345668999999998
Q ss_pred cCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCc-C---C-C-
Q 037063 257 AWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATAL-G---S-K- 325 (588)
Q Consensus 257 ~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~-~---~-~- 325 (588)
+.+ ++.+|.++|+++++.. +....+++++++++++||||..++.+++ ++|+++|++||.|.+-. . + .
T Consensus 246 ~~~~~~~~d~~~Le~~l~~~--~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~ 323 (534)
T PLN02231 246 DEATGWGLEISELKKQLEDA--RSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKK 323 (534)
T ss_pred CcccCCCCCHHHHHHHHHHH--hhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCC
Confidence 733 3579999999999721 1111268999999999999999998774 77899999999999821 1 1 0
Q ss_pred --CCCCC----CCCCCCC-cEEEeccCc-cCCCCCCceEEEEE---eCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 326 --DMDTL----GLSLFKP-DFLICSFYK-IFGENPSGFGCLFV---KKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 326 --d~~~l----~l~~~~~-D~vv~S~~K-~~G~~P~G~G~L~v---~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
.+..+ +...... =+++.|+.| ++|.+..++|++.+ .+++++.+.....-
T Consensus 324 ~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~-------------------- 383 (534)
T PLN02231 324 FHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVASV-------------------- 383 (534)
T ss_pred cccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHhh--------------------
Confidence 01111 1110011 245669999 55754567999987 45565544322100
Q ss_pred cccccccCCCCCccchhhHHHHHHHH----------H-HHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEE
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGL----------D-HADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRI 463 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL----------~-~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i 463 (588)
..++....+ .+...++ + ++++ .+.+.+..++.++++.+.|.++ +++.+
T Consensus 384 ------~~~s~~~~Q----~~~~~~l~~p~~~~~~y~~~~~~--~~~i~~~~~~r~~~l~~~L~~~---------~gi~~ 442 (534)
T PLN02231 384 ------NLCSNISGQ----ILASLVMSPPKPGDESYESYMAE--KDGILSSLARRAKTLEDALNSL---------EGVTC 442 (534)
T ss_pred ------hcCCChHHH----HHHHHHhCCCCCCcchHHHHHHH--HHHHHHHHHHHHHHHHHHHhcC---------CCcee
Confidence 000011111 1111222 1 1111 2445667777788888888874 55666
Q ss_pred eCCCCCCCcccEEEE-EeecCCCC-------CcCHH-H-HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCC
Q 037063 464 YGPKVMFDRGPSLAF-NVFDWNGT-------RIDPA-L-VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTN 533 (588)
Q Consensus 464 ~~p~~~~~rg~iv~f-~~~~~~g~-------~i~~~-~-v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~ 533 (588)
..| .|+++.| .+.-..+. ...++ . ..+++++.||.+.+|..+. .
T Consensus 443 ~~p-----~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg----------------~----- 496 (534)
T PLN02231 443 NKA-----EGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFG----------------Q----- 496 (534)
T ss_pred cCC-----CeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccC----------------C-----
Confidence 543 4676666 22110000 00112 2 3567788999999885431 0
Q ss_pred CCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhhhccc
Q 037063 534 ETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDADFVEK 573 (588)
Q Consensus 534 ~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~~~~~ 573 (588)
..|...+|+++ ..+.|+++..++.|.+|+++ |++|
T Consensus 497 --~~g~~~~Rit~--~~~~e~l~eal~RL~~~~~~-~~~~ 531 (534)
T PLN02231 497 --VPGTWHFRCTI--LPQEDKIPAIVSRLTEFHKS-FMDE 531 (534)
T ss_pred --CCCCCeEEEEe--CCCHHHHHHHHHHHHHHHHH-HHHH
Confidence 02223799997 46889988888888887665 4543
No 239
>PRK06855 aminotransferase; Validated
Probab=99.74 E-value=1.4e-15 Score=164.64 Aligned_cols=302 Identities=13% Similarity=0.054 Sum_probs=184.4
Q ss_pred HHHHHHHHHh----C--CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 183 KIRKRIMDFM----N--ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 183 ~~r~~ia~~l----g--a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++|+.|++++ | ++++ +|++|+|+++|+.+++. + +.+||+|++....+.. +.. ......|++++.+++
T Consensus 77 ~LReaia~~~~~~~g~~~~~~--~I~it~G~~~al~~~~~-l-~~~Gd~Vlv~~P~Y~~-~~~--~~~~~~g~~~v~v~~ 149 (433)
T PRK06855 77 ETREFLAELNNKRGGAQITPD--DIIFFNGLGDAIAKIYG-L-LRREARVIGPSPAYST-HSS--AEAAHAGYPPVTYRL 149 (433)
T ss_pred HHHHHHHHHHHhccCCCCCHh--HEEEcCcHHHHHHHHHH-h-cCCCCeEEEeCCCCch-HHH--HHHHhcCCeEEEEec
Confidence 6677777765 4 4454 49999999999999985 6 7899997765444332 211 112345888888888
Q ss_pred cCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCC--cC--CCCC
Q 037063 257 AWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATA--LG--SKDM 327 (588)
Q Consensus 257 ~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~--~~--~~d~ 327 (588)
+.. +..+++++|++++.. .++++++++++++||||..++.+++ ++|+++|++||.|.+. +. +...
T Consensus 150 ~~~~~~~~d~~~l~~~~~~------~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~ 223 (433)
T PRK06855 150 DPENNWYPDLDDLENKVKY------NPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKT 223 (433)
T ss_pred ccccCCCCCHHHHHHHHhc------CCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Confidence 632 346899999999861 1357899999999999999998774 6789999999999983 21 1101
Q ss_pred CCC-CCCCCCCcEEEeccCccCCCCCCceEEEEEeC----c----chhcccCCCCCCCceEeeecCCCcccccccccccc
Q 037063 328 DTL-GLSLFKPDFLICSFYKIFGENPSGFGCLFVKK----S----SASVLSGSTSSVSTIMGIEPSFSEIIELETLDESS 398 (588)
Q Consensus 328 ~~l-~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~----~----~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~ 398 (588)
.++ .+.....-+++.|+.|.|+.+...+|++++.. . .++.+......
T Consensus 224 ~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~------------------------ 279 (433)
T PRK06855 224 VPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKMI------------------------ 279 (433)
T ss_pred CCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhcc------------------------
Confidence 111 11111123788999998875457799999842 1 11111111000
Q ss_pred cccCCCCCccchhhHHHHHHHHHH--HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE
Q 037063 399 QSKFPESSISGVSSKLVECKGLDH--ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL 476 (588)
Q Consensus 399 f~e~GT~~~~~~~~~~al~~aL~~--l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv 476 (588)
..+++.+.+ .++..+|+. .++. +++..+..++..+++.+.|.++ +++.+..| .|+..
T Consensus 280 --~~~~~~~~Q----~a~~~~l~~~~~~~~-~~~~~~~~~~r~~~~~~~L~~~---------~~~~~~~p-----~gg~~ 338 (433)
T PRK06855 280 --EVCSTTLPQ----MAIPRIMSHPEYKNY-LKERNKRYEKRSNIAYEKLKDV---------PGLKVNRT-----NGAFY 338 (433)
T ss_pred --ccCCChHHH----HHHHHhhcCCcHHHH-HHHHHHHHHHHHHHHHHHHhcC---------CCeeccCC-----CeeEE
Confidence 111222222 222333321 1111 3455666666677777887663 44554433 35544
Q ss_pred EE-EeecCC-----CCC-------------------cCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcC
Q 037063 477 AF-NVFDWN-----GTR-------------------IDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSG 531 (588)
Q Consensus 477 ~f-~~~~~~-----g~~-------------------i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~ 531 (588)
.+ .+++.- +.. -+.+.+..++.+.||.+.+|....
T Consensus 339 ~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~-------------------- 398 (433)
T PRK06855 339 MTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFC-------------------- 398 (433)
T ss_pred EeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCC--------------------
Confidence 44 333210 000 022334567888999999885431
Q ss_pred CCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 532 TNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 532 ~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.....||+|++.. +.|+++..++.|++++++
T Consensus 399 -----~~~~~~Rls~~~~-~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 399 -----TELNGFRVTLLER-DEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred -----CCCCceEEEECCC-cHHHHHHHHHHHHHHHHH
Confidence 0011599999864 689999999999998865
No 240
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.74 E-value=5.5e-16 Score=163.84 Aligned_cols=282 Identities=13% Similarity=-0.016 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHHHhC---CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 179 ELESKIRKRIMDFMN---ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 179 ~~~~~~r~~ia~~lg---a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
++.+.+.+.+.+..| ++++ +|++|+|+++++.+++..+..++||+|+++...+. .+ ...++..|++++.++
T Consensus 60 ~lr~~ia~~~~~~~~~~~~~~~--~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~-~~---~~~~~~~g~~~~~v~ 133 (357)
T TIGR03539 60 ELREAIVDWLERRRGVPGLDPT--AVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYP-TY---EVGALLAGATPVAAD 133 (357)
T ss_pred HHHHHHHHHHHHhcCCCCCCcC--eEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcH-HH---HHHHHhcCCEEeccC
Confidence 344444444444434 5454 59999999999999888765689999876554433 22 233466799887763
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC-C---CCC
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG-S---KDM 327 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~-~---~d~ 327 (588)
+.+ .+. ..++++|++++++||||..+|.++ | ++|+++|+++|+|.+... . ..+
T Consensus 134 --------~~~----~l~-------~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 194 (357)
T TIGR03539 134 --------DPT----ELD-------PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPV 194 (357)
T ss_pred --------Chh----hcC-------ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCc
Confidence 112 222 157899999999999999999665 5 788999999999998431 1 101
Q ss_pred CCCCCC----CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCC
Q 037063 328 DTLGLS----LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP 403 (588)
Q Consensus 328 ~~l~l~----~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G 403 (588)
..++.. ...-.+++.|++|.||.+...+|+++.++++++.+....... + .+
T Consensus 195 ~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~~~~~~~~~~-~------------------------~~ 249 (357)
T TIGR03539 195 SILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVAELLTVRKHA-G------------------------LM 249 (357)
T ss_pred cceecccCCCccccEEEEeccccccCCCceeEEEEecCHHHHHHHHHHHhhc-c------------------------cC
Confidence 111110 112347888999988753455899998887776554221100 0 00
Q ss_pred CCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecC
Q 037063 404 ESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDW 483 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~ 483 (588)
+..+.+ .++..+|+.-. .++.+.++.+..++++.+.|.+. ++.+..| .++++.+....
T Consensus 250 ~~~~~q----~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~L~~~----------g~~~~~p-----~~~~~~~~~~~- 307 (357)
T TIGR03539 250 VPAPVQ----AAMVAALGDDG--HVAEQKARYAARRAQLKPALEKA----------GFRIDHS-----EAGLYLWATRG- 307 (357)
T ss_pred CCHHHH----HHHHHHcCCHH--HHHHHHHHHHHHHHHHHHHHHHc----------CCCCcCC-----CccEEEEEECC-
Confidence 111111 22334443211 13555666667777888888763 2333322 35554444322
Q ss_pred CCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHH
Q 037063 484 NGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 484 ~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l 562 (588)
.+...+.+.|.++||.+.+|.... . .+..+||+|++. +.|+++++++.|
T Consensus 308 ----~~~~~~~~~l~~~gV~v~pg~~f~----------------~--------~~~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 308 ----EDAWDTVDRLAELGILVAPGDFYG----------------P--------AGSQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred ----CCHHHHHHHHHhCCEEECCccccC----------------C--------CCCCeEEEEecC--CHHHHHHHHHhh
Confidence 134566777888999999874210 0 122389999875 678888888765
No 241
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.74 E-value=9.9e-17 Score=149.68 Aligned_cols=164 Identities=16% Similarity=0.162 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWP 259 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~ 259 (588)
++++++.++++++.+++ .+++++|+|+|+.+++.++ .+++++|+ ....|++ ..| ..++..|++++.++.+ .
T Consensus 2 ~~~~~~~l~~~~~~~~~--~~~~~~~~t~a~~~~~~~~-~~~~~~v~~~~~~~~~--~~~--~~~~~~g~~~~~v~~~-~ 73 (170)
T cd01494 2 LEELEEKLARLLQPGND--KAVFVPSGTGANEAALLAL-LGPGDEVIVDANGHGS--RYW--VAAELAGAKPVPVPVD-D 73 (170)
T ss_pred HHHHHHHHHHHcCCCCC--cEEEeCCcHHHHHHHHHHh-CCCCCEEEEeecccce--ehh--hHHHhcCCEEEEeccC-C
Confidence 36899999999985443 4999999999999999998 57788855 5566665 222 3557789999999986 3
Q ss_pred CCccCH--HHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC-CCCCCCCCCC
Q 037063 260 NLRIHS--GKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK-DMDTLGLSLF 335 (588)
Q Consensus 260 ~~~i~~--e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~-d~~~l~l~~~ 335 (588)
++..+. +++++.. ..++++++++++++|++|...|+++| ++|+++|+++++|+++..+. ....++....
T Consensus 74 ~~~~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 146 (170)
T cd01494 74 AGYGGLDVAILEELK-------AKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEG 146 (170)
T ss_pred CCccchhhhhhhhcc-------ccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccc
Confidence 332222 2333322 23689999999999999999999999 99999999999999987752 1111234455
Q ss_pred CCcEEEeccCccCCCCCCceEEEEEe
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFVK 361 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v~ 361 (588)
++|+++.|+||++| +.|.|++++|
T Consensus 147 ~~d~~~~s~~K~~~--~~~~G~l~~~ 170 (170)
T cd01494 147 GADVVTFSLHKNLG--GEGGGVVIVK 170 (170)
T ss_pred cCCEEEEEcccccC--CCceEEEEeC
Confidence 69999999999999 5699999986
No 242
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.73 E-value=1.7e-16 Score=160.10 Aligned_cols=294 Identities=15% Similarity=0.096 Sum_probs=195.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcC-CEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRG-ARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G-~~v~~v~~ 256 (588)
++...++.++++++++. . .++|++++|.|..+++.+. .+||..++....-|.+... ....+..+ +....+.
T Consensus 34 D~~~~~~e~~~ae~~g~--~--a~~Fv~sGT~aN~lal~~~-~~~~~~vi~~~~aHi~~~E--~Ga~~~~~~~~~~~~~- 105 (342)
T COG2008 34 DPTTNALEQRIAELFGK--E--AALFVPSGTQANQLALAAH-CQPGESVICHETAHIYTDE--CGAPEFFGGGQKLPIV- 105 (342)
T ss_pred CHHHHHHHHHHHHHhCC--c--eEEEecCccHHHHHHHHHh-cCCCCeEEEeccccceecc--cCcHHHHcCCceeccC-
Confidence 67788999999999998 3 3999999999999999998 7999998876665532221 11112222 2222222
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCcC------CCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATALG------SKD 326 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~~------~~d 326 (588)
+.++|.+++++|+..|.. .......+.++++..+.+.-|+++|+++| +.||++|+++++|++-+. +++
T Consensus 106 ~g~~Gklt~e~v~~~i~~--~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~ 183 (342)
T COG2008 106 PGADGKLTPEDVEAAIRP--DDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVA 183 (342)
T ss_pred CCCCCCcCHHHHHHhhcC--CCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCC
Confidence 227899999999999872 11234567777777777788999999985 679999999999998222 222
Q ss_pred CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCC--CCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 327 MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGS--TSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 327 ~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~--~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
..++. -.+|.+.++++|-.|. | +-.+|+.+.+++++++.. ..|+ ++- .. +|
T Consensus 184 ~~~~~---~~~D~v~~~~tK~g~~-~-~gAiv~gn~~~~~~a~~~rK~~Gg-l~~---------------k~-r~----- 236 (342)
T COG2008 184 LKTIK---SYVDSVSFCLTKGGGA-P-VGAIVFGNRDFAKRARRWRKRAGG-LMR---------------KA-RF----- 236 (342)
T ss_pred HHHHH---hhCCEEEEecccCCcc-e-eeeEEEcCHHHHHHHHHHHHHhcc-cHh---------------hh-hH-----
Confidence 22221 2399999999997773 4 457777888887765432 1221 220 00 23
Q ss_pred CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCC
Q 037063 405 SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWN 484 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~ 484 (588)
.+ ..++-+++.--+.....|...++++|.+.|.+ .+++++..| ...++|-+.++..
T Consensus 237 ---------la-A~~~~~l~~~~~~~~~~Han~mA~~La~~~~~---------~~G~~~~~~----~~tN~vf~~l~~~- 292 (342)
T COG2008 237 ---------LA-AQGLYALEDDVWRLAADHANAMAARLAEGLEA---------KPGVKLAFP----VETNMVFVRLPES- 292 (342)
T ss_pred ---------HH-HHHHHHHhccHHHHHHHHHHHHHHHHHHhhhh---------cCCceeccC----CcccEEEEECChH-
Confidence 11 13344444322566778888899999999986 378888876 2456766666541
Q ss_pred CCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCc-cEEEEecCCCCCHHHHHHHHHHHH
Q 037063 485 GTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGV-SVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 485 g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~-~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
. ...+...|+..-.|-.- .+. ..||+-.++.++.|||+++++.++
T Consensus 293 -------~-i~~l~~~~~~~~~~~~~--------------------------~~~~~~vRfvts~a~~~edv~~~~~~~~ 338 (342)
T COG2008 293 -------A-IEALRLAGALFYRGVLI--------------------------GAHGEIVRFVTSWATSEEDVDELVAAIK 338 (342)
T ss_pred -------H-HHHHHhhchhheeeeec--------------------------cCCCceEEEEeeccCCHHHHHHHHHHHH
Confidence 1 23344444433222100 111 379999999999999999999998
Q ss_pred Hhh
Q 037063 564 RFL 566 (588)
Q Consensus 564 ~~l 566 (588)
+++
T Consensus 339 ~~~ 341 (342)
T COG2008 339 ALL 341 (342)
T ss_pred Hhh
Confidence 864
No 243
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.73 E-value=1.2e-15 Score=159.97 Aligned_cols=282 Identities=14% Similarity=0.030 Sum_probs=178.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc---CCCchhHHHHHHHHHHhcCCEEEEE
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV---YDHENEAAALMIESSKKRGARVSSA 254 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~---~e~~s~~~~~~~~~a~~~G~~v~~v 254 (588)
.++.+++++.+|+++|+++++ +++++|+++|+..++.++ .++||+|++. ...|+ .+...++..|+++...
T Consensus 53 ~~~~~~Le~~lA~~~g~~~e~--ilv~~gg~~a~~~~~~al-~~~gd~Vli~~~d~p~~~----s~~~~~~l~ga~~~~~ 125 (346)
T TIGR03576 53 AIFEEKVQELGREHLGGPEEK--ILVFNRTSSAILATILAL-EPPGRKVVHYLPEKPAHP----SIPRSCKLAGAEYFES 125 (346)
T ss_pred HHHHHHHHHHHHHHcCCCcce--EEEECCHHHHHHHHHHHh-CCCCCEEEECCCCCCCch----hHHHHHHHcCCEEecc
Confidence 477889999999999997665 999999999999999999 8999997643 23443 2344556678876322
Q ss_pred eccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccC---CHHHH-HHHHHcCcEEEEeCCCcCCCC-C-C
Q 037063 255 EFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARY---SYMWM-SVAAEKGWHVLLDATALGSKD-M-D 328 (588)
Q Consensus 255 ~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~---pl~~I-~~a~~~g~~vvvDaa~~~~~d-~-~ 328 (588)
.+.++++. . +++++|+++. ++++|.++ |+++| ++|+++|++|++|.++..+.. . .
T Consensus 126 --------~~l~~l~~--~--------~~~~lIiitg-~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~ 186 (346)
T TIGR03576 126 --------DELSELKK--I--------DGTSLVVITG-STMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYG 186 (346)
T ss_pred --------CCHHHHhh--C--------cCceEEEEEC-CCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCC
Confidence 13344321 1 4578888876 58899995 67777 889999999999999776420 0 1
Q ss_pred CCCCCCCCCcEEEeccCccC-CCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCc
Q 037063 329 TLGLSLFKPDFLICSFYKIF-GENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSI 407 (588)
Q Consensus 329 ~l~l~~~~~D~vv~S~~K~~-G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~ 407 (588)
.-......+|+++.|++|.+ | +. +|+++.++++++.+....... .| |.+.
T Consensus 187 ~~~~~~~~~divv~s~SKalaG--~r-~G~v~~~~~li~~l~~~~~~~----------------------~~----s~~~ 237 (346)
T TIGR03576 187 QPPALDLGADLVVTSTDKLMDG--PR-GGLLAGRKELVDKIKSVGEQF----------------------GL----EAQA 237 (346)
T ss_pred CCCHHHcCCcEEEeccchhccc--cc-eEEEEeCHHHHHHHHHhhcCc----------------------cc----CccH
Confidence 10011234799999999966 5 44 699999998887765433110 01 1111
Q ss_pred cchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCC
Q 037063 408 SGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTR 487 (588)
Q Consensus 408 ~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~ 487 (588)
+. .++..++|+.+ ..+.+.++.+...+.+.+.+.++ .++ + ..++.+-+.+...
T Consensus 238 ~~---~~aa~~aL~~~---~~~~~~~~l~~r~~~~~~~l~~~------------~~~-~----~~~~f~~~~~~~~---- 290 (346)
T TIGR03576 238 PL---LAAVVRALEEF---ELSRIRDAFKRKEEVYLRLFDKL------------NVE-R----TPTGFVIKGVEEE---- 290 (346)
T ss_pred HH---HHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhC------------CCC-c----CCCeEEEEeCCCC----
Confidence 11 13444566542 23445555566666666655543 122 1 1223333333220
Q ss_pred cCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCC-CHHHHHHHHHHHHHhh
Q 037063 488 IDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLT-NFEDTYRLWAFVSRFL 566 (588)
Q Consensus 488 i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~-t~eDv~~li~~l~~~l 566 (588)
-+.+.+.++|.++||.+++|..- . ...++||+|++... +..+.++++++|++-|
T Consensus 291 ~~~~~~~~ll~~~gV~v~~~~~f----------------~---------~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 291 KLIEIGLDLLRNYGIITITAVGM----------------P---------GASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred CHHHHHHHHHHhCCEEEeCCccc----------------C---------CCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 12356789999999999976210 0 01129999988321 1127999999998765
No 244
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.73 E-value=1.9e-15 Score=159.86 Aligned_cols=306 Identities=16% Similarity=0.106 Sum_probs=189.1
Q ss_pred eeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHH
Q 037063 112 YVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDF 191 (588)
Q Consensus 112 ~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~ 191 (588)
.-|+.+-.+++.+..++-.+...... .|.. .|+ ..+ ...+++.++-+.++++
T Consensus 40 P~~~~~~~~~~~~~~i~~~~l~~~~n---~n~~-------~~~----------~~P--------~~~~~E~~vi~~l~~l 91 (373)
T PF00282_consen 40 PRFFGFVPGGPSPASILADLLASALN---QNGF-------TWE----------ASP--------AATEIEREVIRWLADL 91 (373)
T ss_dssp TTBESSSHT--CHHHHHHHHHHHHHT----BTT-------STT----------TSH--------HHHHHHHHHHHHHHHH
T ss_pred hhHhhhccCCccHHHHHHHHHHhhhc---cccc-------ccc----------ccc--------ccccchHHHHHHHHHH
Confidence 45788888888888777765433321 1110 011 011 1278999999999999
Q ss_pred hCCCCC-----CceEEEecCHHHHHHHHHHhCC-----------CCCCCe--EEEcC-CCchhHHHHHHHHHHhcCCEEE
Q 037063 192 MNISED-----DYTLVFTANQSSAFKLLAESYP-----------FYSNPR--LLTVY-DHENEAAALMIESSKKRGARVS 252 (588)
Q Consensus 192 lga~~~-----e~~vvft~g~T~al~lv~~s~~-----------~~~gd~--ll~~~-e~~s~~~~~~~~~a~~~G~~v~ 252 (588)
+|.+.+ +-.-+||+|+|+++-..+.+.. .....+ |++.. .|+| + .+.|.-.|..++
T Consensus 92 ~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S--~---~Kaa~~lGlg~~ 166 (373)
T PF00282_consen 92 FGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYS--I---EKAARILGLGVR 166 (373)
T ss_dssp TTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-TH--H---HHHHHHTTSEEE
T ss_pred hCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccH--H---HHhcceeeeEEE
Confidence 999722 2458999999999754433221 110223 44443 4543 2 567788899999
Q ss_pred EEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC----CCC
Q 037063 253 SAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS----KDM 327 (588)
Q Consensus 253 ~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~----~d~ 327 (588)
.||++ +++++|.++|+++|.+. ......+-+|+.+..++.+|.+-|+++| ++|++++++++||||-... ...
T Consensus 167 ~I~~~-~~~~md~~~L~~~l~~~--~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~ 243 (373)
T PF00282_consen 167 KIPTD-EDGRMDIEALEKALEKD--IANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPEY 243 (373)
T ss_dssp EE-BB-TTSSB-HHHHHHHHHHH--HHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTT
T ss_pred EecCC-cchhhhHHHhhhhhccc--ccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccccccccc
Confidence 99999 78999999999999731 1111234579999999999999999999 9999999999999984441 223
Q ss_pred CCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcch-h-cc--cCCCCCCCceEeeecCCCcccccccccccccccCC
Q 037063 328 DTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSA-S-VL--SGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP 403 (588)
Q Consensus 328 ~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~-~-~l--~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G 403 (588)
..+.....++|.+.+++|||++. |.++|++++|++.. . .+ .+.+.+. .. ... ....+.. -+.-.|
T Consensus 244 ~~~~~gi~~adSit~d~HK~l~~-P~~~~~~l~r~~~~l~~~~~~~~~Yl~~--~~---~~~--~~~~~~~---~~tl~~ 312 (373)
T PF00282_consen 244 RHLLFGIERADSITIDPHKWLGV-PYGCGVLLVRDKSDLRDAFSINADYLGN--DD---RES--DESYDYG---DYTLQG 312 (373)
T ss_dssp GGGGTTGGGESEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT---S----SSS---GGGCEE---EGSSSS
T ss_pred cccccccccccccccchhhhhcC-CccceeEEeecccchHHHhccChhhhcc--cc---ccc--ccccccc---cccccc
Confidence 33333345599999999999987 99999999998643 2 11 1112110 00 000 0000000 000011
Q ss_pred CCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEee
Q 037063 404 ESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVF 481 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~ 481 (588)
+..+.. ..+...++.+-..|+.++.++..++++++.+.|++. +.+++..+ ...++|+|.++
T Consensus 313 SR~~~a----lk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~---------~~~el~~~----~~~~~vcFr~k 373 (373)
T PF00282_consen 313 SRRFRA----LKLWATLKSLGREGYRERIRRCIELARYLADRLRKD---------PRFELVNE----PDLNIVCFRYK 373 (373)
T ss_dssp SGHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---------TTEEESST----TSSSEEEEEES
T ss_pred cccchH----HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC---------CCEEEEcC----CCceEEEEEeC
Confidence 111111 234456666655678888888899999999999984 66898875 45789999863
No 245
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.72 E-value=1.2e-15 Score=161.68 Aligned_cols=279 Identities=13% Similarity=0.006 Sum_probs=172.5
Q ss_pred HHHHHHHHHh----C---CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 183 KIRKRIMDFM----N---ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 183 ~~r~~ia~~l----g---a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
++|+.|++++ | ++++ +|++|+|+++++.+++..+.+++||+|+++...+... ...++..|+++..++
T Consensus 66 ~lr~~ia~~l~~~~~~~~~~~~--~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~~~ 139 (364)
T PRK07865 66 ELREAIVGWLARRRGVTGLDPA--AVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTY----EVGARLAGATVVRAD 139 (364)
T ss_pred HHHHHHHHHHHHHcCCCCCCcc--cEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccH----HHHHHhcCCEEEecC
Confidence 4556666655 5 4455 4999999999999988877568999987655443322 334566799888764
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC-CC---CC
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG-SK---DM 327 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~-~~---d~ 327 (588)
. .++ +.. .++++|+++.++||||..++.++ | ++|+++|+++|+|.+..- .. .+
T Consensus 140 ~--------~~~----l~~-------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 200 (364)
T PRK07865 140 S--------LTE----LGP-------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPV 200 (364)
T ss_pred C--------hhh----CCc-------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCC
Confidence 1 122 220 46899999999999999999765 4 678999999999998432 10 01
Q ss_pred CCCCC---C-CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCC
Q 037063 328 DTLGL---S-LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP 403 (588)
Q Consensus 328 ~~l~l---~-~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G 403 (588)
..+.. . ...-.+++.|++|.||.+..++|+++.++++++.+....... + ..
T Consensus 201 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~~~~~~~~-~------------------------~~ 255 (364)
T PRK07865 201 SILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELLEVRKHA-G------------------------MM 255 (364)
T ss_pred ccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHHHHHHHHHhc-C------------------------CC
Confidence 11110 0 112348899999999754456999998888776554322100 0 00
Q ss_pred CCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecC
Q 037063 404 ESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDW 483 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~ 483 (588)
++.+.+ .++..+|+.-.. +++..++.+..++++.+.|.++ ++.+..| .+++..+.-.+
T Consensus 256 ~~~~~q----~~~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~-----~~~~~~~~~~~- 313 (364)
T PRK07865 256 VPAPVQ----AAMVAALGDDAH--VREQRERYARRRAVLRPALEAA----------GFRVDHS-----EAGLYLWATRG- 313 (364)
T ss_pred cCHHHH----HHHHHHhCCHHH--HHHHHHHHHHHHHHHHHHHHHc----------CCcccCC-----CccEEEEEeCC-
Confidence 111111 223334432111 3555666677777888888763 2334332 34443332222
Q ss_pred CCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 484 NGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 484 ~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
.+...+.+.|.++||.+.+|.... . .+..++|++++. +.|+++++++.|+
T Consensus 314 ----~~~~~~~~~l~~~gv~v~pg~~f~----------------~--------~~~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 314 ----EDCWDTVAWLAERGILVAPGDFYG----------------P--------AGAQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred ----CCHHHHHHHHHHCCEEEeCccccC----------------c--------CCCCEEEEEecC--CHHHHHHHHHHhh
Confidence 234566777888999998874221 0 112389999874 6899999988764
No 246
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.72 E-value=2.9e-15 Score=159.48 Aligned_cols=289 Identities=10% Similarity=0.072 Sum_probs=182.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--CC----CCCeEEE-cCCCchhHHHHHHHHHHhcCCE
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--FY----SNPRLLT-VYDHENEAAALMIESSKKRGAR 250 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--~~----~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~ 250 (588)
.+...++.+++++++|.+ .++++.|+++|+.+++..+. .. ++++|++ ...||. ...+.. . .++.
T Consensus 68 ~~~~~~l~~~la~~~g~~----~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~-~~~~~~-~---~~~~ 138 (379)
T TIGR00707 68 TEPQEELAEKLVEHSGAD----RVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHG-RTMGAL-S---ATGQ 138 (379)
T ss_pred CHHHHHHHHHHHhhCCCC----EEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCC-ccHHHH-H---hcCC
Confidence 356779999999999974 49999999999998877541 11 3678664 444443 221211 1 1211
Q ss_pred EE----EEeccCCCCc----cCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCcc-CC---HHHH-HHHHHcCcEEEE
Q 037063 251 VS----SAEFAWPNLR----IHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGAR-YS---YMWM-SVAAEKGWHVLL 317 (588)
Q Consensus 251 v~----~v~~~~~~~~----i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~-~p---l~~I-~~a~~~g~~vvv 317 (588)
.. ..+.. .+.. -|++++++.++ +++++|++...++++|.. .+ +++| ++|+++|+++++
T Consensus 139 ~~~~~~~~~~~-~~~~~~~~~d~~~l~~~~~--------~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~ 209 (379)
T TIGR00707 139 PKYQKGFEPLV-PGFSYAPYNDIESLKKAID--------DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIF 209 (379)
T ss_pred hhhhccCCCCC-CCceeeCCCCHHHHHHHhh--------hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 11 11111 1111 17889998887 578999999888888875 34 6677 899999999999
Q ss_pred eCCCc-CCCCC--CCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 318 DATAL-GSKDM--DTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 318 Daa~~-~~~d~--~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
|+++. ++.+- ..+......+|++ ++.|.+| ++.++|+++.++++++.+.....+.
T Consensus 210 De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~-~G~riG~~~~~~~~~~~~~~~~~~~------------------- 267 (379)
T TIGR00707 210 DEVQTGIGRTGKFFAYEHYGIEPDII--TLAKGLG-GGVPIGATLAKEEVAEAFTPGDHGS------------------- 267 (379)
T ss_pred eccccCCCccchhhhHHhcCCCCCEE--EEccccc-CCcccEEEEEcHHHHhhhcCCCCCC-------------------
Confidence 99965 32110 1111112236765 5789888 3567999999988877665432110
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
.| + .+... .++..++|+.+.. ..+.++.++++++++++|.++... ..+ .+ . ...|.
T Consensus 268 ---~~---~-~~~~~---~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~------~~~---~~-~-~~~g~ 323 (379)
T TIGR00707 268 ---TF---G-GNPLA---CAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELGKN------YPN---KE-V-RGKGL 323 (379)
T ss_pred ---CC---C-CCHHH---HHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhh------CCC---Cc-c-ccCce
Confidence 01 1 11112 2455567776653 346677888888888888764110 011 11 1 12355
Q ss_pred EEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHH
Q 037063 475 SLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFED 554 (588)
Q Consensus 475 iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eD 554 (588)
++.+.+.+ +...+.+.|.++||.++++. ...||+++++..+.||
T Consensus 324 ~~~~~~~~------~~~~~~~~l~~~Gv~v~~~~------------------------------~~~lRi~~~~~~t~~~ 367 (379)
T TIGR00707 324 MLGIELEA------PCKDIVKKALEKGLLVNCAG------------------------------PKVLRFLPPLIITKEE 367 (379)
T ss_pred EEEEEecC------cHHHHHHHHHHCCcEEeeCC------------------------------CCEEEEECCCcCCHHH
Confidence 66666543 24667777888999987531 1289999999999999
Q ss_pred HHHHHHHHHHhh
Q 037063 555 TYRLWAFVSRFL 566 (588)
Q Consensus 555 v~~li~~l~~~l 566 (588)
++++++.|++.+
T Consensus 368 i~~~~~~l~~~~ 379 (379)
T TIGR00707 368 IDEAVSALEEAI 379 (379)
T ss_pred HHHHHHHHHHhC
Confidence 999999998753
No 247
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.72 E-value=3e-15 Score=156.99 Aligned_cols=271 Identities=12% Similarity=0.018 Sum_probs=174.8
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNL 261 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~ 261 (588)
.++|+.|++++|+++. .+|++|+|+++++.++.. + +++|+ +++....++ .....++..|++++.++.+.
T Consensus 56 ~~L~~~ia~~~~~~~~-~~I~i~~Gs~e~i~~l~~-~-~~~g~-v~v~~P~y~----~y~~~~~~~g~~~~~v~~~~--- 124 (339)
T PRK06959 56 DGLAACAARYYGAPDA-AHVLPVAGSQAAIRALPA-L-LPRGR-VGIAPLAYS----EYAPAFARHGHRVVPLDEAA--- 124 (339)
T ss_pred HHHHHHHHHHhCCCCc-ccEEECcCHHHHHHHHHH-h-cCCCe-EEEcCCCcH----HHHHHHHHCCCEEEeecccc---
Confidence 6899999999999631 249999999999998765 4 57776 554443332 22455677899999887641
Q ss_pred ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HH---HHHcCcEEEEeCCCc--CC-CCCCCCCCCC
Q 037063 262 RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SV---AAEKGWHVLLDATAL--GS-KDMDTLGLSL 334 (588)
Q Consensus 262 ~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~---a~~~g~~vvvDaa~~--~~-~d~~~l~l~~ 334 (588)
..+. ..+++++++.++||||..++.+++ ++ +++++.++|+|.+-. .+ ..+..+ ..
T Consensus 125 --------~~~~--------~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~--~~ 186 (339)
T PRK06959 125 --------DTLP--------AALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAH--TD 186 (339)
T ss_pred --------hhcc--------ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhc--cC
Confidence 1222 345789999999999999999987 55 456789999999832 22 111111 11
Q ss_pred CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHH
Q 037063 335 FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKL 414 (588)
Q Consensus 335 ~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~ 414 (588)
.+--+++.||.|.||.+..++|+++.++++++.+...... +.+ ..+.+ .
T Consensus 187 ~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~~~~--~~v-------------------------s~~~q----~ 235 (339)
T PRK06959 187 RPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDALGA--WTV-------------------------SGPAR----H 235 (339)
T ss_pred CCCEEEEecChhhcCCcchheEEEecCHHHHHHHHHhcCC--CCC-------------------------cHHHH----H
Confidence 1123788899999996556799999998888776543311 000 00111 2
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHH
Q 037063 415 VECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQ 494 (588)
Q Consensus 415 al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~ 494 (588)
++..+|+.-. . .+...+++++.++++.+.|+++ | ++++. .+..+-+.+. +...+.
T Consensus 236 a~~~~L~~~~-~-~~~~~~~~~~~r~~l~~~L~~~-------g---~~~~~------~~~f~~~~~~-------~~~~l~ 290 (339)
T PRK06959 236 AVRAAFADAA-W-QAAMRERLAADGARLAALLRAH-------G---FAVHA------TPLFSWTDDP-------RAAALH 290 (339)
T ss_pred HHHHHhCcHH-H-HHHHHHHHHHHHHHHHHHHHHC-------C---CCccC------cceEEEEeCC-------CHHHHH
Confidence 3334443211 1 3556677777788888888875 2 22221 1222222221 255677
Q ss_pred HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 495 KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 495 ~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+.|.++||.|+. |. ..+ +||||++ .+.+|+++|+++|+++++.
T Consensus 291 ~~l~~~GI~vr~---~~------------------------~~~--~lRisi~--~~~~e~~~l~~al~~~~~~ 333 (339)
T PRK06959 291 AALARRGIWTRY---FA------------------------PPP--SVRFGLP--ADEAEWQRLEDALAECVPT 333 (339)
T ss_pred HHHHhCCeEEEE---CC------------------------CCC--eEEEECC--CCHHHHHHHHHHHHHHHHH
Confidence 788889999973 21 022 8999973 2778999999999987654
No 248
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.71 E-value=4e-16 Score=151.62 Aligned_cols=295 Identities=12% Similarity=0.097 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHH-HHHHHhcCCEEEEEeccCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALM-IESSKKRGARVSSAEFAWP 259 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~-~~~a~~~G~~v~~v~~~~~ 259 (588)
..++.+++|+++|-. .-.|++++|.+..+.+..---++|.+|+..+..| ++.|- -.++.-.|+.++.+... +
T Consensus 58 t~rLE~~vA~l~GKE----AgLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~H--I~~~E~gg~s~l~gv~~~tv~~e-~ 130 (384)
T KOG1368|consen 58 TNRLEQRVAELFGKE----AGLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAH--IHRYEQGGISQLAGVHVRTVKNE-N 130 (384)
T ss_pred HHHHHHHHHHHhCcc----ceeeecccccccHHHHHHHhcCCCceEEeccchh--eeehhccChhhhccceeEeeeeC-C
Confidence 458899999999974 2788888888877777766467899987765555 34331 13344568888888876 8
Q ss_pred CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCC-ccCCHHHH----HHHHHcCcEEEEeCCCcC------CCCCC
Q 037063 260 NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTG-ARYSYMWM----SVAAEKGWHVLLDATALG------SKDMD 328 (588)
Q Consensus 260 ~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG-~~~pl~~I----~~a~~~g~~vvvDaa~~~------~~d~~ 328 (588)
++.+++++|+++|.-.+.....+.|+||++....|.+| ..+|++|+ ++|+++|+.++.|+|-.. ++.++
T Consensus 131 dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk 210 (384)
T KOG1368|consen 131 DGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVK 210 (384)
T ss_pred CCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHH
Confidence 89999999999997211122346899999999999888 99999996 789999999999998221 22234
Q ss_pred CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcc---cCCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 329 TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVL---SGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 329 ~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l---~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
.+. .-+|.+...++|-+|. |-| .+++.+++++++. ++...| |+ | +.|-
T Consensus 211 ~i~---~~fDSVsiCLSKglgA-PVG-SViVG~k~FI~kA~~~RKalGG--Gm-------------------R--QsGv- 261 (384)
T KOG1368|consen 211 KIC---SAFDSVSICLSKGLGA-PVG-SVIVGSKDFIDKARHFRKALGG--GM-------------------R--QSGV- 261 (384)
T ss_pred HHH---HhhhhhhhhhhccCCC-Ccc-cEEEccHHHHHHHHHHHHHhcC--ch-------------------h--HHHH-
Confidence 432 1278899999998886 876 6777888888754 344444 33 1 1111
Q ss_pred CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCC
Q 037063 406 SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNG 485 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g 485 (588)
.. ++...+|+.-..+ +..-.++...|++++. ++ +.+++.-|. ....++.+++....
T Consensus 262 --La----aaaLval~~~~~~-L~~dHk~A~~lAe~~~----~~---------~~i~v~v~a---~etNiv~~~l~q~~- 317 (384)
T KOG1368|consen 262 --LA----AAALVALDENVPL-LRADHKRAKELAEYIN----TP---------EEIRVEVPA---VETNIVNMVLCQAR- 317 (384)
T ss_pred --HH----HHHHHHhhcchHH-HHHHHHHHHHHHHHhc----cc---------cceeeecch---hhcceeeeeccccc-
Confidence 11 1112344432221 3444555555555544 42 446665542 35678888775543
Q ss_pred CCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHH-HH
Q 037063 486 TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFV-SR 564 (588)
Q Consensus 486 ~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l-~~ 564 (588)
++++++.+.++++||.+-.|.. ..+|+.||+--|.++|+.++..+ ++
T Consensus 318 --~~~~~l~~~~~k~gi~lm~~~s------------------------------~r~Rivlh~Qvt~~~ve~~~~~~~k~ 365 (384)
T KOG1368|consen 318 --LTAEELCKFLEKNGILLMGGAS------------------------------RRIRIVLHHQVTDEDVEYVKSVLSKK 365 (384)
T ss_pred --CCHHHHHHHHHHCCeEEeeccc------------------------------cceEEEEEEecCHHHHHHHHHHHHHH
Confidence 8899999999999998865521 16999999999999999999999 44
Q ss_pred hhh
Q 037063 565 FLD 567 (588)
Q Consensus 565 ~l~ 567 (588)
|+.
T Consensus 366 ~~~ 368 (384)
T KOG1368|consen 366 FLK 368 (384)
T ss_pred HHh
Confidence 443
No 249
>PRK05839 hypothetical protein; Provisional
Probab=99.71 E-value=1.1e-14 Score=154.97 Aligned_cols=176 Identities=14% Similarity=0.049 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCC-CCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPF-YSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~-~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
++.+.+.+.+.+..|.+-+...|++|+|+++++.+++..+-+ ++||.|++....+... ...++..|++++.++.+
T Consensus 64 ~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~----~~~~~~~g~~v~~v~~~ 139 (374)
T PRK05839 64 SLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIY----EGAAIASRAKVLLMPLT 139 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhh----HHHHHhcCCEEEEeecc
Confidence 444445555555556332233599999999999998887633 4788887765544322 34456789999999986
Q ss_pred CC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCc--CC-CCCCC
Q 037063 258 WP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATAL--GS-KDMDT 329 (588)
Q Consensus 258 ~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~--~~-~d~~~ 329 (588)
.. ...++.++. .+ +++++|++++++||||..++.+++ ++|+++|+++|+|.+-. .. .....
T Consensus 140 ~~~~~~~d~~~~--~~---------~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s 208 (374)
T PRK05839 140 KENDFTPSLNEK--EL---------QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPS 208 (374)
T ss_pred cccCCcCCcchh--hh---------ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCC
Confidence 22 233443322 22 358999999999999999998875 66889999999999822 11 00111
Q ss_pred -CC------CCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhccc
Q 037063 330 -LG------LSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLS 369 (588)
Q Consensus 330 -l~------l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~ 369 (588)
+. ...+.--+++.|+.|.||.+..++|+++.++++++.+.
T Consensus 209 ~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~~ 255 (374)
T PRK05839 209 LLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDASILKKYK 255 (374)
T ss_pred HhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHHHHHHHH
Confidence 11 11112347888999988865677999999887776554
No 250
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.71 E-value=1.9e-15 Score=162.32 Aligned_cols=297 Identities=15% Similarity=0.055 Sum_probs=172.7
Q ss_pred HHHHHHHHHHh---CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCC---------
Q 037063 182 SKIRKRIMDFM---NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGA--------- 249 (588)
Q Consensus 182 ~~~r~~ia~~l---ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~--------- 249 (588)
.++|+.|++++ ++++++ |++|+|+++++.++. .+ +.+||+|++....+..+ ...++..|+
T Consensus 78 ~~lr~aia~~~~~~~~~~d~--I~it~Ga~~al~~l~-~l-~~~gd~Vlv~~P~y~~~----~~~~~~~g~~~~~~~~~~ 149 (402)
T TIGR03542 78 PFLREAIAENDYRGRIDPEE--IFISDGAKCDVFRLQ-SL-FGSDNTVAVQDPVYPAY----VDSNVMAGRAGVLDDDGR 149 (402)
T ss_pred HHHHHHHHHHHHhcCCCHHH--EEECCCcHHHHHHHH-Hh-cCCCCEEEEeCCCCcch----HHHHHHcCCccccccccc
Confidence 47888888876 677665 999999999999875 45 57899977654443312 445567788
Q ss_pred --EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC
Q 037063 250 --RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG 323 (588)
Q Consensus 250 --~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~ 323 (588)
+++.++.+ ++..+..+ +. . ..++++|++++++||||..++.++ | ++|+++|+++|+|.+..-
T Consensus 150 ~~~~~~v~~~-~~~~~~~~-~~---~-------~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~ 217 (402)
T TIGR03542 150 YSKITYLPCT-KENNFIPD-LP---E-------EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSA 217 (402)
T ss_pred cceEEEeecc-hhhCCCCC-cc---c-------cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhh
Confidence 88888875 22112221 11 1 146899999999999999999554 5 788999999999998321
Q ss_pred --CCC--CCCC-CCCCC-CCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccccc
Q 037063 324 --SKD--MDTL-GLSLF-KPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDES 397 (588)
Q Consensus 324 --~~d--~~~l-~l~~~-~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~ 397 (588)
.-+ ...+ .+... ..-+++.|+.|.||.+..++|++++.++++......... .. . ...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~--~~------------~-~~~-- 280 (402)
T TIGR03542 218 FISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQ--DW------------E-RRQ-- 280 (402)
T ss_pred hccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHHHhhcchhhHHH--HH------------H-HHh--
Confidence 100 0111 11111 123668899999986556799999988765111000000 00 0 000
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 398 SQSKFPESSISGVSSKLVECKGLDHADALG---LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 398 ~f~e~GT~~~~~~~~~~al~~aL~~l~~~G---~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
.....+...+.+ . .+...+...+ +.+..++.+..++++.+.|.+. +++++.+ ..+.
T Consensus 281 ~~~~~~~s~~~q----~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~----------~~~~~~~----~~~~ 339 (402)
T TIGR03542 281 CTKFNGASYPVQ----R---AAEAAYAGEGLQPILEAISYYMENARILRKALEAA----------GFKVYGG----EHAP 339 (402)
T ss_pred hhcccCCCHHHH----H---HHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc----------CceecCC----Ccee
Confidence 000001111111 1 1222222111 2233344555566777777763 2444433 1234
Q ss_pred EEEEEeecCCCCCcCHHHH-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHH
Q 037063 475 SLAFNVFDWNGTRIDPALV-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFE 553 (588)
Q Consensus 475 iv~f~~~~~~g~~i~~~~v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~e 553 (588)
.+-+.+++ .++...+ ..++++.||.++.|.... . .+.+++|+|++ .+.+
T Consensus 340 f~~v~l~~----~~~~~~l~~~l~~~~gv~v~pg~~f~----------------~--------~~~~~iRis~~--~~~~ 389 (402)
T TIGR03542 340 YLWVKTPE----GISSWDFFDFLLYQYHVVGTPGSGFG----------------P--------SGEGFVRFSAF--GKRE 389 (402)
T ss_pred EEEEECCC----CCCHHHHHHHHHHhCCEEEeCchhhC----------------C--------CCCCEEEEEec--CCHH
Confidence 44455443 1445454 455667899999874321 0 12239999964 3789
Q ss_pred HHHHHHHHHHHhh
Q 037063 554 DTYRLWAFVSRFL 566 (588)
Q Consensus 554 Dv~~li~~l~~~l 566 (588)
++.+.++.|++.|
T Consensus 390 ~l~~~l~~l~~~~ 402 (402)
T TIGR03542 390 NIVEACERIKEAL 402 (402)
T ss_pred HHHHHHHHHHhhC
Confidence 9999998887653
No 251
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.71 E-value=2.2e-15 Score=152.84 Aligned_cols=342 Identities=14% Similarity=0.103 Sum_probs=230.0
Q ss_pred CCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCch--hHHHHHHHHHHHHHhCCC
Q 037063 118 IGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEE--SELESKIRKRIMDFMNIS 195 (588)
Q Consensus 118 a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~--~~~~~~~r~~ia~~lga~ 195 (588)
|+-...|..|++++...+... |..+.+. +.+||+.+ .+++.-+.++..++||++
T Consensus 33 ASEN~~S~aV~~A~gS~ltnK-----------------------YAEGyPg-kRyYgGce~VD~vE~laierak~LFga~ 88 (413)
T COG0112 33 ASENFTSPAVMEAQGSDLTNK-----------------------YAEGYPG-KRYYGGCEYVDEVEELAIERAKKLFGAE 88 (413)
T ss_pred eccccCCHHHHHHHhhhhhhc-----------------------cccCCCC-ccccCCCeeHHHHHHHHHHHHHHHhCCC
Confidence 666788999999976555322 1122223 34566664 788888999999999996
Q ss_pred CCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchh-HHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHh
Q 037063 196 EDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENE-AAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIV 273 (588)
Q Consensus 196 ~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~-~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~ 273 (588)
|.=|=--+++.|...+..++ ++|||+|+ .+..|..- ++..-..+.... .+++..+++.+++.||.|++++.+.
T Consensus 89 ---~anVQPhSGs~AN~av~~Al-l~pGDtimgm~l~~GGHltHg~~v~~sG~~-~~~v~Y~vd~et~~IDyD~~~k~a~ 163 (413)
T COG0112 89 ---YANVQPHSGSQANQAVYLAL-LQPGDTIMGLDLSHGGHLTHGSPVNFSGKL-FNVVSYGVDPETGLIDYDEVEKLAK 163 (413)
T ss_pred ---ccccCCCCchHHHHHHHHHH-cCCCCeEecccCCCCCcccCCCCCCcccee-EEeEecccccccCccCHHHHHHHHH
Confidence 33344456677778888888 99999976 22222110 111001222222 5677778887779999999999988
Q ss_pred hhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC-----CCCCCCCCCCCCCcEEEeccCc-
Q 037063 274 GKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS-----KDMDTLGLSLFKPDFLICSFYK- 346 (588)
Q Consensus 274 ~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~-----~d~~~l~l~~~~~D~vv~S~~K- 346 (588)
+ .+++|++.-.. ..-..+|++++ ++|.+.|+++++|.||..| .-.+++.. +|++.+|.||
T Consensus 164 e-------~kPK~ii~G~S--aY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~----AdvVTtTTHKT 230 (413)
T COG0112 164 E-------VKPKLIIAGGS--AYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH----ADVVTTTTHKT 230 (413)
T ss_pred H-------hCCCEEEECcc--ccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc----cceEeCCcccC
Confidence 4 67888877532 34577899999 9999999999999998775 22355542 8999999999
Q ss_pred cCCCCCCceEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHH
Q 037063 347 IFGENPSGFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADA 425 (588)
Q Consensus 347 ~~G~~P~G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~ 425 (588)
+.| |.| |+++.++ ++.+++....+.| . .|.|...-+ ++...|+....+
T Consensus 231 lrG--PrG-G~Il~~~eel~kkin~aVFPg--~-----------------------qggpl~Hvi---AakaVa~~Eal~ 279 (413)
T COG0112 231 LRG--PRG-GIILTNDEELAKKINSAVFPG--L-----------------------QGGPLMHVI---AAKAVAFKEALE 279 (413)
T ss_pred CCC--CCc-eEEEeccHHHHHHhhhhcCCc--c-----------------------CCChHHHHH---HHHHHHHHHHcC
Confidence 667 876 8888886 6777777655442 1 122333333 676677777777
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEec
Q 037063 426 LGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLS 505 (588)
Q Consensus 426 ~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~ 505 (588)
-+.+...+++...++.|.+.|.+. ++++++-. .....+...+.+. | ++...+.+.|.+.||.+-
T Consensus 280 p~fk~Ya~qVv~NAkaLAe~l~~~----------G~~vvsGg---TdnHl~lVDl~~~-~--~~Gk~ae~~L~~~~It~N 343 (413)
T COG0112 280 PEFKEYAKQVVKNAKALAEALKER----------GFKVVSGG---TDNHLVLVDLRSK-G--LTGKKAEAALERAGITVN 343 (413)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc----------CCeEecCC---ccceEEEEEcccC-C--CCHHHHHHHHHHcCEeec
Confidence 778888999999999999999984 46666532 3456777776632 2 678889999999999863
Q ss_pred cccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCC----CHHHHHHHHHHHHHhhhh
Q 037063 506 CGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLT----NFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 506 ~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~----t~eDv~~li~~l~~~l~~ 568 (588)
--.. |+-.. +.+-...|||..--.| .++|+..+.+.|.+.|+.
T Consensus 344 KN~i--P~D~~------------------~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 344 KNAI--PFDPE------------------SPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred cCCC--CCCCC------------------CCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 2100 11000 0011125777654333 467999999999988875
No 252
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.70 E-value=1.9e-15 Score=163.12 Aligned_cols=303 Identities=13% Similarity=0.087 Sum_probs=172.6
Q ss_pred HHHHHHHHHh----C--CCCCCceEEEecCHHHHHHHHHHhCCCC-----CCCeEEE--cCCCchhHHHHHHHHHHhcC-
Q 037063 183 KIRKRIMDFM----N--ISEDDYTLVFTANQSSAFKLLAESYPFY-----SNPRLLT--VYDHENEAAALMIESSKKRG- 248 (588)
Q Consensus 183 ~~r~~ia~~l----g--a~~~e~~vvft~g~T~al~lv~~s~~~~-----~gd~ll~--~~e~~s~~~~~~~~~a~~~G- 248 (588)
++|+.|++++ | ++++ +|++|+|+++|+.+++..+ .+ +||+|++ ...|+. +. ..+...|
T Consensus 78 ~LR~aia~~~~~~~g~~v~~~--~I~it~Ga~~al~~~~~~l-~~~~~~~~gd~v~i~~~P~y~~-y~----~~~~~~~~ 149 (416)
T PRK09440 78 ELIEALAALLNERYGWNISPQ--NIALTNGSQSAFFYLFNLF-AGRRADGSLKKILFPLAPEYIG-YA----DAGLEEDL 149 (416)
T ss_pred HHHHHHHHHHHHHhCCCCChh--hEEEccChHHHHHHHHHHH-hccccCCCCCeEEEecCCCchh-hH----HHhhccCc
Confidence 5666666665 4 5555 4999999999999999988 53 5888765 334442 21 1122112
Q ss_pred ---CEEEEEeccCC--CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeC
Q 037063 249 ---ARVSSAEFAWP--NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDA 319 (588)
Q Consensus 249 ---~~v~~v~~~~~--~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDa 319 (588)
.....++++.+ ...+++++|+ +. .++++++++.++||||..++.++ | ++|++++++||+|.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~d~~~l~--~~--------~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De 219 (416)
T PRK09440 150 FVSYRPNIELLPEGQFKYHVDFEHLH--ID--------EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDN 219 (416)
T ss_pred eeecccccccccccccccCCCHHHcc--cC--------CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeC
Confidence 22223333311 2357888886 34 57899999999999999999766 4 67889999999999
Q ss_pred CCcCCCC-CCCCCCC--CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccc
Q 037063 320 TALGSKD-MDTLGLS--LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDE 396 (588)
Q Consensus 320 a~~~~~d-~~~l~l~--~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~ 396 (588)
+...... ..-.+.. ...--+++.|++|. +.+..++|+++..+++++.+.......
T Consensus 220 ~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~l~~~~~~~~~~~--------------------- 277 (416)
T PRK09440 220 AYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEEIIEALSNMNGII--------------------- 277 (416)
T ss_pred CccccCCCcchhhcCccccCCeEEEeccccc-CCCcceEEEEeCCHHHHHHHHHHHHHh---------------------
Confidence 9643210 1000110 01123678899995 654567999999888776654322110
Q ss_pred cccccCCCCCccchhhHHHHHHHHHH--HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC--eEEEeCCCCCCCc
Q 037063 397 SSQSKFPESSISGVSSKLVECKGLDH--ADALGLILISNRARYLINWLANALMNLHHPHSETGIP--LVRIYGPKVMFDR 472 (588)
Q Consensus 397 ~~f~e~GT~~~~~~~~~~al~~aL~~--l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~--~v~i~~p~~~~~r 472 (588)
..+++.+.+ .++..+|+. +.+.-.+.+.++.++..+.+++.|.+. .+ .+.+..| .
T Consensus 278 ----~~~~s~~~q----~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~--------l~~~~~~~~~p-----~ 336 (416)
T PRK09440 278 ----SLAPGRLGP----AIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRY--------LPDEPCLIHKP-----E 336 (416)
T ss_pred ----ccCCCcHHH----HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cccCCeEEecC-----C
Confidence 011111222 222233321 100000112333344445555555442 11 2444433 2
Q ss_pred ccEEE-EEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCC
Q 037063 473 GPSLA-FNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTN 551 (588)
Q Consensus 473 g~iv~-f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t 551 (588)
++... +.+.+. .++...+.+.+.++||.++.|..+.++.... ...+..+||+|++. +
T Consensus 337 gg~fiw~~~~~~---~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~-----------------~~~~~~~iRis~~~--~ 394 (416)
T PRK09440 337 GAIFLWLWFKDL---PITTEELYQRLKARGVLVVPGHYFFPGLDED-----------------WPHAHQCIRMNYVQ--D 394 (416)
T ss_pred CceEEEEECCCC---CCCHHHHHHHHHHCCEEEechHhhCCCCccc-----------------cCCcCceEEEEecC--C
Confidence 33333 334321 1345667777888999999885432110000 00012389999873 7
Q ss_pred HHHHHHHHHHHHHhhhh
Q 037063 552 FEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 552 ~eDv~~li~~l~~~l~~ 568 (588)
.++++.+++.|+++++.
T Consensus 395 ~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 395 DEEIEKGIAILAEEVEK 411 (416)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999988765
No 253
>PLN02672 methionine S-methyltransferase
Probab=99.70 E-value=2.9e-14 Score=164.95 Aligned_cols=303 Identities=14% Similarity=0.104 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHhCCCCCC-ceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDD-YTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e-~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
+..+.+++++++..|++.+. ..|++|+|+++++.+++.++ .++||+|++....+..+ ...++..|++++.+|.+
T Consensus 734 dlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aL-l~pGD~VLVp~PtY~~Y----~~~a~~~Ga~vv~Vpl~ 808 (1082)
T PLN02672 734 DPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCC-VQEGGTLCFPAGSNGTY----VSAAKFLKANFRRIPTK 808 (1082)
T ss_pred HHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHH-cCCCCEEEEeCCChHHH----HHHHHHcCCEEEEEecc
Confidence 45678999999998987642 36999999999999999999 89999988766544322 34567789999999986
Q ss_pred C-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCC-CCCCccCCHHHH----HHHHHcCcEEEEeCCCc-CCCCCCC-
Q 037063 258 W-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQS-KVTGARYSYMWM----SVAAEKGWHVLLDATAL-GSKDMDT- 329 (588)
Q Consensus 258 ~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~s-n~tG~~~pl~~I----~~a~~~g~~vvvDaa~~-~~~d~~~- 329 (588)
. .+..+|.++|++++.. .++++++++.++ ||||..++.+++ ++|+++|++||+|.+.. +-.+-..
T Consensus 809 ~e~gf~lD~d~Le~al~~-------~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~ 881 (1082)
T PLN02672 809 SSDGFKLTAKTLASTLET-------VKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGW 881 (1082)
T ss_pred cccCCCCCHHHHHHHhcc-------CCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCC
Confidence 3 2467888999999861 134578888886 999999998875 67889999999999853 1111000
Q ss_pred --CCCC----CC----C--CcEEEeccCccCCCCCCceEEEEEeCc-chhcccCCCCCCCceEeeecCCCcccccccccc
Q 037063 330 --LGLS----LF----K--PDFLICSFYKIFGENPSGFGCLFVKKS-SASVLSGSTSSVSTIMGIEPSFSEIIELETLDE 396 (588)
Q Consensus 330 --l~l~----~~----~--~D~vv~S~~K~~G~~P~G~G~L~v~~~-~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~ 396 (588)
..+. .. + .-+++.|+.|.++.+...+|+++..++ +++.+.....-. +
T Consensus 882 s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s-~------------------- 941 (1082)
T PLN02672 882 GGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLS-R------------------- 941 (1082)
T ss_pred cccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhc-C-------------------
Confidence 0110 00 0 125677999988765566999999765 666654321000 0
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHH-Hh-----CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCC
Q 037063 397 SSQSKFPESSISGVSSKLVECKGLDHAD-AL-----GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMF 470 (588)
Q Consensus 397 ~~f~e~GT~~~~~~~~~~al~~aL~~l~-~~-----G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~ 470 (588)
. .+... .++..++..+. +- .+....+.++..++++.+.|.++ +++++.|
T Consensus 942 -----~--~~~~q----~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~----------Gi~v~~P---- 996 (1082)
T PLN02672 942 -----P--HSTLK----YTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC----------GWDVLEP---- 996 (1082)
T ss_pred -----C--CcHHH----HHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCeEecC----
Confidence 0 00011 11122222111 00 13455556677778888888874 2444433
Q ss_pred CcccEEEEEee-cC----------C---CCCcCHHHHH-HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCC
Q 037063 471 DRGPSLAFNVF-DW----------N---GTRIDPALVQ-KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNET 535 (588)
Q Consensus 471 ~rg~iv~f~~~-~~----------~---g~~i~~~~v~-~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~ 535 (588)
.|+++.+.-. .. + +..++...+. .++++.||.+.+|..+.
T Consensus 997 -eGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG------------------------ 1051 (1082)
T PLN02672 997 -QGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTG------------------------ 1051 (1082)
T ss_pred -CcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccC------------------------
Confidence 3555554321 10 0 0123455554 55566799999884320
Q ss_pred cCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 536 RSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 536 ~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
.. +++|++++. +.+++++.++.|++|++
T Consensus 1052 ~~--g~~RIsfa~--~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1052 IP--GYCRFSFAL--EDSEFDRALKAIARFKE 1079 (1082)
T ss_pred CC--CeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 02 289999984 78899999999999875
No 254
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.70 E-value=8.3e-15 Score=157.20 Aligned_cols=334 Identities=9% Similarity=0.074 Sum_probs=206.0
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|||..+. |.-.+.+++++.+.+......+ ... ..+..++
T Consensus 29 dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~---------------------------~~~----~~~~~~~ 77 (400)
T PTZ00125 29 EGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTS---------------------------RAF----YNDVLGL 77 (400)
T ss_pred CCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccccc---------------------------ccc----cCHHHHH
Confidence 57789998753 3357788888866653211100 000 0346788
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--------C-CCCCeEE-EcCCCchhHHHHHHHHHHhcCC----
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--------F-YSNPRLL-TVYDHENEAAALMIESSKKRGA---- 249 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--------~-~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~---- 249 (588)
+++.++++++.+ .++|++++|+|+..++.... + ..+++|+ ....+|......+ ........
T Consensus 78 ~~~~l~~~~~~~----~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~-~~~~~~~~~~~~ 152 (400)
T PTZ00125 78 AEKYITDLFGYD----KVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGAC-SASTDPKCYNNF 152 (400)
T ss_pred HHHHHHhCCCCC----EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHH-hhcCCcchhccC
Confidence 999999988762 48999999999887777541 1 1234554 6667776333322 11110000
Q ss_pred -----EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeC
Q 037063 250 -----RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDA 319 (588)
Q Consensus 250 -----~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDa 319 (588)
.+..++. .|+++|++.+.. +++++|++..++|++|.+.| +++| ++|+++|+++|+|.
T Consensus 153 ~~~~~~~~~~~~------~d~~~le~~l~~-------~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~De 219 (400)
T PTZ00125 153 GPFVPGFELVDY------NDVEALEKLLQD-------PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDE 219 (400)
T ss_pred CCCCCCceEeCC------CCHHHHHHHhCC-------CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1111111 278899988851 57899999999999999998 8899 99999999999999
Q ss_pred CCc-CCCCCC--CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccc
Q 037063 320 TAL-GSKDMD--TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDE 396 (588)
Q Consensus 320 a~~-~~~d~~--~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~ 396 (588)
++. ++..-. ........+|++++| |.++.+..++|++++++++++.+.....+ .+
T Consensus 220 v~~g~g~~G~~~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~~~~~~~~~~~~~--~t------------------ 277 (400)
T PTZ00125 220 IQTGLGRTGKLLAHDHEGVKPDIVLLG--KALSGGLYPISAVLANDDVMLVIKPGEHG--ST------------------ 277 (400)
T ss_pred cccCCCccchhhHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcHHHHhhccCCCCC--CC------------------
Confidence 964 321100 111222348988765 97763223689999999887766543211 00
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE
Q 037063 397 SSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL 476 (588)
Q Consensus 397 ~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv 476 (588)
| .++ ++. .++..++|+.+.+.+ +.++.+.+.+++++.|.++... .+.+.... ..|.++
T Consensus 278 --~--~~~-~~~----~~aa~~~l~~i~~~~---~~~~~~~~~~~l~~~l~~l~~~-----~~~~~~~~-----~~g~~~ 335 (400)
T PTZ00125 278 --Y--GGN-PLA----CAVAVEALEVLKEEK---LAENAQRLGEVFRDGLKELLKK-----SPWVKEIR-----GKGLLN 335 (400)
T ss_pred --C--CcC-HHH----HHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhc-----CCCeEEEe-----cccEEE
Confidence 0 111 111 144456777776533 4566667777777777764110 12222111 245666
Q ss_pred EEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHH
Q 037063 477 AFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTY 556 (588)
Q Consensus 477 ~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~ 556 (588)
.+.+...++ .....+.+.|.++||.+.++. ...||+++++..+.+||+
T Consensus 336 ~v~~~~~~~--~~~~~~~~~l~~~Gv~v~~~~------------------------------~~~lRi~~~~~~~~~~i~ 383 (400)
T PTZ00125 336 AIVFDHSDG--VNAWDLCLKLKENGLLAKPTH------------------------------DNIIRFAPPLVITKEQLD 383 (400)
T ss_pred EEEEccCcc--hHHHHHHHHHHHCCeEEeecC------------------------------CCEEEEECCccCCHHHHH
Confidence 666643211 234556666667899886431 128999999999999999
Q ss_pred HHHHHHHHhhhh
Q 037063 557 RLWAFVSRFLDA 568 (588)
Q Consensus 557 ~li~~l~~~l~~ 568 (588)
++++.|.+++++
T Consensus 384 ~~l~~l~~~l~~ 395 (400)
T PTZ00125 384 QALEIIKKVLKS 395 (400)
T ss_pred HHHHHHHHHHHH
Confidence 999999998865
No 255
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.69 E-value=6.1e-15 Score=148.70 Aligned_cols=304 Identities=16% Similarity=0.152 Sum_probs=198.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEec-CHHHHHHHHHHhCCCCCCCe--EEEcCCCch-hHHHHHHHHHHhcCCE--E
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTA-NQSSAFKLLAESYPFYSNPR--LLTVYDHEN-EAAALMIESSKKRGAR--V 251 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~-g~T~al~lv~~s~~~~~gd~--ll~~~e~~s-~~~~~~~~~a~~~G~~--v 251 (588)
..+++++++.+.++++++ ++|.|.|.+ |+|..+.++..++ +..... +.+ .+.+ .+..| |++.+.. +
T Consensus 49 ~~v~~~a~~~lreLl~iP-d~Y~VlflqGGat~qf~~~p~nL-l~~~~~~yv~~--g~Ws~~a~~e----A~~~~~~~~~ 120 (365)
T COG1932 49 KNVLEEAEKDLRELLNIP-DDYKVLFLQGGATGQFAMAPMNL-LGKRGTDYVDT--GAWSEFAIKE----AKKVGKQPKL 120 (365)
T ss_pred HHHHHHHHHHHHHHhCCC-CCceEEEEcCccHHHHHHHHHhh-hcccCceeEee--eehhHhHHHH----HHHhcccccc
Confidence 678899999999999995 679999986 5588999999888 544332 332 2222 13333 3444432 2
Q ss_pred EEEecc-CCCCcc-CHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCH-HHHHHHHHcCcEEEEeCCCcCCCCCC
Q 037063 252 SSAEFA-WPNLRI-HSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSY-MWMSVAAEKGWHVLLDATALGSKDMD 328 (588)
Q Consensus 252 ~~v~~~-~~~~~i-~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl-~~I~~a~~~g~~vvvDaa~~~~~d~~ 328 (588)
..+... .+.+.+ +++.+. +. ++...|.+++..+.+|+.+|- .++ .. +.++++|+++.+. ..
T Consensus 121 ~~~~~~~~~~~~iP~~~~~~--~~--------~~~ayv~~~~NeTi~Gv~v~~~p~~--~~--~~~~v~D~SS~il--sr 184 (365)
T COG1932 121 IDARIEEAGYGSIPDLSKWD--FS--------DNDAYVHFCWNETISGVEVPELPDI--GS--DGLLVADASSAIL--SR 184 (365)
T ss_pred cccceeccCccCCCChhhcc--cC--------CCccEEEEecCCcccceEccCCCCC--CC--CceEEEecccHHh--cC
Confidence 221111 012222 222211 22 346679999999999999982 122 11 1789999998775 45
Q ss_pred CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc
Q 037063 329 TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS 408 (588)
Q Consensus 329 ~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~ 408 (588)
++|+++ .|++.++.+|-+| |.|++++++|++++++++..... .+... ... .+ ...|.|.+
T Consensus 185 ~iDvsk--~dviyagaQKnlG--paGltvvIvr~~~l~r~~~~~~P--~if~y------------~~~-~~-~~s~yNTP 244 (365)
T COG1932 185 PIDVSK--YDVIYAGAQKNLG--PAGLTVVIVRPDLLERAESYTLP--SIFDY------------LTH-AD-NGSMYNTP 244 (365)
T ss_pred CCChhH--cceEEEehhhccC--ccceEEEEEcHHHHhcccccCCc--hHhhc------------hhh-hc-cCCccCCc
Confidence 667665 7899999999999 89999999999999888655211 11000 000 12 23344444
Q ss_pred chhhHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc-cEEEEEeecCCCC
Q 037063 409 GVSSKLVECKGLDHADALG-LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG-PSLAFNVFDWNGT 486 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~~~G-~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg-~iv~f~~~~~~g~ 486 (588)
....++.+...++++.+.| ++.+.+|.+.-++.|++.+.+- +..+-.- .+..|+ -.|+|.+.+.+
T Consensus 245 ptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s---------~fy~~~v--~~~~RS~mnV~f~~~~~~-- 311 (365)
T COG1932 245 PTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS---------DFYRNLV--AKANRSRMNVTFTLVDAE-- 311 (365)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC---------Ccccccc--chhhccceeEEEEcCcHH--
Confidence 4433477778999998875 9999999999999999999873 2222111 113454 57778877533
Q ss_pred CcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 487 RIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 487 ~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
++.. +.+.+++.|...-.|.- ..| .+|+|++-.-..|||+.|+++++.|.
T Consensus 312 -ld~~-fv~eae~~gl~~lkGhr--------------------------~vg--GmRasiynA~~~e~veaL~~fm~~f~ 361 (365)
T COG1932 312 -LDKG-FVAEAEAAGLIYLKGHR--------------------------SVG--GLRASIYNAVPLEDVEALTDFMDWFE 361 (365)
T ss_pred -HHHH-HHHHHHHcCCceecccc--------------------------CCC--ceeeeeecCCCHHHHHHHHHHHHHHH
Confidence 4433 44556666776555511 133 69999999899999999999999986
Q ss_pred hh
Q 037063 567 DA 568 (588)
Q Consensus 567 ~~ 568 (588)
+.
T Consensus 362 ~~ 363 (365)
T COG1932 362 ET 363 (365)
T ss_pred Hh
Confidence 54
No 256
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.69 E-value=3.7e-15 Score=160.41 Aligned_cols=302 Identities=14% Similarity=0.064 Sum_probs=175.0
Q ss_pred HHHHHHHHHHh------CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCE-----
Q 037063 182 SKIRKRIMDFM------NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGAR----- 250 (588)
Q Consensus 182 ~~~r~~ia~~l------ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~----- 250 (588)
.++|+.|++++ ++++++ |++|+|+++++.++. .+ +.+||+|++....+... ...++..|++
T Consensus 79 ~~LR~aia~~~~~~~g~~~~~~~--I~it~Ga~~al~~l~-~~-~~~gd~V~v~~P~Y~~~----~~~~~~~g~~~~~~~ 150 (409)
T PRK07590 79 DFLREKIAENDYQARGCDISADE--IFISDGAKCDTGNIL-DI-FGPDNTIAVTDPVYPVY----VDTNVMAGRTGEANE 150 (409)
T ss_pred HHHHHHHHHHHHHhcCCcCChhh--EEECCCHHHHHHHHH-Hh-cCCCCEEEEeCCCCcch----HHHHHHcCCcccccc
Confidence 36777777765 566654 999999999999875 45 67999977654443312 3455667876
Q ss_pred ------EEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCC
Q 037063 251 ------VSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDAT 320 (588)
Q Consensus 251 ------v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa 320 (588)
++.++++ +++.+..+ +. .+++++|+++.++||||..++.+++ ++|+++|+++|+|.+
T Consensus 151 ~~~~~~~~~v~~~-~~~~~~~d-----~~-------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~ 217 (409)
T PRK07590 151 DGRYSGIVYLPCT-AENNFVPE-----LP-------EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAA 217 (409)
T ss_pred cccccceeEeecc-cccCCccc-----Cc-------ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEcc
Confidence 8888876 22222221 11 1578999999999999999998874 668899999999997
Q ss_pred Cc--CC--CCCCCC-CCCCC-CCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 321 AL--GS--KDMDTL-GLSLF-KPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 321 ~~--~~--~d~~~l-~l~~~-~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
.. .. ....++ .+... ..-+++.||.|.+|.+..++|++++.+++++.+.....- .... .+...
T Consensus 218 Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~--~~~~---------~~~~~ 286 (409)
T PRK07590 218 YEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGV--SLNS---------LWNRR 286 (409)
T ss_pred chhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCHHHhhhccccchh--hhHH---------HHHHH
Confidence 32 11 001111 11111 123667899999986466799999988776532110000 0000 00000
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDH-ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG 473 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~-l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg 473 (588)
. .....+.+.+.+ .++..+++. .... ++++.++.++.++++.+.|.++ +++++.| ..+
T Consensus 287 ~--~~~~~~~s~~~q----~a~~~~l~~~~~~~-~~~~~~~~~~~r~~l~~~L~~~----------~~~~~~~----~g~ 345 (409)
T PRK07590 287 Q--STKFNGVSYIVQ----RAAEAVYSPEGKAQ-IKELIDYYMENAKIIREGLESA----------GFEVYGG----VNA 345 (409)
T ss_pred H--hhcccCcCHHHH----HHHHHHhcCCcHHH-HHHHHHHHHHHHHHHHHHHHhc----------CCceecC----Ccc
Confidence 0 000011111222 222233321 0111 3445566666677788888763 2444433 123
Q ss_pred cEEEEEeecCCCCCcCHHHH-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCH
Q 037063 474 PSLAFNVFDWNGTRIDPALV-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNF 552 (588)
Q Consensus 474 ~iv~f~~~~~~g~~i~~~~v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~ 552 (588)
..+-+.+.+. ++...+ .+++++.||.+.+|..+. . .+.+++|+++ ..+.
T Consensus 346 ~f~wi~~~~~----~~~~~~~~~l~~~~gv~v~pg~~f~----------------~--------~~~~~iRi~~--~~~~ 395 (409)
T PRK07590 346 PYIWVKTPDG----MSSWDFFDKLLQEANVVGTPGSGFG----------------P--------SGEGYFRLSA--FGSR 395 (409)
T ss_pred eEEEEECCCC----CCHHHHHHHHHHHCCEEEeChhHhC----------------C--------CCCCEEEEEc--cCCH
Confidence 3444444431 344444 456678899998874321 0 2223899995 4578
Q ss_pred HHHHHHHHHHHHhh
Q 037063 553 EDTYRLWAFVSRFL 566 (588)
Q Consensus 553 eDv~~li~~l~~~l 566 (588)
++++..++.|++.|
T Consensus 396 ~~l~~~l~rl~~~~ 409 (409)
T PRK07590 396 ENVLEAMERIKKAL 409 (409)
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999887653
No 257
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.69 E-value=9.9e-15 Score=152.57 Aligned_cols=304 Identities=16% Similarity=0.153 Sum_probs=193.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCC-CchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYD-HENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e-~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+.+.++++.+-|.. ..+.++++..|+..+..++ +++||+|+...+ |.. .+..+..+.++.|+++.+++.
T Consensus 62 nPT~~~lE~~~a~LEg~~----~~~afsSGmaAI~~~~l~l-l~~GD~vl~~~~~YG~-t~~~~~~~l~~~gi~~~~~d~ 135 (396)
T COG0626 62 NPTRDALEEALAELEGGE----DAFAFSSGMAAISTALLAL-LKAGDHVLLPDDLYGG-TYRLFEKILQKFGVEVTFVDP 135 (396)
T ss_pred CccHHHHHHHHHHhhCCC----cEEEecCcHHHHHHHHHHh-cCCCCEEEecCCccch-HHHHHHHHHHhcCeEEEEECC
Confidence 334557888888888773 2777788889999988899 999999776555 544 555667778889999998875
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
. +.+++++++.. ++|++|.+..++||+-.+.|+..| ++|+++|+.++||.+-+.|....+|.+.
T Consensus 136 ~------~~~~~~~~~~~-------~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~G-- 200 (396)
T COG0626 136 G------DDEALEAAIKE-------PNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQRPLELG-- 200 (396)
T ss_pred C------ChHHHHHHhcc-------cCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccChhhcC--
Confidence 3 44566766651 589999999999999999999999 9999999999999998888555666532
Q ss_pred CCcEEEeccCccCCCCCCc-eEEEEEeCcch-hcccCCC---CCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 336 KPDFLICSFYKIFGENPSG-FGCLFVKKSSA-SVLSGST---SSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G-~G~L~v~~~~~-~~l~~~~---~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
+|+++-|..|.+|.+--= .|.++.+++.+ +.+.... .| +..+ ++-+
T Consensus 201 -aDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G--~~l~-------------------------p~dA- 251 (396)
T COG0626 201 -ADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTG--AVLS-------------------------PFDA- 251 (396)
T ss_pred -CCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcC--CCCC-------------------------HHHH-
Confidence 999999999988721111 45444455443 3331111 11 1110 1111
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCC------------CCCcccEEEE
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKV------------MFDRGPSLAF 478 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~------------~~~rg~iv~f 478 (588)
.-+.++|+-+.-. |++..+....+++||.+ || ...+||-|.- ....|++++|
T Consensus 252 ---~l~lRGlkTL~~R-m~~~~~nA~~IA~~L~~------~p------~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf 315 (396)
T COG0626 252 ---WLLLRGLRTLALR-MERHNENALKIAEFLAD------HP------KVKKVYYPGLPSHPGHELAKRQMTGYGGLFSF 315 (396)
T ss_pred ---HHHHhccchHHHH-HHHHHHHHHHHHHHHhc------CC------CeEEEECCCCCCCCcHHHHHHhcCCCceEEEE
Confidence 1233555544322 45555555556665554 21 2335666531 1126789999
Q ss_pred EeecCCCCCcCHHHHHHHHHhCCcEe---cccccc----Cccc-ccchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCC
Q 037063 479 NVFDWNGTRIDPALVQKLADRHNISL---SCGFLQ----NIFF-SGEYEQERVRVLETRSGTNETRSGV--SVVTAALGC 548 (588)
Q Consensus 479 ~~~~~~g~~i~~~~v~~~l~~~gI~v---~~G~~c----~~~~-~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~ 548 (588)
.+.+ .+.+.++++.-.+.. +-|..- +|.. ...... ..... ..|+ +.||+|.|.
T Consensus 316 ~l~~-------~~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~---~~~r~-------~~Gi~~~LvRlSVGl 378 (396)
T COG0626 316 ELKN-------EEAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIP---LEERA-------KAGITDGLVRLSVGL 378 (396)
T ss_pred EeCC-------hHHHHHHHHhCCccEEeccCCCcccccccccccCcccCC---HhHHH-------hcCCCCCeEEEEecC
Confidence 9986 155667776655432 333211 1100 000000 00001 1333 399999997
Q ss_pred CCCHHHHHHHHHHHHHhhhh
Q 037063 549 LTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 549 ~~t~eDv~~li~~l~~~l~~ 568 (588)
||++.|++-|++.|+.
T Consensus 379 ----Ed~eDLi~Dl~~Al~~ 394 (396)
T COG0626 379 ----EDVEDLIADLEQALAK 394 (396)
T ss_pred ----CCHHHHHHHHHHHHHh
Confidence 8888899888887764
No 258
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.68 E-value=1.7e-14 Score=144.99 Aligned_cols=311 Identities=14% Similarity=0.056 Sum_probs=202.7
Q ss_pred HHHHHHHHHHhCCCCC----CceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 182 SKIRKRIMDFMNISED----DYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~----e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
..+|+.||++++-+.+ ..+|++|+|+++|+.++++++ -+||.+||.+...+. .+ ...|...|.+|+..++-
T Consensus 106 ~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~L-A~p~aNILlPrPGfp-~Y---~~~a~~~~lEVR~ydlL 180 (447)
T KOG0259|consen 106 LPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSL-ANPGANILLPRPGFP-LY---DTRAIYSGLEVRYYDLL 180 (447)
T ss_pred HHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHh-cCCCCceecCCCCCc-hH---HHhhhhcCceeEeeccc
Confidence 4899999999774321 134999999999999999999 799999887766543 22 34567789999999874
Q ss_pred -CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCC--CcC--C---C
Q 037063 258 -WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDAT--ALG--S---K 325 (588)
Q Consensus 258 -~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa--~~~--~---~ 325 (588)
..+++||.+.++.+++ ++|..+++.+++||+|..++.+ +| +.|+++|+.||-|.. +.+ + +
T Consensus 181 Pe~~weIDL~~veal~D--------ENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfv 252 (447)
T KOG0259|consen 181 PEKDWEIDLDGVEALAD--------ENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFV 252 (447)
T ss_pred CcccceechHHHHHhhc--------cCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCcc
Confidence 2567899999999999 8999999999999999999855 46 789999999999987 222 1 1
Q ss_pred CCCCCCCCCCCCcEEEeccCc-cCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 326 DMDTLGLSLFKPDFLICSFYK-IFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 326 d~~~l~l~~~~~D~vv~S~~K-~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
.|..+ +..-|-+...+..| |+=. .-++|++.+.+..- .++....- .+.... ++. -.|-
T Consensus 253 pmg~f--ssiVPVitlggisKrW~VP-GWRlGWi~~hD~~g-vf~~~~~~-q~~~~~---------~~~-------~~~p 311 (447)
T KOG0259|consen 253 PMGKF--SSIVPVITLGGISKRWIVP-GWRLGWIALHDPRG-VFRDTKVV-QGIKNF---------LDI-------IPGP 311 (447)
T ss_pred chhhc--cccCceEeecccccccccC-CceeeeEEEecccc-cccchHHH-HHHHHH---------Hhc-------cCCc
Confidence 13333 22225566678899 7652 45799999887431 11111100 011000 000 1111
Q ss_pred CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE-EEe--e
Q 037063 405 SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA-FNV--F 481 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~-f~~--~ 481 (588)
..+.+ +|+..-|+--.+.=.+....-++..++..++.|++ +|.+..+-. +.|.+.. +.+ .
T Consensus 312 ~TiiQ----~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~---------IP~l~cp~k----Peg~mylmv~l~~s 374 (447)
T KOG0259|consen 312 ATIIQ----GALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKD---------IPCLTCPVK----PEGCMYLMVKLNLS 374 (447)
T ss_pred cHhHH----HHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhc---------CCCcccCcC----CCcceEEEeccchh
Confidence 11111 22222222221111455666667778888999998 466653221 2233222 221 1
Q ss_pred cCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCcc-EEEEecCCCCCHHHHHHHHH
Q 037063 482 DWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVS-VVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 482 ~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~-~vRvSlg~~~t~eDv~~li~ 560 (588)
--..-.-+.+..++++++..+.+-+|.. .|.+ ++|++++. ..+.++...+
T Consensus 375 ~~~~~~dD~dFc~kL~~Eesv~~LPG~a---------------------------f~~~nw~Ri~i~~--~~~~leea~~ 425 (447)
T KOG0259|consen 375 LFPDIEDDVDFCQKLAREESVICLPGQA---------------------------FGLKNWLRIVITV--EEEMLEEAFS 425 (447)
T ss_pred hhccccccHHHHHHHhhhcceEEecccc---------------------------ccCCCeEEEEEcc--ChHHHHHHHH
Confidence 0000112456688999999999888732 3333 99999775 6789999999
Q ss_pred HHHHhhhhhhcc
Q 037063 561 FVSRFLDADFVE 572 (588)
Q Consensus 561 ~l~~~l~~~~~~ 572 (588)
.|+.|.+..+.+
T Consensus 426 Rik~Fc~RH~~~ 437 (447)
T KOG0259|consen 426 RIKEFCDRHSKE 437 (447)
T ss_pred HHHHHHHhhhhc
Confidence 999999998844
No 259
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.68 E-value=4.6e-14 Score=153.92 Aligned_cols=151 Identities=14% Similarity=0.072 Sum_probs=108.9
Q ss_pred eEEEecCHHHHHHHHHHh-----CCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCC-C-----CccCHHHH
Q 037063 200 TLVFTANQSSAFKLLAES-----YPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWP-N-----LRIHSGKL 268 (588)
Q Consensus 200 ~vvft~g~T~al~lv~~s-----~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~-~-----~~i~~e~l 268 (588)
+|++|.|+++|+.+++.+ + +.|||+|++....+..+. .+..+ ...|++++.++.+.. . +.++.+++
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~l-l~pGD~Vlv~~P~y~~y~-~~~~l-~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l 233 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANEL-LKKGDKIALMTPIFTPYL-EIPEL-PRYDFEVVRIKADEMTEDGTHTWQYPDKEL 233 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhc-CCCCCEEEEeCCCcHHHH-HHHHH-hcCCcEEEEeecccccccccccCCCCHHHH
Confidence 699999999999998877 5 789999876655543222 21122 234788888887522 1 56899999
Q ss_pred HHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHc--CcEEEEeCCCc--CCCCCCCCCCCCCC-CcE
Q 037063 269 MKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEK--GWHVLLDATAL--GSKDMDTLGLSLFK-PDF 339 (588)
Q Consensus 269 ~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~--g~~vvvDaa~~--~~~d~~~l~l~~~~-~D~ 339 (588)
+++++ +++++|++..++||||..++.++ | ++|+++ +++||+|.+-. .. +..++ ++..+ --+
T Consensus 234 ~~~~~--------~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~-~~~sl-~~~~~~~vI 303 (521)
T TIGR03801 234 EKLRD--------PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD-DFRSL-FAELPYNTI 303 (521)
T ss_pred HHhcC--------CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc-cccch-hhhCCCCEE
Confidence 98776 78999999999999999999665 4 668876 99999999832 22 11111 11111 247
Q ss_pred EEeccCccCCCCCCceEEEEEeCc
Q 037063 340 LICSFYKIFGENPSGFGCLFVKKS 363 (588)
Q Consensus 340 vv~S~~K~~G~~P~G~G~L~v~~~ 363 (588)
++.|+.|.||++...+|++++.++
T Consensus 304 ~v~SfSK~fg~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 304 GVYSFSKYFGATGWRLGTIALHKD 327 (521)
T ss_pred EEEcchhhccCchhhhhhhhcCch
Confidence 888999999865566999999865
No 260
>PRK08354 putative aminotransferase; Provisional
Probab=99.66 E-value=2.1e-13 Score=141.39 Aligned_cols=149 Identities=13% Similarity=0.142 Sum_probs=110.2
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNL 261 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~ 261 (588)
..+|+.+++++|. + |++|+|+++|+.+++..+ .+||+|++....+. .....++..|++++.++
T Consensus 43 ~~l~~~ia~~~~~---~--I~vt~G~~~al~~~~~~~--~~gd~vlv~~P~y~----~~~~~~~~~g~~~~~~~------ 105 (311)
T PRK08354 43 EWLEEEFSKLFGE---P--IVITAGITEALYLIGILA--LRDRKVIIPRHTYG----EYERVARFFAARIIKGP------ 105 (311)
T ss_pred HHHHHHHHHHHCC---C--EEECCCHHHHHHHHHHhh--CCCCeEEEeCCCcH----HHHHHHHHcCCEEeecC------
Confidence 4688999999984 3 999999999999888654 48999876655443 22456677899997653
Q ss_pred ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCcC-CCCCCCCCCCCCC
Q 037063 262 RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATALG-SKDMDTLGLSLFK 336 (588)
Q Consensus 262 ~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~~-~~d~~~l~l~~~~ 336 (588)
++.+.|++.++ ++++++++.++||||..++.+++ +.|+++|+++|+|.+-.- ..+-.... ..
T Consensus 106 -~d~~~l~~~~~---------~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~---~~ 172 (311)
T PRK08354 106 -NDPEKLEELVE---------RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPE---GE 172 (311)
T ss_pred -CCHHHHHHhhc---------CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccC---CC
Confidence 46778877765 36789999999999999998775 567889999999998422 11111111 22
Q ss_pred CcEEEeccCccCCCCCCceEEEEE
Q 037063 337 PDFLICSFYKIFGENPSGFGCLFV 360 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G~G~L~v 360 (588)
--+++.|+.|.||++..++|+++.
T Consensus 173 ~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 173 NIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred cEEEEeccHhhcCCccceeeeeee
Confidence 457889999999864566899987
No 261
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.66 E-value=3.4e-14 Score=162.06 Aligned_cols=305 Identities=16% Similarity=0.114 Sum_probs=206.4
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCC--CeEE-EcCCCchhHHHHHHHHHHhcCCEEEEE
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSN--PRLL-TVYDHENEAAALMIESSKKRGARVSSA 254 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~g--d~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v 254 (588)
-+.+-+.+..|+++.|.+..+ .-+..++|++.++++.++..+.+ ++|+ ....||. ...-++..++..|.+|+.+
T Consensus 108 Le~l~e~Qt~i~eLtGm~~aN--aSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~-~~~v~~t~a~~~g~~v~~~ 184 (939)
T TIGR00461 108 LEALLNFQTVVSDLTGLPVAN--ASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQ-TKSVLHTRAKPFGIEVIVV 184 (939)
T ss_pred HHHHHHHHHHHHHHHCCChhh--hhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcc-hHHHHHHHHHhcCcEEEEE
Confidence 566778999999999998655 77888999988888877644333 5665 5666766 3434466778899999987
Q ss_pred eccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC---CCCCCC
Q 037063 255 EFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS---KDMDTL 330 (588)
Q Consensus 255 ~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~---~d~~~l 330 (588)
+. ++|+..+ ++..++ ....|..|.+.++++| +++|++|.++++++-...- +...++
T Consensus 185 ~~---------~~l~~~~----------~~~~v~-~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~ 244 (939)
T TIGR00461 185 DC---------SDIKKAV----------DVFGCL-LQYPATDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHY 244 (939)
T ss_pred cH---------HHHhhcC----------CEEEEE-EECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHc
Confidence 43 3444332 244443 4455789999999999 9999999999997653331 234455
Q ss_pred CCCCCCCcEEEeccCccC---CCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcc-ccccccc-ccccccCCCC
Q 037063 331 GLSLFKPDFLICSFYKIF---GENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEI-IELETLD-ESSQSKFPES 405 (588)
Q Consensus 331 ~l~~~~~D~vv~S~~K~~---G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~-~~~~~~~-~~~f~e~GT~ 405 (588)
| +|+++.+.++|- |++..+.|++.+++++...++....| .+.+. ...+.+ ..++.+. +-|. |-+|.
T Consensus 245 G-----aDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG--~s~D~-~G~~~~~l~LqtReqhIrR-ekAtS 315 (939)
T TIGR00461 245 G-----ADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVG--VSKDA-LGNTALRLALQTREQHIRR-DKATS 315 (939)
T ss_pred C-----CcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCcee--EEecC-CCCccceeecccccccccc-cccCc
Confidence 5 999988888731 12234599999999988888776655 12111 000000 1122222 1255 78899
Q ss_pred CccchhhHHHHHHH--HHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecC
Q 037063 406 SISGVSSKLVECKG--LDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDW 483 (588)
Q Consensus 406 ~~~~~~~~~al~~a--L~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~ 483 (588)
|+.....+.++.++ +.++-..|+.+|.+|+..++.+|.++|.++ ++++..+. --..+.+.+..
T Consensus 316 NICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~----------G~~~~~~~----fF~~~~v~~~~- 380 (939)
T TIGR00461 316 NICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND----------PHELINKT----WFDTLTVKVGN- 380 (939)
T ss_pred chhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC----------CCcccCCC----ccceEEEEeCC-
Confidence 98876444444445 344555579999999999999999999884 45554431 11234444422
Q ss_pred CCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 484 NGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 484 ~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
.+.+.+.+.|.++||.++.. ..+ .|++|++-++|.+||+.|++.+.
T Consensus 381 ----~~~~~i~~~~~~~gi~l~~~----------------------------~~~--~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 381 ----GISSELLKAAEEFNINLRAV----------------------------DTT--TVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred ----CCHHHHHHHHHHCCCeeeec----------------------------CCC--EEEEEeecCCCHHHHHHHHHHhc
Confidence 23677878888899997642 012 79999999999999999999985
No 262
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.66 E-value=5.7e-15 Score=154.95 Aligned_cols=301 Identities=14% Similarity=0.080 Sum_probs=181.0
Q ss_pred CCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCch--hHHHHHHHHHHHHHhCCC
Q 037063 118 IGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEE--SELESKIRKRIMDFMNIS 195 (588)
Q Consensus 118 a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~--~~~~~~~r~~ia~~lga~ 195 (588)
++-...|+.+++.+...+.... -.+.+. ...|++.+ .+++.-+.++++++||++
T Consensus 27 aSEN~~Sp~v~~al~S~l~nky-----------------------aeg~pg-~ryy~G~~~id~iE~la~~ra~~lF~~~ 82 (399)
T PF00464_consen 27 ASENYMSPAVREALGSDLTNKY-----------------------AEGYPG-KRYYGGCEYIDEIEELAIERAKELFGAE 82 (399)
T ss_dssp TT-----HHHHHHHTSGGGGS------------------------TTEETT-EESSSSTHHHHHHHHHHHHHHHHHHT-S
T ss_pred CcccccCHHHHHHhCCcceeec-----------------------cccCCC-cccccCcchhhHHHHHHHHHHHHHhCCC
Confidence 6677888899888754442211 111222 22344432 677778999999999998
Q ss_pred CCCce-EEEecCHHHHHHHHHHhCCCCCCCeEEE-cC---CCchhHHHHHHHH----HHhcCCEEEEEeccCCCCccCHH
Q 037063 196 EDDYT-LVFTANQSSAFKLLAESYPFYSNPRLLT-VY---DHENEAAALMIES----SKKRGARVSSAEFAWPNLRIHSG 266 (588)
Q Consensus 196 ~~e~~-vvft~g~T~al~lv~~s~~~~~gd~ll~-~~---e~~s~~~~~~~~~----a~~~G~~v~~v~~~~~~~~i~~e 266 (588)
++++- -|=.-|++.|...+..++ ++|||+|+. +. .|-+ +...... +.....++...++++.++.||.+
T Consensus 83 ~~~w~anvqp~SGs~An~av~~aL-l~pGD~Im~l~l~~GGHls--hg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d 159 (399)
T PF00464_consen 83 PKEWYANVQPHSGSQANLAVYMAL-LKPGDTIMGLSLPHGGHLS--HGSSVNFKKISASGLYFESVPYPVDPDTGLIDYD 159 (399)
T ss_dssp TTTEEEE---SSHHHHHHHHHHHH-T-TT-EEEEEEGGGT--GG--GT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HH
T ss_pred cccceEEeecCCchHHHHHHHHHH-HhhcCcEEecChhhccccc--ccccccccccccccceEEEEeeeeecCCCeECHH
Confidence 76643 344458889999999999 899999763 22 2221 1111111 11234678888888788999999
Q ss_pred HHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC-----CCCCCCCCCCCCCcEE
Q 037063 267 KLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS-----KDMDTLGLSLFKPDFL 340 (588)
Q Consensus 267 ~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~-----~d~~~l~l~~~~~D~v 340 (588)
++++.+.+ .+++||++...+ .-..+|++++ ++|++.|+++++|++|.++ .-..++. .+|++
T Consensus 160 ~l~~~a~~-------~kPklIi~G~S~--y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~----~ADvv 226 (399)
T PF00464_consen 160 ELEKLAKE-------HKPKLIICGASS--YPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFP----YADVV 226 (399)
T ss_dssp HHHHHHHH-------H--SEEEEE-SS--TSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCC----TSSEE
T ss_pred HHHHHHhh-------cCCCEEEECchh--ccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccc----cceEE
Confidence 99999984 578999998655 4466889999 9999999999999998775 2235554 28999
Q ss_pred EeccCc-cCCCCCCceEEEEEeCcc--------------hhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 341 ICSFYK-IFGENPSGFGCLFVKKSS--------------ASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 341 v~S~~K-~~G~~P~G~G~L~v~~~~--------------~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
.+|.|| +.| |.| |+++.++.. .+++....+.+ -.|.+
T Consensus 227 t~sThKtl~G--Prg-giI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~-------------------------~qg~~ 278 (399)
T PF00464_consen 227 TGSTHKTLRG--PRG-GIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPG-------------------------LQGGP 278 (399)
T ss_dssp EEESSGGG-S--SS--EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTT-------------------------T-SS-
T ss_pred Eeeccccccc--cCc-eEEEEcCCccccCCcccccHHHHHHHhccccCCC-------------------------cccCc
Confidence 999999 566 876 888888432 22222111110 12233
Q ss_pred CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCC
Q 037063 406 SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNG 485 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g 485 (588)
.... ++++..+|..+.+.......+++...++.|.+.|.+. +++|.+.. .....|.+.+....
T Consensus 279 h~~~---iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~----------G~~v~~gg---Td~H~vlvd~~~~~- 341 (399)
T PF00464_consen 279 HMHR---IAALAVALKEALSPEFKEYAKQVVKNAKALAEALQER----------GFKVVTGG---TDNHQVLVDLRSFG- 341 (399)
T ss_dssp -HHH---HHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT----------T-EEGGGS----SSSEEEEEGGGGT-
T ss_pred chhH---HHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhC----------CcEEEECC---CCCCeEEEEecccc-
Confidence 3333 3677777776544335778888889999999999884 57776532 34577777775422
Q ss_pred CCcCHHHHHHHHHhCCcEec
Q 037063 486 TRIDPALVQKLADRHNISLS 505 (588)
Q Consensus 486 ~~i~~~~v~~~l~~~gI~v~ 505 (588)
++...+.+.|++.||.+-
T Consensus 342 --~~g~~a~~~Le~~gI~vn 359 (399)
T PF00464_consen 342 --IDGKEAEKALEEAGIIVN 359 (399)
T ss_dssp --S-HHHHHHHHHHTTEE-E
T ss_pred --cchHHHHHHHHhcCeeec
Confidence 678889999999999874
No 263
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.66 E-value=6.5e-14 Score=150.16 Aligned_cols=317 Identities=14% Similarity=0.077 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCC-
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWP- 259 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~- 259 (588)
..++|+.|++++|.+ .+++|.|+|+|+.+++.++ .+|||+|+. ..|.. .. .......|++++.++++..
T Consensus 55 ~~~Leeaia~~~g~~----~vv~t~~Gt~Al~la~~al-~~pGD~V~~-~~~f~-~~---~~~i~~~Ga~pv~v~i~~~~ 124 (431)
T cd00617 55 FYDLEDAVQDLFGFK----HIIPTHQGRGAENILFSIL-LKPGRTVPS-NMHFD-TT---RGHIEANGAVPVDLVIDEAH 124 (431)
T ss_pred HHHHHHHHHHHHCCC----eEEEcCCHHHHHHHHHHHh-CCCCCEEcc-CCccc-ch---HHHHHhCCCEeEEEeccccc
Confidence 358999999999984 3999999999999999998 899998753 33332 11 2233567999999998632
Q ss_pred --------CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCC-CccCCHHH---H-HHHHHcCcEEEEeCCCcCC--
Q 037063 260 --------NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVT-GARYSYMW---M-SVAAEKGWHVLLDATALGS-- 324 (588)
Q Consensus 260 --------~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~t-G~~~pl~~---I-~~a~~~g~~vvvDaa~~~~-- 324 (588)
.+.+|+++|+++|++ ....++++|+++.++|++ |..++++. | ++|+++|++||.|++++..
T Consensus 125 ~~~~~~pf~gniD~e~Le~~I~~----~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na 200 (431)
T cd00617 125 DAQELIPFKGNIDVAKLEKLIDE----VGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENA 200 (431)
T ss_pred ccccccCCCCCcCHHHHHHHhCc----ccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhh
Confidence 245999999999982 112458999999999998 99998764 5 8899999999999996541
Q ss_pred ---------CCCCCCC---CC-CCCCcEEEeccCccCCCCCCceEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccc
Q 037063 325 ---------KDMDTLG---LS-LFKPDFLICSFYKIFGENPSGFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIE 390 (588)
Q Consensus 325 ---------~d~~~l~---l~-~~~~D~vv~S~~K~~G~~P~G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~ 390 (588)
..-.++. .. ..-.|.+.+|++|-++. |. .|+++.++ +++++++.......+
T Consensus 201 ~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~-~~-GG~i~~~d~~l~~~~~~~~~~~~~------------- 265 (431)
T cd00617 201 YFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLV-NI-GGFLALRDDELYEEARQRVVLYEG------------- 265 (431)
T ss_pred hhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCC-cc-ceEEEeCcHHHHHHHHHhccccCC-------------
Confidence 0001110 00 01279999999995553 54 36888887 477766532110000
Q ss_pred cccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCC
Q 037063 391 LETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMF 470 (588)
Q Consensus 391 ~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~ 470 (588)
|-..|..+... ++++..||+.... .+.+.+++. .+++|.+.|.+. |+ .+..|
T Consensus 266 --------~~~~gG~~~r~---~~A~A~gL~e~~~--~~~l~~~~~-~r~~l~~~L~~~-------G~---~v~~P---- 317 (431)
T cd00617 266 --------FVTYGGMAGRD---MEALAQGLREAVE--EDYLRHRVE-QVRYLGDRLDEA-------GV---PIVEP---- 317 (431)
T ss_pred --------ccccccccHHH---HHHHHHHHHhccc--HHHHHHHHH-HHHHHHHHHHHC-------CC---CccCC----
Confidence 00112222222 2444446654211 234444444 348888888875 33 34333
Q ss_pred CcccEEEEEeecC----CCCCcCHHH-HHHHHHhCCcEe-ccccccCcccccchHHHHHHHHhhhcCCCCC-cCCccEEE
Q 037063 471 DRGPSLAFNVFDW----NGTRIDPAL-VQKLADRHNISL-SCGFLQNIFFSGEYEQERVRVLETRSGTNET-RSGVSVVT 543 (588)
Q Consensus 471 ~rg~iv~f~~~~~----~g~~i~~~~-v~~~l~~~gI~v-~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~-~~g~~~vR 543 (588)
..+..+-+.+... .++..+... ..+++.+.||.+ -.|.+..+...+. +.. ......||
T Consensus 318 ~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~---------------~~~~~~~~~~~r 382 (431)
T cd00617 318 AGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNT---------------GENKYPELELVR 382 (431)
T ss_pred CcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCC---------------CcccCCccceeE
Confidence 2233444444321 111123433 458889999984 4454322110000 000 01124899
Q ss_pred EecC-CCCCHHHHHHHHHHHHHhhhhh
Q 037063 544 AALG-CLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 544 vSlg-~~~t~eDv~~li~~l~~~l~~~ 569 (588)
+.+. ..-|.++++.+++.|.+.++.-
T Consensus 383 l~~prr~~t~~~~~~~~~~~~~~~~~~ 409 (431)
T cd00617 383 LAIPRRVYTQDHMDYVAAAVIALYERR 409 (431)
T ss_pred EeccccccCHHHHHHHHHHHHHHHhhH
Confidence 9985 2347899999999999987664
No 264
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.66 E-value=2.6e-14 Score=153.54 Aligned_cols=290 Identities=12% Similarity=0.083 Sum_probs=181.5
Q ss_pred HHHHHHHHHhC------CCCCCceEE--EecCHHHHHHHHHH---hCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEE
Q 037063 183 KIRKRIMDFMN------ISEDDYTLV--FTANQSSAFKLLAE---SYPFYSNPRLLTVYDHENEAAALMIESSKKRGARV 251 (588)
Q Consensus 183 ~~r~~ia~~lg------a~~~e~~vv--ft~g~T~al~lv~~---s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v 251 (588)
++|+.|++++. ++++ +|+ .|.|+++|+.++.. .+ +++||+|++....+. .....++..|+++
T Consensus 76 ~lR~aia~~~~~~~~~~~~~~--~v~~~~t~G~~~al~~~~~~l~~~-~~~Gd~Vlv~~P~y~----~~~~~~~~~G~~~ 148 (404)
T PTZ00376 76 SFIEAAQKLLFGEASYALAEK--RIATVQALSGTGALRLGFEFLKRF-LPAGTTVYVSNPTWP----NHVNIFKSAGLNV 148 (404)
T ss_pred HHHHHHHHHhcCCCccccccC--eEEEeeccCcchHHHHHHHHHHHh-cCCCCEEEEcCCCch----hHHHHHHHcCCce
Confidence 77888888652 3444 477 48999999988764 56 789999876665543 2245667889999
Q ss_pred EEEeccC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCC--cCC
Q 037063 252 SSAEFAW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATA--LGS 324 (588)
Q Consensus 252 ~~v~~~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~--~~~ 324 (588)
+.++... .+..+|.+.+++.+.+ . .+++++++++.++||||..++.+++ ++|+++|+++|+|.+- +..
T Consensus 149 ~~v~l~~~~~~~~d~~~l~~~~~~----~-~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~ 223 (404)
T PTZ00376 149 KEYRYYDPKTKGLDFDGMLEDLRT----A-PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFAS 223 (404)
T ss_pred eeccccCcccCCcCHHHHHHHHHh----C-CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccC
Confidence 9999832 3467899999998861 1 1457889999999999999998874 6788999999999982 221
Q ss_pred CC----CCCC-CCCCCC-CcEEEeccCccCCCCCCceEEEE---EeCcchhccc----CCCCCCCceEeeecCCCccccc
Q 037063 325 KD----MDTL-GLSLFK-PDFLICSFYKIFGENPSGFGCLF---VKKSSASVLS----GSTSSVSTIMGIEPSFSEIIEL 391 (588)
Q Consensus 325 ~d----~~~l-~l~~~~-~D~vv~S~~K~~G~~P~G~G~L~---v~~~~~~~l~----~~~~g~~g~v~~~~~~~~~~~~ 391 (588)
-. ...+ .+.... --+++.||.|.||.+..++|+++ .+++.++.+. ......
T Consensus 224 ~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~---------------- 287 (404)
T PTZ00376 224 GDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPM---------------- 287 (404)
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhh----------------
Confidence 00 0000 111111 23788899999995456799984 3444333221 111000
Q ss_pred ccccccccccCCCCCccchhhHHHHHHHHHHH---HHh--CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC-eEEEeC
Q 037063 392 ETLDESSQSKFPESSISGVSSKLVECKGLDHA---DAL--GLILISNRARYLINWLANALMNLHHPHSETGIP-LVRIYG 465 (588)
Q Consensus 392 ~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l---~~~--G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~-~v~i~~ 465 (588)
..+.+.+.+ .++..+|+.- +.. -+..+.++.++.++++.+.|.++ +.+ .+.++.
T Consensus 288 ---------~~~~~~~~q----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-------~~~~~~~~~~ 347 (404)
T PTZ00376 288 ---------YSSPPIHGA----RIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKAL-------GSPGDWEHII 347 (404)
T ss_pred ---------cCCCchHHH----HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCCcccccc
Confidence 000111111 2222333211 110 03445567778888888888875 122 233322
Q ss_pred CCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEe
Q 037063 466 PKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAA 545 (588)
Q Consensus 466 p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvS 545 (588)
..|++..+. . ++.+.+.+++++.||.+.+| . |||
T Consensus 348 -----p~gg~f~~~--~-----~~~~~~~~L~~~~~v~v~p~---------------------------------~-Ris 381 (404)
T PTZ00376 348 -----NQIGMFSFT--G-----LTKEQVERLIEKYHIYLLDN---------------------------------G-RIS 381 (404)
T ss_pred -----cCceEEEec--C-----CCHHHHHHHHHhCCEeecCC---------------------------------C-eEE
Confidence 245554442 2 33566677888889987532 2 899
Q ss_pred cCCCCCHHHHHHHHHHHHHhhh
Q 037063 546 LGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 546 lg~~~t~eDv~~li~~l~~~l~ 567 (588)
++. -+.++++++++.|++++.
T Consensus 382 ~~~-~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 382 VAG-LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred Eec-cCHHhHHHHHHHHHHHHh
Confidence 863 478999999999999875
No 265
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.65 E-value=6.2e-14 Score=149.90 Aligned_cols=331 Identities=13% Similarity=0.109 Sum_probs=198.7
Q ss_pred CCCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
.++..|+|..+ .|.-.+.+.+++.+.+.. .... .+. + ..+...
T Consensus 28 ~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~-~~~~----------------------~~~-----~---~~~~~~ 76 (389)
T PRK01278 28 EDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEK-LWHV----------------------SNL-----Y---RIPEQE 76 (389)
T ss_pred CCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHh-cCcc----------------------ccc-----c---CChHHH
Confidence 36788999866 467677888887666532 1100 000 0 023455
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhC---CCCCCC----eEE-EcCCCchhHHHHHHHHHHhcCCEEEE-
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESY---PFYSNP----RLL-TVYDHENEAAALMIESSKKRGARVSS- 253 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~---~~~~gd----~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~- 253 (588)
++.++++++.+. + .|+|++|+++|+..++... ...+|+ +|+ ....||.....++ . ..|.....
T Consensus 77 ~la~~l~~~~~~--~--~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~-~---~~~~~~~~~ 148 (389)
T PRK01278 77 RLAERLVENSFA--D--KVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATI-A---AGGQEKYLE 148 (389)
T ss_pred HHHHHHHhhCCC--C--EEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHH-h---ccCChhhcc
Confidence 777888887643 2 4999999999999886654 234555 555 5666776333332 1 11221111
Q ss_pred --EeccCCCC----ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCcc-CC---HHHH-HHHHHcCcEEEEeCCCc
Q 037063 254 --AEFAWPNL----RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGAR-YS---YMWM-SVAAEKGWHVLLDATAL 322 (588)
Q Consensus 254 --v~~~~~~~----~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~-~p---l~~I-~~a~~~g~~vvvDaa~~ 322 (588)
.+.. ++. ..|++++++.++ +++++|++..+++++|.. +| +++| ++|+++|+++|+|.++.
T Consensus 149 ~~~~~~-~~~~~~~~~d~~~l~~~l~--------~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~ 219 (389)
T PRK01278 149 GFGPLV-PGFDQVPFGDIEALKAAIT--------PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC 219 (389)
T ss_pred cCCCCC-CCceEeCCCCHHHHHHhhC--------CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 0110 111 147889999887 679999999999999944 44 5557 89999999999999865
Q ss_pred C-CCCCC--CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccccccc
Q 037063 323 G-SKDMD--TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQ 399 (588)
Q Consensus 323 ~-~~d~~--~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f 399 (588)
. +..-. ........+|+ .++.|.++. ...+|+++.+++.++.+.....+ .
T Consensus 220 g~g~~g~~~~~~~~~~~pdi--~t~sK~l~~-G~~ig~~~~~~~~~~~~~~~~~~--~---------------------- 272 (389)
T PRK01278 220 GMGRTGKLFAHEWAGVTPDI--MAVAKGIGG-GFPLGACLATEEAAKGMTPGTHG--S---------------------- 272 (389)
T ss_pred CCCcCCcceeecccCCCCCE--EEEehhccC-CcceEEEEEcHHHHhccCCCCCC--C----------------------
Confidence 2 21101 11111223775 467897772 23499999998877655432211 0
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC-eEEEeCCCCCCCcccEEEE
Q 037063 400 SKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIP-LVRIYGPKVMFDRGPSLAF 478 (588)
Q Consensus 400 ~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~-~v~i~~p~~~~~rg~iv~f 478 (588)
..+ .+... .++..++|+.+++ +...++.+.+.+++.++|+.+... .+ .+... ...|.++.+
T Consensus 273 -t~~-~~~~~---~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~l~~~-----~~~~~~~v-----~g~G~~~~i 334 (389)
T PRK01278 273 -TYG-GNPLA---MAVGNAVLDVILA---PGFLDNVQRMGLYLKQKLEGLVDR-----FPDVIEEV-----RGKGLLLGL 334 (389)
T ss_pred -CCC-ccHHH---HHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhh-----CCCceeeE-----ecccEEEEE
Confidence 001 11111 1344466776644 345667777777777777765211 12 11111 123455555
Q ss_pred EeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHH
Q 037063 479 NVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRL 558 (588)
Q Consensus 479 ~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~l 558 (588)
.+.. +...+.+.|.++||.+.++. ...||+++.+..+.+||+++
T Consensus 335 ~~~~------~~~~~~~~l~~~GV~~~p~~------------------------------~~~lR~~p~~~~~~~~i~~~ 378 (389)
T PRK01278 335 KCVV------PNRDLVQALRDEGLLTVGAG------------------------------DNVVRLLPPLIITEEEIDEA 378 (389)
T ss_pred EEec------CHHHHHHHHHHCCeEEeecC------------------------------CCEEEEeCCcccCHHHHHHH
Confidence 4432 24566666666799876541 12899999988999999999
Q ss_pred HHHHHHhhhh
Q 037063 559 WAFVSRFLDA 568 (588)
Q Consensus 559 i~~l~~~l~~ 568 (588)
++.|++++++
T Consensus 379 l~~l~~~l~~ 388 (389)
T PRK01278 379 LERLERAAES 388 (389)
T ss_pred HHHHHHHHHh
Confidence 9999988754
No 266
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.64 E-value=4.3e-14 Score=154.36 Aligned_cols=150 Identities=13% Similarity=0.142 Sum_probs=107.3
Q ss_pred ceEEEecCHHHHHHHHHHh-----CCCCCCCeEEEcCCCchhHHHHHHHHHHhc--CCEEEEEeccC-CCCccCHHHHHH
Q 037063 199 YTLVFTANQSSAFKLLAES-----YPFYSNPRLLTVYDHENEAAALMIESSKKR--GARVSSAEFAW-PNLRIHSGKLMK 270 (588)
Q Consensus 199 ~~vvft~g~T~al~lv~~s-----~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~--G~~v~~v~~~~-~~~~i~~e~l~~ 270 (588)
.+|++|+|+++|+..++.+ + +++||+|++....+..+ ...++.. |++++.++.+. .+..++.++|++
T Consensus 162 ~~I~vT~Ga~~al~~~~~aL~~~~l-l~pGD~Vlv~~P~y~~Y----~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~ 236 (527)
T PRK09275 162 FDLFAVEGGTAAMCYIFDSLKENGL-LKAGDKIALMTPIFTPY----LEIPELPRYDLEVVHINADEENEWQYPDSELEK 236 (527)
T ss_pred CeEEEeCCHHHHHHHHHHHHhhhhc-CCCCCEEEEeCCChHHH----HHHHHHcCCCeEEEEeecCcccCCCCCHHHHHh
Confidence 4699999999999988876 5 89999988766655422 2233334 55666666542 236789999998
Q ss_pred HHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHH--cCcEEEEeCCC--cCCCCCCCCCCCCC-CCcEEE
Q 037063 271 KIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAE--KGWHVLLDATA--LGSKDMDTLGLSLF-KPDFLI 341 (588)
Q Consensus 271 ~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~--~g~~vvvDaa~--~~~~d~~~l~l~~~-~~D~vv 341 (588)
+++ +++++|++..++||||..++.++ | ++|++ ++++||+|.+- +.+ ...++ ++.. .--+++
T Consensus 237 ~~~--------~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~-~~~s~-~~~~~~~~I~v 306 (527)
T PRK09275 237 LRD--------PSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD-DFRSL-FAVLPYNTILV 306 (527)
T ss_pred hcC--------CCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc-cccCH-HHhCCCCEEEE
Confidence 887 78999999999999999999666 4 66754 59999999982 222 11111 0111 134788
Q ss_pred eccCccCCCCCCceEEEEEeCc
Q 037063 342 CSFYKIFGENPSGFGCLFVKKS 363 (588)
Q Consensus 342 ~S~~K~~G~~P~G~G~L~v~~~ 363 (588)
.|+.|.||++.-++|+++.+++
T Consensus 307 ~SfSK~f~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 307 YSFSKYFGATGWRLGVIALHED 328 (527)
T ss_pred eehhhhccCcHhHHhhhhcCch
Confidence 8999999864556899999886
No 267
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.64 E-value=9.2e-14 Score=148.84 Aligned_cols=292 Identities=13% Similarity=0.126 Sum_probs=177.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCC-------CeEE-EcCCCchhHHHHHHHHHHhcCC
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSN-------PRLL-TVYDHENEAAALMIESSKKRGA 249 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~g-------d~ll-~~~e~~s~~~~~~~~~a~~~G~ 249 (588)
.+...++.++++++.+. + .++||+|+++|+.+++... ...+ ++++ ....||...... .. ..+.
T Consensus 80 ~~~~~~la~~l~~~~~~--~--~v~~~~gg~eA~~~al~~a-~~~~~~~~~~~~~ii~~~~~yhg~~~~~-~~---~~~~ 150 (396)
T PRK02627 80 IEPQEELAEKLVELSGM--D--KVFFCNSGAEANEAAIKLA-RKYGHKKGIEKPEIITAENSFHGRTLAT-LS---ATGQ 150 (396)
T ss_pred CHHHHHHHHHHHhhcCC--C--EEEECCCcHHHHHHHHHHH-HHHhcccCCCCCeEEEECCCcCcccHHH-HH---hcCC
Confidence 35566888888888765 3 4999999999999988854 2211 4554 455555311111 11 1121
Q ss_pred EEE---EEeccCCCC----ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCc-cCC---HHHH-HHHHHcCcEEEE
Q 037063 250 RVS---SAEFAWPNL----RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGA-RYS---YMWM-SVAAEKGWHVLL 317 (588)
Q Consensus 250 ~v~---~v~~~~~~~----~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~-~~p---l~~I-~~a~~~g~~vvv 317 (588)
... ..+.. ++. ..|.+++++++. +++++|++..++|++|. .+| +++| ++|+++|+++|+
T Consensus 151 ~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~--------~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~ 221 (396)
T PRK02627 151 PKYQEGFEPLV-EGFIYVPFNDIEALKAAIT--------DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLIL 221 (396)
T ss_pred ccccccCCCCC-CCceEeCCCCHHHHHHhcC--------CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 111 11111 100 117889998886 68999999999999994 444 5667 899999999999
Q ss_pred eCCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 318 DATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 318 Daa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
|.++. ++.. ...+......+|++ ++.|.+|. ...+|++++++++++.+...... .
T Consensus 222 DE~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~~~~-G~rig~~~~~~~~~~~~~~~~~~--~----------------- 279 (396)
T PRK02627 222 DEVQTGMGRTGKLFAYQHYGIEPDIM--TLAKGLGG-GVPIGAVLAKEKVADVFTPGDHG--S----------------- 279 (396)
T ss_pred echhcCCCccCceeeehhcCCCCCEE--EEcchhhC-CcccEEEEEcHHHHhccCCCCCC--C-----------------
Confidence 99965 2211 11111112237754 57798873 45699999998877666432211 0
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
..+. +... .++..++|+.+.. +.+.++.+.+.+++.+.|.++... .+.+... ...|.
T Consensus 280 ------t~~~-~~~~---~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~-----~~~g~ 336 (396)
T PRK02627 280 ------TFGG-NPLA---CAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEK-----YPGIKEV-----RGLGL 336 (396)
T ss_pred ------CCCC-CHHH---HHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHh-----CCCeeee-----ccCcE
Confidence 0011 1111 1344456665544 345667777777777777664210 1222111 12355
Q ss_pred EEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHH
Q 037063 475 SLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFED 554 (588)
Q Consensus 475 iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eD 554 (588)
++.+.+ + .+...+.+.+.++||.+.++. . .+||+++++..+.+|
T Consensus 337 ~~~i~~-~-----~~~~~~~~~l~~~Gv~v~~~~----------------------------~--~~lRi~~~~~~~~~~ 380 (396)
T PRK02627 337 MIGIEL-D-----RPAAEIVKKALEKGLLINVTG----------------------------D--NVLRLLPPLIISKEE 380 (396)
T ss_pred EEEEEe-c-----CcHHHHHHHHHHCCeEEeecC----------------------------C--CEEEEECCcccCHHH
Confidence 666665 2 235566666666799987541 1 279999998999999
Q ss_pred HHHHHHHHHHhhhh
Q 037063 555 TYRLWAFVSRFLDA 568 (588)
Q Consensus 555 v~~li~~l~~~l~~ 568 (588)
++++++.|+++++.
T Consensus 381 i~~~~~~l~~~l~~ 394 (396)
T PRK02627 381 IDEAVDRLEEVLKE 394 (396)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998753
No 268
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.64 E-value=5e-14 Score=150.98 Aligned_cols=291 Identities=14% Similarity=0.118 Sum_probs=179.0
Q ss_pred HHHHHHHHHhC------CCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 183 KIRKRIMDFMN------ISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 183 ~~r~~ia~~lg------a~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
++|+.|++++. +++++-.|++|+|+++|+.+++..+. +++||+|++....+..+ ...++..|++++.++
T Consensus 73 ~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~----~~~~~~~g~~~v~v~ 148 (396)
T PRK09257 73 AYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNH----RAIFEAAGLEVKTYP 148 (396)
T ss_pred HHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccH----HHHHHHcCCcEEEEe
Confidence 67777777752 23433123999999999999987653 47999987766554322 445677899999999
Q ss_pred c-cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCc-CCCC---
Q 037063 256 F-AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATAL-GSKD--- 326 (588)
Q Consensus 256 ~-~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~-~~~d--- 326 (588)
. +.+++.++.+++++.+.. ..+++.+++++.++||||..++.+++ ++|+++|+++|+|.+-. +..+
T Consensus 149 ~~~~~~~~~d~~~l~~~~~~-----~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~ 223 (396)
T PRK09257 149 YYDAATKGLDFDAMLADLSQ-----APAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEE 223 (396)
T ss_pred ccccccCccCHHHHHHHHHh-----CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHH
Confidence 7 323467999999998862 11346888889999999999998874 67889999999999822 1111
Q ss_pred -CCCC-CCC-CCCCcEEEeccCccCCCCCCceEEEEE--eC-cch----hcccCCCCCCCceEeeecCCCcccccccccc
Q 037063 327 -MDTL-GLS-LFKPDFLICSFYKIFGENPSGFGCLFV--KK-SSA----SVLSGSTSSVSTIMGIEPSFSEIIELETLDE 396 (588)
Q Consensus 327 -~~~l-~l~-~~~~D~vv~S~~K~~G~~P~G~G~L~v--~~-~~~----~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~ 396 (588)
...+ .+. ....-+++.||.|.||.+..++|++++ .. +.+ ..+.......
T Consensus 224 ~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 282 (396)
T PRK09257 224 DAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTN--------------------- 282 (396)
T ss_pred HHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhh---------------------
Confidence 0010 001 111237788999999843456899884 22 222 2221111000
Q ss_pred cccccCCCCCccchhhHHHHHHHHHH------HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC-eEEEeCCCCC
Q 037063 397 SSQSKFPESSISGVSSKLVECKGLDH------ADALGLILISNRARYLINWLANALMNLHHPHSETGIP-LVRIYGPKVM 469 (588)
Q Consensus 397 ~~f~e~GT~~~~~~~~~~al~~aL~~------l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~-~v~i~~p~~~ 469 (588)
..+.+.+.+ .++...|.. +++. ++++.++.++.++.+.+.|.++ +.+ .+.+..
T Consensus 283 ----~~~~~~~~q----~~~~~~l~~~~~~~~~~~~-~~~~r~~~~~rr~~l~~~L~~~-------~~~~~~~~~~---- 342 (396)
T PRK09257 283 ----YSNPPAHGA----AIVATILNDPELRAEWEAE-LEEMRERIKAMRQLLVEALKAK-------GPSRDFDFIA---- 342 (396)
T ss_pred ----cCCCcHHHH----HHHHHHhCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhc-------CCCCCccccc----
Confidence 000111111 122222221 1111 4556777777888888888875 111 243332
Q ss_pred CCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC
Q 037063 470 FDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL 549 (588)
Q Consensus 470 ~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~ 549 (588)
..|++..+. . ++.+.+.+++.+.||.+.+ . . |++++.
T Consensus 343 -p~gg~~~w~--~-----l~~~~~~~l~~~~~V~~~p------------------------------~---~-ri~~~~- 379 (396)
T PRK09257 343 -RQRGMFSYS--G-----LTPEQVDRLREEFGVYAVG------------------------------S---G-RINVAG- 379 (396)
T ss_pred -ccceEEEec--C-----CCHHHHHHHHHcCCEEEcC------------------------------C---C-eEEEee-
Confidence 235544332 2 3456778888999997642 1 2 888753
Q ss_pred CCHHHHHHHHHHHHHhh
Q 037063 550 TNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 550 ~t~eDv~~li~~l~~~l 566 (588)
-+.++|+.+++.|++.|
T Consensus 380 ~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 380 LNESNIDYVAEAIAAVL 396 (396)
T ss_pred CCHHHHHHHHHHHHhhC
Confidence 47899999999988653
No 269
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.64 E-value=3.9e-14 Score=146.28 Aligned_cols=168 Identities=15% Similarity=0.116 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCC
Q 037063 180 LESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWP 259 (588)
Q Consensus 180 ~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~ 259 (588)
....+.+.|+++-|+. + ++..+++..|+..+...+ ..+|++++...+-+......+.++..+.|+++.+++.+
T Consensus 78 t~~~le~~iaal~ga~---~-~l~fsSGmaA~~~al~~L-~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~-- 150 (409)
T KOG0053|consen 78 TRDVLESGIAALEGAA---H-ALLFSSGMAAITVALLHL-LPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD-- 150 (409)
T ss_pred chHHHHHHHHHHhCCc---e-EEEecccHHHHHHHHHHh-cCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh--
Confidence 3457888999999985 2 556666666667777777 68899976433433446667788888999999998875
Q ss_pred CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCc
Q 037063 260 NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPD 338 (588)
Q Consensus 260 ~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D 338 (588)
+.+++++.+. +++++|.+..++||+....|+++| ++||++|+.|+||.+-..|...+++.+. +|
T Consensus 151 ----~~~~~~~~i~--------~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lG---AD 215 (409)
T KOG0053|consen 151 ----DLKKILKAIK--------ENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPLPLG---AD 215 (409)
T ss_pred ----hHHHHHHhhc--------cCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccccChhhcC---CC
Confidence 5678888887 789999999999999999999999 9999999999999997777555555432 99
Q ss_pred EEEeccCccCCCCC-CceEEEEEe-Ccchhccc
Q 037063 339 FLICSFYKIFGENP-SGFGCLFVK-KSSASVLS 369 (588)
Q Consensus 339 ~vv~S~~K~~G~~P-~G~G~L~v~-~~~~~~l~ 369 (588)
+++-|..|++|.+- .=.|.+.++ .+..++++
T Consensus 216 IV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~ 248 (409)
T KOG0053|consen 216 IVVHSATKYIGGHSDVIGGSVVLNSEELASRLK 248 (409)
T ss_pred EEEEeeeeeecCCcceeeeEEecCcHHHHHHHH
Confidence 99999999888211 115666665 34444443
No 270
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.64 E-value=6.9e-14 Score=149.71 Aligned_cols=322 Identities=13% Similarity=0.098 Sum_probs=191.8
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHH-HHHHHHHHhCCCC--CCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEE
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQS-SAFKLLAESYPFY--SNPRLL-TVYDHENEAAALMIESSKKRGARVSS 253 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T-~al~lv~~s~~~~--~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~ 253 (588)
..+..++.+.+++++|++.- ...++++++| .++.+++.++..+ +|++|+ ....|.+ . .+.+...|+++++
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~-~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S-~----~kAi~~~G~~pv~ 177 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSI-KSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKS-C----IKAISTAGFEPRV 177 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCC-CEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHH-H----HHHHHHcCCeEEE
Confidence 67888999999999999643 2488889999 6888888887643 578866 4445443 3 3445667999999
Q ss_pred Eec--cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCC-CCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC-CCC
Q 037063 254 AEF--AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQS-KVTGARYSYMWM-SVAAEKGWHVLLDATALGSK-DMD 328 (588)
Q Consensus 254 v~~--~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~s-n~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~-d~~ 328 (588)
++. +.+++.+|+++|+++|+. ...++.++++..++ ...|...|+++| ++|+++|+++|+|+|+.... ...
T Consensus 178 Vd~~~d~~~~~iD~e~Le~aIt~-----~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~ 252 (444)
T TIGR03531 178 IETVLDGDELTTDVEDIERAIEE-----IGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYM 252 (444)
T ss_pred eeeeecCcCCCcCHHHHHHHHHh-----ccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhh
Confidence 994 446788999999999982 01145555555443 445689999999 99999999999999977641 111
Q ss_pred CC---CCCCCCCcEEEeccCccCCCCCCceEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 329 TL---GLSLFKPDFLICSFYKIFGENPSGFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 329 ~l---~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
.+ +...-++|++++|+||++.. |.+.|++++++ ++++.+...+.+. ..++
T Consensus 253 ~~~~~g~~~Grad~vv~s~hK~l~~-pg~Gg~I~~~d~el~~~i~~~y~g~-------------------------~~~s 306 (444)
T TIGR03531 253 ELINKAIKVGRVDAVVSSTDKNFMV-PVGGAIIYSFDENFIQEISKSYPGR-------------------------ASAS 306 (444)
T ss_pred hhhhccccccCCCeEEEeCccCCCC-CCCEEEEEECCHHHHHHHHHhccCC-------------------------CCCh
Confidence 11 11111379999999998875 77777777854 4545554433221 0000
Q ss_pred CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeC-CCCCCCcccEEEEEeecC
Q 037063 405 SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYG-PKVMFDRGPSLAFNVFDW 483 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~-p~~~~~rg~iv~f~~~~~ 483 (588)
+ . ..+...+..+..-|++++.++..++++++.+.|.++.-.. +.+++. |.. +- -+++.+...
T Consensus 307 ~---~----~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~------~~~~~~~~~n--~i--s~~~~~~~~ 369 (444)
T TIGR03531 307 P---S----LDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERH------GERLLDTPEN--PI--SSAMTLSTL 369 (444)
T ss_pred H---H----HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------CcEeecCCCC--ce--eEEEecccc
Confidence 0 0 1111222222223577788888889999999998863221 234432 211 11 122333321
Q ss_pred CCCCcCHHHHHHHHHhCCcE----eccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHH
Q 037063 484 NGTRIDPALVQKLADRHNIS----LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLW 559 (588)
Q Consensus 484 ~g~~i~~~~v~~~l~~~gI~----v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li 559 (588)
.+ -+...+-..|-..+|. |..|..-..+.... ..+.. .....-.+++.+....-.+.+|||.|+
T Consensus 370 ~~--~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~~------~~~~~----~~~~~~~~y~~~~~~~g~~~~~~~~~~ 437 (444)
T TIGR03531 370 KG--KDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCEF------KGYGS----HTSNYPCPYITAAAAIGMTKEDVDTFV 437 (444)
T ss_pred cc--cCHHHHHHHHHhCCCCCceeecCCCceEECCEEe------ecccc----cccCCCchhHHHHHHhCCcHHHHHHHH
Confidence 11 2356666666666663 22221000000000 00000 000011236777766777999999999
Q ss_pred HHHHHh
Q 037063 560 AFVSRF 565 (588)
Q Consensus 560 ~~l~~~ 565 (588)
+.|.+.
T Consensus 438 ~~l~~~ 443 (444)
T TIGR03531 438 SRLEKS 443 (444)
T ss_pred HHHhhc
Confidence 997764
No 271
>PRK08637 hypothetical protein; Provisional
Probab=99.63 E-value=1.5e-13 Score=146.96 Aligned_cols=172 Identities=12% Similarity=0.048 Sum_probs=115.2
Q ss_pred HHHHHHHHHHhC-----CCCCC-ceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 182 SKIRKRIMDFMN-----ISEDD-YTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 182 ~~~r~~ia~~lg-----a~~~e-~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++|+.+++++. .++++ .+|++|+|+++++.+++..+ .++||+|++....+.+... .++...|++++.++
T Consensus 47 ~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~~~~---~~~~~~g~~vv~v~ 122 (388)
T PRK08637 47 PELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLF-VDQGDTVLLPDHNWGNYKL---TFNTRRGAEIVTYP 122 (388)
T ss_pred HHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHh-cCCCCEEEEcCCCCccHHH---HHHHhcCCEEEEec
Confidence 367777777652 33221 35899999999999999998 7999998776655442321 12234799999999
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHH-----cCcEEEEeCCCc--C-
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAE-----KGWHVLLDATAL--G- 323 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~-----~g~~vvvDaa~~--~- 323 (588)
...+++.++.+++++.++ ....+.+.+++++.++||||..++.+++ ++|++ +++++|+|.+-. .
T Consensus 123 ~~~~~~~~d~~~l~~~~~----~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~ 198 (388)
T PRK08637 123 IFDEDGGFDTDALKEALQ----AAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFY 198 (388)
T ss_pred ccCCCCcCCHHHHHHHHH----hhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhccc
Confidence 832445689999998876 1112456789999999999999998875 44554 899999999832 1
Q ss_pred -CCCCCCC--CC-CCC-CCc-EEEeccCccCCCCCCceEEEEEe
Q 037063 324 -SKDMDTL--GL-SLF-KPD-FLICSFYKIFGENPSGFGCLFVK 361 (588)
Q Consensus 324 -~~d~~~l--~l-~~~-~~D-~vv~S~~K~~G~~P~G~G~L~v~ 361 (588)
+....++ .+ +.. ++- +++.|+.|.|+.+...+|++++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~ 242 (388)
T PRK08637 199 EDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFG 242 (388)
T ss_pred CCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEc
Confidence 1111111 01 111 121 22349999777555679999875
No 272
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.63 E-value=1.2e-14 Score=153.16 Aligned_cols=280 Identities=13% Similarity=0.075 Sum_probs=178.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
...+.++++..|+.+|++ .+...|.|+|.++..++.++ .++||+|+++...|-+.+..+ ...|+++++++..
T Consensus 65 ~G~I~eAe~~aA~~fGAd---~t~flvnGsT~g~~a~i~a~-~~~gd~VLv~RN~HkSv~~al----il~ga~Pvyi~p~ 136 (417)
T PF01276_consen 65 EGIIKEAEELAARAFGAD---KTFFLVNGSTSGNQAMIMAL-CRPGDKVLVDRNCHKSVYNAL----ILSGAIPVYIPPE 136 (417)
T ss_dssp BTHHHHHHHHHHHHHTES---EEEEESSHHHHHHHHHHHHH-TTTTCEEEEETT--HHHHHHH----HHHTEEEEEEEEE
T ss_pred ccHHHHHHHHHHHhcCCC---eEEEEecCchHHHHHHHHHh-cCCCCEEEEcCCcHHHHHHHH----HHcCCeEEEecCC
Confidence 457789999999999996 45888899999999999999 899999998888776565553 3459999999875
Q ss_pred CCC----CccCH-----HHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcC--CC
Q 037063 258 WPN----LRIHS-----GKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALG--SK 325 (588)
Q Consensus 258 ~~~----~~i~~-----e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~--~~ 325 (588)
... +.+++ ++|+++|++. ...+..++|++++++ ..|..+++++| ++|+++|++|+||+|+.. +.
T Consensus 137 ~~~~gi~~~i~~~~~~~~~i~~~l~~~---p~~k~~~~vvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F 212 (417)
T PF01276_consen 137 DNEYGIIGGISPDEFNEEDIEEALKEH---PDAKAPRLVVLTSPT-YYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGF 212 (417)
T ss_dssp E-TTS-BEEB-GGGGSHHHHHHHHHHC---TTCHCESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGC
T ss_pred ccccCCccCCChhhhhHHHHHHHHHhC---ccccCceEEEEeCCC-CCeEEECHHHHHHHhcccCCEEEEEccccccccC
Confidence 221 23566 8999999831 111125668888764 59999999999 999999999999999554 21
Q ss_pred CCCCCCCCCCCCc-------EEEeccCccCCCCCCceEEEEEeCcc-h--hcccCCCCCCCceEeeecCCCccccccccc
Q 037063 326 DMDTLGLSLFKPD-------FLICSFYKIFGENPSGFGCLFVKKSS-A--SVLSGSTSSVSTIMGIEPSFSEIIELETLD 395 (588)
Q Consensus 326 d~~~l~l~~~~~D-------~vv~S~~K~~G~~P~G~G~L~v~~~~-~--~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~ 395 (588)
...+.+-...++| +++-|.||.++. -+-.++|.++.+. + ++++..+ .
T Consensus 213 ~~lp~~a~~~gad~~~~~~~~vvqS~HKtL~a-ltQts~lh~~~~~~v~~~~~~~~l----~------------------ 269 (417)
T PF01276_consen 213 HPLPRSALALGADRPNDPGIIVVQSTHKTLPA-LTQTSMLHVKGDRIVDHERVNEAL----S------------------ 269 (417)
T ss_dssp SGGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS--TT-EEEEEETCCCTTHHHHHHHH----H------------------
T ss_pred CCCccchhhccCccccccceeeeechhhcccc-cccceEEEecCCCcccHHHHHHHH----H------------------
Confidence 1001111123378 999999997774 6788999999875 3 2222111 0
Q ss_pred ccccccCCCCCccchhhHHHHHHHHHHH-HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCc--
Q 037063 396 ESSQSKFPESSISGVSSKLVECKGLDHA-DALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDR-- 472 (588)
Q Consensus 396 ~~~f~e~GT~~~~~~~~~~al~~aL~~l-~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~r-- 472 (588)
.| ...+|+++- ++++..|.+++ ...| +++.++...++..++++|.+++ ..+.+++.+|+.-...
T Consensus 270 --~~-~TTSPSY~l---mASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~------~~~~~~~~~~~~v~~~~~ 336 (417)
T PF01276_consen 270 --MH-QTTSPSYPL---MASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLN------DIWGFKVLGPEDVGGEGC 336 (417)
T ss_dssp --HH-S-SS--HHH---HHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHC------CT-SSEESS-SEECTCCG
T ss_pred --HH-cCCChHHHH---HHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcC------CCceEecCCccccCCccc
Confidence 12 333455544 47777888887 4445 5566777778888888885432 2456777766421111
Q ss_pred -----------------------ccEEEEEeec--CCC----CCcCHHHHHHHHHhCCcEec
Q 037063 473 -----------------------GPSLAFNVFD--WNG----TRIDPALVQKLADRHNISLS 505 (588)
Q Consensus 473 -----------------------g~iv~f~~~~--~~g----~~i~~~~v~~~l~~~gI~v~ 505 (588)
.-=+++.+++ .+| ..++...+.+.|.++||.+-
T Consensus 337 ~~~~~~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~E 398 (417)
T PF01276_consen 337 WDLDPGENWHGFEGLADDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVE 398 (417)
T ss_dssp CB--TT-TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-S
T ss_pred cccCccccchhchhcccCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEE
Confidence 1123444421 222 23788889999999999874
No 273
>PLN02624 ornithine-delta-aminotransferase
Probab=99.62 E-value=3.1e-13 Score=147.75 Aligned_cols=342 Identities=11% Similarity=0.082 Sum_probs=206.1
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
.++.-|||..+. |--.+.+++++.+.+....... +.. ..+...
T Consensus 72 ~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~--------------------------~~~-----~~~~~~ 120 (474)
T PLN02624 72 PEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSS--------------------------RAF-----YNDKFP 120 (474)
T ss_pred CCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcc--------------------------ccc-----CCHHHH
Confidence 367889998653 3447788888876664311110 001 034456
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-------CCCCe-EE-EcCCCchhHHHHHHHHHH----hcC
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-------YSNPR-LL-TVYDHENEAAALMIESSK----KRG 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-------~~gd~-ll-~~~e~~s~~~~~~~~~a~----~~G 248 (588)
++.++++++++. + .++|+.++++|+..++.... + .+++. |+ ....||......+ .+.. ..+
T Consensus 121 ~la~~L~~~~~~--~--~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~-s~~~~~~~~~~ 195 (474)
T PLN02624 121 EFAEYLTSMFGY--D--MVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAI-SMSCDNEATRG 195 (474)
T ss_pred HHHHHHHhhcCC--C--eEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHh-hcCCCcccccc
Confidence 788888888864 2 49999999998876664221 1 12333 55 3444555222211 1100 000
Q ss_pred -----CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEe
Q 037063 249 -----ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLD 318 (588)
Q Consensus 249 -----~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvD 318 (588)
..+..++.. |.+.+++.+.. ..+++.+|++..+.+++|.++| +++| ++|+++|+++|+|
T Consensus 196 ~~~~~~~~~~~~~~------d~~~l~~~l~~-----~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~D 264 (474)
T PLN02624 196 FGPLLPGHLKVDFG------DLDALEKIFEE-----DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIAD 264 (474)
T ss_pred CCCCCCCceEeCCC------CHHHHHHHHHh-----CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 112233331 57888888862 1256889999999999999999 8889 9999999999999
Q ss_pred CCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccc
Q 037063 319 ATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLD 395 (588)
Q Consensus 319 aa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~ 395 (588)
.++. ++.. .-..+.....+|++++| |-+|.+...+|++++++++++.+.+...+ .
T Consensus 265 Ev~tG~GrtG~~~a~~~~~i~pDiv~ls--K~lggG~~pigav~~~~~i~~~~~~~~~~--~------------------ 322 (474)
T PLN02624 265 EIQTGLARTGKMLACDWEEVRPDVVILG--KALGGGVIPVSAVLADKDVMLCIKPGEHG--S------------------ 322 (474)
T ss_pred ccccCcCcCcchhhHHhcCCCCCEEEec--ccccCCCCcceeeeecHHHHhHhccCCcC--C------------------
Confidence 9976 2211 11111123458988864 97764224589999988776655433211 0
Q ss_pred ccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCe-EEEeCCCCCCCccc
Q 037063 396 ESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPL-VRIYGPKVMFDRGP 474 (588)
Q Consensus 396 ~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~-v~i~~p~~~~~rg~ 474 (588)
.| | .+... .++..++|+.+.+ +.+.++...+.+++++.|.++... .+. +.-+ ..+|.
T Consensus 323 --T~---~-g~pl~---~aaa~aaLe~l~~---~~l~~~~~~~~~~l~~~L~~l~~~-----~~~~i~~v-----rg~G~ 380 (474)
T PLN02624 323 --TF---G-GNPLA---SAVAMAALQVVQD---EKLAERSAKLGQELRDQLQKIQKQ-----FPKLIKEV-----RGRGL 380 (474)
T ss_pred --CC---C-CCHHH---HHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHh-----CCCceEEE-----EeeEE
Confidence 00 1 11111 2455567776655 346667777888888887775211 121 2111 12456
Q ss_pred EEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHH
Q 037063 475 SLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFED 554 (588)
Q Consensus 475 iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eD 554 (588)
++.+.+............+.+.|.++||.+.++ +...||+++.+..|.+|
T Consensus 381 ~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~------------------------------~~~~lR~~p~l~~t~e~ 430 (474)
T PLN02624 381 LNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPT------------------------------HDTIIRLAPPLSISEDE 430 (474)
T ss_pred EEEEEecCCCcChHHHHHHHHHHHhCCeEEecC------------------------------CCCEEEEECCccCCHHH
Confidence 666665432100012345666778899988643 11289999999999999
Q ss_pred HHHHHHHHHHhhhhhhc
Q 037063 555 TYRLWAFVSRFLDADFV 571 (588)
Q Consensus 555 v~~li~~l~~~l~~~~~ 571 (588)
|+.+++.|+++++.+-.
T Consensus 431 id~~l~~L~~~l~~~~~ 447 (474)
T PLN02624 431 LQECSKALSDVLEHDLP 447 (474)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999887754
No 274
>PRK15029 arginine decarboxylase; Provisional
Probab=99.62 E-value=2.2e-13 Score=153.48 Aligned_cols=234 Identities=12% Similarity=0.022 Sum_probs=162.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
...+.++.+..|+++|++ .+...|+|+|.++..++.+. .++||+|+++.+.|-+.+.++ ...|++.++++..
T Consensus 204 ~G~I~eAq~~aA~~fgA~---~t~FlvNGST~gn~a~i~a~-~~~gd~Vlv~RN~HKSv~~al----~L~ga~Pvyl~P~ 275 (755)
T PRK15029 204 TGAFGESEKYAARVFGAD---RSWSVVVGTSGSNRTIMQAC-MTDNDVVVVDRNCHKSIEQGL----ILTGAKPVYMVPS 275 (755)
T ss_pred CcHHHHHHHHHHHHhCCC---cEEEEeCChhHHHHHHHHHh-cCCCCEEEeecccHHHHHHHH----HHcCCeEEEeccc
Confidence 467889999999999996 45899999999999999998 899999998888876555543 4569999999755
Q ss_pred CCC----CccC-----HHHHHHHHhhhcc--ccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC-
Q 037063 258 WPN----LRIH-----SGKLMKKIVGKRK--KKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS- 324 (588)
Q Consensus 258 ~~~----~~i~-----~e~l~~~i~~~~~--~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~- 324 (588)
+.. +.++ ++.++++|.+... .....++++++++++ +..|..++++.| +.|+++|++|+||.|+.+-
T Consensus 276 ~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~ 354 (755)
T PRK15029 276 RNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_pred ccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceeeCHHHHHHHHHhcCCeEEEECcccccc
Confidence 322 2345 8999999973110 112234568888876 459999999999 9999999999999996551
Q ss_pred -C--CC---CCCCC---CCCCCc-EEEeccCccCCCCCCceEEEEEeCc--chh--cccCCCCCCCceEeeecCCCcccc
Q 037063 325 -K--DM---DTLGL---SLFKPD-FLICSFYKIFGENPSGFGCLFVKKS--SAS--VLSGSTSSVSTIMGIEPSFSEIIE 390 (588)
Q Consensus 325 -~--d~---~~l~l---~~~~~D-~vv~S~~K~~G~~P~G~G~L~v~~~--~~~--~l~~~~~g~~g~v~~~~~~~~~~~ 390 (588)
+ .+ ..+.. ...++| +++-|.||.++. -+...+|.++.. .++ +++..+
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a-lTQaS~LHv~~~~~~id~~r~~~~l------------------ 415 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LSQASYIHVREGRGAINFSRFNQAY------------------ 415 (755)
T ss_pred ccCccccccccccccccccCCCceEEEEchhhcccc-hhhhhhheeCCCccccCHHHHHHHH------------------
Confidence 1 01 22200 113588 899999998874 667778877654 111 111111
Q ss_pred cccccccccccCCCCCccchhhHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHccc
Q 037063 391 LETLDESSQSKFPESSISGVSSKLVECKGLDHADA-LGLILISNRARYLINWLANALMNLH 450 (588)
Q Consensus 391 ~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~-~G~~~i~~r~~~L~~~l~~~L~~L~ 450 (588)
..+ ...+|++.- ++++..|..+++. .| +.+.++...++..++++|.+++
T Consensus 416 ------~~~-qSTSPSY~L---mASLD~ar~~m~~~~G-~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 416 ------MMH-ATTSPLYAI---CASNDVAVSMMDGNSG-LSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred ------HHH-cCCCcHHHH---HHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcc
Confidence 012 333455444 4777788888775 55 4556666777778888887653
No 275
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.62 E-value=7.5e-13 Score=142.16 Aligned_cols=297 Identities=9% Similarity=0.063 Sum_probs=188.1
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--------CCCCCe-EEEc-CCCchhHHHHHHHHHH--
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--------FYSNPR-LLTV-YDHENEAAALMIESSK-- 245 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--------~~~gd~-ll~~-~e~~s~~~~~~~~~a~-- 245 (588)
.+...++.++++++++. + .++|++++++|+..++.... ..+|+. |++. ..||......+. ...
T Consensus 78 ~~~~~~l~~~l~~~~~~--~--~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~-~~~~~ 152 (401)
T TIGR01885 78 NDVFGEFAEYVTKLFGY--D--KVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAIS-MSTDP 152 (401)
T ss_pred CHHHHHHHHHHHhhcCC--C--EEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHh-CcCCc
Confidence 35567888999999874 2 49999999999888877531 123444 5544 445642332221 111
Q ss_pred ----hcC---CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCc
Q 037063 246 ----KRG---ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGW 313 (588)
Q Consensus 246 ----~~G---~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~ 313 (588)
..| ..+..++. -|+++|+++|+. . .++..+|++..+.+++|...| +++| ++|+++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~------~d~~~le~~l~~----~-~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~ 221 (401)
T TIGR01885 153 DSRTNFGPYVPGFKKIPY------NNLEALEEALED----H-GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNV 221 (401)
T ss_pred ccccccCCCCCCceEeCC------CCHHHHHHHHHh----c-CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 012 12333332 167899998862 1 246788889999999999998 8899 99999999
Q ss_pred EEEEeCCCcC-CCCCCC--CCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccc
Q 037063 314 HVLLDATALG-SKDMDT--LGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIE 390 (588)
Q Consensus 314 ~vvvDaa~~~-~~d~~~--l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~ 390 (588)
++++|.++.. +..-.. +......+|++++| |.++.+-..+|+++.++++++.+.....+ .
T Consensus 222 lli~DEv~~g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ig~v~~~~~i~~~~~~~~~~---~------------ 284 (401)
T TIGR01885 222 LLIADEIQTGLGRTGKLLCVDHENVKPDIVLLG--KALSGGVYPVSAVLADDDVMLTIKPGEHG---S------------ 284 (401)
T ss_pred EEEEechhhCCCccchhhHHhhcCCCCCEEEee--ccccCCCCCcEEEEEcHHHHhhccCCCCC---C------------
Confidence 9999999632 211111 11123458988765 96663112478899888887766532211 0
Q ss_pred cccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCC
Q 037063 391 LETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMF 470 (588)
Q Consensus 391 ~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~ 470 (588)
.| .| +... .++..++|+.+.+ +.+.++.+.+.+++++.|.++.+ +.+..+ .
T Consensus 285 -------t~--~~--~p~~---~~aa~a~L~~i~~---~~l~~~~~~~~~~~~~~L~~l~~-------~~~~~~-----~ 335 (401)
T TIGR01885 285 -------TY--GG--NPLA---CAVAVAALEVLEE---EKLAENAEKLGEIFRDQLKKLPK-------PIITEV-----R 335 (401)
T ss_pred -------CC--CC--CHHH---HHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhccC-------CceeEE-----e
Confidence 01 11 1111 2455577777765 34667888999999999998732 222111 1
Q ss_pred CcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCC
Q 037063 471 DRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLT 550 (588)
Q Consensus 471 ~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~ 550 (588)
..|.++.+.+.+... ......+.+.|.++||.+..+ +...||+++++..
T Consensus 336 g~g~~~~i~~~~~~~-~~~~~~l~~~l~~~Gv~v~~~------------------------------~~~~lRi~p~l~~ 384 (401)
T TIGR01885 336 GRGLLNAIVIDESKT-GRTAWDLCLKLKEKGLLAKPT------------------------------HGNIIRLAPPLVI 384 (401)
T ss_pred ecCeeEEEEeccCcc-hhHHHHHHHHHHhCCEEEEec------------------------------CCCEEEEeCCccC
Confidence 346777766643210 123456677777889987542 1128999999999
Q ss_pred CHHHHHHHHHHHHHhhh
Q 037063 551 NFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 551 t~eDv~~li~~l~~~l~ 567 (588)
+++||+++++.|++++|
T Consensus 385 t~~~i~~~l~~l~~~l~ 401 (401)
T TIGR01885 385 TEEQLDEGLEIIKKVID 401 (401)
T ss_pred CHHHHHHHHHHHHHHhC
Confidence 99999999999998875
No 276
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.62 E-value=2.9e-14 Score=145.67 Aligned_cols=179 Identities=16% Similarity=0.169 Sum_probs=136.7
Q ss_pred hHHHHHHHHHHHHHhCC--CCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 178 SELESKIRKRIMDFMNI--SEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga--~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++.+.+++.++.++|. +++ .+|..|.|+.++|..++.++ +.+||+|+...+++-.+++. . +..|++.++++
T Consensus 72 p~L~~aL~k~~se~~~~~~~~~-~eVlVT~GA~~ai~~~~~~l-~~~GDeVii~eP~fd~Y~~~-~---~maG~tpv~v~ 145 (420)
T KOG0257|consen 72 PQLRKALAKAYSEFYGGLLDPD-DEVLVTAGANEAISSALLGL-LNPGDEVIVFEPFFDCYIPQ-V---VMAGGTPVFVP 145 (420)
T ss_pred hHHHHHHHHHHHHHhccccCCc-ccEEEecCchHHHHHHHHHH-cCCCCEEEEecCcchhhhhH-H---hhcCCcceeec
Confidence 57888899999998874 233 35999999999999888888 99999977665655435443 2 44699999998
Q ss_pred cc-------CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCC-C-c
Q 037063 256 FA-------WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDAT-A-L 322 (588)
Q Consensus 256 ~~-------~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa-~-~ 322 (588)
.. .+++.+|.++++.+++ ++|++|+++.++||||..++-++ | ++|++||++||.|.+ . +
T Consensus 146 ~~~~~g~~~s~~~~~D~~~le~~~t--------~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~ 217 (420)
T KOG0257|consen 146 LKPKEGNVSSSDWTLDPEELESKIT--------EKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWL 217 (420)
T ss_pred cccccccccCccccCChHHHHhhcc--------CCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHH
Confidence 87 4567899999999999 88999999999999999999666 5 889999999999997 1 1
Q ss_pred C--C---CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCC
Q 037063 323 G--S---KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGS 371 (588)
Q Consensus 323 ~--~---~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~ 371 (588)
+ + +....+ ...+..-+-+.|+.|.||+-.-.+|+++..+.++..+.+.
T Consensus 218 v~d~~~h~r~asl-Pgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~v 270 (420)
T KOG0257|consen 218 VYDGNKHIRIASL-PGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPV 270 (420)
T ss_pred hhCCCcceeeecC-CchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHHH
Confidence 1 2 111122 2334456788999999994333499999977766555443
No 277
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.61 E-value=4.4e-13 Score=143.34 Aligned_cols=330 Identities=14% Similarity=0.082 Sum_probs=198.6
Q ss_pred CCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+.-|||..+ .|.-.+.+.+++.+.+......++ . . ..+...+
T Consensus 34 dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~------------------------~--~-----~~~~~~~ 82 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSP------------------------A--F-----YNEPMAK 82 (395)
T ss_pred CCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccc------------------------c--c-----cCHHHHH
Confidence 5788999764 566678888887666532111110 0 0 0233344
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C----CCC-CeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F----YSN-PRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~----~~g-d~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
+-+++.+..+. ..++|++++++|+..++.... + ++| ++|+ ....||......+ ......+....+.|.
T Consensus 83 la~~l~~~~~~----~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~ 157 (395)
T PRK03715 83 LAGLLTQHSCF----DKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATM-SASGKPGWDTIFAPQ 157 (395)
T ss_pred HHHHHhhccCC----CEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHH-hhcCCcccccCCCCC
Confidence 45555443322 249999999999887776542 1 123 3454 5666776444332 221111111111111
Q ss_pred cCC---CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCcC-C---
Q 037063 257 AWP---NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATALG-S--- 324 (588)
Q Consensus 257 ~~~---~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~~-~--- 324 (588)
... ....+.+++++.+. +++.+|++..++...|.+.| +++| ++|+++|+++|+|.++.. +
T Consensus 158 ~~~~~~~~~~d~~~l~~~l~--------~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG 229 (395)
T PRK03715 158 VPGFPKAELNDIASVEKLIT--------DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTG 229 (395)
T ss_pred CCCceeeCCchHHHHHHHcC--------CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCc
Confidence 100 00136788888886 57899999999999999988 8889 999999999999999763 2
Q ss_pred C--CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccC
Q 037063 325 K--DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKF 402 (588)
Q Consensus 325 ~--d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~ 402 (588)
. -...+++ .||++++ -|.+|. ...+|++++++++.. +.+... .
T Consensus 230 ~~~a~~~~gv---~PDi~t~--gK~lg~-G~p~~av~~~~~i~~-~~~~~~----------------------------~ 274 (395)
T PRK03715 230 TLFAYELSGI---EPDIMTL--GKGIGG-GVPLAALLAKAEVAV-FEAGDQ----------------------------G 274 (395)
T ss_pred chhhHhhcCC---CCceeee--hhhhhC-CcceEEEEEcccccc-ccCCCc----------------------------C
Confidence 1 0122333 4898665 496663 234888888888742 111111 1
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeec
Q 037063 403 PESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFD 482 (588)
Q Consensus 403 GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~ 482 (588)
+|.+-..+ ..++..++|+.+++ +.+.++++++.++|+++|+++.... ++..++ .+|.++.+.+.+
T Consensus 275 ~T~~g~pl-~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~---~i~~vr--------G~Glm~~i~l~~ 339 (395)
T PRK03715 275 GTYNGNPL-MTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEER---GLEGER--------GEGLLRALLLGK 339 (395)
T ss_pred CCCCCCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcC---CcCeEE--------cceeEEEEEecC
Confidence 11111111 12444566777654 5678888999999999988763211 111111 356788887754
Q ss_pred CCCCCcCHHHHHHHHHhC---CcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHH
Q 037063 483 WNGTRIDPALVQKLADRH---NISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLW 559 (588)
Q Consensus 483 ~~g~~i~~~~v~~~l~~~---gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li 559 (588)
. ....+.+.+.+. ||.+... +.+.||+++....|.+||++++
T Consensus 340 ~-----~~~~~~~~~~~~~~~Gi~~~~~------------------------------~~~~lR~~p~l~~t~~ei~~~~ 384 (395)
T PRK03715 340 D-----IGPQIVEKARDMQPDGLLLNAP------------------------------RPNLLRFMPALNVTTEEIDQMI 384 (395)
T ss_pred c-----hHHHHHHHHHhccCCCEEEeec------------------------------CCCEEEEeCCcccCHHHHHHHH
Confidence 2 134455556656 8887421 1128999999999999999999
Q ss_pred HHHHHhhhh
Q 037063 560 AFVSRFLDA 568 (588)
Q Consensus 560 ~~l~~~l~~ 568 (588)
+.|++.+++
T Consensus 385 ~~l~~~l~~ 393 (395)
T PRK03715 385 AMLRSVLDK 393 (395)
T ss_pred HHHHHHHHh
Confidence 999998764
No 278
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.60 E-value=9.4e-13 Score=126.73 Aligned_cols=314 Identities=12% Similarity=0.089 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc-
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA- 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~- 257 (588)
.-+.+..+.+++|+|+| .+-+|.|+-+|=..+..++ -++||-|+.+...|-+++ -.|++.|..|..||-.
T Consensus 61 PpI~~F~~dlaeFlg~D----~~R~t~GARe~KfavMhal-~~~gd~vV~D~~aHYtty----vAAEragl~v~eVp~tg 131 (382)
T COG1103 61 PPIKDFLEDLAEFLGMD----EVRVTAGAREAKFAVMHAL-CKEGDWVVVDSLAHYTTY----VAAERAGLNVAEVPNTG 131 (382)
T ss_pred CcHHHHHHHHHHHhCCc----eeeecccchhhHHHHHHHh-ccCCCEEEEcCcchHHHH----HHHHhcCCeEEecCCCC
Confidence 34556777799999995 3889999999999999999 789999776654442232 2467889999999964
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFK 336 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~ 336 (588)
.|+..+++|...+.|++- .......+.|..++|+....|.+.|.+.+ ++|+++|+++++.+|-.++ ..++.....+
T Consensus 132 ~Pey~i~~e~y~~viee~-~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~G--rmpvs~ke~g 208 (382)
T COG1103 132 YPEYKITPEGYAEVIEEV-KDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVG--RMPVSGKEIG 208 (382)
T ss_pred CCceEecHHHHHHHHHHH-HhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeec--cccccccccC
Confidence 367889999999998741 11222568999999999999999999999 9999999999999997776 2334444455
Q ss_pred CcEEEeccCc-cCCCCCCceEEEEEeCcchhcc-cCCCCCCCceEeeecCCCcccccccccccccccCC-CCCccchhhH
Q 037063 337 PDFLICSFYK-IFGENPSGFGCLFVKKSSASVL-SGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP-ESSISGVSSK 413 (588)
Q Consensus 337 ~D~vv~S~~K-~~G~~P~G~G~L~v~~~~~~~l-~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G-T~~~~~~~~~ 413 (588)
+||++.|+|| |-.. .-+|+|-++.+..+.. +..-.. .... .++ -.| |.-=.. +
T Consensus 209 ~DFiVgSGHKsmAAs--~PiGvl~~~eE~ae~V~r~Sg~~--~~~K---------Eve--------llGCT~rGap---i 264 (382)
T COG1103 209 ADFIVGSGHKSMAAS--APIGVLAMSEEWAEIVLRRSGRA--FPKK---------EVE--------LLGCTVRGAP---I 264 (382)
T ss_pred CCEEEecCccchhcc--CCeeEEeehhHHHHHHHhhcccc--cccc---------eee--------eecccccCch---H
Confidence 9999999999 4443 2389999999887643 222100 0000 000 012 211111 2
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHH
Q 037063 414 LVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALV 493 (588)
Q Consensus 414 ~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v 493 (588)
..+.+.+-++.+. -+......+-++|+.+.|.++ .+++..|.+. .+--++-|..+. ..++
T Consensus 265 vTlmASfP~V~eR--VkrWdeEv~kaR~fv~elEki---------gg~~qlG~rP--k~HdLm~Fetp~-------f~eI 324 (382)
T COG1103 265 VTLMASFPHVVER--VKRWDEEVEKARWFVAELEKI---------GGVKQLGERP--KNHDLMKFETPV-------FHEI 324 (382)
T ss_pred HHHHhcCHHHHHH--HHHHHHHHHHHHHHHHHHHHh---------hhHHHhCCCC--cccceeeecCch-------HHHH
Confidence 3444555555432 222333345678999999986 3566666432 223455555433 2233
Q ss_pred HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCcc-EEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 494 QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVS-VVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 494 ~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~-~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.+...+.|..+- ..|..+..- .-..|.. .+.+|. +-.+.|+|+..++++++++++
T Consensus 325 akk~~r~gyFlY------------------~ELK~RgI~-GI~~G~Tk~~K~sv-yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 325 AKKHKRKGYFLY------------------EELKKRGIH-GIQPGQTKYFKLSV-YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred HHhCcCCceeeH------------------HHHHhcCcc-ccccCceeEEEEEe-ecCCHHHHHHHHHHHHHHHHh
Confidence 332223333221 111111000 0012222 788886 334889999999999998765
No 279
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.59 E-value=8.2e-13 Score=140.64 Aligned_cols=326 Identities=10% Similarity=0.109 Sum_probs=193.3
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|||..+. |.-++.+.+++.+.+..... . +... ..+...+
T Consensus 27 ~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~--~------------------------~~~~-----~~~~~~~ 75 (377)
T PRK02936 27 NGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWH--V------------------------SNLF-----TNSLQEE 75 (377)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccc--c------------------------cccc-----CCHHHHH
Confidence 57789997554 66778888888766632100 0 0000 0234445
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCC-CeEE-EcCCCchhHHHHHHHHHHhcCC---------EEE
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSN-PRLL-TVYDHENEAAALMIESSKKRGA---------RVS 252 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~g-d~ll-~~~e~~s~~~~~~~~~a~~~G~---------~v~ 252 (588)
+.+++.+..+. + .++|++++++|+..++......+| ++|+ ....||...+.++. ....... .+.
T Consensus 76 la~~l~~~~~~--~--~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~-~~~~~~~~~~~~~~~~~~~ 150 (377)
T PRK02936 76 VASLLAENSAG--D--LVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMS-ATGQEKIKEGFGPLLPGFT 150 (377)
T ss_pred HHHHHHhcCCC--C--EEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhh-ccCCccccccCCCCCCCce
Confidence 55555554443 2 499999999999888774322244 4455 55667754444432 1110000 112
Q ss_pred EEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCcC-CCC
Q 037063 253 SAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATALG-SKD 326 (588)
Q Consensus 253 ~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~~-~~d 326 (588)
.++.+ |++++++.+. +++++|++..+++..|...+ +++| ++|+++|+++|+|.++.. +..
T Consensus 151 ~~~~~------d~~~l~~~~~--------~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~ 216 (377)
T PRK02936 151 HVPFN------DIKALKEVMN--------EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRT 216 (377)
T ss_pred EeCCC------CHHHHHHhcc--------CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC
Confidence 22221 6788988887 67899999999998887754 7778 999999999999999642 211
Q ss_pred CCCCC--CCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 327 MDTLG--LSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 327 ~~~l~--l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
-..+. .....+|++ ++.|.+|. ...+|+++.++++.+.+...... . ..+.
T Consensus 217 g~~~~~~~~~~~~di~--t~sK~l~~-G~~ig~v~~~~~~~~~~~~~~~~--~-----------------------t~~~ 268 (377)
T PRK02936 217 GTLFAYEQFGLDPDIV--TVAKGLGN-GIPVGAMIGKKELGTAFGPGSHG--S-----------------------TFGG 268 (377)
T ss_pred chhhHHHhhCCCCcEE--EEcccccC-CCccEEEEEcHHHHhhccCCCCC--C-----------------------CCCC
Confidence 01111 111236754 68998872 22388999888876655432211 0 0111
Q ss_pred CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCC
Q 037063 405 SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWN 484 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~ 484 (588)
+++. .++..++|+.+.. +...++++...+++++.|.++.. +.+.+..+. ..|.++.+.+.+
T Consensus 269 ~~~~----~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~-----~~~~~~~v~-----~~g~~~~i~~~~-- 329 (377)
T PRK02936 269 NPLA----MAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELE-----HLECVKNIR-----GKGLMIGIECTE-- 329 (377)
T ss_pred CHHH----HHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHh-----hCCcEEeEe-----ecceEEEEEecc--
Confidence 1111 1455566666532 23445556666666666655200 022222111 235566666654
Q ss_pred CCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 485 GTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 485 g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
+...+.+.|.++||.+..+ |...||++++...+.+||+++++.|.+
T Consensus 330 ----~~~~~~~~l~~~gv~v~~~------------------------------g~~~lRi~p~~~~~~~~i~~~i~~l~~ 375 (377)
T PRK02936 330 ----EVAPVIEQLREEGLLVLSA------------------------------GPNVIRLLPPLVVTKEELDQAVYLLKK 375 (377)
T ss_pred ----hHHHHHHHHHHCCeEEecC------------------------------CCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 1456777888899987542 112899999999999999999999987
Q ss_pred hh
Q 037063 565 FL 566 (588)
Q Consensus 565 ~l 566 (588)
+|
T Consensus 376 ~~ 377 (377)
T PRK02936 376 VL 377 (377)
T ss_pred hC
Confidence 54
No 280
>PLN02368 alanine transaminase
Probab=99.59 E-value=2.8e-13 Score=145.09 Aligned_cols=181 Identities=12% Similarity=0.056 Sum_probs=125.3
Q ss_pred HHHHHHHHHh----CCCCCCceEEEecCHHHHHHHHHHhCCC-CCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 183 KIRKRIMDFM----NISEDDYTLVFTANQSSAFKLLAESYPF-YSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~-~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
++|+.|++++ |.+-+..+|++|+|+++|+.+++.++ + ++||+|++....+..+ ...++..|++++.++++
T Consensus 111 ~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l-~~~pGd~Vli~~P~Y~~y----~~~~~~~g~~~v~v~~~ 185 (407)
T PLN02368 111 GVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAV-IRGEKDGVLVPVPQYPLY----SATISLLGGTLVPYYLE 185 (407)
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHH-cCCCCCEEEEeCCCCccH----HHHHHHcCCEEEEEecc
Confidence 5666666665 64322335999999999999999988 6 6999977665544322 34456789999999986
Q ss_pred CC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCC--cC--CC-CC
Q 037063 258 WP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATA--LG--SK-DM 327 (588)
Q Consensus 258 ~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~--~~--~~-d~ 327 (588)
.+ +..++.++|++.++.. +.+..++++++++.++||||..++.+++ ++|+++|++||.|.+- +. +. ..
T Consensus 186 ~~~~~~~d~~~le~~i~~~--~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~ 263 (407)
T PLN02368 186 ESENWGLDVNNLRQSVAQA--RSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPF 263 (407)
T ss_pred cccCCCCCHHHHHHHHHHH--hhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCc
Confidence 32 3578999999998720 0111378999999999999999998875 6789999999999972 21 10 01
Q ss_pred CC---C--CCC----CCCCcEEEeccCccC-CCCCCceEEEEE---eCcchhcccC
Q 037063 328 DT---L--GLS----LFKPDFLICSFYKIF-GENPSGFGCLFV---KKSSASVLSG 370 (588)
Q Consensus 328 ~~---l--~l~----~~~~D~vv~S~~K~~-G~~P~G~G~L~v---~~~~~~~l~~ 370 (588)
.+ + ++. ....-+++.||+|.| |++..++|++++ ++++++.+..
T Consensus 264 ~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~ 319 (407)
T PLN02368 264 ISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYK 319 (407)
T ss_pred ccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHH
Confidence 11 0 110 111236778999976 754567999985 6666665543
No 281
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.57 E-value=2e-12 Score=137.57 Aligned_cols=288 Identities=13% Similarity=0.126 Sum_probs=170.1
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEE-EcCCCchhHHHHHHHHHHh------cCCEEEEE
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLL-TVYDHENEAAALMIESSKK------RGARVSSA 254 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll-~~~e~~s~~~~~~~~~a~~------~G~~v~~v 254 (588)
+.++.+++.+...++ ..++|++++|+|+..++.... +..+++|+ ....||......+ ..... .+..+..+
T Consensus 70 ~~~~~la~~l~~~~~-~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~-~~~~~~~~~~~~~~~~~~~ 147 (375)
T PRK04260 70 SLQEEVAQKLIGDKD-YLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSM-SATGQDKIKDGFGDGVPHF 147 (375)
T ss_pred HHHHHHHHHHhcCcC-CEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHH-hccCCcccCCCCCCCCCCe
Confidence 455666665544333 246899999999886666431 23345555 5667775343332 11100 01111111
Q ss_pred eccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCcC-CCC--
Q 037063 255 EFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATALG-SKD-- 326 (588)
Q Consensus 255 ~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~~-~~d-- 326 (588)
+.. ...|.+++++.+. +++.+|++..+++.+|.+.| +++| ++|+++|+++++|+++.. +..
T Consensus 148 ~~~---~~~dl~~l~~~l~--------~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~ 216 (375)
T PRK04260 148 SYA---IFNDLNSVKALVN--------KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGK 216 (375)
T ss_pred EEe---CCCCHHHHHHhcC--------CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc
Confidence 110 0136788888776 57899999999999999877 7888 999999999999999642 211
Q ss_pred CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 327 MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 327 ~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
.-........+|++ ++.|.+|. ...+|++++++++.+.+...... + ..+..+
T Consensus 217 ~~~~~~~~~~pdi~--t~sK~l~~-G~~ig~~~~~~~~~~~~~~~~~~--~-----------------------t~~~~~ 268 (375)
T PRK04260 217 LYAFEHYGIEPDIF--TLAKGLAN-GVPVGAMLAKSSLGGAFGYGSHG--S-----------------------TFGGNK 268 (375)
T ss_pred hhhhHhhCCCCCEE--EecccccC-CcceEEEEEcHHHHhhcCCCCCC--C-----------------------CCCcCH
Confidence 11111112348844 79997772 23489999998876655432111 0 001111
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCCCCcccEEEEEeecCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVMFDRGPSLAFNVFDWNG 485 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~~~rg~iv~f~~~~~~g 485 (588)
+ . .++..+.|+.+.. +.+.++++...+.+++.|.++-.. .+.+ .+- ..|.++.+.+.
T Consensus 269 ~-~---~~aa~a~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~------~~g~~~~~~~~---- 326 (375)
T PRK04260 269 L-S---MAAASATLDIMLT---AGFLEQALENGNYLQEQLQKALQD-----KETVTTVR------GLGYMIGIETT---- 326 (375)
T ss_pred H-H---HHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHhh-----CCCeeEEe------ccceEEEEEec----
Confidence 1 1 1344455555443 345556666666666655543100 1111 111 13556666552
Q ss_pred CCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 486 TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 486 ~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
.+...+.+.+.++||.+.++ +...||++++...+.+||+++++.|++.
T Consensus 327 --~~~~~~~~~l~~~Gi~v~~~------------------------------~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 327 --ADLSQLVEAARDKGLIVLTA------------------------------GTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred --CcHHHHHHHHHhCCCEEecC------------------------------CCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 23567788888899988542 1128999999999999999999998765
No 282
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.57 E-value=3.2e-12 Score=137.00 Aligned_cols=329 Identities=12% Similarity=0.076 Sum_probs=203.7
Q ss_pred CCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+.-|+|..+ .|.-.+.+.+++.+.+...... . ... ..+...+
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~-~---------------------~~~---------~~~~~~~ 81 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHI-G---------------------NGY---------TNEPVLR 81 (397)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccc-c---------------------Ccc---------CCHHHHH
Confidence 5778999866 5677788888886665321100 0 000 1344568
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----CCCC-eEE-EcCCCchhHHHHHHHHHHhc--------
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----YSNP-RLL-TVYDHENEAAALMIESSKKR-------- 247 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~~gd-~ll-~~~e~~s~~~~~~~~~a~~~-------- 247 (588)
+.++++++++. + .+.|++++++|+..++.... + .+|. +|+ ....||......+ ......
T Consensus 82 la~~L~~~~~~--~--~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~-~~~~~~~~~~~~~~ 156 (397)
T TIGR03246 82 LAKKLVDATFA--D--KVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTV-SVGGQPKYSQGFAP 156 (397)
T ss_pred HHHHHHhhCCC--C--EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHH-HhcCCcccccCCCC
Confidence 88999998865 2 49999999999887777531 1 1233 344 5666776443222 221100
Q ss_pred -CCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccC-C---HHHH-HHHHHcCcEEEEeCCC
Q 037063 248 -GARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARY-S---YMWM-SVAAEKGWHVLLDATA 321 (588)
Q Consensus 248 -G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~-p---l~~I-~~a~~~g~~vvvDaa~ 321 (588)
...+..++. -|.+++++.|. +++++|++..+++..|... | +++| ++|+++|+++|+|.++
T Consensus 157 ~~~~~~~~~~------~d~~~l~~~l~--------~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~ 222 (397)
T TIGR03246 157 LPGGIKHAPY------NDLAAAKALIS--------DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ 222 (397)
T ss_pred CCCceEEeCC------CCHHHHHHHhc--------cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 012233333 26789998887 6789999998888888765 3 6667 8999999999999996
Q ss_pred cC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccc
Q 037063 322 LG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLD 395 (588)
Q Consensus 322 ~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~ 395 (588)
.. +. ....++ ..||++ ++.|.+|. ..-+|++++++++++.+.....+ .
T Consensus 223 tG~Gr~G~~~a~~~~g---v~pDi~--t~~K~lgg-G~pigav~~~~~i~~~~~~~~~~--~------------------ 276 (397)
T TIGR03246 223 TGVGRTGELYAYMHYG---VTPDIL--TSAKALGG-GFPIGAMLTTTEIAAHLKVGTHG--T------------------ 276 (397)
T ss_pred hcCCccccchhhhhcC---CCCCEE--EeehhhhC-CcceeEEEEcHHHHHhccCCCcC--C------------------
Confidence 32 11 012223 248876 67896652 23489999998887766432211 0
Q ss_pred ccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE
Q 037063 396 ESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS 475 (588)
Q Consensus 396 ~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i 475 (588)
.| .| +..+ .++..++|+.+.+ +++.++.+.+.+++.+.|+++... .+.+.-+ ...|.+
T Consensus 277 --t~--~~--~p~~---~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~-----~~~~~~v-----rg~G~~ 334 (397)
T TIGR03246 277 --TY--GG--NPLA---CAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINAR-----YNVFSEI-----RGKGLL 334 (397)
T ss_pred --CC--CC--CHHH---HHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhc-----CCCeEee-----ecCceE
Confidence 01 01 1111 2344466666543 567888889999999999886311 1211111 123556
Q ss_pred EEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHH
Q 037063 476 LAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDT 555 (588)
Q Consensus 476 v~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv 555 (588)
+.+.+.+... -....+.+.|.++||.+... |.++||+++.+..|.+||
T Consensus 335 ~~i~~~~~~~--~~~~~~~~~l~~~Gv~~~~~------------------------------g~~~lR~~p~~~~t~~~i 382 (397)
T TIGR03246 335 IGAVLTEAYQ--GKAKQFVNAAAEEGVIALIA------------------------------GPNVVRFAPSLVISDDDI 382 (397)
T ss_pred EEEEEcCchh--hHHHHHHHHHHHCCeEEeec------------------------------CCCEEEEeCCCCCCHHHH
Confidence 6665543100 12345667777789987531 123899999999999999
Q ss_pred HHHHHHHHHhhhh
Q 037063 556 YRLWAFVSRFLDA 568 (588)
Q Consensus 556 ~~li~~l~~~l~~ 568 (588)
+++++.|.+++++
T Consensus 383 ~~~~~~l~~~l~~ 395 (397)
T TIGR03246 383 DEGLARFERAIEQ 395 (397)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998864
No 283
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.57 E-value=2.5e-12 Score=139.00 Aligned_cols=348 Identities=12% Similarity=0.043 Sum_probs=205.9
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+. |--.+.+.+++.+.+..-..... .. ...+...
T Consensus 39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~---------------------~~---------~~~~~~~ 88 (423)
T PRK05964 39 ADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIF---------------------AG---------FTHEPAE 88 (423)
T ss_pred CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccc---------------------cc---------cCCHHHH
Confidence 367889997654 66677888888666532111000 00 0134445
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----CCCC-eEE-EcCCCchhHHHHHHHHHHhcC------
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----YSNP-RLL-TVYDHENEAAALMIESSKKRG------ 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~~gd-~ll-~~~e~~s~~~~~~~~~a~~~G------ 248 (588)
++.+++.+.+.... +.|.|+.++++|+..+++... + ++|. +|+ ....||.....++ .+.....
T Consensus 89 ~la~~l~~~~p~~~--~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~l-s~~~~~~~~~~~~ 165 (423)
T PRK05964 89 RLAQRLVALTPGGL--DHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTM-SVGDRGGMHALYT 165 (423)
T ss_pred HHHHHHHHhCCCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHH-hcCCCcccccccc
Confidence 77778888764221 359999999998887665321 1 1344 355 5667776444332 2211100
Q ss_pred ---CEEEEEeccCCC-CccCHHHHHHHHhhhccccCCCcceEEEEeC-CCCCCCccCC----HHHH-HHHHHcCcEEEEe
Q 037063 249 ---ARVSSAEFAWPN-LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPL-QSKVTGARYS----YMWM-SVAAEKGWHVLLD 318 (588)
Q Consensus 249 ---~~v~~v~~~~~~-~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~-~sn~tG~~~p----l~~I-~~a~~~g~~vvvD 318 (588)
..+..+++...+ ...+.+++++.+.+ ..++...|++.- ++...|.+.| +++| ++|+++|+++|+|
T Consensus 166 ~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~-----~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~D 240 (423)
T PRK05964 166 PLLFEQVTAPFPPDGYEQATLDALEALLEK-----HAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFD 240 (423)
T ss_pred CcCCCCEEeCCCcchhHHHHHHHHHHHHHh-----CCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 123344442111 01126777777752 124566666665 5777898886 6678 9999999999999
Q ss_pred CCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCC-CceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 319 ATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENP-SGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 319 aa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P-~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
.++. ++.. +-........||+++++ |.+|. + ..+|+++.++++.+.+...... +.
T Consensus 241 Ev~tg~gr~G~~~a~~~~~v~pDi~~~~--K~l~g-G~~p~~av~~~~~i~~~~~~~~~~--~~---------------- 299 (423)
T PRK05964 241 EIATGFGRTGTLFACEQAGVSPDIMCLS--KGLTG-GYLPLAATLCTAEIFEAFYSDDRA--KA---------------- 299 (423)
T ss_pred chhhCCCcCcchhHHHhcCCCCCeeeee--hhhhc-CcccceEEEEcHHHHHhhhcCCcc--cc----------------
Confidence 9974 2210 10001112348987654 97753 3 3588899998887766432100 00
Q ss_pred cccccccCCCC--CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCc
Q 037063 395 DESSQSKFPES--SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDR 472 (588)
Q Consensus 395 ~~~~f~e~GT~--~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~r 472 (588)
.+ ..+|. +..+ +++..++|+.+.+ +.+.+++..+.+++++.|.++. +.+.+.-+ ...
T Consensus 300 ---~~-~~~T~~~np~~---~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~------~~~~i~~v-----rg~ 358 (423)
T PRK05964 300 ---FM-HSPSYTANPLA---CAAANASLDLFED---EPVLERVAALSAGLAEGLEPFR------DLPGVADV-----RVL 358 (423)
T ss_pred ---cc-cCCCCCcCHHH---HHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhc------cCCCeEEe-----ecc
Confidence 00 12232 2222 2455567777665 4567888888999999888762 12333211 134
Q ss_pred ccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCH
Q 037063 473 GPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNF 552 (588)
Q Consensus 473 g~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~ 552 (588)
|.++.+.+.+.... -....+.+.|.++||.++.. . ..||+++++.+|.
T Consensus 359 Gl~~~i~l~~~~~~-~~~~~l~~~l~~~Gv~v~~~-----------------------------~--~~lR~~p~l~~t~ 406 (423)
T PRK05964 359 GAIGAVELDRPVLE-RDGPALRAFALERGVLLRPL-----------------------------G--NTIYLMPPYIITA 406 (423)
T ss_pred cEEEEEEeccCcch-hHHHHHHHHHHHCCeEEEec-----------------------------C--CEEEEeCCcccCH
Confidence 67778877542100 01445677777899987632 1 1899999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 037063 553 EDTYRLWAFVSRFLDA 568 (588)
Q Consensus 553 eDv~~li~~l~~~l~~ 568 (588)
+||+++++.+++.+++
T Consensus 407 edId~~v~~l~~al~~ 422 (423)
T PRK05964 407 EELDRITDAIVEVADE 422 (423)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998864
No 284
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.57 E-value=1.1e-12 Score=132.28 Aligned_cols=297 Identities=13% Similarity=0.126 Sum_probs=197.9
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEecCHH---HHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 180 LESKIRKRIMDFMNISEDDYTLVFTANQS---SAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 180 ~~~~~r~~ia~~lga~~~e~~vvft~g~T---~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
...++.+.+|++..-+. .++|++..- .-+..++.-+ ||-+|.++...|++.+.+++ ..+++-.....
T Consensus 217 ~hv~LE~eLA~LHqK~a---ALlFsSCfVANDstLftLak~l---pgcei~SD~gNHASMI~GIr----ns~v~K~IFrH 286 (570)
T KOG1360|consen 217 HHVRLEAELADLHQKEA---ALLFSSCFVANDSTLFTLAKKL---PGCEIFSDEGNHASMIQGIR----NSRVPKHIFRH 286 (570)
T ss_pred hhhhHHHHHHHHhcCcc---eeeeeeeeeccchHHHHHHHHC---CCcEEeccccchHHHHHHhh----hcCCcceeecc
Confidence 34588889999988753 378776542 2345555655 57778888877775554543 33443333332
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC------CCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK------DMDT 329 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~------d~~~ 329 (588)
-|+++|+++|. +..+..+|+|+|..+.+++|.+-|+++| ++|+++|++.++|.++.++. -+.+
T Consensus 287 ------ND~~hL~~lL~----~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvge 356 (570)
T KOG1360|consen 287 ------NDLDHLEQLLQ----SSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGE 356 (570)
T ss_pred ------CCHHHHHHHHH----hCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccc
Confidence 27899999997 3444678999999999999999999999 99999999999999987751 0111
Q ss_pred CCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccc
Q 037063 330 LGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISG 409 (588)
Q Consensus 330 l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~ 409 (588)
-+--..++|+|.+..-|.||. .| |++.....+++.++.+..| . +| |-+.+.
T Consensus 357 rdGvm~kvDiIsGTLgKafGc--VG-GYIAat~~LvDmiRSyAaG---F-------------------IF----TTSLPP 407 (570)
T KOG1360|consen 357 RDGVMHKVDIISGTLGKAFGC--VG-GYIAATRKLVDMIRSYAAG---F-------------------IF----TTSLPP 407 (570)
T ss_pred cCCcchhhhhcccchhhhccc--cc-ceehhhhhHHHHHHHhcCc---e-------------------EE----ecCCCh
Confidence 111235689999999999994 33 7777778888777655533 1 22 111111
Q ss_pred hhhHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCc
Q 037063 410 VSSKLVECKGLDHADAL-GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~-G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i 488 (588)
. .+++...++++++.. | ..+++..+...+++++.|.++ |+|.+. ..+.|+...+.+.. .
T Consensus 408 ~-vl~GAleaVr~lk~~eg-~~lR~~hqrnv~~~kq~l~~~-------GiPVi~--------~pSHIiPv~vgda~---l 467 (570)
T KOG1360|consen 408 M-VLAGALEAVRILKSEEG-RVLRRQHQRNVKYVKQLLMEL-------GIPVIP--------NPSHIIPVRVGDAA---L 467 (570)
T ss_pred H-HHHhHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHHc-------CCcccC--------CCcceeeeeccCHH---H
Confidence 1 024555677776553 3 233334455667888888886 665332 23578888887743 3
Q ss_pred CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 489 DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 489 ~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
....-..++.++||+|..-.+- .. ..|...+||.+...+|++-++.|++.|...-++
T Consensus 468 ~~~~sd~Li~~h~iYvQaINyP---------------TV--------~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~ 524 (570)
T KOG1360|consen 468 AKQASDILISKHNIYVQAINYP---------------TV--------ARGTERLRIAPTPHHTPQMMNILVNALLDVWNE 524 (570)
T ss_pred HHHHHHHHHHhcCeEEEeccCC---------------cc--------cccceeeecCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3333456778999998653211 00 145559999999999999999999998765433
No 285
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.55 E-value=2.8e-12 Score=132.49 Aligned_cols=274 Identities=17% Similarity=0.149 Sum_probs=195.2
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC---CC-CC-C--eEEEcCCCchhHHHHHHHHHHhcCCE
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP---FY-SN-P--RLLTVYDHENEAAALMIESSKKRGAR 250 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~---~~-~g-d--~ll~~~e~~s~~~~~~~~~a~~~G~~ 250 (588)
.++..++-..++.+||++++ ..-.-|.|+|+++-+.-..+. .+ .| + ++++... ....+..+++..+.+
T Consensus 119 ~~~e~~~Vnm~~~L~~~~~~-~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~----v~~a~eK~a~yf~v~ 193 (491)
T KOG1383|consen 119 RKLEAECVNMIANLFNAPSD-SCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQN----VHAAFEKAARYFEVE 193 (491)
T ss_pred HHHHHHHHHHHHHHhcCCcc-ccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHH----HHHHHHHHHhhEEEE
Confidence 57888999999999999865 456677888888555444432 11 11 1 1444333 344457888889999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH-cCcEEEEeCCCcC---C-
Q 037063 251 VSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE-KGWHVLLDATALG---S- 324 (588)
Q Consensus 251 v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~-~g~~vvvDaa~~~---~- 324 (588)
++.||++..+.++|+.++.+.++ ++|.+++....+.++|.+-|+++| +++.+ +++++++|++... |
T Consensus 194 l~~V~~~~~~~~~D~~k~~~~i~--------eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~ 265 (491)
T KOG1383|consen 194 LREVPLDEGDYRVDPGKVVRMID--------ENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPA 265 (491)
T ss_pred EEeeeccccceEecHHHHHHHhc--------cceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccc
Confidence 99999998889999999999999 899999999999999999999999 88888 9999999998332 2
Q ss_pred --CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchh--c--ccCCCCCCCceEeeecCCCcccccccccccc
Q 037063 325 --KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSAS--V--LSGSTSSVSTIMGIEPSFSEIIELETLDESS 398 (588)
Q Consensus 325 --~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~--~--l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~ 398 (588)
.+..++|+..-.+--+.++.|| +|+.|.|+|+++-|.+-.. . ...-|.|| ... .+ .+ .
T Consensus 266 ~~~~~~~fdFr~p~V~Sisa~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg--~y~-s~------Tl------n 329 (491)
T KOG1383|consen 266 GYLNEEEFDFRVPGVTSISADGHK-YGLAPAGSSWVLYRNKELLPHQLFFHTDWLGG--IYA-SP------TL------N 329 (491)
T ss_pred cccCccccccCCCCceeEeeccce-eeeeecCcEEEEEcccccccceEEEeccccCc--ccc-Cc------cc------c
Confidence 2244667666667779999999 5544999999887765321 1 12223332 100 00 00 1
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEE
Q 037063 399 QSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAF 478 (588)
Q Consensus 399 f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f 478 (588)
|+..| ..+ ++..+++-.+-..|..+..+.+...+..|++++.+ ++.+.|+++ |.++|
T Consensus 330 gSR~g----~~v---a~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~---------i~~i~i~gk-------p~vs~ 386 (491)
T KOG1383|consen 330 GSRPG----SQV---AAQWAALMSLGEEGYRENTQNIVETARKLREGIEN---------IKGIKIVGK-------PLVSF 386 (491)
T ss_pred cCCcc----cHH---HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhc---------cccceecCC-------CcEEE
Confidence 11122 122 44445666666667888888899999999999998 478999986 66777
Q ss_pred EeecCCCCCcCHHHHHHHHHhCCcEec
Q 037063 479 NVFDWNGTRIDPALVQKLADRHNISLS 505 (588)
Q Consensus 479 ~~~~~~g~~i~~~~v~~~l~~~gI~v~ 505 (588)
...+.+. ++-.++..+|.+.|..+-
T Consensus 387 ~~~~s~~--~~i~elsd~l~~~GW~ln 411 (491)
T KOG1383|consen 387 ILFGSND--VNIFELSDLLRKKGWILN 411 (491)
T ss_pred EEccCCc--cchhhhhHHHHhcCcCcc
Confidence 7776443 666778899999988764
No 286
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.54 E-value=1.3e-12 Score=132.71 Aligned_cols=306 Identities=18% Similarity=0.175 Sum_probs=199.1
Q ss_pred HHHHHHHHHHhC------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 182 SKIRKRIMDFMN------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 182 ~~~r~~ia~~lg------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
...|+.+|+|+. ++-+...||.|.|+|.|++.++-.+ -.|||..+++.+|.... -+.+.-+.|++++.|.
T Consensus 124 ~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcL-adpgdafLvPtPyY~gf---drdl~~rTgveivpv~ 199 (471)
T KOG0256|consen 124 PSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCL-ADPGDAFLVPTPYYPGF---DRDLRWRTGVEIVPVH 199 (471)
T ss_pred hHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHh-cCCCceeeecCCCCCcc---cccceeccCceEEEEE
Confidence 367777777763 2223334999999999999999998 78999988777765422 2444456899999999
Q ss_pred ccCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCcCCC-----
Q 037063 256 FAWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATALGSK----- 325 (588)
Q Consensus 256 ~~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~~~~----- 325 (588)
+... +.+++.+.|+.++.+. ++...+.+=|++++++||.|+.++-+++ ..|.+++++||+|..-+..+
T Consensus 200 c~Ss~~f~itv~alE~A~~~A--~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~ 277 (471)
T KOG0256|consen 200 CSSSNGFQITVEALEAALNQA--RKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSE 277 (471)
T ss_pred eecCCCccccHHHHHHHHHHH--HHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccC
Confidence 8754 4579999999999842 3344677889999999999999998885 67889999999998733310
Q ss_pred --CC----CCCCCCCCCCc--EEEeccCccCCCCCCceEEEEEeCcch-hcccCC-CCCCCceEeeecCCCccccccccc
Q 037063 326 --DM----DTLGLSLFKPD--FLICSFYKIFGENPSGFGCLFVKKSSA-SVLSGS-TSSVSTIMGIEPSFSEIIELETLD 395 (588)
Q Consensus 326 --d~----~~l~l~~~~~D--~vv~S~~K~~G~~P~G~G~L~v~~~~~-~~l~~~-~~g~~g~v~~~~~~~~~~~~~~~~ 395 (588)
.+ ....+ .+| -++.|..|=||.+.-.+|++|..++.. ....+. .++ .++
T Consensus 278 F~Sv~ev~~~~~~---~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~---~vS--------------- 336 (471)
T KOG0256|consen 278 FRSVLEVRKDPHL---DPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFG---LVS--------------- 336 (471)
T ss_pred ceEHHHHhhcccc---CCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhcc---CCc---------------
Confidence 00 11111 133 478899999997556699999887643 222222 121 111
Q ss_pred ccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE
Q 037063 396 ESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS 475 (588)
Q Consensus 396 ~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i 475 (588)
+..+.. ++.+..--++.+.. +.+..+|++.--+++.++|+++ |+|-++ ..+++
T Consensus 337 ----------s~tQ~~-la~LLSD~~f~~~y-l~en~~Rl~~rh~~~~~gLk~l-------gI~cl~--------s~AGl 389 (471)
T KOG0256|consen 337 ----------SQTQYL-LASLLSDEEFTREY-LRENNKRLRIRHRYIVEGLKAL-------GIPCLK--------SNAGL 389 (471)
T ss_pred ----------HHHHHH-HHHHhchHHHHHHH-HHHHHHHHHHHHHHHHhhHHhc-------CCceee--------cCCee
Confidence 111110 12222222233333 6777888888889999999998 666443 34566
Q ss_pred EEEE-eec--CCCCCcCH--HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCC
Q 037063 476 LAFN-VFD--WNGTRIDP--ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLT 550 (588)
Q Consensus 476 v~f~-~~~--~~g~~i~~--~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~ 550 (588)
..+. +.. .+.. ... +...+++++-++.+++|..|+ | ...| +.|+.|.-+
T Consensus 390 F~wvDlr~lL~s~t-fe~El~Lw~~i~~~vklnlSpG~s~~--------------------C--~EpG--WFRvcFAn~- 443 (471)
T KOG0256|consen 390 FCWVDLRKLLTSLT-FEGELELWERILDNVKLNLSPGSSCH--------------------C--HEPG--WFRVCFANM- 443 (471)
T ss_pred EEEEEhHHhcCcCC-hHHHHHHHHHHHHhhccccCCCCcce--------------------e--cCCC--eEEEEeccC-
Confidence 6653 211 0111 222 235677787799999997663 0 0245 999996532
Q ss_pred CHHHHHHHHHHHHHhhh
Q 037063 551 NFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 551 t~eDv~~li~~l~~~l~ 567 (588)
.++.++-.++.|+.|++
T Consensus 444 ~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 444 SEETLEVAMRRLKQFLD 460 (471)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 33445547888888877
No 287
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.53 E-value=1.1e-12 Score=127.53 Aligned_cols=295 Identities=13% Similarity=0.027 Sum_probs=197.2
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
.++...+..+||+|.+-. + .++-+++-.|..-+.+++ +.|.|-|+++.-.|++++.+ ..+|++++
T Consensus 111 q~iHk~LE~kiAqfh~rE---D-~ilypscfdANag~feai-l~pedAvfSDeLNhASIIdG-irLckry~--------- 175 (417)
T KOG1359|consen 111 QDIHKLLESKIAQFHGRE---D-TILYPSCFDANAGAFEAI-LTPEDAVFSDELNHASIIDG-IRLCKRYR--------- 175 (417)
T ss_pred hHHHHHHHHHHHHHhCCC---c-eEEeccccccchHHHHHh-cChhhhhhccccccchhhhh-hHHHhhhc---------
Confidence 578889999999999873 2 444455555556666777 78888888887777778888 46777443
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC-------CCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK-------DMDT 329 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~-------d~~~ 329 (588)
.+|.-+++..+.+ ..+.+.+||+...+-++.|-+.|+++| ++++++|.++++|.++..++ .-+.
T Consensus 176 ----h~dv~~l~~~l~~----a~k~r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~ 247 (417)
T KOG1359|consen 176 ----HVDVFDLEHCLIS----ACKMRLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEE 247 (417)
T ss_pred ----cchhHHHHHHHHH----hhhheEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHH
Confidence 2344556655541 223678999999999999999999999 99999999999999976531 0122
Q ss_pred CCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccc
Q 037063 330 LGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISG 409 (588)
Q Consensus 330 l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~ 409 (588)
++. .-++|++.....|.+| ..-.|+....+.+++.|+..... . .|+..=-|.+.+
T Consensus 248 ~~v-m~~vdiinsTLgKAlG--ga~GGyttgp~~li~llrqr~Rp---------------------y-lFSnslppavV~ 302 (417)
T KOG1359|consen 248 FGV-MGDVDIINSTLGKALG--GASGGYTTGPKPLISLLRQRSRP---------------------Y-LFSNSLPPAVVG 302 (417)
T ss_pred hCC-CCcceehhhhhhhhhc--CCCCCCccCChhHHHHHHhcCCc---------------------e-eecCCCChhhhh
Confidence 232 2348999999999888 22348888888877655432110 0 220000011111
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcC
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRID 489 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~ 489 (588)
...++++.+-. -..+..+.....+++++.+.. .++.|-+.. -||..+.+.+.. -
T Consensus 303 -----~a~ka~dllm~--s~~~i~~~~a~~qrfr~~me~----------aGftIsg~~-----hPI~pv~lGda~----l 356 (417)
T KOG1359|consen 303 -----MAAKAYDLLMV--SSKEIQSRQANTQRFREFMEA----------AGFTISGAS-----HPICPVMLGDAR----L 356 (417)
T ss_pred -----hhHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHh----------cCceecCCC-----CCccceecccHH----H
Confidence 22356665533 366777888889999998876 468887632 367777776621 1
Q ss_pred HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 490 PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 490 ~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
.....+.+-+.||+|-.-.. | .. ..|...|||.+...+|+||||++++++.+..+..
T Consensus 357 A~~~ad~lLk~Gi~Vigfs~--P-------------vV--------P~gkariRVqiSAaHt~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 357 ASKMADELLKRGIYVIGFSY--P-------------VV--------PKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred HHHHHHHHHhcCceEEeecC--C-------------cC--------CCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhh
Confidence 33455666678998753211 0 00 1344489999999999999999999998876643
No 288
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.53 E-value=3.6e-11 Score=133.25 Aligned_cols=387 Identities=13% Similarity=0.044 Sum_probs=225.3
Q ss_pred eeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHh
Q 037063 113 VCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFM 192 (588)
Q Consensus 113 vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~l 192 (588)
-|+-|.-+.+.+.+++-.+...+. |++-. .|+ .+ -....++.++-+.+++++
T Consensus 85 ry~ghm~~~~~~paila~~~a~~~-----N~n~~-----~~e----------~S--------P~~t~lE~~vi~~la~l~ 136 (608)
T TIGR03811 85 RYWGHMNSETLMPAILAYNYAMLW-----NGNNV-----AYE----------SS--------PATSQMEEEVGKEFATLM 136 (608)
T ss_pred ceEEECcCCCCHHHHHHHHHHHHh-----CCCCC-----ccc----------cC--------chHHHHHHHHHHHHHHHh
Confidence 588888888888887766543332 22100 011 01 113788999999999999
Q ss_pred CCCCCCceEEEecCHHHHHHH---HHHh---CCC--C-------------------------------------------
Q 037063 193 NISEDDYTLVFTANQSSAFKL---LAES---YPF--Y------------------------------------------- 221 (588)
Q Consensus 193 ga~~~e~~vvft~g~T~al~l---v~~s---~~~--~------------------------------------------- 221 (588)
|.++. .-+||+|+|.|+-. +++. +|+ +
T Consensus 137 G~~~~--~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~ 214 (608)
T TIGR03811 137 GYKNG--WGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSAR 214 (608)
T ss_pred CCCCC--CeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccc
Confidence 99754 37799999998643 3322 110 0
Q ss_pred CCC------eEEEcCC-CchhHHHHHHHHHHhcCC---EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeC
Q 037063 222 SNP------RLLTVYD-HENEAAALMIESSKKRGA---RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPL 291 (588)
Q Consensus 222 ~gd------~ll~~~e-~~s~~~~~~~~~a~~~G~---~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~ 291 (588)
+|. +++++.. |+| | .+.|.-.|. .|+.||++ +++++|+++|++.|.+. ......+-.|+.+.
T Consensus 215 ~g~~~~~~~~vl~s~~aHyS----~-~KAa~ilGlG~~~vv~VpvD-~~~rmd~~~L~~~I~~~--~~~g~p~~~VVata 286 (608)
T TIGR03811 215 SGKDLQKLGKWLVPQTKHYS----W-LKAADIIGIGLDQVIPVPVD-SNYRMDINELEKIIRKL--AAEKTPILGVVGVV 286 (608)
T ss_pred cccccccceEEEECCCccHH----H-HHHHHHcCCCcccEEEeecC-CCCcCCHHHHHHHHHHH--HhcCCCeEEEEEEc
Confidence 000 3445555 443 2 456666787 68999998 78999999999999731 12223456788889
Q ss_pred CCCCCCccCCHHHH-HHH---HHcCc--EEEEeCCCcCC---CCCC------CC------------------CC------
Q 037063 292 QSKVTGARYSYMWM-SVA---AEKGW--HVLLDATALGS---KDMD------TL------------------GL------ 332 (588)
Q Consensus 292 ~sn~tG~~~pl~~I-~~a---~~~g~--~vvvDaa~~~~---~d~~------~l------------------~l------ 332 (588)
.++.+|.+-|+++| ++| +++|+ +++||||-.+. .-++ ++ .+
T Consensus 287 GTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~ 366 (608)
T TIGR03811 287 GSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYN 366 (608)
T ss_pred CCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHH
Confidence 99999999999999 887 66887 69999984331 0000 00 00
Q ss_pred ---CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhc-cc---CCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 333 ---SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASV-LS---GSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 333 ---~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~-l~---~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
...++|.+++.+||++.. |.++|++++|+..+.. +. ++.... +. ..+. .+. .+-..|+.
T Consensus 367 ~l~gle~ADSItvDpHK~g~~-Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~-~~--~~p~-----~~g-----~~~legSR 432 (608)
T TIGR03811 367 AYKAISEAESVTIDPHKMGYI-PYSAGGIVIQDIRMRDVISYFATYVFEK-GA--DIPA-----LLG-----AYILEGSK 432 (608)
T ss_pred HHhcCcCceEEEeCccccccc-CCCeEEEEEeCHHHHHHHhcCcchhccc-cc--cCcc-----ccc-----ccceecCC
Confidence 124599999999998876 9999999999874322 11 111100 00 0000 000 00011221
Q ss_pred -CccchhhHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEE--eCCCCCCCcccEEEEEe
Q 037063 406 -SISGVSSKLVECKGLDHA--DALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRI--YGPKVMFDRGPSLAFNV 480 (588)
Q Consensus 406 -~~~~~~~~~al~~aL~~l--~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i--~~p~~~~~rg~iv~f~~ 480 (588)
...+ +++..+++.+ ..-|+.++.++...+++++.+.|.++...- +.+.+++ ..+ +.-++|+|.+
T Consensus 433 ~ga~A----lklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~---~~~~~el~~~~~----pdlniV~Fr~ 501 (608)
T TIGR03811 433 AGATA----ASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKV---GDKEIEVHPLTK----PDFNMVDYVF 501 (608)
T ss_pred ccHHH----HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhccccc---CCCCeeEEecCC----CCcceEEEEE
Confidence 1111 3455677766 555799999999999999999998842100 0133444 333 3468999987
Q ss_pred ecCCCCC-cCHHHH-HHHHHhCCc----------EeccccccCcccccchHHHHHHHHhhhcCCC-C---CcCCccEEEE
Q 037063 481 FDWNGTR-IDPALV-QKLADRHNI----------SLSCGFLQNIFFSGEYEQERVRVLETRSGTN-E---TRSGVSVVTA 544 (588)
Q Consensus 481 ~~~~g~~-i~~~~v-~~~l~~~gI----------~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~-~---~~~g~~~vRv 544 (588)
......- -....+ .++.++..+ .++.-.++...+.+.. ..+.++.+.. . +...+.++|.
T Consensus 502 ~~~g~~~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~-----~~~~~~~~~~~~~~~~~~~~~~lr~ 576 (608)
T TIGR03811 502 NEKGNDDLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSP-----FAFVNSLGFSDEEWQRAGKVTILRA 576 (608)
T ss_pred ecCCCccHHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhH-----HHHHHHcCCChhhhccCCceEEEEE
Confidence 5322111 112222 333333332 2222223322222221 1122221111 1 1234459999
Q ss_pred ec--CCCCCHHHHHHHHHHHHHhhh
Q 037063 545 AL--GCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 545 Sl--g~~~t~eDv~~li~~l~~~l~ 567 (588)
++ .+.++.+-++.++..|++.+.
T Consensus 577 ~~m~p~~~~~~~~~~~~~~~~~~~~ 601 (608)
T TIGR03811 577 SVMTPYMNDKENFDEYAPKIKAAMQ 601 (608)
T ss_pred EecCcccCChhhHHHHHHHHHHHHH
Confidence 97 477777888888888877544
No 289
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.51 E-value=1.1e-11 Score=133.12 Aligned_cols=332 Identities=10% Similarity=0.067 Sum_probs=195.8
Q ss_pred CCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
++..|+|.++ .|.-.+.+.+++.+.+.. ... . .+.. ..+...+
T Consensus 38 dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~-~~~-~---------------------~~~~--------~~~~~~~ 86 (403)
T PRK05093 38 QGKEYIDFAGGIAVTALGHCHPALVKALKEQGEK-LWH-I---------------------SNVF--------TNEPALR 86 (403)
T ss_pred CCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHh-cCc-c---------------------cCcc--------CCHHHHH
Confidence 6788999866 577778888887665532 100 0 0000 0233457
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----CCCC-eEE-EcCCCchhHHHHHHHHH------H---h
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----YSNP-RLL-TVYDHENEAAALMIESS------K---K 246 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~~gd-~ll-~~~e~~s~~~~~~~~~a------~---~ 246 (588)
+.++++++++. + .+.|+.++++|+..++.... + ..+. +|+ ....||...... ..+. . .
T Consensus 87 l~~~l~~~~~~--~--~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~-~~~~~~~~~~~~~~~ 161 (403)
T PRK05093 87 LAKKLIDATFA--E--RVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFT-VSVGGQPKYSDGFGP 161 (403)
T ss_pred HHHHHHhhCCC--C--EEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhh-HhhcCChhhhhcCCC
Confidence 88888887754 2 49999999998777765321 1 1233 344 666677633322 1110 0 0
Q ss_pred cCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCC
Q 037063 247 RGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATA 321 (588)
Q Consensus 247 ~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~ 321 (588)
....+..++.+ |.+++++.+. +++++|++.-+++..|...| +++| ++|+++|+++|+|.++
T Consensus 162 ~~~~~~~~~~~------d~~~l~~~l~--------~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~ 227 (403)
T PRK05093 162 KPADITHVPFN------DLAAVKAVID--------DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQ 227 (403)
T ss_pred CCCCcEEeCCC------CHHHHHHHhc--------CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 11233344332 6788988887 67889998855554455444 7778 9999999999999995
Q ss_pred cC-CCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccc
Q 037063 322 LG-SKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESS 398 (588)
Q Consensus 322 ~~-~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~ 398 (588)
.. +.+ ..........+|+ .|+.|.+|. ...+|+++.++++++.+.....+.
T Consensus 228 ~g~g~~g~~~~~~~~~~~pdi--~s~sK~l~~-G~rig~vv~~~~i~~~l~~~~~~~----------------------- 281 (403)
T PRK05093 228 TGMGRTGDLFAYMHYGVTPDI--LTSAKALGG-GFPIGAMLTTAEIASHFKVGTHGS----------------------- 281 (403)
T ss_pred hCCCCCccchhhhhcCCCCCE--EEecccccC-CcceEEEEEcHHHHhhcCCCCCCC-----------------------
Confidence 52 211 1111111223784 477898772 344999999998877665432210
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEE
Q 037063 399 QSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAF 478 (588)
Q Consensus 399 f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f 478 (588)
..+..++.+ ++..++|+.+.. +.+.++.+...+++.+.|.++... .+.+. .. ...|.++.+
T Consensus 282 --t~~~~~~~~----~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~-----~~~~~--~~---~~~G~~~~~ 342 (403)
T PRK05093 282 --TYGGNPLAC----AVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQK-----YGVFS--EI---RGMGLLIGA 342 (403)
T ss_pred --CCCCCHHHH----HHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhh-----CCCeE--eE---eeCceEEEE
Confidence 011112222 444566776643 345677778888888888875211 11110 00 012445555
Q ss_pred EeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHH
Q 037063 479 NVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRL 558 (588)
Q Consensus 479 ~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~l 558 (588)
.+... ..-....+...|.++||.+..+ |...||+++++..+.+||+.+
T Consensus 343 ~l~~~--~~~~~~~~~~~l~~~Gv~v~~~------------------------------g~~~lRl~~~~~~~~~~i~~~ 390 (403)
T PRK05093 343 ELKPQ--YKGRARDFLNAAAEEGVMVLVA------------------------------GPDVLRFAPSLVIEEADIDEG 390 (403)
T ss_pred EecCc--chhHHHHHHHHHHHCCeEEecC------------------------------CCCEEEEeCCCCCCHHHHHHH
Confidence 55321 0012345556666689987642 112899999999899999999
Q ss_pred HHHHHHhhhh
Q 037063 559 WAFVSRFLDA 568 (588)
Q Consensus 559 i~~l~~~l~~ 568 (588)
++.|.++++.
T Consensus 391 ~~~l~~~l~~ 400 (403)
T PRK05093 391 LARFEKAVAK 400 (403)
T ss_pred HHHHHHHHHH
Confidence 9999998854
No 290
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.51 E-value=5.3e-12 Score=141.01 Aligned_cols=238 Identities=14% Similarity=0.023 Sum_probs=152.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
...+.++.+..|+.||++ .+...|+|+|.++..++.+. .++||.||++.+.|-+.+.. .....|++.+++...
T Consensus 173 eG~i~eAq~~AA~~fgAd---~tyFlvNGTS~gn~a~i~a~-~~~Gd~VLvdRN~HKSv~hg---aLiLsGa~PVYl~P~ 245 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNAD---KTYFVLNGTSASNKVVTNAL-LTPGDLVLFDRNNHKSNHHG---ALIQAGATPVYLETA 245 (720)
T ss_pred ChHHHHHHHHHHHHhCCC---ceEEEeCChhHHHHHHHHHh-cCCCCEEEeecccHHHHHHH---HHHHcCCeEEEeecc
Confidence 456789999999999996 45889999999999999998 89999999988888645543 123469999999765
Q ss_pred CCC----CccCHHH-----HHHHHhhh-ccccC-CCcceEEEEeCCCCCCCccCCHHHH-HH-HHHcCcEEEEeCCCcC-
Q 037063 258 WPN----LRIHSGK-----LMKKIVGK-RKKKK-KKKRGLFVFPLQSKVTGARYSYMWM-SV-AAEKGWHVLLDATALG- 323 (588)
Q Consensus 258 ~~~----~~i~~e~-----l~~~i~~~-~~~~~-~~~t~Lv~~~~~sn~tG~~~pl~~I-~~-a~~~g~~vvvDaa~~~- 323 (588)
... +.|+.++ |+++|.+. ..+.. ++..++++++.+ +..|..+++++| +. ++.++ ++++|.|+..
T Consensus 246 ~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah 323 (720)
T PRK13578 246 RNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHLCD-YILFDSAWVGY 323 (720)
T ss_pred ccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhccCC-cEEEeCcchhh
Confidence 421 2356544 88888731 00111 122488888776 559999999999 76 68888 9999999544
Q ss_pred ----CC--CCCCCCCCCCCCc----EEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccc
Q 037063 324 ----SK--DMDTLGLSLFKPD----FLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELET 393 (588)
Q Consensus 324 ----~~--d~~~l~l~~~~~D----~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~ 393 (588)
|. ++.+..+ ..++| +++-|.||.++. -+....|.++.+.++.-+... . ...+..
T Consensus 324 ~~F~p~~~~~p~~al-~~GaD~p~i~v~QStHKtL~a-lTQaS~LHvk~~~i~g~~~~v----------~----~~r~~~ 387 (720)
T PRK13578 324 EQFIPMMADCSPLLL-ELNENDPGIFVTQSVHKQQAG-FSQTSQIHKKDNHIKGQARYC----------P----HKRLNN 387 (720)
T ss_pred hccCcccccCChhhh-hcCCCCCCeEEEEChhhcchh-hhhHhhhhcCCcccccccccC----------C----HHHHHH
Confidence 21 1111111 23478 999999998773 566777777665432100000 0 000000
Q ss_pred ccccccccCCCCCccchhhHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHH
Q 037063 394 LDESSQSKFPESSISGVSSKLVECKGLDHADA-LGLILISNRARYLINWLANAL 446 (588)
Q Consensus 394 ~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~-~G~~~i~~r~~~L~~~l~~~L 446 (588)
....+ ...+|+++- ++++..|..++.. .| +.+.++...++..++++|
T Consensus 388 -al~m~-qSTSPsY~L---mASLDva~~~m~~~~G-~~l~~~~i~~a~~~R~~l 435 (720)
T PRK13578 388 -AFMLH-ASTSPFYPL---FAALDVNAKMHEGESG-RRLWMECVKLGIEARKLI 435 (720)
T ss_pred -HHHHH-cCCChHHHH---HHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHH
Confidence 00011 233344433 3666666666664 45 556666777777788877
No 291
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.47 E-value=6.7e-11 Score=132.15 Aligned_cols=311 Identities=13% Similarity=0.051 Sum_probs=197.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
.....++.+.+|+.||++ .+...|+|+|.++++++.+. +++||.||++...|-+.+..+ ...|++.++++..
T Consensus 194 ~G~i~eAe~~aA~~fgAd---~tyfvvNGTS~~n~av~~a~-~~~Gd~VLvdRN~HKSv~~aL----ilsga~PVYl~P~ 265 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAE---QSYIVTNGTSTSNKIVGMYA-APAGSTLLIDRNCHKSLAHLL----MMSDVVPIWLKPT 265 (713)
T ss_pred ChHHHHHHHHHHHHhCCC---cEEEEeCChHHHHHHHHHHh-cCCCCEEEeecccHHHHHHHH----HHcCCeeEEeccc
Confidence 456789999999999996 45888999999999999998 999999999888876555443 4569999999765
Q ss_pred CCC----CccCH-----HHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEE-EEeCCCcC---
Q 037063 258 WPN----LRIHS-----GKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHV-LLDATALG--- 323 (588)
Q Consensus 258 ~~~----~~i~~-----e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~v-vvDaa~~~--- 323 (588)
... +.|+. +.|+++|.+. ...++++.++++.+ +..|..+++++| +.+ |+.+ ++|.|+..
T Consensus 266 ~n~~Gi~g~I~~~~~~~e~I~~~i~~~---p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~ 338 (713)
T PRK15399 266 RNALGILGGIPRREFTRDSIEEKVAAT---TQAQWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTH 338 (713)
T ss_pred ccccCCcCCCChhhccHHHHHHHHHhC---CCcCCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEeccchhhhh
Confidence 321 23455 8899999731 11133467777766 679999999999 777 6776 69999543
Q ss_pred --C--CCCCCCCCCCCCCcEE---EeccCccCCCCCCceEEEEEeCcch-hcccCCCCCCCceEeeecCCCccccccccc
Q 037063 324 --S--KDMDTLGLSLFKPDFL---ICSFYKIFGENPSGFGCLFVKKSSA-SVLSGSTSSVSTIMGIEPSFSEIIELETLD 395 (588)
Q Consensus 324 --~--~d~~~l~l~~~~~D~v---v~S~~K~~G~~P~G~G~L~v~~~~~-~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~ 395 (588)
| .+...+.. ..++|.+ +-|.||.++. -+-...|.++...- ++++..+ .
T Consensus 339 F~p~~~~~sam~~-~~~aD~~i~~tQStHKtL~a-lTQaS~iHvk~~vd~~~~n~a~----~------------------ 394 (713)
T PRK15399 339 FHPIYQGKSGMSG-ERVPGKVIFETQSTHKMLAA-FSQASLIHIKGEYDEETFNEAF----M------------------ 394 (713)
T ss_pred cCcccCCcChhhC-CCCCCeeeeeeeehhccccc-cchheeeeecCCCCHHHHHHHH----H------------------
Confidence 2 11222311 1135655 8999997763 56678887765321 1111111 0
Q ss_pred ccccccCCCCCccchhhHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCC------
Q 037063 396 ESSQSKFPESSISGVSSKLVECKGLDHADA-LGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKV------ 468 (588)
Q Consensus 396 ~~~f~e~GT~~~~~~~~~~al~~aL~~l~~-~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~------ 468 (588)
.+ ...+|+++- ++++..|..+++. .| +.+.++...++..++++|.++...- +++ .++++.|+.
T Consensus 395 --m~-~STSPsY~L---mASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~--~~w-~f~~~~~~~~~~~~~ 464 (713)
T PRK15399 395 --MH-TSTSPSYPI---VASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREES--DGW-FFDIWQPENVDEAEC 464 (713)
T ss_pred --HH-cCCCcHHHH---HHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccc--cCc-eeeecCccccCCccc
Confidence 11 223344433 4777777777774 45 5567777778888888888752100 000 034443310
Q ss_pred -------C------------CCcccEEEEEeecC--C----CCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHH
Q 037063 469 -------M------------FDRGPSLAFNVFDW--N----GTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERV 523 (588)
Q Consensus 469 -------~------------~~rg~iv~f~~~~~--~----g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~ 523 (588)
. .-..-=+++..++. + ...++...+.+.|+++||.+--.
T Consensus 465 w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~---------------- 528 (713)
T PRK15399 465 WPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKT---------------- 528 (713)
T ss_pred eecCCCcccccccccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEec----------------
Confidence 0 00111223333321 1 12377888999999999986421
Q ss_pred HHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 524 RVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 524 ~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
+...|=+=++...|.+++++|+++|.+|-+
T Consensus 529 --------------d~~~vL~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 529 --------------GPYNLLFLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred --------------CCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 111455555667799999999999998843
No 292
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.46 E-value=2.2e-11 Score=135.96 Aligned_cols=311 Identities=12% Similarity=0.039 Sum_probs=197.9
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
.....++.+.+|+.||++ .+...|.|+|.+++.++.+. ..+||.||++...|-+.+..+ ...|++.++++..
T Consensus 194 ~G~i~eAe~~AA~~fgAd---~tyfvvNGTS~~n~av~~a~-~~~Gd~VLvdRN~HKSv~haL----ilsga~PVYl~P~ 265 (714)
T PRK15400 194 SGPHKEAEEYIARVFNAD---RSYMVTNGTSTANKIVGMYS-APAGSTVLIDRNCHKSLTHLM----MMSDVTPIYFRPT 265 (714)
T ss_pred ChHHHHHHHHHHHHhCCC---cEEEEeCchHHHHHHHHHHh-cCCCCEEEeecccHHHHHHHH----HHcCCeEEEeccc
Confidence 456789999999999996 45888999999999999998 899999999888876455443 4569999999765
Q ss_pred CCC----CccC-----HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcC----
Q 037063 258 WPN----LRIH-----SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALG---- 323 (588)
Q Consensus 258 ~~~----~~i~-----~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~---- 323 (588)
... +.|+ .+.|+++|.+. ...+++..++++.+ +..|..+++++| +.++.++ +++|.|+..
T Consensus 266 rn~~Gi~g~I~~~~~~~e~i~~~i~~~---p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F 339 (714)
T PRK15400 266 RNAYGILGGIPQSEFQHATIAKRVKET---PNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNF 339 (714)
T ss_pred ccccCCccCCCccccCHHHHHHHHHhC---ccccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccchhhhcc
Confidence 422 2345 88999999731 11123336667665 679999999999 9999887 799999544
Q ss_pred -CC--CCCCCCCCCCCCc--EEEeccCccCCCCCCceEEEEEeCcch-hcccCCCCCCCceEeeecCCCccccccccccc
Q 037063 324 -SK--DMDTLGLSLFKPD--FLICSFYKIFGENPSGFGCLFVKKSSA-SVLSGSTSSVSTIMGIEPSFSEIIELETLDES 397 (588)
Q Consensus 324 -~~--d~~~l~l~~~~~D--~vv~S~~K~~G~~P~G~G~L~v~~~~~-~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~ 397 (588)
|. +...+......-| +++-|.||.++. -+-...|.++..+- ++++..+ .
T Consensus 340 ~p~~~~~sam~~ga~~~~~i~vtQStHKtL~a-lTQaS~LHvkg~vd~~~~n~a~------------------------~ 394 (714)
T PRK15400 340 SPIYEGKCGMSGGRVEGKVIYETQSTHKLLAA-FSQASMIHVKGDVNEETFNEAY------------------------M 394 (714)
T ss_pred CcccCCcChhhcCCCCCCceEEEEchhhcccc-hhHHhHHHHcCCCCHHHHHHHH------------------------H
Confidence 21 1222321110015 999999997763 44555555543210 0111100 0
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCe--EEEeCCCCC-----
Q 037063 398 SQSKFPESSISGVSSKLVECKGLDHADA-LGLILISNRARYLINWLANALMNLHHPHSETGIPL--VRIYGPKVM----- 469 (588)
Q Consensus 398 ~f~e~GT~~~~~~~~~~al~~aL~~l~~-~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~--v~i~~p~~~----- 469 (588)
.+ ...+|+++- ++++..|..+++. .| +.+.++...++..++++|.+++.. ... ++++.|...
T Consensus 395 m~-~STSPsY~l---~ASLD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~-----~~~w~~~~~~~~~~~~~~~ 464 (714)
T PRK15400 395 MH-TTTSPHYGI---VASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTE-----SDGWFFDVWQPDHIDTTEC 464 (714)
T ss_pred HH-cCCCcHHHH---HHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhCCCc-----ccCceEEecChhhcccchh
Confidence 11 223344433 4777777777764 45 566777778888889988886310 001 445443210
Q ss_pred --------------------CCcccEEEEEeec--CCC----CCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHH
Q 037063 470 --------------------FDRGPSLAFNVFD--WNG----TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERV 523 (588)
Q Consensus 470 --------------------~~rg~iv~f~~~~--~~g----~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~ 523 (588)
.-..-=+++..++ .+| ..++...+.+.|+++||.+--.
T Consensus 465 w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~---------------- 528 (714)
T PRK15400 465 WPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKT---------------- 528 (714)
T ss_pred cccCccccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEec----------------
Confidence 0001122333322 122 2367888999999999986421
Q ss_pred HHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 524 RVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 524 ~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
+...|=+=++..+|.+++++|+++|.+|-+
T Consensus 529 --------------d~~~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 529 --------------GPYNLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred --------------CCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 112455556677899999999999998833
No 293
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.46 E-value=2e-11 Score=131.26 Aligned_cols=332 Identities=11% Similarity=0.076 Sum_probs=197.2
Q ss_pred CCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
++..|||..+ .|.-.+.+.+++.+.+..-..... .. ..+...+
T Consensus 37 dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~----------------------~~---------~~~~~~~ 85 (406)
T PRK12381 37 QGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGN----------------------GY---------TNEPVLR 85 (406)
T ss_pred CCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccC----------------------cc---------CCHHHHH
Confidence 6778999866 566677888887666532111000 00 1344567
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----C-CCCeEE-EcCCCchhHHHHHHHHHHhcC-------
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----Y-SNPRLL-TVYDHENEAAALMIESSKKRG------- 248 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~-~gd~ll-~~~e~~s~~~~~~~~~a~~~G------- 248 (588)
+.++++++++. + .++|+.++++|+..++.... + . ...+|+ ....||...... ..+.....
T Consensus 86 la~~l~~~~~~--~--~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~-~~~~~~~~~~~~~~~ 160 (406)
T PRK12381 86 LAKKLIDATFA--D--RVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFT-VSAGGQPKYSQDFAP 160 (406)
T ss_pred HHHHHHhhCCC--C--eEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhH-HhhcCCcccccCCCC
Confidence 88888888754 2 49999999999887776531 1 1 233455 566677633322 11111000
Q ss_pred --CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccC-C---HHHH-HHHHHcCcEEEEeCCC
Q 037063 249 --ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARY-S---YMWM-SVAAEKGWHVLLDATA 321 (588)
Q Consensus 249 --~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~-p---l~~I-~~a~~~g~~vvvDaa~ 321 (588)
..+..++. .|.+++++.+. +++++|++.-++..-|... | +++| ++|+++|+++|+|.++
T Consensus 161 ~~~~~~~~~~------~d~~~l~~~l~--------~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~ 226 (406)
T PRK12381 161 LPPDIRHAAY------NDLNSASALID--------DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ 226 (406)
T ss_pred CCCCeeEeCC------CCHHHHHHhcc--------CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh
Confidence 01222222 26788888886 5788888875544444332 3 4557 8999999999999996
Q ss_pred cC-CCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccc
Q 037063 322 LG-SKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESS 398 (588)
Q Consensus 322 ~~-~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~ 398 (588)
.. +.. .-........+|+ .++.|.+|. ..-+|+++.++++++.+.....+. +
T Consensus 227 tG~gr~G~~~~~~~~~v~pDi--~t~sK~l~g-G~~ig~~~~~~~~~~~~~~~~~~~--t-------------------- 281 (406)
T PRK12381 227 TGVGRTGELYAYMHYGVTPDV--LTTAKALGG-GFPIGAMLTTEKCASVMTVGTHGT--T-------------------- 281 (406)
T ss_pred hCCCCCcchhhhHhhCCCCCE--EEehhhhhC-CCceEEEEEcHHHHhhcCCCCCCC--C--------------------
Confidence 32 211 1010111223786 577897762 344899999988877665422110 0
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEE
Q 037063 399 QSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAF 478 (588)
Q Consensus 399 f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f 478 (588)
| + .+... .++..++|+.+.+ +.+.++.+++.+++.+.|.++... .+.+.-. ...|.++.+
T Consensus 282 ~---~-~~pl~---~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~-----~~~~~~v-----rg~Gl~~~~ 341 (406)
T PRK12381 282 Y---G-GNPLA---SAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINAR-----YGLFSEI-----RGLGLLIGC 341 (406)
T ss_pred C---C-CCHHH---HHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhh-----CCCEEEE-----ecCeEEEEE
Confidence 0 1 11111 1444566766643 467888888999999988876211 1111100 123556666
Q ss_pred EeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHH
Q 037063 479 NVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRL 558 (588)
Q Consensus 479 ~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~l 558 (588)
.+.+... -....+.+.+.++||.+... |...||+++.+..|.+||+++
T Consensus 342 ~l~~~~~--~~~~~~~~~l~~~Gv~v~~~------------------------------g~~~lRl~p~~~~t~~~i~~~ 389 (406)
T PRK12381 342 VLNAEYA--GKAKQISQEAAKAGVMVLIA------------------------------GPNVVRFAPALNISEEEITTG 389 (406)
T ss_pred EecCchh--hHHHHHHHHHHHCCcEEeeC------------------------------CCCEEEEeCCccCCHHHHHHH
Confidence 6543100 12355677788899988531 112899999999999999999
Q ss_pred HHHHHHhhhh
Q 037063 559 WAFVSRFLDA 568 (588)
Q Consensus 559 i~~l~~~l~~ 568 (588)
++.|.+++++
T Consensus 390 ~~~l~~~l~~ 399 (406)
T PRK12381 390 LDRFARACER 399 (406)
T ss_pred HHHHHHHHHH
Confidence 9999998864
No 294
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.45 E-value=3.9e-11 Score=127.18 Aligned_cols=314 Identities=13% Similarity=0.048 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc---
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA--- 257 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~--- 257 (588)
+.++.+.+++++|.+ .+++|+++|.|++++... .+++||+| ....|.... ....+..|+.++.++.+
T Consensus 73 ~~~lE~~va~~~G~~----~av~v~sGT~Al~ll~~l-~l~pGDeV-psn~~f~Tt----~ahIe~~Gav~vDi~~dea~ 142 (450)
T TIGR02618 73 FYHLERTVRELYGFK----YVVPTHQGRGAENLLSQI-AIKPGDYV-PGNMYFTTT----RYHQEKNGATFVDIIIDEAH 142 (450)
T ss_pred HHHHHHHHHHHHCCC----eEEEcCCHHHHHHHHHHh-CCCCcCEE-CCceeHHHH----HHHHHhCCeEEEeeeccccc
Confidence 468999999999985 299999999999987644 48999987 334443311 12125578866666443
Q ss_pred ------CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCC-CccCC---HHHH-HHHHHcCcEEEEeCCCcCC--
Q 037063 258 ------WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVT-GARYS---YMWM-SVAAEKGWHVLLDATALGS-- 324 (588)
Q Consensus 258 ------~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~t-G~~~p---l~~I-~~a~~~g~~vvvDaa~~~~-- 324 (588)
..++.+|+++|+++|+. ....++++|++....|.. |..+| +++| ++|+++|+.||+|+|++.+
T Consensus 143 ~~~~~~p~~GniD~~~Le~aI~~----~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA 218 (450)
T TIGR02618 143 DAQLNIPFKGNVDLKKLQKLIDE----VGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENA 218 (450)
T ss_pred ccccCCCCCCCcCHHHHHHHhcc----ccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhCh
Confidence 24588999999999982 112355677777777766 78866 4667 8999999999999997774
Q ss_pred --CCC---CCCCCCC--------CCCcEEEeccCccCCCCCCceEEEEEeC-cchhcccCC--CCCCCceEeeecCCCcc
Q 037063 325 --KDM---DTLGLSL--------FKPDFLICSFYKIFGENPSGFGCLFVKK-SSASVLSGS--TSSVSTIMGIEPSFSEI 388 (588)
Q Consensus 325 --~d~---~~l~l~~--------~~~D~vv~S~~K~~G~~P~G~G~L~v~~-~~~~~l~~~--~~g~~g~v~~~~~~~~~ 388 (588)
+.. .-.+.+. ..+|.+..|++|-++. |.| |+|..++ +++++++.. .++ |+..
T Consensus 219 ~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~-~~G-G~l~~~d~~l~~k~r~~~~~~e--G~~t-------- 286 (450)
T TIGR02618 219 YFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLV-NIG-GFLCMNDDEMFQSAKELVVVFE--GMPS-------- 286 (450)
T ss_pred hhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCC-CCc-eEEEeCCHHHHHHHHHHhhhcC--Cccc--------
Confidence 100 0111111 1389999999997775 765 6666555 555655443 222 2211
Q ss_pred cccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCC
Q 037063 389 IELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKV 468 (588)
Q Consensus 389 ~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~ 468 (588)
.|...-. .+.++..||+..-. ....++...-+++|.+.|.+. | +.|..|
T Consensus 287 -------------yGgla~r---~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~-------G---vpv~~p-- 335 (450)
T TIGR02618 287 -------------YGGLAGR---DMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAA-------G---VPIVEP-- 335 (450)
T ss_pred -------------cCchhhh---hHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHC-------C---CcccCC--
Confidence 1111111 13455566654322 123334444578888888885 3 444444
Q ss_pred CCCcccEEEEEee----cCCCCCcCHHH-HHHHHHhCCcE-eccccccCcccccchHHHHHHHHhhhcCCCCC-cCCccE
Q 037063 469 MFDRGPSLAFNVF----DWNGTRIDPAL-VQKLADRHNIS-LSCGFLQNIFFSGEYEQERVRVLETRSGTNET-RSGVSV 541 (588)
Q Consensus 469 ~~~rg~iv~f~~~----~~~g~~i~~~~-v~~~l~~~gI~-v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~-~~g~~~ 541 (588)
..|.+|-+... ...++...... ...+..+.||. +-.|.+......+ .+.. ......
T Consensus 336 --~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~---------------~~~~~~~~~el 398 (450)
T TIGR02618 336 --VGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNV---------------TGEHHRPKLEL 398 (450)
T ss_pred --CCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCC---------------CCcccCCccce
Confidence 34566666542 22222233333 34555677884 2233321100000 0000 112348
Q ss_pred EEEecC--CCCCHHHHHHHHHHHHHhhhhh
Q 037063 542 VTAALG--CLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 542 vRvSlg--~~~t~eDv~~li~~l~~~l~~~ 569 (588)
||+.+. .| |.+.++..++.|..+.+.-
T Consensus 399 ~rlaiprr~y-t~~h~~~v~~~~~~~~~~~ 427 (450)
T TIGR02618 399 VRLTIPRRVY-TYAHMDVVADGIIKLYKHR 427 (450)
T ss_pred eeeccccccc-cHhHHHHHHHHHHHHHhhH
Confidence 999885 44 5699999999998865543
No 295
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.45 E-value=9.6e-11 Score=126.10 Aligned_cols=347 Identities=10% Similarity=0.054 Sum_probs=197.4
Q ss_pred CCCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|.++..|||..+. |--.+.+.+++.+.+..... .+ +. .. ..+..
T Consensus 31 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~--~~---------------------~~--~~-----~~~~~ 80 (412)
T TIGR02407 31 DEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGI--IH---------------------SL--DM-----ATEAK 80 (412)
T ss_pred eCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccc--ee---------------------cc--cc-----CcHHH
Confidence 3468899998554 77788999988766642110 00 00 00 12344
Q ss_pred HHHHHHHHHHhCCCC-CCceEEEe-cCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHH----h--cC---
Q 037063 182 SKIRKRIMDFMNISE-DDYTLVFT-ANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSK----K--RG--- 248 (588)
Q Consensus 182 ~~~r~~ia~~lga~~-~e~~vvft-~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~----~--~G--- 248 (588)
.++-+++++.+..+. ..+.++|. +++++|+..+++....-.|. +|+ ....||......+ .... + .|
T Consensus 81 ~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al-s~~~~~~~~~~~~~~~ 159 (412)
T TIGR02407 81 REFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSL-SVTGNRFKRQGAGVPL 159 (412)
T ss_pred HHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHH-HhcCCcccccCCCCCC
Confidence 566667766642221 11236675 79999887766643222343 465 4566776333322 1111 1 11
Q ss_pred CEEEEEeccCCCCc----cCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccC-C---HHHH-HHHHHcCcEEEEeC
Q 037063 249 ARVSSAEFAWPNLR----IHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARY-S---YMWM-SVAAEKGWHVLLDA 319 (588)
Q Consensus 249 ~~v~~v~~~~~~~~----i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~-p---l~~I-~~a~~~g~~vvvDa 319 (588)
..+..+|.. +.. -+.+.+++.+.+. ....+++..|++.-+.+..|... | +++| ++|+++|+++|+|.
T Consensus 160 ~~~~~~p~~--~~~~~~~~~~~~l~~~~~~~--~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 235 (412)
T TIGR02407 160 SNVSRMPYD--GYLGGDVDTIAYFEKLLEDS--SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDD 235 (412)
T ss_pred CCeEECCCC--CccccchhHHHHHHHHHHhc--cCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 123444432 110 1356677777520 01113567888888888899854 4 3446 88999999999999
Q ss_pred CCc-CCC--CCCCCCCCCCCCcEEEeccCccCCCCCCc--eEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 320 TAL-GSK--DMDTLGLSLFKPDFLICSFYKIFGENPSG--FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 320 a~~-~~~--d~~~l~l~~~~~D~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
++. ++. .+-........||++++| |.+| +.| +|+++++++. +.+.+...+ ++
T Consensus 236 V~tG~GRtG~~~a~~~~~v~PDi~~~~--K~lg--~~G~pigav~~~~~~-~~~~~~~~~--~T---------------- 292 (412)
T TIGR02407 236 IQAGCGRTGTFFSFEPAGIEPDIVCLS--KSIS--GYGLPLALTLIKPEL-DVWKPGEHN--GT---------------- 292 (412)
T ss_pred hhhCCCccchhHHhcccCCCCCEEEec--hhcc--CCccceeEEEEchhh-hccCCCccC--CC----------------
Confidence 975 221 000111112349988755 9877 334 8999998875 433321111 00
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDH-ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG 473 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~-l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg 473 (588)
| +.|..+ .++..++|+. +.+ +.+.++++.+.+++.++|+.+... .+.+ +. . ....|
T Consensus 293 ----~----~gnpl~---~aaa~a~l~~~i~~---~~l~~~~~~~g~~l~~~l~~l~~~-----~~~~-~~-~--vrg~G 349 (412)
T TIGR02407 293 ----F----RGNNLA---FVTATAALEYYWSD---DAFEKAVQRKSEIIQERLDRIVAE-----YPEL-IK-Q--VRGRG 349 (412)
T ss_pred ----C----CccHHH---HHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhh-----CCCc-eE-e--eecce
Confidence 0 011111 1333456663 333 567888888888888888765221 1211 11 1 01345
Q ss_pred cEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHH
Q 037063 474 PSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFE 553 (588)
Q Consensus 474 ~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~e 553 (588)
.++.+.+.+. .....+.+.+.++||.+.... .+..+||+++.+..|.+
T Consensus 350 l~~~l~l~~~----~~~~~~~~~~~~~Gv~v~~~~----------------------------~~~~~lr~~p~l~~t~~ 397 (412)
T TIGR02407 350 LMQGIECGDG----DLAGKIAKAAFENGLIIETSG----------------------------PNDEVIKLLPPLTIDEE 397 (412)
T ss_pred eEEEEEecCh----HHHHHHHHHHHHCCCEEeccC----------------------------CCCCEEEEECCCCCCHH
Confidence 6767777541 123456677778999886420 11128999999999999
Q ss_pred HHHHHHHHHHHhhh
Q 037063 554 DTYRLWAFVSRFLD 567 (588)
Q Consensus 554 Dv~~li~~l~~~l~ 567 (588)
|++++++.|.+.|+
T Consensus 398 ~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 398 TLQQGLDILEQAVE 411 (412)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998875
No 296
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.44 E-value=1.3e-10 Score=123.59 Aligned_cols=312 Identities=13% Similarity=0.077 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc---
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA--- 257 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~--- 257 (588)
+.++.+.+++++|.+ | +++|+++|.|++++.. +.+++||+| ....+..... .-....|+....+..+
T Consensus 80 ~~~LE~~vAe~lG~e---~-aV~v~sGTaAl~ll~~-l~v~pGd~V-p~n~~f~Tt~----ahI~~~Ga~fvDi~~d~a~ 149 (460)
T PRK13237 80 FYHLEETVQEYYGFK---H-VVPTHQGRGAENLLSR-IAIKPGQYV-PGNMYFTTTR----YHQELNGGIFVDIIIDEAH 149 (460)
T ss_pred HHHHHHHHHHHHCCC---e-EEEeCCHHHHHHHHHH-hCCCCcCEE-CCccchHhhH----HHHHhCCcEEEeeeccccc
Confidence 458899999999995 2 9999999999998744 448999975 4444543221 1124567755544311
Q ss_pred ------CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCC-CccCC---HHHH-HHHHHcCcEEEEeCCCcCCCC
Q 037063 258 ------WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVT-GARYS---YMWM-SVAAEKGWHVLLDATALGSKD 326 (588)
Q Consensus 258 ------~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~t-G~~~p---l~~I-~~a~~~g~~vvvDaa~~~~~d 326 (588)
..++.+|+++|+++|+. ...++++++.+....|.. |...| +++| ++|+++|+.||+|+|++.+--
T Consensus 150 ~~~~~~p~tgnlD~d~Le~~I~~----~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna 225 (460)
T PRK13237 150 DAQSDHPFKGNVDLDKLQALIDE----VGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENA 225 (460)
T ss_pred ccccCCCCCCCcCHHHHHHHhcc----ccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcCh
Confidence 34688999999999982 222466777777777888 67764 5777 899999999999999776500
Q ss_pred ----CC---CCCCCC--------CCCcEEEeccCccCCCCCCceEEEEEeCc-chhcccCCC--CCCCceEeeecCCCcc
Q 037063 327 ----MD---TLGLSL--------FKPDFLICSFYKIFGENPSGFGCLFVKKS-SASVLSGST--SSVSTIMGIEPSFSEI 388 (588)
Q Consensus 327 ----~~---~l~l~~--------~~~D~vv~S~~K~~G~~P~G~G~L~v~~~-~~~~l~~~~--~g~~g~v~~~~~~~~~ 388 (588)
.. --+-+. ...|.+++|++|-++. |.| |++..+++ +.++++... +- |+.
T Consensus 226 ~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~-~~G-G~i~t~D~eL~~~~r~~~~~~e--G~~--------- 292 (460)
T PRK13237 226 YFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLV-NIG-GFLAMNDEELFDEAKELVVVYE--GMP--------- 292 (460)
T ss_pred hhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCC-CCc-eEEEECCHHHHHHHHHhccccC--CCc---------
Confidence 00 001110 1379999999996664 554 77777764 445554331 11 111
Q ss_pred cccccccccccccCCCCCccch--hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCC
Q 037063 389 IELETLDESSQSKFPESSISGV--SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGP 466 (588)
Q Consensus 389 ~~~~~~~~~~f~e~GT~~~~~~--~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p 466 (588)
.+.+. ..+.++..+|+.... .+-+..|+ ..+++|.+.|.+- | +.|+.|
T Consensus 293 -----------------tygg~~grd~~alAvgl~E~~~--~~y~~~ri-~~~~~l~~~L~~~-------G---vpv~~p 342 (460)
T PRK13237 293 -----------------SYGGMAGRDMEAMAIGIEESVQ--YEYIEHRV-GQVRYLGEKLLAA-------G---VPIVEP 342 (460)
T ss_pred -----------------CCCChhhhHHHHHHhHHHhhch--HHHHHHHH-HHHHHHHHHHHHC-------C---CceecC
Confidence 11111 123555556654322 24444444 4568888888874 4 445555
Q ss_pred CCCCCcccEEEEEe----ecCCCCCcCHHH-HHHHHHhCCcE-eccccccCcccccchHHHHHHHHhhhcCCCCC-cCCc
Q 037063 467 KVMFDRGPSLAFNV----FDWNGTRIDPAL-VQKLADRHNIS-LSCGFLQNIFFSGEYEQERVRVLETRSGTNET-RSGV 539 (588)
Q Consensus 467 ~~~~~rg~iv~f~~----~~~~g~~i~~~~-v~~~l~~~gI~-v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~-~~g~ 539 (588)
..|.-|-+.. +...+....... ...+..+.||. +-.|.+......+ .+.. ....
T Consensus 343 ----~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~---------------~~~~~~~~~ 403 (460)
T PRK13237 343 ----VGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPK---------------TGENHYPKL 403 (460)
T ss_pred ----CCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCC---------------CCccCCCcc
Confidence 2334443332 222222233333 34555677884 2223322100000 0000 1123
Q ss_pred cEEEEecC--CCCCHHHHHHHHHHHHHhhhhh
Q 037063 540 SVVTAALG--CLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 540 ~~vRvSlg--~~~t~eDv~~li~~l~~~l~~~ 569 (588)
..||+.+. .| |.+.+|..++.|..+.+..
T Consensus 404 el~rlaiprr~y-t~~h~~~v~~~~~~~~~~~ 434 (460)
T PRK13237 404 ELVRLTIPRRVY-TYAHMDVVADSVIKLYKHR 434 (460)
T ss_pred ceeeeccccccc-cHHHHHHHHHHHHHHHHhH
Confidence 48999885 44 5699999999998866543
No 297
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.43 E-value=9.5e-11 Score=121.03 Aligned_cols=351 Identities=14% Similarity=0.131 Sum_probs=219.4
Q ss_pred CCCCCchhHHHHHhhhccCCCCCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCccccc
Q 037063 88 PQYLQTDQADRIRAQDYFHLSLNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDIC 161 (588)
Q Consensus 88 p~y~~~~~~~~iR~~~f~~l~~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~ 161 (588)
|.|.. ..+.-.|.+-....|.++.-|||..+. |-..+.+++++.+...+-..
T Consensus 19 ~~Y~~-~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h--------------------- 76 (404)
T COG4992 19 PTYGR-LPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWH--------------------- 76 (404)
T ss_pred cccCc-CceeEEeccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhh---------------------
Confidence 55654 223334433223346689999995543 55667888887655432111
Q ss_pred ccccccccccccCCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CC--CCC-eEE-EcCCCchhH
Q 037063 162 YRSVNLNSWLQYGSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FY--SNP-RLL-TVYDHENEA 236 (588)
Q Consensus 162 ~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~--~gd-~ll-~~~e~~s~~ 236 (588)
..|.. ..+...++-+.+.+..+ ..+ .|+|.+++|||+..++..-. +. ++. +|+ ....+|.-.
T Consensus 77 --~sn~~--------~~~~~~~la~~L~~~s~-~~d--~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT 143 (404)
T COG4992 77 --VSNLF--------YNEPQAELAEKLVELSP-FAD--RVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRT 143 (404)
T ss_pred --ccccc--------CChHHHHHHHHHHhhCc-ccc--EEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCcc
Confidence 11111 13445677777777776 323 49999999999887765432 22 222 355 455565411
Q ss_pred HHHH-----HHHHHhcC---CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH----
Q 037063 237 AALM-----IESSKKRG---ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---- 304 (588)
Q Consensus 237 ~~~~-----~~~a~~~G---~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---- 304 (588)
.-.+ .++.+..+ -.+..+|++ |+++++++|+ ++|..|++.-++-.-|++.|-++
T Consensus 144 ~galS~t~~~ky~~~F~Pl~~g~~~vpfn------Di~al~~ai~--------~~taAvivEPIQGEgGV~~~~~~fl~~ 209 (404)
T COG4992 144 LGALSATGQPKYRKGFGPLLPGFRHVPFN------DIEALEAAID--------EDTAAVIVEPIQGEGGVIPAPPEFLKA 209 (404)
T ss_pred ceeeeccCChhhccCCCCCCCCceecCCC------CHHHHHHHhc--------cCeEEEEEecccCCCCCCCCCHHHHHH
Confidence 1111 01111111 124455553 7899999999 79999999999999999988444
Q ss_pred H-HHHHHcCcEEEEeCCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCc
Q 037063 305 M-SVAAEKGWHVLLDATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVST 377 (588)
Q Consensus 305 I-~~a~~~g~~vvvDaa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g 377 (588)
+ ++|+++|+++|+|..|.. +. -....++ .||+++. -|-+|. ..-+|+++.++...+.+.+-..|.
T Consensus 210 lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV---~PDI~tl--aK~LgG-G~PigA~la~~~~~~~~~~G~HgS-- 281 (404)
T COG4992 210 LRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGV---EPDILTL--AKALGG-GFPIGAMLATEEIASAFTPGDHGS-- 281 (404)
T ss_pred HHHHHHHhCeEEEEeccccCCCccchHHHHHHhCC---CCCEEEe--eccccC-CccceeeEEchhhhhcCCCCcccC--
Confidence 6 789999999999999876 21 1122232 3898764 586653 345899999965555555544331
Q ss_pred eEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCC
Q 037063 378 IMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETG 457 (588)
Q Consensus 378 ~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g 457 (588)
+ | .|.| .+ .++..++|+.+.+ +.+.++.+++.+++.++|.++.++.
T Consensus 282 T--------------------f--GGNp--La---cAv~~a~l~~l~~---e~ll~~v~~~g~~~~~~L~~l~~~~---- 327 (404)
T COG4992 282 T--------------------F--GGNP--LA---CAVALAVLEVLLE---EGLLENVREKGEYLLQRLRELKRRY---- 327 (404)
T ss_pred C--------------------C--CcCH--HH---HHHHHHHHHHHcc---hhHHHHHHHHHHHHHHHHHHHhhcC----
Confidence 0 1 1222 11 2344456666655 7788889999999999999875432
Q ss_pred CCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcC
Q 037063 458 IPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRS 537 (588)
Q Consensus 458 ~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~ 537 (588)
+.++=+ .-+|-++.+.+... .....+.+.+.++|+.+-. .
T Consensus 328 -~~v~~v-----RG~GLmiGiel~~~----~~a~~~~~~~~~~gvL~~~------------------------------a 367 (404)
T COG4992 328 -PLVKEV-----RGRGLMIGIELKEP----YRARDIVRALREEGVLVLP------------------------------A 367 (404)
T ss_pred -Cceeee-----ecceeEEEEEecCc----ccHHHHHHHHHHCCeEEec------------------------------C
Confidence 222211 13456777777552 1356778888889987642 1
Q ss_pred CccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 538 GVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 538 g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
|..+||+.+...-+.|||+..++.+.+.++..
T Consensus 368 ~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~ 399 (404)
T COG4992 368 GPNVIRFLPPLVITEEEIDEALDALERALAAA 399 (404)
T ss_pred CCCeEEecCCccCCHHHHHHHHHHHHHHHHHh
Confidence 22299999999999999999999999988753
No 298
>PLN02397 aspartate transaminase
Probab=99.43 E-value=2.8e-11 Score=130.82 Aligned_cols=293 Identities=11% Similarity=0.057 Sum_probs=171.0
Q ss_pred HHHHHHHHHHhCCC---C-CCceE--EEecCHHHHHH--HHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEE
Q 037063 182 SKIRKRIMDFMNIS---E-DDYTL--VFTANQSSAFK--LLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSS 253 (588)
Q Consensus 182 ~~~r~~ia~~lga~---~-~e~~v--vft~g~T~al~--lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~ 253 (588)
.++|+.|++++.-. + .+..| +-+.+++++.. +.+..+ +.|||+|++....+.+. ...++..|++++.
T Consensus 94 ~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~-~~pGd~Vlv~~P~y~~y----~~~~~~~g~~~~~ 168 (423)
T PLN02397 94 AEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLAR-FYPGSTIYIPNPTWGNH----HNIFRDAGVPVRT 168 (423)
T ss_pred HHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHH-hCCCCEEEEeCCCchhH----HHHHHHcCCeEEE
Confidence 36788888866321 1 01123 22334444433 222333 46999987666554422 3455678999999
Q ss_pred Eecc-CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCC--CcCCCC
Q 037063 254 AEFA-WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDAT--ALGSKD 326 (588)
Q Consensus 254 v~~~-~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa--~~~~~d 326 (588)
++.. ..+..+|.+.+++.+.. . .+++++++++.++||||..++.+++ ++|+++|++||+|.+ .+..-+
T Consensus 169 v~l~~~~~~~~d~~~l~~~l~~----~-~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~ 243 (423)
T PLN02397 169 YRYYDPKTRGLDFDGLLEDLKA----A-PDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGD 243 (423)
T ss_pred eecccCcCCccCHHHHHHHHHh----C-CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCc
Confidence 9873 23467899998888761 1 2568999999999999999998874 678899999999998 222100
Q ss_pred ----CCCC-CCCCCC-CcEEEeccCccCCCCCCceEEEE--E-eCcchhccc----CCCCCCCceEeeecCCCccccccc
Q 037063 327 ----MDTL-GLSLFK-PDFLICSFYKIFGENPSGFGCLF--V-KKSSASVLS----GSTSSVSTIMGIEPSFSEIIELET 393 (588)
Q Consensus 327 ----~~~l-~l~~~~-~D~vv~S~~K~~G~~P~G~G~L~--v-~~~~~~~l~----~~~~g~~g~v~~~~~~~~~~~~~~ 393 (588)
...+ .+.... .-+++.||.|.||++.-++|+++ + .++.++.+. ......
T Consensus 244 ~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~------------------ 305 (423)
T PLN02397 244 LDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPM------------------ 305 (423)
T ss_pred hhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcc------------------
Confidence 0011 111111 13667799999985456689986 3 233322221 111000
Q ss_pred ccccccccCCCCCccchhhHHHHHHHHHH---HHHh--CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC-eEEEeCCC
Q 037063 394 LDESSQSKFPESSISGVSSKLVECKGLDH---ADAL--GLILISNRARYLINWLANALMNLHHPHSETGIP-LVRIYGPK 467 (588)
Q Consensus 394 ~~~~~f~e~GT~~~~~~~~~~al~~aL~~---l~~~--G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~-~v~i~~p~ 467 (588)
..+++.+.+ .++..+|+. .+.. -++.+.++.++.++.+.+.|.++ |.+ .+.++.
T Consensus 306 -------~~~~~~~~q----~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~-------~~~~~~~~~~-- 365 (423)
T PLN02397 306 -------YSNPPIHGA----SIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR-------GSPGDWSHIT-- 365 (423)
T ss_pred -------cCCCcHHHH----HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCCCCCccc--
Confidence 011111111 122223321 1010 03556677888888888988875 111 122222
Q ss_pred CCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecC
Q 037063 468 VMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALG 547 (588)
Q Consensus 468 ~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg 547 (588)
.+|++..|. + ++.+.+.+++++.||.+-. . . |+++.
T Consensus 366 ---p~gg~fl~~--~-----l~~~~~~~Ll~~~~V~v~~------------------------------~---~-Ri~~~ 401 (423)
T PLN02397 366 ---KQIGMFSFT--G-----LNKEQVDRMTKEYHIYMTR------------------------------D---G-RISMA 401 (423)
T ss_pred ---CCceEEEec--C-----CCHHHHHHHHHhCCEEECC------------------------------C---C-eEEEe
Confidence 346665553 2 3355677888999998742 2 2 88874
Q ss_pred CCCCHHHHHHHHHHHHHhhh
Q 037063 548 CLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 548 ~~~t~eDv~~li~~l~~~l~ 567 (588)
- .+.++|+++++.|++.++
T Consensus 402 ~-~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 402 G-LSSKNVPYLADAIHAVVT 420 (423)
T ss_pred e-CCHHHHHHHHHHHHHHHh
Confidence 2 478999999999999875
No 299
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.43 E-value=8.9e-11 Score=127.62 Aligned_cols=337 Identities=12% Similarity=0.093 Sum_probs=204.9
Q ss_pred CCCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|..+.-|||..+. |--.+.+.+++.+.+..... .+ . .. ..+..
T Consensus 78 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~-~~---------------------~----~~-----~~~~~ 126 (459)
T PRK11522 78 DTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPL-HS---------------------Q----EL-----LDPLR 126 (459)
T ss_pred ECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcc-cc---------------------c----cc-----CCHHH
Confidence 3467889997544 56677888888766632110 00 0 00 13445
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C--CCCC-eEE-EcCCCchhHHHHHHHHHHhcCC-------
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F--YSNP-RLL-TVYDHENEAAALMIESSKKRGA------- 249 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~--~~gd-~ll-~~~e~~s~~~~~~~~~a~~~G~------- 249 (588)
.++.+++++++.... ..+.|+.++|+|+..+++.-. + +.|. +|+ ....||...... .........
T Consensus 127 ~~lae~L~~~~p~~~--~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~-ls~~~~~~~~~~~~~~ 203 (459)
T PRK11522 127 AMLAKTLAALTPGKL--KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGA-LSATAKSTFRKPFMPL 203 (459)
T ss_pred HHHHHHHHHhCCCCC--CEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHH-hhhcCCcccccCCCCC
Confidence 567777777764322 359999999998887665321 1 1233 355 555677533221 111100000
Q ss_pred --EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCc
Q 037063 250 --RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATAL 322 (588)
Q Consensus 250 --~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~ 322 (588)
.+..+|. -|.+++++.|... ....++...|++.-+....|.+.| ++.+ ++|+++|+++|+|.+|.
T Consensus 204 ~~~~~~~~~------~d~~~l~~~l~~~--~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t 275 (459)
T PRK11522 204 LPGFRHVPF------GNIEAMRTALSEC--KKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT 275 (459)
T ss_pred CCCCcccCC------CCHHHHHHHHHHh--hccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee
Confidence 1112222 1567888888621 111245788899999999999998 8888 99999999999999974
Q ss_pred C-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccC--CCCCCCceEeeecCCCcccccccc
Q 037063 323 G-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSG--STSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 323 ~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~--~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
. +. -....++ .||++ .+-|-+|.+-.-+|+++++++.++.+.. ..+
T Consensus 276 G~GRtG~~~a~e~~gv---~PDiv--t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~--------------------- 329 (459)
T PRK11522 276 GMGRTGKMFACEHENV---QPDIL--CLAKALGGGVMPIGATIATEEVFSVLFDNPFLH--------------------- 329 (459)
T ss_pred cCCccchhhhhhccCC---CCCEE--EechhhhCCCccceeEEEcHHHHHHhccCCccc---------------------
Confidence 3 21 1122332 48976 5689776210127999999887664421 111
Q ss_pred cccccccCCCC--CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC-eE-EEeCCCCCC
Q 037063 395 DESSQSKFPES--SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIP-LV-RIYGPKVMF 470 (588)
Q Consensus 395 ~~~~f~e~GT~--~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~-~v-~i~~p~~~~ 470 (588)
.+|. |..+ .++..+.|+.+++ +.+.++++.+.++|.++|+++... .| .+ .+-
T Consensus 330 -------~~T~~gnp~~---~Aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~-----~~~~i~~Vr------ 385 (459)
T PRK11522 330 -------TTTFGGNPLA---CAAALATINVLLE---QNLPAQAEQKGDYLLDGFRQLARE-----YPDLVQEAR------ 385 (459)
T ss_pred -------CCCCCCCHHH---HHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHHh-----CCCceeeEE------
Confidence 1122 1111 2444566776655 457889999999999999887311 12 11 221
Q ss_pred CcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCC
Q 037063 471 DRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLT 550 (588)
Q Consensus 471 ~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~ 550 (588)
.+|.++.+.+.+.+ ....+.+.+.++||.+.... .+..++|+.+....
T Consensus 386 G~Gl~~giel~~~~----~~~~i~~~l~~~Gvl~~~~~----------------------------~~~~~lr~~Ppl~~ 433 (459)
T PRK11522 386 GKGMLMAIEFVDNE----IGYNFASEMFRQRVLVAGTL----------------------------NNAKTIRIEPPLTL 433 (459)
T ss_pred eceeEEEEEecCch----HHHHHHHHHHHCCeEEEecC----------------------------CCCCEEEEECCccC
Confidence 24678888775421 13456666777899885320 11238999999999
Q ss_pred CHHHHHHHHHHHHHhhhh
Q 037063 551 NFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 551 t~eDv~~li~~l~~~l~~ 568 (588)
|.+||+++++.+.+.+++
T Consensus 434 t~~~id~~l~~l~~~l~~ 451 (459)
T PRK11522 434 TIEQCEQVLKAARKALAA 451 (459)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999998865
No 300
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.42 E-value=1.1e-10 Score=126.52 Aligned_cols=346 Identities=9% Similarity=0.039 Sum_probs=202.7
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
++.-|+|..+. |--.+.+.+++.+.+.....+.+ .+ ...+...+
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~------------------------~~------~~~~~~~~ 90 (433)
T PRK08117 41 DGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPS------------------------GV------IYYESILK 90 (433)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccc------------------------cc------cCCHHHHH
Confidence 67889998664 33567788887666533111100 00 01345568
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHH-----hcC-----CEE
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSK-----KRG-----ARV 251 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~-----~~G-----~~v 251 (588)
+.+++++++.- ....|.|++++++|+..++.....-.|. +|+ ....||......+ .+.. ..+ ..+
T Consensus 91 la~~L~~~~~~--~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~-s~~~~~~~~~~~~~~~~~~~ 167 (433)
T PRK08117 91 LAEELAEITPG--GLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGAL-SVTTSKSKYRKYYQPLLGSV 167 (433)
T ss_pred HHHHHHHhCCC--CCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHH-hhcCCCccccccCCCCCCCc
Confidence 88888888732 2235999999999888776642111233 454 5556666333221 1100 000 112
Q ss_pred EEEeccCCCC---c--------cCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEE
Q 037063 252 SSAEFAWPNL---R--------IHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHV 315 (588)
Q Consensus 252 ~~v~~~~~~~---~--------i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~v 315 (588)
..+|...... . -+.+++++.+.+ .....+...|++.-+....|.+.| ++.| ++|+++|+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~ll 244 (433)
T PRK08117 168 YQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKH---QVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILL 244 (433)
T ss_pred EEeCCCccccccccCchhHHHHHHHHHHHHHHHh---ccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 3444321000 0 144556666651 011246888999999999999999 8889 9999999999
Q ss_pred EEeCCCcC-CCC-----CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccc
Q 037063 316 LLDATALG-SKD-----MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEII 389 (588)
Q Consensus 316 vvDaa~~~-~~d-----~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~ 389 (588)
|+|.++.. +.. ...++ ..+|+ .++.|.+|. ..-+|+++.++++++.+.....+ ++
T Consensus 245 I~DEv~tG~gr~G~~~~~~~~g---v~pDi--~t~sK~lg~-G~pigav~~~~~i~~~~~~~~~~--~T----------- 305 (433)
T PRK08117 245 IFDEVQTGFGRTGEWFAAQTFG---VVPDI--MTIAKGIAS-GLPLSAVVASKELMEQWPLGSHG--TT----------- 305 (433)
T ss_pred EEecchhccCccccchhHhhcC---CCCCE--eehhhhccC-CCcceeEEEcHHHHhhccCCCCC--CC-----------
Confidence 99999663 211 11222 23675 588997772 23388999998887655432211 00
Q ss_pred ccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCC
Q 037063 390 ELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKV 468 (588)
Q Consensus 390 ~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~ 468 (588)
| . .+..+ .++..++|+.+++ +.+.++++.+.+++.+.|.++... .+.+ .+
T Consensus 306 ---------~--~--~np~~---~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~-----~~~~~~v----- 356 (433)
T PRK08117 306 ---------F--G--GNPVA---CAAALATLEVIKE---EKLLDNANEMGAYALERLEVLKEK-----HPVIGDV----- 356 (433)
T ss_pred ---------C--C--cCHHH---HHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhc-----CCceeee-----
Confidence 0 0 11111 2444566666644 457788888888888888876311 1111 11
Q ss_pred CCCcccEEEEEeecCCCCC--cCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec
Q 037063 469 MFDRGPSLAFNVFDWNGTR--IDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL 546 (588)
Q Consensus 469 ~~~rg~iv~f~~~~~~g~~--i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl 546 (588)
...|-++.+.+.+.++.. .....+.+.+.++||.+.... .+...+|+++
T Consensus 357 -rg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----------------------------~~~~~lRl~p 407 (433)
T PRK08117 357 -RGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCG----------------------------NAGNVLRMIP 407 (433)
T ss_pred -ecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecC----------------------------CCCCEEEEeC
Confidence 123455666664322211 112345666777899875310 1112899999
Q ss_pred CCCCCHHHHHHHHHHHHHhhhh
Q 037063 547 GCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 547 g~~~t~eDv~~li~~l~~~l~~ 568 (588)
.+..|.+||+++++.|.+.+++
T Consensus 408 ~~~~t~~~i~~~~~~l~~~l~~ 429 (433)
T PRK08117 408 PLTVTKEEIDEGLDILDEALTE 429 (433)
T ss_pred CccCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988764
No 301
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.42 E-value=1.4e-10 Score=125.32 Aligned_cols=335 Identities=13% Similarity=0.109 Sum_probs=201.9
Q ss_pred CCCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|..+..|||..+. |--.+.+.+++.+.+.... .++ ... ..+..
T Consensus 71 D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~---~~~-------------------~~~---------~~~~~ 119 (442)
T TIGR03372 71 DTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQP---LHS-------------------QEL---------LDPLR 119 (442)
T ss_pred ECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCC---Ccc-------------------ccc---------CCHHH
Confidence 4478899996544 6667888888876663211 000 000 13444
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C--CCCC-eEE-EcCCCchhHHHHHHHHHHh----c-----
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F--YSNP-RLL-TVYDHENEAAALMIESSKK----R----- 247 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~--~~gd-~ll-~~~e~~s~~~~~~~~~a~~----~----- 247 (588)
.++-+++++.+.... ..+.|+.++|+|+.++++.-. . +.|. +|+ ....||...... ...... .
T Consensus 120 ~~lAe~L~~~~p~~~--~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~-ls~t~~~~~~~~~~p~ 196 (442)
T TIGR03372 120 ALLAKTLAALTPGKL--KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGA-LSATAKPAFRKPFMPL 196 (442)
T ss_pred HHHHHHHHHhCCCCc--CEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHH-hhccCCcccCCCCCCC
Confidence 567777777764322 359999999998887665321 1 1243 355 556677633222 111100 0
Q ss_pred CCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCc
Q 037063 248 GARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATAL 322 (588)
Q Consensus 248 G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~ 322 (588)
...+..+|++ |.+++++.+... .....+...|++.-+...-|.+.| ++.| ++|+++|+++|+|.+|.
T Consensus 197 ~~~~~~~p~~------d~~~~~~~l~~~--~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t 268 (442)
T TIGR03372 197 LPGFHHVAFG------DIEAMLKALNEC--KKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT 268 (442)
T ss_pred CCCCEEeCCC------CHHHHHHHHHHH--hcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc
Confidence 0113334432 456777777520 112246888889888888999999 8889 99999999999999974
Q ss_pred C-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccC--CCCCCCceEeeecCCCcccccccc
Q 037063 323 G-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSG--STSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 323 ~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~--~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
. +. -....+ ..||+++ +-|-+|.+-.-+|++++++++.+.+.. ..++
T Consensus 269 G~GRtG~~~a~e~~g---v~PDivt--~gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~~-------------------- 323 (442)
T TIGR03372 269 GMGRTGKMFACEHEG---VQPDILC--LAKALGGGVMPIGATIATEAVFSVLFDNPFLHT-------------------- 323 (442)
T ss_pred CCCccccchhhhhcC---CCCCeee--ehhhhcCCcccceEEEecHHHHHhhhccCcccc--------------------
Confidence 3 21 012233 3489876 789666210127888888887765521 1111
Q ss_pred cccccccCCCC--CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC-e-EEEeCCCCCC
Q 037063 395 DESSQSKFPES--SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIP-L-VRIYGPKVMF 470 (588)
Q Consensus 395 ~~~~f~e~GT~--~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~-~-v~i~~p~~~~ 470 (588)
+|. |..+ .++..++|+.+++ +.+.++.+.+.++|++.|.++.-. .| . ..+-
T Consensus 324 --------~T~~gnp~~---~Aaa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~~l~~~-----~~~~i~~vR------ 378 (442)
T TIGR03372 324 --------TTFGGNPLA---CAAALATINELLE---KNLPAQAAIKGDFLLDGFQQLAAE-----YPDLIIEAR------ 378 (442)
T ss_pred --------CCCCCCHHH---HHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHh-----CCCceEEEe------
Confidence 111 1111 2444567777765 446778888888888888776211 11 1 1221
Q ss_pred CcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCC
Q 037063 471 DRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLT 550 (588)
Q Consensus 471 ~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~ 550 (588)
.+|.++.+.+.+. -....+.+.+.++||.+.... .+..++|+++....
T Consensus 379 G~Gl~~giel~~~----~~~~~i~~~l~~~Gvl~~~~~----------------------------~~~~~lr~~Ppl~~ 426 (442)
T TIGR03372 379 GKGLLMAIEFRDN----EIGYAFAKELFQQNILVAGTL----------------------------NNAKSIRIEPPLTI 426 (442)
T ss_pred cceEEEEEEeCCh----HHHHHHHHHHHHCCcEEeecC----------------------------CCCCEEEEECCccc
Confidence 3467787877542 113456666777899885310 11128999999999
Q ss_pred CHHHHHHHHHHHHHhh
Q 037063 551 NFEDTYRLWAFVSRFL 566 (588)
Q Consensus 551 t~eDv~~li~~l~~~l 566 (588)
|.+||+++++.+.+.|
T Consensus 427 t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 427 TIEQCALVIKAAKDAL 442 (442)
T ss_pred CHHHHHHHHHHHHHhC
Confidence 9999999999988754
No 302
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.41 E-value=2e-10 Score=124.54 Aligned_cols=348 Identities=11% Similarity=0.079 Sum_probs=199.7
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
.++..|||..+. |--.+.+.+++.+.+......++ .. . ..+...
T Consensus 38 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-----------------------~~-----~--~~~~~~ 87 (443)
T PRK08360 38 IEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTP-----------------------IY-----G--FPVEPL 87 (443)
T ss_pred CCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccc-----------------------cc-----c--CcHHHH
Confidence 368889997554 56677888887666643111100 00 0 023344
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCe-EE-EcCCCchhHHHHHHHHHH-----hc--C--CEE
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPR-LL-TVYDHENEAAALMIESSK-----KR--G--ARV 251 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~-ll-~~~e~~s~~~~~~~~~a~-----~~--G--~~v 251 (588)
++-+++.+.+...- ..|.|+.++|+|+..++..-..-.|.+ |+ ....||......+ .... +. + ..+
T Consensus 88 ~la~~L~~~~p~~~--~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~-s~~~~~~~~~~~~~~~~~~ 164 (443)
T PRK08360 88 LLAEKLIEIAPGDN--PKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAM-SLTGLDFPVRALVGELSDV 164 (443)
T ss_pred HHHHHHHHhCCCCC--CEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHH-HhcCCCcccccCCCCCCCc
Confidence 66667777765432 259999999998887665332113443 55 4445665322221 1100 00 1 123
Q ss_pred EEEeccCCCCc------------cCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcE
Q 037063 252 SSAEFAWPNLR------------IHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWH 314 (588)
Q Consensus 252 ~~v~~~~~~~~------------i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~ 314 (588)
.+++.. .... -+.+.+++.+.+ ....++++.|++.-+.+++|...| +++| ++|+++|++
T Consensus 165 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~l 240 (443)
T PRK08360 165 HYIPYP-DCYRCPFGKEPGSCKMECVEYIKEKFEG---EVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGIL 240 (443)
T ss_pred EEEeCC-ccccccccCchhhhHHHHHHHHHHHHHh---ccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 444432 1000 123345555541 111256888888888899999988 6667 899999999
Q ss_pred EEEeCCCcC-CCCCC--CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccc
Q 037063 315 VLLDATALG-SKDMD--TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIEL 391 (588)
Q Consensus 315 vvvDaa~~~-~~d~~--~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~ 391 (588)
+|+|.++.. +..-. ....-...+|++ ++.|.+|. ...+|+++.++++++.+...... .+
T Consensus 241 lI~DEv~~g~gr~G~~~a~~~~~~~pDii--tlsK~l~~-G~pigav~~~~~i~~~~~~~~~~--~T------------- 302 (443)
T PRK08360 241 LVVDEVQSGLGRTGKWFAIEHFGVEPDII--TLGKPLGG-GLPISATIGRAEIMDSLPPLAHA--FT------------- 302 (443)
T ss_pred EEEeccccCCCcCccchhhhhcCCCCCEE--EecccccC-CceeEEEEEcHHHHhhhcCCCCC--CC-------------
Confidence 999999653 21111 111112348876 55998772 23489999998887766432211 00
Q ss_pred ccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCC
Q 037063 392 ETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFD 471 (588)
Q Consensus 392 ~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~ 471 (588)
-.| .+.. .++..++|+.+.+ +.+.++++.+.+++++.|+++... .+.+ +. -..
T Consensus 303 ---------~~~-~p~~----~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~-----~~~v---~~--vrg 355 (443)
T PRK08360 303 ---------LSG-NPVA----SAAALAVIEEIEE---KNLLKRAEKLGNYTKKRLEEMKKK-----HELI---GD--VRG 355 (443)
T ss_pred ---------CCc-CHHH----HHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHHh-----CCCe---ee--eec
Confidence 001 1111 1344566666655 356788888888888888775211 1212 11 013
Q ss_pred cccEEEEEeecCCCC-CcC---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecC
Q 037063 472 RGPSLAFNVFDWNGT-RID---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALG 547 (588)
Q Consensus 472 rg~iv~f~~~~~~g~-~i~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg 547 (588)
+|.++.+.+.+.... .-+ ...+...+.++||.+... +...+|+++.
T Consensus 356 ~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------------------------------~~~~lr~~P~ 405 (443)
T PRK08360 356 IGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFF------------------------------SGNVLRIQPP 405 (443)
T ss_pred cceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeec------------------------------CCCEEEEeCC
Confidence 566777766432111 011 234556677789987531 1128999999
Q ss_pred CCCCHHHHHHHHHHHHHhhhh
Q 037063 548 CLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 548 ~~~t~eDv~~li~~l~~~l~~ 568 (588)
+..|.+||+++++.+.+.++.
T Consensus 406 l~~t~~~id~~~~~l~~~l~~ 426 (443)
T PRK08360 406 LTIEKEVLDEGLDILEEAIED 426 (443)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999998865
No 303
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.41 E-value=3.3e-10 Score=120.31 Aligned_cols=350 Identities=11% Similarity=0.061 Sum_probs=212.5
Q ss_pred CCCCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|..+..|||..+ .|--.+.+++++.+++..-...+ .... ..+..
T Consensus 52 DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~--------------------------~~~~----~~e~~ 101 (447)
T COG0160 52 DVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTH--------------------------TRDL----YYEPY 101 (447)
T ss_pred eCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhccc--------------------------CCcc----cchhH
Confidence 347889999888 36677889998876664321111 1111 02445
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCe-EE-EcCCCchhHHHHHHHHH----Hhc-----CCE
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPR-LL-TVYDHENEAAALMIESS----KKR-----GAR 250 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~-ll-~~~e~~s~~~~~~~~~a----~~~-----G~~ 250 (588)
.+.-+++.+++-.+ ....++|+.++++|+..+++.-....|.. |+ +...||......|.-.. .+. ...
T Consensus 102 v~~ae~L~~~~p~~-~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~ 180 (447)
T COG0160 102 VELAEKLTALAPGS-GLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPG 180 (447)
T ss_pred HHHHHHHHHhCCcc-cCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCC
Confidence 56666777766653 23459999999999998877543334443 55 66777764443332111 111 123
Q ss_pred EEEEeccCCCC-----------ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcE
Q 037063 251 VSSAEFAWPNL-----------RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWH 314 (588)
Q Consensus 251 v~~v~~~~~~~-----------~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~ 314 (588)
|..+|...+.. .-..+.+++.|.. ......+...|++.-++..-|.+.| ++++ ++|++||++
T Consensus 181 v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~--~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gil 258 (447)
T COG0160 181 VYHVPYPNPYRCPFGIGGEECGDDALEYIERALFD--LEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGIL 258 (447)
T ss_pred eEEecCCccccCcccCchhhhhHHHHHHHHHHHHh--hcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 66676642211 1123345554541 1233457889999999999999987 3346 889999999
Q ss_pred EEEeCCCcC-C-----CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcc
Q 037063 315 VLLDATALG-S-----KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEI 388 (588)
Q Consensus 315 vvvDaa~~~-~-----~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~ 388 (588)
+|+|.+|.. + .-++..++ .||++++ .|-+|. ..-+|.++.|+++.+ ..+...+ ++
T Consensus 259 lI~DEVQtG~GRTG~~fa~E~~gv---~PDivt~--aK~ig~-G~Pl~avv~r~ei~~-~~~g~~~--~T---------- 319 (447)
T COG0160 259 LIADEVQTGFGRTGKMFAFEHFGV---EPDIVTL--AKSLGG-GLPLSAVVGRAEIMD-WPPGGHG--GT---------- 319 (447)
T ss_pred EEEeccccCCCccccchhhhhcCC---CCCEEEe--cccccC-CCceeEEeccHHhcc-cCCcccC--CC----------
Confidence 999999876 2 12344443 4898775 485552 334899999998866 3333222 11
Q ss_pred cccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCC
Q 037063 389 IELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKV 468 (588)
Q Consensus 389 ~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~ 468 (588)
-.|.| .+ .++..+.|+.+++ +++.+|...+-++|+++|.+|.-. ..++++-
T Consensus 320 ------------f~GNp--va---~Aaa~AvL~vie~---e~L~~~a~~~G~~l~~~L~~l~~~--------~~~IgdV- 370 (447)
T COG0160 320 ------------FGGNP--VA---CAAALAVLDVIEE---ENLLERAAELGEYLRDRLEELQEK--------HPLIGDV- 370 (447)
T ss_pred ------------CCcCH--HH---HHHHHHHHHHHHH---ccHHHHHHHHHHHHHHHHHHHHhh--------cCceecc-
Confidence 01111 11 1333345555544 578899999999999999887422 2233431
Q ss_pred CCCcccEEEEEeecCCCCC-cC---HHHHHHHHHhCCcEecc-ccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEE
Q 037063 469 MFDRGPSLAFNVFDWNGTR-ID---PALVQKLADRHNISLSC-GFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVT 543 (588)
Q Consensus 469 ~~~rg~iv~f~~~~~~g~~-i~---~~~v~~~l~~~gI~v~~-G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vR 543 (588)
.-+|-++...+....++. -+ .+.+...+.++|+.+.+ |. ...+||
T Consensus 371 -RG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~-----------------------------~~nviR 420 (447)
T COG0160 371 -RGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGP-----------------------------HGNVLR 420 (447)
T ss_pred -cccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCC-----------------------------CCcEEE
Confidence 134566666665432211 12 23466677778986643 21 112999
Q ss_pred EecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 544 AALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 544 vSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+.+-..-+.|++|.+++.|.+.|++
T Consensus 421 i~PPL~is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 421 ILPPLTISDEELDEGLDILEEALKE 445 (447)
T ss_pred EeCCcccCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999988764
No 304
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.40 E-value=2e-10 Score=126.13 Aligned_cols=418 Identities=13% Similarity=0.105 Sum_probs=231.1
Q ss_pred CccchHHHhhhhHhhhccccCCCCCCCCCCCCcchHHHHHHHHHh--CCCCCCchhH------HHHHhh-hccCCCCCCe
Q 037063 42 SPRTAAAARHEFKVTTTSSLFPNAHFTNHESLPSLQESFANFTKV--FPQYLQTDQA------DRIRAQ-DYFHLSLNNY 112 (588)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~f~~~--~p~y~~~~~~------~~iR~~-~f~~l~~~~~ 112 (588)
.++|....-++-..+.+++....+.|+...+++....-...|..- +=.|...... --.|.+ .|- .|..+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~i~~~~G~~l-~D~dG~ 89 (504)
T PLN02760 11 ARSTQVNLLKHYAATASLAPASARIFSTEASLQKEDSEENGFKGHDMLAPFTAGWQSTDLEPLVIEKSEGSYV-YDINGK 89 (504)
T ss_pred hhhhhHHHHHHHHHhhccchHHHHHhccCCCccccchhhhhhccCCcccCcccccccccCCCceEEeeeeeEE-EECCCC
Confidence 356666666666666666566666676666665444333333321 0011100000 000111 111 133678
Q ss_pred eeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHH
Q 037063 113 VCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRK 186 (588)
Q Consensus 113 vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~ 186 (588)
-|||..+ .|--.+.+++++.+.+.......+ .. + ...+...++-+
T Consensus 90 ~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~-----------------------~~-----~-~~~~~~~~lae 140 (504)
T PLN02760 90 KYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHS-----------------------FW-----N-RTTKPSLDLAK 140 (504)
T ss_pred EEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceec-----------------------cc-----c-cCcHHHHHHHH
Confidence 9999655 455667788887666643111000 00 0 01344556777
Q ss_pred HHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC------CCCCC-eEE-EcCCCchhHHHHHHHHHH------hcCC---
Q 037063 187 RIMDFMNISEDDYTLVFTANQSSAFKLLAESYP------FYSNP-RLL-TVYDHENEAAALMIESSK------KRGA--- 249 (588)
Q Consensus 187 ~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~------~~~gd-~ll-~~~e~~s~~~~~~~~~a~------~~G~--- 249 (588)
++.+++.-. +-..+.|++++++|+..++.... -+++. +|+ ....||......+ .+.. ..+.
T Consensus 141 ~L~~~~~~~-~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~-slsg~~~~~~~~~~~~~ 218 (504)
T PLN02760 141 ELLEMFTAR-KMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISA-SLSGLPALHQKFDLPAP 218 (504)
T ss_pred HHHhhcCCC-CCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhh-hccCChhhccCCCCCCC
Confidence 777765321 11259999999999887776441 11333 354 5666776433221 1110 1110
Q ss_pred EEEEEeccC------CCC------ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcC
Q 037063 250 RVSSAEFAW------PNL------RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKG 312 (588)
Q Consensus 250 ~v~~v~~~~------~~~------~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g 312 (588)
.+..++.+. +.. ....++|++++. +...++...|++.-+....|.+.| ++.| ++|+++|
T Consensus 219 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~----~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g 294 (504)
T PLN02760 219 FVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLIL----KEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYD 294 (504)
T ss_pred CcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHH----hcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 122232210 000 011245676664 112246788888888888899999 9999 9999999
Q ss_pred cEEEEeCCCc-CCC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCC
Q 037063 313 WHVLLDATAL-GSK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFS 386 (588)
Q Consensus 313 ~~vvvDaa~~-~~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~ 386 (588)
+++|+|.++. ++. -...+++ .||+ ..+-|.+|.+-.-+|++++++++++.+....... +.
T Consensus 295 ~lLI~DEV~TGfGRtG~~~a~e~~gv---~PDi--vtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~-~~-------- 360 (504)
T PLN02760 295 ILFIADEVICAFGRLGTMFGCDKYNI---KPDL--VSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKL-GS-------- 360 (504)
T ss_pred CEEEecchhhCCcccchhhHHHhcCC---CCcE--EEecccccCCccccceEeecHHHHhhhhcccccc-cC--------
Confidence 9999999973 431 0122333 3896 4557976621012788999998877664321000 00
Q ss_pred cccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeC
Q 037063 387 EIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYG 465 (588)
Q Consensus 387 ~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~ 465 (588)
|...+|.+-..+ ..++..++|+.+++ +.+.++++.+.++|++.|.++.. .+.+ .+-
T Consensus 361 ------------~~h~~T~~gnPl-~~Aaala~Le~i~~---~~l~~~~~~~g~~l~~~L~~l~~------~~~v~~vr- 417 (504)
T PLN02760 361 ------------FAHGFTYSGHPV-SCAVALEALKIYKE---RNIPEHVNKIAPRFQDGIKAFSG------SPIIGEIR- 417 (504)
T ss_pred ------------cccCCCCCCCHH-HHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhc------CCCeeeEE-
Confidence 001122222111 12444466666655 46788899999999999988621 1222 121
Q ss_pred CCCCCCcccEEEEEeecCCC--CCcC-----HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCC
Q 037063 466 PKVMFDRGPSLAFNVFDWNG--TRID-----PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSG 538 (588)
Q Consensus 466 p~~~~~rg~iv~f~~~~~~g--~~i~-----~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g 538 (588)
.+|.++.+.+.+..+ +... ...+.+.+.++||.++.. .
T Consensus 418 -----G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~-----------------------------g- 462 (504)
T PLN02760 418 -----GTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA-----------------------------G- 462 (504)
T ss_pred -----eCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEec-----------------------------C-
Confidence 346677777654322 1111 234556667789987642 1
Q ss_pred ccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 539 VSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 539 ~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
..+|+++.+..|.+||+++++.+.+.|++
T Consensus 463 -~~lrl~Ppl~it~eeid~~~~~l~~al~~ 491 (504)
T PLN02760 463 -DNIMMSPPLIITPEEVDELISIYGKALKA 491 (504)
T ss_pred -CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 17999999999999999999999998875
No 305
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.40 E-value=3e-10 Score=122.84 Aligned_cols=347 Identities=10% Similarity=0.048 Sum_probs=197.1
Q ss_pred CCCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|.++.-|||..+. |--.+.+.+++.+.+... +..+ .... ..+..
T Consensus 35 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~--~~~~-------------------~~~~---------~~~~~ 84 (425)
T PRK09264 35 DEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRD--GITH-------------------GLDM---------HTTAK 84 (425)
T ss_pred eCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhc--cccc-------------------cccc---------CcHHH
Confidence 3468889997544 666788888887666321 1000 0000 12334
Q ss_pred HHHHHHHHHHhCCCC-CCceEEEe-cCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHH----h--cC---
Q 037063 182 SKIRKRIMDFMNISE-DDYTLVFT-ANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSK----K--RG--- 248 (588)
Q Consensus 182 ~~~r~~ia~~lga~~-~e~~vvft-~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~----~--~G--- 248 (588)
.++-+++++.+..+. -++.++|+ +++|+|+..+++....-.|. +|+ ....||......+ .... + .|
T Consensus 85 ~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~l-s~~~~~~~~~~~~~~~ 163 (425)
T PRK09264 85 REFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSL-AVTGNSHKRQGAGVPL 163 (425)
T ss_pred HHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHH-HhcCCcccccCCCCCC
Confidence 456666666653321 11247675 79999887666543222344 455 4556776333221 1110 1 11
Q ss_pred CEEEEEeccCCC--CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCC
Q 037063 249 ARVSSAEFAWPN--LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATA 321 (588)
Q Consensus 249 ~~v~~v~~~~~~--~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~ 321 (588)
..+..+|..... ..-+.+++++.|.+. ....+++..|++.-+....|...+ ++.| ++|+++|+++|+|.++
T Consensus 164 ~~~~~~p~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~ 241 (425)
T PRK09264 164 NNVTRMPYDGYFGGDVDTLAYLEKLLEDS--SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQ 241 (425)
T ss_pred CCeEEeCCCCccccchhHHHHHHHHHHhc--cCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechh
Confidence 134455542100 012567788888620 011135778888888888888663 6667 9999999999999997
Q ss_pred cC-C---C--CCCCCCCCCCCCcEEEeccCccCCCCCCc--eEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccc
Q 037063 322 LG-S---K--DMDTLGLSLFKPDFLICSFYKIFGENPSG--FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELET 393 (588)
Q Consensus 322 ~~-~---~--d~~~l~l~~~~~D~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~ 393 (588)
.. + . .....+ ..||++++| |.+| +.| +|++++++++ ..+.+...+ ++
T Consensus 242 tG~GrtG~~~~~~~~~---v~PDi~t~~--K~l~--~~G~pigav~~~~~i-~~~~~~~~~--~T--------------- 296 (425)
T PRK09264 242 AGCGRTGTFFSFERAG---ITPDIVTLS--KSIS--GYGLPMALVLIKPEL-DVWKPGEHN--GT--------------- 296 (425)
T ss_pred hCCccccHHHHHhhcC---CCCCEEEec--cccC--CCccceEEEEEchhh-hccCCCccC--CC---------------
Confidence 42 1 0 012223 348987664 9777 334 5999998775 322211111 00
Q ss_pred ccccccccCCCCCccchhhHHHHHHHH-HHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCc
Q 037063 394 LDESSQSKFPESSISGVSSKLVECKGL-DHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDR 472 (588)
Q Consensus 394 ~~~~~f~e~GT~~~~~~~~~~al~~aL-~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~r 472 (588)
| . .+..+ .++..+++ +.+. -+.+.++++.+.+++.+.|.++.-. .+.+ + .+ . ...
T Consensus 297 -----~--~--gnp~~---~aaa~a~l~~~~~---~~~l~~~~~~~g~~l~~~l~~l~~~-----~~~~-~-~~-v-rg~ 352 (425)
T PRK09264 297 -----F--R--GNNLA---FVTATAALEEYWS---DDAFEKEVKAKGELVRERLEEIAAK-----YPGL-G-AE-V-RGR 352 (425)
T ss_pred -----C--C--CCHHH---HHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHHHh-----CCCc-e-ec-c-eec
Confidence 0 1 11111 13333555 3322 2568888899999998888776211 1212 1 11 0 124
Q ss_pred ccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCH
Q 037063 473 GPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNF 552 (588)
Q Consensus 473 g~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~ 552 (588)
|.++.+.+.+. .....+.+.+.++||.+.... .+...||+++.+..|.
T Consensus 353 Gl~~~i~l~~~----~~~~~l~~~~~~~Gv~~~~~~----------------------------~~~~~lr~~p~l~~t~ 400 (425)
T PRK09264 353 GMMQGIDFGDG----ELAGKIAAEAFENGLIIETSG----------------------------PEDEVVKLLPPLTIDE 400 (425)
T ss_pred ccEEEEEecCh----HHHHHHHHHHHHCCCEEeccC----------------------------CCCCEEEEeCCCCCCH
Confidence 56667776541 123456777778899886421 1112899999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 037063 553 EDTYRLWAFVSRFLDA 568 (588)
Q Consensus 553 eDv~~li~~l~~~l~~ 568 (588)
+||+++++.|.+.+++
T Consensus 401 ~ei~~~~~~l~~~l~~ 416 (425)
T PRK09264 401 EELEEGLDILEEAVAE 416 (425)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998876
No 306
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.40 E-value=3.1e-10 Score=116.44 Aligned_cols=322 Identities=15% Similarity=0.150 Sum_probs=190.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCC-ceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 178 SELESKIRKRIMDFMNISEDD-YTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e-~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.+++..+++.....++.++.+ -+|++|+|.|.|+..+.+.+ .++||.|+++ +.+.+ + .+..+..|++++.|+
T Consensus 103 peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~-~N~gd~vlie~~ty~~-A----L~s~~a~gv~~ipv~ 176 (472)
T KOG0634|consen 103 PELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTL-INRGDHVLIEEYTYPS-A----LQSMEALGVKIIPVK 176 (472)
T ss_pred HHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHh-hcCCCceEEecccchH-H----HHhccccCceEEecc
Confidence 455556666444445555433 37999999999999999999 9999997765 33433 2 345577898888888
Q ss_pred ccCCCCccCHHHHHHHHhhhccc-cC-CCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCC----CcC--
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKK-KK-KKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDAT----ALG-- 323 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~-~~-~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa----~~~-- 323 (588)
.+ ...+++|.|++.+..-+.. .+ ....-|.++|.-+||||..++++. | ++||+|+.++|.|.. |+-
T Consensus 177 md--~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y 254 (472)
T KOG0634|consen 177 MD--QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTY 254 (472)
T ss_pred cc--CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeecccc
Confidence 76 3458999999999742111 11 224568899999999999999986 7 999999999999986 221
Q ss_pred -C---------------CC-C-CCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCC
Q 037063 324 -S---------------KD-M-DTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSF 385 (588)
Q Consensus 324 -~---------------~d-~-~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~ 385 (588)
| ++ + .-++++-.+--+=.-||.|+++. ..++|++.+.+-+++++-... ++.
T Consensus 255 ~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaP-GlRlG~it~~~~~l~ril~~a----e~~------ 323 (472)
T KOG0634|consen 255 NPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAP-GLRLGWITGNSLFLKRILDLA----EVA------ 323 (472)
T ss_pred CCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcC-cceeEEeecCHHHHHHHhhhc----cee------
Confidence 1 00 0 11222111112334599999994 578999999887765432111 110
Q ss_pred CcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHH----HHHHHHHHHHHHHHHHHcccCCCCCCCCC--
Q 037063 386 SEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLIL----ISNRARYLINWLANALMNLHHPHSETGIP-- 459 (588)
Q Consensus 386 ~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~----i~~r~~~L~~~l~~~L~~L~h~~~~~g~~-- 459 (588)
..|-..+.+ ..+.+-|+...+.|.-+ ++.-....++.+..+|.+. .|
T Consensus 324 ---------------t~~pSg~sq----~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~ky--------lp~~ 376 (472)
T KOG0634|consen 324 ---------------TSGPSGFSQ----GIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKY--------LPKS 376 (472)
T ss_pred ---------------ecCcccccH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CCCC
Confidence 000011111 12223344333333222 2222223344555555552 22
Q ss_pred eEEEeCCCCCCCcccEEEEEee----cCCCCCcC--HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCC
Q 037063 460 LVRIYGPKVMFDRGPSLAFNVF----DWNGTRID--PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTN 533 (588)
Q Consensus 460 ~v~i~~p~~~~~rg~iv~f~~~----~~~g~~i~--~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~ 533 (588)
.+++..|. .|-.+-+++. +.+ .-++ .+.+...+.++||.+-.|..-.. +
T Consensus 377 ~~~~~~P~----aGmFiwv~i~~~~~~~~-~~i~q~~e~i~~~~vk~gV~~v~G~~F~v-------------------~- 431 (472)
T KOG0634|consen 377 VCEYHPPK----AGMFIWVEIPYINFDTK-KSINQIEEIIFIKAVKNGVKLVCGSWFMV-------------------D- 431 (472)
T ss_pred eeEEecCC----cceEEEEEecccccccc-cchHHHHHHHHHHHHHCCeEEecCceeEE-------------------c-
Confidence 24555542 3445555553 100 0122 23356677889999988843210 0
Q ss_pred CCcC-CccEEEEecCCCCCHHHHHHHHHHHHHhhhhhhc
Q 037063 534 ETRS-GVSVVTAALGCLTNFEDTYRLWAFVSRFLDADFV 571 (588)
Q Consensus 534 ~~~~-g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~~~ 571 (588)
+... +.-.+|+|+.++ ..|+++..++.+...+++.|-
T Consensus 432 p~~s~~kiffRls~a~a-~~e~l~~g~~rf~~~ike~f~ 469 (472)
T KOG0634|consen 432 PESSWSKIFFRLSIAFA-EPEKLDEGIERFGSVIKEHFI 469 (472)
T ss_pred CccCCCcceEEEEeecC-CHHHHHHHHHHHHHHHHHHhh
Confidence 0011 112899999876 456888888888877777664
No 307
>PRK06541 hypothetical protein; Provisional
Probab=99.38 E-value=4.3e-10 Score=122.49 Aligned_cols=348 Identities=10% Similarity=0.022 Sum_probs=201.2
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|||..+. |--.+.+++++.+.+....+..+ . . ...+...+
T Consensus 50 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~------------------------~-~-----~~~~~~~~ 99 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPL------------------------W-S-----YAHPPAIE 99 (460)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccc------------------------c-c-----cCCHHHHH
Confidence 68889997553 56677888888766643111000 0 0 01344456
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----CCC-CeEE-EcCCCchhHHHHHHHHHH----hc--C-
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----YSN-PRLL-TVYDHENEAAALMIESSK----KR--G- 248 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~~g-d~ll-~~~e~~s~~~~~~~~~a~----~~--G- 248 (588)
+-+++++++..+- ..|.|+.++++|+..++.... . ++| .+|+ ....||......+ .... +. +
T Consensus 100 la~~l~~~~p~~~--~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~-s~~~~~~~~~~~~~ 176 (460)
T PRK06541 100 LAERLAALAPGDL--NRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGAL-AITGLPAFKAPFEP 176 (460)
T ss_pred HHHHHHHhCCCCc--CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhh-cCcCChhhccccCC
Confidence 7777777764322 359999999998876655321 1 112 3455 4556665332221 1100 00 0
Q ss_pred --CEEEEEeccCCCCc-----cC--------HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHH
Q 037063 249 --ARVSSAEFAWPNLR-----IH--------SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVA 308 (588)
Q Consensus 249 --~~v~~v~~~~~~~~-----i~--------~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a 308 (588)
..+..+|.. ...+ -+ .+.+++.+. +...+....|++.-+.+..|.+.| ++.| ++|
T Consensus 177 ~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc 251 (460)
T PRK06541 177 LVPGGFRVPNT-NFYRAPELGDDPEAFGRWAADRIEEAIE----FEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREIC 251 (460)
T ss_pred CCCCcEEeCCC-ccccccccCCCHHHHHHHHHHHHHHHHH----hcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHH
Confidence 112333322 1000 01 255666665 112246788888888999999999 8888 999
Q ss_pred HHcCcEEEEeCCC-cCCCC-----CCCCCCCCCCCcEEEeccCccCCCCCC-ceEEEEEeCcchhcccCCCCCCCceEee
Q 037063 309 AEKGWHVLLDATA-LGSKD-----MDTLGLSLFKPDFLICSFYKIFGENPS-GFGCLFVKKSSASVLSGSTSSVSTIMGI 381 (588)
Q Consensus 309 ~~~g~~vvvDaa~-~~~~d-----~~~l~l~~~~~D~vv~S~~K~~G~~P~-G~G~L~v~~~~~~~l~~~~~g~~g~v~~ 381 (588)
+++|+++|+|.++ .++.. ...++ ..||+++ +.|.+|. .. -+|++++++++++.+.+.. . ..
T Consensus 252 ~~~g~llI~DEV~tGfGR~G~~~a~~~~g---v~PDivt--~gK~l~~-G~~pigav~~~~~i~~~~~~~~-~--~~--- 319 (460)
T PRK06541 252 DRYDVLLVSDEVICAFGRLGEMFGCERFG---YVPDIIT--CAKGITS-GYSPLGAMIASDRLFEPFLDGP-T--MF--- 319 (460)
T ss_pred HHcCCEEEEechhhCCCcCchhhhhhhcC---CCCCEEE--ecccccC-CccceeEEEEcHHHHHHhhcCC-C--cc---
Confidence 9999999999997 34310 11223 2489775 7897762 21 3899999998876554321 1 00
Q ss_pred ecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE
Q 037063 382 EPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV 461 (588)
Q Consensus 382 ~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v 461 (588)
+ -.+|..-..+ ..++..+.|+.+.+ +.+.++++.+.++|.+.|.++.- .+.+
T Consensus 320 -----------------~-~~~T~~gnp~-~~aaala~l~~l~~---~~~~~~~~~~g~~l~~~L~~l~~------~~~v 371 (460)
T PRK06541 320 -----------------L-HGYTFGGHPV-SAAVALANLDIFER---EGLLDHVRDNEPAFRATLEKLLD------LPIV 371 (460)
T ss_pred -----------------c-cCCCCCCCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhc------CCCe
Confidence 0 0112222111 11333355555544 45678889999999999988620 1222
Q ss_pred EEeCCCCCCCcccEEEEEeecCCC--CCcC--------HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcC
Q 037063 462 RIYGPKVMFDRGPSLAFNVFDWNG--TRID--------PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSG 531 (588)
Q Consensus 462 ~i~~p~~~~~rg~iv~f~~~~~~g--~~i~--------~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~ 531 (588)
..+ ...|.++.+.+.+... +.+. ...+...+.++||.+....
T Consensus 372 ~~v-----rg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----------------------- 423 (460)
T PRK06541 372 GDV-----RGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD----------------------- 423 (460)
T ss_pred EEE-----EecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecC-----------------------
Confidence 111 1346777777643211 1111 1234556667899886420
Q ss_pred CCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 532 TNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 532 ~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.|...||+++.+..|.+||+++++.+.+.+.+
T Consensus 424 -----~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 424 -----RGDPVVQLAPPLISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred -----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 12238999999999999999999999998865
No 308
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.36 E-value=3.7e-11 Score=115.28 Aligned_cols=282 Identities=13% Similarity=0.122 Sum_probs=184.8
Q ss_pred CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCe-EEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHH
Q 037063 193 NISEDDYTLVFTANQSSAFKLLAESYPFYSNPR-LLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKK 271 (588)
Q Consensus 193 ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~-ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~ 271 (588)
+..++. |....|+.+.+.++++.. .-||.+ |+.....++-++ --|.-.+++|+.+|.+ ++..++.+.+.+.
T Consensus 83 pLt~dn--ic~GvGsDE~ID~iiR~~-c~PGkeKIl~cPPtysMY~----v~A~iNd~eVvkvpl~-pdF~lnvdai~ev 154 (375)
T KOG0633|consen 83 PLTSDN--ICVGVGSDELIDLIIRCV-CDPGKEKILDCPPTYSMYV----VDAAINDAEVVKVPLN-PDFSLNVDAIAEV 154 (375)
T ss_pred CCCccc--eEEecCcHHHHHHHHhhe-ecCCccceeecCCcceeEE----EEeecCCceEEEecCC-CCccccHHHHHHH
Confidence 444443 999999999999999988 789955 765444333111 1234468999999998 8999999999999
Q ss_pred HhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH-cCcEEEEeCC--CcCCCCCCCCCCC-CCCCcEEEeccCc
Q 037063 272 IVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE-KGWHVLLDAT--ALGSKDMDTLGLS-LFKPDFLICSFYK 346 (588)
Q Consensus 272 i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~-~g~~vvvDaa--~~~~~d~~~l~l~-~~~~D~vv~S~~K 346 (588)
+.. +...+++.++.+.||||.+...+.| ++.+- -+.+|+||.| .+.+ +...+.+- +++-=++.-.++|
T Consensus 155 l~~------ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg-~~S~~~lV~kYpNLivlqTlSK 227 (375)
T KOG0633|consen 155 LEL------DSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSG-VESRMKLVKKYPNLIVLQTLSK 227 (375)
T ss_pred Hhc------cccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeecc-ccccchHhHhCCceeehhhhhh
Confidence 873 2589999999999999999999999 55443 2689999998 3333 23344333 3333344559999
Q ss_pred cCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHh
Q 037063 347 IFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL 426 (588)
Q Consensus 347 ~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~ 426 (588)
-||.+..++|+.+...++++.|...... .|++. ++-..||+.+..-
T Consensus 228 sfGLAGiRvG~~~~~~~ia~iln~~KaP------------------------------YNiS~----~~s~~AL~Als~~ 273 (375)
T KOG0633|consen 228 SFGLAGIRVGYGAFPLSIAEILNRAKAP------------------------------YNISV----AGSVAALAALSDS 273 (375)
T ss_pred hcCcceeEeecccccHHHHHHHHhccCC------------------------------ccccc----hhHHHHHHhcCcc
Confidence 9997666788888888877655432211 11111 2223444444321
Q ss_pred C---HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEE-EeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCc
Q 037063 427 G---LILISNRARYLINWLANALMNLHHPHSETGIPLVR-IYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNI 502 (588)
Q Consensus 427 G---~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~-i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI 502 (588)
. |+..+.-+.+-+.+|...|..+ |.+. +.++ ....++...+.+-+ ...........+...|+
T Consensus 274 n~kkme~~rdaiv~er~RL~keLt~v---------~~~~~~~gg----~daNFiLi~v~~~~-n~~akkly~q~at~~gV 339 (375)
T KOG0633|consen 274 NGKKMEDVRDAIVRERERLFKELTEV---------PFLNDYPGG----SDANFILIEVTGGD-NGMAKKLYKQDATKMGV 339 (375)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhcC---------ccccCCCCc----ccccEEEEEEcCCC-cHHHHHHHHHHHHhcce
Confidence 1 5666666666666777777775 3332 2222 23455556655421 12344456677888999
Q ss_pred EeccccccCcccccchHHHHHHHHhhhcCCCCCcCC-ccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 503 SLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSG-VSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 503 ~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g-~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
.||.-.. + .| .+++||+.| |.|+-.-|++.+++|+
T Consensus 340 vVRfrgs-----------------e---------~~c~G~lRitvG---t~EentvL~k~~K~~l 375 (375)
T KOG0633|consen 340 VVRFRGS-----------------E---------EGCKGYLRITVG---TPEENTVLMKCLKQFL 375 (375)
T ss_pred EEEEcCC-----------------c---------cccceeEEEEcC---CcccchHHHHHHHhhC
Confidence 9985310 0 11 129999999 7899999999998875
No 309
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.36 E-value=7e-10 Score=120.29 Aligned_cols=351 Identities=13% Similarity=0.085 Sum_probs=200.5
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+. |.-.+.+++++.+.+..-.+... . . ...+...
T Consensus 43 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-----------------------~--~-----~~~~~~~ 92 (442)
T PRK13360 43 HDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPA-----------------------F--Q-----MGHPKAF 92 (442)
T ss_pred CCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCccc-----------------------C--C-----cCCHHHH
Confidence 367889998655 77788888888666543111100 0 0 0124445
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----CCC-CeEE-EcCCCchhHHHHHH-----HHHHhcC-
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----YSN-PRLL-TVYDHENEAAALMI-----ESSKKRG- 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~~g-d~ll-~~~e~~s~~~~~~~-----~~a~~~G- 248 (588)
++-+++++++.... ..|.|+.++|+|+..++.... + +++ .+|+ ....||......+. ...+..+
T Consensus 93 ~la~~l~~~~p~~~--~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~ 170 (442)
T PRK13360 93 ELANRIAEIAPGGL--NHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGA 170 (442)
T ss_pred HHHHHHHHhCCCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCC
Confidence 77777888764221 259999999998877655321 1 122 3455 45566653221110 0000001
Q ss_pred --CEEEEEeccCCCCc--c----------CHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHH
Q 037063 249 --ARVSSAEFAWPNLR--I----------HSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAA 309 (588)
Q Consensus 249 --~~v~~v~~~~~~~~--i----------~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~ 309 (588)
..+..+|......+ + ..++|++++. ....++...|++.-+....|.+.| ++.| ++|+
T Consensus 171 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~----~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~ 246 (442)
T PRK13360 171 LLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVT----LHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICD 246 (442)
T ss_pred CCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHH----hcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 12333443210000 0 1356777775 112256788999999999999999 9999 9999
Q ss_pred HcCcEEEEeCCCc-CCC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeec
Q 037063 310 EKGWHVLLDATAL-GSK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEP 383 (588)
Q Consensus 310 ~~g~~vvvDaa~~-~~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~ 383 (588)
++|+++|+|.++. ++. -....+ ..||++ .+-|.+|.+-.-+|++++++++.+.+......+ ..
T Consensus 247 ~~g~llI~DEv~tG~GrtG~~~a~~~~g---v~PDiv--t~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~-~~----- 315 (442)
T PRK13360 247 KHGILLIFDEVITGFGRLGAPFAAQYFG---VTPDLL--TCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAG-IE----- 315 (442)
T ss_pred HcCCEEEEechhhCCCCCccchhhhhcC---CCCcee--eeeeccccCccceEEEEEcHHHHHHhhcCCccc-cc-----
Confidence 9999999999973 331 012223 348976 568966521011788888888776553211000 00
Q ss_pred CCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-E
Q 037063 384 SFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-R 462 (588)
Q Consensus 384 ~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~ 462 (588)
.+ ..+|.....+ ..++..++|+.+++ +.+.++.+++.+++.+.|.++.. .+.+ .
T Consensus 316 --------------~~-~~~T~~g~pl-~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~l~~l~~------~~~v~~ 370 (442)
T PRK13360 316 --------------FF-HGYTYSGHPL-ACAAALATLDLYER---EGLLTRAARLAPYWEDALHSLRD------APHVID 370 (442)
T ss_pred --------------cc-cCCCCCCCHH-HHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhc------CCCeee
Confidence 00 0112111111 12555577777766 34677888888889888887620 1211 1
Q ss_pred EeCCCCCCCcccEEEEEeecCCCCC-cCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccE
Q 037063 463 IYGPKVMFDRGPSLAFNVFDWNGTR-IDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSV 541 (588)
Q Consensus 463 i~~p~~~~~rg~iv~f~~~~~~g~~-i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~ 541 (588)
+- ..|.++.+.+....+.. -....+...+.++||.++.+ . ..
T Consensus 371 vr------G~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~-----------------------------~--~~ 413 (442)
T PRK13360 371 IR------NLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYT-----------------------------G--DI 413 (442)
T ss_pred ee------ccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEec-----------------------------C--CE
Confidence 11 23444455553321111 11234555666789987532 1 17
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 542 VTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 542 vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+|+++.+..|.+||+++++.|.+.|++
T Consensus 414 lr~~Ppl~~t~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 414 LALSPPLIIEEAQIDELFDILAQALKE 440 (442)
T ss_pred EEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988754
No 310
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.36 E-value=6.5e-10 Score=119.99 Aligned_cols=351 Identities=12% Similarity=0.061 Sum_probs=200.2
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+. |--.+.+.+++.+.+..... .+ .. ....+...
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~--~~----------------------~~------~~~~~~~~ 86 (421)
T PRK09792 37 VEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTH--TA----------------------YQ------IVPYESYV 86 (421)
T ss_pred CCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccC--cc----------------------cC------ccCCHHHH
Confidence 368889998654 66777888887666643111 00 00 00123334
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHH-----hcC-----CE
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSK-----KRG-----AR 250 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~-----~~G-----~~ 250 (588)
++-+++.+++... ....++|+.++|+|+..+++....-.|. +|+ ....||......+ .+.. +.+ ..
T Consensus 87 ~la~~l~~~~p~~-~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~-s~~~~~~~~~~~~~~~~~~ 164 (421)
T PRK09792 87 TLAEKINALAPVS-GQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTM-ALTGKVAPYKIGFGPFPGS 164 (421)
T ss_pred HHHHHHHHhCCCC-CCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHH-hhcCCCcccccCCCCCCCC
Confidence 5666677765421 1235999999999887666543222344 455 4556776333222 1110 111 11
Q ss_pred EEEEeccCCCCcc----CHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccC-C---HHHH-HHHHHcCcEEEEeCCC
Q 037063 251 VSSAEFAWPNLRI----HSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARY-S---YMWM-SVAAEKGWHVLLDATA 321 (588)
Q Consensus 251 v~~v~~~~~~~~i----~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~-p---l~~I-~~a~~~g~~vvvDaa~ 321 (588)
+..+|+......+ +.+.+++.+.+ ....++...|++.-+++++|... | +++| ++|+++|+++|+|.++
T Consensus 165 ~~~v~~p~~~~~~~~~~~~~~l~~~~~~---~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~ 241 (421)
T PRK09792 165 VYHVPYPSDLHGISTQDSLDAIERLFKS---DIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQ 241 (421)
T ss_pred cEEcCCCcccccccHHHHHHHHHHHHHh---ccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 3344442111112 23667777651 01124678888888899999876 7 6667 8999999999999985
Q ss_pred cC-CCCCCCCCCC--CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccc
Q 037063 322 LG-SKDMDTLGLS--LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESS 398 (588)
Q Consensus 322 ~~-~~d~~~l~l~--~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~ 398 (588)
.. +..-..+... ...+|+ .++.|.+|. ...+|+++.++++++.+.+...+ ++
T Consensus 242 tg~gr~G~~~a~~~~~~~pDi--~t~gK~l~~-G~pigav~~~~~i~~~~~~~~~~--~T-------------------- 296 (421)
T PRK09792 242 SGFARTGKLFAMDHYADKPDL--MTMAKSLAG-GMPLSGVVGNANIMDAPAPGGLG--GT-------------------- 296 (421)
T ss_pred cCCCCCCchhHHHhcCCCCcE--EEeehhhcC-CCceEEEEEcHHHHhccCCCCcC--CC--------------------
Confidence 43 2111111111 134884 677997662 34589999998887766432211 00
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEE
Q 037063 399 QSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAF 478 (588)
Q Consensus 399 f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f 478 (588)
| .| +... .++..+.++++++ +++.++++.+.+++.+.|..|... .|.+. .+ ..+|.++.+
T Consensus 297 ~--~g--npl~---~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~~~-----~p~v~--~v---rG~Gl~~~i 356 (421)
T PRK09792 297 Y--AG--NPLA---VAAAHAVLNIIDK---ESLCERANQLGQRLKNTLIDAKES-----VPAIA--AV---RGLGSMIAA 356 (421)
T ss_pred C--CC--CHHH---HHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHHh-----CCCcc--ee---cccceEEEE
Confidence 0 11 1111 1334466666655 467778888888888888776311 12211 11 124567777
Q ss_pred EeecCC-CCC--cCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHH
Q 037063 479 NVFDWN-GTR--IDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDT 555 (588)
Q Consensus 479 ~~~~~~-g~~--i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv 555 (588)
.+.+.+ +.. .....+...+.++||.+... . ....+||+.+.+..+.+||
T Consensus 357 e~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~---g-------------------------~~~~~irl~P~l~i~~~ei 408 (421)
T PRK09792 357 EFNDPQTGEPSAAIAQKIQQRALAQGLLLLTC---G-------------------------AYGNVIRFLYPLTIPDAQF 408 (421)
T ss_pred EecCCccCCcchHHHHHHHHHHHHCCcEEeec---C-------------------------CCCCEEEEeCCCcCCHHHH
Confidence 765421 110 11344566666789988521 0 0012899999998999999
Q ss_pred HHHHHHHHHhhh
Q 037063 556 YRLWAFVSRFLD 567 (588)
Q Consensus 556 ~~li~~l~~~l~ 567 (588)
+++++.|.+.|.
T Consensus 409 ~~~~~~l~~~l~ 420 (421)
T PRK09792 409 DAAMKILQDALS 420 (421)
T ss_pred HHHHHHHHHHHh
Confidence 999999988764
No 311
>PRK06062 hypothetical protein; Provisional
Probab=99.36 E-value=5e-10 Score=121.74 Aligned_cols=346 Identities=11% Similarity=0.083 Sum_probs=201.3
Q ss_pred CCCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|..+..|||..+. |--.+.+++++.+.+......++ .. ..+..
T Consensus 49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~--------------------------~~-----~~~~~ 97 (451)
T PRK06062 49 DYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP--------------------------AH-----ANDAR 97 (451)
T ss_pred ECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC--------------------------cc-----CCHHH
Confidence 3368899998654 66677888888766643111110 00 13444
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHH---hcC-----CEE
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSK---KRG-----ARV 251 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~---~~G-----~~v 251 (588)
.++-++|++++...- ..|.|+.++++|...+++....-.|. +|+ ....||...... ..... ... ..+
T Consensus 98 ~~lae~L~~~~p~~~--~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a-ls~~~~~~~~~~~~~~~~~ 174 (451)
T PRK06062 98 SEAARLIAERAPGDL--SKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSA-INLTGDPRRWPNDTGRAGV 174 (451)
T ss_pred HHHHHHHHHhCCCCC--CEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHH-HhhcCCcccccCCCCCCCC
Confidence 567777777764322 35999999999988776643222344 455 455666533222 11110 000 012
Q ss_pred EEEeccCCC-Cc----cC-------HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcE
Q 037063 252 SSAEFAWPN-LR----IH-------SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWH 314 (588)
Q Consensus 252 ~~v~~~~~~-~~----i~-------~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~ 314 (588)
..++..... .. -+ .++++++|+ ....++...|++.-+...-|.+.| ++.| ++|+++|++
T Consensus 175 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~----~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~l 250 (451)
T PRK06062 175 VHFFGPFLYRSEFHATTEEEECERALAHLERVIE----LEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIV 250 (451)
T ss_pred EEeCCCCccccccCCCChHHHHHHHHHHHHHHHH----hcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 222221110 00 11 466777775 112246788888888888899999 8889 999999999
Q ss_pred EEEeCCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcc
Q 037063 315 VLLDATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEI 388 (588)
Q Consensus 315 vvvDaa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~ 388 (588)
+|+|.++.. +. -...+++ .||+++ +-|.+|.+-.-+|++++++++++.+....+.. +.
T Consensus 251 LI~DEV~tGfGRtG~~~a~~~~gv---~PDi~t--~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~-~~---------- 314 (451)
T PRK06062 251 LIADEVMAGFGRTGKWFAIEHFGV---VPDLIT--FAKGVNSGYVPLGGVAISEAIAATFADRPYPG-GL---------- 314 (451)
T ss_pred EEeeccccCCCcCcHHHHHHhcCC---CCCeee--echhhhcCCcCcEEEEEcHHHHHHhccCCCCC-CC----------
Confidence 999999663 21 0122343 489664 68976621012788999988877664211000 00
Q ss_pred cccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHH-HHHHHHHHcccCCCCCCCCCeE-EEeCC
Q 037063 389 IELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLI-NWLANALMNLHHPHSETGIPLV-RIYGP 466 (588)
Q Consensus 389 ~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~-~~l~~~L~~L~h~~~~~g~~~v-~i~~p 466 (588)
-| .| +..+ .++..++|+.+++ +.+.++.+.+. +++.+.|+++... .+.+ .+-
T Consensus 315 ---------T~--~g--npl~---~Aaa~a~L~~l~~---~~l~~~~~~~G~~~l~~~L~~l~~~-----~~~v~~vr-- 368 (451)
T PRK06062 315 ---------TY--SG--HPLA---CAAAVATINAMEE---EGIVENAARIGAEVLGPGLRELAER-----HPSVGEVR-- 368 (451)
T ss_pred ---------CC--CC--CHHH---HHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhc-----CCcEEeEe--
Confidence 01 11 1111 2445567777665 44777777786 5777777775211 1221 221
Q ss_pred CCCCCcccEEEEEeecCCC--CCcC--------HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCc
Q 037063 467 KVMFDRGPSLAFNVFDWNG--TRID--------PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETR 536 (588)
Q Consensus 467 ~~~~~rg~iv~f~~~~~~g--~~i~--------~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~ 536 (588)
..|.++.+.+..... ..++ ...+.+.+.++||.+...
T Consensus 369 ----G~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~----------------------------- 415 (451)
T PRK06062 369 ----GLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVN----------------------------- 415 (451)
T ss_pred ----ccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeec-----------------------------
Confidence 245667776642111 1111 234666677789986421
Q ss_pred CCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 537 SGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 537 ~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.+ .+|+++.+..|.+||+++++.+.+.|+.
T Consensus 416 ~~--~lrl~ppl~~t~~eid~~~~~l~~~l~~ 445 (451)
T PRK06062 416 GN--RIHVVPPCTVTEDEVREGLAILDAALAV 445 (451)
T ss_pred CC--EEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 11 8999999999999999999999998864
No 312
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.36 E-value=3.4e-10 Score=122.45 Aligned_cols=335 Identities=13% Similarity=0.095 Sum_probs=186.6
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+. |.-++.+++++.+.+.... + ++. ..+...
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~----~----------------------------~~~-~~~~~~ 91 (423)
T TIGR00713 45 VDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT----S----------------------------YGA-PTEAEI 91 (423)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC----c----------------------------CCC-CCHHHH
Confidence 368889997543 5667888988876663210 0 000 123456
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEE-EcCCCchhHHHHHHHHHHhcCCE----------
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLL-TVYDHENEAAALMIESSKKRGAR---------- 250 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~---------- 250 (588)
+++++|++++... ..|+|+.|+++|+..++.... +...++|+ ....||. ...++... ...|..
T Consensus 92 ~lae~l~~~~~~~---~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG-~~~~~~~~-~~~~~~~~~~~~~~~~ 166 (423)
T TIGR00713 92 LLAKEIISRVPSV---EMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHG-HHDALLVK-AGSGAATLGLPTSPGV 166 (423)
T ss_pred HHHHHHHHhCCcc---cEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCC-Chhhhhcc-ccCcccccCCCCCCCC
Confidence 8999999987643 259999999999887766421 23345665 4445664 22221110 001111
Q ss_pred -------EEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEe-CCCCCCCccCC----HHHH-HHHHHcCcEEEE
Q 037063 251 -------VSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFP-LQSKVTGARYS----YMWM-SVAAEKGWHVLL 317 (588)
Q Consensus 251 -------v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~-~~sn~tG~~~p----l~~I-~~a~~~g~~vvv 317 (588)
+..++. -++++|++.+.+ . .+++++|++. .++| +|.+.| +++| ++|+++|+++|+
T Consensus 167 ~~~~~~~~~~~~~------~d~~~l~~~i~~----~-~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~ 234 (423)
T TIGR00713 167 PEDFAKLTLVLPY------NDLEALEEVFEE----Y-GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIF 234 (423)
T ss_pred CcccccceEEeCC------CCHHHHHHHHHH----c-CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEE
Confidence 111111 268899988862 1 1456777775 5555 899988 5667 999999999999
Q ss_pred eCCCcCC-CC-CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccc
Q 037063 318 DATALGS-KD-MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLD 395 (588)
Q Consensus 318 Daa~~~~-~d-~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~ 395 (588)
|.++..- .. ......-...+|++ ++.|.+|. ...+|+++.++++++.+.+... ..
T Consensus 235 DEv~~g~r~g~~~~~~~~~~~pDi~--t~sK~l~~-G~pig~v~~~~~i~~~~~~~~~----~~---------------- 291 (423)
T TIGR00713 235 DEVMTGFRVALGGAQEYFGVEPDLT--TLGKIIGG-GLPVGAFGGRREIMERLAPEGP----VY---------------- 291 (423)
T ss_pred EccccccccCcchhHHHhCCCcchh--hhhhhhcC-CCceeeeeEHHHHHHhhCcCCC----ee----------------
Confidence 9996421 10 00000111237844 68998773 3448999999988877653110 00
Q ss_pred ccccccCCCCCccchhhHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 396 ESSQSKFPESSISGVSSKLVECKGLDHADALG-LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 396 ~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G-~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
..+|.....+ ..++..++|+.+++.+ ++.+.+....+.+.|.+.+.++ +.. +.+- .+|.
T Consensus 292 -----~~~T~~~~~~-~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~-~~v~------~~g~ 351 (423)
T TIGR00713 292 -----QAGTLSGNPL-AMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-------GIP-HTVN------RVGS 351 (423)
T ss_pred -----eccCCCCCHH-HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-------CCC-eEEE------eecc
Confidence 0011111111 1244456777665532 2333344444444444444442 111 1111 2456
Q ss_pred EEEEEeecCCCC------CcCH---HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEe
Q 037063 475 SLAFNVFDWNGT------RIDP---ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAA 545 (588)
Q Consensus 475 iv~f~~~~~~g~------~i~~---~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvS 545 (588)
++.+.+...... ..+. ..+.+.+.++||.+..+. . +.+|++
T Consensus 352 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----------------------------~--~~~~l~ 401 (423)
T TIGR00713 352 MFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQ----------------------------F--EACFLS 401 (423)
T ss_pred EEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCC----------------------------c--cceeeE
Confidence 666655421100 0111 235555556899875320 1 267888
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhh
Q 037063 546 LGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 546 lg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+. .+.+||+.+++.|.+++++
T Consensus 402 ~~--~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 402 AA--HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred CC--CCHHHHHHHHHHHHHHHhh
Confidence 65 6999999999999988764
No 313
>PLN00144 acetylornithine transaminase
Probab=99.35 E-value=3.7e-10 Score=120.42 Aligned_cols=330 Identities=13% Similarity=0.099 Sum_probs=193.0
Q ss_pred CCCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
.++..|||..+ .|--.+.+.+++.+.+..-.. . ... + ..+...
T Consensus 12 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~--~---------------------~~~-----~---~~~~~~ 60 (382)
T PLN00144 12 VEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAH--V---------------------SNV-----Y---HTIPQV 60 (382)
T ss_pred CCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCC--c---------------------ccc-----c---cCHHHH
Confidence 36788999754 356677888888766643111 0 000 0 023334
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-C------C------CCeEE-EcCCCchhHHHHHHHHHHhc
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-Y------S------NPRLL-TVYDHENEAAALMIESSKKR 247 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-~------~------gd~ll-~~~e~~s~~~~~~~~~a~~~ 247 (588)
++-+++++.... + .|.|+.++|+|+..++..-. + . + ..+|+ ....||......+ ......
T Consensus 61 ~la~~l~~~~~~--~--~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~-s~~~~~ 135 (382)
T PLN00144 61 ELAKRLVASSFA--D--RVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGAL-ALTSKE 135 (382)
T ss_pred HHHHHHHhcCCC--C--eEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHH-hcCCCc
Confidence 666666666543 2 59999999998876655321 1 0 0 13455 5556775332221 110000
Q ss_pred ------C---CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCc
Q 037063 248 ------G---ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGW 313 (588)
Q Consensus 248 ------G---~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~ 313 (588)
+ -.+..+|.. |++.+++.+.. .+.+.|++.-++++.|...+ +++| ++|+++|+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~------d~~~l~~~~~~-------~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~ 202 (382)
T PLN00144 136 QYRTPFEPLMPGVTFVEYG------NLEAARKLIQK-------GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGA 202 (382)
T ss_pred cccccCCCCCCCeEEeCCC------CHHHHHHhcCC-------CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 0 012233321 57888887751 45667777667888555443 5567 99999999
Q ss_pred EEEEeCCCcC-CCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccc
Q 037063 314 HVLLDATALG-SKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIE 390 (588)
Q Consensus 314 ~vvvDaa~~~-~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~ 390 (588)
++|+|.++.. +.. +-...+....|| +.++.|.+|. ...+|++++++++++.+.+...+ .+
T Consensus 203 llI~DEv~tg~gr~g~~~~~~~~~~~PD--i~t~sK~l~~-G~pig~v~~~~~~~~~~~~~~~~--~T------------ 265 (382)
T PLN00144 203 LLVFDEVQCGLGRTGYLWAHEAYGVEPD--IMTLAKPLAG-GLPIGAVLVTEKVASAINPGDHG--ST------------ 265 (382)
T ss_pred EEEEechhhCCCccchHhhhhhcCCCCC--EEEecccccC-CcceEEEEEcHHHHhccCCCCCC--CC------------
Confidence 9999998543 211 111112223488 7778996662 34589999999887766543221 00
Q ss_pred cccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCC
Q 037063 391 LETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVM 469 (588)
Q Consensus 391 ~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~ 469 (588)
.+..++. .++..+.|+++++ +.+.++++.+.+++.+.|.++-.. .|.+ .+-
T Consensus 266 -----------~~~~pl~----~aaa~a~l~~i~~---~~~~~~~~~~g~~l~~~l~~~~~~-----~~~~~~vr----- 317 (382)
T PLN00144 266 -----------FAGGPLV----CNAALAVLDKISK---PGFLASVAKKGEYLRELLRRKLGG-----NPHVKEVR----- 317 (382)
T ss_pred -----------CCCCHHH----HHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHHHhh-----CCCceeee-----
Confidence 0111111 2445567787765 456777777777777777654111 1111 111
Q ss_pred CCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC
Q 037063 470 FDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL 549 (588)
Q Consensus 470 ~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~ 549 (588)
..|.++.+.+ + .....+...+.++||.+.++. . ..+||+++...
T Consensus 318 -g~G~~~~l~l-~-----~~~~~~~~~~~~~Gv~i~~~~----------------------------~-~~~lrl~p~~~ 361 (382)
T PLN00144 318 -GVGLLVGIQL-D-----VPAGPLVDACRDSGLLVLTAG----------------------------K-GDVVRLVPPLV 361 (382)
T ss_pred -cCceEEEEEe-c-----CccHHHHHHHHHCCeEEeecC----------------------------C-CCEEEEeCCCc
Confidence 2456666666 3 224567777788999987541 0 12899999997
Q ss_pred CCHHHHHHHHHHHHHhhhh
Q 037063 550 TNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 550 ~t~eDv~~li~~l~~~l~~ 568 (588)
.+.+|++.+++.|.+.|.+
T Consensus 362 ~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 362 ISEAELEQAVEILADCLPA 380 (382)
T ss_pred cCHHHHHHHHHHHHHHHHh
Confidence 8899999999999988753
No 314
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=4.3e-11 Score=122.99 Aligned_cols=305 Identities=14% Similarity=0.121 Sum_probs=202.1
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
.+...++.+.+|+|+|.+ +.++|..|-.. ....+-++ +.+|.-|+++.-.|+.++ .-|+.-|+.++....+
T Consensus 181 ~~~hkelE~l~A~f~g~e---~a~vF~mGf~T-Ns~~~p~l-~~~gsLIiSDelNHaSi~----~GaRLSgAtiRVfkHN 251 (519)
T KOG1357|consen 181 TEEHKELEELVARFLGVE---DAIVFSMGFAT-NSMNIPSL-LGKGSLIISDELNHASLI----TGARLSGATTRVFRHN 251 (519)
T ss_pred HHHHHHHHHHHHHhcCCc---ceEEEeccccc-cccCccee-ecCCcceeeccccchhee----ccccccCceEEEEecC
Confidence 677889999999999995 35999988422 23344455 778887888776665343 3356679999988775
Q ss_pred CCCCccCHHHHHHHHhhh----ccc-cCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC------
Q 037063 258 WPNLRIHSGKLMKKIVGK----RKK-KKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK------ 325 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~----~~~-~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~------ 325 (588)
|+++|++.|++. ..+ .+.-+.-+|++....++-|.+..+.++ ++.|++.+++++|+|++++.
T Consensus 252 ------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGr 325 (519)
T KOG1357|consen 252 ------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGR 325 (519)
T ss_pred ------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCc
Confidence 667888887631 111 112345688888899999999999999 99999999999999987751
Q ss_pred C-CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 326 D-MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 326 d-~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
- +.-++.+...+|++.+.|-|.||. +.|++..++++++.++..... +. ++..-.
T Consensus 326 gvce~~g~d~~dvDImMGtftKSfga---~GGyiagsk~lid~lrt~s~~----~~------------------yat~~s 380 (519)
T KOG1357|consen 326 GVCEYFGVDPEDVDIMMGTFTKSFGA---AGGYIAGSKELIDYLRTPSPS----AL------------------YATSLS 380 (519)
T ss_pred ceeeccCCCchhheeecceehhhccc---ccceecCcHHHHhhhccCCCc----ee------------------ecccCC
Confidence 1 122344444589999999999993 458888899988876544321 00 000001
Q ss_pred CCccchhhHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEe
Q 037063 405 SSISGVSSKLVECKGLDHADAL----GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNV 480 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~----G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~ 480 (588)
+++. .....+++.+.-. +.++..+++.....+++..|+++ ++.+||..+ ++++.+.+
T Consensus 381 ppva-----qq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~----------gfivyG~~d----SpVvplll 441 (519)
T KOG1357|consen 381 PPVA-----QQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM----------GFIVYGNND----SPVVPLLL 441 (519)
T ss_pred hHHH-----HHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC----------cEEEecCCC----CCcceeee
Confidence 1111 2223455554321 14667788888889999988874 688999754 56666555
Q ss_pred ecCCCCCcCHHHHHHHHHhCCcEe-ccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHH
Q 037063 481 FDWNGTRIDPALVQKLADRHNISL-SCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLW 559 (588)
Q Consensus 481 ~~~~g~~i~~~~v~~~l~~~gI~v-~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li 559 (588)
.... .+ ..+.+.+.+.+|.+ ..|..|.| +..+ .+|+.....++.||+|+++
T Consensus 442 ~~~~--k~--~~f~r~~l~~nigvVvvgfPatp-------------l~e~-----------r~R~c~Sa~ht~e~ld~~l 493 (519)
T KOG1357|consen 442 YGPA--KI--VAFSREMLERNIGVVVVGFPATP-------------LLES-----------RARFCLSASHTKEDLDRAL 493 (519)
T ss_pred cCcc--cc--cHHHHHHHhcCceEEEEeCCCch-------------HHHh-----------HHHhhhcccccHHHHHHHH
Confidence 4321 11 23445555566654 44555421 2221 6888888889999999999
Q ss_pred HHHHHhhhhh
Q 037063 560 AFVSRFLDAD 569 (588)
Q Consensus 560 ~~l~~~l~~~ 569 (588)
+.+.+.=+.+
T Consensus 494 ~~i~~~g~~~ 503 (519)
T KOG1357|consen 494 EVIDRVGDED 503 (519)
T ss_pred HHHhhhchhh
Confidence 9988754444
No 315
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.34 E-value=1.5e-09 Score=117.84 Aligned_cols=345 Identities=9% Similarity=0.055 Sum_probs=196.9
Q ss_pred CCCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|.++..|||..+. |--.+.+.+++.+.+....... +. . ...+..
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~-----------------------~~--~-----~~~~~~ 99 (441)
T PRK05769 50 DVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYS-----------------------LT--D-----FYYEPA 99 (441)
T ss_pred eCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCcc-----------------------Cc--c-----cCCHHH
Confidence 3468889998655 4445677887766653211100 00 0 012344
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHH-----hc-----CC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSK-----KR-----GA 249 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~-----~~-----G~ 249 (588)
.++-++|.+.+... .-..|.|+.++|+|+..+++.-....|. +|+ ....||......+ .+.. +. -.
T Consensus 100 ~~lAe~L~~~~p~~-~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~l-s~t~~~~~~~~~~~~~~~ 177 (441)
T PRK05769 100 VELAERLVEIAPGG-FEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSL-SLTASKPVQRKGFFPLMP 177 (441)
T ss_pred HHHHHHHHHhCCCC-CCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHH-HhcCCCcccccCCCCCCC
Confidence 57777777776421 1135999999999988776633222344 465 4556665333222 1110 00 01
Q ss_pred EEEEEeccCCCCcc-------------CHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHc
Q 037063 250 RVSSAEFAWPNLRI-------------HSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEK 311 (588)
Q Consensus 250 ~v~~v~~~~~~~~i-------------~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~ 311 (588)
.+..++.. ...+. ..+.+++.+.+ .....++...|++.-+....|.+.| +++| ++|+++
T Consensus 178 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~~~~~--~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~ 254 (441)
T PRK05769 178 GVIHVPYP-NPYRNPWGIENPEECGNAVLDFIEDYLFK--KLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKY 254 (441)
T ss_pred CeEEeCCC-ccccccccCCchHHHHHHHHHHHHHHHHh--hccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 23344432 10000 12334442320 0012356889999999899999999 8899 999999
Q ss_pred CcEEEEeCCCc-CCC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCC
Q 037063 312 GWHVLLDATAL-GSK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSF 385 (588)
Q Consensus 312 g~~vvvDaa~~-~~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~ 385 (588)
|+++++|.++. ++. ....++ ..||++++ .|.+|. ...+|++++++++++.+. ...+ ++
T Consensus 255 g~lli~DEv~tG~gr~G~~~a~~~~g---v~pDivt~--~K~l~~-G~p~gav~~~~~i~~~~~-~~~~--~T------- 318 (441)
T PRK05769 255 GILLIDDEVQTGMGRTGKMFAIEHFG---VEPDIITL--AKAIAG-GLPLGAVIGRAELMFLPP-GSHA--NT------- 318 (441)
T ss_pred CCEEEEechhhCCCcccceehhhccC---CCCCEEEE--cccccC-CcccEEEEEehhhhhcCC-CCCC--CC-------
Confidence 99999999966 221 112223 24898764 596663 344899999988764221 1111 00
Q ss_pred CcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEe
Q 037063 386 SEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIY 464 (588)
Q Consensus 386 ~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~ 464 (588)
| .| +..+ .++..++|+.+++ .+.++++.+.++|++.|.++... .+.+ .+
T Consensus 319 -------------~--~g--~p~~---~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~-----~~~~~~v- 368 (441)
T PRK05769 319 -------------F--GG--NPVA---AAAALATLEELEE----GLLENAQKLGEYLRKELKELKEK-----YEFIGDV- 368 (441)
T ss_pred -------------C--Cc--CHHH---HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHh-----CCCeeee-
Confidence 1 11 1111 2344466666654 56778888888888888776311 1211 11
Q ss_pred CCCCCCCcccEEEEEeecCCCCCc--CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEE
Q 037063 465 GPKVMFDRGPSLAFNVFDWNGTRI--DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVV 542 (588)
Q Consensus 465 ~p~~~~~rg~iv~f~~~~~~g~~i--~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~v 542 (588)
..+|.++.+.+.+...+.. ....+.+.+.++||.+... |...+
T Consensus 369 -----rg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~------------------------------~~~~l 413 (441)
T PRK05769 369 -----RGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGA------------------------------GKSAI 413 (441)
T ss_pred -----ecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEecC------------------------------CCCEE
Confidence 1346677776643211100 1233555666789987431 12389
Q ss_pred EEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 543 TAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 543 RvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
|+++.+..|.+||+++++.+.+.+++
T Consensus 414 r~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 414 RIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998764
No 316
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.33 E-value=3.9e-10 Score=121.05 Aligned_cols=336 Identities=11% Similarity=0.044 Sum_probs=191.0
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
.++..|||..+. |--.+.+.+++.+.+..-.... +. . ..+...
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-----------------------~~---~-----~~~~~~ 85 (408)
T PRK04612 37 DQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTS-----------------------NV---F-----YSAPPL 85 (408)
T ss_pred CCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccc-----------------------cc---c-----CCHHHH
Confidence 368899997644 6667788888876654211100 00 0 023334
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C----C--CCC-eEE-EcCCCchhHHHHHHHHHH----hcCC
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F----Y--SNP-RLL-TVYDHENEAAALMIESSK----KRGA 249 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~----~--~gd-~ll-~~~e~~s~~~~~~~~~a~----~~G~ 249 (588)
++-+++.++... ...|.|+.++++|+..+++... + . ++. +|+ ....||......+ .... +.+.
T Consensus 86 ~la~~L~~~~~~---~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~-s~~~~~~~~~~~ 161 (408)
T PRK04612 86 KLAEELVTASRF---AEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAV-TATAQPKYQEGY 161 (408)
T ss_pred HHHHHHHhhCCC---CCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHH-HhcCCcccccCC
Confidence 566666665532 1359999999998887665321 1 1 223 355 4556776333221 1110 0111
Q ss_pred -----EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC-----HHHH-HHHHHcCcEEEEe
Q 037063 250 -----RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS-----YMWM-SVAAEKGWHVLLD 318 (588)
Q Consensus 250 -----~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p-----l~~I-~~a~~~g~~vvvD 318 (588)
.+..++. -+.+.+++.+.. .+..+|++.-. +.+|-.++ +++| ++|+++|+++|+|
T Consensus 162 ~~~~~~~~~~~~------~d~~~l~~~~~~-------~~~aavi~eP~-~~~gg~~~~~~~~l~~l~~l~~~~g~llI~D 227 (408)
T PRK04612 162 EPLPGGFRYVDF------NDVEALEAAMAG-------GDVAAVMLEPI-QGEGGVMPAAPGFLARVRALCDQHDALLVLD 227 (408)
T ss_pred CCCCCCceEcCC------CCHHHHHHhhCC-------CCEEEEEECCc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 1122222 167888887751 34555555444 34554444 5567 8999999999999
Q ss_pred CCCcC-CCCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccccc
Q 037063 319 ATALG-SKDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDES 397 (588)
Q Consensus 319 aa~~~-~~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~ 397 (588)
.++.. +..-..+......+...+.++.|.+|. ...+|++++++++.+.+.....+ .
T Consensus 228 Ev~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~~-G~piga~~~~~~~~~~~~~~~~~--~-------------------- 284 (408)
T PRK04612 228 EIQCGMGRTGTLFAHWQEQVTPDIVTLAKALGG-GFPIGAMLAGPKVAETMQFGAHG--T-------------------- 284 (408)
T ss_pred ccccCCCcCCchhhhhhcCCCCCEEEEcchhcC-CCceEEEEECHHHHhhhcCCCcC--C--------------------
Confidence 99653 211110110111233345577897763 24489999888776655432211 0
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE
Q 037063 398 SQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA 477 (588)
Q Consensus 398 ~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~ 477 (588)
-| .| +... .++..++|+.+.+ +.+.++++.+.+++.++|.++... .+.+ +. ...+|.++.
T Consensus 285 t~--~~--~p~~---~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~-----~~~i---~~--vrg~Gl~~~ 344 (408)
T PRK04612 285 TF--GG--NPLA---AAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAE-----FGVF---AQ--VRGRGLMLG 344 (408)
T ss_pred CC--CC--CHHH---HHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhh-----CCCe---ee--eeccceEEE
Confidence 01 11 1111 2444566776655 567888888889998888876311 1111 11 013466777
Q ss_pred EEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHH
Q 037063 478 FNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYR 557 (588)
Q Consensus 478 f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~ 557 (588)
+.+..... -....+.+.+.++||.+... |...||+.+++..+.+||++
T Consensus 345 i~~~~~~~--~~a~~i~~~l~~~Gvlv~~~------------------------------g~~~lRl~Ppl~it~eeid~ 392 (408)
T PRK04612 345 AVLAPAHA--GQAGAILDLAAEHGLLLLQA------------------------------GPDVLRFVPALNLTDAELAD 392 (408)
T ss_pred EEecCchh--hHHHHHHHHHHHCCeEEeeC------------------------------CCCEEEEcCCccCCHHHHHH
Confidence 77643110 11345677788899987531 12389999999999999999
Q ss_pred HHHHHHHhhhh
Q 037063 558 LWAFVSRFLDA 568 (588)
Q Consensus 558 li~~l~~~l~~ 568 (588)
+++.+.+.|.+
T Consensus 393 ~l~~l~~~l~~ 403 (408)
T PRK04612 393 GLARLRLALAD 403 (408)
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 317
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.33 E-value=6.9e-10 Score=111.33 Aligned_cols=352 Identities=14% Similarity=0.110 Sum_probs=217.4
Q ss_pred CCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCch--hHHHHHHHHHHHHHhCCC
Q 037063 118 IGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEE--SELESKIRKRIMDFMNIS 195 (588)
Q Consensus 118 a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~--~~~~~~~r~~ia~~lga~ 195 (588)
++-...+.+|++++-.-+... | | .+.+. ..+||+.+ .+++.-++++..+.|+++
T Consensus 47 aSENFts~aVmeAlGS~ltNK-Y----S------------------EGyPG-~RYYGGne~ID~iE~LCq~RALeaF~ld 102 (477)
T KOG2467|consen 47 ASENFTSRAVMEALGSCLTNK-Y----S------------------EGYPG-ARYYGGNEYIDQIELLCQKRALEAFGLD 102 (477)
T ss_pred ecccchHHHHHHHHhHHhhcc-c----c------------------cCCCc-ccccCcchHHHHHHHHHHHHHHHHhCCC
Confidence 556677899999975444321 1 1 12223 33566654 566667788999999999
Q ss_pred CCCceEEEe-cCHHHHHHHHHHhCCCCCCCeEE---EcCCCchhHHHHHHHHHHhcCCEEE-------EEeccCCCCccC
Q 037063 196 EDDYTLVFT-ANQSSAFKLLAESYPFYSNPRLL---TVYDHENEAAALMIESSKKRGARVS-------SAEFAWPNLRIH 264 (588)
Q Consensus 196 ~~e~~vvft-~g~T~al~lv~~s~~~~~gd~ll---~~~e~~s~~~~~~~~~a~~~G~~v~-------~v~~~~~~~~i~ 264 (588)
|+..-|=.. -+++-|.-.+-.++ ++|+++|. .+...|- ++-.+. ..+.+... ...++..+|.||
T Consensus 103 p~kWGVNVQp~SGSPANfavYtal-l~Ph~RiMGLDLP~GGHL-sHGy~T---~~kkISa~SiyFeSmPYkv~~~TG~ID 177 (477)
T KOG2467|consen 103 PEKWGVNVQPYSGSPANFAVYTAL-LKPHERIMGLDLPSGGHL-SHGYQT---PTKKISATSIYFESMPYKVDPSTGYID 177 (477)
T ss_pred HHHCceeeccCCCCchhhHHHhhh-cCCCCeeeeccCCCCCcc-cccccc---CCceeeeeeeecccCceeeCCCCCcee
Confidence 876545444 36677777777788 89999975 2222221 121111 11111111 123455678999
Q ss_pred HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC-----CCCCCCCCCCCCCc
Q 037063 265 SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS-----KDMDTLGLSLFKPD 338 (588)
Q Consensus 265 ~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~-----~d~~~l~l~~~~~D 338 (588)
-|.|++.... -++++++.-.. ..-..+|+..+ ++|.+.|++++.|-||..+ .-.+++. .+|
T Consensus 178 YD~Le~~A~~-------frPk~iiaG~S--aY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFe----y~D 244 (477)
T KOG2467|consen 178 YDKLEKTATL-------FRPKLIIAGTS--AYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFE----YCD 244 (477)
T ss_pred hHHHHHHHHh-------cCCcEEEeccc--cchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccc----ccc
Confidence 9999987652 46777765432 35577899999 9999999999999986554 2235555 389
Q ss_pred EEEeccCc-cCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccc-cccc-cCCCCCccchhhHHH
Q 037063 339 FLICSFYK-IFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDE-SSQS-KFPESSISGVSSKLV 415 (588)
Q Consensus 339 ~vv~S~~K-~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~-~~f~-e~GT~~~~~~~~~~a 415 (588)
++.++.|| +-| |.| |.++.|+..-. ..+.. |. .... +++.+-. ..|- -.|-|.-..| ++
T Consensus 245 iVTTTTHKsLRG--PRg-~mIFyRkGvk~-~~~k~-g~-~i~y---------dlE~kINfaVFP~lQGGPHNhtI---aa 306 (477)
T KOG2467|consen 245 IVTTTTHKSLRG--PRG-AMIFYRKGVKS-IKPKQ-GK-EILY---------DLEDKINFAVFPGLQGGPHNHTI---AA 306 (477)
T ss_pred eeeccccccccC--Ccc-eeEEEeccCCc-CCCCC-CC-ccee---------chhhhhhhhccccccCCCCcchH---HH
Confidence 99999999 557 765 88888886532 22111 10 1110 1111100 0221 2344444444 78
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHH
Q 037063 416 ECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQK 495 (588)
Q Consensus 416 l~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~ 495 (588)
+..||++...-.....++++...+++|.+.|.++ +.+++... ....+|.+.+.. .| ++...+++
T Consensus 307 lAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~----------Gy~lvtgG---TDnHlvLvDLr~-~G--~dGarvE~ 370 (477)
T KOG2467|consen 307 LAVALKQAMTPEFKEYQKQVLKNAKALASALISR----------GYKLVTGG---TDNHLVLVDLRP-KG--VDGARVEK 370 (477)
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc----------CceEecCC---ccceEEEEeccc-cC--CchHHHHH
Confidence 8899998877667888889999999999999985 45555432 223566666654 22 78899999
Q ss_pred HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCC----HHHHHHHHHHHHHhh
Q 037063 496 LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTN----FEDTYRLWAFVSRFL 566 (588)
Q Consensus 496 ~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t----~eDv~~li~~l~~~l 566 (588)
.++.-+|.+--- .| ..+++ ....+.||+..-.+|+ ++|.+++.++|.+.+
T Consensus 371 vle~~~I~~NKN-tv---pGD~S-----------------al~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av 424 (477)
T KOG2467|consen 371 VLELCHIALNKN-TV---PGDKS-----------------ALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAV 424 (477)
T ss_pred HHHHhhhhhcCC-cC---CCCcc-----------------ccCCCceeccchhhcccCccHHHHHHHHHHHHHHH
Confidence 999988864211 00 01110 0111278887766654 689999988887754
No 318
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.33 E-value=1.2e-09 Score=115.41 Aligned_cols=315 Identities=9% Similarity=0.059 Sum_probs=187.8
Q ss_pred CCCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
.++..|||..+ .|.-.+.+++++.+.+..-....+ . + ..+...
T Consensus 21 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~--------------------------~--~---~~~~~~ 69 (364)
T PRK04013 21 SQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGP--------------------------M--F---EHEEKE 69 (364)
T ss_pred CCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccC--------------------------C--c---CCHHHH
Confidence 36788999754 456667888888766643111100 0 0 134456
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCC-CeEE-EcCCCchhHHHHHHHHH----HhcCC-----EE
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSN-PRLL-TVYDHENEAAALMIESS----KKRGA-----RV 251 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~g-d~ll-~~~e~~s~~~~~~~~~a----~~~G~-----~v 251 (588)
++.++++++++.+ .++|++++|+|+.++++......| ++|+ ....||......+ ... .+.+. .+
T Consensus 70 ~la~~l~~~~~~~----~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~l-s~~~~~~~~~~~~p~~~~~ 144 (364)
T PRK04013 70 EMLEELSKWVNYE----YVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGAL-SATWKPKYREDFEPLVPGF 144 (364)
T ss_pred HHHHHHHhhcCCC----EEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhc-cCCCCcccccCCCCCCCCc
Confidence 7788888887652 499999999999988776544455 5655 5666776332221 110 00111 12
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCcCCCC
Q 037063 252 SSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATALGSKD 326 (588)
Q Consensus 252 ~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~~~~d 326 (588)
..+|.+ |.+++++.+. ++++.|++..+...-|...| ++.| ++|+++|+++|+|.++..- .
T Consensus 145 ~~~~~~------d~~~l~~~i~--------~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-R 209 (364)
T PRK04013 145 KHIPFN------DVEAAKEAIT--------KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-R 209 (364)
T ss_pred EEecCC------CHHHHHHHhc--------CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-C
Confidence 233321 5678888886 67889999988877777664 7788 9999999999999996631 1
Q ss_pred CCC---CCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCC
Q 037063 327 MDT---LGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP 403 (588)
Q Consensus 327 ~~~---l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G 403 (588)
... ...-...||++++ -|-+|. ..-+|+++.+++.. +...+ ++ ..|
T Consensus 210 tG~~~a~~~~gv~PDiv~~--gK~lgg-G~P~~a~~~~~~~~----~~~~~--~T----------------------~~g 258 (364)
T PRK04013 210 TGKFLAIEHYKVEPDIVTM--GKGIGN-GVPVSLTLTNFDVE----RGKHG--ST----------------------FGG 258 (364)
T ss_pred CCchhHHHhcCCCCCEEEe--cccccC-CceeEEEEeccccc----CCCcC--CC----------------------CCc
Confidence 111 1111244897776 786652 12367777776641 11111 00 011
Q ss_pred CCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecC
Q 037063 404 ESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDW 483 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~ 483 (588)
|..+ .++..+.|+.+++. .+.+|.+++ |.++.+ +.+ +. -.-+|-++.+.+.+
T Consensus 259 --np~~---~aaa~a~l~~i~~~---~l~~~~~~~-------l~~l~~-------~~v---~~--vRG~Gl~~gve~~~- 310 (364)
T PRK04013 259 --NPLA---CKAVAVTLRILRRE---RLVEKAGEK-------FIEIKG-------ERV---VT--TRGRGLMIGIVLKK- 310 (364)
T ss_pred --CHHH---HHHHHHHHHHHHhc---cHHHHHHHH-------HHHhcc-------Ccc---ee--eeeCcEEEEEEeCC-
Confidence 1111 24444666666653 344444443 223211 111 11 01346677777743
Q ss_pred CCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 484 NGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 484 ~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
....+.+.+.++|+.++.. |..+||+.+.+.-|++|++.+++.|.
T Consensus 311 -----~~~~i~~~~~~~Gll~~~~------------------------------g~~vlr~~Ppl~it~~~i~~~~~~l~ 355 (364)
T PRK04013 311 -----PVGKYVEELQNRGYLVHTA------------------------------GQRVIRLLPPLIISKDTMEEAKSAIE 355 (364)
T ss_pred -----cHHHHHHHHHhCCcEEeeC------------------------------CCCEEEEeCCcccCHHHHHHHHHHHH
Confidence 1345667777789987531 11289999999999999999999999
Q ss_pred Hhhhh
Q 037063 564 RFLDA 568 (588)
Q Consensus 564 ~~l~~ 568 (588)
+.+++
T Consensus 356 ~~l~~ 360 (364)
T PRK04013 356 GVIND 360 (364)
T ss_pred HHHHH
Confidence 98865
No 319
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.31 E-value=3.8e-09 Score=114.14 Aligned_cols=348 Identities=12% Similarity=0.041 Sum_probs=198.7
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+.-|||..+. |--.+.+.+++.+.+........ . ....+...
T Consensus 30 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~------------------------~------~~~~~~~~ 79 (420)
T TIGR00700 30 VDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCF------------------------M------VTPYEGYV 79 (420)
T ss_pred CCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccc------------------------c------ccCChHHH
Confidence 367889997554 66677888888766643111000 0 00023334
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHH-----hcCC-----E
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSK-----KRGA-----R 250 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~-----~~G~-----~ 250 (588)
++-+++++++... ..+.|.|+.++|+|+..+++.-..-.|. +|+ ....||......+ .+.. ..+. .
T Consensus 80 ~la~~l~~~~p~~-~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~-~~~~~~~~~~~~~~~~~~~ 157 (420)
T TIGR00700 80 ALAEKLNRIAPGS-GPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTM-ALTAKVMPYKSGFGPFAPE 157 (420)
T ss_pred HHHHHHHHhCCCC-CCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHH-HhcCCCcccccCCCCCCCC
Confidence 6666777776421 1135999999999887666532222344 355 5556776333332 2110 1111 2
Q ss_pred EEEEeccCCCC------cc----CHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEE
Q 037063 251 VSSAEFAWPNL------RI----HSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHV 315 (588)
Q Consensus 251 v~~v~~~~~~~------~i----~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~v 315 (588)
+..++...... .. +.+.+++.+.. ....++...|++.-+...+|...| +++| ++|+++|+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gill 234 (420)
T TIGR00700 158 VYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVI---DVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVF 234 (420)
T ss_pred cEEeCCCccccccccccchhHHHHHHHHHHHHHh---hcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 33343320000 01 13456655530 112357888999888888999988 7778 9999999999
Q ss_pred EEeCCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccc
Q 037063 316 LLDATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEII 389 (588)
Q Consensus 316 vvDaa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~ 389 (588)
|+|.++.. +. .....+ ..+|+++ +.|.++. ...+|++++++++++.+.+...+ +
T Consensus 235 I~DEV~tg~gr~g~~~a~~~~~---~~pDi~~--lsK~l~~-G~pig~v~~~~~i~~~~~~~~~~--~------------ 294 (420)
T TIGR00700 235 IADEVQTGFARTGAMFACEHEG---PEPDLIT--TAKSLAD-GLPLSGVTGRAEIMDAPAPGGLG--G------------ 294 (420)
T ss_pred EEEecccCCcccchhHHHhhcC---CCCCEEE--eeccccC-CcceEEEEecHHHHhhcCCCCcC--C------------
Confidence 99998543 21 012222 2488654 8997662 35689999999887766432211 0
Q ss_pred ccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCC
Q 037063 390 ELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVM 469 (588)
Q Consensus 390 ~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~ 469 (588)
|.....+ ..++..++|+.+.+ +.+.++.+.+.+++.+.|.++.-. .+.+.-+.
T Consensus 295 --------------T~~~~pl-~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~-----~~~~~~vr---- 347 (420)
T TIGR00700 295 --------------TYAGNPL-ACAAALAVLAIIES---EGLIERARQIGRLVTDRLTTLKAV-----DPRIGDVR---- 347 (420)
T ss_pred --------------CCCcCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhh-----CCCEEEee----
Confidence 1111111 12344466776655 456677777777787777765211 12222111
Q ss_pred CCcccEEEEEeecCC-CCC--cCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec
Q 037063 470 FDRGPSLAFNVFDWN-GTR--IDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL 546 (588)
Q Consensus 470 ~~rg~iv~f~~~~~~-g~~--i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl 546 (588)
..|.++.+.+.+.+ +.. .....+.+.+.++||.+.++.. .+ .+||+++
T Consensus 348 -g~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~---------------------------f~-~~lRl~p 398 (420)
T TIGR00700 348 -GLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGM---------------------------FG-NIIRFLP 398 (420)
T ss_pred -ccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCC---------------------------CC-CEEEEEC
Confidence 24667777664321 110 0123344555689999876411 11 2899999
Q ss_pred CCCCCHHHHHHHHHHHHHhhh
Q 037063 547 GCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 547 g~~~t~eDv~~li~~l~~~l~ 567 (588)
....+.+|++++++.|.++|.
T Consensus 399 ~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 399 PLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred CCCcCHHHHHHHHHHHHHHhh
Confidence 887889999999999998874
No 320
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.31 E-value=2.2e-09 Score=115.93 Aligned_cols=352 Identities=11% Similarity=0.018 Sum_probs=197.8
Q ss_pred CCCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|..+..|||..+. |--.+.+.+++.+.+..-.+..+ .. ...+..
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~---------------------~~---------~~~~~~ 85 (425)
T PRK07495 36 DKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCH---------------------QV---------VPYENY 85 (425)
T ss_pred eCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCccc---------------------Cc---------cCCHHH
Confidence 3368889997554 66778888888766643111000 00 012344
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHH-----HhcC-----C
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESS-----KKRG-----A 249 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a-----~~~G-----~ 249 (588)
.++-+++.+++.-.. ...|.|++++|+|+..+++.-..-.|. +|+ ....||......+ .+. .+.+ .
T Consensus 86 ~~la~~l~~~~p~~~-~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~-~~~~~~~~~~~~~~~~~~ 163 (425)
T PRK07495 86 VRLAERLNALVPGDF-AKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGM-SLTGKVVPYKVGFGAMMP 163 (425)
T ss_pred HHHHHHHHHhCCCCC-CCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHh-hhcCCCcccccCCCCCCC
Confidence 566777777764221 125999999999888766532111333 465 4556665333222 110 0111 1
Q ss_pred EEEEEeccCCCCccC----HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccC-C---HHHH-HHHHHcCcEEEEeCC
Q 037063 250 RVSSAEFAWPNLRIH----SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARY-S---YMWM-SVAAEKGWHVLLDAT 320 (588)
Q Consensus 250 ~v~~v~~~~~~~~i~----~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~-p---l~~I-~~a~~~g~~vvvDaa 320 (588)
.+..+|++.....++ .+++++.+.+ ....++...|++.-+...+|.+. | +++| ++|+++|+++|+|.+
T Consensus 164 ~~~~~~~~~~~~g~~~~~~~~~l~~~~~~---~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 240 (425)
T PRK07495 164 DVYHVPFPVELHGVSVEQSLAALDKLFKA---DVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEV 240 (425)
T ss_pred CeEEecCCcccccccHHHHHHHHHHHHHh---ccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech
Confidence 344555531111122 3344665541 11124566666666655588664 4 4456 899999999999998
Q ss_pred CcC-CCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccccc
Q 037063 321 ALG-SKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDES 397 (588)
Q Consensus 321 ~~~-~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~ 397 (588)
+.. +.. +-........||+ .++.|.+|. ..-+|++++++++++.+.+...+ .+
T Consensus 241 ~tG~gr~G~~~a~~~~gv~pDi--~tlsK~l~~-G~pigav~~~~~i~~~~~~~~~~--~T------------------- 296 (425)
T PRK07495 241 QTGFARTGKLFAMEHHEVAADL--TTMAKGLAG-GFPLAAVTGRAEIMDAPGPGGLG--GT------------------- 296 (425)
T ss_pred hhcCCcCCCceeecccCCCCCE--EeehhhhcC-CccceEEEEcHHHHhccCCCCcC--CC-------------------
Confidence 652 211 1011111223675 667896652 23489999998887766432211 00
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCCCCcccEE
Q 037063 398 SQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVMFDRGPSL 476 (588)
Q Consensus 398 ~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~~~rg~iv 476 (588)
| + .+... .++..++|+++++ +.+.++++.+.++|.++|+++... .|.+ .+- .+|-++
T Consensus 297 -~---~-~~pl~---~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~-----~~~i~~vr------G~Gl~~ 354 (425)
T PRK07495 297 -Y---G-GNPLG---IAAAHAVLDVIEE---EDLCERANQLGNRLKQRLASLRET-----VPEIADIR------GPGFMN 354 (425)
T ss_pred -C---C-CCHHH---HHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHhh-----CCCeeeee------cCceEE
Confidence 0 0 11111 2444577777765 467788888888888888876311 1221 222 235666
Q ss_pred EEEeecCCCCCcC---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHH
Q 037063 477 AFNVFDWNGTRID---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFE 553 (588)
Q Consensus 477 ~f~~~~~~g~~i~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~e 553 (588)
.+.+.+.+...-+ ...+.+.+.++|+.++.. . .+..+||+.+-+..|.+
T Consensus 355 ~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---g-------------------------~~~~~~r~~Ppl~it~~ 406 (425)
T PRK07495 355 AVEFNDADSGLPSAEFANRVRLKALEKGLILLTC---G-------------------------VHGNVIRFLAPITIQDD 406 (425)
T ss_pred EEEEecCCCCCccHHHHHHHHHHHHHCCeEEeec---C-------------------------CCCCEEEEeCCCccCHH
Confidence 6666432210001 234666667799988531 0 10128999999999999
Q ss_pred HHHHHHHHHHHhhhh
Q 037063 554 DTYRLWAFVSRFLDA 568 (588)
Q Consensus 554 Dv~~li~~l~~~l~~ 568 (588)
||+.+++.|.+.|++
T Consensus 407 ~id~~~~~l~~~l~~ 421 (425)
T PRK07495 407 VFAEALDILEASILE 421 (425)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998864
No 321
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.31 E-value=2.8e-09 Score=115.73 Aligned_cols=352 Identities=11% Similarity=0.097 Sum_probs=200.4
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+.-|||..+. |--.+.+.+++.+.+....+... . .. ..+...
T Consensus 46 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-----------------------~--~~-----~~~~~~ 95 (445)
T PRK09221 46 ADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPA-----------------------F--QM-----GHPLAF 95 (445)
T ss_pred CCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccc-----------------------c--cc-----CCHHHH
Confidence 367889998554 66778888888666532111100 0 00 123445
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----CCCC-eEE-EcCCCchhHHHHHH-----HHHHhcC-
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----YSNP-RLL-TVYDHENEAAALMI-----ESSKKRG- 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~~gd-~ll-~~~e~~s~~~~~~~-----~~a~~~G- 248 (588)
++-+++++++.... +.|.|+.++++|+..+++... + +++. +|+ ....||......+. ...+..+
T Consensus 96 ~la~~L~~~~p~~~--~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~ 173 (445)
T PRK09221 96 ELAERLAELAPGGL--DHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGG 173 (445)
T ss_pred HHHHHHHHhCCCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCC
Confidence 67777877764321 359999999998877665321 1 1223 455 55667653222110 0000001
Q ss_pred --CEEEEEeccC--CC--Cc--------cCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHH
Q 037063 249 --ARVSSAEFAW--PN--LR--------IHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAA 309 (588)
Q Consensus 249 --~~v~~v~~~~--~~--~~--------i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~ 309 (588)
..+..+|... .. .. -..+++++.+. ....++...|++.-+....|.+.| +++| ++|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~----~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~ 249 (445)
T PRK09221 174 LLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVA----LHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICD 249 (445)
T ss_pred CCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHH----hcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHH
Confidence 1133343320 00 00 01356777775 112256888999999999999999 8999 9999
Q ss_pred HcCcEEEEeCCCc-CCC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeec
Q 037063 310 EKGWHVLLDATAL-GSK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEP 383 (588)
Q Consensus 310 ~~g~~vvvDaa~~-~~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~ 383 (588)
++|+++|+|.++. ++. -...++ ..||++ .+-|.+|.+-.-+|++++++++++.+...... ...
T Consensus 250 ~~g~llI~DEV~tG~GRtG~~~~~~~~g---v~PDi~--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~---~~~--- 318 (445)
T PRK09221 250 KHGILLIFDEVITGFGRLGAAFAAERFG---VTPDII--TFAKGLTNGAIPMGAVIASDEIYDAFMQGPEY---AIE--- 318 (445)
T ss_pred HcCCEEEEeehhhCCCcCchhhHHHhcC---CCCCEE--EeccccccCcccceeeEEcHHHHHhhccCccc---ccc---
Confidence 9999999999964 331 112233 238965 55685542101168888898887765421000 000
Q ss_pred CCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEE
Q 037063 384 SFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRI 463 (588)
Q Consensus 384 ~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i 463 (588)
+ + ..+|..-..+ .+++..+.|+.+.+ +.+.++.+.+.+++++.|.++. +.+.+.
T Consensus 319 -------~-------~-~~~T~~~~pl-~~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~l~~l~------~~~~v~- 372 (445)
T PRK09221 319 -------F-------F-HGYTYSAHPV-ACAAGLATLDIYRE---EDLFERAAELAPYFEDAVHSLK------GLPHVI- 372 (445)
T ss_pred -------c-------c-cccCCCcCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhhc------cCCCEE-
Confidence 0 0 0112221111 12344466776655 3567889999999999998862 012221
Q ss_pred eCCCCCCCcccEEEEEeecCCCC-CcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEE
Q 037063 464 YGPKVMFDRGPSLAFNVFDWNGT-RIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVV 542 (588)
Q Consensus 464 ~~p~~~~~rg~iv~f~~~~~~g~-~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~v 542 (588)
+ . ...|-+..+.+....+. ......+.+.+.++||.++.+ . ..|
T Consensus 373 --~-v-rg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~-----------------------------~--~~l 417 (445)
T PRK09221 373 --D-I-RNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYT-----------------------------G--DTI 417 (445)
T ss_pred --E-E-ecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeec-----------------------------C--CEE
Confidence 1 0 12344555555432111 111345666677789988642 1 189
Q ss_pred EEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 543 TAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 543 RvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
|+++.+..|++||+++++.|.+.|++
T Consensus 418 r~~Ppl~~t~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 418 ALSPPLIIEKAQIDELVDALGDALRA 443 (445)
T ss_pred EEECCccCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998864
No 322
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.31 E-value=4e-10 Score=121.29 Aligned_cols=304 Identities=16% Similarity=0.092 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccC
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAW 258 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~ 258 (588)
....++.+..|+.+|++ +....++|+|.|++.+..+. .++||.||++.+.|-+...++. ..|+..+++....
T Consensus 70 G~i~eAqe~aA~~fgAd---~tyFvvNGTS~ank~vi~a~-~~~GD~VLvdRN~HKSi~~gli----laGa~Pvyl~p~~ 141 (557)
T COG1982 70 GPIKEAQELAARVFGAD---HTYFVVNGTSTANKAVINAV-LTPGDKVLVDRNCHKSIHHGLI----LAGATPVYLEPSR 141 (557)
T ss_pred ccHHHHHHHHHHHhCCC---ceEEEECCccHHHHHHHHhh-cCCCCEEEecCCccHHHHHHHH----HcCCceEEecCCC
Confidence 45679999999999996 45888999999999999999 9999999999888875665532 3588888886542
Q ss_pred -C----CCccCHHHHHHHHhhhccccCCCcc-eEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCC
Q 037063 259 -P----NLRIHSGKLMKKIVGKRKKKKKKKR-GLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLG 331 (588)
Q Consensus 259 -~----~~~i~~e~l~~~i~~~~~~~~~~~t-~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~ 331 (588)
+ -+.|+.+.+++.+.+. +.. ++++++.+ +..|+.+++++| +.++..+++|.+|.++-+..+..++-
T Consensus 142 np~~gi~ggI~~~~~~~~l~~~------~~~~k~~vitnp-TYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l 214 (557)
T COG1982 142 NPLYGIIGGIPLETFKEALLAH------PDAEKLAVITNP-TYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPML 214 (557)
T ss_pred CccccccCCCCHHHHHHHHHhC------hhhheeEEEecC-ccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccC
Confidence 2 1468999999988731 233 77777765 559999999999 99999999999999966642222221
Q ss_pred --CC-CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc
Q 037063 332 --LS-LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS 408 (588)
Q Consensus 332 --l~-~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~ 408 (588)
.. +.+.|+++-|.||.+|. -+=...|.++.. ..+....+. . .+ ..+ ..++|++.
T Consensus 215 ~~~~~~~~~~~~tqS~HK~l~a-lSQaS~iHv~~~--~~~~~~r~n--e------------a~-----~~h-~STSPsY~ 271 (557)
T COG1982 215 PESALNGGADFVTQSTHKLLAA-LSQASMIHVKDG--RAVNHERFN--E------------AL-----MMH-QSTSPSYP 271 (557)
T ss_pred cchhhhcCceEEEechhhhhhh-hhhhHHHhhCCC--ccCCHHHHH--H------------HH-----HHH-ccCCchHH
Confidence 11 25689999999998873 333455555542 011100000 0 00 011 22333333
Q ss_pred chhhHHHHHHHHHHHHHhCHHHH---HHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCC-CCc------------
Q 037063 409 GVSSKLVECKGLDHADALGLILI---SNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVM-FDR------------ 472 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~~~G~~~i---~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~-~~r------------ 472 (588)
- ++++..|-.+....|...+ ......+++.+++....+ +++.+++|... ...
T Consensus 272 l---~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~---------~~~~~~~~~~~~~~~~whgf~~~~~~~ 339 (557)
T COG1982 272 L---MASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEI---------GFFPVLQPEKLDPPTGWHGFEDYADDQ 339 (557)
T ss_pred H---HHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc---------CCeeeccccccCCcccccccccccccc
Confidence 2 2444443334444443322 445556666777666664 46666666431 000
Q ss_pred ---cc-EEEEEeecCCCCCcCHHHHHHHHHhCCcEe-ccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecC
Q 037063 473 ---GP-SLAFNVFDWNGTRIDPALVQKLADRHNISL-SCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALG 547 (588)
Q Consensus 473 ---g~-iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v-~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg 547 (588)
-| =+++..+. ..++...|++.|+++||.. .++... -.+=++++
T Consensus 340 ~~lDP~Klti~tp~---~Gipg~~v~~~L~e~gii~e~~~d~~-----------------------------~lll~~~~ 387 (557)
T COG1982 340 YFLDPTKLTITTPE---FGIPGAIVAKYLREHGIIPEETGDYS-----------------------------NLLLFSPG 387 (557)
T ss_pred eeccccEEEEecCC---CCCcHHHHHHHHHHcCCeeeecCCce-----------------------------eeEEeeec
Confidence 01 12233322 2388999999999888864 222111 14455555
Q ss_pred CCCCHHHHHHHHHHHHH
Q 037063 548 CLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 548 ~~~t~eDv~~li~~l~~ 564 (588)
.-....+|++|+++.+.
T Consensus 388 ~gk~~~lv~~L~~f~r~ 404 (557)
T COG1982 388 IGKWQTLVDRLLEFKRR 404 (557)
T ss_pred cchHHHHHHHHHHHHHh
Confidence 45566778888887773
No 323
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.31 E-value=1.5e-09 Score=111.62 Aligned_cols=376 Identities=16% Similarity=0.131 Sum_probs=227.7
Q ss_pred CCchhHHHHHhhhccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccc
Q 037063 91 LQTDQADRIRAQDYFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSW 170 (588)
Q Consensus 91 ~~~~~~~~iR~~~f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~ 170 (588)
.+.+.++++|+- .+ ++.+|-.+.|.|.++..+-..+.+++ ..|| .||+ +|-. ....
T Consensus 58 sE~e~l~~l~~i----a~-kN~~~~sfiG~GyY~~~~P~vI~rni----le~p------------ewyT-aYTP--YQpE 113 (450)
T COG0403 58 SEYEALAELKEI----AS-KNKVFTSFIGAGYYDTYTPPVILRNI----LENP------------EWYT-AYTP--YQPE 113 (450)
T ss_pred CHHHHHHHHHHH----Hh-cCchhhhhccCcccCCcCcHHHHHHh----hcCc------------cccc-cCCC--Cchh
Confidence 444566777752 22 56688888888877654333332222 2333 1221 1100 0111
Q ss_pred cccCCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCC--CCeEEEcCCCchhHHHHHHHHHHhcC
Q 037063 171 LQYGSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYS--NPRLLTVYDHENEAAALMIESSKKRG 248 (588)
Q Consensus 171 ~~~g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~--gd~ll~~~e~~s~~~~~~~~~a~~~G 248 (588)
...|. -+.+-+.+..|+++.|.+-.. --.--++|.+-..++.+..... .++++++...|...+.-++..++..|
T Consensus 114 ISQGr--LqaLfefQtlv~dLTGm~VAN--ASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g 189 (450)
T COG0403 114 ISQGR--LEALFEFQTLVADLTGLDVAN--ASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLG 189 (450)
T ss_pred hhhHH--HHHHHHHHHHHHHHhCCCccc--chhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCc
Confidence 11122 455668889999999987443 4455577777777777766555 34577666655557777788888889
Q ss_pred CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCC-ccCCHHHH-HHHHHcCcEEEEeCC--CcCC
Q 037063 249 ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTG-ARYSYMWM-SVAAEKGWHVLLDAT--ALGS 324 (588)
Q Consensus 249 ~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG-~~~pl~~I-~~a~~~g~~vvvDaa--~~~~ 324 (588)
.+++.++.+ +.+++++. + ...+..+++..++ ..| ...++..| +.+|++|++++|=+- ++.-
T Consensus 190 ~~i~~~~~~------d~~~l~~~-~-------~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~L 254 (450)
T COG0403 190 IEIEVVDAD------DLDDLESA-D-------DGDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAADPLALGL 254 (450)
T ss_pred eEEEEeccc------hhhhhhhc-c-------ccCeEEEEEecCC-CCCccchhHHHHHHHHhhcCCEEEEEechhHhhc
Confidence 999988765 56777766 4 1467788887775 688 66679999 999999998887543 2221
Q ss_pred -CCCCCCCCCCCCCcEEEeccCcc---CCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcc-cccccccc-cc
Q 037063 325 -KDMDTLGLSLFKPDFLICSFYKI---FGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEI-IELETLDE-SS 398 (588)
Q Consensus 325 -~d~~~l~l~~~~~D~vv~S~~K~---~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~-~~~~~~~~-~~ 398 (588)
+....+| +|+++++.+.+ +|++.+.+|++.++++...+++-...| ........+.+ ..++.|.. -|
T Consensus 255 L~pPGe~G-----ADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG---~S~D~~G~~A~rLaLQTREQHIR 326 (450)
T COG0403 255 LKPPGEFG-----ADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVG---VSVDAAGKRAFRLALQTREQHIR 326 (450)
T ss_pred cCCccccC-----CceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceee---eeecCCCCchhhhhHHHHHHHHh
Confidence 1234555 99999999983 122233488999999987766655543 22111110000 01111111 02
Q ss_pred cccCCCCCccchhhHHHHHHHHH--HHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE
Q 037063 399 QSKFPESSISGVSSKLVECKGLD--HADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL 476 (588)
Q Consensus 399 f~e~GT~~~~~~~~~~al~~aL~--~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv 476 (588)
- |-.|.|+.....+.++.+++- ++-.-|+.+|.+|+.+++.++.++|++. ..++++.... .=..+
T Consensus 327 R-eKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~--------~~g~~~~~~~----fFdt~ 393 (450)
T COG0403 327 R-EKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEI--------GAGVELVFDH----FFDTF 393 (450)
T ss_pred h-hccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhc--------CCceEecccc----ceeeE
Confidence 2 677899887654555544443 3334479999999999999999999964 1356665431 11223
Q ss_pred EEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHH
Q 037063 477 AFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTY 556 (588)
Q Consensus 477 ~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~ 556 (588)
.+.+.. -..+.+.+.....||-++.-. .. .+=+++.-.+|.+||+
T Consensus 394 ~v~~~~-----~~~~~l~~~~~~~G~~L~~~~----------------------------~~--~~~ia~tEt~t~~~i~ 438 (450)
T COG0403 394 TVRVPE-----EVAEALLAAAIAGGINLRRVD----------------------------AD--TVLIALTETTTKEDID 438 (450)
T ss_pred EEecch-----hHHHHHHHHHHhcCCceeeec----------------------------CC--ceEEEeecccCHHHHH
Confidence 333331 113334455555677765320 11 6778888899999999
Q ss_pred HHHHHHHHh
Q 037063 557 RLWAFVSRF 565 (588)
Q Consensus 557 ~li~~l~~~ 565 (588)
.|++.+...
T Consensus 439 ~l~~~~~~~ 447 (450)
T COG0403 439 ALVAAFGGV 447 (450)
T ss_pred HHHHHHhhh
Confidence 999997653
No 324
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.30 E-value=3.4e-09 Score=115.21 Aligned_cols=351 Identities=10% Similarity=0.041 Sum_probs=195.5
Q ss_pred CCCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+ .|--.+.+.+++.+.+.. . ...+ .. ....+...
T Consensus 53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~-~-~~~~----------------------~~------~~~~~~~~ 102 (443)
T PRK06058 53 VDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVAR-F-THTC----------------------FM------VTPYEGYV 102 (443)
T ss_pred CCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHh-c-cCcc----------------------cc------ccCCHHHH
Confidence 36888999865 456677888887666632 1 1100 00 00124445
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEE-EcCCCchhHHHHHHHHHH-----hcC-----CE
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLL-TVYDHENEAAALMIESSK-----KRG-----AR 250 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll-~~~e~~s~~~~~~~~~a~-----~~G-----~~ 250 (588)
++-+++++.+..... ..+.|+.++++|+..+++... +...++|+ ....||...... ..+.. +.+ ..
T Consensus 103 ~la~~l~~~~p~~~~-~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a-l~~~~~~~~~~~~~~~~~~~ 180 (443)
T PRK06058 103 AVAEQLNRLTPGDHE-KRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLT-MALTAKSMPYKSGFGPFAPE 180 (443)
T ss_pred HHHHHHHHhCCCCCC-CEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHH-HhhcCCCcccccccCCCCCC
Confidence 677777777643211 259999999998887766211 22234565 455566533222 11110 111 11
Q ss_pred EEEEeccCCCCc-----cC-HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeC
Q 037063 251 VSSAEFAWPNLR-----IH-SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDA 319 (588)
Q Consensus 251 v~~v~~~~~~~~-----i~-~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDa 319 (588)
+..++...+... .+ .+.+++.+..-.+....+++..|++.-+....|.+.| ++.| ++|+++|+++|+|.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DE 260 (443)
T PRK06058 181 VYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADE 260 (443)
T ss_pred ceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 223332101000 00 0112121110000001256788888877777788776 6778 99999999999999
Q ss_pred CCcC-CCC-----CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccc
Q 037063 320 TALG-SKD-----MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELET 393 (588)
Q Consensus 320 a~~~-~~d-----~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~ 393 (588)
++.. +.. ...++ ..||+++++ |.+|. ..-+|++++++++++.+.+...+ ++
T Consensus 261 V~tGfgRtG~~fa~~~~g---v~PDiv~~g--K~l~~-G~Pi~av~~~~~i~~~~~~~~~~--~T--------------- 317 (443)
T PRK06058 261 VQTGFARTGAWFACEHEG---IVPDLITTA--KGIAG-GLPLSAVTGRAEIMDAPHPGGLG--GT--------------- 317 (443)
T ss_pred cccCCCcChhhhHHHhcC---CCCCEEEEc--ccccC-CCccEEEEEcHHHHhhccCCCCC--CC---------------
Confidence 9653 210 12223 348998875 96662 23389999999887766533221 10
Q ss_pred ccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCCCCc
Q 037063 394 LDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVMFDR 472 (588)
Q Consensus 394 ~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~~~r 472 (588)
| . .|..+ .++..++|+.+.+ +++.++.+.+.++|.++|+++... .+.+ .+- .+
T Consensus 318 -----~--~--gnpl~---~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~-----~~~i~~vr------g~ 371 (443)
T PRK06058 318 -----Y--G--GNPVA---CAAALAAIETIEE---DDLVARARQIEALMTDRLRALAAE-----DDRIGDVR------GR 371 (443)
T ss_pred -----C--C--CCHHH---HHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHhh-----CCcEEeee------cc
Confidence 0 1 11111 2444466666554 467788888888888888876311 1211 111 35
Q ss_pred ccEEEEEeecCCCCCcC---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC
Q 037063 473 GPSLAFNVFDWNGTRID---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL 549 (588)
Q Consensus 473 g~iv~f~~~~~~g~~i~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~ 549 (588)
|.++.+.+.+.....-+ ...+.+.+.++||.+..+.. .+ .+||+.+.+.
T Consensus 372 G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~---------------------------~~-~~lr~~Ppl~ 423 (443)
T PRK06058 372 GAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGT---------------------------YG-NVIRLLPPLV 423 (443)
T ss_pred ceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCC---------------------------CC-CEEEEECCCc
Confidence 67777776432100001 22344555678998865310 11 2899999999
Q ss_pred CCHHHHHHHHHHHHHhhhh
Q 037063 550 TNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 550 ~t~eDv~~li~~l~~~l~~ 568 (588)
.|.+||+++++.|.+++++
T Consensus 424 ~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 424 IGDELLREGLDVLEAALAD 442 (443)
T ss_pred cCHHHHHHHHHHHHHHHHh
Confidence 9999999999999998754
No 325
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.30 E-value=3.1e-09 Score=114.71 Aligned_cols=351 Identities=12% Similarity=0.069 Sum_probs=198.8
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+. |--.+.+.+++.+.+..-. ... .. ....+...
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~--~~~----------------------~~------~~~~~~~~ 86 (421)
T PRK06777 37 VEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFT--HTA----------------------YQ------IVPYASYV 86 (421)
T ss_pred CCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcc--ccc----------------------cc------ccCChHHH
Confidence 368889998554 6667788888876664311 100 00 00022334
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHHh-----cC-----CE
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSKK-----RG-----AR 250 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~~-----~G-----~~ 250 (588)
++-+++++++... ....++|+.++|+|+..+++.-....|. +|+ ....||....-.+ .+... .+ ..
T Consensus 87 ~la~~l~~~~p~~-~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~-s~t~~~~~~~~~~~~~~~~ 164 (421)
T PRK06777 87 TLAERINALAPID-GPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTM-ALTGKVAPYKVGFGPFPGS 164 (421)
T ss_pred HHHHHHHHhCCCC-CCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHH-hhcCCCcccccCCCCCCCC
Confidence 5666777776431 1125999999999887766533222344 355 4556776333222 11110 00 01
Q ss_pred EEEEeccCCCC----ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCcc-CC---HHHH-HHHHHcCcEEEEeCCC
Q 037063 251 VSSAEFAWPNL----RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGAR-YS---YMWM-SVAAEKGWHVLLDATA 321 (588)
Q Consensus 251 v~~v~~~~~~~----~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~-~p---l~~I-~~a~~~g~~vvvDaa~ 321 (588)
+..++...... .-+.+.+++.+.+ ....++...|++.-+....|.. .| +++| ++|+++|+++|+|.++
T Consensus 165 ~~~~~~p~~~~~~~~~~~~~~l~~~~~~---~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~ 241 (421)
T PRK06777 165 IFHALYPNELHGVSVEEALSSVERLFKA---DIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQ 241 (421)
T ss_pred cEEcCCCccccCcCHHHHHHHHHHHHHh---ccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 22222210000 0124557776651 1122467888888888888864 56 5667 8999999999999985
Q ss_pred cC-CCCCC--CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccc
Q 037063 322 LG-SKDMD--TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESS 398 (588)
Q Consensus 322 ~~-~~d~~--~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~ 398 (588)
.. +..-. ....-...+|++ ++.|.+|. ...+|+++.++++++.+.+...+ +
T Consensus 242 tg~gr~g~~~~~~~~~~~pDiv--~~sK~l~~-G~pigav~~~~~i~~~~~~~~~~--~--------------------- 295 (421)
T PRK06777 242 TGFARTGKLFAMEYYDVKPDLI--TMAKSLGG-GMPISAVVGRAEVMDAPAPGGLG--G--------------------- 295 (421)
T ss_pred hCCccCCchhhhhhcCCCCCEE--eeehhhcC-CCceEEEEEcHHHHhccCCCCCC--C---------------------
Confidence 52 21101 111112248865 68997762 34589999998887766533211 0
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEE
Q 037063 399 QSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAF 478 (588)
Q Consensus 399 f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f 478 (588)
|.....+ ..++..++|+.+++ +.+.++.+.+.+++.++|+++... .+.+.-+ ..+|.++.+
T Consensus 296 -----T~~~~p~-~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~-----~~~i~~v-----rg~G~~~~i 356 (421)
T PRK06777 296 -----TYAGNPL-AVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKAS-----CPAIVDI-----RARGSMVAV 356 (421)
T ss_pred -----CCCcCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEe-----cCceEEEEE
Confidence 1111111 12444567776654 567888888899999888876211 1222222 135667766
Q ss_pred EeecC-CCCCc--CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHH
Q 037063 479 NVFDW-NGTRI--DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDT 555 (588)
Q Consensus 479 ~~~~~-~g~~i--~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv 555 (588)
.+.+. .+..- -...+.+.+.++||.+.++.. .| .+||+++.+..+.|++
T Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~---------------------------~g-~~lr~~ppl~i~~~~i 408 (421)
T PRK06777 357 EFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGV---------------------------HG-NVIRFLYPLTIPDAQF 408 (421)
T ss_pred EEecCccCCccHHHHHHHHHHHHhCCeEEeecCC---------------------------CC-CEEEEeCCCCCCHHHH
Confidence 55431 11100 012344445678999876411 11 2899999888999999
Q ss_pred HHHHHHHHHhhh
Q 037063 556 YRLWAFVSRFLD 567 (588)
Q Consensus 556 ~~li~~l~~~l~ 567 (588)
+++++.|.++|.
T Consensus 409 ~~~~~~l~~~l~ 420 (421)
T PRK06777 409 SKALNILTRLLA 420 (421)
T ss_pred HHHHHHHHHHHh
Confidence 999999998874
No 326
>PRK07678 aminotransferase; Validated
Probab=99.28 E-value=2.7e-09 Score=116.11 Aligned_cols=353 Identities=11% Similarity=0.066 Sum_probs=200.1
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+.-|||..+. |.-.+.+.+++.+.+...... + . . + ..+...+
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~-~-----------------------~--~--~---~~~~~~~ 93 (451)
T PRK07678 45 QGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYF-P-----------------------L--T--Q---SHEPAIK 93 (451)
T ss_pred CCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcc-c-----------------------c--c--c---CCHHHHH
Confidence 68899998654 666778888876665321110 0 0 0 0 1234457
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--C----CCCC-eEE-EcCCCchhHHHHHHHHHHh----c----
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--F----YSNP-RLL-TVYDHENEAAALMIESSKK----R---- 247 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--~----~~gd-~ll-~~~e~~s~~~~~~~~~a~~----~---- 247 (588)
+-++|.+++... ..|.|+.++|+|+..++.... . ++|. +|+ ....||......+ ..... .
T Consensus 94 lae~l~~~~~~~---~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~al-s~~~~~~~~~~~~~ 169 (451)
T PRK07678 94 LAEKLNEWLGGE---YVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGAL-AATGQAQRKYKYEP 169 (451)
T ss_pred HHHHHHHhCCCC---CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHh-hcCCCcccccccCC
Confidence 778888877542 259999999998876665321 1 1233 355 4556665332221 11000 0
Q ss_pred -CCEEEEEeccCCCCcc---------C---HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHH
Q 037063 248 -GARVSSAEFAWPNLRI---------H---SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAA 309 (588)
Q Consensus 248 -G~~v~~v~~~~~~~~i---------~---~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~ 309 (588)
...+..++.. ...+. + .+.+++.|. ....++...|++.-+...-|.+.| ++++ ++|+
T Consensus 170 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~ 244 (451)
T PRK07678 170 LAPGFLHVPPP-DCYRMPGIESEDIYDLECVKEIDRVMT----WELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQ 244 (451)
T ss_pred CCCCCEEeCCC-ccccccccCChHHHHHHHHHHHHHHHH----hcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHH
Confidence 0112333321 10111 1 123555564 112256788888878777888887 6667 8999
Q ss_pred HcCcEEEEeCCCc-CCC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeec
Q 037063 310 EKGWHVLLDATAL-GSK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEP 383 (588)
Q Consensus 310 ~~g~~vvvDaa~~-~~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~ 383 (588)
++|+++|+|.++. ++. -...+|+ .||++++ -|.+|.+-.-+|++++++++++.+.+.... +.
T Consensus 245 ~~g~llI~DEV~tGfGRtG~~~~~~~~gv---~PDivt~--gK~lggG~~Pi~av~~~~~i~~~~~~~~~~--~~----- 312 (451)
T PRK07678 245 KHGALLISDEVICGFGRTGKAFGFMNYGV---KPDIITM--AKGITSAYLPLSATAVKKEIYEAFKGKGEY--EH----- 312 (451)
T ss_pred HcCCEEEEeehhhcCCcCchhHHHHhcCC---CCCEEEe--ecccccCCcceeEEEEcHHHHHHHhccCcc--cc-----
Confidence 9999999999964 331 0123343 4998865 796652101289999999988766432100 00
Q ss_pred CCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-E
Q 037063 384 SFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-R 462 (588)
Q Consensus 384 ~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~ 462 (588)
|.-.+|.+-..+ ..++..++|+.+++ +.+.++++++.++|.+.|.++... .+.+ .
T Consensus 313 ---------------~~h~~T~~gnp~-~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~~~~~-----~~~v~~ 368 (451)
T PRK07678 313 ---------------FRHVNTFGGNPA-ACALALKNLEIMEN---ENLIERSAQLGELLLEQLKEELGE-----HPLVGD 368 (451)
T ss_pred ---------------cccCCCCCcCHH-HHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEE
Confidence 001223222222 12444566666655 456778888888888888653111 1221 1
Q ss_pred EeCCCCCCCcccEEEEEeecCCC--CCcC---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcC
Q 037063 463 IYGPKVMFDRGPSLAFNVFDWNG--TRID---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRS 537 (588)
Q Consensus 463 i~~p~~~~~rg~iv~f~~~~~~g--~~i~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~ 537 (588)
+- .+|.++.+.+..... ...+ ...+...+.++||.+....... ..
T Consensus 369 vr------g~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v------------------------~~ 418 (451)
T PRK07678 369 IR------GKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTV------------------------AG 418 (451)
T ss_pred EE------eeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccc------------------------cC
Confidence 21 346777777643211 1111 2345666778899885421000 01
Q ss_pred CccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 538 GVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 538 g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+...||+++.+..|.+||+++++.+.+.|++
T Consensus 419 ~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~ 449 (451)
T PRK07678 419 YNNVLTLSPPLVISSEEIAFIVGTLKTALER 449 (451)
T ss_pred CCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 1138999999999999999999999988754
No 327
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.28 E-value=2.2e-09 Score=115.80 Aligned_cols=345 Identities=12% Similarity=0.086 Sum_probs=198.6
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+. |--.+.+.+++.+.+....+... +....+...
T Consensus 40 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~------------------------------~~~~~~~~~ 89 (428)
T PRK07986 40 ADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMF------------------------------GGITHPPAI 89 (428)
T ss_pred CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccc------------------------------cccCCHHHH
Confidence 368899998654 55667888887666532111000 000134445
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C----CCC-CeEE-EcCCCchhHHHHHHHHHH-------hcC
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F----YSN-PRLL-TVYDHENEAAALMIESSK-------KRG 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~----~~g-d~ll-~~~e~~s~~~~~~~~~a~-------~~G 248 (588)
++-+++++++...- ..|.|+.++++|+..+++... + ..| .+|+ ....||......+ .+.. ..+
T Consensus 90 ~la~~L~~~~p~~~--~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~-s~~~~~~~~~~~~~ 166 (428)
T PRK07986 90 ELCRKLVAMTPQPL--ECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAM-SVCDPDNSMHSLYK 166 (428)
T ss_pred HHHHHHHhhCCCCc--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhh-cccCCchhhhhccC
Confidence 67777777764322 359999999998877665321 1 123 3455 5556765332221 1100 000
Q ss_pred ---CEEEEEeccCCCC-----ccCHHHHHHHHhhhccccCCCcceEEEEeCC-CCCCCccCC----HHHH-HHHHHcCcE
Q 037063 249 ---ARVSSAEFAWPNL-----RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQ-SKVTGARYS----YMWM-SVAAEKGWH 314 (588)
Q Consensus 249 ---~~v~~v~~~~~~~-----~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~-sn~tG~~~p----l~~I-~~a~~~g~~ 314 (588)
..+..++...... .-|.+++++.|.. ..++...|++.-+ +...|.+.| +++| ++|+++|++
T Consensus 167 ~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~-----~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~l 241 (428)
T PRK07986 167 GYLPENLFAPAPQSRFDGEWDERDIAPFARLMAA-----HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGIL 241 (428)
T ss_pred CCCCCCEEECCCCcccchhhHHHHHHHHHHHHHh-----CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 1122333210000 1245667777751 1245777777764 555676543 6667 999999999
Q ss_pred EEEeCCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcc
Q 037063 315 VLLDATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEI 388 (588)
Q Consensus 315 vvvDaa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~ 388 (588)
+|+|.++.. +. -....+ ..||+++ +-|.+|.+=.-+|++++++++.+.+.....+ .
T Consensus 242 LI~DEv~tG~GrtG~~fa~~~~g---v~PDi~t--~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~---~---------- 303 (428)
T PRK07986 242 LIADEIATGFGRTGKLFACEHAG---IAPDILC--LGKALTGGTMTLSATLTTREVAETISNGEAG---C---------- 303 (428)
T ss_pred EEEeccccCCccCCCeeeecccC---CCCCEEE--echhhhCCcccCcchhchHHHHHHhhcCCCC---c----------
Confidence 999999743 21 012223 3489885 7896552101257778888887766531100 0
Q ss_pred cccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCC
Q 037063 389 IELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKV 468 (588)
Q Consensus 389 ~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~ 468 (588)
|...+|..-..+ ..++..++|+.+++ +.+.++++.+.+++.+.|.++.. .+.+. .
T Consensus 304 ----------~~~~~T~~g~p~-~~aaa~a~L~~i~~---~~~~~~~~~~g~~l~~~l~~l~~------~~~i~---~-- 358 (428)
T PRK07986 304 ----------FMHGPTFMGNPL-ACAVANASLSLLES---GDWQQQVAAIEAQLREELAPLRD------APMVA---D-- 358 (428)
T ss_pred ----------cccCCCCCcCHH-HHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhc------CCCEE---e--
Confidence 000112221111 12444566776665 35688888888999888887621 12221 1
Q ss_pred CCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCC
Q 037063 469 MFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGC 548 (588)
Q Consensus 469 ~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~ 548 (588)
-..+|.++.+.+.+. .....+.+.+.++||.++.. | .+||+.+.+
T Consensus 359 vRg~Gl~~~ve~~~~----~~~~~~~~~l~~~Gl~~~~~------------------------------g-~~i~~~Ppl 403 (428)
T PRK07986 359 VRVLGAIGVVETTRP----VNMAALQRFFVEQGVWIRPF------------------------------G-KLIYLMPPY 403 (428)
T ss_pred EeccceEEEEEeCCc----ccHHHHHHHHHHCCcEEEec------------------------------C-CEEEEeCCC
Confidence 013567888777542 12456777788899988642 1 189999999
Q ss_pred CCCHHHHHHHHHHHHHhhhhh
Q 037063 549 LTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 549 ~~t~eDv~~li~~l~~~l~~~ 569 (588)
..|.|||+++++.|.+.|+++
T Consensus 404 ~it~~ei~~~~~~l~~~l~~~ 424 (428)
T PRK07986 404 IILPEQLQRLTAAVNRAVQDE 424 (428)
T ss_pred CCCHHHHHHHHHHHHHHHhhc
Confidence 999999999999999887553
No 328
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.28 E-value=1.2e-11 Score=126.16 Aligned_cols=176 Identities=14% Similarity=0.141 Sum_probs=125.1
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....++++++|+++||.+ ..+|++++|.|..+++.++ .+|++.|+.....|-..... .......|++++.++.+
T Consensus 28 D~~~~~l~~~i~~l~g~e----~a~f~~sGT~An~~al~~~-~~~~~~vi~~~~aHi~~~E~-ga~~~~~G~~~~~l~~~ 101 (290)
T PF01212_consen 28 DPTTARLEERIAELFGKE----AALFVPSGTMANQLALRAH-LRPGESVICADTAHIHFDET-GAIEELSGAKLIPLPSD 101 (290)
T ss_dssp SHHHHHHHHHHHHHHTSS----EEEEESSHHHHHHHHHHHH-HHTTEEEEEETTEHHHHSST-THHHHHTTCEEEEEBEC
T ss_pred ChhHHHHHHHHHHHcCCC----EEEEeCCCChHHHHHHHHH-HhcCCceeccccceeeeecc-chhhHhcCcEEEECCCc
Confidence 577889999999999984 2679999999999999998 58888877655544211111 12234479999999875
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCC-CccCCHHHH----HHHHHcCcEEEEeCCCc------CCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVT-GARYSYMWM----SVAAEKGWHVLLDATAL------GSKD 326 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~t-G~~~pl~~I----~~a~~~g~~vvvDaa~~------~~~d 326 (588)
++|.+++++|++.+.... ....++++|+++..+|.. |+.+++++| ++||++|++|++|++=+ .+..
T Consensus 102 -~~G~l~~~~l~~~~~~~~--~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~ 178 (290)
T PF01212_consen 102 -DDGKLTPEDLEAAIEEHG--AHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVS 178 (290)
T ss_dssp -TGTBB-HHHHHHHHHHHT--GTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHH
T ss_pred -ccCCCCHHHHHHHhhhcc--ccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhccccc
Confidence 449999999999998311 123578999999988854 899998885 67999999999999922 2211
Q ss_pred CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhc
Q 037063 327 MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASV 367 (588)
Q Consensus 327 ~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~ 367 (588)
+.++- ..+|.+.+|++|-+|. | +-++|+.+++.++.
T Consensus 179 ~~e~~---~~~D~v~~~~tK~~g~-~-~Gavl~~~~~~i~~ 214 (290)
T PF01212_consen 179 LAEIA---AGADSVSFGGTKNGGA-P-GGAVLAGNKEFIAK 214 (290)
T ss_dssp HHHHH---TTSSEEEEETTSTT-S-S-SEEEEEESHHHHHH
T ss_pred HHHHh---hhCCEEEEEEEccccc-c-cceEEEechHHHHH
Confidence 22221 2389999999998774 4 45888888886653
No 329
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=99.28 E-value=1.4e-09 Score=105.64 Aligned_cols=346 Identities=16% Similarity=0.188 Sum_probs=213.7
Q ss_pred CCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHhCCCCC
Q 037063 118 IGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFMNISED 197 (588)
Q Consensus 118 a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~lga~~~ 197 (588)
+|-.-+|.+|+..+..++.. ..+ . +.+-..+|+++. .-..+++++...+.++++++ +
T Consensus 13 aGPAklp~~VL~e~qkdl~n-~~g-~----------GisV~EmSHRsk----------~f~kii~~tes~lreLlniP-d 69 (370)
T KOG2790|consen 13 AGPAKLPESVLLEAQKDLLN-FNG-S----------GISVMEMSHRSK----------DFAKIINDTESLLRELLNIP-D 69 (370)
T ss_pred CCcccCCHHHHHHHHHHhhc-cCC-C----------cceEEEecccch----------hHHHHHHHHHHHHHHHHcCC-C
Confidence 45557899999887666532 111 0 112222333221 22688999999999999995 6
Q ss_pred CceEEEecC-HHHHHHHHHHhCC-CCCCCe---EEEcCCCchhHHHHHHHHHHhcCCEEEEE-eccC-CCCcc-CHHHHH
Q 037063 198 DYTLVFTAN-QSSAFKLLAESYP-FYSNPR---LLTVYDHENEAAALMIESSKKRGARVSSA-EFAW-PNLRI-HSGKLM 269 (588)
Q Consensus 198 e~~vvft~g-~T~al~lv~~s~~-~~~gd~---ll~~~e~~s~~~~~~~~~a~~~G~~v~~v-~~~~-~~~~i-~~e~l~ 269 (588)
+|.|+|..| +|.-+..+...+- ++.|+. |+|..- | ... .+-|++.|..-..+ +... ..+.+ |.+.++
T Consensus 70 n~~vlf~QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsW--S--~KA-~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~ 144 (370)
T KOG2790|consen 70 NYKVLFLQGGGTGQFAAVPLNLIGLKHGRCADYVVTGSW--S--AKA-AEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWE 144 (370)
T ss_pred ceeEEEEeCCCcccccccchhhhccccCCccceEEeccc--c--HHH-HHHHHhhCCceEEeccccccccCcCCChhhcc
Confidence 688888864 5666665555442 355543 555322 1 122 34456666543333 3321 11233 333332
Q ss_pred HHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccCC
Q 037063 270 KKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIFG 349 (588)
Q Consensus 270 ~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~G 349 (588)
+ +++.+.|.++...++.|+-++--- .-.-+|..++.|.++-+- ..++|++. .+.+....+|-.|
T Consensus 145 --~--------~~da~yvyyCaNETVHGVEf~~~P--~~~~~~~vlVaDmSSnfl--SrpvDvsk--~gvi~aGAQKN~G 208 (370)
T KOG2790|consen 145 --L--------NPDASYVYYCANETVHGVEFDFIP--VNDPKGAVLVADMSSNFL--SRPVDVSK--FGVIFAGAQKNVG 208 (370)
T ss_pred --c--------CCCccEEEEecCceeeceecCCCC--CCCCCCceEEEecccchh--cCCccchh--cceEEeccccccC
Confidence 1 156779999999999998775322 123468899999986553 35666665 4678889999999
Q ss_pred CCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHh-CH
Q 037063 350 ENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL-GL 428 (588)
Q Consensus 350 ~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~-G~ 428 (588)
|.|+-+++||++++....+.... .. |+..++.... -.-|++..++ +.+...++++.+- |+
T Consensus 209 --~aG~Tvvivr~dllg~~~~~tP~---v~-------dyk~~~~NnS----lyNTpP~f~i---y~~~Lv~~~il~~GGl 269 (370)
T KOG2790|consen 209 --PAGVTVVIVRKDLLGNALDITPS---VL-------DYKIMDKNNS----LYNTPPCFGI---YVMGLVFEWILEKGGL 269 (370)
T ss_pred --ccccEEEEEehhhhcccccCCcc---cc-------ceeeeccccc----cccCCCeeee---eehhhHHHHHHhcccH
Confidence 88999999999997644332110 00 0111111111 1347777776 7788899988775 58
Q ss_pred HHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc-cEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccc
Q 037063 429 ILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG-PSLAFNVFDWNGTRIDPALVQKLADRHNISLSCG 507 (588)
Q Consensus 429 ~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg-~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G 507 (588)
..+.+-..+-++.+++.|.+- .++-. .|-++..|+ --|.|++.+.. +..+.+.+.++++=|.+- |
T Consensus 270 ~a~e~~n~~KskllYd~iD~s---------~gfy~-cpVe~~~RS~MNV~Fri~~d~---Le~eFLkeA~~~~mv~LK-G 335 (370)
T KOG2790|consen 270 AAMEKLNQEKSKLLYDAIDNS---------NGFYR-CPVEPSVRSRMNVPFRIEKDE---LEAEFLKEAAKEHMVQLK-G 335 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---------CCeEE-cccchhhhhhcccceeecchH---HHHHHHHHHHHhhhhccc-c
Confidence 889988889999999999873 23321 233333444 56778887522 444445555555544442 2
Q ss_pred cccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 508 FLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 508 ~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+ ..++.||.|+--.-+.|++++|++++++|.+.
T Consensus 336 h----------------------------RSVGGiRASlYNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 336 H----------------------------RSVGGIRASLYNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred c----------------------------cccccchhhhhccccHHHHHHHHHHHHHHHHh
Confidence 1 11238999998888999999999999999764
No 330
>PRK12403 putative aminotransferase; Provisional
Probab=99.28 E-value=2.3e-09 Score=116.86 Aligned_cols=350 Identities=13% Similarity=0.089 Sum_probs=197.5
Q ss_pred CCCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+ .|.-.+.+++++.+.+..-...+. . ++. ..+...
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~-----------------------~-----~~~-~~~~~~ 101 (460)
T PRK12403 51 NDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNM-----------------------F-----FHT-THPAVI 101 (460)
T ss_pred CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeec-----------------------c-----ccc-CCHHHH
Confidence 36788999543 456667888887666643111100 0 000 134556
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----CCCCe-EEE-cCCCchhHHHHHHHHHHh---c--C-
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----YSNPR-LLT-VYDHENEAAALMIESSKK---R--G- 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~~gd~-ll~-~~e~~s~~~~~~~~~a~~---~--G- 248 (588)
++-+++++++...- ..++|+.++|+|+..++.... + ++++. |+. ...||......+ .+... . +
T Consensus 102 ~lae~L~~~~p~~~--~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~-s~s~~~~~~~~~~ 178 (460)
T PRK12403 102 ELSELLFSLLPGHY--SHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAAT-ALGGMKFMHEMGG 178 (460)
T ss_pred HHHHHHHHhCCCCc--CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhh-hcCCCccccccCC
Confidence 78888888876422 249999999999887776542 1 23334 443 345565333322 11100 0 0
Q ss_pred --CEEEEEeccCCC---Ccc--------CHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHH
Q 037063 249 --ARVSSAEFAWPN---LRI--------HSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAE 310 (588)
Q Consensus 249 --~~v~~v~~~~~~---~~i--------~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~ 310 (588)
-.+..+|..... ..+ +.+++++.+. +...++...|++.-+...-|.+.| ++.+ ++|++
T Consensus 179 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~----~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~ 254 (460)
T PRK12403 179 LIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKIL----ELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQ 254 (460)
T ss_pred CCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHH----HhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 012333321000 001 1245655554 112246778888888888899998 8889 99999
Q ss_pred cCcEEEEeCCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecC
Q 037063 311 KGWHVLLDATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPS 384 (588)
Q Consensus 311 ~g~~vvvDaa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~ 384 (588)
+|+++|+|.++.. +. -.+.+|+ .||+++ +-|-+|.+-.-+|++++++++.+.+.... + .
T Consensus 255 ~g~lLI~DEV~tGfGRtG~~~a~e~~gv---~PDiv~--~gK~lggG~~Piga~v~~~~i~~~~~~~~-~---~------ 319 (460)
T PRK12403 255 YDVLLCADEVIGGFGRTGEWFAHEHFGF---EPDTLS--IAKGLTSGYVPMGGLVLSKRIAEALVEQG-G---V------ 319 (460)
T ss_pred cCCEEEEeccccCCCcCchhhhhhhcCC---CCCeEE--EcccccccccceEEEEECHHHHHHHhcCC-C---c------
Confidence 9999999999743 21 1123343 389886 78966621013788888888766553211 0 0
Q ss_pred CCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHH-HHHHHHHHHHHcccCCCCCCCCCeEEE
Q 037063 385 FSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRAR-YLINWLANALMNLHHPHSETGIPLVRI 463 (588)
Q Consensus 385 ~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~-~L~~~l~~~L~~L~h~~~~~g~~~v~i 463 (588)
|.-.+|..-..+ ..++..++|+.+++ +.+.++++ .+.++|.+.|+++... .+.+.-
T Consensus 320 --------------~~~~~T~~gnPl-~~Aaala~L~~i~~---~~l~~~~~~~~g~~l~~~L~~l~~~-----~~~i~~ 376 (460)
T PRK12403 320 --------------FAHGLTYSGHPV-AAAVAIANLKALRD---EGVVTRVKDDTGPYLQRCLREVFGD-----HPLVGE 376 (460)
T ss_pred --------------cccCCCCCCCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEe
Confidence 000122111111 12445566777665 34567775 7777887777665211 122211
Q ss_pred eCCCCCCCcccEEEEEeecCCC--CCcC-----HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCc
Q 037063 464 YGPKVMFDRGPSLAFNVFDWNG--TRID-----PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETR 536 (588)
Q Consensus 464 ~~p~~~~~rg~iv~f~~~~~~g--~~i~-----~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~ 536 (588)
+ ..+|.++.+.+.+... .... ...+...+.++||.++..
T Consensus 377 v-----rG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------------------------- 422 (460)
T PRK12403 377 V-----QGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST----------------------------- 422 (460)
T ss_pred E-----eecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec-----------------------------
Confidence 1 1346677776643211 1111 112334456688887531
Q ss_pred CCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 537 SGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 537 ~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.+ .+|+++.+..|.+||+++++.+.+.|++
T Consensus 423 ~~--~~~l~Ppl~it~~eid~~~~~l~~al~~ 452 (460)
T PRK12403 423 LG--RMIMAPALVAGRAEIDELVDKTRIAVDR 452 (460)
T ss_pred CC--EEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 11 6899999999999999999999998875
No 331
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.27 E-value=5.2e-10 Score=118.21 Aligned_cols=240 Identities=14% Similarity=0.148 Sum_probs=139.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCC--CeEEE-cCCCchhHHHHHHHHHHhcCCEEEEE
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSN--PRLLT-VYDHENEAAALMIESSKKRGARVSSA 254 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~g--d~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v 254 (588)
-+.+-+....|+++.|.+... .-+-.++|++-..+..+.....+ ++++. ..-|+. ...-+..+++..|.+++.+
T Consensus 109 Lq~lfe~Qs~i~eLTGmdvaN--aSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~-~~~v~~t~a~~~g~~iv~~ 185 (429)
T PF02347_consen 109 LQALFEYQSMICELTGMDVAN--ASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQ-TRAVLRTYAAPLGIEIVEV 185 (429)
T ss_dssp HHHHHHHHHHHHHHHTSSEE---SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CH-HHHHHHHHCCHCCEEEEEE
T ss_pred HHHHHHHHHHHHHhhCCCccC--CCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChh-hHHHHHHhhhhCCeEEEEe
Confidence 567779999999999996321 23445777655555444333333 36554 444554 4445566777889999999
Q ss_pred eccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCc---CC-CCCCC
Q 037063 255 EFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATAL---GS-KDMDT 329 (588)
Q Consensus 255 ~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~---~~-~d~~~ 329 (588)
+.+ +++..+ + +++..|++..++ ..|.+.++++| +++|++|.++++ ++-. .. +....
T Consensus 186 ~~~-~~~~~d--------~--------~~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge 246 (429)
T PF02347_consen 186 PLD-EDGTTD--------D--------DDTAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSPGE 246 (429)
T ss_dssp -BB-TTCSB---------S--------TTEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGG
T ss_pred ccc-ccCCcc--------c--------cCeEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhh
Confidence 987 555554 4 789999999885 69999999999 999999999988 6622 22 12344
Q ss_pred CCCCCCCCcEEEeccCccCCC----CCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcc-cccccccc-cccccCC
Q 037063 330 LGLSLFKPDFLICSFYKIFGE----NPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEI-IELETLDE-SSQSKFP 403 (588)
Q Consensus 330 l~l~~~~~D~vv~S~~K~~G~----~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~-~~~~~~~~-~~f~e~G 403 (588)
+| +|+++.+ ||-||. +..|.|++.+++++...++-...| ..........+ ..+..+.. -|- |-.
T Consensus 247 ~G-----ADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG---~t~D~~G~~~~~ltLqtREQHIrR-eKA 316 (429)
T PF02347_consen 247 YG-----ADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVG---QTKDADGKRAFVLTLQTREQHIRR-EKA 316 (429)
T ss_dssp GT------SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEE---EEEBCCCSCCEEEE-GGGTCHHHG-CCS
T ss_pred cC-----ccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceec---ccccccccceeeeccccccccccc-cch
Confidence 44 9999666 775553 234689999999988877765543 21111110000 11111211 022 667
Q ss_pred CCCccchhhHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHHHHcc
Q 037063 404 ESSISGVSSKLVECKGL--DHADALGLILISNRARYLINWLANALMNL 449 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL--~~l~~~G~~~i~~r~~~L~~~l~~~L~~L 449 (588)
|.|+..-..+.++.+++ -++-.-|+.++.+++...++|+.++|+++
T Consensus 317 tSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 317 TSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp TT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred hhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88876543233332222 22333469999999999999999999984
No 332
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.27 E-value=4.9e-09 Score=113.24 Aligned_cols=346 Identities=10% Similarity=0.043 Sum_probs=199.6
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
.++.-|||..+. |--.+.+.+++.+.+........ . ....+...
T Consensus 41 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~---------------------~---------~~~~~~~~ 90 (429)
T PRK06173 41 KDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMF---------------------G---------GFTHEPAV 90 (429)
T ss_pred CCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccc---------------------c---------ccCCHHHH
Confidence 368889997654 55667788877665532110000 0 00134445
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----CCCCe-EE-EcCCCchhHHHHHHHHH-----Hhc--
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----YSNPR-LL-TVYDHENEAAALMIESS-----KKR-- 247 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~~gd~-ll-~~~e~~s~~~~~~~~~a-----~~~-- 247 (588)
++-+++++.+...- ..|.|+.++++|+..++.... + ++|.+ |+ ....||......+. +. .+.
T Consensus 91 ~lae~L~~~~p~~~--~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s-~~~~~~~~~~~~ 167 (429)
T PRK06173 91 ELAQKLLEILPPSL--NKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMS-VCDPVTGMHGLF 167 (429)
T ss_pred HHHHHHHhhCCCCc--CEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhc-cCCCchhhhhcc
Confidence 77777777764222 359999999998876655321 1 13443 55 45566653221111 10 000
Q ss_pred C---CEEEEEeccCCC-----CccCHHHHHHHHhhhccccCCCcceEEEEeCC-CCCCCccCC----HHHH-HHHHHcCc
Q 037063 248 G---ARVSSAEFAWPN-----LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQ-SKVTGARYS----YMWM-SVAAEKGW 313 (588)
Q Consensus 248 G---~~v~~v~~~~~~-----~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~-sn~tG~~~p----l~~I-~~a~~~g~ 313 (588)
+ ..+..+|..... ..-+.+.|++.|.. ..++...|++.-+ +..-|.+.| ++++ ++|+++|+
T Consensus 168 ~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~-----~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~ 242 (429)
T PRK06173 168 NHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQ-----KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGV 242 (429)
T ss_pred cccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHh-----CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCC
Confidence 0 112334331000 00134556677751 1246788888875 777788754 3336 88999999
Q ss_pred EEEEeCCCcC-CCC-----CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCc
Q 037063 314 HVLLDATALG-SKD-----MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSE 387 (588)
Q Consensus 314 ~vvvDaa~~~-~~d-----~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~ 387 (588)
++|+|.++.. +.. ...++ ..||+++ +-|.+|.+=.-+|.+++++++.+.+.+....
T Consensus 243 llI~DEv~tG~GrtG~~~a~~~~g---v~PDiv~--~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~------------- 304 (429)
T PRK06173 243 LLIFDEIATGFGRTGKLFALEHAG---VVPDIMC--IGKALTGGYLTLSATITTEAIAQTICSGEAK------------- 304 (429)
T ss_pred eEEecchhcCCCcCCcchHHHhcC---CCCCEEE--eehhhhCCccccceEEecHHHHHHHhcCCCC-------------
Confidence 9999999742 210 11223 2489876 7896552101258888888877655421100
Q ss_pred ccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCC
Q 037063 388 IIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPK 467 (588)
Q Consensus 388 ~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~ 467 (588)
.|.-.+|.....+ ..++..++|+.+++. .+.++++++.++|.+.|.++. +.+.+. .
T Consensus 305 ----------~~~~~~T~~g~p~-~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~~~------~~~~v~---~- 360 (429)
T PRK06173 305 ----------CFMHGPTFMANPL-ACAIAAESIRLLLES---PWQQNIQRIEAQLKQELAPAA------EFDSVA---E- 360 (429)
T ss_pred ----------ccccCCCCCcCHH-HHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhh------cCCCee---e-
Confidence 0001112111111 124555677777653 457888888888988887641 112221 0
Q ss_pred CCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecC
Q 037063 468 VMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALG 547 (588)
Q Consensus 468 ~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg 547 (588)
. ..+|.++.+.+.+. .....+.+.|.++||.++.. | .+||+.+-
T Consensus 361 v-Rg~Gl~~~iel~~~----~~~~~i~~~l~e~Gi~v~~~------------------------------g-~~l~~~Pp 404 (429)
T PRK06173 361 V-RVLGAIGVVEMKEP----VNMATLQPRFVEHGIWVRPF------------------------------G-KLVYIMPP 404 (429)
T ss_pred e-eccceEEEEEeCCc----ccHHHHHHHHHHCCeEEEec------------------------------C-CEEEEeCC
Confidence 0 13577888887642 23456777888899988642 1 18999999
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhh
Q 037063 548 CLTNFEDTYRLWAFVSRFLDADF 570 (588)
Q Consensus 548 ~~~t~eDv~~li~~l~~~l~~~~ 570 (588)
+..|.+||+++++.|.+.|++-+
T Consensus 405 l~it~~ei~~~~~~l~~~l~~~~ 427 (429)
T PRK06173 405 FIISPDELSQLTSGLLRVLKQEY 427 (429)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999987643
No 333
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.27 E-value=1.9e-09 Score=105.60 Aligned_cols=307 Identities=14% Similarity=0.134 Sum_probs=182.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--CCCCCe--EEEcC--CCchhHHHHHHHHHHhcCCE-
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--FYSNPR--LLTVY--DHENEAAALMIESSKKRGAR- 250 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--~~~gd~--ll~~~--e~~s~~~~~~~~~a~~~G~~- 250 (588)
..+++.+.+.+.+-+|.+-++..|.+|+|+..++..++.-|. ...|++ |+.+. ||-. ++. .|.+
T Consensus 77 ~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiG--------Y~d-~~l~~ 147 (417)
T COG3977 77 AVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIG--------YAD-AGLEE 147 (417)
T ss_pred hHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhcc--------ccc-cccCc
Confidence 456666666666667766555679999999999888877664 234554 65432 3221 110 0110
Q ss_pred EEEEeccC-----C----CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEE
Q 037063 251 VSSAEFAW-----P----NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLL 317 (588)
Q Consensus 251 v~~v~~~~-----~----~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvv 317 (588)
=.+|...+ + ..++|.++|. +. +.+++|+++-+.|+||.++.-+++ ++|++||+++++
T Consensus 148 d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~--------e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliI 217 (417)
T COG3977 148 DLFVSAKPNIELLPAGQFKYHVDFEHLH--IG--------ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLII 217 (417)
T ss_pred cceeeccCCcccccccceeeccCHHHcc--cc--------cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEE
Confidence 01121110 1 1234555443 22 689999999999999999987775 679999999999
Q ss_pred eCCCcCCC---CCCCCCCCCCCCc-EEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccc
Q 037063 318 DATALGSK---DMDTLGLSLFKPD-FLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELET 393 (588)
Q Consensus 318 Daa~~~~~---d~~~l~l~~~~~D-~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~ 393 (588)
|.|-.+|. ...+..+ .|+.. +++.|.+| +|.+..++|+++.++++++.+.... |.++..+.
T Consensus 218 DnAYg~PFP~iifsd~~~-~w~~NiilC~SLSK-~GLPG~R~GIiIane~viqaitnmn----~iisLap~--------- 282 (417)
T COG3977 218 DNAYGVPFPGIIFSDATP-LWNENIILCMSLSK-LGLPGSRCGIIIANEKVIQAITNMN----GIISLAPG--------- 282 (417)
T ss_pred ecccCCCCCceecccccc-cCCCCEEEEeehhh-cCCCCcceeEEEccHHHHHHHHhcc----ceeeecCC---------
Confidence 99987772 1111111 23444 45669999 5554568999999999988776554 44443321
Q ss_pred ccccccccCCCCCccchhhHHHHHHHHH--HHHHhCHHHH----HHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCC
Q 037063 394 LDESSQSKFPESSISGVSSKLVECKGLD--HADALGLILI----SNRARYLINWLANALMNLHHPHSETGIPLVRIYGPK 467 (588)
Q Consensus 394 ~~~~~f~e~GT~~~~~~~~~~al~~aL~--~l~~~G~~~i----~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~ 467 (588)
++ +- +..+..++ .+.++.-+-| .++.+.....|+..|-+ ..+.|.-|
T Consensus 283 ----~~---------G~---Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~----------~~~~iHkp- 335 (417)
T COG3977 283 ----RM---------GP---AIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPE----------YRCLIHKP- 335 (417)
T ss_pred ----Cc---------cH---HHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCc----------cceeeecC-
Confidence 11 00 11112222 1111111111 22333333333433333 23555543
Q ss_pred CCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecC
Q 037063 468 VMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALG 547 (588)
Q Consensus 468 ~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg 547 (588)
.|.|+.+.-++ ..+++..++...|++.|+.+-+|..-=+|....+ .....++|+|
T Consensus 336 ----EGAIFlWLWf~--dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ew-----------------pH~hqC~Rmn-- 390 (417)
T COG3977 336 ----EGAIFLWLWFK--DLPITTEELYQRLKARGVLMVPGHYFFPGLDKEW-----------------PHTHQCMRMN-- 390 (417)
T ss_pred ----Ccceeehhhhc--cCCCCHHHHHHHHHhCeEEEecccccCCCCCCCC-----------------CCccceEEEe--
Confidence 46776654322 3458889999999999999999965544332211 0112399999
Q ss_pred CCCCHHHHHHHHHHHHHhhhhhh
Q 037063 548 CLTNFEDTYRLWAFVSRFLDADF 570 (588)
Q Consensus 548 ~~~t~eDv~~li~~l~~~l~~~~ 570 (588)
+.-+.+.|++-++.|.+-+++-|
T Consensus 391 ~~~~~~~ie~Gva~lae~ve~~y 413 (417)
T COG3977 391 YVPEPEKIEKGVAILAEEVERAY 413 (417)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHH
Confidence 45589999999999988776654
No 334
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.26 E-value=7.6e-09 Score=111.99 Aligned_cols=350 Identities=9% Similarity=0.053 Sum_probs=188.7
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
.++..|||..+. |.-.+.+.+++.+.+........ . . .+ .....
T Consensus 38 ~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~------------------------~-~--~~---~~~~~ 87 (425)
T PRK08088 38 VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCF------------------------Q-V--LA---YEPYL 87 (425)
T ss_pred CCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccc------------------------c-c--cC---CHHHH
Confidence 367889999664 55577888887666532111000 0 0 00 11223
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeE-EEcCCCchhHHHHHHHHHHh-----cCC-----E
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRL-LTVYDHENEAAALMIESSKK-----RGA-----R 250 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~l-l~~~e~~s~~~~~~~~~a~~-----~G~-----~ 250 (588)
++-+.+.+..+.+.. ..++|+.++++|+..++.... +....+| .....||...... ...-.. .|. .
T Consensus 88 ~la~~l~~~~~~~~~-~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~-~~~~~~~~~~~~~~~~~~~~ 165 (425)
T PRK08088 88 ELCEKMNQKVPGDFA-KKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYT-LALTGKVNPYSAGMGLMPGH 165 (425)
T ss_pred HHHHHHHHhCCCCCC-CEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHH-HHhhCCCCccccCCCCCCCC
Confidence 555556666554321 258888888885544333211 2223344 4555666532222 111000 010 0
Q ss_pred EEE--EeccCCCCccC----HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeC
Q 037063 251 VSS--AEFAWPNLRIH----SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDA 319 (588)
Q Consensus 251 v~~--v~~~~~~~~i~----~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDa 319 (588)
+.. +|.+. + .++ .++|++.+.. ....++...|++.-+...-|.+.+ +++| ++|+++|+++|+|.
T Consensus 166 ~~~~~~p~~~-~-~~~~~~~~~~l~~~l~~---~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~De 240 (425)
T PRK08088 166 VYRALYPCPL-H-GVSEDDAIASIERIFKN---DAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADE 240 (425)
T ss_pred cEEcCCCccc-c-CccHHHHHHHHHHHHHh---ccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 111 22211 1 122 3457777751 011245677777777777788777 7778 99999999999999
Q ss_pred CCcC-CCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccc
Q 037063 320 TALG-SKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDE 396 (588)
Q Consensus 320 a~~~-~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~ 396 (588)
++.. +.. +..++.....+| +.|+.|.+|. ...+|+++.++++++.+.....+ .
T Consensus 241 v~~g~g~~g~~~~~~~~~~~pd--i~s~sK~l~~-G~rig~v~~~~~~~~~~~~~~~~--~------------------- 296 (425)
T PRK08088 241 VQTGAGRTGTLFAMEQMGVAAD--LTTFAKSIAG-GFPLAGVTGRAEVMDAIAPGGLG--G------------------- 296 (425)
T ss_pred cccCCCcCcchhHHhhcCCCCC--EEEEeccccC-CCcceeeEecHHHHhhcCCCCCC--C-------------------
Confidence 8552 211 111111122356 5788997773 35589999998887766543211 0
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE
Q 037063 397 SSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL 476 (588)
Q Consensus 397 ~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv 476 (588)
..+..++ ....++..++....+.+.++++.+.+++.+.|..+... .|.+.... ..|.++
T Consensus 297 ----t~~~~~~-------~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-----~~~~~~v~-----g~G~~~ 355 (425)
T PRK08088 297 ----TYAGNPI-------ACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEK-----HPEIGDVR-----GLGAMI 355 (425)
T ss_pred ----CCCcCHH-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEe-----ccceEE
Confidence 0111111 12233344443334566777777777777777665211 12221111 126666
Q ss_pred EEEeecCCC----CCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCH
Q 037063 477 AFNVFDWNG----TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNF 552 (588)
Q Consensus 477 ~f~~~~~~g----~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~ 552 (588)
.+.+.+... .......+.+.+.++||.+..+.. . ..+||+++....+.
T Consensus 356 ~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~---------------------------~-~~~iRl~~~~~~t~ 407 (425)
T PRK08088 356 AIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGP---------------------------Y-YNVLRILVPLTIED 407 (425)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCC---------------------------C-CCEEEEECCCCcCH
Confidence 676632110 011234566666778988753210 0 12899999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 037063 553 EDTYRLWAFVSRFLDA 568 (588)
Q Consensus 553 eDv~~li~~l~~~l~~ 568 (588)
+||++.++.|.+.+++
T Consensus 408 ~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 408 AQIRQGLEIIAQCFDE 423 (425)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988754
No 335
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.26 E-value=3.6e-09 Score=114.91 Aligned_cols=347 Identities=10% Similarity=0.068 Sum_probs=198.7
Q ss_pred CCCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+ .|--.+.+.+++.+.+.......+ .. . ..+...
T Consensus 39 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~---------------------~~----~-----~~~~~~ 88 (445)
T PRK08593 39 VDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTP---------------------AY----M-----YHEPLV 88 (445)
T ss_pred CCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccc---------------------cc----c-----CCHHHH
Confidence 36888999754 355567888887666533111000 00 0 134455
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHH-----hc--C---CE
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSK-----KR--G---AR 250 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~-----~~--G---~~ 250 (588)
++-++|++.+.... ...|.|+.++++|+..+++....-.|. +|+ ....||......+ .+.. +. + ..
T Consensus 89 ~lae~L~~~~p~~~-~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~al-s~s~~~~~~~~~~~~~~~~ 166 (445)
T PRK08593 89 RLAKKLCELAPGDF-EKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSL-SMSGISLNMRRKYGPLLPG 166 (445)
T ss_pred HHHHHHHHhCCCCC-CCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHH-hhcCCCcccccCCCCCCCC
Confidence 77778888764321 135999999999988776632111344 355 4556776333221 1111 00 0 12
Q ss_pred EEEEeccCCC----CccCH-------HHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcE
Q 037063 251 VSSAEFAWPN----LRIHS-------GKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWH 314 (588)
Q Consensus 251 v~~v~~~~~~----~~i~~-------e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~ 314 (588)
+..+|..... ...+. +++++.+.. ....+++..|++.-+....|.+.| ++.| ++|+++|++
T Consensus 167 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~l 243 (445)
T PRK08593 167 FVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEK---YLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGIL 243 (445)
T ss_pred cEEeCCCccccccccCCcHHHHHHHHHHHHHHHHh---hcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 3344432110 00111 334444431 011256888999989888999988 8888 999999999
Q ss_pred EEEeCCCc-CCCC-----CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcc
Q 037063 315 VLLDATAL-GSKD-----MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEI 388 (588)
Q Consensus 315 vvvDaa~~-~~~d-----~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~ 388 (588)
+|+|.++. ++.. ...+++ .||++ ++-|.+|. ..-+|+++.++++++.+...... .+
T Consensus 244 lI~DEv~tg~GrtG~~~a~~~~gv---~pDi~--t~gK~l~~-G~p~gav~~~~~i~~~~~~~~~~--~T---------- 305 (445)
T PRK08593 244 FAVDDIQQGLGRTGKWSSISHFNI---TPDLM--SFGKSLAG-GMPMSAIVGRKEIMESLEAPAHL--FT---------- 305 (445)
T ss_pred EEEechhhCCCcCchHHHHHhcCC---CCCEe--eecccccC-CcccEEEEEcHHHHhhhccCCCC--CC----------
Confidence 99999963 3210 122332 38866 56896652 12389999999887766421111 00
Q ss_pred cccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCC
Q 037063 389 IELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKV 468 (588)
Q Consensus 389 ~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~ 468 (588)
..|.+ .+ .++..++|+.+++ +.+.++++.+.++|.+.|.++... .+.+.-+
T Consensus 306 ------------~~~~p--l~---~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~-----~~~v~~v---- 356 (445)
T PRK08593 306 ------------TGANP--VS---CAAALATIDMIED---ESLLQRSAEKGEYARKRFDQWVSK-----YNFVGDV---- 356 (445)
T ss_pred ------------CCCCH--HH---HHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhc-----CCcEEEE----
Confidence 01111 11 2445567777665 467788888888888888875211 1222110
Q ss_pred CCCcccEEEEEeecCCCCCc-C---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEE
Q 037063 469 MFDRGPSLAFNVFDWNGTRI-D---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTA 544 (588)
Q Consensus 469 ~~~rg~iv~f~~~~~~g~~i-~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRv 544 (588)
...|.++.+.+........ + ...+...+.++||.+... +...+|+
T Consensus 357 -rG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~------------------------------~~~~lr~ 405 (445)
T PRK08593 357 -RGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAV------------------------------AGNVLRF 405 (445)
T ss_pred -eccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEecc------------------------------CCCEEEE
Confidence 1245566665542111001 1 234556666789987431 1128999
Q ss_pred ecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 545 ALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 545 Slg~~~t~eDv~~li~~l~~~l~~ 568 (588)
++.+..|.+||+++++.+.+.+++
T Consensus 406 ~p~l~~t~~~id~~~~~l~~~l~~ 429 (445)
T PRK08593 406 QPPLVITYEQLDTALNTIEQAFTA 429 (445)
T ss_pred ECCCccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998865
No 336
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.26 E-value=4.6e-09 Score=114.52 Aligned_cols=353 Identities=14% Similarity=0.110 Sum_probs=195.7
Q ss_pred CCCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|..+.-|||..+. |--.+.+.+++.+.+.......+ + .. ..+..
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~----------------------~---~~-----~~~~~ 99 (451)
T PRK06918 50 DVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGF----------------------N---VM-----MYEPY 99 (451)
T ss_pred eCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccc----------------------c---cc-----ccHHH
Confidence 3368889997554 66677888888766643211100 0 00 12445
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHHh-----c--C---C
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSKK-----R--G---A 249 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~~-----~--G---~ 249 (588)
.++-+++++++..... ..|.|+.++|+|+..+++.-..-.|. +|+ ....||......+ .+... . + .
T Consensus 100 ~~la~~L~~~~p~~~~-~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~l-s~~~~~~~~~~~~~~~~~ 177 (451)
T PRK06918 100 IELAEKLAALAPGSFD-KKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTM-TMTSKVKPYKFGFGPFAP 177 (451)
T ss_pred HHHHHHHHHhCCCCCC-CEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhh-hhcCCCccccccCCCCCC
Confidence 5777778787753211 25999999999887666533211243 355 4556776333222 21110 0 1 1
Q ss_pred EEEEEeccC----CCCccC--------HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcC
Q 037063 250 RVSSAEFAW----PNLRIH--------SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKG 312 (588)
Q Consensus 250 ~v~~v~~~~----~~~~i~--------~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g 312 (588)
.+..+|... +.+ +. .+.+++.+.. ....++...|++.-++..-|.+.| +++| ++|+++|
T Consensus 178 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~g 253 (451)
T PRK06918 178 EVYKAPFPYEYRRPEG-LTEEQYDDFMIEEFKNFFIS---EVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHG 253 (451)
T ss_pred CcEEcCCCcccccccc-CchHHHHHHHHHHHHHHHHh---hcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 133333320 011 11 1223333320 011246777777777776787666 4446 8999999
Q ss_pred cEEEEeCCCcC-CCCCCCCCCC--CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccc
Q 037063 313 WHVLLDATALG-SKDMDTLGLS--LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEII 389 (588)
Q Consensus 313 ~~vvvDaa~~~-~~d~~~l~l~--~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~ 389 (588)
+++|+|.++.. +..-..+... ...+| +.++.|.++. ...+|++++++++++.+.+...+
T Consensus 254 illI~DEV~tg~gr~g~~~a~~~~~v~pD--i~t~sK~l~~-G~pig~v~~~~~i~~~~~~~~~~--------------- 315 (451)
T PRK06918 254 ILFVADEIQTGFARTGKYFAIEHFDVVPD--LITVSKSLGA-GVPISGVIGRKEIMDESAPGELG--------------- 315 (451)
T ss_pred CEEEEeccccCcCccCceehhHhcCCCCC--EEeeehhhcC-CCccEEEEEcHHHHhccCCCCcC---------------
Confidence 99999998542 2111111111 12378 4478997763 45689999998887766432221
Q ss_pred ccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCC
Q 037063 390 ELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVM 469 (588)
Q Consensus 390 ~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~ 469 (588)
+|..-..+ ..++..++|+.+.+ +.+.++++.+.+++.++|+++... .+.+.-+
T Consensus 316 -------------~T~~g~~l-~~aaa~a~l~~i~~---~~~~~~~~~~g~~l~~~l~~l~~~-----~~~~~~v----- 368 (451)
T PRK06918 316 -------------GTYAGSPL-GCAAALAVLDIIEK---ENLNDRAIELGKVVMNRFEEMKNK-----YNCIGDV----- 368 (451)
T ss_pred -------------cCCCcCHH-HHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHhh-----CCCceee-----
Confidence 01111111 01333456666654 456777888888888888776211 1211111
Q ss_pred CCcccEEEEEeecCCCCCc-C---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEe
Q 037063 470 FDRGPSLAFNVFDWNGTRI-D---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAA 545 (588)
Q Consensus 470 ~~rg~iv~f~~~~~~g~~i-~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvS 545 (588)
...|.++.+.+........ + ...+.+.+.++||.+.++.. .+ .+||++
T Consensus 369 rg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~---------------------------~~-~~lrl~ 420 (451)
T PRK06918 369 RGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGT---------------------------YG-NVIRVL 420 (451)
T ss_pred ccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCC---------------------------CC-CEEEEE
Confidence 1246666665531111111 1 23455556789999876411 11 289999
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 546 LGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 546 lg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
+.+..+.+||+.+++.|.++++..
T Consensus 421 p~l~~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 421 MPLVITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred CCCccCHHHHHHHHHHHHHHHHHH
Confidence 988789999999999999999764
No 337
>PRK07036 hypothetical protein; Provisional
Probab=99.26 E-value=1e-08 Score=111.88 Aligned_cols=360 Identities=11% Similarity=0.095 Sum_probs=203.4
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+. |.-.+.+.+++.+.+....+..+ . +....+...
T Consensus 48 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~-----------------------~------~~~~~~~~~ 98 (466)
T PRK07036 48 ADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTP-----------------------F------GDMTNAPAA 98 (466)
T ss_pred CCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCccccc-----------------------c------cccCCHHHH
Confidence 368889998655 66677888887666533111100 0 000134445
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----CCCC-eEE-EcCCCchhHHHHHHHHHHh----c---
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----YSNP-RLL-TVYDHENEAAALMIESSKK----R--- 247 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~~gd-~ll-~~~e~~s~~~~~~~~~a~~----~--- 247 (588)
++-+++.+.+...- ..|.|+.++|+|+..+++... + +++. +|+ ....||...... ...... .
T Consensus 99 ~lae~L~~~~p~~~--~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a-~s~~~~~~~~~~~~ 175 (466)
T PRK07036 99 ELAAKLAELAPGDL--NHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLT-ASLTGKAADRTEFD 175 (466)
T ss_pred HHHHHHHHhCCCCc--CEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhh-hcccCCCccccccc
Confidence 67777777754322 359999999998876665321 1 1223 455 455566533211 111000 0
Q ss_pred --CCEEEEEeccCCC---CccC--------HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHH
Q 037063 248 --GARVSSAEFAWPN---LRIH--------SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAA 309 (588)
Q Consensus 248 --G~~v~~v~~~~~~---~~i~--------~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~ 309 (588)
...+..++..... ..+. .+.+++.|. ....++...|++.-+....|.+.| ++.| ++|+
T Consensus 176 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~----~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~ 251 (466)
T PRK07036 176 YASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKIL----SLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICR 251 (466)
T ss_pred CCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHH----HcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHH
Confidence 0123344332100 0111 234555554 112356888889888888899988 7888 9999
Q ss_pred HcCcEEEEeCCCc-CCCC-----CC-CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeee
Q 037063 310 EKGWHVLLDATAL-GSKD-----MD-TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIE 382 (588)
Q Consensus 310 ~~g~~vvvDaa~~-~~~d-----~~-~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~ 382 (588)
++|+++|+|.++. ++.. .. .++ ..||++++ -|.+|.+=.-+|++++++++.+.+.+.... +.
T Consensus 252 ~~g~llI~DEV~tGfGRtG~~~~~~~~~g---v~PDivt~--gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~--~~---- 320 (466)
T PRK07036 252 RYDILYISDEVVTGFGRLGHFFASEAVFG---IQPDIITF--AKGLTSGYQPLGAVIISERLLDVISGPNAK--GN---- 320 (466)
T ss_pred HcCCEEEEeechhCCCcCchhhhhhhhcC---CCCCEEEE--ccccccCccccEEEEEcHHHHHHHhcccCc--Cc----
Confidence 9999999999964 3310 11 223 24898755 796662101279999999987766432100 00
Q ss_pred cCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-
Q 037063 383 PSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV- 461 (588)
Q Consensus 383 ~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v- 461 (588)
.|...+|..-..+ .+++..+.|+.+++ +++.++++.+.++|.+.|..+. . .+.+
T Consensus 321 ---------------~~~~~~T~~gnpl-~~aaa~a~Le~i~~---~~l~~~~~~~g~~l~~~L~~l~-~-----~~~v~ 375 (466)
T PRK07036 321 ---------------VFTHGFTYSGHPV-ACAAALKNIEIMER---EGLCEHVREVGPYFEERLASLR-E-----LPLVG 375 (466)
T ss_pred ---------------ccccCCCCCCCHH-HHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhc-c-----CCCEE
Confidence 0001112222221 12444456666654 4677888888888888887752 1 1222
Q ss_pred EEeCCCCCCCcccEEEEEeecCCC--CCcC-----HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCC
Q 037063 462 RIYGPKVMFDRGPSLAFNVFDWNG--TRID-----PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNE 534 (588)
Q Consensus 462 ~i~~p~~~~~rg~iv~f~~~~~~g--~~i~-----~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~ 534 (588)
.+- ..|.++.+.+.+..+ +... ...+.+.+.++||.++..
T Consensus 376 ~vr------G~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~--------------------------- 422 (466)
T PRK07036 376 DVR------GDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPL--------------------------- 422 (466)
T ss_pred EEE------eeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeec---------------------------
Confidence 121 346677777643221 1111 234566677789987531
Q ss_pred CcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh---hccccccc
Q 037063 535 TRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD---FVEKERWR 577 (588)
Q Consensus 535 ~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~---~~~~~~~~ 577 (588)
| ..+|+++.+..|.+||+++++.+.+.|++. ...+..||
T Consensus 423 ---~-~~~~l~Ppl~it~~~id~~~~~l~~al~~~~~~~~~~~~~~ 464 (466)
T PRK07036 423 ---E-HLCVLSPPLIITRAQIDEIVAILRAAIEETADELAAHGLWR 464 (466)
T ss_pred ---C-CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHhccccC
Confidence 1 178999999999999999999998877653 22345676
No 338
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.25 E-value=3.6e-09 Score=114.47 Aligned_cols=338 Identities=12% Similarity=0.069 Sum_probs=195.8
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+.-|||..+. |.-++.+.+++.+.+.... .. . . ..+...+
T Consensus 48 dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~--~~---------------------~--~--------~~~~~~~ 94 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL--SF---------------------G--A--------PTELEVE 94 (426)
T ss_pred CCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC--cC---------------------C--C--------CCHHHHH
Confidence 67789998653 4667788888876664311 00 0 0 0234457
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEE-EcCCCchhHHHHHHHHHHh----------cCCEE
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLL-TVYDHENEAAALMIESSKK----------RGARV 251 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll-~~~e~~s~~~~~~~~~a~~----------~G~~v 251 (588)
+.+++++.+. ..+ .|.|+.++++|+..++.... +..+++|+ ....||... .+....... .+...
T Consensus 95 la~~L~~~~~-~~~--~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t-~~~~~~~~~~~~~~~~~~~~~~~~ 170 (426)
T PRK00062 95 LAELVIELVP-SIE--MVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHA-DSLLVKAGSGAATLGLPDSPGVPE 170 (426)
T ss_pred HHHHHHHhCC-CCC--EEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCch-hhhhhccCccccccCCCCCCCCCc
Confidence 8888887763 122 49999999999988877531 22244555 555676522 111111000 01100
Q ss_pred ----EEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCc
Q 037063 252 ----SSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATAL 322 (588)
Q Consensus 252 ----~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~ 322 (588)
..+.+. .-|.+++++.+.. ..+++.+|++..+...+|.+.| +++| ++|+++|+++|+|.++.
T Consensus 171 ~~~~~~~~~~----~~d~~~l~~~i~~-----~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~ 241 (426)
T PRK00062 171 DFAKHTLTAP----YNDLEAVEELFEE-----YGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT 241 (426)
T ss_pred ccccceEEcC----CCCHHHHHHHHHh-----CCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh
Confidence 011111 1267888888861 1246888899888888999999 8888 99999999999999975
Q ss_pred CCCCCCCCC---CCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccccccc
Q 037063 323 GSKDMDTLG---LSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQ 399 (588)
Q Consensus 323 ~~~d~~~l~---l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f 399 (588)
.- ...... .-...+|+ .++.|.+|. ...+|++++++++++.+...... .
T Consensus 242 G~-r~g~~~~~~~~~~~pDi--~~~gK~l~~-G~p~ga~~~~~~i~~~~~~~~~~--~---------------------- 293 (426)
T PRK00062 242 GF-RVALGGAQGYYGVTPDL--TTLGKIIGG-GLPVGAFGGRREIMEQLAPLGPV--Y---------------------- 293 (426)
T ss_pred cc-ccCCccHHHHhCCCcch--HhhhhHhhC-CCcceeeeEHHHHHHhhccCCCc--e----------------------
Confidence 21 111111 01123785 567796662 22378888888887766421100 0
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEE
Q 037063 400 SKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFN 479 (588)
Q Consensus 400 ~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~ 479 (588)
...|...... ..++..++|+.+.+ +.+.++++.+.+++++.|.++.... +.. +.+- ..|.++.+.
T Consensus 294 -~~~T~~~~p~-~~aaa~a~L~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~---~~~-~~vr------g~G~~~~i~ 358 (426)
T PRK00062 294 -QAGTLSGNPL-AMAAGLATLKLLKE---PGFYEELEALTKRLAEGLKEAAKKA---GIP-LTVN------RVGSMFGLF 358 (426)
T ss_pred -ecccCcCCHH-HHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHHHc---CCc-eEEE------EecceEEEE
Confidence 0011111111 12444566766654 3567777777788877777541110 111 1111 246788877
Q ss_pred eecCCCCCc------C---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCC
Q 037063 480 VFDWNGTRI------D---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLT 550 (588)
Q Consensus 480 ~~~~~g~~i------~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~ 550 (588)
+.+.....+ + ...+...+.++||.+.+. +.+.++++ ...
T Consensus 359 l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~------------------------------~~~~~~~~--~~~ 406 (426)
T PRK00062 359 FTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPS------------------------------QFEAGFVS--AAH 406 (426)
T ss_pred EecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecC------------------------------CcCceeee--ccC
Confidence 754221100 1 135667777889987542 11256665 577
Q ss_pred CHHHHHHHHHHHHHhhhh
Q 037063 551 NFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 551 t~eDv~~li~~l~~~l~~ 568 (588)
|.+||+++++.|++.+++
T Consensus 407 t~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 407 TDEDIEKTLEAARKAFAA 424 (426)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999988764
No 339
>PRK07482 hypothetical protein; Provisional
Probab=99.24 E-value=1.2e-08 Score=111.28 Aligned_cols=355 Identities=13% Similarity=0.062 Sum_probs=200.8
Q ss_pred CCCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|..+..|+|..+. |--.+.+.+++.+.+....+..+ .. ....+..
T Consensus 46 D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~-----------------------~~------~~~~~~~ 96 (461)
T PRK07482 46 DAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHT-----------------------YV------GHGTEAS 96 (461)
T ss_pred ECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCcccc-----------------------cc------ccCCHHH
Confidence 3368899998866 56677888888766643111100 00 0013445
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----CCCC-eEE-EcCCCchhHHHHHHHHH------Hhc
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----YSNP-RLL-TVYDHENEAAALMIESS------KKR 247 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~~gd-~ll-~~~e~~s~~~~~~~~~a------~~~ 247 (588)
.++-++|++.+..+- ..|.|+.++|+|+..+++... + .++. +|+ ....||......+ .+. ...
T Consensus 97 ~~lAe~L~~~~p~~~--~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~-s~~~~~~~~~~~ 173 (461)
T PRK07482 97 ITLSKRIIDRAPAGM--SKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTG-SLTGLSLFHQHF 173 (461)
T ss_pred HHHHHHHHHhCCCCc--CEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhh-hccCCchhhhcc
Confidence 577777777764322 359999999999887766431 0 1233 365 4556665332211 110 011
Q ss_pred C---CEEEEEeccCC-C----C-------ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HH
Q 037063 248 G---ARVSSAEFAWP-N----L-------RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SV 307 (588)
Q Consensus 248 G---~~v~~v~~~~~-~----~-------~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~ 307 (588)
+ ..+..++.... . + .-+.+.+++.+. +...++...|++.-+....|.+.| ++.| ++
T Consensus 174 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~l 249 (461)
T PRK07482 174 DLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELIL----AEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAV 249 (461)
T ss_pred CCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHH----hcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 1 11233332100 0 0 013466777774 112246788888878777788865 3346 89
Q ss_pred HHHcCcEEEEeCCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEee
Q 037063 308 AAEKGWHVLLDATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGI 381 (588)
Q Consensus 308 a~~~g~~vvvDaa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~ 381 (588)
|+++|+++|+|.++.. +. -...+| ..||++++ -|.+|.+-.-+|++++++++.+.+....... +.
T Consensus 250 c~~~giLlI~DEV~tGfGRtG~~~a~~~~g---v~PDiv~~--gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~-~~--- 320 (461)
T PRK07482 250 LKKYDILLIADEVVTGFGRLGSMFGSDHYG---IEPDLITV--AKGLTSAYAPLSGSIVGEKVWDVLEQGSDEH-GA--- 320 (461)
T ss_pred HHHhCCEEEEeccccCCCcCcchhhHHhcC---CCCCEEEE--ccccccCccccceeeecHHHHHHHhcccccC-Cc---
Confidence 9999999999998653 21 112233 34999885 6966521013688889988766554211000 00
Q ss_pred ecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE
Q 037063 382 EPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV 461 (588)
Q Consensus 382 ~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v 461 (588)
+.-.+|..-..+ ..++..+.|+.+++ +.+.++.+.+.++|.+.|.++.-. .+.+
T Consensus 321 -----------------~~h~~T~~gnpl-~~Aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~-----~~~v 374 (461)
T PRK07482 321 -----------------IGHGWTYSGHPI-CAAAALANLDILER---ENLVGNAAEVGAYFRARLRAAFGD-----HPLV 374 (461)
T ss_pred -----------------cccCCCCCcCHH-HHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhc-----CCCE
Confidence 001222222222 12444456666655 557788888888888888765211 1222
Q ss_pred -EEeCCCCCCCcccEEEEEeecCC--CCCcC-----HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCC
Q 037063 462 -RIYGPKVMFDRGPSLAFNVFDWN--GTRID-----PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTN 533 (588)
Q Consensus 462 -~i~~p~~~~~rg~iv~f~~~~~~--g~~i~-----~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~ 533 (588)
.+- .+|.++.+.+.... .+..+ ...+...+.++||.++.+.
T Consensus 375 ~~vr------G~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~------------------------- 423 (461)
T PRK07482 375 GEVR------GVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMP------------------------- 423 (461)
T ss_pred EEEe------eceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCC-------------------------
Confidence 221 34667777764311 11111 1345666677899875420
Q ss_pred CCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 534 ETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 534 ~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.+ .+||+.+.+..|.+||+++++.+.+.|+.
T Consensus 424 ---~~-~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 424 ---HG-DILGFAPPLVLTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred ---CC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 01 28999999999999999999999998875
No 340
>PRK06105 aminotransferase; Provisional
Probab=99.24 E-value=1.3e-08 Score=111.13 Aligned_cols=350 Identities=12% Similarity=0.083 Sum_probs=203.3
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+. |--.+.+++++.+.+....+.+. .+. ...+...
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~------------------------~~~-----~~~~~~~ 95 (460)
T PRK06105 45 DAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHT------------------------FSH-----KSHGPVI 95 (460)
T ss_pred CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeec------------------------ccc-----cCCHHHH
Confidence 368899998654 45577888888766643111000 000 0134445
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC------CCCCC-eEE-EcCCCchhHHHHHHHHHH------hcC
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP------FYSNP-RLL-TVYDHENEAAALMIESSK------KRG 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~------~~~gd-~ll-~~~e~~s~~~~~~~~~a~------~~G 248 (588)
++-++|++++..+- ..|.|+.++++|+..+++... -.++. +|+ ....||......+ .+.. ..|
T Consensus 96 ~lae~L~~~~p~~~--~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~-s~t~~~~~~~~~~ 172 (460)
T PRK06105 96 DLAEKLVAMAPVPM--SKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASA-SLTGLPNNHRSFD 172 (460)
T ss_pred HHHHHHHHhCCCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhhe-eccCCcccccccC
Confidence 77788888774321 259999999999887776521 01233 355 4566665332211 1100 011
Q ss_pred ---CEEEEEeccCCCCc-------------cCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HH
Q 037063 249 ---ARVSSAEFAWPNLR-------------IHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SV 307 (588)
Q Consensus 249 ---~~v~~v~~~~~~~~-------------i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~ 307 (588)
..+..++.. ...+ ...+++++++.. ...++...|++.-+...-|...| ++.+ ++
T Consensus 173 ~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~le~~~~~----~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~l 247 (460)
T PRK06105 173 LPLDRILHTGCP-HYYRFGLPGESEEAFATRLANELEALILA----EGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAV 247 (460)
T ss_pred CCCCCCEEcCCC-cccccccCCCChHHHHHHHHHHHHHHHHH----cCCCceEEEEEccccCCCCCccCCHHHHHHHHHH
Confidence 112233321 0000 013567777641 11246788888888888899988 7788 99
Q ss_pred HHHcCcEEEEeCCCc-CCCC-----CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEee
Q 037063 308 AAEKGWHVLLDATAL-GSKD-----MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGI 381 (588)
Q Consensus 308 a~~~g~~vvvDaa~~-~~~d-----~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~ 381 (588)
|+++|+++|+|.++. ++.. ...++ ..||+++ +-|-+|.+-.-+|++++++++.+.+.+..... +.
T Consensus 248 c~~~~~llI~DEv~tG~GRtG~~f~~~~~~---v~PDi~~--~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~-~~--- 318 (460)
T PRK06105 248 LRKYDILLVADEVICGFGRTGNMFGCETFG---IKPDILV--MSKQLSSSYQPLSAVLMNEKVYDPIADESGKI-GT--- 318 (460)
T ss_pred HHHcCCeEEEeccccCCCcCchhhhHHhcC---CCCCeee--eecccccCcccceEEEEcHHHHHHHhcccccC-cc---
Confidence 999999999999973 3311 12223 3499764 57966521012789999988876654321000 00
Q ss_pred ecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE
Q 037063 382 EPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV 461 (588)
Q Consensus 382 ~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v 461 (588)
|.-.+|.+-..+ ..++..++|+.+++ +.+.++++.+.++|.++|.+| ..+ +.+
T Consensus 319 -----------------~~h~~T~~gnpl-~~aaa~a~L~~i~~---~~l~~~v~~~g~~l~~~L~~l-~~~-----~~v 371 (460)
T PRK06105 319 -----------------FGHGFTASGHPV-AAAVALENLAIIEE---RDLVGNAAERGARLQARLRAL-ADH-----PLV 371 (460)
T ss_pred -----------------cccCCCCCCCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHh-hcC-----CCe
Confidence 001122222222 12344466777765 467888899999999999887 221 222
Q ss_pred -EEeCCCCCCCcccEEEEEeecCCC--CCcC-----HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCC
Q 037063 462 -RIYGPKVMFDRGPSLAFNVFDWNG--TRID-----PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTN 533 (588)
Q Consensus 462 -~i~~p~~~~~rg~iv~f~~~~~~g--~~i~-----~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~ 533 (588)
.+- .+|.++.+.+....+ +..+ ...+.+.+.++||.++..
T Consensus 372 ~~vr------G~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~-------------------------- 419 (460)
T PRK06105 372 GEVR------GVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAM-------------------------- 419 (460)
T ss_pred EEEE------ecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEec--------------------------
Confidence 121 346677777643221 1111 134566667889987541
Q ss_pred CCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 534 ETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 534 ~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
. .+||+++.+..|.+||+++++.+.+.|++
T Consensus 420 ---g--~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 449 (460)
T PRK06105 420 ---G--DTLAFCPPLIITAAQVDEMVDRFGRALDD 449 (460)
T ss_pred ---C--CEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 1 18999999989999999999999998865
No 341
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.23 E-value=4.8e-09 Score=113.30 Aligned_cols=343 Identities=12% Similarity=0.088 Sum_probs=193.7
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
++..|+|..+. |.-.+.+.+++.+.+.... . + . . ..+...+
T Consensus 51 dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~--------------~------~-~---------~~~~~~~ 97 (433)
T PRK00615 51 LGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT---S--------------Y------G-L---------TSEQEIL 97 (433)
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCC---C--------------C------C-C---------CCHHHHH
Confidence 67889998654 5567788888766653210 0 0 0 0 0234456
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCe-EE-EcCCCchhHHHH-HHHHHHhcCCE---EEE-Eec
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPR-LL-TVYDHENEAAAL-MIESSKKRGAR---VSS-AEF 256 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~-ll-~~~e~~s~~~~~-~~~~a~~~G~~---v~~-v~~ 256 (588)
+-+++.+.+.... ..|.|+.++|+|+..+++....-.|.. |+ ....||.. ..| +... ...+.. ... ...
T Consensus 98 la~~L~~~~~~~~--~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~-td~~~~~~-~~~~~~~~~~~~~~~~ 173 (433)
T PRK00615 98 FAEELFSYLGLED--HKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGH-ADTLLQGI-SFSETSLDTLTHLVDT 173 (433)
T ss_pred HHHHHHHhCCCCc--CEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCC-CcccCccc-ccCCCCcCcCCCCCCC
Confidence 6777777775321 359999999998887666432223543 55 44456641 111 1011 000100 000 000
Q ss_pred cC--CC----CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHH----HH-HHHHHcCcEEEEeCCCcC--
Q 037063 257 AW--PN----LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYM----WM-SVAAEKGWHVLLDATALG-- 323 (588)
Q Consensus 257 ~~--~~----~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~----~I-~~a~~~g~~vvvDaa~~~-- 323 (588)
.. +. ..-|.+++++.+.+ . .++...|++..+....|.+.|.. .| ++|+++|+++|+|.++..
T Consensus 174 ~~~~~~~~~~~~~d~~~l~~~l~~----~-~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R 248 (433)
T PRK00615 174 DLAHPLTLSLPYNDFQIFQTVMNS----L-GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFR 248 (433)
T ss_pred CCCCCCeEeCCCCCHHHHHHHHHh----c-CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 00 00 01157888888862 1 14678899998988899999855 78 999999999999999742
Q ss_pred -CC--CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccc
Q 037063 324 -SK--DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS 400 (588)
Q Consensus 324 -~~--d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~ 400 (588)
+. -...++ ..||+++ +-|.+|. ..-+|++++++++++.+.+. + . .|
T Consensus 249 ~G~~ga~~~~g---v~PDi~~--~gK~lgg-G~p~~av~~~~~i~~~~~~~--~---~-------------------~~- 297 (433)
T PRK00615 249 VAQGGAAAIYH---VKPDITV--YGKILGG-GLPAAAVVAHKSIMDHLAPE--G---T-------------------IF- 297 (433)
T ss_pred ccHhHHHHhcC---CCCCeEE--EcccccC-CcceeeeeecHHHHhhhcCC--C---C-------------------cc-
Confidence 10 011223 2489875 6897762 12278999999987766431 1 0 00
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEe
Q 037063 401 KFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNV 480 (588)
Q Consensus 401 e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~ 480 (588)
-.+|.....+ ..++..+.|+.+++ +.+.++++++.++|.++|+++.... |.+ +.... .|.++.+.+
T Consensus 298 ~~~T~~g~p~-~~aa~la~L~~i~~---~~~~~~~~~~g~~l~~~l~~~~~~~---g~~-v~~~r------~G~~~~i~~ 363 (433)
T PRK00615 298 QAGTLSGNPL-AMAAGKASINLCRE---QGFYTQLSTLEQNFLSPIEEMIRSQ---GFP-VSLVR------YGSMFSFFF 363 (433)
T ss_pred cCCCCcccHH-HHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHHc---CCC-eEEEe------eceEEEEEE
Confidence 1122211111 12455566666654 4467777777777777766541111 233 33321 356777766
Q ss_pred ecCCCCCc------C---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCC
Q 037063 481 FDWNGTRI------D---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTN 551 (588)
Q Consensus 481 ~~~~g~~i------~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t 551 (588)
.+..-..+ + ...+.+.+.++||.+..+.. + . ..+....|
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----------------------------~--~--~~ls~~ht 411 (433)
T PRK00615 364 NENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPF----------------------------E--A--SFLSSAHS 411 (433)
T ss_pred eCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCccc----------------------------c--c--cceecCCC
Confidence 53210000 1 12456666778988754311 1 1 12335569
Q ss_pred HHHHHHHHHHHHHhhhhhhc
Q 037063 552 FEDTYRLWAFVSRFLDADFV 571 (588)
Q Consensus 552 ~eDv~~li~~l~~~l~~~~~ 571 (588)
.+||+++++++.+++++.|.
T Consensus 412 ~~did~~~~a~~~~~~~~~~ 431 (433)
T PRK00615 412 MENLDYAQNVLIDSLEKVFS 431 (433)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999988763
No 342
>PRK07480 putative aminotransferase; Validated
Probab=99.23 E-value=1.1e-08 Score=111.27 Aligned_cols=349 Identities=12% Similarity=0.051 Sum_probs=195.3
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+. |.-.+.+.+++.+.+..-...+. .. . ...+...
T Consensus 47 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~-----------------------~~-~-----~~~~~~~ 97 (456)
T PRK07480 47 SEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNT-----------------------FF-K-----TTHPPAI 97 (456)
T ss_pred CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc-----------------------cc-c-----cCCHHHH
Confidence 367889998654 66677888887666643111000 00 0 0134556
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----CCCC-eEE-EcCCCchhHHHHHH-----HHHHhcCC
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----YSNP-RLL-TVYDHENEAAALMI-----ESSKKRGA 249 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~~gd-~ll-~~~e~~s~~~~~~~-----~~a~~~G~ 249 (588)
++-++|++++...- ..|.|+.++|+|+..+++... + ++|. +|+ ....||......+. ...+..|.
T Consensus 98 ~lae~L~~~~p~~~--~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~ 175 (456)
T PRK07480 98 ELAAKLAEVAPPGF--NHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDL 175 (456)
T ss_pred HHHHHHHHhCCCCc--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCC
Confidence 77888888875322 259999999998877665321 1 1333 355 44556653322111 00000111
Q ss_pred ---EEEEEeccCCCC---ccC--------HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHH
Q 037063 250 ---RVSSAEFAWPNL---RIH--------SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAE 310 (588)
Q Consensus 250 ---~v~~v~~~~~~~---~i~--------~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~ 310 (588)
.+..++...... ..+ .+.+++.+. ....++...|++.-+...-|.+.| ++.| ++|++
T Consensus 176 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~ 251 (456)
T PRK07480 176 PIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKIL----ELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRK 251 (456)
T ss_pred CCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHH----hcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 122232210000 001 245555553 112256788888888888899888 7778 99999
Q ss_pred cCcEEEEeCCCc-CCC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecC
Q 037063 311 KGWHVLLDATAL-GSK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPS 384 (588)
Q Consensus 311 ~g~~vvvDaa~~-~~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~ 384 (588)
+|+++|+|.++. ++. -...+| ..||+++ +-|-+|.+-.-+|++++++++.+.+.... + .
T Consensus 252 ~g~llI~DEV~tGfGRtG~~~a~~~~g---v~PDiv~--~gK~l~gG~~Pi~av~~~~~i~~~~~~~~-~---~------ 316 (456)
T PRK07480 252 YDILLVADEVICGFGRTGEWFGSQHFG---IKPDLMT--IAKGLTSGYIPMGAVGVGDRVAEVLIEEG-G---E------ 316 (456)
T ss_pred cCCEEEEechhhCCCcCcchhhhhhcC---CCCCeee--eehhhccCCccceEEEEcHHHHHHHhcCC-C---C------
Confidence 999999999964 321 112233 3489765 47966521012799999988876652100 1 0
Q ss_pred CCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHH-HHHHHHHHHHHHcccCCCCCCCCCeE-E
Q 037063 385 FSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRA-RYLINWLANALMNLHHPHSETGIPLV-R 462 (588)
Q Consensus 385 ~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~-~~L~~~l~~~L~~L~h~~~~~g~~~v-~ 462 (588)
|.-.+|..-..+ ..++..++|+.+++ +.+.+++ +.+.++|.+.|+++. . .+.+ .
T Consensus 317 --------------~~~~~T~~gnpl-~~Aaa~a~L~~l~~---~~l~~~~~~~~g~~l~~~l~~l~-~-----~~~i~~ 372 (456)
T PRK07480 317 --------------FNHGFTYSGHPV-AAAVALANLRILRD---EGIVERVRDDTGPYLQKRLRELA-D-----HPLVGE 372 (456)
T ss_pred --------------cccCCCCCcCHH-HHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhh-c-----CCCeee
Confidence 000111111111 12455567777665 3466677 477777777777652 0 1211 1
Q ss_pred EeCCCCCCCcccEEEEEeecCCC--CCc-C----HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCC
Q 037063 463 IYGPKVMFDRGPSLAFNVFDWNG--TRI-D----PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNET 535 (588)
Q Consensus 463 i~~p~~~~~rg~iv~f~~~~~~g--~~i-~----~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~ 535 (588)
+- ..|.++.+.+.+... +.. . ...+...+.++||.+...
T Consensus 373 vr------G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---------------------------- 418 (456)
T PRK07480 373 VR------GVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV---------------------------- 418 (456)
T ss_pred EE------eecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec----------------------------
Confidence 11 246677777643211 111 1 134555667789987531
Q ss_pred cCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 536 RSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 536 ~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
. ..+|+++.+..|.+||+++++.|.+.|++
T Consensus 419 -~--~~l~~~Ppl~it~~eid~~~~~l~~al~~ 448 (456)
T PRK07480 419 -G--DRMIISPPLVITHAEIDELVEKARKALDA 448 (456)
T ss_pred -C--CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1 17999999999999999999999998875
No 343
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.22 E-value=1.1e-08 Score=111.41 Aligned_cols=340 Identities=12% Similarity=0.120 Sum_probs=194.7
Q ss_pred CCeeeecCCC-----CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHH
Q 037063 110 NNYVCFDYIG-----HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKI 184 (588)
Q Consensus 110 ~~~vyLD~a~-----~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~ 184 (588)
.+.-|||.++ .|.-.+.+++++.+.+....... +.. ..+...++
T Consensus 70 dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~--------------------------~~~-----~~~~~~~l 118 (459)
T PRK06082 70 DGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSP--------------------------RRF-----TNETAIEC 118 (459)
T ss_pred CCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCcc--------------------------Ccc-----CCHHHHHH
Confidence 6788999875 35567788888876664311100 000 13455678
Q ss_pred HHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEE-EcCCCchhHHHHHHHHHHh----c--C---CEEEE
Q 037063 185 RKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLL-TVYDHENEAAALMIESSKK----R--G---ARVSS 253 (588)
Q Consensus 185 r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll-~~~e~~s~~~~~~~~~a~~----~--G---~~v~~ 253 (588)
.+++++++.... ..+.|++++++|+..++.... +....+|+ ....||......+ .+... . + ..+..
T Consensus 119 ae~L~~~~p~~~--~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~-s~~~~~~~~~~~~~~~~~~~~ 195 (459)
T PRK06082 119 AEKLTEIAGGEL--NRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAI-SVGGEACFRQGMGPLMAGVER 195 (459)
T ss_pred HHHHHHhCCCCC--CEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHH-hhcCCcccccCCCCCCCCCEE
Confidence 888888875322 259999999998887665321 22224555 4555665333222 11100 0 0 11233
Q ss_pred EeccCCCCc-----cC------HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEe
Q 037063 254 AEFAWPNLR-----IH------SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLD 318 (588)
Q Consensus 254 v~~~~~~~~-----i~------~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvD 318 (588)
+|.. ...+ .+ .+.+++.|.+ .++...|++.-+.+.-+...| +++| ++|+++|+++|+|
T Consensus 196 ~~~~-~~~~~~~~~~~~~~~~~~~~l~~~i~~------~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~D 268 (459)
T PRK06082 196 IPPA-VSYRGAFPDADGSDVHYADYLEYVIEK------EGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIID 268 (459)
T ss_pred eCCC-cccccccCChhHHHHHHHHHHHHHHhc------CCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 3321 0000 11 2446666651 135778888777766444556 6778 9999999999999
Q ss_pred CCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccc
Q 037063 319 ATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELE 392 (588)
Q Consensus 319 aa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~ 392 (588)
.++.. +. -...+++ .||+++ +-|.+|.+-.-+|++++++++........ .
T Consensus 269 EV~tG~GRtG~~fa~e~~gv---~PDiv~--~gKgl~gG~~P~~av~~~~~i~~~~~~~~-~------------------ 324 (459)
T PRK06082 269 EIPNGMGRTGEWFTHQAYGI---EPDILC--IGKGLGGGLVPIAAMITKDKYNTAAQISL-G------------------ 324 (459)
T ss_pred chhhCCCccchhhHhHhhCC---CCCEEE--ecccccCCCCcceEEEEcHHHHhhccCCC-C------------------
Confidence 99653 21 0122333 499887 68966621012688888887643221100 0
Q ss_pred cccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCCCC
Q 037063 393 TLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVMFD 471 (588)
Q Consensus 393 ~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~~~ 471 (588)
. +|..-..+ ..++..+.|+.+.+ +.+.++++.+.++|.++|.++.-. .+.+ .+- .
T Consensus 325 --------~-~T~~gnpl-~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~-----~~~i~~vr------G 380 (459)
T PRK06082 325 --------H-YTHEKSPL-GCAAALATIEVIEQ---EGLLEKVKADSQFMRERLLEMKAK-----YPLIGDVR------G 380 (459)
T ss_pred --------C-CCCCcCHH-HHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhh-----CCCeeeee------e
Confidence 0 11111111 12444466666655 457788888999999988876311 1211 111 3
Q ss_pred cccEEEEEeecCCCCC-cC---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecC
Q 037063 472 RGPSLAFNVFDWNGTR-ID---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALG 547 (588)
Q Consensus 472 rg~iv~f~~~~~~g~~-i~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg 547 (588)
+|.++.+.+....... -+ ...+...+.++||.++.. +..+||+++.
T Consensus 381 ~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~------------------------------~~~~i~~~Pp 430 (459)
T PRK06082 381 IGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVS------------------------------QGNVIQLSPP 430 (459)
T ss_pred ccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEec------------------------------CCCEEEEeCC
Confidence 4677777775321110 01 234555566789987531 1128999999
Q ss_pred CCCCHHHHHHHHHHHHHhhhh
Q 037063 548 CLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 548 ~~~t~eDv~~li~~l~~~l~~ 568 (588)
+..|.+||+++++.+.+.+.+
T Consensus 431 l~it~~eid~~~~~l~~~l~~ 451 (459)
T PRK06082 431 LIITREELTQALAILEEAIAK 451 (459)
T ss_pred CccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999998865
No 344
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.20 E-value=8.3e-10 Score=114.04 Aligned_cols=211 Identities=16% Similarity=0.157 Sum_probs=142.3
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
.+.|-.-+-|-+++++..++++..-+... ..+.| ...+....++.+....
T Consensus 26 ~G~v~~t~lG~s~~~~e~iea~~~~~~~~-------------------v~Le~-----------~l~~g~~~~R~~~~~~ 75 (395)
T COG1921 26 IGTVLMTNLGRSLYSPEAIEAMKEAMRAP-------------------VELET-----------DLKTGKRGARLTELAE 75 (395)
T ss_pred hhhheeccCCCccCCHHHHHHHHHHhccc-------------------ceeee-----------ecccchhhHHHHHHHH
Confidence 34455566788899999999875443211 11100 0112334445554444
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcC-----CCchhHHHHHHHHHHhcCCEEEEEeccCCCCccC
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVY-----DHENEAAALMIESSKKRGARVSSAEFAWPNLRIH 264 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~-----e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~ 264 (588)
.+.++... +.++.++|.+.|+-++..++ -+ +.+++..+ +++. .+ ...++..|++++.+.- ..+.+
T Consensus 76 ~~~~~~~a-ea~~ivnnn~aAVll~~~al-~~-~~EvVis~g~lV~gg~~-~v---~d~~~~aG~~l~EvG~---tn~t~ 145 (395)
T COG1921 76 LLCGLTGA-EAAAIVNNNAAAVLLTLNAL-AE-GKEVVVSRGELVEGGAF-RV---PDIIRLAGAKLVEVGT---TNRTH 145 (395)
T ss_pred HHhcccch-hheeeECCcHHHHHHHHhhh-cc-CCeEEEEccccccCCCC-Ch---hHHHHHcCCEEEEecc---cCcCC
Confidence 45555422 35888999999998888887 33 55543222 2322 23 4556677999998864 35678
Q ss_pred HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCcc--CCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCC---CCCCc
Q 037063 265 SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGAR--YSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLS---LFKPD 338 (588)
Q Consensus 265 ~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~--~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~---~~~~D 338 (588)
..+++.+|. ++|+++...|.+|. |.. .+++++ ++||++|+++++|+++...++ ...++. ..++|
T Consensus 146 ~~d~~~AIn--------e~ta~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~-~e~~l~~~la~GaD 215 (395)
T COG1921 146 LKDYELAIN--------ENTALLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVD-KEPDLREALALGAD 215 (395)
T ss_pred HHHHHHHhc--------cCCeeEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccc-cccchhHHHhcCCC
Confidence 899999999 78999888888875 554 466777 999999999999999866533 111221 24499
Q ss_pred EEEeccCccCCCCCCceEEEEEeCcchhcccCCC
Q 037063 339 FLICSFYKIFGENPSGFGCLFVKKSSASVLSGST 372 (588)
Q Consensus 339 ~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~ 372 (588)
.+++|++|+||. |+ .|+++.||+++++++...
T Consensus 216 LV~~SgdKllgG-Pq-aGii~GkKelI~~lq~~~ 247 (395)
T COG1921 216 LVSFSGDKLLGG-PQ-AGIIVGKKELIEKLQSHP 247 (395)
T ss_pred EEEEecchhcCC-Cc-cceEechHHHHHHHHhhh
Confidence 999999999984 77 799999999998886543
No 345
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.20 E-value=1.1e-08 Score=105.32 Aligned_cols=314 Identities=17% Similarity=0.125 Sum_probs=196.2
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHH----HHHHHHHhCCCCCCC----eEEEcC-CCchhHHHHHHHHHHhcC
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSS----AFKLLAESYPFYSNP----RLLTVY-DHENEAAALMIESSKKRG 248 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~----al~lv~~s~~~~~gd----~ll~~~-e~~s~~~~~~~~~a~~~G 248 (588)
.+++.++.+++.++-|.+ .|.+.+++-+ +=-++++.|--..|+ .+|.+. -|..|-. .|...|
T Consensus 108 l~li~~Lq~~L~~ITG~D----avsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA-----SAam~G 178 (496)
T COG1003 108 LELIYELQEWLKEITGMD----AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA-----SAAMAG 178 (496)
T ss_pred HHHHHHHHHHHHHhcCCc----eeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh-----hHhhcC
Confidence 678899999999999985 2777766432 122445555323333 244443 3433321 334569
Q ss_pred CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCcc-CCHHHH-HHHHHcCcEEEEeCC---CcC
Q 037063 249 ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGAR-YSYMWM-SVAAEKGWHVLLDAT---ALG 323 (588)
Q Consensus 249 ~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~-~pl~~I-~~a~~~g~~vvvDaa---~~~ 323 (588)
.+|+.|+.+ ++|.+|+++|++++. +++..+.++.+|+ .|.. -++.+| ++.|++|..|..|+| +.+
T Consensus 179 ~~VV~V~~~-~~G~VDlddLk~k~~--------~~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~v 248 (496)
T COG1003 179 FKVVVVKCD-ENGNVDLDDLRAKAE--------DNLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIV 248 (496)
T ss_pred ceEEEEecC-CCCCccHHHHHHHhc--------cceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhh
Confidence 999999999 899999999999998 7899999998876 5665 579999 999999999999999 444
Q ss_pred CC-CCCCCCCCCCCCcEEEeccCccCCC----CCCceEEEEEeCcchhcccCCC-C-CCCceEeeecCCCcccccccccc
Q 037063 324 SK-DMDTLGLSLFKPDFLICSFYKIFGE----NPSGFGCLFVKKSSASVLSGST-S-SVSTIMGIEPSFSEIIELETLDE 396 (588)
Q Consensus 324 ~~-d~~~l~l~~~~~D~vv~S~~K~~G~----~P~G~G~L~v~~~~~~~l~~~~-~-g~~g~v~~~~~~~~~~~~~~~~~ 396 (588)
++ ...++| +|++=.+.||-|.. +..|.|-+-|++.+..-|.... . .+ +... .....+
T Consensus 249 G~~rPGd~G-----~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~-~~y~--------~~~~~~-- 312 (496)
T COG1003 249 GLARPGDMG-----FDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDV-GEYR--------LDYDGK-- 312 (496)
T ss_pred ccccccccc-----cceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCC-cccc--------ccCCCC--
Confidence 42 234555 99999999996532 2346888999988776665321 0 00 0000 000000
Q ss_pred cccccCC-CCCccchhhHHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCc
Q 037063 397 SSQSKFP-ESSISGVSSKLVECKGLDHADALG---LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDR 472 (588)
Q Consensus 397 ~~f~e~G-T~~~~~~~~~~al~~aL~~l~~~G---~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~r 472 (588)
- -.| ...+.+- ...+..+.-++..+| +....+...-.++|+..+|+.- .+ + .|.+...-.+
T Consensus 313 --~-s~g~~~a~~Gs--~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--------y~-~-~y~~~~~~~H 377 (496)
T COG1003 313 --K-SIGVSAAPYGS--ASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--------YP-V-PYTGENRVAH 377 (496)
T ss_pred --c-cceeeccccCc--chHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--------Cc-c-ccCCCCccee
Confidence 0 011 1111111 134456777777765 7777777778899999999862 11 1 2333211111
Q ss_pred ccEEEEE-eecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCC
Q 037063 473 GPSLAFN-VFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTN 551 (588)
Q Consensus 473 g~iv~f~-~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t 551 (588)
--|+... +....| +...+|.|.|-.+|++--+-.+= +.. .| .+=|=+----+
T Consensus 378 E~ild~r~l~~~~G--v~~~DvAKrLlD~GfHaPT~~FP---------------liV--------~~--tLMIEPTEsEs 430 (496)
T COG1003 378 ECILDARPLKKETG--VRALDVAKRLLDYGFHAPTMYFP---------------LIV--------AG--TLMIEPTESES 430 (496)
T ss_pred EEEeechHhHhhcC--CcHHHHHHHHHhcCCCCCcccCc---------------ccc--------cc--ceeecCCCCCC
Confidence 1233333 222223 77888999888899875443221 000 11 44455555568
Q ss_pred HHHHHHHHHHHHHhhhh
Q 037063 552 FEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 552 ~eDv~~li~~l~~~l~~ 568 (588)
.+++|+|++++.++.++
T Consensus 431 k~eLDrf~dami~I~~E 447 (496)
T COG1003 431 KEELDRFIDAMIAIREE 447 (496)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999987644
No 346
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.20 E-value=1.7e-08 Score=109.94 Aligned_cols=347 Identities=13% Similarity=0.126 Sum_probs=198.4
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
++..|||..+. |--.+.+.+++.+.+..-..... ...+ .+...+
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~---------------------~~~~---------~~~~~~ 100 (457)
T PRK05639 51 DGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMI---------------------GYTH---------SERAIR 100 (457)
T ss_pred CCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhcccccc---------------------CccC---------CHHHHH
Confidence 68889998553 55567788887666532111000 0000 233446
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHH-----hcC-----CEE
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSK-----KRG-----ARV 251 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~-----~~G-----~~v 251 (588)
+-+++++.+.... ..|.|+.++++|+..++..-....|. +|+ ....||...... ..+.. +.+ -.+
T Consensus 101 lae~L~~~~p~~~--~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a-~s~~~~~~~~~~~~~~~~~~~ 177 (457)
T PRK05639 101 VAEKLAEISPIEN--PKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGA-TSVAAFQSSQKRGFSPLMPNV 177 (457)
T ss_pred HHHHHHhhCCCCc--CEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHH-HHHcCCCcccccCCCCCCCCc
Confidence 7777777765321 35999999999888766643222344 455 455677633322 11111 111 124
Q ss_pred EEEeccCCCC-------ccCHH--------HHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHc
Q 037063 252 SSAEFAWPNL-------RIHSG--------KLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEK 311 (588)
Q Consensus 252 ~~v~~~~~~~-------~i~~e--------~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~ 311 (588)
..+|...... .-+.+ .+++.|.. .....++...|++.-+....|.+.| ++.| ++|+++
T Consensus 178 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~--~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~ 255 (457)
T PRK05639 178 VWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFS--HVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEH 255 (457)
T ss_pred eEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHH--hhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 4555431100 00122 24443320 0011356888888888888888876 4457 899999
Q ss_pred CcEEEEeCCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCC
Q 037063 312 GWHVLLDATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSF 385 (588)
Q Consensus 312 g~~vvvDaa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~ 385 (588)
|+++|+|.++.. +. -...+++ .||+++ +-|.+|. ..++|++++++++++...... . ++
T Consensus 256 g~llI~DEv~tG~GrtG~~~a~~~~gv---~PDiv~--~gK~l~g-G~pi~av~~~~~i~~~~~~~~-~--~T------- 319 (457)
T PRK05639 256 GILLVMDEVQTGIGRTGKWFASEWFEV---KPDLII--FGKGVAS-GMGLSGVIGRKELMDLTSGSA-L--LT------- 319 (457)
T ss_pred CCEEEEechhhccCcCchHHHHHhcCC---CCCEEE--echhhcC-CCcceeEEehHHHHhhcCCCc-c--cC-------
Confidence 999999999653 21 1122333 499888 6896652 345899999998876211000 0 00
Q ss_pred CcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEe
Q 037063 386 SEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIY 464 (588)
Q Consensus 386 ~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~ 464 (588)
..|.| .+ .++..++|+.+.+ +.+.++.+.+.++|++.|.++... .+.+ .+-
T Consensus 320 ---------------~~g~p--~~---~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~-----~~~~~~Vr 371 (457)
T PRK05639 320 ---------------PAANP--VI---SAAAEATLEIIEE---ENLLKNALKVGEFIKKRLLEMKES-----FEVIGDVR 371 (457)
T ss_pred ---------------CCcCH--HH---HHHHHHHHHHHHH---ccHHHHHHHHHHHHHHHHHHHHHh-----CCCEEeec
Confidence 01111 11 2444466666655 556778888888888888875311 1211 111
Q ss_pred CCCCCCCcccEEEEEeecCCCCCc--CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEE
Q 037063 465 GPKVMFDRGPSLAFNVFDWNGTRI--DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVV 542 (588)
Q Consensus 465 ~p~~~~~rg~iv~f~~~~~~g~~i--~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~v 542 (588)
.+|.++.+.+....+..- ....+.+.+.++||.+.... .+..+|
T Consensus 372 ------G~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g----------------------------~~~~~l 417 (457)
T PRK05639 372 ------GKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYG----------------------------MFGNVI 417 (457)
T ss_pred ------cceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecC----------------------------CCCCEE
Confidence 346677766643221110 12345566667899885320 111389
Q ss_pred EEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 543 TAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 543 RvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
|+++.+..|.+||+.+++.+.+.++..
T Consensus 418 r~~Ppl~it~~~id~~~~~l~~~l~~~ 444 (457)
T PRK05639 418 RITPPLVITKEIAEKGLEIMERAIKDA 444 (457)
T ss_pred EEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988654
No 347
>PRK05965 hypothetical protein; Provisional
Probab=99.18 E-value=3.2e-08 Score=107.90 Aligned_cols=354 Identities=14% Similarity=0.068 Sum_probs=201.1
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+. |--.+.+++++.+.+....+..+ +| + ...+...
T Consensus 43 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~-------------~~---------------~-~~~~~~~ 93 (459)
T PRK05965 43 ASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATG-------------YF---------------H-FGSEPAI 93 (459)
T ss_pred CCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCccc-------------cc---------------c-cCCHHHH
Confidence 368899998755 45577888888766543111000 00 0 0123445
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--C----CCCC-eEE-EcCCCchhHHHHHHHHH------HhcC
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--F----YSNP-RLL-TVYDHENEAAALMIESS------KKRG 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--~----~~gd-~ll-~~~e~~s~~~~~~~~~a------~~~G 248 (588)
++-++|++.+..+. ..|.|+.++++|+..+++... + +++. +|+ ....||......+ .+. +..|
T Consensus 94 ~lae~L~~~~p~~~--~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~-s~t~~~~~~~~~~ 170 (459)
T PRK05965 94 RLAAKLAERAPGSL--NHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGA-GLTALPAFHRGFD 170 (459)
T ss_pred HHHHHHHhhCCCCc--CEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHH-HhcCCchhhcccC
Confidence 67777777763222 359999999999887765421 1 1233 355 5556775322111 110 0111
Q ss_pred ---CEEEEEeccCCCC---ccC--------HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHH
Q 037063 249 ---ARVSSAEFAWPNL---RIH--------SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAA 309 (588)
Q Consensus 249 ---~~v~~v~~~~~~~---~i~--------~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~ 309 (588)
..+..++...... .-+ .+++++.|.+ ...++...|++.-+....|.+.| ++.+ ++|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~----~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~ 246 (459)
T PRK05965 171 LPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAE----LGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACR 246 (459)
T ss_pred CCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHh----cCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHH
Confidence 1123343321110 012 2466777751 12246778888878887888776 3336 8899
Q ss_pred HcCcEEEEeCCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeec
Q 037063 310 EKGWHVLLDATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEP 383 (588)
Q Consensus 310 ~~g~~vvvDaa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~ 383 (588)
++|+++|+|.++.. +. -...++ ..||++++ -|-+|.+-.-+|++++++++.+.+.+..... +.
T Consensus 247 ~~gillI~DEV~tGfGRtG~~~a~~~~g---v~PDiv~~--gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~-~~----- 315 (459)
T PRK05965 247 ELGILFVADEVITGFGRTGPLFACEAEG---VVPDLMTV--AKGLTSGYVPMGAVLMSDHVYQGIADGAGAA-AP----- 315 (459)
T ss_pred HcCCEEEEechhccCccCchhhhHhhcC---CCCCeEEe--chhhccCCcceeEEEEcHHHHHHHhcccccc-cc-----
Confidence 99999999998653 21 122233 34999886 5855521013899999999877654211000 00
Q ss_pred CCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEE
Q 037063 384 SFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRI 463 (588)
Q Consensus 384 ~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i 463 (588)
|.-.+|..-..+ ..++..+.|+.+++ +.+.++.+.+.++|.+.|.++. . .+.+.
T Consensus 316 ---------------~~h~~T~~gnpl-~~Aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~l~~l~-~-----~~~v~- 369 (459)
T PRK05965 316 ---------------VGHGYTYSAHPV-SAAVGLEVLRLYHE---GGLLANGQKAGPRFAAGLDALR-A-----HPLVG- 369 (459)
T ss_pred ---------------ccccCCCCCCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhhc-c-----CCCEE-
Confidence 001112221111 12344456666655 5677888999999999998862 1 12221
Q ss_pred eCCCCCCCcccEEEEEeecCCC--CCcC-----HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCc
Q 037063 464 YGPKVMFDRGPSLAFNVFDWNG--TRID-----PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETR 536 (588)
Q Consensus 464 ~~p~~~~~rg~iv~f~~~~~~g--~~i~-----~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~ 536 (588)
. -..+|.++.+.+..... ...+ ...+...+.++||.++..
T Consensus 370 --~--vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~----------------------------- 416 (459)
T PRK05965 370 --D--VRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAF----------------------------- 416 (459)
T ss_pred --E--EeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEec-----------------------------
Confidence 1 01346677777643211 1111 234566667889988631
Q ss_pred CCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 537 SGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 537 ~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
|..+||+.+.+..|.+||+++++.+.+.|++.
T Consensus 417 -g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 417 -GDGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred -CCcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 11279999999999999999999999988763
No 348
>PRK06149 hypothetical protein; Provisional
Probab=99.17 E-value=3.8e-08 Score=116.57 Aligned_cols=308 Identities=13% Similarity=0.071 Sum_probs=180.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHH----hcCC---
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSK----KRGA--- 249 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~----~~G~--- 249 (588)
+...++.+++++++.-.. +.+.|++++++|+..+++....-.|. +|+ ....||......+ .+.. ..+.
T Consensus 624 ~~~~elae~L~~~~p~~~--~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~-~~s~~~~~~~~~~~~ 700 (972)
T PRK06149 624 AAVAEFSERLAALAPDGL--DTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATD-AVSTSIADNPQALET 700 (972)
T ss_pred HHHHHHHHHHHHhCCCCc--CEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHh-hhcCCccccccccCC
Confidence 445577788888873211 35999999999988777621111233 344 5666775332221 1100 0000
Q ss_pred ---EEEEEeccCCCCc--c---C-----HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHc
Q 037063 250 ---RVSSAEFAWPNLR--I---H-----SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEK 311 (588)
Q Consensus 250 ---~v~~v~~~~~~~~--i---~-----~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~ 311 (588)
-+..++.. ...+ . + .+++++.+... ....++...|++.-+....|.+.| ++.| ++|+++
T Consensus 701 ~~~~v~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~ 777 (972)
T PRK06149 701 RPDWVHPVESP-NTYRGRFRGADSAADYVRDVVAQLEEL--DASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR 777 (972)
T ss_pred CCCCeEEeCCC-cccCCcCCCcccHHHHHHHHHHHHHHH--hhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc
Confidence 12233221 1011 1 1 24455555310 112256788888888888899999 8889 999999
Q ss_pred CcEEEEeCCCc-CCCC------CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCC-CCCCCceEeeec
Q 037063 312 GWHVLLDATAL-GSKD------MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGS-TSSVSTIMGIEP 383 (588)
Q Consensus 312 g~~vvvDaa~~-~~~d------~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~-~~g~~g~v~~~~ 383 (588)
|+++|+|.+|. ++.. .+..|+ .||++ ++-|-+|. ..-+|++++++++++.+... .++ .+
T Consensus 778 g~llI~DEV~tGfGRtG~~~~a~e~~gv---~PDiv--t~gK~lg~-G~Pl~av~~~~~i~~~~~~~~~~~--sT----- 844 (972)
T PRK06149 778 GGVCIADEVQVGYGRLGHYFWGFEQQGV---VPDII--TMAKGMGN-GHPLGAVITRREIAEALEAEGYFF--SS----- 844 (972)
T ss_pred CCEEEEEeehhcCCccCccchhhhhcCC---CCCEE--EecccccC-CeeeEEEEEcHHHHhhhccCCccc--CC-----
Confidence 99999999973 3310 111233 49987 56896663 23489999999887766431 100 00
Q ss_pred CCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEE
Q 037063 384 SFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRI 463 (588)
Q Consensus 384 ~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i 463 (588)
..| |..+ .++..+.|+.+++ +++.++.+.+.++|+++|.++.-. .+.+..
T Consensus 845 -----------------~~g--nP~~---~aaala~L~~i~~---e~l~~~~~~~G~~l~~~L~~l~~~-----~~~i~~ 894 (972)
T PRK06149 845 -----------------TGG--SPVS---CRIGMAVLDVLRE---EKLQENARRVGDHLKARLEALADR-----HPLIGA 894 (972)
T ss_pred -----------------CCC--CHHH---HHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEE
Confidence 011 1111 2344456666655 567888888888888888876211 122221
Q ss_pred eCCCCCCCcccEEEEEeecCCCC--Cc--CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCc
Q 037063 464 YGPKVMFDRGPSLAFNVFDWNGT--RI--DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGV 539 (588)
Q Consensus 464 ~~p~~~~~rg~iv~f~~~~~~g~--~i--~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~ 539 (588)
+ ..+|.++.+.+...... .. ....+.+.+.++||.+.+.. ...
T Consensus 895 v-----rG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g----------------------------~~~ 941 (972)
T PRK06149 895 V-----HGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTG----------------------------DHL 941 (972)
T ss_pred E-----eecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecC----------------------------CCC
Confidence 1 13567777776421111 10 12345666677899886420 111
Q ss_pred cEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 540 SVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 540 ~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.+||+.+.+..|.+||+.+++.|.+.|++
T Consensus 942 ~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 942 NILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 28999999999999999999999998865
No 349
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.17 E-value=3.2e-08 Score=107.72 Aligned_cols=352 Identities=13% Similarity=0.063 Sum_probs=201.1
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+. |--.+.+.+++.+.+....+... ... ..+...
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~---------------------~~~---------~~~~~~ 100 (453)
T PRK06943 51 RDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAML---------------------AGC---------THEPAI 100 (453)
T ss_pred CCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccc---------------------ccc---------CCHHHH
Confidence 368889998644 77788888888776643111100 000 123445
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhC------CCCCCC-eEE-EcCCCchhHHHHHHHHHH----hc--C
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESY------PFYSNP-RLL-TVYDHENEAAALMIESSK----KR--G 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~------~~~~gd-~ll-~~~e~~s~~~~~~~~~a~----~~--G 248 (588)
++-+++++.++..- ..|.|+.++|+|+..+++.- .-.+|. +|+ ....||....-.+ .+.. +. +
T Consensus 101 ~lAe~L~~~~p~~~--~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gal-s~~~~~~~~~~~~ 177 (453)
T PRK06943 101 ELAERLAALTGGTL--GHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGAL-GVTDVALFKDAYD 177 (453)
T ss_pred HHHHHHHHhCCCCC--CEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhh-cccCChhhhcccc
Confidence 67777777765322 25999999999887766642 011233 455 5556775332211 1100 00 0
Q ss_pred ---CEEEEEeccCCCCc-----------cCHHHHHHHHhhhccccCCCcceEEEEeC-CCCCCCccCC----HHHH-HHH
Q 037063 249 ---ARVSSAEFAWPNLR-----------IHSGKLMKKIVGKRKKKKKKKRGLFVFPL-QSKVTGARYS----YMWM-SVA 308 (588)
Q Consensus 249 ---~~v~~v~~~~~~~~-----------i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~-~sn~tG~~~p----l~~I-~~a 308 (588)
..+..++.....+. -+.+++++.|.. ..++...|++.- +....|.+.| ++.+ ++|
T Consensus 178 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc 252 (453)
T PRK06943 178 PLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE-----RAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALC 252 (453)
T ss_pred cCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh-----CCCceEEEEEeccccccCCcccCCHHHHHHHHHHH
Confidence 11333433211000 123566767751 124677788876 4677788765 3346 889
Q ss_pred HHcCcEEEEeCCCcC-CCC-----CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeee
Q 037063 309 AEKGWHVLLDATALG-SKD-----MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIE 382 (588)
Q Consensus 309 ~~~g~~vvvDaa~~~-~~d-----~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~ 382 (588)
+++|+++|+|.++.. +.. .+.+++ .||++++ -|-+|.+=.-+|++++++++.+.+...... +
T Consensus 253 ~~~gillI~DEV~TG~GRtG~~fa~~~~gv---~PDivt~--gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~--~----- 320 (453)
T PRK06943 253 DRYGVHLIADEIAVGCGRTGTFFACEQAGV---WPDFLCL--SKGISGGYLPLSLVLSRDAIFAAFYDDDVT--R----- 320 (453)
T ss_pred HHcCCEEEeechhhCCCCCcchhHHHhCCC---CCCeEee--ehhhccCcccceEEEEcHHHHHhhcccCcc--C-----
Confidence 999999999998643 310 122333 4999887 685542101379999999887665421100 0
Q ss_pred cCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEE
Q 037063 383 PSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVR 462 (588)
Q Consensus 383 ~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~ 462 (588)
.|.-.+|..-..+ ..++..+.|+.+++ +.+.++++.+.++|.+.|.++.- .+.+.
T Consensus 321 ---------------~~~~~~T~~gnpl-~~aaa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~~l~~------~~~v~ 375 (453)
T PRK06943 321 ---------------GFLHSHSYTGNPL-ACRAALATLDLFAE---DDVLARNARKSARLRAALAPLAA------HPQVR 375 (453)
T ss_pred ---------------CccCCCCCCCCHH-HHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHhc------CCCEE
Confidence 0001122221111 12444566666665 45677888888888888887621 12222
Q ss_pred EeCCCCCCCcccEEEEEeecCCCCCc-CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccE
Q 037063 463 IYGPKVMFDRGPSLAFNVFDWNGTRI-DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSV 541 (588)
Q Consensus 463 i~~p~~~~~rg~iv~f~~~~~~g~~i-~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~ 541 (588)
-+ ..+|.++.+.+........ -...+.+.+.++||.++.. | ..
T Consensus 376 ~v-----rG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~------------------------------g-~~ 419 (453)
T PRK06943 376 HL-----RQRGTIFAFDVALDGDAARTFSRRFFEAALERELLLRPI------------------------------G-TT 419 (453)
T ss_pred eE-----eccccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEec------------------------------C-CE
Confidence 10 1356777777752110000 0234566677789987531 1 17
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHhhhhhhc
Q 037063 542 VTAALGCLTNFEDTYRLWAFVSRFLDADFV 571 (588)
Q Consensus 542 vRvSlg~~~t~eDv~~li~~l~~~l~~~~~ 571 (588)
+|+++.+..|.+||+++++.|.+.|++.+-
T Consensus 420 l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 449 (453)
T PRK06943 420 VYLMPPYVLDDDEIAWLAERTRATLDATLA 449 (453)
T ss_pred EEEeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987543
No 350
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.17 E-value=3e-08 Score=106.96 Aligned_cols=344 Identities=14% Similarity=0.104 Sum_probs=195.3
Q ss_pred CCCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
.++.-|||..+ .|--.+.+.+++.+.+..-..... +....+...
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~------------------------------~~~~~~~~~ 86 (422)
T PRK05630 37 EDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMF------------------------------GGLTHEPAI 86 (422)
T ss_pred CCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCccc------------------------------CCcCCHHHH
Confidence 36889999764 366677888887666643111000 000133445
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----CCCC-eEE-EcCCCchhHHHHHHHHHHh-------c
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----YSNP-RLL-TVYDHENEAAALMIESSKK-------R 247 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~~gd-~ll-~~~e~~s~~~~~~~~~a~~-------~ 247 (588)
++.+++++.+...- ..|.|+.++|+|+..++..-. + +++. +|+ ....||......+ .+... .
T Consensus 87 ~lae~L~~~~p~~~--~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~al-s~~~~~~~~~~~~ 163 (422)
T PRK05630 87 KLTRKLLNLTDNGL--DHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAM-SVCDPEGGMHSLW 163 (422)
T ss_pred HHHHHHHhhCCCCc--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHh-ccCCCcccccccc
Confidence 77777777764221 259999999998776655321 1 1233 455 5566775332221 11000 0
Q ss_pred C---CEEEEEeccCCCCccCH-------HHHHHHHhhhccccCCCcceEEEEeCC-CCCCCccCC----HHHH-HHHHHc
Q 037063 248 G---ARVSSAEFAWPNLRIHS-------GKLMKKIVGKRKKKKKKKRGLFVFPLQ-SKVTGARYS----YMWM-SVAAEK 311 (588)
Q Consensus 248 G---~~v~~v~~~~~~~~i~~-------e~l~~~i~~~~~~~~~~~t~Lv~~~~~-sn~tG~~~p----l~~I-~~a~~~ 311 (588)
+ ..+..+|.. .....+. +.+++.+. +++..|++.-+ ....|.+.| ++.| ++|+++
T Consensus 164 ~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~--------~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~ 234 (422)
T PRK05630 164 KGTLPEQIFAPAP-PVRGSSPQEISEYLRSLELLID--------ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKH 234 (422)
T ss_pred cccCCCCeEcCCC-cccCCChHHHHHHHHHHHHHHh--------hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc
Confidence 0 122334332 1111122 23333343 46777877764 666787665 3446 899999
Q ss_pred CcEEEEeCCCcC-CCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcc
Q 037063 312 GWHVLLDATALG-SKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEI 388 (588)
Q Consensus 312 g~~vvvDaa~~~-~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~ 388 (588)
|+++|+|.++.. +.. +-........||++ .+-|.+|.+-.-+|++++++++.+.+...... +.
T Consensus 235 g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~--t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~--~~---------- 300 (422)
T PRK05630 235 DILLIADEIATGFGRTGELFATLAAGVTPDIM--CVGKALTGGFMSFAATLCTDKVAQLISTPNGG--GA---------- 300 (422)
T ss_pred CCEEEEecceeCCCcCchhhHHHhcCCCCCee--eeechhhcCccccceeeccHHHHHHHhccCCC--Cc----------
Confidence 999999999743 210 10001112348988 55896641101268888898887766422100 00
Q ss_pred cccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCC
Q 037063 389 IELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKV 468 (588)
Q Consensus 389 ~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~ 468 (588)
|.-.+|..-..+ ..++..++|+.+++ +.+.+++..+.++|.+.|..+.. .+.+. +
T Consensus 301 ----------~~h~~T~~g~Pl-a~aaa~aaL~~l~~---~~~~~~~~~~g~~l~~~L~~l~~------~~~v~---~-- 355 (422)
T PRK05630 301 ----------LMHGPTFMANPL-ACAVAHASLEIIET---GMWRKQVKRIEAELIAGLSPLAH------LPGVA---D-- 355 (422)
T ss_pred ----------cccCCCCcCCHH-HHHHHHHHHHHHHh---CcHHHHHHHHHHHHHHHHHHhhc------CCCee---e--
Confidence 000112221111 12445567777765 34566888888888888876521 12221 1
Q ss_pred CCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCC
Q 037063 469 MFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGC 548 (588)
Q Consensus 469 ~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~ 548 (588)
-..+|.++.+.+.+. .....+...+.++||.++.. | .+||+.+.+
T Consensus 356 vRg~Gl~~~ie~~~~----~~~~~~~~~~~~~Gl~~~~~------------------------------g-~~l~~~PpL 400 (422)
T PRK05630 356 VRVLGAIGVVEMEQP----VDMEEATQAAVDHGVWLRPF------------------------------G-RLVYVMPPY 400 (422)
T ss_pred eeccccEEEEEECCc----ccHHHHHHHHHHCCeEEEec------------------------------C-CEEEEECCc
Confidence 013578888888642 22456777777899987531 1 289999999
Q ss_pred CCCHHHHHHHHHHHHHhhhh
Q 037063 549 LTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 549 ~~t~eDv~~li~~l~~~l~~ 568 (588)
..|.+||+++++.|.+.|++
T Consensus 401 ~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 401 ITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred cCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999998865
No 351
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.16 E-value=4.9e-08 Score=106.09 Aligned_cols=348 Identities=12% Similarity=0.134 Sum_probs=190.0
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+.-|||..+. |--.+.+++++.+.+.......+ .. ...+...
T Consensus 36 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~---------------------~~---------~~~~~~~ 85 (442)
T TIGR00709 36 VEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHT---------------------LD---------LTTPLKD 85 (442)
T ss_pred CCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccc---------------------cc---------cCcHHHH
Confidence 367889998654 66778888888766632111000 00 0134455
Q ss_pred HHHHHHHHHhCCCCCCceEEE-ecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHH----hcC-----CE
Q 037063 183 KIRKRIMDFMNISEDDYTLVF-TANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSK----KRG-----AR 250 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvf-t~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~----~~G-----~~ 250 (588)
++-+++++++.-......++| ++++++|+..+++....-.|. +|+ ....||...... ..+.. +.+ ..
T Consensus 86 ~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~-~s~t~~~~~~~~~~~~~~~ 164 (442)
T TIGR00709 86 AFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGA-LAVTGNLFAKNAVGMLMPG 164 (442)
T ss_pred HHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHH-HhhcCChhhhccCCCCCCC
Confidence 677777777642111123555 589999887766532111343 455 566677633322 22211 111 11
Q ss_pred EEEEeccCCCCcc--------CHH----HHHHHHhhhccccCCCcceEEEEeCCCCCCCccC-CH---HHH-HHHHHcCc
Q 037063 251 VSSAEFAWPNLRI--------HSG----KLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARY-SY---MWM-SVAAEKGW 313 (588)
Q Consensus 251 v~~v~~~~~~~~i--------~~e----~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~-pl---~~I-~~a~~~g~ 313 (588)
+..++.. ...+. +.+ .+++.+.. ......++..|++.-+.+..|... |- ++| ++|+++|+
T Consensus 165 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~ 241 (442)
T TIGR00709 165 VQFMPYP-HEYRCPFGIGGEAGSNASIEYFENFIED--VESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDI 241 (442)
T ss_pred cEEeCCC-ccccccccCCchhHHHHHHHHHHHHHHh--hccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 3333332 11111 111 13333320 001113456666666666667765 43 336 88999999
Q ss_pred EEEEeCCCcC-CCC-----CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCc
Q 037063 314 HVLLDATALG-SKD-----MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSE 387 (588)
Q Consensus 314 ~vvvDaa~~~-~~d-----~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~ 387 (588)
++|+|.++.. +.. ...++ ..||+++ +.|.+|. ..-+|+++++++ ++.+.+...+
T Consensus 242 llI~DEV~tGfGRtG~~~a~~~~g---v~PDiv~--~gK~l~~-G~Pigav~~~~~-~~~~~~~~~~------------- 301 (442)
T TIGR00709 242 KLILDEVQAGFGRSGTMFAFEHAG---IEPDFVV--MSKAVGG-GLPLAVLLIAPE-FDAWQPAGHT------------- 301 (442)
T ss_pred EEEEeccccCCCCCCchhHHHHcC---CCCcEEE--EcccccC-CcccEEEEEchH-HhccCCCcCC-------------
Confidence 9999998653 210 11223 3489888 6896653 234899999887 4433221111
Q ss_pred ccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCC
Q 037063 388 IIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGP 466 (588)
Q Consensus 388 ~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p 466 (588)
+|..-..+ ..++..++|+.+++ +.+.++.+.+.++|.+.|.++... .+.+ .+
T Consensus 302 ---------------~T~~gnpl-a~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~-----~~~v~~v--- 354 (442)
T TIGR00709 302 ---------------GTFRGNQL-AMVTGTEALNYWKD---DNLAQNAQERGERITSFLDDMIKE-----HPCIGNV--- 354 (442)
T ss_pred ---------------CCCCcCHH-HHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHh-----CCCeeee---
Confidence 11111111 12444566666655 456778888888888888876211 1211 11
Q ss_pred CCCCCcccEEEEEeecCCCC-----Cc--C---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCc
Q 037063 467 KVMFDRGPSLAFNVFDWNGT-----RI--D---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETR 536 (588)
Q Consensus 467 ~~~~~rg~iv~f~~~~~~g~-----~i--~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~ 536 (588)
..+|.++.+.+.+.... .. + ...+...+.++||.++...
T Consensus 355 ---rG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~---------------------------- 403 (442)
T TIGR00709 355 ---RGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGG---------------------------- 403 (442)
T ss_pred ---eccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecC----------------------------
Confidence 13567777776432110 00 0 2345566667899876421
Q ss_pred CCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 537 SGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 537 ~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.+..+||+.+.+..|.+||+.+++.+.+.|++
T Consensus 404 ~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 404 REGEVFRLLCPITIDQEECEEGISRFKQAVEE 435 (442)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 11128999999999999999999999998875
No 352
>PRK07483 hypothetical protein; Provisional
Probab=99.16 E-value=3.4e-08 Score=107.22 Aligned_cols=356 Identities=12% Similarity=0.048 Sum_probs=198.3
Q ss_pred CCCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+ .|--.+.+.+++.+.+....+.++ ... ..+...
T Consensus 27 ~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~---------------------~~~---------~~~~~~ 76 (443)
T PRK07483 27 ATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHT---------------------SFF---------TTEPAE 76 (443)
T ss_pred CCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccc---------------------ccc---------CCHHHH
Confidence 36888999865 466677888888766643111111 000 123445
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----CCCC-eEE-EcCCCchhHHHHHHHHHH------hcC
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----YSNP-RLL-TVYDHENEAAALMIESSK------KRG 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~~gd-~ll-~~~e~~s~~~~~~~~~a~------~~G 248 (588)
++.++|++++.-.. ..|.|+.++++|+..+++... + +++. +|+ ....||......+ .+.. ..+
T Consensus 77 ~lae~L~~~~p~~~--~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~-s~s~~~~~~~~~~ 153 (443)
T PRK07483 77 ALADRLVAAAPAGL--EHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGAL-AIGGNAWRREPFA 153 (443)
T ss_pred HHHHHHHHhCCCCC--CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHh-hhcCCcccccccC
Confidence 67777777764221 259999999998876665321 1 1343 365 4566776332221 1110 001
Q ss_pred ---CEEEEEeccCCCCcc------------CHHHHHHHHhhhccccCCCcceEEEEeCCCC-CCCccCC----HHHH-HH
Q 037063 249 ---ARVSSAEFAWPNLRI------------HSGKLMKKIVGKRKKKKKKKRGLFVFPLQSK-VTGARYS----YMWM-SV 307 (588)
Q Consensus 249 ---~~v~~v~~~~~~~~i------------~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn-~tG~~~p----l~~I-~~ 307 (588)
..+..++........ ..+++++.+. ....++...|++.-+.- .-|.+.| ++.| ++
T Consensus 154 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~l 229 (443)
T PRK07483 154 PLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKIL----ELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREV 229 (443)
T ss_pred CCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHH----hcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHH
Confidence 112333321110000 1245666554 11224677777777764 3577776 5567 89
Q ss_pred HHHcCcEEEEeCCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEee
Q 037063 308 AAEKGWHVLLDATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGI 381 (588)
Q Consensus 308 a~~~g~~vvvDaa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~ 381 (588)
|+++|+++|+|.++.. +. -...++ ..||++++ -|-+|.+-.-+|++++++++.+.+.+.. + .
T Consensus 230 c~~~gillI~DEV~tGfGRtG~~~a~~~~g---v~PDiv~~--gK~l~gG~~Pi~av~~~~~i~~~~~~~~-~---~--- 297 (443)
T PRK07483 230 CDRYGVLLILDEVMCGMGRTGTLFACEEDG---VAPDLVTI--AKGLGAGYQPIGAVLASDRIYDAIADGS-G---F--- 297 (443)
T ss_pred HHHhCCEEEEecceeCcccCcHHHHHhhcC---CCCCeeee--hhhhccCccccEEEEEcHHHHHHHhcCC-C---c---
Confidence 9999999999999653 21 012233 34998776 6855521012899999998876654211 0 0
Q ss_pred ecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE
Q 037063 382 EPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV 461 (588)
Q Consensus 382 ~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v 461 (588)
|...+|..-..+ ..++..+.|+.+++ +.+.++++.+.++|.+.|+++... .+.+
T Consensus 298 -----------------~~h~~T~~gnpl-~~aaa~a~l~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~-----~~~i 351 (443)
T PRK07483 298 -----------------FQHGHTYLGHAT-ACAAALAVQRVIAE---DGLLANVRARGEQLRARLRERLGQ-----HPHV 351 (443)
T ss_pred -----------------cccCCCCCCCHH-HHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhc-----CCCe
Confidence 001112211111 12444466666655 567888888888888888764211 1212
Q ss_pred -EEeCCCCCCCcccEEEEEeecCCC--CCcC-----HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCC
Q 037063 462 -RIYGPKVMFDRGPSLAFNVFDWNG--TRID-----PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTN 533 (588)
Q Consensus 462 -~i~~p~~~~~rg~iv~f~~~~~~g--~~i~-----~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~ 533 (588)
.+ ..+|.++.+.+.+..+ ...+ ...+.+.+.++||.+.....+. .+
T Consensus 352 ~~v------RG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~----------------~~---- 405 (443)
T PRK07483 352 GDI------RGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTI----------------DG---- 405 (443)
T ss_pred eeE------eecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccc----------------cC----
Confidence 11 1346677777643211 1111 2346666777999886421110 00
Q ss_pred CCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 534 ETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 534 ~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
..-.+||+.+-+..|.+||+.+++.|.+.|++
T Consensus 406 ---~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 406 ---VRGDHVLLAPPFIITAAQIDEIVERLGDAIDA 437 (443)
T ss_pred ---CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 00128999999999999999999999998875
No 353
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.16 E-value=5.2e-08 Score=105.37 Aligned_cols=341 Identities=11% Similarity=0.071 Sum_probs=195.6
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+.-|||..+. |.-.+.+++++.+.+.......+ ... ..+...+
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~---------------------~~~---------~~~~~~~ 92 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMF---------------------GGF---------THKPAIE 92 (427)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc---------------------ccc---------CCHHHHH
Confidence 56789997654 56677888887665532111000 000 1233456
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----CCCC-eEE-EcCCCchhHHHHHHHHHHh--------c
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----YSNP-RLL-TVYDHENEAAALMIESSKK--------R 247 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~~gd-~ll-~~~e~~s~~~~~~~~~a~~--------~ 247 (588)
+-+++++++...- ..|.|+.++|+|+..+++.-. + .+|. +|+ ....||......+ .+... .
T Consensus 93 la~~l~~~~~~~~--~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~-s~~~~~~~~~~~~~ 169 (427)
T TIGR00508 93 LCQKLVKMTPNAL--DCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAM-SVCDPENSMHSLYK 169 (427)
T ss_pred HHHHHHhhCCCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhh-cccCCccccccccc
Confidence 7777777764321 359999999998877665321 1 1233 354 6667776332221 11000 0
Q ss_pred C--CEEEEEeccCCCC-----ccCHHHHHHHHhhhccccCCCcceEEEEeCC-CCCCCccC----CHHHH-HHHHHcCcE
Q 037063 248 G--ARVSSAEFAWPNL-----RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQ-SKVTGARY----SYMWM-SVAAEKGWH 314 (588)
Q Consensus 248 G--~~v~~v~~~~~~~-----~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~-sn~tG~~~----pl~~I-~~a~~~g~~ 314 (588)
+ ..+..++...... .-+.+++++++.. ..++...|++.-+ +..-|... .++.| ++|+++|++
T Consensus 170 ~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~-----~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~l 244 (427)
T TIGR00508 170 GYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMEL-----HSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDIL 244 (427)
T ss_pred ccCCCCeEcCCCCccccchhHHHHHHHHHHHHHh-----cCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 0 0111222210000 0134567777751 1245778888875 55556544 35557 899999999
Q ss_pred EEEeCCCcC-CCC-----CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcc
Q 037063 315 VLLDATALG-SKD-----MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEI 388 (588)
Q Consensus 315 vvvDaa~~~-~~d-----~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~ 388 (588)
+|+|.++.. +.. ...++ ..||+++ +-|.++.+-.-++++++++++.+.+.....+ ..
T Consensus 245 lI~DEv~tG~Gr~G~~~~~~~~~---v~pDi~~--~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~--~~---------- 307 (427)
T TIGR00508 245 LIADEIATGFGRTGKLFACEHAG---VVPDILC--VGKALTGGYMTLSATVTTDKVAQTISSGEAG--CF---------- 307 (427)
T ss_pred EEEeccccCCCcCCccchhhhcC---CCCCEEE--echhhhcCcccceEEEEcHHHHHHHhcCCCC--cc----------
Confidence 999999742 210 11223 2489776 6896552111257888888877666432111 00
Q ss_pred cccccccccccccCCC--CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCC
Q 037063 389 IELETLDESSQSKFPE--SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGP 466 (588)
Q Consensus 389 ~~~~~~~~~~f~e~GT--~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p 466 (588)
. -.+| .+..+ .++..++|+.+.+ +.+.++++.+.++|.+.|+++.- .+.+. .
T Consensus 308 ---------~--~~~T~~g~p~~---~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~------~~~i~---~ 361 (427)
T TIGR00508 308 ---------M--HGPTFMGNPLA---CAVAEASLAILLE---GEWQKQVSAIENQLKRELSPLRK------NPVVK---D 361 (427)
T ss_pred ---------c--cCCCCCcCHHH---HHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhc------CCCEE---e
Confidence 0 0111 11112 2455567777765 34578888999999999988621 11111 0
Q ss_pred CCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec
Q 037063 467 KVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL 546 (588)
Q Consensus 467 ~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl 546 (588)
....|.++.+.+.+. .....+.+.+.++||.+... . ..+|+++
T Consensus 362 --vrg~G~~~~i~~~~~----~~~~~~~~~l~~~Gv~~~~~-----------------------------~--~~l~~~p 404 (427)
T TIGR00508 362 --VRVLGAIGVVEMYKP----VNVEELQKKFVEQGVWIRPF-----------------------------G--KLIYVMP 404 (427)
T ss_pred --EeccccEEEEEECCc----cCHHHHHHHHHHCCeEEEec-----------------------------C--CEEEEEC
Confidence 013478888887542 23566777788889987531 1 1799999
Q ss_pred CCCCCHHHHHHHHHHHHHhhhh
Q 037063 547 GCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 547 g~~~t~eDv~~li~~l~~~l~~ 568 (588)
....|.+||+++++.+.+.|++
T Consensus 405 pl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 405 PYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred CCCCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999998754
No 354
>PRK07046 aminotransferase; Validated
Probab=99.16 E-value=2.8e-08 Score=108.05 Aligned_cols=336 Identities=13% Similarity=0.075 Sum_probs=190.6
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|+|+.+. |--.+.+.+++.+.+.... . + + . ..+...+
T Consensus 73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~---~--------------~------~-~---------~~~~~~~ 119 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGL---T--------------T------M-L---------PSEDAAW 119 (453)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHHhCC---C--------------C------C-C---------CCHHHHH
Confidence 67889997543 4445778888766653211 0 0 0 0 1244456
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHH--------hcCC----
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSK--------KRGA---- 249 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~--------~~G~---- 249 (588)
+-++|.+.++. + .|.|+.++|+|...+++.-..-.|. +|+ ....||......+..... ..|.
T Consensus 120 lAe~l~~~~~~--~--~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~ 195 (453)
T PRK07046 120 VGEELARRFGL--P--YWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDL 195 (453)
T ss_pred HHHHHHHHhCC--C--EEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccc
Confidence 77777777753 2 4999999999887666543222344 465 444566522111111100 0011
Q ss_pred --EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCc
Q 037063 250 --RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATAL 322 (588)
Q Consensus 250 --~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~ 322 (588)
.+..++. -|.+.+++.+.. .+...|++.-+....|.+.| ++.+ ++|+++|+++|+|.++.
T Consensus 196 ~~~~~~~~~------nd~~~l~~~l~~-------~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t 262 (453)
T PRK07046 196 TATTRVVEF------NDLAALEAALAD-------GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT 262 (453)
T ss_pred cCceEeeCC------CCHHHHHHHhCC-------CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc
Confidence 1122221 167888888751 46788888888877888887 5678 99999999999999974
Q ss_pred ----CCCCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCC-CceEeeecCCCccccccccccc
Q 037063 323 ----GSKDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSV-STIMGIEPSFSEIIELETLDES 397 (588)
Q Consensus 323 ----~~~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~-~g~v~~~~~~~~~~~~~~~~~~ 397 (588)
.+--...+++ .||+++ +-|.+|. ..-+|++.+++++++.+.+..... .+.
T Consensus 263 fr~g~Gg~~~~~gv---~PDi~t--~gK~lgg-G~Pi~av~g~~~i~~~~~~~~~~~~~~~------------------- 317 (453)
T PRK07046 263 ISSGPGGYTRAHGL---EPDFLV--VGKPIAG-GVPCAVYGFSAELAERAQAAKASAPPGH------------------- 317 (453)
T ss_pred CccCCcchhHHhCC---Ccccee--ehhhhcC-CCcceeeeehHHHHHHHhhccccCCCCC-------------------
Confidence 2211122333 489876 5896652 233899999999887664321100 000
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE
Q 037063 398 SQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA 477 (588)
Q Consensus 398 ~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~ 477 (588)
.+ -.||.+-..+ .+++..+.|+.+++ +.+.+++..+.++|.++|.++.-.. +.+ +.+.+ .|.++.
T Consensus 318 ~~-~~~T~~gnpl-~~aa~~a~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~---~~~-~~v~g------~G~~~~ 382 (453)
T PRK07046 318 SG-IGTTLSANAL-AMAAMRATLAEVMT---EAAYAHMLALAARLAAGLRAVIARH---GLP-WHVTR------VGARVE 382 (453)
T ss_pred ce-eCCCCcccHH-HHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHhC---CCC-eEEEE------eCcEEE
Confidence 00 2334332222 12344455555544 4567788888888888887642111 122 23333 244555
Q ss_pred EEeecCCC-C------CcCH---HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecC
Q 037063 478 FNVFDWNG-T------RIDP---ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALG 547 (588)
Q Consensus 478 f~~~~~~g-~------~i~~---~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg 547 (588)
+.+.+... . ..+. ..+...+.++||.+... . ..+++|+.
T Consensus 383 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~-----------------------------~--~~~~~~p~ 431 (453)
T PRK07046 383 FQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPF-----------------------------H--NMMLVCPA 431 (453)
T ss_pred EEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEecc-----------------------------c--CcEEEeCC
Confidence 54422110 0 0011 23444455689887531 1 15788864
Q ss_pred CCCCHHHHHHHHHHHHHhhhh
Q 037063 548 CLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 548 ~~~t~eDv~~li~~l~~~l~~ 568 (588)
.|.+||+++++.+.+.++.
T Consensus 432 --~t~~did~~~~~~~~~l~~ 450 (453)
T PRK07046 432 --TTAADVDRLVAAFDACLGE 450 (453)
T ss_pred --CCHHHHHHHHHHHHHHHHH
Confidence 7999999999999988764
No 355
>PRK07481 hypothetical protein; Provisional
Probab=99.15 E-value=2.5e-08 Score=108.49 Aligned_cols=353 Identities=14% Similarity=0.118 Sum_probs=197.9
Q ss_pred CCCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+ .|--.+.+.+++.+.+....+..+ .. ....+...
T Consensus 39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-----------------------~~------~~~~~~~~ 89 (449)
T PRK07481 39 IDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYST-----------------------FD------GTTHPRAI 89 (449)
T ss_pred CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceec-----------------------cc------ccCCHHHH
Confidence 36788999854 355667788887666532111000 00 00134455
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--C----CCCC-eEE-EcCCCchhHHHHHHHHHHh------cC
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--F----YSNP-RLL-TVYDHENEAAALMIESSKK------RG 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--~----~~gd-~ll-~~~e~~s~~~~~~~~~a~~------~G 248 (588)
++-++|.++++- ++-..|.|++++|+|+..+++.-. . ++|. +|+ ....||......+ .+... .+
T Consensus 90 ~lae~L~~~~~~-~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~-s~~~~~~~~~~~~ 167 (449)
T PRK07481 90 ELSYELIDMFAP-EGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGA-SVNGNTVFRRNYE 167 (449)
T ss_pred HHHHHHHHhcCC-CCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhh-ccCCCcccccccC
Confidence 777788887742 122359999999998876665321 1 1343 355 5556765332111 11100 00
Q ss_pred ---CEEEEEeccCCC----CccCHHH--------HHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHH
Q 037063 249 ---ARVSSAEFAWPN----LRIHSGK--------LMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVA 308 (588)
Q Consensus 249 ---~~v~~v~~~~~~----~~i~~e~--------l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a 308 (588)
..+..++..... ..-+.++ +++.|. ....++...|++.-+....|.+.| ++.+ ++|
T Consensus 168 ~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~----~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc 243 (449)
T PRK07481 168 PLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIA----FQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVC 243 (449)
T ss_pred CCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHH----hcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHH
Confidence 112233221000 0012333 333333 112256888888888888898877 6668 999
Q ss_pred HHcCcEEEEeCCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeee
Q 037063 309 AEKGWHVLLDATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIE 382 (588)
Q Consensus 309 ~~~g~~vvvDaa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~ 382 (588)
+++|+++|+|.++.. +. -...++ ..||+++. -|.+|.+-.-+|++++++++++.+.+..... +
T Consensus 244 ~~~g~llI~DEV~tGfGRtG~~~a~~~~g---v~PDiv~~--gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~-~----- 312 (449)
T PRK07481 244 DRHGILLIADEVVTGFGRTGSWFGSRGWG---VKPDIMCL--AKGITSGYVPLGATMVNARIADAFEANADFG-G----- 312 (449)
T ss_pred HHcCCEEEEeehhhCcCcCchhhHhhhcC---CCCCEEEE--eecccCCCcCceEEEEcHHHHHHHhccCccc-c-----
Confidence 999999999998653 21 012233 34998776 6866521012799999998877664321100 0
Q ss_pred cCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-
Q 037063 383 PSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV- 461 (588)
Q Consensus 383 ~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v- 461 (588)
.+.-.+|.+-..+ ..++..+.|+.+++ +++.++++.+.++|.+.|.++... .+.+
T Consensus 313 ---------------~~~h~~T~~gnpl-~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~-----~~~i~ 368 (449)
T PRK07481 313 ---------------AIMHGYTYSGHPV-ACAAALATLDIVVR---EDLPANAAKRGAYLLEGLQPLKER-----FELVG 368 (449)
T ss_pred ---------------ccccCCCCCCCHH-HHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHhhc-----CCCeE
Confidence 0001223222222 12344455555554 567888888899998888876321 1211
Q ss_pred EEeCCCCCCCcccEEEEEeecCC--CCCcC-----HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCC
Q 037063 462 RIYGPKVMFDRGPSLAFNVFDWN--GTRID-----PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNE 534 (588)
Q Consensus 462 ~i~~p~~~~~rg~iv~f~~~~~~--g~~i~-----~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~ 534 (588)
.+- .+|.++.+.+.... .+..+ ...+...+.++||.++..
T Consensus 369 ~vr------G~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~--------------------------- 415 (449)
T PRK07481 369 DVR------GKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS--------------------------- 415 (449)
T ss_pred EEe------ecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec---------------------------
Confidence 111 34667777764321 11111 234556667789987542
Q ss_pred CcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 535 TRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 535 ~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
| ..+|+++.+..|.+||+.+++.+.+.|++
T Consensus 416 ---g-~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 445 (449)
T PRK07481 416 ---G-TKIILSPPLVIQREDVDRIVDALDAGLSA 445 (449)
T ss_pred ---C-CEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 1 16899999999999999999999998864
No 356
>PRK06917 hypothetical protein; Provisional
Probab=99.14 E-value=6e-08 Score=105.45 Aligned_cols=357 Identities=11% Similarity=0.067 Sum_probs=197.4
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+. |--.+.+.+++.+.+....+..+ +.. ..+...
T Consensus 28 ~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~-------------------------~~~-----~~~~~~ 77 (447)
T PRK06917 28 QNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYR-------------------------SQF-----TSEPAE 77 (447)
T ss_pred CCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccc-------------------------ccc-----CCHHHH
Confidence 367889997644 66678888888766643111100 000 134456
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhC------CCCCCC-eEE-EcCCCchhHHHHHHHHHHhcCC-----
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESY------PFYSNP-RLL-TVYDHENEAAALMIESSKKRGA----- 249 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~------~~~~gd-~ll-~~~e~~s~~~~~~~~~a~~~G~----- 249 (588)
++.+++++++... ...+.|+.++|+|+..+++.. .-.+|. +|+ ....||......+ ......+.
T Consensus 78 ~lae~L~~~~p~~--~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~al-s~~~~~~~~~~~~ 154 (447)
T PRK06917 78 KLAKKLSDLSPGD--LNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGAL-SMSGHPLRRQRFV 154 (447)
T ss_pred HHHHHHHHhCCCC--CCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHH-HhcCCccccccCC
Confidence 7888888876432 235999999999887766633 111343 455 4556666333222 21110000
Q ss_pred ----EEEEEeccCCC----Cc-------cCHHHHHHHHhhhccccCCCcceEEEEeCCCC-CCCccCC----HHHH-HHH
Q 037063 250 ----RVSSAEFAWPN----LR-------IHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSK-VTGARYS----YMWM-SVA 308 (588)
Q Consensus 250 ----~v~~v~~~~~~----~~-------i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn-~tG~~~p----l~~I-~~a 308 (588)
.+..++..... +. -+.+.+++.+++ ...++...|++.-+.. .-|.+.| ++.+ ++|
T Consensus 155 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~----~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc 230 (447)
T PRK06917 155 SLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIER----IGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEIC 230 (447)
T ss_pred CCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHh----cCCCceEEEEEeccccCcCceecCCHHHHHHHHHHH
Confidence 11222211000 00 023456666651 1123577777776654 3456665 3346 889
Q ss_pred HHcCcEEEEeCCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeee
Q 037063 309 AEKGWHVLLDATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIE 382 (588)
Q Consensus 309 ~~~g~~vvvDaa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~ 382 (588)
+++|+++|+|.++.. +. -...++ ..||+++ +-|.+|.+-.-+|++.+++++++.+.+.. +.
T Consensus 231 ~~~g~llI~DEv~tGfGRtG~~~a~~~~g---v~PDi~~--~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~----~~---- 297 (447)
T PRK06917 231 DHYDILFIADEVMTGLGRTGAMFAMEHWG---VEPDIMT--LGKGLGAGYTPIAATVVSDRVMEPILRGS----RS---- 297 (447)
T ss_pred HHcCCEEEEechhhCcCcccchhhHHhcC---CCCCEEE--eeehhccCCcceEEEEEcHHHHHHHhccC----cc----
Confidence 999999999998653 21 012233 2489864 57966621002789999988876554211 00
Q ss_pred cCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-
Q 037063 383 PSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV- 461 (588)
Q Consensus 383 ~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v- 461 (588)
.+ -.+|.+-..+ .+++..+.|+.+++ +.+.++++.+.++|.+.|.++... .+.+
T Consensus 298 ---------------~~-~~~T~~gnpl-~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~-----~~~i~ 352 (447)
T PRK06917 298 ---------------IM-SGHTLSANPL-SAATALAVLEYMEK---HNLPEKAAEKGEYLIKGLQKVQQQ-----STIIG 352 (447)
T ss_pred ---------------cc-cccCCCCCHH-HHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHhc-----CCCEE
Confidence 00 1122222221 12444566666654 457788888888888888876311 1212
Q ss_pred EEeCCCCCCCcccEEEEEeecCCC--CCcC-----HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCC
Q 037063 462 RIYGPKVMFDRGPSLAFNVFDWNG--TRID-----PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNE 534 (588)
Q Consensus 462 ~i~~p~~~~~rg~iv~f~~~~~~g--~~i~-----~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~ 534 (588)
.+- .+|.++.+.+..... +... ...+...+.++||.+......- .+
T Consensus 353 ~vr------G~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~----------------~g----- 405 (447)
T PRK06917 353 DVR------GKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQ----------------DG----- 405 (447)
T ss_pred EEe------ecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEeccccc----------------CC-----
Confidence 111 346677776642111 1111 2345566677899886431100 00
Q ss_pred CcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 535 TRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 535 ~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
.+...+|+++.+..|.+||+++++.+.+.|++.
T Consensus 406 --~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 406 --KEGDAVIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred --CCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 011389999999999999999999999988764
No 357
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.14 E-value=1.7e-08 Score=109.45 Aligned_cols=215 Identities=13% Similarity=0.124 Sum_probs=129.3
Q ss_pred HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCcC-CC-----CCCCCCCC
Q 037063 265 SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATALG-SK-----DMDTLGLS 333 (588)
Q Consensus 265 ~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~~-~~-----d~~~l~l~ 333 (588)
.+.++++|.+ ...+...|++.-+....|.+.| ++.| ++|+++|+++|+|.++.. +. -.+.+|+.
T Consensus 238 l~~l~~~l~~-----~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~ 312 (464)
T TIGR00699 238 LEEVEDLIKK-----WHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLD 312 (464)
T ss_pred HHHHHHHHHh-----cCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCC
Confidence 4556676651 1245888888888888999998 8888 999999999999999643 21 11223332
Q ss_pred CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhH
Q 037063 334 LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSK 413 (588)
Q Consensus 334 ~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~ 413 (588)
.+||++++ -|.+| |.|+++. ++.+....+.. ..+|..-..+ ..
T Consensus 313 -~~PDi~t~--gK~lg----~gG~~~~-~~~~~~~~~~~----------------------------~~~T~~gnp~-~~ 355 (464)
T TIGR00699 313 -DPPDMVTF--SKKFQ----TAGYFFH-DPAFRPNKPYR----------------------------QFNTWMGDPS-RA 355 (464)
T ss_pred -CCCCEEEe--hhhhc----cCCcccc-chhccCCCCcc----------------------------cccCCCCCHH-HH
Confidence 24898554 78664 1243332 22211000101 1112221111 12
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC-eEEEeCCCCCCCcccEEEEEeecCCCCCcCHHH
Q 037063 414 LVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIP-LVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 414 ~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~-~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~ 492 (588)
++..+.|+.+.+ +.+.+++..+.++|.+.|.++... .| .|.-+- ...+|.++.+.+.+. -....
T Consensus 356 aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~-----~~~~i~~vR---g~G~Glm~gie~~~~----~~~~~ 420 (464)
T TIGR00699 356 LILREIIQEIKR---KDLLENVAHVGDYLYTGLEDLQKK-----YPEFIQNLR---GKGRGTFIAWDTPDE----AKRDK 420 (464)
T ss_pred HHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHh-----CCCceeeec---ccCeEEEEEEecCCH----HHHHH
Confidence 444456676655 557778888888888888776210 12 121110 003577888876431 01345
Q ss_pred HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 493 VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 493 v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
+.+.+.++||.++.. |...||+++.+..|.+||+.+++.|.+.+
T Consensus 421 i~~~~~~~Gvl~~~~------------------------------g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 421 LLKKARNNGVNIGGC------------------------------GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred HHHHHHHCCcEEecC------------------------------CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 666677789987531 22389999999999999999999988753
No 358
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.14 E-value=5.1e-08 Score=105.55 Aligned_cols=335 Identities=16% Similarity=0.101 Sum_probs=191.0
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+. |--.+.+.+++.+.+..... + . . ..+...
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-----------------~------~-~---------~~~~~~ 96 (428)
T PRK12389 50 VDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVL-----------------Y------G-T---------PTELEI 96 (428)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCc-----------------c------C-C---------CCHHHH
Confidence 368899997443 44557788887666532110 0 0 0 023345
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHHh----------cCC-
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSKK----------RGA- 249 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~~----------~G~- 249 (588)
++-+++.+.+.- . ..+.|+.++|+|+..+++.-..-.|. +|+ ....||.... +....... .|.
T Consensus 97 ~la~~l~~~~p~-~--~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~-~~~~~~~~~~~~~~~~~~~~~~ 172 (428)
T PRK12389 97 EFAKMLKEAIPS-L--EKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSD-LVLVAAGSGPSTLGTPDSAGVP 172 (428)
T ss_pred HHHHHHHHhCCC-C--cEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChH-HHHHhcCCcccccCCCCCCCCC
Confidence 666777776541 2 35999999999988776633222344 455 4556776322 21111100 010
Q ss_pred -----EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeC
Q 037063 250 -----RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDA 319 (588)
Q Consensus 250 -----~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDa 319 (588)
.+..++. -|.+.+++.+.+ . .++...|++.-+....|.+.| +++| ++|+++|+++|+|.
T Consensus 173 ~~~~~~~~~~~~------~d~~~l~~~l~~----~-~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DE 241 (428)
T PRK12389 173 KSIAQEVITVPF------NDIEALKEALDK----W-GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDE 241 (428)
T ss_pred CcccCceEEcCC------CCHHHHHHHHHh----c-CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 1112221 157888888862 1 145788888888888999999 8889 99999999999999
Q ss_pred CCcCC-CC----CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 320 TALGS-KD----MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 320 a~~~~-~d----~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
++..- .. ...++ ..||++ ++-|.+|. ..-+|++++++++++.+.+. +. ..
T Consensus 242 V~tG~Rt~~~~a~~~~g---v~PDiv--t~gK~lgg-G~Pi~av~~~~~i~~~~~~~--~~-~~---------------- 296 (428)
T PRK12389 242 VITAFRFMYGGAQDLLG---VEPDLT--ALGKIIGG-GLPIGAYGGRKDIMEQVAPL--GP-AY---------------- 296 (428)
T ss_pred cccccccCcchhhHHhC---CCCCee--eechhhcC-CCceeEEeEHHHHHhhhccC--CC-cc----------------
Confidence 97642 10 11223 248975 56896552 12278889999887766421 10 00
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
-.+|..-..+ ..++..+.|+.+++ +.+.++++.+.++|++.|.++.... +. .+.+.+ .++
T Consensus 297 ------~~~T~~gnpl-~~Aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~---~~-~~~v~r------~~g 356 (428)
T PRK12389 297 ------QAGTMAGNPA-SMAAGIACLEVLQQ---EGVYEKLDRLGAMLEEGILEAAEKH---GI-TITINR------LKG 356 (428)
T ss_pred ------cccCCccCHH-HHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHhC---CC-CEEEEe------cCc
Confidence 1112221111 12444466666654 4577888888999988888752111 11 122211 123
Q ss_pred EEEEEeecCCCC------CcC---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEe
Q 037063 475 SLAFNVFDWNGT------RID---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAA 545 (588)
Q Consensus 475 iv~f~~~~~~g~------~i~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvS 545 (588)
++.+.+.+.... ..+ ...+.+.+.++||.+... +.+.+.++
T Consensus 357 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------------------------------~~~~~~~~ 406 (428)
T PRK12389 357 ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPS------------------------------KYEAWFLT 406 (428)
T ss_pred EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecC------------------------------CCCCeeec
Confidence 555544321110 001 234566677789988642 10133343
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhh
Q 037063 546 LGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 546 lg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+..|.|||+++++.+.+.+++
T Consensus 407 --l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 407 --TAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred --CCCCHHHHHHHHHHHHHHHHh
Confidence 667999999999999988753
No 359
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.12 E-value=1.8e-08 Score=115.16 Aligned_cols=303 Identities=13% Similarity=0.077 Sum_probs=185.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCC--CCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYS--NPRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~--gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
-+.+-+.+..|+++.|.+-.. --+-.++|++-..+..+..... ..+++++...|.....-++..++..|++++.
T Consensus 123 Lqal~e~Qtmi~~LtGm~vaN--ASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-- 198 (954)
T PRK12566 123 LEALLNFQQMTIDLTGLDLAN--ASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-- 198 (954)
T ss_pred HHHHHHHHHHHHHHhCchhhh--hhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE--
Confidence 456668899999999986432 2233355544333332322222 3456655544444555567777888888875
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcC---C-CCCCCC
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALG---S-KDMDTL 330 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~---~-~d~~~l 330 (588)
+++++.++ .++.-|++..+ |..|.+.++++| +++|++|++++ +++..+ - +...++
T Consensus 199 ----------~~~~~~~~--------~~~~~v~vq~P-~~~G~i~d~~~i~~~~h~~gal~~-~~~d~laL~ll~~Pge~ 258 (954)
T PRK12566 199 ----------DAVDNLAA--------HAVFGALLQYP-DTHGEIRDLRPLIDQLHGQQALAC-VAADLLSLLVLTPPGEL 258 (954)
T ss_pred ----------cchhhcCC--------CCEEEEEEECC-CCceEEccHHHHHHHHHHcCCEEE-EEeCHHHHhCCCChhhc
Confidence 23444444 45555666554 679999999999 99999999865 444222 1 123444
Q ss_pred CCCCCCCcEEEeccCcc---CCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcc-ccccccc-ccccccCCCC
Q 037063 331 GLSLFKPDFLICSFYKI---FGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEI-IELETLD-ESSQSKFPES 405 (588)
Q Consensus 331 ~l~~~~~D~vv~S~~K~---~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~-~~~~~~~-~~~f~e~GT~ 405 (588)
| +|+++.+.+-+ +|++..+.|++.++++....++-...| ........+.+ ..++.|. +-|- |-.|.
T Consensus 259 G-----ADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG---~s~D~~G~~a~~l~LqtREQHIRR-eKAtS 329 (954)
T PRK12566 259 G-----ADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIG---VSRDARGNTALRMALQTREQHIRR-EKANS 329 (954)
T ss_pred C-----CcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccc---eeecCCCCeeeehhhhHHHHHhhh-ccccc
Confidence 5 99998887752 122244689999999887777655544 22111111000 1111111 1022 78899
Q ss_pred CccchhhHHHHHHHHH--HHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecC
Q 037063 406 SISGVSSKLVECKGLD--HADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDW 483 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~--~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~ 483 (588)
|+.....+.++.+++- ++-..|+.+|.+++..++.+|.++|.+. ++++.... -=..+.+++ +
T Consensus 330 NICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~----------g~~~~~~~----fF~~~~v~~-~- 393 (954)
T PRK12566 330 NICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK----------GIKRLNRH----FFDTLTLEV-G- 393 (954)
T ss_pred hhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc----------CCccccCC----ccceEEEEc-c-
Confidence 9887655555555543 2233468899999999999999999884 34443210 001222333 1
Q ss_pred CCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 484 NGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 484 ~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
.....+...+.+.||.+|.- .. ..|.||+.-.+|.+||+.++..+.
T Consensus 394 ----~~~~~~~~~a~~~~~n~r~~----------------------------~~--~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 394 ----GAQAAIIESAEAARINLRIL----------------------------GR--GRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred ----CCHHHHHHHHHHCCCeeEEe----------------------------CC--CeEEEEeCCCCCHHHHHHHHHHhc
Confidence 12566777777789988742 02 279999999999999999999884
No 360
>PRK06148 hypothetical protein; Provisional
Probab=99.12 E-value=5.6e-08 Score=115.35 Aligned_cols=348 Identities=15% Similarity=0.130 Sum_probs=199.0
Q ss_pred CCCeeeecCC----CCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHH
Q 037063 109 LNNYVCFDYI----GHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKI 184 (588)
Q Consensus 109 ~~~~vyLD~a----~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~ 184 (588)
..+.-|||.. ..|--.+.+.+++.+.+.. . +.++ .. ..+...++
T Consensus 621 ~dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~-l--~~~~------------------------~~-----~~~~~~~l 668 (1013)
T PRK06148 621 NRGRAYLDCFNNVCHVGHAHPRVVAAAARQAAR-L--NTNT------------------------RY-----LHDAIVAY 668 (1013)
T ss_pred CCCCEEEEcccChhhcCCCCHHHHHHHHHHHhh-c--CCcC------------------------Cc-----CCHHHHHH
Confidence 3688999985 4455667788887666532 1 1110 00 13445567
Q ss_pred HHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHH----HHHHhcC----CEEEEE
Q 037063 185 RKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMI----ESSKKRG----ARVSSA 254 (588)
Q Consensus 185 r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~----~~a~~~G----~~v~~v 254 (588)
-+++++.+...- ..+.|+.++|+|+.++++.-..-.|. +|+ ....||......+. ..-+..+ ..+..+
T Consensus 669 Ae~L~~~~p~~~--~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~ 746 (1013)
T PRK06148 669 AERLTATLPDGL--TVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVA 746 (1013)
T ss_pred HHHHHHhCCCCc--CEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEc
Confidence 777777764321 35899999999988776643222344 355 55666653322111 0000001 112222
Q ss_pred eccC----CCCccC-------HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEe
Q 037063 255 EFAW----PNLRIH-------SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLD 318 (588)
Q Consensus 255 ~~~~----~~~~i~-------~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvD 318 (588)
+... +-+.-+ .+++++.+.. .....+++..|++.-+...-|.+.| ++.+ ++|+++|+++|+|
T Consensus 747 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~D 824 (1013)
T PRK06148 747 EVPDSYRGPERWPDAEHGRRFAESVAEQIAA--MAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIAD 824 (1013)
T ss_pred CCCCccccCCCCChhhhHHHHHHHHHHHHHh--hhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 2110 000001 1345555531 0112246788888888888899888 7778 9999999999999
Q ss_pred CCCcC-CC---C---CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccc
Q 037063 319 ATALG-SK---D---MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIEL 391 (588)
Q Consensus 319 aa~~~-~~---d---~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~ 391 (588)
.+|.. +. . ....| ..||++++ -|.+|. ..-+|++++++++++.+.+....
T Consensus 825 EVqtGfGRtG~~~~a~e~~g---v~PDivt~--gK~lgg-G~Plgav~~~~ei~~~~~~g~~~----------------- 881 (1013)
T PRK06148 825 EVQVGFGRVGSHWWAFETQG---VVPDIVTM--GKPIGN-GHPMGAVVTTREIADSFDNGMEY----------------- 881 (1013)
T ss_pred ecccCCCCCCCcchhhhhcC---CCcceeee--cccccC-CcceEEEEEcHHHHhhccCCCcc-----------------
Confidence 99753 31 0 11233 34998665 796652 23489999999887765431100
Q ss_pred ccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCCC
Q 037063 392 ETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVMF 470 (588)
Q Consensus 392 ~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~~ 470 (588)
.+|..-..+ ..++..+.|+.+++ +.+.++++.+.++|+++|+++.... +.+ .+-
T Consensus 882 ----------~~Tf~gnpl-a~aaa~a~L~~i~~---e~l~~~~~~~G~~l~~~L~~l~~~~-----~~i~~Vr------ 936 (1013)
T PRK06148 882 ----------FNTFGGNPV-SCAIGLAVLDIIED---EDLQRNALEIGNYLLAGLRELQDRF-----DIIGDVR------ 936 (1013)
T ss_pred ----------ccCCCCCHH-HHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhC-----CCceEEe------
Confidence 011111111 12344455666654 5677888888899988888763211 211 121
Q ss_pred CcccEEEEEeecCCCCCc-C---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec
Q 037063 471 DRGPSLAFNVFDWNGTRI-D---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL 546 (588)
Q Consensus 471 ~rg~iv~f~~~~~~g~~i-~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl 546 (588)
..|.++.+.+........ + ...+...+.++||.+.... ....+||+.+
T Consensus 937 G~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g----------------------------~~~~vlr~~P 988 (1013)
T PRK06148 937 GMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEG----------------------------PHDNVLKIRP 988 (1013)
T ss_pred eeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccC----------------------------CCCCEEEEeC
Confidence 245677776643211111 1 2345566667899886410 0012899999
Q ss_pred CCCCCHHHHHHHHHHHHHhhhh
Q 037063 547 GCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 547 g~~~t~eDv~~li~~l~~~l~~ 568 (588)
.+..|.+||+++++.|.+.|.+
T Consensus 989 pl~it~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 989 PLIFSRADADHLLEVLDDVLAA 1010 (1013)
T ss_pred CccCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998865
No 361
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.11 E-value=4.7e-08 Score=106.65 Aligned_cols=333 Identities=13% Similarity=0.086 Sum_probs=187.4
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+.-|+|+.+. |--.+.+.+++.+.+.... . | .. ..+...+
T Consensus 97 dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~---~--------------~------~~----------~~~~~~~ 143 (474)
T PLN02482 97 DGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGT---S--------------F------GA----------PCLLENV 143 (474)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHhhCC---C--------------C------CC----------CCHHHHH
Confidence 68899998653 4456788888876664211 0 0 00 1234446
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHH----------hcCC--
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSK----------KRGA-- 249 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~----------~~G~-- 249 (588)
+-++|.+.+.. . +.|.|+.++|+|...+++.-..-.|. +|+ ....||. ...++..... ..|.
T Consensus 144 lAe~l~~~~p~-~--~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG-~~~~~~~~~~~~~~~~~~~~~~g~~~ 219 (474)
T PLN02482 144 LAEMVIDAVPS-V--EMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHG-HADSFLVKAGSGVATLGLPDSPGVPK 219 (474)
T ss_pred HHHHHHHhCCC-C--CEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCC-CcchhhhhcCCCccccCCCCCCCCCC
Confidence 66667666632 1 35999999999888766543222344 465 4455665 2222111100 0011
Q ss_pred ----EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHH----HH-HHHHHcCcEEEEeCC
Q 037063 250 ----RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYM----WM-SVAAEKGWHVLLDAT 320 (588)
Q Consensus 250 ----~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~----~I-~~a~~~g~~vvvDaa 320 (588)
.+..++. -|.+++++.|.+ ...+...|++.-+....|.+.|.. .| ++|+++|+++|+|.+
T Consensus 220 ~~~~~~~~~~~------nd~~~l~~~l~~-----~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV 288 (474)
T PLN02482 220 AATSATLTAPY------NDLEAVKKLFEA-----NKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEV 288 (474)
T ss_pred CCCCCeEEecC------CChHHHHHHHHh-----CCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 1111221 167888888862 124678889998988899998844 57 999999999999999
Q ss_pred CcCCCCC------CCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 321 ALGSKDM------DTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 321 ~~~~~d~------~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
+.. ... ..++ ..||++ .+-|.+|. ..-+|++..++++++.+.+. + .
T Consensus 289 ~tG-fR~g~~ga~~~~g---v~PDi~--t~gK~lgg-G~Pigav~g~~ei~~~~~~~--~--~----------------- 340 (474)
T PLN02482 289 MTG-FRIAYGGAQEYFG---ITPDLT--TLGKVIGG-GLPVGAYGGRREIMEMVAPA--G--P----------------- 340 (474)
T ss_pred ccC-eecCcchHhHHhC---CCCCEE--EecchhhC-CCceEEEEEcHHHHHhhccC--C--C-----------------
Confidence 743 111 1123 248975 55896662 12378899999888766421 1 0
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
.+ -.+|.+-..+ .+++..+.|+.+++ +.+.+++..+.++|+++|.++.... |.|.+ + + ..++
T Consensus 341 ---~~-~~~T~~gnpl-~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~---g~~~~-~-~-----~v~g 402 (474)
T PLN02482 341 ---MY-QAGTLSGNPL-AMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAGKKA---GHEMC-G-G-----YISG 402 (474)
T ss_pred ---cc-cccCcchhHH-HHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHHhc---CCCEE-E-c-----ccce
Confidence 00 1223222221 12334455665544 4577888888888888888763211 12211 1 1 1123
Q ss_pred EEEEEeecCCC-----C-CcC---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEe
Q 037063 475 SLAFNVFDWNG-----T-RID---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAA 545 (588)
Q Consensus 475 iv~f~~~~~~g-----~-~i~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvS 545 (588)
++.+.+....- . .-+ ...+.+.+.++||.+.+.. .. . + .
T Consensus 403 ~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~----------------------------~~--~-~-~ 450 (474)
T PLN02482 403 MFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQ----------------------------FE--A-G-F 450 (474)
T ss_pred EEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccC----------------------------CC--C-C-c
Confidence 55444432100 0 001 1245556667899875420 00 0 0 1
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhh
Q 037063 546 LGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 546 lg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+.+..|.+|||++++.+.+.+++
T Consensus 451 psl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 451 TSLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHh
Confidence 45667999999999999988753
No 362
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.10 E-value=1.2e-07 Score=98.39 Aligned_cols=322 Identities=16% Similarity=0.081 Sum_probs=192.0
Q ss_pred hHHHHHHHHHHHHHhCCCC-------CCceEEEecCHHHHHHHHHHhCC------CCCC----------Ce-EE-EcCCC
Q 037063 178 SELESKIRKRIMDFMNISE-------DDYTLVFTANQSSAFKLLAESYP------FYSN----------PR-LL-TVYDH 232 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~-------~e~~vvft~g~T~al~lv~~s~~------~~~g----------d~-ll-~~~e~ 232 (588)
++++--+-++++++++.+. .+-.-++..+++++.-+++.+-. ++.+ .+ |. ...+.
T Consensus 112 TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqa 191 (511)
T KOG0628|consen 112 TELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQA 191 (511)
T ss_pred HHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcc
Confidence 6777788889988887642 12224444555555433322211 1222 12 33 33444
Q ss_pred chhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc
Q 037063 233 ENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK 311 (588)
Q Consensus 233 ~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~ 311 (588)
|+ ++ .+.+.-.|++++.++.+ .+..+..+.|+++|.++ ..+.--+-+|+.+..++.+-..-+++++ .+|+++
T Consensus 192 hs-sv---eka~~i~~VklR~l~td-~n~~mr~~~L~~AIe~D--~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~ 264 (511)
T KOG0628|consen 192 HS-SV---EKACLIAGVKLRALPTD-ENFGMRGDTLRKAIEED--IARGLIPFFVCATLGTTSSCAFDELEELGPVCREE 264 (511)
T ss_pred cc-hH---HHhHhhcceeEEEeecc-cCcCCCHHHHHHHHHHH--HhCCCccEEEEEeecCccccccccHHHhcchhhhc
Confidence 44 33 44566679999999998 58889999999999853 2222335566677777777777899999 999999
Q ss_pred CcEEEEeCCCcCC----CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcch--h--cccCCCCCCCceEeeec
Q 037063 312 GWHVLLDATALGS----KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSA--S--VLSGSTSSVSTIMGIEP 383 (588)
Q Consensus 312 g~~vvvDaa~~~~----~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~--~--~l~~~~~g~~g~v~~~~ 383 (588)
|++++||||-++. .....+-=....+|-+-+..|||+-. ---+..|++|+... . ...|.+.-...+.+ .
T Consensus 265 glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~v-nfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~-~- 341 (511)
T KOG0628|consen 265 GLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLV-NFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGS-A- 341 (511)
T ss_pred CEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEE-eeeeecceeecCceeeeeeecChHhhcchhhcc-C-
Confidence 9999999984432 11111111122389999999997654 34688999998731 1 11222211000000 0
Q ss_pred CCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHH---HHHHHHHHHHHcccCCCCCCCCCe
Q 037063 384 SFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRAR---YLINWLANALMNLHHPHSETGIPL 460 (588)
Q Consensus 384 ~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~---~L~~~l~~~L~~L~h~~~~~g~~~ 460 (588)
.|+.+++-.-.+|| -++...+ .+..+|.+++++|++ +|++.+.+-+.+ -+.
T Consensus 342 --~Dyrhwqipl~rRf--------------RSLKlWf-v~R~~Gve~lq~~iR~h~~La~~fe~lv~~---------d~~ 395 (511)
T KOG0628|consen 342 --PDYRHWQIPLGRRF--------------RSLKLWF-VLRSYGVENLQNYIREHVRLAKEFETLVRA---------DPR 395 (511)
T ss_pred --CCccccccccccch--------------hhHHHHH-HHHHHhHHHHHHHHHHHHHHHHHHHHHhhc---------CCc
Confidence 01111111111244 1222222 234557777777766 455555555444 367
Q ss_pred EEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCcc
Q 037063 461 VRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVS 540 (588)
Q Consensus 461 v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~ 540 (588)
+++..+. .-+.|.|++.+.+- ++...+.++-....|.+....+ .|.-
T Consensus 396 FE~~~~~----~lgLvcFRlk~~N~--~ne~Ll~~in~~g~i~l~~~~l---------------------------~gk~ 442 (511)
T KOG0628|consen 396 FEIVNKR----ILGLVCFRLKGDNE--INEALLNRLNSSGRIHLVPASL---------------------------HGKF 442 (511)
T ss_pred ceeeccc----ccceeEEeecCCcH--HHHHHHHHHHhcCcEEEEEeee---------------------------cceE
Confidence 8887763 35899999987531 3344455555666777754321 3444
Q ss_pred EEEEecC-CCCCHHHHHHHHHHHHHhhhh
Q 037063 541 VVTAALG-CLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 541 ~vRvSlg-~~~t~eDv~~li~~l~~~l~~ 568 (588)
+||...+ ..++.+||+..|+.|.+..+.
T Consensus 443 vlRf~V~s~~t~~~di~~a~~~I~~~a~~ 471 (511)
T KOG0628|consen 443 VLRFAVCSPLTNESDIDEAWKIIFEAADE 471 (511)
T ss_pred EEEEEecCCCCcHHHHHHHHHHHHHHHHH
Confidence 8999985 778899999999999887665
No 363
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.08 E-value=1e-07 Score=103.99 Aligned_cols=350 Identities=12% Similarity=0.118 Sum_probs=194.1
Q ss_pred CCCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|..+..|||..+. |--.+.+++++.+.+.......+ ... ..+..
T Consensus 59 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~---------------------~~~---------~~~~~ 108 (464)
T PRK06938 59 DVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHT---------------------LDL---------TTPVK 108 (464)
T ss_pred eCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccc---------------------ccc---------CCHHH
Confidence 3368899997543 66677888888766532110000 000 12333
Q ss_pred HHHHHHHHHHhCCCC-CCceEEEe-cCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHHh------cC---
Q 037063 182 SKIRKRIMDFMNISE-DDYTLVFT-ANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSKK------RG--- 248 (588)
Q Consensus 182 ~~~r~~ia~~lga~~-~e~~vvft-~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~~------~G--- 248 (588)
.++-+++.+.+...- ....++|. +++++|+..+++......|. +|+ ....||......+ .+... .+
T Consensus 109 ~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~al-s~t~~~~~~~~~~~~~ 187 (464)
T PRK06938 109 DQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGAL-SLMGNLGPKKPLGALL 187 (464)
T ss_pred HHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHH-hhcCCccccccCCCCC
Confidence 455556666553211 11247675 68899887766543222344 455 4556776333222 11100 00
Q ss_pred CEEEEEeccCCC----C-------ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcC
Q 037063 249 ARVSSAEFAWPN----L-------RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKG 312 (588)
Q Consensus 249 ~~v~~v~~~~~~----~-------~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g 312 (588)
..+..+++.... + ..+.+.+++.+.+ .....++...|++.-+...-|.+.| ++.+ ++|+++|
T Consensus 188 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~g 265 (464)
T PRK06938 188 PGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDD--PESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAG 265 (464)
T ss_pred CCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHh--hccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 123455543111 0 0124567777751 0011135778888877777788776 4446 8999999
Q ss_pred cEEEEeCCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCC
Q 037063 313 WHVLLDATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFS 386 (588)
Q Consensus 313 ~~vvvDaa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~ 386 (588)
+++|+|.++.. +. -.+.+|+ .||++++ -|.+|. ..-+|+++.+++. +.+.+...+
T Consensus 266 iLlI~DEV~tGfGRtG~~~a~e~~gv---~PDiv~~--gKglgg-G~PlsAv~~~~~~-~~~~~~~~~------------ 326 (464)
T PRK06938 266 IPLIVDEIQSGFGRTGKMFAFEHAGI---IPDVVVL--SKAIGG-SLPLAVVVYREWL-DTWQPGAHA------------ 326 (464)
T ss_pred CEEEEeccccCCCcCcHHHHHHhcCC---CCCEEEe--eccccC-CCceEEEeehhHh-hccCCCCCC------------
Confidence 99999998653 21 1223343 4999887 585552 2338888888764 433221111
Q ss_pred cccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeC
Q 037063 387 EIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYG 465 (588)
Q Consensus 387 ~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~ 465 (588)
+|..-..+ ..++..+.|+.+++ +++.++++.+.++|.+.|.+|.-. .|.+ .+-
T Consensus 327 ----------------~T~~gnpl-a~Aaa~a~L~~l~~---~~l~~~~~~~G~~l~~~L~~l~~~-----~~~i~~Vr- 380 (464)
T PRK06938 327 ----------------GTFRGNQM-AMAAGSATLRYIKE---HRLAEHAAAMGERLREHLRQLQRD-----YPQLGDVR- 380 (464)
T ss_pred ----------------CCCCcCHH-HHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHh-----CCCeeeee-
Confidence 11111111 12344455665554 567888899999999988876311 1211 111
Q ss_pred CCCCCCcccEEEEEeecCCCC-------CcC---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCC
Q 037063 466 PKVMFDRGPSLAFNVFDWNGT-------RID---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNET 535 (588)
Q Consensus 466 p~~~~~rg~iv~f~~~~~~g~-------~i~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~ 535 (588)
.+|.++.+.+.+..+. ..+ ...+...+.++||.++.+.
T Consensus 381 -----G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g--------------------------- 428 (464)
T PRK06938 381 -----GRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGG--------------------------- 428 (464)
T ss_pred -----ccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecC---------------------------
Confidence 3466777766432211 001 1335555667899876420
Q ss_pred cCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 536 RSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 536 ~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
....+||+.+.+..|.+||+.+++.+.+.|..
T Consensus 429 -~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 429 -RHGSVVRFLPPLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred -CCCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 00128999999999999999999999998865
No 364
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.08 E-value=8.3e-08 Score=100.48 Aligned_cols=331 Identities=12% Similarity=0.078 Sum_probs=193.1
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhccc-CcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHS-SAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~-~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
.+.-|.||+.. |--++.|.+++.+.+.. ..++.| ++.+-
T Consensus 51 DGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~P----------------------------------te~Ei 96 (432)
T COG0001 51 DGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAP----------------------------------TELEV 96 (432)
T ss_pred CCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCCC----------------------------------CHHHH
Confidence 57889999865 34466788888766643 122222 34444
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEE-EcCCCchhHHHHHHHHHH----------hcC--
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLL-TVYDHENEAAALMIESSK----------KRG-- 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll-~~~e~~s~~~~~~~~~a~----------~~G-- 248 (588)
++-+.|.+.+..- + -|-|++++|+|...+++--. +...++|+ ..--||. .+.++.--+. ..|
T Consensus 97 ~~Aell~~~~p~~-e--~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG-~~D~~lv~agsg~~t~g~p~s~Gvp 172 (432)
T COG0001 97 ELAELLIERVPSI-E--KVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHG-HSDSLLVKAGSGAATLGSPSSPGVP 172 (432)
T ss_pred HHHHHHHHhcCcc-c--EEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCC-CccHHHhhcCcCcccCCCCCCCCCC
Confidence 6667788777762 2 39999999999775544221 22334554 5555554 3333221111 011
Q ss_pred ----CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH----H-HHHHHcCcEEEEeC
Q 037063 249 ----ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW----M-SVAAEKGWHVLLDA 319 (588)
Q Consensus 249 ----~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~----I-~~a~~~g~~vvvDa 319 (588)
..+..+|++ |++.+++++.+ ..++...|.+.-+..--|.+.|.++ + ++|+++|+++|.|.
T Consensus 173 ~~~a~~ti~~~yN------D~~al~~~~~~-----~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DE 241 (432)
T COG0001 173 ADVAKHTLVLPYN------DLEALEEAFEE-----YGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDE 241 (432)
T ss_pred hhhhccEEEecCC------CHHHHHHHHHH-----cCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEec
Confidence 123344443 78899999872 1245666777766666899988555 6 89999999999999
Q ss_pred CCcC------CCCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccc
Q 037063 320 TALG------SKDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELET 393 (588)
Q Consensus 320 a~~~------~~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~ 393 (588)
+... + -..-+++ .||+. .+-|+.|. ..-+|++-.|++.++.+.|.-.
T Consensus 242 ViTGFR~~~gG-aq~~~gi---~PDlt--tlGKiIGG-GlP~ga~gGr~eiM~~~~p~g~-------------------- 294 (432)
T COG0001 242 VITGFRVALGG-AQGYYGV---EPDLT--TLGKIIGG-GLPIGAFGGRAEIMEQLAPLGP-------------------- 294 (432)
T ss_pred chhhcccCCcc-cccccCc---Ccchh--hhhhhhcC-CcceeeeccHHHHHhhhCCCCC--------------------
Confidence 8332 2 0122332 27764 46697763 3448999999999886554320
Q ss_pred ccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc
Q 037063 394 LDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG 473 (588)
Q Consensus 394 ~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg 473 (588)
.| ..||.+-..+ +++|-.++|+.+.+. +...+|+.++.+.|.+.|.++-... |++ +.+. ..+
T Consensus 295 ----vy-qaGT~sgnpl-amaAG~atl~~l~~~--~~~y~~l~~~~~~L~~gl~~~~~~~---g~~-~~v~------~~g 356 (432)
T COG0001 295 ----VY-QAGTLSGNPL-AMAAGLATLEELMTE--EGVYERLDALGERLAEGLRAAAERH---GIP-LTVN------RVG 356 (432)
T ss_pred ----cc-ccCCCCCcHH-HHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHHh---CCC-eEEe------eec
Confidence 23 5666665553 123333444444431 2367778888888877777643222 233 2222 235
Q ss_pred cEEEEEeecCCCCCcCH-----------HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEE
Q 037063 474 PSLAFNVFDWNGTRIDP-----------ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVV 542 (588)
Q Consensus 474 ~iv~f~~~~~~g~~i~~-----------~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~v 542 (588)
+++.+.+.+.. +.+. ..+.+.+.++||.+.++.+ . ..
T Consensus 357 sm~~i~F~~~~--~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~----------------------------e--a~ 404 (432)
T COG0001 357 SMFGIFFTEEG--VRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQF----------------------------E--AG 404 (432)
T ss_pred ceEEEEecCCC--CCCHHHHHhhchHHHHHHHHHHHhCCcccCCccc----------------------------c--ce
Confidence 56555544311 1111 1233355567887765421 0 22
Q ss_pred EEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 543 TAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 543 RvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
=+| ..+++|||++.++++.++++.
T Consensus 405 flS--~ahte~di~~~~~a~~~~~~~ 428 (432)
T COG0001 405 FLS--TAHTEEDIDRTLEAADEAFKE 428 (432)
T ss_pred eee--cccCHHHHHHHHHHHHHHHHH
Confidence 233 567999999999999887665
No 365
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.07 E-value=2e-07 Score=101.83 Aligned_cols=351 Identities=14% Similarity=0.078 Sum_probs=199.2
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+. |.-.+.+.+++.+.+..-.+.+. . . ...+...
T Consensus 44 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~------------------------~-~-----~~~~~~~ 93 (466)
T PRK07030 44 FEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVIL------------------------A-G-----FSHEPVI 93 (466)
T ss_pred CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccc------------------------c-c-----cCCHHHH
Confidence 368899998644 66677888887666643111110 0 0 0134455
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----CCCC-eEE-EcCCCchhHHHHHHHHHHh----c--C
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----YSNP-RLL-TVYDHENEAAALMIESSKK----R--G 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~~gd-~ll-~~~e~~s~~~~~~~~~a~~----~--G 248 (588)
++-+++++++.... ..|.|+.++++|+..+++... + ++|. +|+ ....||......+ .+... . +
T Consensus 94 ~lae~L~~~~p~~~--~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~-s~~~~~~~~~~~~ 170 (466)
T PRK07030 94 ELSERLVKITPPGL--SRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAM-SVGDVALFTETYK 170 (466)
T ss_pred HHHHHHHHhCCCCc--CEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHH-hccCCccccccCC
Confidence 77777777764222 359999999998876665321 1 1233 455 5556765332221 11000 0 0
Q ss_pred ---CEEEEEeccCCC----C-------ccCHHHHHHHHhhhccccCCCcceEEEEeC-CCCCCCccCC----HHHH-HHH
Q 037063 249 ---ARVSSAEFAWPN----L-------RIHSGKLMKKIVGKRKKKKKKKRGLFVFPL-QSKVTGARYS----YMWM-SVA 308 (588)
Q Consensus 249 ---~~v~~v~~~~~~----~-------~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~-~sn~tG~~~p----l~~I-~~a 308 (588)
..+..+|..... + .-+.+++++.|.+ ..++...|++.- +....|.+.| ++.+ ++|
T Consensus 171 p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~-----~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc 245 (466)
T PRK07030 171 PLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE-----HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREAC 245 (466)
T ss_pred ccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh-----CCCceEEEEEecccccCCCcccCCHHHHHHHHHHH
Confidence 112333332100 0 0123556666651 125677777776 5666788776 4447 899
Q ss_pred HHcCcEEEEeCCCcC-CCC-----CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeee
Q 037063 309 AEKGWHVLLDATALG-SKD-----MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIE 382 (588)
Q Consensus 309 ~~~g~~vvvDaa~~~-~~d-----~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~ 382 (588)
+++|+++|+|.++.. +.. ...+++ .||++++ -|.+|.+=.-+|++++++++.+.+....... +.
T Consensus 246 ~~~g~llI~DEV~TGfGRtG~~~a~~~~gv---~PDiv~~--gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~-~~---- 315 (466)
T PRK07030 246 DRYGVHLIHDEIAVGFGRTGTMFACEQAGI---RPDFLCL--SKALTGGYLPLAAVLTTDTVYQAFYDDYPTL-RA---- 315 (466)
T ss_pred HHcCCEEEEeehhhCcCccccchHHHhcCC---CCCEEee--ehhccCCcccceEEEecHHHHHHHhcccccc-cc----
Confidence 999999999998643 210 122333 4999887 6855521013799999998876553211000 00
Q ss_pred cCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEE
Q 037063 383 PSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVR 462 (588)
Q Consensus 383 ~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~ 462 (588)
+...+|..-..+ ..++..+.|+.+++ +++.++.+.+.++|.+.|.++. . .+.+.
T Consensus 316 ----------------~~h~~T~~gnpl-a~aaa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~~l~-~-----~~~v~ 369 (466)
T PRK07030 316 ----------------FLHSHSYTGNPL-ACAAALATLDIFEQ---DNVIENNRALARRMAEATAHLA-D-----HPHVA 369 (466)
T ss_pred ----------------cccCCCCCCCHH-HHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHh-c-----CCCEE
Confidence 001122221111 12444566777665 5677889999999999988862 1 12221
Q ss_pred EeCCCCCCCcccEEEEEeecCCCC--Cc--C---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCC
Q 037063 463 IYGPKVMFDRGPSLAFNVFDWNGT--RI--D---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNET 535 (588)
Q Consensus 463 i~~p~~~~~rg~iv~f~~~~~~g~--~i--~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~ 535 (588)
-+ ..+|.++.+.+...... .. + ...+.+.+.++||.++..
T Consensus 370 ~v-----rG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---------------------------- 416 (466)
T PRK07030 370 EV-----RQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL---------------------------- 416 (466)
T ss_pred Ee-----EeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEec----------------------------
Confidence 11 13566777776432111 00 1 124556666789987531
Q ss_pred cCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 536 RSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 536 ~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
| .+||+.+.+..|.+||+.+++.+.+.|++-
T Consensus 417 --g-~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 417 --G-SVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred --C-CEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 1 179999999999999999999999998764
No 366
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.06 E-value=9.4e-08 Score=104.30 Aligned_cols=349 Identities=9% Similarity=0.063 Sum_probs=199.0
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+.-|||..+. |--.+.+.+++.+.+..-.+... ... ..+...
T Consensus 53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~---------------------~~~---------~~~~~~ 102 (460)
T PRK06916 53 VNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTL---------------------LGL---------ANVPSI 102 (460)
T ss_pred CCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccc---------------------ccc---------CCHHHH
Confidence 368889997653 67778888888766643111100 000 134445
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCC------CCCC-eEE-EcCCCchhHHHHHHHHHHhc------C
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPF------YSNP-RLL-TVYDHENEAAALMIESSKKR------G 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~------~~gd-~ll-~~~e~~s~~~~~~~~~a~~~------G 248 (588)
++-++|++++.... ..+.|+.++|+|+..+++.... .+|. +|+ ....||......+ .+.... +
T Consensus 103 ~lae~L~~~~p~~~--~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~al-s~s~~~~~~~~~~ 179 (460)
T PRK06916 103 LLAEKLIEVVPEGL--KKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAV-SVGAIDLFHQVYS 179 (460)
T ss_pred HHHHHHHHhCCCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhH-hccCCcccccccC
Confidence 77788888764321 3599999999988776653311 2344 455 5566776333221 111000 0
Q ss_pred ---CEEEEEeccC----CCC-c------cCHHHHHHHHhhhccccCCCcceEEEEeC-CCCCCCccCC----HHHH-HHH
Q 037063 249 ---ARVSSAEFAW----PNL-R------IHSGKLMKKIVGKRKKKKKKKRGLFVFPL-QSKVTGARYS----YMWM-SVA 308 (588)
Q Consensus 249 ---~~v~~v~~~~----~~~-~------i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~-~sn~tG~~~p----l~~I-~~a 308 (588)
..+..+|... +.+ . -+.+++++.|+. ..++...|++.- +....|.+.| ++.+ ++|
T Consensus 180 ~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc 254 (460)
T PRK06916 180 SLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE-----KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLC 254 (460)
T ss_pred CCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh-----CCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHH
Confidence 1123333210 000 0 123456666641 124677777776 4666788764 3336 889
Q ss_pred HHcCcEEEEeCCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeee
Q 037063 309 AEKGWHVLLDATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIE 382 (588)
Q Consensus 309 ~~~g~~vvvDaa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~ 382 (588)
+++|+++|+|.++.. +. -...++ ..||+++ +-|-+|.+-.-+|++++++++++.+.+..... +.
T Consensus 255 ~~~g~llI~DEV~TG~GRtG~~~a~~~~g---v~PDiv~--~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~-~~---- 324 (460)
T PRK06916 255 TKYNVLFITDEVATGFGRTGKMFACEHEN---VTPDIMT--AGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQ-KT---- 324 (460)
T ss_pred HHcCCEEEeechhhCCCcCchhhHHHhcC---CCCCeee--eehhhhcCccccceeeecHHHHHHhhcccccc-Cc----
Confidence 999999999998643 21 011233 3499875 47855521013899999998876553211000 00
Q ss_pred cCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-
Q 037063 383 PSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV- 461 (588)
Q Consensus 383 ~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v- 461 (588)
.+ ..+|..-..+ .+++..+.|+.+.+ +.+.++++.+.+++.+.|.+|.. .+.+
T Consensus 325 ---------------~~-~~~T~~gnpl-~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~l~~l~~------~~~v~ 378 (460)
T PRK06916 325 ---------------FF-HGHSYTGNPL-GCAVALANLELYEK---TNLIEQVARKTEYVATQLEDLFA------LKHVG 378 (460)
T ss_pred ---------------cc-cCCCCCCCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhc------CCCeE
Confidence 00 1122221111 12444566666655 45778899999999999988621 1222
Q ss_pred EEeCCCCCCCcccEEEEEeecCCC--CCc----C-HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCC
Q 037063 462 RIYGPKVMFDRGPSLAFNVFDWNG--TRI----D-PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNE 534 (588)
Q Consensus 462 ~i~~p~~~~~rg~iv~f~~~~~~g--~~i----~-~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~ 534 (588)
.+- .+|.++.+.+.+... +.. . ...+...+.++||.++..
T Consensus 379 ~vr------G~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~--------------------------- 425 (460)
T PRK06916 379 DIR------QLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPL--------------------------- 425 (460)
T ss_pred Eee------cCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEec---------------------------
Confidence 111 346677776643211 111 0 234666677799987531
Q ss_pred CcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 535 TRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 535 ~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
| .++|+.+.+..|.+||+++++.+.+.|++
T Consensus 426 ---g-~~l~~~Ppl~it~~~id~~~~~l~~~l~~ 455 (460)
T PRK06916 426 ---G-NTIVFMPPLASTIDELDEMLRILYKAISD 455 (460)
T ss_pred ---C-CEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 1 18999999999999999999999998864
No 367
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.02 E-value=4.4e-07 Score=98.98 Aligned_cols=350 Identities=14% Similarity=0.149 Sum_probs=189.7
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|||..+. |--.+.+.+++.+.+.......+ ... ..+...
T Consensus 55 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~---------------------~~~---------~~~~~~ 104 (459)
T PRK06931 55 VEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHT---------------------LDL---------TTPLKD 104 (459)
T ss_pred CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccc---------------------ccc---------CCHHHH
Confidence 368889998555 66677888887666532110000 000 134445
Q ss_pred HHHHHHHHHhCCCCCCceE-EEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHHh----c-----CCE
Q 037063 183 KIRKRIMDFMNISEDDYTL-VFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSKK----R-----GAR 250 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~v-vft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~~----~-----G~~ 250 (588)
++-+++.+.+........+ +|++++|+|+..+++....-.|. +|+ ....||......+ .+... . ...
T Consensus 105 ~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~al-s~t~~~~~~~~~~~~~~~ 183 (459)
T PRK06931 105 AFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGAL-AVTGNLSPKNAVNGLMPG 183 (459)
T ss_pred HHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHH-hhcCCcccccCCCCCCCC
Confidence 6777777776432111235 45578899887666532211343 455 5566776333222 11100 0 122
Q ss_pred EEEEeccCCCCcc--------CHHHHHHHHhhhccc--cCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEE
Q 037063 251 VSSAEFAWPNLRI--------HSGKLMKKIVGKRKK--KKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHV 315 (588)
Q Consensus 251 v~~v~~~~~~~~i--------~~e~l~~~i~~~~~~--~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~v 315 (588)
+..+|.. ...+. +.+.+++.+.+.... ...++...|++.-+...-|.+.| ++.+ ++|+++|+++
T Consensus 184 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~Ll 262 (459)
T PRK06931 184 VQFMPYP-HEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILL 262 (459)
T ss_pred cEEeCCC-ccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 3444432 10000 122332222210000 11245777888777777788776 4557 8999999999
Q ss_pred EEeCCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccc
Q 037063 316 LLDATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEII 389 (588)
Q Consensus 316 vvDaa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~ 389 (588)
|+|.++.. +. -...+++ .||++++ -|-+|. ..-+|++..+++. +.+.+...+
T Consensus 263 I~DEV~tGfGRtG~~~a~~~~gv---~PDivt~--gK~l~g-G~Pi~av~~~~~~-~~~~~~~~~--------------- 320 (459)
T PRK06931 263 IVDEVQAGFARTGKMFAFEHAGI---EPDIIVM--SKAVGG-GLPLAVLGIKKEF-DAWQPGGHT--------------- 320 (459)
T ss_pred EEecchhcCCcCchHHHhhhcCC---CCCEEEe--cccccC-CcceeeeeeHHHH-hhccCCCCC---------------
Confidence 99998653 21 1223333 4998876 685542 1226777777653 433321111
Q ss_pred ccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCC
Q 037063 390 ELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKV 468 (588)
Q Consensus 390 ~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~ 468 (588)
+|..-..+ ..++..+.|+.+++ +.+.++.+.+.++|.+.|.++.-. .|.+ .+-
T Consensus 321 -------------~T~~gnpl-a~aaala~L~~l~~---~~l~~~~~~~G~~l~~~L~~l~~~-----~~~i~~vr---- 374 (459)
T PRK06931 321 -------------GTFRGNQL-AMATGLTTLKILKE---ENLAQNAAERGEWLKAQLAELQKR-----YPCIGNVR---- 374 (459)
T ss_pred -------------CCCCCCHH-HHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEeEe----
Confidence 11111111 12333455665554 457788888888888888876311 1211 111
Q ss_pred CCCcccEEEEEeecCCCC-------CcC---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCC
Q 037063 469 MFDRGPSLAFNVFDWNGT-------RID---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSG 538 (588)
Q Consensus 469 ~~~rg~iv~f~~~~~~g~-------~i~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g 538 (588)
..|.++.+.+.+.... ..+ ...+.+.+.++||.+..+. .+
T Consensus 375 --G~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~----------------------------~~ 424 (459)
T PRK06931 375 --GRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGG----------------------------RN 424 (459)
T ss_pred --cCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecC----------------------------CC
Confidence 3466777776432110 001 1235556667899886421 01
Q ss_pred ccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 539 VSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 539 ~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
..++|+.+.+..|.+||+.+++.+.+.|.+
T Consensus 425 ~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 425 GNVVRLLPPLLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred CCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence 128999999999999999999999998865
No 368
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.00 E-value=1.2e-07 Score=96.99 Aligned_cols=307 Identities=14% Similarity=0.186 Sum_probs=160.7
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHH--HHHHhC---------CCCCCCe--EEEcCCCchhHHHHHHHHHHhc
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFK--LLAESY---------PFYSNPR--LLTVYDHENEAAALMIESSKKR 247 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~--lv~~s~---------~~~~gd~--ll~~~e~~s~~~~~~~~~a~~~ 247 (588)
+.++|+.+++++|+++++ |+...|++-.+- ++..++ ||...++ .|.+...+ ..-..+++..
T Consensus 71 ipe~r~l~a~llgv~~~~--viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGY----DRHFai~E~~ 144 (425)
T PF12897_consen 71 IPEARELFAELLGVPPEN--VIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGY----DRHFAITEHF 144 (425)
T ss_dssp -HHHHHHHHHHHTS-GGG--EEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES------HHHHHHHHHC
T ss_pred hHHHHHHHHHHhCCCHHH--EEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCc----hHHHHHHHhh
Confidence 469999999999999876 777777765432 232222 3544444 44433321 1223567889
Q ss_pred CCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHH----HcCcEEEEeCCCc
Q 037063 248 GARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAA----EKGWHVLLDATAL 322 (588)
Q Consensus 248 G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~----~~g~~vvvDaa~~ 322 (588)
|++.+.||.. ++| .|++.+++++.++ ..-.++-++|--|||||..|+-+.+ ++|. ..+..++.|.|-.
T Consensus 145 Giemi~VpM~-~dG-PDmD~Ve~LV~~D-----~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~ 217 (425)
T PF12897_consen 145 GIEMIPVPMT-EDG-PDMDMVEELVAED-----PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYA 217 (425)
T ss_dssp T-EEEEEEEE-TTE-E-HHHHHHHTHTS-----TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTT
T ss_pred CcEEEecCCC-CCC-CCHHHHHHHHhcC-----CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCce
Confidence 9999999997 554 7999999998621 1346899999999999999998888 6653 4689999998833
Q ss_pred C----CCC-CCC-CCC-----CCCCCc--EEEeccCccCCCCCCceEEEEEeCcchhcccCCCCC-CCceEeeecCCCcc
Q 037063 323 G----SKD-MDT-LGL-----SLFKPD--FLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSS-VSTIMGIEPSFSEI 388 (588)
Q Consensus 323 ~----~~d-~~~-l~l-----~~~~~D--~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g-~~g~v~~~~~~~~~ 388 (588)
+ ... ... +++ ..-++| ++.+|.+|+.=. ..|++++..+++.++.++..... ++|.-
T Consensus 218 vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~-GaGva~~aaS~~Nl~~~~~~~~~~tIgpd--------- 287 (425)
T PF12897_consen 218 VHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFP-GAGVAFFAASEANLAWIKKHLSVQTIGPD--------- 287 (425)
T ss_dssp T-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-T-TSS-EEEEE-HHHHHHHHHHHHHH-S------------
T ss_pred EeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccC-CcceeeeecCHHHHHHHHHHhcCceeCcc---------
Confidence 3 210 011 111 012244 678899994331 56899999888877655443311 00110
Q ss_pred cccccccccccccCCCCCccchhhHHHHHHHHHHHHHh--CHHHHHHHHH--------HHHHHHHHHHH-cccCCCCCCC
Q 037063 389 IELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL--GLILISNRAR--------YLINWLANALM-NLHHPHSETG 457 (588)
Q Consensus 389 ~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~--G~~~i~~r~~--------~L~~~l~~~L~-~L~h~~~~~g 457 (588)
.+ . -+ +..+++... |+....++.. ...+.|.++|. .+
T Consensus 288 -Kv----------------N------QL-RHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~-------- 335 (425)
T PF12897_consen 288 -KV----------------N------QL-RHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL-------- 335 (425)
T ss_dssp -HH----------------H------HH-HHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG--------
T ss_pred -HH----------------H------HH-HHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC--------
Confidence 00 0 00 222333221 1222222111 22333444444 32
Q ss_pred CCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcC
Q 037063 458 IPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRS 537 (588)
Q Consensus 458 ~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~ 537 (588)
...+...| ..|-+++|++.+ | ....+..++++.||.+-.....-|. .+ +.
T Consensus 336 -~ia~Wt~P----~GGYFIsld~~~--G---~AkrvV~lakeAGV~LT~AGAtfPy-------------g~-------DP 385 (425)
T PF12897_consen 336 -GIASWTKP----KGGYFISLDVLD--G---TAKRVVELAKEAGVALTPAGATFPY-------------GK-------DP 385 (425)
T ss_dssp -TSEEE-------SBSS-EEEEEST--T----HHHHHHHHHHTTEE---TTTTSGG-------------G---------T
T ss_pred -CeeEecCC----CCceEEEEecCC--C---hHHHHHHHHHHhCceeCCCCCCCCC-------------CC-------CC
Confidence 23444444 346799999887 2 4788999999999998652222211 11 01
Q ss_pred CccEEEEecCCCCCHHHHHHHHHHHHHhhhhhhccc
Q 037063 538 GVSVVTAALGCLTNFEDTYRLWAFVSRFLDADFVEK 573 (588)
Q Consensus 538 g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~~~~~ 573 (588)
....|||++.+ -+.||++..++.+.-+++---+||
T Consensus 386 ~D~nIRiAPS~-P~leel~~Am~~~~~cv~la~~ek 420 (425)
T PF12897_consen 386 RDSNIRIAPSY-PSLEELETAMDVFATCVKLAAVEK 420 (425)
T ss_dssp TS-EEEE--SS-S-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEecCCC-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 12289999975 478999999999988777666664
No 369
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.98 E-value=3.4e-07 Score=99.48 Aligned_cols=216 Identities=15% Similarity=0.089 Sum_probs=128.4
Q ss_pred HHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCcC-CCC-----CCCCCCCC
Q 037063 266 GKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATALG-SKD-----MDTLGLSL 334 (588)
Q Consensus 266 e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~~-~~d-----~~~l~l~~ 334 (588)
+++++.|.+ ..+++..|++.-+...-|.+.| +++| ++|+++|+++|+|.++.. +.. .+.+++
T Consensus 213 ~~~~~~i~~-----~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-- 285 (443)
T PRK08297 213 AQARAAFER-----HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-- 285 (443)
T ss_pred HHHHHHHHh-----CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCC--
Confidence 445556641 2256888888888888888754 4457 899999999999999753 311 112332
Q ss_pred CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHH
Q 037063 335 FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKL 414 (588)
Q Consensus 335 ~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~ 414 (588)
.||+++ +.|.++ +|.+++.++..+.....+... .+ ..+|.+-..+ ..+
T Consensus 286 -~PDiv~--~gK~l~-----~~a~l~~~~i~~~~~~~~~~~----------------------~~-~~~T~~gnpl-~~a 333 (443)
T PRK08297 286 -RPDIVA--FGKKTQ-----VCGIMAGRRVDEVEDNVFAVS----------------------SR-INSTWGGNLV-DMV 333 (443)
T ss_pred -CCCEEE--eccccc-----ccceecchHHHHhhhhhccCc----------------------cc-cCCCCCccHH-HHH
Confidence 499886 478543 344445544322111111000 00 1223322221 123
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE--EEeCCCCCCCcccEEEEEeecCCCCCcCHHH
Q 037063 415 VECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV--RIYGPKVMFDRGPSLAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 415 al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v--~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~ 492 (588)
+..++|+.+.+ +.+.++++.+.+++.+.|.++.-. .+.+ .+- .+|.++.+.+.+. .....
T Consensus 334 aa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~-----~~~~~~~vr------g~G~~~~i~~~~~----~~~~~ 395 (443)
T PRK08297 334 RARRILEVIEE---DGLVENAARQGEYLLARLEELAAE-----FPAVVSNVR------GRGLMCAFDLPTT----ADRDE 395 (443)
T ss_pred HHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHH-----CCCcceeee------ccceEEEEEecCH----HHHHH
Confidence 33455555544 567788888888888888775211 1211 221 2467777777541 11334
Q ss_pred HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 493 VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 493 v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+.+.+.++||.+.++ |...+|+++.+..|.+||+++++.|.+.+++
T Consensus 396 ~~~~l~~~Gvl~~~~------------------------------~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~ 441 (443)
T PRK08297 396 VIRRLWEEGVLVLPC------------------------------GERSIRFRPALTVTTEEIDAAIDALRRALPE 441 (443)
T ss_pred HHHHHHHCCEEEecC------------------------------CCCeEEEECCccCCHHHHHHHHHHHHHHHHh
Confidence 566666899988542 1127999999999999999999999988764
No 370
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.97 E-value=4.5e-10 Score=115.13 Aligned_cols=173 Identities=16% Similarity=0.145 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHH--HHHHHHhcCCEEEEEec
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAAL--MIESSKKRGARVSSAEF 256 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~--~~~~a~~~G~~v~~v~~ 256 (588)
..+..+.+.++.+.|+. + .+++.|...|+-+++.++ -+|.+|+....+--++-.. +-+..+..|++++.|-.
T Consensus 47 ~R~~~v~~ll~~ltgAe--a--A~VvNnnaAAv~L~l~~l--a~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGt 120 (367)
T PF03841_consen 47 SRYAHVEELLCELTGAE--A--ALVVNNNAAAVLLALNTL--AKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGT 120 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccc--c--cccccccccccccccccc--cccccccccccccccccccccccccccccccccccccc
Confidence 34567788889999984 2 677788888888888886 4566765443332211111 23455677999988875
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCc----cCCHHHH-HHHHHcCcEEEEeCCCc---------
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGA----RYSYMWM-SVAAEKGWHVLLDATAL--------- 322 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~----~~pl~~I-~~a~~~g~~vvvDaa~~--------- 322 (588)
. .+...+|++++|+ ++|.++...|.||..-. ..+++++ ++||+||+++++|..+.
T Consensus 121 t---N~t~~~Dye~AI~--------e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~g 189 (367)
T PF03841_consen 121 T---NRTHLSDYEKAIT--------ENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYG 189 (367)
T ss_dssp ---------------------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT-
T ss_pred c---ccccccccccccc--------ccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCccccc
Confidence 3 3567889999998 89999999999998422 3478888 99999999999999872
Q ss_pred CCCCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccC
Q 037063 323 GSKDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSG 370 (588)
Q Consensus 323 ~~~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~ 370 (588)
+|....--..-..++|.+++|+-|++|. |. .|+++.|++++++++.
T Consensus 190 l~~Ep~v~~~~~~GaDlV~fSGdKlLGG-PQ-aGiI~Gkk~lI~~lk~ 235 (367)
T PF03841_consen 190 LPDEPTVQEYLAAGADLVTFSGDKLLGG-PQ-AGIIVGKKELIEKLKK 235 (367)
T ss_dssp ---------CCCCT-SEEEEETTSSSSS--S--EEEEEEHHHHHHHHH
T ss_pred CccccHHHHHhhcCCCEEEEECCCcCCC-CC-eEEEEeCHHHHHHHhh
Confidence 1210000111234599999999999984 77 6999999999998764
No 371
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.97 E-value=4.2e-07 Score=98.50 Aligned_cols=203 Identities=15% Similarity=0.075 Sum_probs=116.5
Q ss_pred CcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCc-CCCC-----CCCCCCCCCCCcEEEeccCccCCC
Q 037063 282 KKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATAL-GSKD-----MDTLGLSLFKPDFLICSFYKIFGE 350 (588)
Q Consensus 282 ~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~-~~~d-----~~~l~l~~~~~D~vv~S~~K~~G~ 350 (588)
.++..|++.-+....|.+.| ++.| ++|+++|+++|+|.++. ++.. .+.++ ..||++++ .|.+
T Consensus 217 ~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~g---v~PDi~~~--gK~~-- 289 (431)
T TIGR03251 217 HDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLG---VQPDIVAF--GKKT-- 289 (431)
T ss_pred CcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcC---CCCCEEEe--cccC--
Confidence 57888999989888898863 5557 89999999999999976 3311 11223 34999875 4532
Q ss_pred CCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHH
Q 037063 351 NPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLIL 430 (588)
Q Consensus 351 ~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~ 430 (588)
| ..|++ +.++..+......... + . ..+|..-..+ .+++..++|+.+.+.+
T Consensus 290 -~-~~g~~-~~~~i~~~~~~~~~~~-~--------------------~--~~~T~~gnpl-~~aaa~a~L~~l~~~~--- 339 (431)
T TIGR03251 290 -Q-VCGIM-AGRRVDEVADNVFAVP-S--------------------R--LNSTWGGNLV-DMVRATRILEIIEEER--- 339 (431)
T ss_pred -c-cceEE-ecchHHHhhhhcccCc-c--------------------c--cCCCCCCCHH-HHHHHHHHHHHHHhcC---
Confidence 2 23444 4443211111011000 0 0 1122211111 1245557777776644
Q ss_pred HHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEecccccc
Q 037063 431 ISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQ 510 (588)
Q Consensus 431 i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c 510 (588)
+.++++.+.+++.+.|.++... .+.+ .++. ..+|.++.+.+.+.+ ....+.+.+.++||.+...
T Consensus 340 l~~~~~~~g~~l~~~L~~l~~~-----~~~~--i~~v--rg~G~~~~i~~~~~~----~~~~~~~~l~~~Gvl~~~~--- 403 (431)
T TIGR03251 340 LVDNARVQGAHLLARLHELAAE-----FPHL--VSNP--RGRGLMCAFDLPSTA----DRDEVIRQLYREGVLLLGC--- 403 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-----Cccc--eecc--cccceeEEEEeCCHH----HHHHHHHHHHhCCeEEecC---
Confidence 4455555666666666553100 1211 1111 134677777775411 1334666677889987532
Q ss_pred CcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 511 NIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 511 ~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
|...+|+++++.+|.+||+++++.|.+
T Consensus 404 ---------------------------g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 404 ---------------------------GERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred ---------------------------CCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 112799999999999999999999875
No 372
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.94 E-value=5.1e-08 Score=99.49 Aligned_cols=340 Identities=14% Similarity=0.118 Sum_probs=192.7
Q ss_pred CeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHH
Q 037063 111 NYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMD 190 (588)
Q Consensus 111 ~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~ 190 (588)
=-+|-|-.|-.+.-++|.++-..-+... .+. +|. . ..| ....++.+++
T Consensus 33 IGvY~de~Gk~pvl~aV~~Ae~~l~~~~--~~k-------~Yl--------------~---i~G------~~~f~~~~~~ 80 (396)
T COG1448 33 IGVYKDEDGKTPVLRAVKKAEKRLLEQE--KTK-------NYL--------------P---IEG------LPEFLEAVQK 80 (396)
T ss_pred eeeeeCCCCCcchhHHHHHHHHHhhccc--ccc-------ccC--------------C---cCC------cHHHHHHHHH
Confidence 3489999999999888887743222111 110 111 0 001 1234444444
Q ss_pred H-hCCC-----CCCceEEEecCHHHHHHHHHHhCC-CCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec-cCCCCc
Q 037063 191 F-MNIS-----EDDYTLVFTANQSSAFKLLAESYP-FYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF-AWPNLR 262 (588)
Q Consensus 191 ~-lga~-----~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~-~~~~~~ 262 (588)
+ ||.+ ++.-.-+=|.|+|.|+++.++-+. +.+...|..+.....| + ..+.+..|.+|...|. +.++..
T Consensus 81 llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~N-H---~~If~~aGl~v~~Y~Yyd~~~~~ 156 (396)
T COG1448 81 LLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPN-H---KAIFEAAGLEVETYPYYDAETKG 156 (396)
T ss_pred HhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHh-H---HHHHHhcCCceeeeecccccccc
Confidence 3 5643 122123556899999999998763 2233335443333221 2 2344567999988875 445566
Q ss_pred cCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCC-CcCC--CCCCCCCC---
Q 037063 263 IHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDAT-ALGS--KDMDTLGL--- 332 (588)
Q Consensus 263 i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa-~~~~--~d~~~l~l--- 332 (588)
+|.+.+...|.+ ..++.-++.=.-++||||.-.+.++ | ++.+++|++.++|-| |..+ .+-+..++
T Consensus 157 ~df~~mla~L~~-----a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~ 231 (396)
T COG1448 157 LDFDGMLADLKT-----APEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLF 231 (396)
T ss_pred ccHHHHHHHHHh-----CCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHH
Confidence 898888888873 1133344444556899999998764 5 889999999999988 4443 11111111
Q ss_pred -CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchh
Q 037063 333 -SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVS 411 (588)
Q Consensus 333 -~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~ 411 (588)
.....=+++.|+.|.||....++|++.+--+..+...... +++... - |- ...+|+-.+..
T Consensus 232 a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~----sqlk~~----------i----R~-~ySnPP~~Ga~ 292 (396)
T COG1448 232 AEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVL----SQLKAI----------I----RT-NYSNPPAHGAA 292 (396)
T ss_pred HHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHH----HHHHHH----------H----Hh-ccCCCchhhHH
Confidence 1112356778999998865677998876533222111110 000000 0 00 11122222210
Q ss_pred hHHHHH--HHHH--HHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCC
Q 037063 412 SKLVEC--KGLD--HADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTR 487 (588)
Q Consensus 412 ~~~al~--~aL~--~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~ 487 (588)
.++.+. ..|+ +.++ ++.+++|+..+++.|++.|+++.-+ ..+..+. .+.++++|. +
T Consensus 293 vva~IL~~p~Lra~W~~E--l~~Mr~Ri~~mR~~lv~~L~~~~~~------~~f~~i~-----~Q~GMFsy~--G----- 352 (396)
T COG1448 293 VVATILNNPELRAEWEQE--LEEMRQRILEMRQALVDALKALGAP------RNFDFII-----SQRGMFSYT--G----- 352 (396)
T ss_pred HHHHHhCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhCCC------cccchHh-----hcCceeecC--C-----
Confidence 000000 1121 2222 6889999999999999999985211 1122222 234554444 4
Q ss_pred cCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 488 IDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 488 i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
+++++|.++.+++||.+-. .| |+++.-. |...|+.++++|.+.
T Consensus 353 ls~~QV~rLree~~IY~v~------------------------------sG----Ri~vaGl-~~~ni~~va~ai~~v 395 (396)
T COG1448 353 LSPEQVDRLREEFGIYLVA------------------------------SG----RINVAGL-NTSNIDYVAKAIAAV 395 (396)
T ss_pred CCHHHHHHHHHhccEEEec------------------------------CC----eeeeccC-ChhhHHHHHHHHHhh
Confidence 6799999999999998642 22 5565443 568999999988764
No 373
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.93 E-value=5.7e-07 Score=98.27 Aligned_cols=352 Identities=10% Similarity=0.035 Sum_probs=193.1
Q ss_pred CCCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|.++.-|||..+. |--.+.+.+++.+.+..-..... ... ..+..
T Consensus 60 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~---------------------~~~---------~~~~~ 109 (472)
T PRK08742 60 GHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVML---------------------AGF---------THEPA 109 (472)
T ss_pred eCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccc---------------------ccc---------CCHHH
Confidence 3367889997644 66677888887655532111000 000 02334
Q ss_pred HHHHHHHHHHhCCC---CCCceEEEecCHHHHHHHHHHhCC-C-----CCCC-eEE-EcCCCchhHHHHHHHHHH----h
Q 037063 182 SKIRKRIMDFMNIS---EDDYTLVFTANQSSAFKLLAESYP-F-----YSNP-RLL-TVYDHENEAAALMIESSK----K 246 (588)
Q Consensus 182 ~~~r~~ia~~lga~---~~e~~vvft~g~T~al~lv~~s~~-~-----~~gd-~ll-~~~e~~s~~~~~~~~~a~----~ 246 (588)
.++-+++++++... .+-..|.|+.++|+|+..+++... + +++. +|+ ....||......+ .... +
T Consensus 110 ~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gal-s~~~~~~~~ 188 (472)
T PRK08742 110 VQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGAL-AVGDIPLYR 188 (472)
T ss_pred HHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhh-hccCCcccc
Confidence 56777777776421 011259999999998877665431 1 1233 455 5566776332221 1100 0
Q ss_pred c--C---CEEEEEeccCCC---Ccc--------CHHHHHHHHhhhccccCCCcceEEEEeC-CCCCCCccCC----HHHH
Q 037063 247 R--G---ARVSSAEFAWPN---LRI--------HSGKLMKKIVGKRKKKKKKKRGLFVFPL-QSKVTGARYS----YMWM 305 (588)
Q Consensus 247 ~--G---~~v~~v~~~~~~---~~i--------~~e~l~~~i~~~~~~~~~~~t~Lv~~~~-~sn~tG~~~p----l~~I 305 (588)
. + ..+..+|..... ... +.+.+++.+.. ..++...|++.- +....|.+.| ++.+
T Consensus 189 ~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~iAAvI~EPviqg~gG~~~~p~~fl~~l 263 (472)
T PRK08742 189 RVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ-----SPGEICALILEPRLQCAGGMRMHHPAYLRRA 263 (472)
T ss_pred cccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh-----CCCceEEEEEccccccCCCcccCCHHHHHHH
Confidence 0 0 112334332000 001 23556666641 124677788876 4666788766 3346
Q ss_pred -HHHHHcCcEEEEeCCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCce
Q 037063 306 -SVAAEKGWHVLLDATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTI 378 (588)
Q Consensus 306 -~~a~~~g~~vvvDaa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~ 378 (588)
++|+++|+++|+|.++.. +. -...+| ..||++++ -|.+|.+-.-+|++++++++.+.+...... +.
T Consensus 264 r~lc~~~gillI~DEV~TGfGRtG~~~a~e~~g---v~PDiv~~--gKgl~gG~~Plaav~~~~ei~~~~~~~~~~--~~ 336 (472)
T PRK08742 264 RELCDAHGAFLIADEIATGFGRTGTLFACEQAG---VMPDLLCL--SKGLTGGFLPLSAVLATQQLYDAFLDDSRE--RA 336 (472)
T ss_pred HHHHHHcCCEEEEechhhCCCCCccchHHHhcC---CCCCEEEE--cccccCCCCCcceeeccHHHHHHhhccCcc--Cc
Confidence 889999999999998653 31 012233 34999887 686552101279999999887655321100 00
Q ss_pred EeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCC
Q 037063 379 MGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGI 458 (588)
Q Consensus 379 v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~ 458 (588)
|...+|.+-..+ ..++..+.|+.+++ +.+.++.+.+.++|.+.+..+. ..
T Consensus 337 --------------------~~h~~T~~gnpl-~~Aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~~~~~~------~~ 386 (472)
T PRK08742 337 --------------------FLHSHSYTGNPL-ACAAALATLDIFAD---DDVIARNQPTAARMTQLAAQIG------EH 386 (472)
T ss_pred --------------------cCcCCCCCccHH-HHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHh------cC
Confidence 001112221111 12455566777766 4456677777777765555431 01
Q ss_pred CeEEEeCCCCCCCcccEEEEEeecCCC--CCcC-----HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcC
Q 037063 459 PLVRIYGPKVMFDRGPSLAFNVFDWNG--TRID-----PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSG 531 (588)
Q Consensus 459 ~~v~i~~p~~~~~rg~iv~f~~~~~~g--~~i~-----~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~ 531 (588)
+.+ ++ -..+|-++.+.+..... +... ...+.+.+.++||.++..
T Consensus 387 ~~i---~d--vRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~------------------------ 437 (472)
T PRK08742 387 PHV---AD--VRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL------------------------ 437 (472)
T ss_pred CCe---ee--EeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec------------------------
Confidence 222 11 01356777777743111 1111 133555666789987531
Q ss_pred CCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 532 TNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 532 ~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
| .+||+.+.+..|.+||+.+++.|.+.|++
T Consensus 438 ------g-~vi~~~PpL~it~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 438 ------G-DVLYWMPPYCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred ------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1 28999999999999999999999998865
No 374
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.93 E-value=4.9e-07 Score=95.82 Aligned_cols=308 Identities=14% Similarity=0.097 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--C----CCCCe-EEE-cCCCchhHHHHH-----HHHHHh-
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--F----YSNPR-LLT-VYDHENEAAALM-----IESSKK- 246 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--~----~~gd~-ll~-~~e~~s~~~~~~-----~~~a~~- 246 (588)
..++-++++++..-. +=..|.||.|+++|+..+++... | +|..+ +++ ...||.+.+..| ......
T Consensus 89 a~~LA~~L~~~aP~~-~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~ 167 (449)
T COG0161 89 AIELAEKLAELAPEG-GLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAF 167 (449)
T ss_pred HHHHHHHHHHhCCCC-CccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhh
Confidence 457777888877621 11359999999999887766431 1 23333 553 566766444332 111101
Q ss_pred c---CCEEEEEeccC--CC---Cc------cCHHHHHHHHhhhccccCCCcceEEEEeCCCCC-CCccCC----HHHH-H
Q 037063 247 R---GARVSSAEFAW--PN---LR------IHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKV-TGARYS----YMWM-S 306 (588)
Q Consensus 247 ~---G~~v~~v~~~~--~~---~~------i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~-tG~~~p----l~~I-~ 306 (588)
. -..+..++... .. +. -..++|+++|.+ ...++...|++.-+.-- .|.+.| +++| +
T Consensus 168 ~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~----~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~ 243 (449)
T COG0161 168 YDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILE----HGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVRE 243 (449)
T ss_pred ccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHh----cCcccEEEEEecccccccCCcccCChHHHHHHHH
Confidence 1 11223333321 00 11 124567777762 22245555665555444 888887 4557 8
Q ss_pred HHHHcCcEEEEeCCCcC-C-----CCCCCCCCCCCCCcEEEeccCccC--CCCCCceEEEEEeCcchhcccCCCCCCCce
Q 037063 307 VAAEKGWHVLLDATALG-S-----KDMDTLGLSLFKPDFLICSFYKIF--GENPSGFGCLFVKKSSASVLSGSTSSVSTI 378 (588)
Q Consensus 307 ~a~~~g~~vvvDaa~~~-~-----~d~~~l~l~~~~~D~vv~S~~K~~--G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~ 378 (588)
+|++||+++|.|.+... + .-++..++ .||+++.+ |-+ |+ .-+|++++++++.+.+..-. . +.
T Consensus 244 iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi---~PDi~~~a--KGLT~GY--~Pl~a~l~~~~I~~~~~~~~-~--~~ 313 (449)
T COG0161 244 ICDKYGILLIADEVATGFGRTGKMFACEHAGI---VPDILCLA--KGLTGGY--LPLSAVLTSDRIYEAFSDGD-A--GA 313 (449)
T ss_pred HHHHcCcEEEeecceeCCCcCchhhhhhhcCC---CCCeeeec--ccccccc--hhhHhHhhhHHHHHHHhccc-C--Ce
Confidence 99999999999987322 2 12344443 49998764 733 22 22788888888877664332 1 11
Q ss_pred EeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHc-ccCCCCCCC
Q 037063 379 MGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMN-LHHPHSETG 457 (588)
Q Consensus 379 v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~-L~h~~~~~g 457 (588)
|--.-|..-..++ .++..+.|+.+++ +.+.+|++.+..+|.++|.+ +. +
T Consensus 314 --------------------f~HG~TYsghPla-cAaAla~L~i~e~---e~l~~~~~~~~~~l~~~L~~~l~------~ 363 (449)
T COG0161 314 --------------------FMHGHTYSGNPLA-CAAALANLDILEE---EDLLERVAEIGAYLQAGLQAALA------D 363 (449)
T ss_pred --------------------eccCCccccCHHH-HHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHhcc------c
Confidence 1001122222221 1222244455544 66788888999999999987 32 1
Q ss_pred CCeEEEeCCCCCCCcccEEEEEeecCCCCCc-----CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCC
Q 037063 458 IPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI-----DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGT 532 (588)
Q Consensus 458 ~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i-----~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~ 532 (588)
.|.| ++- ...|-+.++.+....+... -...+.+.+.++|+.+|+.
T Consensus 364 ~p~V---gdV--R~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~------------------------- 413 (449)
T COG0161 364 HPLV---GDV--RGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL------------------------- 413 (449)
T ss_pred CCcE---EEe--eccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec-------------------------
Confidence 1222 210 1345666777654433221 1345677788899999864
Q ss_pred CCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 533 NETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 533 ~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
|. .|=+++-+-.|.|||+++++.+.+.|+..
T Consensus 414 -----g~-~i~~~PPliit~~eid~l~~~l~~al~~~ 444 (449)
T COG0161 414 -----GD-VIYLMPPLIITREEIDELVDALREALDET 444 (449)
T ss_pred -----CC-EEEEcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 11 67788889999999999999999988764
No 375
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.88 E-value=8.8e-07 Score=96.01 Aligned_cols=209 Identities=12% Similarity=0.105 Sum_probs=113.6
Q ss_pred CCCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+.-|||..+ .|--.+.+.+++.+.+.... + | .. ......
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~--~---------------~------~~----------~~~~~~ 91 (431)
T PRK06209 45 VDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGC--N---------------F------TR----------PSAIEL 91 (431)
T ss_pred CCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCc--C---------------C------CC----------CCHHHH
Confidence 36888999854 35567788888766653210 0 0 00 022333
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCe-EEEc--CCCchhHHHHHHHH-HHhcCCE----EEEE
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPR-LLTV--YDHENEAAALMIES-SKKRGAR----VSSA 254 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~-ll~~--~e~~s~~~~~~~~~-a~~~G~~----v~~v 254 (588)
++-+++.+++.. . ..|.|+.++|+|+..+++.-..-.|.. |+.. ..+|+ ...|.... ....|.. ....
T Consensus 92 ~la~~l~~~~p~-~--~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~-~~~~~~g~~~~~~~~~~~~~~~~~ 167 (431)
T PRK06209 92 DAAESFLELIDG-A--DMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFS-TDDWFIGTTPMSAGIPASVSALTV 167 (431)
T ss_pred HHHHHHHHhCCc-c--ceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCcccc-ccccccccCCCCCCCChhHhcccc
Confidence 567777777632 1 259999999998887666322123444 5543 23332 01110000 0000110 0011
Q ss_pred eccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCC
Q 037063 255 EFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLS 333 (588)
Q Consensus 255 ~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~ 333 (588)
.+. .-|+++|+++|+. ..++...|++..+....+..-.+++| ++|+++|+++|+|.++. +......+..
T Consensus 168 ~~~----~~d~~~l~~~l~~-----~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t-G~~~~~~g~~ 237 (431)
T PRK06209 168 TFR----YNDIASLEALFED-----HPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMIT-GFRWHMRGAQ 237 (431)
T ss_pred ccC----CCCHHHHHHHHHh-----CCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccc-cCCcCcchhh
Confidence 111 1267889988862 11356677776654433333337788 99999999999999873 3211111111
Q ss_pred ---CCCCcEEEeccCccCCCCCCceEEEEEeCcchhc
Q 037063 334 ---LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASV 367 (588)
Q Consensus 334 ---~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~ 367 (588)
...||+ ..+-|.+|. ..-+|++..++++++.
T Consensus 238 ~~~gv~PDi--~t~gK~lgg-G~p~~av~~~~~i~~~ 271 (431)
T PRK06209 238 KLYGIVPDL--SCFGKALGN-GFAVSALAGKREYMEL 271 (431)
T ss_pred HHhCCCcce--eeehhhhcC-CcccEEEEEHHHHHhh
Confidence 124887 446897763 2237888888887664
No 376
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.87 E-value=5.4e-07 Score=95.18 Aligned_cols=320 Identities=12% Similarity=0.042 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC-CCCeEEEcCC-----CchhHHHHHHHHHHhcCCEEEE
Q 037063 180 LESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY-SNPRLLTVYD-----HENEAAALMIESSKKRGARVSS 253 (588)
Q Consensus 180 ~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~-~gd~ll~~~e-----~~s~~~~~~~~~a~~~G~~v~~ 253 (588)
-+.++++.++++||-. .+++|..++.+-+++...+ .+ +|+++....+ |.. .+......+...|+.++.
T Consensus 75 Sv~~Lee~vael~G~E----~alpthqGRgaE~Il~~~~-~~~~g~e~g~~~~~~~v~hn~-~fett~g~a~l~G~~~~~ 148 (467)
T TIGR02617 75 SYYALAESVKNIFGYQ----YTIPTHQGRGAEQIYIPVL-IKKREQEKGLDRSKMVAFSNY-FFDTTQGHSQINGCTARN 148 (467)
T ss_pred hHHHHHHHHHHHhCCc----eEEECCCCchHHHHHHHhh-cccccccccccccccccceEE-EEecchHHHHHcCceeec
Confidence 3568999999999984 2889988899988888887 56 6777553322 111 111112334557888877
Q ss_pred Eecc--------C-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCC-CCCccCCHHHH----HHHHHcCcEEEEeC
Q 037063 254 AEFA--------W-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSK-VTGARYSYMWM----SVAAEKGWHVLLDA 319 (588)
Q Consensus 254 v~~~--------~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn-~tG~~~pl~~I----~~a~~~g~~vvvDa 319 (588)
++.+ . ..|.+|+++|+++|.. ...++...+.....+| .-|..+|++.| ++|+++|+.+++|+
T Consensus 149 l~~~ea~~~~~~~~fkG~~dl~~le~~I~~----~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDg 224 (467)
T TIGR02617 149 VYTKEAFDTGVRYDFKGNFDLEGLERGIEE----VGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDS 224 (467)
T ss_pred ccchhhcccccCCCCCCCcCHHHHHHHHhh----cCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEh
Confidence 6421 1 3588999999999982 1111222222222233 35888998885 78999999999999
Q ss_pred C-----CcC---------CCCCCCCCCC-CCCCcEEEeccCccCCCCCCceEEEEEeCc----chhcccCCCCCCCceEe
Q 037063 320 T-----ALG---------SKDMDTLGLS-LFKPDFLICSFYKIFGENPSGFGCLFVKKS----SASVLSGSTSSVSTIMG 380 (588)
Q Consensus 320 a-----~~~---------~~d~~~l~l~-~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~----~~~~l~~~~~g~~g~v~ 380 (588)
| +++ ++++..+--. -..+|.+.+|+.|-+|. |.| |+|..+++ +.++++....-.-
T Consensus 225 ARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgA-pvG-g~Lag~d~~~~~l~~~~~~~~i~~E---- 298 (467)
T TIGR02617 225 ARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMV-PMG-GLLCFKDDSFFDVYTECRTLCVVQE---- 298 (467)
T ss_pred HHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCC-ccc-ceEEecchhHHHHHHHHHhhccccc----
Confidence 7 221 1111111000 02389999999998885 776 77777776 1223322110000
Q ss_pred eecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCe
Q 037063 381 IEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPL 460 (588)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~ 460 (588)
.|-..|..+ -..+.++..+|+..- ..+.+..|+.+ .+||.++|.+. |+|.
T Consensus 299 -----------------Gf~tYGGla---grd~ea~a~Gl~e~~--~~~yl~~ri~q-v~yl~~~L~~~-------Gvpi 348 (467)
T TIGR02617 299 -----------------GFPTYGGLE---GGAMERLAVGLYDGM--NLDWLAYRINQ-VQYLVNGLEEI-------GVVC 348 (467)
T ss_pred -----------------CCcCcCchh---HHHHHHHHhhhhhcc--cHHHHHHHHHH-HHHHHHHHHhC-------CCcE
Confidence 010111111 112355666665442 23555555544 46888888875 6776
Q ss_pred EEEeCCCCCCCcccEEEEE----eecCCCCCcCHHH-HHHHHHhCCcE-eccccccCcccccchHHHHHHHHhhhcCCCC
Q 037063 461 VRIYGPKVMFDRGPSLAFN----VFDWNGTRIDPAL-VQKLADRHNIS-LSCGFLQNIFFSGEYEQERVRVLETRSGTNE 534 (588)
Q Consensus 461 v~i~~p~~~~~rg~iv~f~----~~~~~g~~i~~~~-v~~~l~~~gI~-v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~ 534 (588)
++ .| |..|-+. ++.-.+....... ...+..+.||. +-.|++... +....+.
T Consensus 349 ~~-~G-------ghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~---------------rd~~~~~ 405 (467)
T TIGR02617 349 QQ-AG-------GHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLG---------------RDPKTGK 405 (467)
T ss_pred Ee-cC-------ccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecc---------------cCCCCCc
Confidence 55 33 2222221 1221222233333 34555677885 233332110 0000000
Q ss_pred C-cCCccEEEEecC--CCCCHHHHHHHHHHHHHhhhhh
Q 037063 535 T-RSGVSVVTAALG--CLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 535 ~-~~g~~~vRvSlg--~~~t~eDv~~li~~l~~~l~~~ 569 (588)
. ......||+.+. .| |.+.+|..++.|..+.+.-
T Consensus 406 ~~~~~~el~RlaipRrvy-t~~h~d~v~~~~~~~~~~~ 442 (467)
T TIGR02617 406 QLPCPAELLRLTIPRATY-TQTHMDFIIEAFKHVKENA 442 (467)
T ss_pred cCCCccceeeeccccccc-cHhHHHHHHHHHHHHHhhh
Confidence 0 122348999884 44 5699999999999876543
No 377
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.77 E-value=2.4e-06 Score=87.14 Aligned_cols=168 Identities=15% Similarity=0.185 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEe--cCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHH-------HHHhcCCE
Q 037063 180 LESKIRKRIMDFMNISEDDYTLVFT--ANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIE-------SSKKRGAR 250 (588)
Q Consensus 180 ~~~~~r~~ia~~lga~~~e~~vvft--~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~-------~a~~~G~~ 250 (588)
=.+.+.+..|+.||+. ..+|=. .|+|+|+.+++.++ ++|||++++...-|-.....++. ..+..|++
T Consensus 55 GRd~le~iyA~vfgaE---~ALVRpq~vSGTHAi~~~Lfg~-LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~ 130 (403)
T PF06838_consen 55 GRDKLERIYADVFGAE---DALVRPQFVSGTHAIALALFGV-LRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIK 130 (403)
T ss_dssp HHHHHHHHHHHHCT-S---EEEEETTS-SHHHHHHHHHHHH---TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-E
T ss_pred cHHHHHHHHHHHhCch---hhhhcccccchHHHHHHHHHhc-CCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCce
Confidence 3467777889999994 234433 48999999999999 99999977432222112222221 12456899
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCcc----CCHHHH----HHHHH--cCcEEEEeCC
Q 037063 251 VSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGAR----YSYMWM----SVAAE--KGWHVLLDAT 320 (588)
Q Consensus 251 v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~----~pl~~I----~~a~~--~g~~vvvDaa 320 (588)
...+++. +++.+|.+.++++|+ ++|++|.+.-. .|.- +.+++| +.+|+ .++.++||.|
T Consensus 131 Y~~v~L~-~dg~~D~~~i~~~~~--------~~tk~v~IQRS---rGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNC 198 (403)
T PF06838_consen 131 YREVPLT-EDGTIDWEAIKKALK--------PNTKMVLIQRS---RGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNC 198 (403)
T ss_dssp EEE--B--TTSSB-HHHHHHHHH--------TTEEEEEEE-S----TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-T
T ss_pred eEEEeec-CCCCcCHHHHHHhhc--------cCceEEEEecC---CCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 9999998 889999999999998 89999988643 4432 355665 44444 4899999998
Q ss_pred --CcCC-CCCCCCCCCCCCCcEEEeccCccC--CCCCCceEEEEEeCcchhccc
Q 037063 321 --ALGS-KDMDTLGLSLFKPDFLICSFYKIF--GENPSGFGCLFVKKSSASVLS 369 (588)
Q Consensus 321 --~~~~-~d~~~l~l~~~~~D~vv~S~~K~~--G~~P~G~G~L~v~~~~~~~l~ 369 (588)
.++- .....+| +|+++.|+-|-. |..|+| |++..|++++++..
T Consensus 199 YGEFvE~~EP~~vG-----ADl~aGSLIKNpGGgiAptG-GYIaGr~~lVe~~a 246 (403)
T PF06838_consen 199 YGEFVETQEPTEVG-----ADLMAGSLIKNPGGGIAPTG-GYIAGRKDLVERAA 246 (403)
T ss_dssp TTTTTSSS-GGGGT------SEEEEETTSGGGTTT-SS--EEEEESHHHHHHHH
T ss_pred cceeccccCccccc-----hhheeccceeCCCCCccCcC-CEEechHHHHHHHH
Confidence 3442 1223445 999999999944 355665 99999999987543
No 378
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.73 E-value=1.3e-06 Score=87.02 Aligned_cols=299 Identities=12% Similarity=0.091 Sum_probs=178.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHH-----hCCCC--CCCe--EEEc-CCCchhHHHHHH-----H
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAE-----SYPFY--SNPR--LLTV-YDHENEAAALMI-----E 242 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~-----s~~~~--~gd~--ll~~-~e~~s~~~~~~~-----~ 242 (588)
.++..+..+.+..+|+-+ -|.-+..+.+|...++. ++..+ |.++ |++. ..+|.-....+. .
T Consensus 100 nd~~~~f~~~vt~lf~~~----kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~d 175 (427)
T KOG1402|consen 100 NDVLGEFAEYVTKLFGYD----KVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPD 175 (427)
T ss_pred hhhHHHHHHHHHHhcCcc----eeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcc
Confidence 566778888999999974 15555555665544433 33222 4344 4433 333321100000 0
Q ss_pred HHHhcC----CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCc
Q 037063 243 SSKKRG----ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGW 313 (588)
Q Consensus 243 ~a~~~G----~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~ 313 (588)
.-+..| ..+..||.. |.++|+.+|+. ++...|.+.-.+-.-|++.| +..+ ++|++|++
T Consensus 176 s~~~fgp~~P~~~~~v~Y~------d~eale~~l~~-------~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynv 242 (427)
T KOG1402|consen 176 SWDGFGPFLPGVVDKVPYG------DAEALEVALKS-------PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNV 242 (427)
T ss_pred hhhccCCCCCCcceeeccC------CHHHHHHHhcC-------CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcE
Confidence 001111 113333332 67899999973 78899999999999999998 5567 89999999
Q ss_pred EEEEeCCCcCC---CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccc
Q 037063 314 HVLLDATALGS---KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIE 390 (588)
Q Consensus 314 ~vvvDaa~~~~---~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~ 390 (588)
++|.|..|..- -.+-..+.+..+||+++. -|.++.+-.-+.+++..++++-.++|...|. +
T Consensus 243 l~I~DEvQTGl~RTGk~la~d~env~PDivil--gKalSGG~~Pvsavl~~~~im~~~~pgeHgs--T------------ 306 (427)
T KOG1402|consen 243 LLIADEVQTGLARTGKLLACDYENVRPDIVIL--GKALSGGVYPVSAVLADDDIMLNIKPGEHGS--T------------ 306 (427)
T ss_pred EEEehhhhhcccccCcEEEeehhhcCCCeEEE--eccccCCeeeeEEEEecHHHHhccCCCcccc--c------------
Confidence 99999998762 113344556667999885 4755422333677777888776666554431 0
Q ss_pred cccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCC
Q 037063 391 LETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVM 469 (588)
Q Consensus 391 ~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~ 469 (588)
| .| |..+. +...++|+.+.+ +++.+|...|-..++++|.+|+-+ .|.+ +.+
T Consensus 307 --------y--gg--NpLg~---~vaiAalevi~e---ekL~era~~lG~~l~~~L~~l~~~-----~p~~v~~V----- 358 (427)
T KOG1402|consen 307 --------Y--GG--NPLGC---AVAIAALEVIVE---EKLVERAAKLGEILRDQLNKLQKK-----FPHVVKEV----- 358 (427)
T ss_pred --------c--CC--ChHHH---HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcccc-----ccchhhee-----
Confidence 0 11 11221 334478888876 889999999999999999998432 1221 111
Q ss_pred CCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC
Q 037063 470 FDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL 549 (588)
Q Consensus 470 ~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~ 549 (588)
..||-+.++.+...+-...+.-.+.-.+..+|...-+- .| ..||+++-..
T Consensus 359 RGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkpt-----------------------------H~-~IiRfaPPL~ 408 (427)
T KOG1402|consen 359 RGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPT-----------------------------HG-NIIRFAPPLV 408 (427)
T ss_pred eccceEEEEEeccccccchhHHHHHHcccccccccCCC-----------------------------CC-CeEEecCCcc
Confidence 13454554444322111122223333444455432211 11 1899999999
Q ss_pred CCHHHHHHHHHHHHHhhh
Q 037063 550 TNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 550 ~t~eDv~~li~~l~~~l~ 567 (588)
-+++|++.-+++|.+.+.
T Consensus 409 I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 409 ISEEDLREGIEAIEKTIA 426 (427)
T ss_pred cCHHHHHHHHHHHHHHhc
Confidence 999999999999998764
No 379
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.72 E-value=2.9e-06 Score=86.63 Aligned_cols=342 Identities=15% Similarity=0.124 Sum_probs=196.5
Q ss_pred CCCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|+++.-|||.-|. |-.-+.+.+++..++ ..++ |+.... ..+-+
T Consensus 46 De~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl-~~l~----------------------H~t~~~--------~~~pi 94 (442)
T KOG1404|consen 46 DEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQL-KKLY----------------------HTTSGY--------LNPPI 94 (442)
T ss_pred cCCCceeehhhCCeEEEEcCCCChHHHHHHHHhh-hhhE----------------------Eeeccc--------cCCcH
Confidence 4578889997654 555667777765554 2222 111110 02233
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccC-
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSKKRGARVSSAEFAW- 258 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~- 258 (588)
.+.-+.+++.|=.+- ..+.|++++++|..+++.....-.|. +++ ....||.++...+ ...|.....-+++.
T Consensus 95 ~~~Ae~L~s~~P~~l--~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~----glt~~~~~k~~~~~~ 168 (442)
T KOG1404|consen 95 HDLAEALVSKLPGDL--KVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTL----GLTGLSPWKQNFPGV 168 (442)
T ss_pred HHHHHHHHHhCCCCc--eEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhc----ccccCCcccccCCCC
Confidence 455666666664433 34999999999998877654322233 244 5566665443221 11222211111110
Q ss_pred ---------CC--------C--ccCH----HHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHH
Q 037063 259 ---------PN--------L--RIHS----GKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAE 310 (588)
Q Consensus 259 ---------~~--------~--~i~~----e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~ 310 (588)
|+ . .--. ++++..|. .........++...++-.-|.+.+ ++.+ +.|++
T Consensus 169 ~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~----~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k 244 (442)
T KOG1404|consen 169 ASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLIL----YDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRK 244 (442)
T ss_pred CCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHH----hcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHH
Confidence 00 0 0001 33444444 223345677888888888898876 5557 88999
Q ss_pred cCcEEEEeCCCcC-CCCCCCCCCC--CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCc
Q 037063 311 KGWHVLLDATALG-SKDMDTLGLS--LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSE 387 (588)
Q Consensus 311 ~g~~vvvDaa~~~-~~d~~~l~l~--~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~ 387 (588)
+|.++|.|.+|.. +..-.-+++. ..-||++ +.-|-+|. ..-+|+++..+++.+.+......
T Consensus 245 ~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIv--TmAKgiGn-G~Pl~AVvtt~EIa~v~~~~~~~------------- 308 (442)
T KOG1404|consen 245 RGGLFIADEVQTGFGRTGHMWGFESHGVVPDIV--TMAKGIGN-GFPLGAVVTTPEIADVLNQKSSH------------- 308 (442)
T ss_pred cCCEEEehhhhhccccccccccccccCCCccHH--HHHhhccC-CCcceeeecCHHHHHHHHhcccc-------------
Confidence 9999999999765 2100111222 2236754 56787764 35589999999988776543311
Q ss_pred ccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCC
Q 037063 388 IIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPK 467 (588)
Q Consensus 388 ~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~ 467 (588)
|..-|..++.. ++-.+.|+.+++ +++.++......+|.++|.+++.. -.|+|+-
T Consensus 309 -----------fnTyggnP~a~----avg~aVL~Vike---e~LqE~aa~vG~yl~~~l~~l~d~--------h~iIGdV 362 (442)
T KOG1404|consen 309 -----------FNTYGGNPVAC----AVGLAVLKVIKE---ENLQENAAEVGSYLLEKLAALKDK--------HPIIGDV 362 (442)
T ss_pred -----------ccccCCCchhH----HHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHhhc--------CCceeec
Confidence 00111112222 222355666665 899999999999999999998533 2234431
Q ss_pred CCCCcccEEEEEeecCCCCCcCH-----HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEE
Q 037063 468 VMFDRGPSLAFNVFDWNGTRIDP-----ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVV 542 (588)
Q Consensus 468 ~~~~rg~iv~f~~~~~~g~~i~~-----~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~v 542 (588)
.-+|-++...+.+.+-+...+ ..+-+...+.|+.+.-|.. .|. ++
T Consensus 363 --RG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i---------------------------~G~-vf 412 (442)
T KOG1404|consen 363 --RGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGI---------------------------HGN-VF 412 (442)
T ss_pred --ccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccc---------------------------cce-EE
Confidence 134556666665433122222 2245666778998865522 232 99
Q ss_pred EEecCCCCCHHHHHHHHHHH
Q 037063 543 TAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 543 RvSlg~~~t~eDv~~li~~l 562 (588)
||++-..-|.|||+.+++..
T Consensus 413 riaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 413 RIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred EecCCeeccHHHHHHHHHHH
Confidence 99999999999997777754
No 380
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.72 E-value=5.8e-06 Score=84.35 Aligned_cols=311 Identities=17% Similarity=0.119 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHhC----CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 181 ESKIRKRIMDFMN----ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 181 ~~~~r~~ia~~lg----a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++-+|+.+|+|+. .+.+..+|.+|.|++.|++.++..+--.+.+-|+++..-.. .+.. .+ ...|+..+..-+
T Consensus 115 v~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYP-LYsA--ti-~l~~~~~v~YyL 190 (475)
T KOG0258|consen 115 VPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYP-LYSA--TI-SLLGGTQVPYYL 190 (475)
T ss_pred ChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCc-hhHH--HH-HHhCCcccceee
Confidence 4578999999884 22233359999999999999988773333344765543322 2322 12 334665555545
Q ss_pred cC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCC----------C
Q 037063 257 AW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDAT----------A 321 (588)
Q Consensus 257 ~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa----------~ 321 (588)
+. .++.+|.++|++.+++. .+.-++++.++-++-|+||..+.-+ .| ..|++.|+.++-|.+ .
T Consensus 191 dEe~~W~ld~~el~~~~~eA---~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~sk 267 (475)
T KOG0258|consen 191 DEESNWSLDVAELERSVDEA---RKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSK 267 (475)
T ss_pred ccccCCCCCHHHHHHHHHHH---hccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcc
Confidence 43 45679999999999852 2445788888889999999998754 45 789999999999986 1
Q ss_pred cCC--CCCCCCCCCCCCC-c---EEEeccCc-cCC-CCCCceEEEEEeC---cchhcc--------cCCCCCCCceEeee
Q 037063 322 LGS--KDMDTLGLSLFKP-D---FLICSFYK-IFG-ENPSGFGCLFVKK---SSASVL--------SGSTSSVSTIMGIE 382 (588)
Q Consensus 322 ~~~--~d~~~l~l~~~~~-D---~vv~S~~K-~~G-~~P~G~G~L~v~~---~~~~~l--------~~~~~g~~g~v~~~ 382 (588)
+-. +-+..++ ...+ . +-..|.+| .+| +++. .|.+=+-+ +..+.+ -+...| +...
T Consensus 268 FhSfKKvl~emg--~~~~~~v~L~SfhSvSKGy~gECG~R-GGYmEv~n~~prv~~qi~Kl~si~lc~~V~G---Q~~v- 340 (475)
T KOG0258|consen 268 FHSFKKVLHEMG--NPYPDNVSLASFHSVSKGYMGECGQR-GGYMESLNRDPRVKQQIKKLASIKLCPQVSG---QKLV- 340 (475)
T ss_pred hHhHHHHHHHhc--CccCCceEEEeeecccccceeeeccc-CCeeecccCChhHHHHHHHHHhhhhcCCccc---hhhh-
Confidence 111 0011222 1112 2 22336667 444 2133 35543321 111111 111111 1000
Q ss_pred cCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEE
Q 037063 383 PSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVR 462 (588)
Q Consensus 383 ~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~ 462 (588)
++.-.+. ..|.+++... .. + .+.|...++.-++.+.+.+.++ +++.
T Consensus 341 -------dl~VnPP----~Pgd~Sy~~~---~~---------E--kd~il~~l~~ra~l~~~~~ns~---------~gi~ 386 (475)
T KOG0258|consen 341 -------DLVVNPP----KPGDPSYDLF---SS---------E--KDGILSSLRSRAKLTEDAFNSL---------EGIS 386 (475)
T ss_pred -------ceecCCC----CCCCcchhhh---hh---------h--hHhHHHHHHHHhHHHHHHHhhc---------Ccee
Confidence 0000000 2333333322 11 1 2556666666777888888875 6777
Q ss_pred EeCCCCCCCcccEEEEEeec--------CCCCCcCHHH--HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCC
Q 037063 463 IYGPKVMFDRGPSLAFNVFD--------WNGTRIDPAL--VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGT 532 (588)
Q Consensus 463 i~~p~~~~~rg~iv~f~~~~--------~~g~~i~~~~--v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~ 532 (588)
... .+|.+..|.-.. .+-..+.|+. ..++|+.-||++-+|+- +. .
T Consensus 387 cn~-----~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSG----FG------------Q---- 441 (475)
T KOG0258|consen 387 CNP-----VQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSG----FG------------Q---- 441 (475)
T ss_pred ecc-----CccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCC----CC------------C----
Confidence 654 467888874211 0111144554 36889999999988731 11 1
Q ss_pred CCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 533 NETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 533 ~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
..|.-.+|.++=.-. .+=|+++-+|=++|+++
T Consensus 442 ---~~GtyH~R~TiLp~~-~~~i~~~~~fH~~f~~~ 473 (475)
T KOG0258|consen 442 ---KEGTYHFRTTILPPG-LEIIEKFKKFHAEFMDE 473 (475)
T ss_pred ---CCceeEEEEeecCch-hHHHHHHHHHHHHHHHh
Confidence 134348999875444 37788888887777764
No 381
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.69 E-value=3.4e-07 Score=94.10 Aligned_cols=174 Identities=15% Similarity=0.142 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHh-----CC--CCCCC-----eEE-EcCC-CchhHHHHHHHHHHh
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAES-----YP--FYSNP-----RLL-TVYD-HENEAAALMIESSKK 246 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s-----~~--~~~gd-----~ll-~~~e-~~s~~~~~~~~~a~~ 246 (588)
+.++-.++-+..|-+++ -+-||++|++-+.-.+... +| -..|- -|+ ++.+ |+| + ...|..
T Consensus 143 E~~vl~km~~ivGw~~~-~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYS--i---~kaAa~ 216 (510)
T KOG0629|consen 143 EEEVLAKMREIVGWEEG-GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYS--I---KKAAAF 216 (510)
T ss_pred hHHHHHHHHHHhCCCCC-CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhh--H---HHHHHH
Confidence 44566666777888764 2378888776443222221 11 01121 133 4444 433 2 444555
Q ss_pred cC---CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCc
Q 037063 247 RG---ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATAL 322 (588)
Q Consensus 247 ~G---~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~ 322 (588)
.| -.++.|+.+ +.|.+.+++|++.|.+. +.+...+-+|..++.+++.|+.-|++.| ++|++|+.+++||||-.
T Consensus 217 lg~gtd~c~~v~t~-e~Gkm~~~dLe~kile~--k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwG 293 (510)
T KOG0629|consen 217 LGLGTDHCIKVKTD-ERGKMIPDDLEKKILEA--KAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWG 293 (510)
T ss_pred hccCCceeEEeccc-ccCccchHHHHHHHHHH--HhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccc
Confidence 56 688888888 88999999999999742 1222347899999999999999999999 99999999999999954
Q ss_pred CCCCC---CCCCCC-CCCCcEEEeccCccCCCCCCceEEEEEeCcc
Q 037063 323 GSKDM---DTLGLS-LFKPDFLICSFYKIFGENPSGFGCLFVKKSS 364 (588)
Q Consensus 323 ~~~d~---~~l~l~-~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~ 364 (588)
.+.-+ ...-++ ..++|.+..+.||+.|. |.-+++++.|.+-
T Consensus 294 GglLmS~k~R~kl~Giera~SvtwnpHK~~ga-plqCsa~l~r~~g 338 (510)
T KOG0629|consen 294 GGLLMSRKHRHKLTGIERANSVTWNPHKLMGA-PLQCSAFLTREEG 338 (510)
T ss_pred cccccChhhHhhccCccccCceeecHHHhhcC-cchhhHHHHHHHH
Confidence 43101 111122 34589999999999997 8889998888753
No 382
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.67 E-value=2.6e-06 Score=86.87 Aligned_cols=309 Identities=15% Similarity=0.093 Sum_probs=176.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccC
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAW 258 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~ 258 (588)
++.-+..++||+|+|+. ..|++..|.+. +.-++-+| -+.||-+..+....=.+..++ ++. .-.+.+...
T Consensus 139 DvHldlE~~iakF~G~E---~aivYs~gF~t-i~S~ipaf-sKrGDIi~~de~~nfaIq~Gl-qlS---RS~i~~Fkh-- 207 (467)
T KOG1358|consen 139 DVHLDLEKRIAKFMGTE---DAIVYSYGFST-IESAIPAF-SKRGDIIFVDEAVNFAIQKGL-QLS---RSTISYFKH-- 207 (467)
T ss_pred eeecccHHHHHHhhCCc---ceeeeccccch-hhhcchhh-hccCcEEEEehhhhHHHHHHH-hhh---hheeEEecC--
Confidence 34457889999999994 24777777654 35555666 577887665433221133332 222 223444433
Q ss_pred CCCccCHHHHHHHHhhhc-cccCCC---c-ceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC-------
Q 037063 259 PNLRIHSGKLMKKIVGKR-KKKKKK---K-RGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK------- 325 (588)
Q Consensus 259 ~~~~i~~e~l~~~i~~~~-~~~~~~---~-t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~------- 325 (588)
.|++++++.+.+.- +..+.+ . .+.+++....-.+|.+.|+.+| ++..++...|++|..-+.|.
T Consensus 208 ----ndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrG 283 (467)
T KOG1358|consen 208 ----NDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRG 283 (467)
T ss_pred ----CCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCcc
Confidence 37788888876411 111112 2 5678888889999999999999 99999999999999844431
Q ss_pred CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 326 DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 326 d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
-.+..+.+...+|.+++|.--.++. |.|+... +..+-..+.. .| .|. .| -..+|
T Consensus 284 vteH~~v~~~~iDiv~~sm~~alas---~GgFc~G-~~~i~~hQrL-Sg-~~Y-------------------~f-SAslP 337 (467)
T KOG1358|consen 284 VTEHFGVPITDIDIVTASMETALAS---GGGFCAG-KSFIADHQRL-SG-SGY-------------------CF-SASLP 337 (467)
T ss_pred ccccCCCCccceeeeeecccccccc---cCceeec-ceeeEeeeec-cc-cce-------------------ee-eccCc
Confidence 0233444445589999998876662 4466666 3333212222 12 011 12 12234
Q ss_pred CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCC
Q 037063 406 SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNG 485 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g 485 (588)
++.. .+...+++..++- ..+-+-++.....+...|+. ..++.+.+. .-+|++-+.+....|
T Consensus 338 p~la----~aa~~ai~i~~~~--p~~~~~L~~k~~~~H~~l~~---------~s~~~v~~~----~~SPi~hl~l~~~~~ 398 (467)
T KOG1358|consen 338 PYLA----GAAIKAILIEEWN--PEIVQPLRAKVAKFHAALSS---------NSGFIVSGS----PESPIIHLQLERSYG 398 (467)
T ss_pred hhhh----hhHHHHHHHHhhC--cchhhhhhccccccchhhhc---------CCceEEecC----cCCceeeeeeccccc
Confidence 4433 2223455544442 22444455555566666665 345777664 346787777766443
Q ss_pred CCcC-----HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 486 TRID-----PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 486 ~~i~-----~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
..-. -+.+.+.+.+ |+.+-. +..+... ....-.+.|||.+....++||++++.+
T Consensus 399 s~e~e~~lL~eivd~~i~~-~~ll~~----------------a~~~~~~----e~~~~~pSiri~~~a~~seeel~ra~~ 457 (467)
T KOG1358|consen 399 SREKEEKLLEEIVDKCIAE-GVLLTR----------------AKYLEKL----ERCPIPPSIRICVSAGMSEEELERAAE 457 (467)
T ss_pred chHHHHHHHHHHHHHHHhh-cceehh----------------hhhhhhc----ccCCCCCcEEEEEeCCCCHHHHHHHHH
Confidence 2211 1123333333 554421 1111111 000112389999999999999999999
Q ss_pred HHHHhhhh
Q 037063 561 FVSRFLDA 568 (588)
Q Consensus 561 ~l~~~l~~ 568 (588)
.|++...+
T Consensus 458 ~ik~~~~~ 465 (467)
T KOG1358|consen 458 LIKEVASA 465 (467)
T ss_pred HHHHHHHh
Confidence 99986543
No 383
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.58 E-value=2.6e-06 Score=89.38 Aligned_cols=268 Identities=12% Similarity=0.092 Sum_probs=151.6
Q ss_pred CCCCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|.++..|+|..+ .|--.+.+.+++.+.+....+.++ . . ...+..
T Consensus 12 d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~------------------------~-~-----~~~~~~ 61 (339)
T PF00202_consen 12 DVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSF------------------------S-G-----FTHPEA 61 (339)
T ss_dssp ETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCST------------------------T-T-----SEEHHH
T ss_pred ECCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccc------------------------c-c-----eeccch
Confidence 346888999863 355667777777655432111110 0 0 014556
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC------CCCCCe-EE-EcCCCchhHHHHHH-----HHHHhc-
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP------FYSNPR-LL-TVYDHENEAAALMI-----ESSKKR- 247 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~------~~~gd~-ll-~~~e~~s~~~~~~~-----~~a~~~- 247 (588)
.++-+++.+.++- .-+.|.|+.++++|+..++.... ..++.. |+ ....||......+. ...+..
T Consensus 62 ~~la~~L~~~~p~--~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~ 139 (339)
T PF00202_consen 62 AELAEKLAELFPG--GLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFG 139 (339)
T ss_dssp HHHHHHHHHHSST--TEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTC
T ss_pred hhhhhhhhhcccc--ccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCcccccccc
Confidence 6888888888833 22469999999999988777552 234443 55 55667653322211 011111
Q ss_pred --CCEEEEEeccCCCC----ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEE
Q 037063 248 --GARVSSAEFAWPNL----RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVL 316 (588)
Q Consensus 248 --G~~v~~v~~~~~~~----~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vv 316 (588)
...+..+|.+.... .-..+++++.+.+ ...++...|++.-+....|.+.+ ++.| ++|+++|+++|
T Consensus 140 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI 215 (339)
T PF00202_consen 140 PLYPGVVFVPFPDPAADEEEQACLNALEELIAA----LNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLI 215 (339)
T ss_dssp SSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHH----HHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEE
T ss_pred ccccccccccCCccchhhhHHHHHHHHHHHHHh----hcCCcEEEEEEeccccccCccccccchhhehccccccccccee
Confidence 12456666641100 0011223333331 11256788888888877887765 4557 89999999999
Q ss_pred EeCCCcC-C---C--CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccc
Q 037063 317 LDATALG-S---K--DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIE 390 (588)
Q Consensus 317 vDaa~~~-~---~--d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~ 390 (588)
+|.++.. + . -....+ ..||+++++ |.++.+ .-+|++++++++.+.+.+...+
T Consensus 216 ~DEV~tG~gRtG~~~a~~~~g---v~PDiv~~g--K~l~gG-~p~sav~~~~~i~~~~~~~~~~---------------- 273 (339)
T PF00202_consen 216 ADEVQTGFGRTGKFFASEHYG---VDPDIVTFG--KGLGGG-LPISAVLGSEEIMEAFQPGSHG---------------- 273 (339)
T ss_dssp EEETTTTTTTTSSSSGHHHHT---SSSSEEEEE--GGGGTT-SSEEEEEEEHHHHTTSCTTSST----------------
T ss_pred cccccccccccCCccceeccc---ccCcccccc--cchhhh-hhcccccccchhhccccccccc----------------
Confidence 9999764 2 1 012223 349999987 966532 5589999999987766443322
Q ss_pred cccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcc
Q 037063 391 LETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNL 449 (588)
Q Consensus 391 ~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L 449 (588)
+|..-..+ ..++..+.|+.+++ +++.++++.+.+++.+.|.+|
T Consensus 274 ------------~T~~g~p~-~~aaa~~~l~~~~~---~~~~~~~~~~g~~l~~~L~~l 316 (339)
T PF00202_consen 274 ------------STFGGNPL-SCAAALATLEILEE---EDLLERVRELGERLREGLREL 316 (339)
T ss_dssp ------------CTTTT-HH-HHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHH
T ss_pred ------------cccccchH-hhhhhhhHHHhhcc---HHHHHHHHHHHHHHHHHHHHH
Confidence 11111111 12344466666665 446677777777777777765
No 384
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.57 E-value=6.4e-05 Score=86.79 Aligned_cols=214 Identities=16% Similarity=0.094 Sum_probs=127.4
Q ss_pred CcceEEEEeCC-CCCCCccCC----HHHH-HHHHHcCcEEEEeCCCcC-C---C--CCCCCCCCCCCCcEEEeccCccCC
Q 037063 282 KKRGLFVFPLQ-SKVTGARYS----YMWM-SVAAEKGWHVLLDATALG-S---K--DMDTLGLSLFKPDFLICSFYKIFG 349 (588)
Q Consensus 282 ~~t~Lv~~~~~-sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~~-~---~--d~~~l~l~~~~~D~vv~S~~K~~G 349 (588)
++...|++.-+ ...-|.+.| ++.| ++|+++|+++|+|.++.. + . -.+.+| ..||++++ -|.++
T Consensus 583 ~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~g---v~PDIi~~--gKgLt 657 (817)
T PLN02974 583 GHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLG---CKPDIACY--AKLLT 657 (817)
T ss_pred CCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcC---CCCCEEee--ccccc
Confidence 45677777663 666788876 4447 899999999999998554 2 1 122333 34998875 48655
Q ss_pred CCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhC-H
Q 037063 350 ENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALG-L 428 (588)
Q Consensus 350 ~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G-~ 428 (588)
.+=.-+|++++++++.+.+...... + .|-..+|..-..+ ..++..+.|+.+++.+ .
T Consensus 658 gG~~Plaa~l~~~~I~~~f~~~~~~--~--------------------~~~hg~Ty~gnpl-~cAaala~L~~~~~~~~~ 714 (817)
T PLN02974 658 GGLVPLAATLATEEVFEAFRGPSKL--D--------------------ALLHGHSYTAHPM-GCAAAAKALQWYKDPSTN 714 (817)
T ss_pred CCCCccEEEEEcHHHHHhhcccccc--C--------------------CcccCCCCCcCHH-HHHHHHHHHHHHHcccHH
Confidence 2112379999999987765311000 0 0001122222222 1244446677776643 3
Q ss_pred HHHHHHHHHHHHHHHHHH-Hccc-CCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCC-CCcC---HHHHHHHHH-hCC
Q 037063 429 ILISNRARYLINWLANAL-MNLH-HPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNG-TRID---PALVQKLAD-RHN 501 (588)
Q Consensus 429 ~~i~~r~~~L~~~l~~~L-~~L~-h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g-~~i~---~~~v~~~l~-~~g 501 (588)
+++.++...+..++.+.| ..+. |+. +..|+ ..|-++++.+.+..+ +... ...+.+.+. ++|
T Consensus 715 ~~l~~~~~~l~~~l~~~l~~~l~~~p~----V~~VR--------g~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~G 782 (817)
T PLN02974 715 PNLIPPGSRLRELWDEELVRAISSLPN----VERVV--------SLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDG 782 (817)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCC----eeEEE--------eeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCC
Confidence 466677777777666666 2221 221 11222 346778887764322 1111 234555555 899
Q ss_pred cEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 502 ISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 502 I~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
|.++.. | .+||+.+.+.++.||++++++.|.+-|
T Consensus 783 l~~r~~------------------------------G-nvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 783 IYARPL------------------------------G-NVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EEEEec------------------------------C-CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 998752 1 189999999999999999999988755
No 385
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.49 E-value=8.4e-07 Score=89.77 Aligned_cols=159 Identities=15% Similarity=0.110 Sum_probs=87.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC--CCC---eEEEcCCCchhHHHHHHHHHHhcCCEEE
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY--SNP---RLLTVYDHENEAAALMIESSKKRGARVS 252 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~--~gd---~ll~~~e~~s~~~~~~~~~a~~~G~~v~ 252 (588)
.++.+.+|+.=...=|+-.+++-|||..|+|+.++.++.++.-. +.. +|+...+|.+ ++....++.+. ....
T Consensus 46 ~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~-~Y~~qt~~f~s--~~y~ 122 (363)
T PF04864_consen 46 PELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYS-SYPEQTDFFDS--RLYK 122 (363)
T ss_dssp HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--C-HHHHHCCCT-B--TTEE
T ss_pred HHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCcc-chHHHHHhccc--cCcc
Confidence 55655565555555567777788999999999999999887422 222 2888888877 44332222221 1122
Q ss_pred EEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHHHcCcEEEEeCC----CcCCCCCC
Q 037063 253 SAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAAEKGWHVLLDAT----ALGSKDMD 328 (588)
Q Consensus 253 ~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~~g~~vvvDaa----~~~~~d~~ 328 (588)
+..-. .... + .....+-+=.++.++||.|.+-- ..++..+..+|.|-| |+.|+ ..
T Consensus 123 w~Gda--------~~~~---~-----~~~~~~~IElVTSPNNPDG~lr~----~V~~g~~~k~I~D~AYYWPhyTpI-~~ 181 (363)
T PF04864_consen 123 WAGDA--------SNFK---N-----SDNPSPYIELVTSPNNPDGQLRE----AVLNGSSGKVIHDLAYYWPHYTPI-TA 181 (363)
T ss_dssp EEEEC--------CCGT---T------S-CCGEEEEEESS-TTT----------SSTTTEEEEEEE-TT-STTTS----S
T ss_pred ccccH--------Hhhc---c-----CCCCCCeEEEEeCCCCCcccccc----hhcCCCCcceeeeeeeeccccccc-CC
Confidence 22110 0111 1 01145667788999999998642 234555677899999 55554 23
Q ss_pred CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcch
Q 037063 329 TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSA 365 (588)
Q Consensus 329 ~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~ 365 (588)
+.| -|++.+++.|+-|.+.+++|+.+||++.+
T Consensus 182 ~aD-----~DiMLFT~SK~TGHAGSR~GWAlVKD~~V 213 (363)
T PF04864_consen 182 PAD-----HDIMLFTLSKLTGHAGSRFGWALVKDEEV 213 (363)
T ss_dssp -B-------SEEEEEHHHHCS-GGG-EEEEEES-HHH
T ss_pred CCC-----CceEEEEEecccCccccccceeeecCHHH
Confidence 455 69999999999997778899999998754
No 386
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.37 E-value=6.9e-05 Score=80.81 Aligned_cols=300 Identities=17% Similarity=0.155 Sum_probs=179.1
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHH----HHHHHHHhCCCCCCCe---E--EEcCCCchhHHHHHHHHHHhcC
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSS----AFKLLAESYPFYSNPR---L--LTVYDHENEAAALMIESSKKRG 248 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~----al~lv~~s~~~~~gd~---l--l~~~e~~s~~~~~~~~~a~~~G 248 (588)
.++..++.+.+.++-|-| .+.|.+|+-+ +=-.++++|-...|+. | +...-|..|- ..|...|
T Consensus 581 ~~lf~~Le~~Lc~iTG~D----~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNP-----ASA~Mag 651 (1001)
T KOG2040|consen 581 QQLFTELEKDLCEITGFD----SFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNP-----ASAAMAG 651 (1001)
T ss_pred HHHHHHHHHHhheeeccc----ceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCCh-----hhHHhcC
Confidence 577788888888888874 3788876532 2234556664444442 3 3333343321 1234569
Q ss_pred CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccC-CHHHH-HHHHHcCcEEEEeCC---CcC
Q 037063 249 ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARY-SYMWM-SVAAEKGWHVLLDAT---ALG 323 (588)
Q Consensus 249 ~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~-pl~~I-~~a~~~g~~vvvDaa---~~~ 323 (588)
.+|+.|.++ .+|.||..+|+++.++ ..++-..+.++.+|+ .|+.- .++++ .+.|++|-.|.+|+| +-+
T Consensus 652 mkvvpV~~~-~~G~id~~dLk~kaek-----h~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqV 724 (1001)
T KOG2040|consen 652 MKVVPVGCD-ANGNIDMVDLKAKAEK-----HKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQV 724 (1001)
T ss_pred CEEEEeecc-CCCCccHHHHHHHHHH-----hhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCcccee
Confidence 999999998 8899999999998873 114455666666665 56664 58888 999999999999998 333
Q ss_pred CC-CCCCCCCCCCCCcEEEeccCccCCC----CCCceEEEEEeCcchhcccCC--CC----CC---CceEeeecCCCccc
Q 037063 324 SK-DMDTLGLSLFKPDFLICSFYKIFGE----NPSGFGCLFVKKSSASVLSGS--TS----SV---STIMGIEPSFSEII 389 (588)
Q Consensus 324 ~~-d~~~l~l~~~~~D~vv~S~~K~~G~----~P~G~G~L~v~~~~~~~l~~~--~~----g~---~g~v~~~~~~~~~~ 389 (588)
+. ...++| .|+.-...||-|.. +..|+|-+-||+-+..-|+.. .. ++ .|.|+..+
T Consensus 725 Glc~pGd~G-----aDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP------ 793 (1001)
T KOG2040|consen 725 GLCRPGDIG-----ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAP------ 793 (1001)
T ss_pred cccCCcccc-----ccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccC------
Confidence 41 234444 89999999996543 234677888888776655421 11 00 12222111
Q ss_pred ccccccccccccCCCCCccchhhHHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCC
Q 037063 390 ELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL---GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGP 466 (588)
Q Consensus 390 ~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~---G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p 466 (588)
.|+..+.. ....+++.+ |+..-.+-..-.++|+.++|..- .+ + +|..
T Consensus 794 ------------~Gsa~ILp--------ISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--------Yk-i-l~~~ 843 (1001)
T KOG2040|consen 794 ------------WGSALILP--------ISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--------YK-I-LFRG 843 (1001)
T ss_pred ------------CCcceeeh--------hHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--------cc-e-eEec
Confidence 12222222 233344444 45555555555678999998872 11 1 2221
Q ss_pred CCCCCcccEEE--EEe--ecCCC-CCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccE
Q 037063 467 KVMFDRGPSLA--FNV--FDWNG-TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSV 541 (588)
Q Consensus 467 ~~~~~rg~iv~--f~~--~~~~g-~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~ 541 (588)
.++ .++ |.+ .+.+. ..|.+.+|.+.|..+|.+.-+=+. | + .| .
T Consensus 844 ----~~~-~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTmsw--P-------------V----------~g--t 891 (1001)
T KOG2040|consen 844 ----ENG-LVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSW--P-------------V----------AG--T 891 (1001)
T ss_pred ----CCc-ceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCcccc--c-------------c----------CC--c
Confidence 111 333 222 12111 237788899999999886433111 0 0 11 4
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 542 VTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 542 vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
+=|-+---.+.+|+|||++++-.+.
T Consensus 892 LMIEPTESE~k~ElDRfcdAliSIr 916 (1001)
T KOG2040|consen 892 LMIEPTESEDKAELDRFCDALISIR 916 (1001)
T ss_pred eEeccCccccHHHHHHHHHHHHHHH
Confidence 5555555567899999999987654
No 387
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.34 E-value=1.8e-05 Score=82.28 Aligned_cols=315 Identities=12% Similarity=0.026 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEecCHH-HHHHHHHHhCCCCCC-CeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 180 LESKIRKRIMDFMNISEDDYTLVFTANQS-SAFKLLAESYPFYSN-PRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 180 ~~~~~r~~ia~~lga~~~e~~vvft~g~T-~al~lv~~s~~~~~g-d~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
+-..+-..+.+.+|+..- ...+.++-+| .++.+++.++.-++. +.|+ ...+|.+ .+. .+...|.+++.|+.
T Consensus 57 ltn~l~~d~~~~~G~~~~-~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkS-c~k----ai~~AGl~~~vV~~ 130 (389)
T PF05889_consen 57 LTNSLVLDALRLAGLRSV-KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKS-CFK----AIERAGLEPVVVEN 130 (389)
T ss_dssp HHHHHHHHHHHHTTHTTH-CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHH-HHH----HHHHTT-EEEEE-E
T ss_pred HHHHHHHHHHHHcCCccc-cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccc-hHH----HHHhcCCeEEEeec
Confidence 334444455667788633 3466666666 456666666532343 4455 5667776 332 33556999999885
Q ss_pred c--CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC-HHHH-HHHHHcCcEEEEeCCCcCC--CCCCCC
Q 037063 257 A--WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS-YMWM-SVAAEKGWHVLLDATALGS--KDMDTL 330 (588)
Q Consensus 257 ~--~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p-l~~I-~~a~~~g~~vvvDaa~~~~--~d~~~l 330 (588)
. .+....|.+.+++.+++ ..+...|.++++.+-+.|...| +++| ++|+++|++.++..|-.+- .-+..+
T Consensus 131 ~~~~d~l~td~~~ie~~i~~-----~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i 205 (389)
T PF05889_consen 131 VLEGDELITDLEAIEAKIEE-----LGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLI 205 (389)
T ss_dssp EEETTEEEEHHHHHHHHHHH-----HCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHH
T ss_pred cCCCCeeeccHHHHHHHHHH-----hCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHH
Confidence 2 23345677888888863 1256799999999999999999 9999 9999999999999996661 000000
Q ss_pred C--CCCCCCcEEEeccCccCCCCCCceEEEEEeCc-chhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCc
Q 037063 331 G--LSLFKPDFLICSFYKIFGENPSGFGCLFVKKS-SASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSI 407 (588)
Q Consensus 331 ~--l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~-~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~ 407 (588)
. ...-++|+++-|.-|=|-. |.|-+.+....+ .+..+...|.|. . + .|+
T Consensus 206 ~~a~~~GRvda~vqS~dkNF~V-PvGgai~As~~~~~i~~vs~~YpGR---a-------------------s---~sp-- 257 (389)
T PF05889_consen 206 QQAWRVGRVDAFVQSTDKNFMV-PVGGAIMASFDPSGILAVSKEYPGR---A-------------------S---ASP-- 257 (389)
T ss_dssp HHHHHHSTCSEEEEEHHHHHCE-ESSHEEEEESSHHHHHHHHHTSHSH---B-------------------T---SHH--
T ss_pred HHHHhcCCcceeeeecCCCEEe-cCCCcEEEecCHHHHHHHHHHhhhh---h-------------------h---ccc--
Confidence 0 0001367778888883333 667666665543 344444333321 0 0 011
Q ss_pred cchhhHHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc-EEEEEeecC
Q 037063 408 SGVSSKLVECKGLDHADAL---GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP-SLAFNVFDW 483 (588)
Q Consensus 408 ~~~~~~~al~~aL~~l~~~---G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~-iv~f~~~~~ 483 (588)
....+..+..+ |+........++-.++.++|+++--.. +-++ +.. ++.+ .++|.+...
T Consensus 258 --------~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~------~e~l-l~~---p~N~is~a~tl~~l 319 (389)
T PF05889_consen 258 --------SLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEV------GERL-LET---PRNHISMAFTLDTL 319 (389)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TEEB-SSS---TT-SSEEEEE-TTC
T ss_pred --------chHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh------hhhh-cCC---CCCCeeEEEECccc
Confidence 01122222333 355566666667777777777642111 1222 221 1222 344555432
Q ss_pred CCCC-cCHHHHHHHHHhCCcE-eccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHH
Q 037063 484 NGTR-IDPALVQKLADRHNIS-LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAF 561 (588)
Q Consensus 484 ~g~~-i~~~~v~~~l~~~gI~-v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~ 561 (588)
.... -+...+...|..+||. .| |-... +....+ .....-.+++.+.-.+-.+.||||.+++.
T Consensus 320 ~~~~~k~~~~lgs~Lf~R~VsG~R-vV~~~-~~~~ts--------------h~~~yp~~Ylt~AsaiG~~~eevd~~v~r 383 (389)
T PF05889_consen 320 YEISQKDGTFLGSMLFKRGVSGIR-VVTPG-GKKQTS--------------HSSNYPCPYLTAASAIGMTREEVDYFVKR 383 (389)
T ss_dssp CTCCSSHHHHHHHHHHHTTEESSE-EEETS-SCEEET--------------TSS--SSSEEEEEE-TT--HHHHHHHHHH
T ss_pred hhhccchhhhHHHHHHhCCcccce-eeccC-CCcccc--------------cCCCCchHHHHHHHHhCCCHHHHHHHHHH
Confidence 1100 1235677788888875 12 10000 000000 00001123888876777899999999999
Q ss_pred HHHhhh
Q 037063 562 VSRFLD 567 (588)
Q Consensus 562 l~~~l~ 567 (588)
|++.++
T Consensus 384 L~k~i~ 389 (389)
T PF05889_consen 384 LDKIIK 389 (389)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 998764
No 388
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.14 E-value=1.9e-05 Score=84.96 Aligned_cols=300 Identities=16% Similarity=0.156 Sum_probs=167.3
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
+-.-+..|+++-|.+-.. .-+---+|+|-..++.++...++.+++++...|.+...-++-.++..|+++...+.
T Consensus 165 llNyQTmi~dlTGL~~aN--ASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~~---- 238 (1001)
T KOG2040|consen 165 LLNYQTMITDLTGLPMAN--ASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSDI---- 238 (1001)
T ss_pred HhhhHHhhhhccCCcccc--hhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEecCH----
Confidence 335667788888876543 34444556666666666656666776665554444444444444555666444332
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC----CCCCCCCCCCC
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS----KDMDTLGLSLF 335 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~----~d~~~l~l~~~ 335 (588)
++...-. +...-+.+..+ ...|.+.|.+++ +.+++.|.++++- +.++. .....+|
T Consensus 239 -----~~~~~s~---------~~v~gvlvQYP-~t~G~i~d~~el~~~a~~~~s~vv~a-tDLLaLtiLrpPgefG---- 298 (1001)
T KOG2040|consen 239 -----KEADYSS---------KDVSGVLVQYP-DTEGSVLDFDELVELAHANGSLVVMA-TDLLALTILRPPGEFG---- 298 (1001)
T ss_pred -----HHhhccc---------cceeEEEEEcC-CCCCcccCHHHHHHHhhccCceEEEe-ehhhHHHccCChhhcC----
Confidence 2211111 22322333322 348999999999 9999999886653 33332 1134455
Q ss_pred CCcEEEeccCccCCCCCCc-----eEEEEEeCcchhcccCCCCCCCceEeeecCCCcc-cccccccc-cccccCCCCCcc
Q 037063 336 KPDFLICSFYKIFGENPSG-----FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEI-IELETLDE-SSQSKFPESSIS 408 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G-----~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~-~~~~~~~~-~~f~e~GT~~~~ 408 (588)
+|+.++|.+. ||. |.| .||+.+++++...++-... |........... .-++.+.. -+- +-.|.|+.
T Consensus 299 -aDIavGSsQR-FGV-PlGYGGPHAaFfAv~~~l~R~mPGRii---GvtkD~~gk~a~RLALQTREQHIrR-DKATSNIC 371 (1001)
T KOG2040|consen 299 -ADIAVGSSQR-FGV-PLGYGGPHAAFFAVSESLVRMMPGRII---GVTKDALGKEAYRLALQTREQHIRR-DKATSNIC 371 (1001)
T ss_pred -ceeeeccccc-cCc-cccCCCchHHHHHHHHHHHhhCCCceE---eeeecccccHHHHHHHHHHHHHhhh-hccchhhh
Confidence 9999999998 554 444 5667777665544443332 222111100000 00111110 011 45688876
Q ss_pred chhhHHHHHHHHH--HHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCC
Q 037063 409 GVSSKLVECKGLD--HADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGT 486 (588)
Q Consensus 409 ~~~~~~al~~aL~--~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~ 486 (588)
...++.|-..|.- +.-.-|++.|.+|+..++..|..+|+...| ++... . -=-.+.+.+..
T Consensus 372 TAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~agh----------el~~k-~---fFDTLkI~~~~---- 433 (1001)
T KOG2040|consen 372 TAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGH----------ELQHK-P---FFDTLKIRCGC---- 433 (1001)
T ss_pred HHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcch----------hhccc-c---ccceEEEEecC----
Confidence 6432222222221 112237999999999999999999997532 12111 0 00122333332
Q ss_pred CcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 487 RIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 487 ~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
+.+++...+.+++|-+|.- . .+ .|-+|+--..+.+||+.++..+.
T Consensus 434 --s~~~~l~rA~~~~iNlr~~-------------------e---------d~--tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 434 --SAEEVLDRAAKRQINLRLV-------------------E---------DG--TIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred --cHHHHHHHHHhhcCceEEe-------------------e---------cC--ceEEeecccccHHHHHHHHHHHc
Confidence 3666666666677877642 1 33 78899999999999999988765
No 389
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.04 E-value=0.0029 Score=64.49 Aligned_cols=313 Identities=14% Similarity=0.096 Sum_probs=167.6
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC-----CCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY-----SNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~-----~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.+++.+.+.||.+ | ++-|.-+-.|=+++...+ ++ ||.+.+ .+.-|+- .- +.-.+..|+.++.+++
T Consensus 83 ~L~~avkdifGfq---~-~iPthQGRgAE~Il~~i~-ik~~~~~pg~~~~~~sN~~Fd-TT---r~h~~~ng~~~~n~~~ 153 (471)
T COG3033 83 ALADAVKDIFGFQ---Y-TIPTHQGRGAENILIPIL-IKKGEQEPGSKMVAFSNYHFD-TT---RGHIQINGATPRNVYV 153 (471)
T ss_pred HHHHHHHHhcCce---e-eeeccCCccHHHHHHHHH-hhhccccCCccccccccceec-ch---hHHHHhcCCccccccc
Confidence 5667777788863 3 666777667766666555 44 454433 3333332 11 2333567888877766
Q ss_pred cCC---------CCccCHHHHHHHHhhhccccCCCcceEEEEeCC-CCCCCccCCHHH---H-HHHHHcCcEEEEeCCCc
Q 037063 257 AWP---------NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQ-SKVTGARYSYMW---M-SVAAEKGWHVLLDATAL 322 (588)
Q Consensus 257 ~~~---------~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~-sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~ 322 (588)
+.. .|.+|.+.|+++|++ ...++.-.|+++-. ++.-|+-.+++- + ++|++++++|+.|++-+
T Consensus 154 ~ea~d~~~~~pFKGd~D~~kLe~lide----vG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~Rf 229 (471)
T COG3033 154 DEAFDTEVKYPFKGNFDLEKLERLIDE----VGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARF 229 (471)
T ss_pred cccccccccCCCCCccCHHHHHHHHHH----hCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhh
Confidence 521 267899999999984 22244445554444 444666666555 5 88999999999999843
Q ss_pred CC----CCCCCCCCCC-----------CCCcEEEeccCc-cCCCCCCceEEEEEeCcch----hcccCCCCCCCceEeee
Q 037063 323 GS----KDMDTLGLSL-----------FKPDFLICSFYK-IFGENPSGFGCLFVKKSSA----SVLSGSTSSVSTIMGIE 382 (588)
Q Consensus 323 ~~----~d~~~l~l~~-----------~~~D~vv~S~~K-~~G~~P~G~G~L~v~~~~~----~~l~~~~~g~~g~v~~~ 382 (588)
+- +....-+... ..+|-++.|.-| .+- +.| |+|..+++.. ..++.... +
T Consensus 230 aENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lv--nmG-Gfl~~~D~~~fDvy~~~~~~~V-----~--- 298 (471)
T COG3033 230 AENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLV--NMG-GFLCFKDDSFFDVYEECRTLVV-----V--- 298 (471)
T ss_pred hhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeecccccee--ccc-cEEEecCccHHHHHHHHHhheE-----e---
Confidence 31 1122222221 237889999999 443 444 8888888732 22222110 0
Q ss_pred cCCCcccccccccccccccCCCCCccch--hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCe
Q 037063 383 PSFSEIIELETLDESSQSKFPESSISGV--SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPL 460 (588)
Q Consensus 383 ~~~~~~~~~~~~~~~~f~e~GT~~~~~~--~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~ 460 (588)
.-|-+.+-+. .++.++..+|..- ...+-+..|+.+ .+||.++|.+. |
T Consensus 299 ------------------~eG~~tYGgl~GrdmealAvGL~e~--~~~~yl~~Rv~Q-v~YL~~~l~~~-------G--- 347 (471)
T COG3033 299 ------------------QEGFPTYGGLAGRDMEALAVGLREG--VNFDYLAHRVAQ-VQYLADGLEEA-------G--- 347 (471)
T ss_pred ------------------eccccccCcccchhHHHHHHHHHHh--cCcHHHHHHHHH-HHHHHHHHHhc-------C---
Confidence 0011111111 1234555555432 223555555544 57888999885 4
Q ss_pred EEEeCCCCCCCcccEEEEEe----ecCCCCCcCHHHH-HHHHHhCCcEe-ccccccCcccccchHHHHHHHHhhhcCCCC
Q 037063 461 VRIYGPKVMFDRGPSLAFNV----FDWNGTRIDPALV-QKLADRHNISL-SCGFLQNIFFSGEYEQERVRVLETRSGTNE 534 (588)
Q Consensus 461 v~i~~p~~~~~rg~iv~f~~----~~~~g~~i~~~~v-~~~l~~~gI~v-~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~ 534 (588)
|.|+.|. .|..+-++. +.-.-+.+..+.+ ..+..+.||.. ..|.+.-... ... +.
T Consensus 348 Vpi~~pa----GGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd-----------~kt----g~ 408 (471)
T COG3033 348 VPIVQPA----GGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRD-----------PKT----GK 408 (471)
T ss_pred CeeEecC----CCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccC-----------CCc----cc
Confidence 4455442 233333321 1111122333333 45567788863 3343221000 000 00
Q ss_pred C-cCCccEEEEecC-CCCCHHHHHHHHHHHHHhhhhh
Q 037063 535 T-RSGVSVVTAALG-CLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 535 ~-~~g~~~vRvSlg-~~~t~eDv~~li~~l~~~l~~~ 569 (588)
. ..-...||+.+- -.=|.+.+|.+++.++++.+..
T Consensus 409 q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~ 445 (471)
T COG3033 409 QHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENA 445 (471)
T ss_pred cCCCchheeeEeccccccchhHHHHHHHHHHHHHhcc
Confidence 0 011128999985 2236799999999999876543
No 390
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.02 E-value=6.3e-05 Score=74.44 Aligned_cols=169 Identities=13% Similarity=0.078 Sum_probs=111.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE--cCCCchhHHHHHH-------HHHHhcCCEEE
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT--VYDHENEAAALMI-------ESSKKRGARVS 252 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~--~~e~~s~~~~~~~-------~~a~~~G~~v~ 252 (588)
+.+.+-.|+.||+...--..-| -++|+|+..++.++ ++|||+++. ..+|. ...-++ ...+..|++.+
T Consensus 68 dtLe~vyA~vf~aE~a~VRpq~-isGTHAI~~aLfg~-LRpgDell~i~G~PYD--TLeevIG~rg~~~gSL~dfgi~Y~ 143 (416)
T COG4100 68 DTLERVYAQVFGAEAALVRPQI-ISGTHAIACALFGI-LRPGDELLYITGSPYD--TLEEVIGLRGEGQGSLKDFGIKYK 143 (416)
T ss_pred hHHHHHHHHHhccccceeeeee-ecchhHHHHHHHhc-cCCCCeEEEecCCcch--hHHHHhccCCCCcccHHHhCccee
Confidence 4566677899998543212223 36789999999999 999999653 23332 121111 22455688999
Q ss_pred EEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCC----CCCCccCCHHHH-HHHHH--cCcEEEEeCC--CcC
Q 037063 253 SAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQS----KVTGARYSYMWM-SVAAE--KGWHVLLDAT--ALG 323 (588)
Q Consensus 253 ~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~s----n~tG~~~pl~~I-~~a~~--~g~~vvvDaa--~~~ 323 (588)
.+|+. .+|.+|.+.++..++ ++|+||.+.-.. .++=.+..+++| ...|+ .++.++||.| .++
T Consensus 144 ~v~Lt-~~gkiD~~~v~~~i~--------~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFv 214 (416)
T COG4100 144 AVPLT-ADGKIDIQAVKTAIS--------DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFV 214 (416)
T ss_pred ecccc-cCCcccHHHHHHhcC--------ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhh
Confidence 99998 789999999999998 899999886431 122222234444 55665 3899999998 344
Q ss_pred C-CCCCCCCCCCCCCcEEEeccCccCCCC-CCceEEEEEeCcchhcc
Q 037063 324 S-KDMDTLGLSLFKPDFLICSFYKIFGEN-PSGFGCLFVKKSSASVL 368 (588)
Q Consensus 324 ~-~d~~~l~l~~~~~D~vv~S~~K~~G~~-P~G~G~L~v~~~~~~~l 368 (588)
- +.....+ +|+++.|.=|--|.+ -+-.|++..|+++++..
T Consensus 215 E~~EPt~vG-----aDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~ 256 (416)
T COG4100 215 EEKEPTHVG-----ADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAA 256 (416)
T ss_pred hccCccccc-----hhhhccceeeCCCCceeeccceeechHHHHHhh
Confidence 2 2234455 999999999954410 12247888888877643
No 391
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.01 E-value=0.0087 Score=62.23 Aligned_cols=173 Identities=13% Similarity=0.139 Sum_probs=100.9
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhC-C---CC-CCC--eEE-EcCCCchhHHHHHHHHHHhcCCEEEEE
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESY-P---FY-SNP--RLL-TVYDHENEAAALMIESSKKRGARVSSA 254 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~-~---~~-~gd--~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v 254 (588)
++.+.|.+.++-.. -..|.|..++|+|+..++..- . .+ +-+ +++ ....||......|. .+ +..-...
T Consensus 102 ~l~~~l~~~~~~~~-~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals-~~---~~s~y~~ 176 (433)
T KOG1401|consen 102 ELEEVLSAVLGKGS-AERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALS-VT---GNSKYGL 176 (433)
T ss_pred HHHHHHHhcccCCC-ccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHH-hh---cccccCC
Confidence 56666666664321 124999999999987766532 1 11 112 255 56667764443332 11 2222222
Q ss_pred eccC--CC----CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCcC
Q 037063 255 EFAW--PN----LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATALG 323 (588)
Q Consensus 255 ~~~~--~~----~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~~ 323 (588)
++++ ++ ..-|++++++.+.. .+.....|++.-+.-.-|.+.. +..+ ++|+++|+++|.|..+-.
T Consensus 177 ~~~p~~p~v~~~~ynd~t~l~k~~~~-----h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG 251 (433)
T KOG1401|consen 177 PFDPIAPDVVTAEYNDSTALEKLFES-----HKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTG 251 (433)
T ss_pred CCCCCCCceeecccCCHHHHHHHHHh-----CCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhC
Confidence 2210 11 11368899999973 1123567777777655555543 2235 889999999999998764
Q ss_pred -CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCC
Q 037063 324 -SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGS 371 (588)
Q Consensus 324 -~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~ 371 (588)
+. ...-++ ..||+.. +-|.+|. ..-+|+..+++++.+.+.+.
T Consensus 252 ~gR~g~~~a~e~~~---~~PDI~t--~aK~L~g-GlPigA~~v~~kV~~~i~~~ 299 (433)
T KOG1401|consen 252 LGRLGYGWAQEYFG---VTPDITT--VAKPLGG-GLPIGATGVRDKVAEMISPG 299 (433)
T ss_pred ccccchHHHHHHhC---cCCccee--ehhhccC-CceeEEEeehHHHHhhcCCC
Confidence 20 011122 2388654 5586763 34589999999998877654
No 392
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.97 E-value=0.0007 Score=67.54 Aligned_cols=250 Identities=16% Similarity=0.196 Sum_probs=137.1
Q ss_pred EEecCHHHHHHHHHHhCCCCCCCe-EEEcCCCchhHHHHHHHHHHhcC-CEEEEEec-cCCCCccCHHHHHHHHhhhccc
Q 037063 202 VFTANQSSAFKLLAESYPFYSNPR-LLTVYDHENEAAALMIESSKKRG-ARVSSAEF-AWPNLRIHSGKLMKKIVGKRKK 278 (588)
Q Consensus 202 vft~g~T~al~lv~~s~~~~~gd~-ll~~~e~~s~~~~~~~~~a~~~G-~~v~~v~~-~~~~~~i~~e~l~~~i~~~~~~ 278 (588)
+-+-++|.|+.+.++-+.-.-.++ |....+... .+ ..+.++.| .+|...+. +.++-.+|.+.+...|..
T Consensus 103 vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~-nH---~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~---- 174 (410)
T KOG1412|consen 103 VQSLSGTGALRIAADFLATFYNKNTVYVSNPTWE-NH---HAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLES---- 174 (410)
T ss_pred eeeccccchhhhhHHHHHHhcccceeEecCCchh-HH---HHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhh----
Confidence 344578899988877553111234 443332221 12 23456678 55555554 224556888888888872
Q ss_pred cCCCcceEEEEeCC-CCCCCccCCH-HH--H-HHHHHcCcEEEEeCC-CcCC---CCCCCC----CCCCCCC-cEEEecc
Q 037063 279 KKKKKRGLFVFPLQ-SKVTGARYSY-MW--M-SVAAEKGWHVLLDAT-ALGS---KDMDTL----GLSLFKP-DFLICSF 344 (588)
Q Consensus 279 ~~~~~t~Lv~~~~~-sn~tG~~~pl-~~--I-~~a~~~g~~vvvDaa-~~~~---~d~~~l----~l~~~~~-D~vv~S~ 344 (588)
.+...++++.++ .||||.-..- +| | +..++++.+.+.|-+ |... .+.+.. .++ .+. =|++-||
T Consensus 175 --APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~-~g~e~fv~QSF 251 (410)
T KOG1412|consen 175 --APEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVE-QGFELFVCQSF 251 (410)
T ss_pred --CCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHh-cCCeEEEEhhh
Confidence 145567777776 8999987543 34 4 667788999999987 3332 111111 011 112 3566699
Q ss_pred CccCCCCCCceEEEEE--eCcc-hhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHH
Q 037063 345 YKIFGENPSGFGCLFV--KKSS-ASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLD 421 (588)
Q Consensus 345 ~K~~G~~P~G~G~L~v--~~~~-~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~ 421 (588)
-|-||+...++|+|-+ ++.. +..+.... ..+ .+ - ....|+..+. -....-|.
T Consensus 252 aKNfGlYneRvGnltvv~~n~a~i~~v~SQl-------~lv----------iR----~-~~SNPPAyGA---rIV~kvL~ 306 (410)
T KOG1412|consen 252 AKNFGLYNERVGNLTVVVNNPAVIAGVKSQL-------TLV----------IR----S-NWSNPPAYGA---RIVHKVLS 306 (410)
T ss_pred hhhcccccccccceEEEecChhHHHHHHHHH-------HHH----------Hh----h-ccCCCcchhh---HHHHHHhc
Confidence 9988855667888764 3322 11111100 000 00 0 1111222121 01111111
Q ss_pred ---HHHHh--CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHH
Q 037063 422 ---HADAL--GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKL 496 (588)
Q Consensus 422 ---~l~~~--G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~ 496 (588)
..+++ .+..+..|+++++..|++.|..|+- |+-. ++. ..+.++++|. + +.+..|..+
T Consensus 307 tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~T-------PGtW---DHI-~~QiGMFSyT--G-----Ltp~qV~~l 368 (410)
T KOG1412|consen 307 TPELREQWIQSIKTMSSRIKKMRTALRDHLVALKT-------PGTW---DHI-TQQIGMFSYT--G-----LTPAQVDHL 368 (410)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------CCcH---HHH-Hhhccceeec--C-----CCHHHHHHH
Confidence 11111 2688899999999999999999843 3210 000 1344555553 3 669999999
Q ss_pred HHhCCcEec
Q 037063 497 ADRHNISLS 505 (588)
Q Consensus 497 l~~~gI~v~ 505 (588)
.+.+.|.+.
T Consensus 369 i~~h~vyLl 377 (410)
T KOG1412|consen 369 IENHKVYLL 377 (410)
T ss_pred HHhceEEEe
Confidence 999999874
No 393
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=96.84 E-value=0.078 Score=53.03 Aligned_cols=353 Identities=14% Similarity=0.110 Sum_probs=188.3
Q ss_pred hccCCCCCCeeeecCCC----CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchh
Q 037063 103 DYFHLSLNNYVCFDYIG----HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEES 178 (588)
Q Consensus 103 ~f~~l~~~~~vyLD~a~----~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~ 178 (588)
+|. +|+++.-|||... .|-.-+.|+++....+.. +-.| +++. ..
T Consensus 39 QYm-fDE~g~~yLDCInNVaHvghchp~VV~A~~kQmat-~~tN--------------------------~RFl----hd 86 (452)
T KOG1403|consen 39 QYM-FDEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMAT-ISTN--------------------------NRFL----HD 86 (452)
T ss_pred cee-eccCcccHHHHhhhhhhcccCCHHHHHHHHHHHhH-hccc--------------------------chhh----HH
Confidence 343 4667777887543 466677888876555421 1111 1111 15
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCC-CCeEEEcCCCchhHHHHHHHHHH---hcC---CE
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYS-NPRLLTVYDHENEAAALMIESSK---KRG---AR 250 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~-gd~ll~~~e~~s~~~~~~~~~a~---~~G---~~ 250 (588)
++++-+|+..+.+=+. ..+.|+.++++|..++++-.. +.. .|.|+.+.-||.-.- .+.++.- ..| .+
T Consensus 87 ~lv~cA~~l~stlPeL----svc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~-s~mE~SPYKF~~g~~v~k 161 (452)
T KOG1403|consen 87 ELVQCARTLTSTLPEL----SVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQ-SVMEVSPYKFNQGGGVAK 161 (452)
T ss_pred HHHHHHHHHhhcCCCc----eEEEEecCCchhhHHHHHHHHhhcccCceEEEechhcccee-eeeeccceeccCCCCcCC
Confidence 6777777777766554 358999999999988765331 333 344556655554111 1112211 112 12
Q ss_pred EEEEeccC-CC----------------CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH----H-HHH
Q 037063 251 VSSAEFAW-PN----------------LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW----M-SVA 308 (588)
Q Consensus 251 v~~v~~~~-~~----------------~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~----I-~~a 308 (588)
..+|.+.+ |+ +..-.+++++.+.. ...+......++....++--|.++|-.. + ...
T Consensus 162 pd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d--~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~V 239 (452)
T KOG1403|consen 162 PDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQD--QLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAV 239 (452)
T ss_pred CceeEecCCccccccccccccCCcccchhhhhhHHHHHHHH--HHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHH
Confidence 12222210 11 11223456665542 1122234445555566677899988655 4 556
Q ss_pred HHcCcEEEEeCCCcC----CCCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecC
Q 037063 309 AEKGWHVLLDATALG----SKDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPS 384 (588)
Q Consensus 309 ~~~g~~vvvDaa~~~----~~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~ 384 (588)
+.+|-..|.|.+|.. +...=.+.+-.+-||++. .-|-.|- ..-++++...+++.+.+... |.-
T Consensus 240 r~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVt--mgKpmGN-GhPVa~VattkeIA~Af~at-----gv~----- 306 (452)
T KOG1403|consen 240 RSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVT--MGKPMGN-GHPVAAVATTKEIAQAFHAT-----GVE----- 306 (452)
T ss_pred hcCCCeEEeehhhhcccccchhhhhhhhhccccchhe--ecccCCC-CCeeeEEeccHHHHHHhccc-----cce-----
Confidence 778999999999755 110001111123367654 3464442 33478888888887655422 110
Q ss_pred CCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEe
Q 037063 385 FSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIY 464 (588)
Q Consensus 385 ~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~ 464 (588)
.|...|-.+++ ...++..++.+.-+++.+|..+.-++|...|.+++-. -+++
T Consensus 307 -------------YFNTyGGnPVs-------CAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~k--------h~~I 358 (452)
T KOG1403|consen 307 -------------YFNTYGGNPVS-------CAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQK--------HECI 358 (452)
T ss_pred -------------ehhccCCCchh-------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhh--------ccce
Confidence 12122222222 2234444444444888999999999999888876422 2344
Q ss_pred CCCCCCCcc--cEEEEEee-cCCCCCcC----HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcC
Q 037063 465 GPKVMFDRG--PSLAFNVF-DWNGTRID----PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRS 537 (588)
Q Consensus 465 ~p~~~~~rg--~iv~f~~~-~~~g~~i~----~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~ 537 (588)
|+ -|| -++.+.+. |.+...-+ ...+.++-+.++|.+++-. .
T Consensus 359 GD----vRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDG----------------------------P 406 (452)
T KOG1403|consen 359 GD----VRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADG----------------------------P 406 (452)
T ss_pred ec----cccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCC----------------------------C
Confidence 53 233 23334332 22111111 1124455566788876420 2
Q ss_pred CccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 538 GVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 538 g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
+...+.+-+-..-|+|+++.++..|.++|-
T Consensus 407 h~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 407 HRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred CCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 223677777667789999999999888765
No 394
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=95.84 E-value=0.063 Score=54.74 Aligned_cols=248 Identities=15% Similarity=0.130 Sum_probs=134.0
Q ss_pred eEEEec--CHHHHHHHHHHhCC-CCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec-cCCCCccCHHHHHHHHhhh
Q 037063 200 TLVFTA--NQSSAFKLLAESYP-FYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF-AWPNLRIHSGKLMKKIVGK 275 (588)
Q Consensus 200 ~vvft~--g~T~al~lv~~s~~-~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~-~~~~~~i~~e~l~~~i~~~ 275 (588)
.|+++. ++|.|+.+.++-+. +-++..|..+.+...|.. ..-+..|+.+....- +..+..+|.+.+.+.+.+
T Consensus 120 Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~----~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~- 194 (427)
T KOG1411|consen 120 RIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHK----NIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGE- 194 (427)
T ss_pred ceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccC----ccccccCcceeeeeeccccccccchHHHHHHHhc-
Confidence 466654 68899988776542 345556655444333222 222456888866654 335566787776666652
Q ss_pred ccccCCCcceEEEEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCC-CcCCCCCCCCCCCC--------CCCc-EEE
Q 037063 276 RKKKKKKKRGLFVFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDAT-ALGSKDMDTLGLSL--------FKPD-FLI 341 (588)
Q Consensus 276 ~~~~~~~~t~Lv~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa-~~~~~d~~~l~l~~--------~~~D-~vv 341 (588)
..+.--++.-...+|+||+--..+ +| ++.++.+..-++|.+ |... ..+++.+. .+.+ +++
T Consensus 195 ----~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfa--SG~~d~DA~avR~F~~~g~~~~la 268 (427)
T KOG1411|consen 195 ----APEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFA--SGDLDKDAQAVRLFVEDGHEILLA 268 (427)
T ss_pred ----CCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccc--cCCchhhHHHHHHHHHcCCceEee
Confidence 112333333444589999865443 36 888999999999988 3332 12222111 1123 455
Q ss_pred eccCccCCCCCCceEEEEEe-Cc--chhcc----cCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHH
Q 037063 342 CSFYKIFGENPSGFGCLFVK-KS--SASVL----SGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKL 414 (588)
Q Consensus 342 ~S~~K~~G~~P~G~G~L~v~-~~--~~~~l----~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~ 414 (588)
-|+-|-+|.....+|++-|= ++ ...++ +....+ + ..+|++.+....+
T Consensus 269 QSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRp---m-----------------------YSnPP~hGArIv~ 322 (427)
T KOG1411|consen 269 QSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRP---M-----------------------YSNPPLHGARIVA 322 (427)
T ss_pred hhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcc---c-----------------------ccCCCccchhhhh
Confidence 59999777545678887542 22 11111 111100 0 1122222210000
Q ss_pred HHHH--HH--HHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCH
Q 037063 415 VECK--GL--DHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDP 490 (588)
Q Consensus 415 al~~--aL--~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~ 490 (588)
-+.. .| +++.+ ++.+..|+..+++.|++.|.+. |.++-. .+. ..+-++++|. + +++
T Consensus 323 ~Il~d~~l~~~W~~e--vk~MadRi~~mR~~L~d~L~~~-------gs~~~W---~hI-~~QIGMF~fT--g-----l~p 382 (427)
T KOG1411|consen 323 TILSDPDLKNQWLGE--VKGMADRIISMRQQLFDALEKE-------GSPGNW---SHI-TKQIGMFCFT--G-----LNP 382 (427)
T ss_pred hccCChHHHHHHHHH--HHHHHHhhhhhHHHHhHHhhcC-------CCCccH---HHH-HHhhheeeec--C-----CCH
Confidence 0000 11 11222 5778899999999999999885 332200 000 1344555554 3 569
Q ss_pred HHHHHHHHhCCcEe
Q 037063 491 ALVQKLADRHNISL 504 (588)
Q Consensus 491 ~~v~~~l~~~gI~v 504 (588)
++|.++.+++.|.+
T Consensus 383 eQv~~l~ke~~iYm 396 (427)
T KOG1411|consen 383 EQVDWLTKEYHIYL 396 (427)
T ss_pred HHHHHHHhhheeee
Confidence 99999999998876
No 395
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=95.78 E-value=0.36 Score=49.52 Aligned_cols=216 Identities=16% Similarity=0.150 Sum_probs=119.3
Q ss_pred CHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCcCCC------CCCCCCC
Q 037063 264 HSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATALGSK------DMDTLGL 332 (588)
Q Consensus 264 ~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~~~~------d~~~l~l 332 (588)
++++++++|.+- ++++.....+++.-.++.-|--+- ...+ +++++||+.++||.+|..+- ..+.++|
T Consensus 254 Cl~~Ve~li~~~--~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l 331 (484)
T KOG1405|consen 254 CLAEVEDLIVKY--RKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNL 331 (484)
T ss_pred HHHHHHHHHHHH--hhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCC
Confidence 345677777632 222233445555555555554432 4457 88999999999999987741 1234454
Q ss_pred CCCCCcEEEeccCc-cCCCCCCceEEEEEeCcchhcccCC-CCCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 333 SLFKPDFLICSFYK-IFGENPSGFGCLFVKKSSASVLSGS-TSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 333 ~~~~~D~vv~S~~K-~~G~~P~G~G~L~v~~~~~~~l~~~-~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
+ .++|.+.+| | +.. | | .+-..++.. -+++ .+. + +.|-|.-.
T Consensus 332 ~-~PpD~vTFS--KK~q~----g-G-ffh~~~frp-n~pYrifN--------------T-----------WmGdP~k~-- 374 (484)
T KOG1405|consen 332 D-SPPDVVTFS--KKFQT----G-G-FFHDEEFRP-NEPYRIFN--------------T-----------WMGDPSKN-- 374 (484)
T ss_pred C-CCccceehh--hhhhc----C-c-cccCcccCC-CchHHHhh--------------h-----------hcCChHHH--
Confidence 3 458877654 5 332 1 3 232333211 0111 111 1 12222111
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCH
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDP 490 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~ 490 (588)
..+...++.+++ +.+.+.....-+.|..+|.+|.-.. |+. +. ....||.++++..++.. -.
T Consensus 375 ---lll~~vv~~I~~---~~Ll~n~~~vG~~l~~gL~~Lq~~~-----p~~-~~---~~RGrGTF~a~d~ps~~----~R 435 (484)
T KOG1405|consen 375 ---LLLEEVVQEIKR---EDLLNNVAHVGKALLKGLLELQAKY-----PGK-IN---NLRGRGTFIAWDCPSGS----IR 435 (484)
T ss_pred ---HHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHHhC-----chh-hh---cccccceEEEEeCCChH----HH
Confidence 223345555544 5666777777788888887763211 110 10 01136788888877621 13
Q ss_pred HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 491 ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 491 ~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
+.+...+..+||.++ | | |...||+-+...-.....+-+++.+.+.|.
T Consensus 436 dk~i~~~~~nGv~~G-G--C---------------------------g~~siRfRPsLvf~~~Ha~i~l~~~~k~l~ 482 (484)
T KOG1405|consen 436 DKLILIARLNGVNLG-G--C---------------------------GDKSIRFRPSLVFRKHHADIFLDIFDKILA 482 (484)
T ss_pred HHHHHHHHHcCceec-c--c---------------------------ccceeeeccceeehhhhHHHHHHHHHHHhc
Confidence 556777788898874 2 2 111677766666677888899999888765
No 396
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=94.50 E-value=0.098 Score=48.22 Aligned_cols=53 Identities=11% Similarity=0.095 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHhC--CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCC
Q 037063 179 ELESKIRKRIMDFMN--ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDH 232 (588)
Q Consensus 179 ~~~~~~r~~ia~~lg--a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~ 232 (588)
++.+.+.+.+.+.+| ++.+...|++|+|+++|+.+++.++ ..+||.|++...+
T Consensus 96 ~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l-~dpGD~VlVp~P~ 150 (153)
T PLN02994 96 NFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCI-ADPGDAFLVPTPY 150 (153)
T ss_pred HHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHH-cCCCCEEEEeCCC
Confidence 444555555555545 3322335999999999999999999 8999998766554
No 397
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=70.87 E-value=47 Score=34.05 Aligned_cols=124 Identities=13% Similarity=0.055 Sum_probs=69.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCe--EEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPR--LLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~--ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
-+..++++++|++.--.--.+.++|.|.+.+.+...++... .+.|.+ |+.....|..--..|.+..+..|..+..|+
T Consensus 99 i~~~~~a~~~ia~~~a~~i~dg~~IlTh~~S~~v~~~l~~A-~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~ 177 (301)
T COG1184 99 IDRVEKAKERIAEIGAERIHDGDVILTHSFSKTVLEVLKTA-ADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIV 177 (301)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCEEEEecCcHHHHHHHHHh-hhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEe
Confidence 34456667777665322122234999988777766666654 455653 444334443333345566677898888775
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeC
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDA 319 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDa 319 (588)
- ..+-..++ .-.++++=.+.--..|..+..-. | ..||+.+.+|++=+
T Consensus 178 D---------sa~~~~~~--------~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~a 228 (301)
T COG1184 178 D---------SAVGAFMS--------RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVVA 228 (301)
T ss_pred c---------hHHHHHHH--------hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEEe
Confidence 2 23333343 22344444444444565555332 5 67888888887744
No 398
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=64.10 E-value=45 Score=28.61 Aligned_cols=81 Identities=7% Similarity=0.074 Sum_probs=54.5
Q ss_pred cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HH
Q 037063 229 VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SV 307 (588)
Q Consensus 229 ~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~ 307 (588)
..+.|.--...+..++++.|.+|..++.+ ++.+++.+.+.+ .++.+|.++.. .+.......++ +.
T Consensus 9 ~~~~~~lGl~~la~~l~~~G~~v~~~d~~-----~~~~~l~~~~~~-------~~pd~V~iS~~--~~~~~~~~~~l~~~ 74 (121)
T PF02310_consen 9 PGEVHPLGLLYLAAYLRKAGHEVDILDAN-----VPPEELVEALRA-------ERPDVVGISVS--MTPNLPEAKRLARA 74 (121)
T ss_dssp TTSSTSHHHHHHHHHHHHTTBEEEEEESS-----B-HHHHHHHHHH-------TTCSEEEEEES--SSTHHHHHHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHCCCeEEEECCC-----CCHHHHHHHHhc-------CCCcEEEEEcc--CcCcHHHHHHHHHH
Confidence 44555534445567778889999998765 455888887763 57788888653 24444455566 66
Q ss_pred HHHc--CcEEEEeCCCcC
Q 037063 308 AAEK--GWHVLLDATALG 323 (588)
Q Consensus 308 a~~~--g~~vvvDaa~~~ 323 (588)
+|+. ++.+++=+.+..
T Consensus 75 ~k~~~p~~~iv~GG~~~t 92 (121)
T PF02310_consen 75 IKERNPNIPIVVGGPHAT 92 (121)
T ss_dssp HHTTCTTSEEEEEESSSG
T ss_pred HHhcCCCCEEEEECCchh
Confidence 7765 889999887533
No 399
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=59.49 E-value=76 Score=30.40 Aligned_cols=97 Identities=10% Similarity=0.059 Sum_probs=61.1
Q ss_pred cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HH
Q 037063 229 VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SV 307 (588)
Q Consensus 229 ~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~ 307 (588)
..|.|.--..-+..+.+..|.+|+.+..+ +..+++.+.+.+ .++.+|.++..... ....+.++ +.
T Consensus 91 ~gd~H~lG~~~v~~~l~~~G~~vi~lG~~-----~p~~~l~~~~~~-------~~~d~v~lS~~~~~--~~~~~~~~i~~ 156 (201)
T cd02070 91 EGDIHDIGKNLVATMLEANGFEVIDLGRD-----VPPEEFVEAVKE-------HKPDILGLSALMTT--TMGGMKEVIEA 156 (201)
T ss_pred CCccchHHHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHH-------cCCCEEEEeccccc--cHHHHHHHHHH
Confidence 44666522333356678899999877654 677888888873 67889988865433 34445555 66
Q ss_pred HHHc----CcEEEEeCCCcCCCCCCCCCCCCCCCcEEEecc
Q 037063 308 AAEK----GWHVLLDATALGSKDMDTLGLSLFKPDFLICSF 344 (588)
Q Consensus 308 a~~~----g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~ 344 (588)
+++. ++.|++=+......-...+| +|+++-+.
T Consensus 157 lr~~~~~~~~~i~vGG~~~~~~~~~~~G-----aD~~~~da 192 (201)
T cd02070 157 LKEAGLRDKVKVMVGGAPVNQEFADEIG-----ADGYAEDA 192 (201)
T ss_pred HHHCCCCcCCeEEEECCcCCHHHHHHcC-----CcEEECCH
Confidence 6665 56888877654431123444 77766543
No 400
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=55.04 E-value=1.4e+02 Score=31.15 Aligned_cols=133 Identities=11% Similarity=0.141 Sum_probs=78.3
Q ss_pred hHHHHHHHHHHHHHhCCC------------CCCceEEEe----cCHHHHHHHHHHhCCCCCCCeEE-E-cCCCchhHHHH
Q 037063 178 SELESKIRKRIMDFMNIS------------EDDYTLVFT----ANQSSAFKLLAESYPFYSNPRLL-T-VYDHENEAAAL 239 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~------------~~e~~vvft----~g~T~al~lv~~s~~~~~gd~ll-~-~~e~~s~~~~~ 239 (588)
..+.+.+++.+.+++.-. ...+.+.|+ .|-|..+--++.-| .+.|.+|+ . ...+-+.++..
T Consensus 107 ~~v~~~l~~~l~~il~~~~~~~~~~~~~~~~~p~Vil~vGVNG~GKTTTIaKLA~~l-~~~g~~VllaA~DTFRAaAiEQ 185 (340)
T COG0552 107 ETVKEALREALIEILRPVDKVDLPLEIPKEKKPFVILFVGVNGVGKTTTIAKLAKYL-KQQGKSVLLAAGDTFRAAAIEQ 185 (340)
T ss_pred HHHHHHHHHHHHHHhcccccccchhhhccCCCcEEEEEEecCCCchHhHHHHHHHHH-HHCCCeEEEEecchHHHHHHHH
Confidence 455566666666666521 113444444 23366666666666 57777744 3 44565677888
Q ss_pred HHHHHHhcCCEEEEEeccCCC-CccCHHHHHHHHhhhccccCCCcceEEEEeCC---CCCCCccCCHHHH-HHHHHc---
Q 037063 240 MIESSKKRGARVSSAEFAWPN-LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQ---SKVTGARYSYMWM-SVAAEK--- 311 (588)
Q Consensus 240 ~~~~a~~~G~~v~~v~~~~~~-~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~---sn~tG~~~pl~~I-~~a~~~--- 311 (588)
+...+++.|+.++.-+-. .+ -.+-.+.++.+.. .+..+|.+... +|-+.....++.| +.+++.
T Consensus 186 L~~w~er~gv~vI~~~~G-~DpAaVafDAi~~Aka--------r~~DvvliDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ 256 (340)
T COG0552 186 LEVWGERLGVPVISGKEG-ADPAAVAFDAIQAAKA--------RGIDVVLIDTAGRLHNKKNLMDELKKIVRVIKKDDPD 256 (340)
T ss_pred HHHHHHHhCCeEEccCCC-CCcHHHHHHHHHHHHH--------cCCCEEEEeCcccccCchhHHHHHHHHHHHhccccCC
Confidence 888899999998874321 11 1133345555554 67888888864 2333333344555 555553
Q ss_pred ---CcEEEEeCC
Q 037063 312 ---GWHVLLDAT 320 (588)
Q Consensus 312 ---g~~vvvDaa 320 (588)
-+++++||.
T Consensus 257 ap~e~llvlDAt 268 (340)
T COG0552 257 APHEILLVLDAT 268 (340)
T ss_pred CCceEEEEEEcc
Confidence 378888997
No 401
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=54.61 E-value=92 Score=29.80 Aligned_cols=98 Identities=11% Similarity=0.073 Sum_probs=62.0
Q ss_pred cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HH
Q 037063 229 VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SV 307 (588)
Q Consensus 229 ~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~ 307 (588)
..|.|.--..-+..+.+..|.+|+++-.+ +..+++.+.+.+ .++.+|.++.....+ ...+.++ +.
T Consensus 93 ~gd~H~lG~~~v~~~l~~~G~~vi~LG~~-----vp~e~~v~~~~~-------~~pd~v~lS~~~~~~--~~~~~~~i~~ 158 (197)
T TIGR02370 93 EGDVHDIGKNIVVTMLRANGFDVIDLGRD-----VPIDTVVEKVKK-------EKPLMLTGSALMTTT--MYGQKDINDK 158 (197)
T ss_pred CCchhHHHHHHHHHHHHhCCcEEEECCCC-----CCHHHHHHHHHH-------cCCCEEEEccccccC--HHHHHHHHHH
Confidence 44566422223345668899999998665 677888888873 678888888654333 3334555 67
Q ss_pred HHHc----CcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccC
Q 037063 308 AAEK----GWHVLLDATALGSKDMDTLGLSLFKPDFLICSFY 345 (588)
Q Consensus 308 a~~~----g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~ 345 (588)
+++. ++.+++=+...-+.-...++ +|++.-+.+
T Consensus 159 l~~~~~~~~v~i~vGG~~~~~~~~~~~g-----ad~~~~da~ 195 (197)
T TIGR02370 159 LKEEGYRDSVKFMVGGAPVTQDWADKIG-----ADVYGENAS 195 (197)
T ss_pred HHHcCCCCCCEEEEEChhcCHHHHHHhC-----CcEEeCChh
Confidence 7776 36788888765442123455 777765543
No 402
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=49.19 E-value=1.9e+02 Score=32.72 Aligned_cols=102 Identities=17% Similarity=0.172 Sum_probs=66.2
Q ss_pred cCHHHHHHHHHHhCCCCCCCeEE--EcCCCch-hHHHHHHHHHHhcCC-EE-EEEeccC-CCCccCHHHHHHHHhhhccc
Q 037063 205 ANQSSAFKLLAESYPFYSNPRLL--TVYDHEN-EAAALMIESSKKRGA-RV-SSAEFAW-PNLRIHSGKLMKKIVGKRKK 278 (588)
Q Consensus 205 ~g~T~al~lv~~s~~~~~gd~ll--~~~e~~s-~~~~~~~~~a~~~G~-~v-~~v~~~~-~~~~i~~e~l~~~i~~~~~~ 278 (588)
.+...|.+.+.+++ +.+.+|+ .++|.-. ++..-+....++.|+ .+ .++|-.. +...++.+.+++...
T Consensus 53 ~~m~~a~~ri~~ai--~~~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~~----- 125 (575)
T PRK11070 53 SGIEKAVELLYNAL--REGTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQAHA----- 125 (575)
T ss_pred hCHHHHHHHHHHHH--HCCCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHHHh-----
Confidence 67788888888885 4556643 4555443 233344566788898 45 4567432 334688888888766
Q ss_pred cCCCcceEEEEeCCCCCCCccCCHHHHHHHHHcCcEEEEeCCC
Q 037063 279 KKKKKRGLFVFPLQSKVTGARYSYMWMSVAAEKGWHVLLDATA 321 (588)
Q Consensus 279 ~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~~g~~vvvDaa~ 321 (588)
..+.|++..- .|.. .+++|+.|++.|+-|||=.=|
T Consensus 126 ---~~~~LiItvD----~Gi~-~~e~i~~a~~~gidvIVtDHH 160 (575)
T PRK11070 126 ---RGAQLIVTVD----NGIS-SHAGVAHAHALGIPVLVTDHH 160 (575)
T ss_pred ---cCCCEEEEEc----CCcC-CHHHHHHHHHCCCCEEEECCC
Confidence 4555655543 2333 788999999999988774333
No 403
>PF10518 TAT_signal: TAT (twin-arginine translocation) pathway signal sequence; InterPro: IPR019546 The twin-arginine translocation (Tat) pathway serves the role of transporting folded proteins across energy-transducing membranes []. Homologues of the genes that encode the transport apparatus occur in archaea, bacteria, chloroplasts, and plant mitochondria []. In bacteria, the Tat pathway catalyses the export of proteins from the cytoplasm across the inner/cytoplasmic membrane. In chloroplasts, the Tat components are found in the thylakoid membrane and direct the import of proteins from the stroma. The Tat pathway acts separately from the general secretory (Sec) pathway, which transports proteins in an unfolded state []. It is generally accepted that the primary role of the Tat system is to translocate fully folded proteins across membranes. An example of proteins that need to be exported in their 3D conformation are redox proteins that have acquired complex multi-atom cofactors in the bacterial cytoplasm (or the chloroplast stroma or mitochondrial matrix). They include hydrogenases, formate dehydrogenases, nitrate reductases, trimethylamine N-oxide (TMAO) reductases and dimethyl sulphoxide (DMSO) reductases [, ]. The Tat system can also export whole heteroligomeric complexes in which some proteins have no Tat signal. This is the case of the DMSO reductase or formate dehydrogenase complexes. But there are also other cases where the physiological rationale for targeting a protein to the Tat signal is less obvious. Indeed, there are examples of homologous proteins that are in some cases targeted to the Tat pathway and in other cases to the Sec apparatus. Some examples are: copper nitrite reductases, flavin domains of flavocytochrome c and N-acetylmuramoyl-L-alanine amidases []. In halophilic archaea such as Halobacterium almost all secreted proteins appear to be Tat targeted. It has been proposed to be a response to the difficulties these organisms would otherwise face in successfully folding proteins extracellularly at high ionic strength []. The Tat signal peptide consists of three motifs: the positively charged N-terminal motif, the hydrophobic region and the C-terminal region that generally ends with a consensus short motif (A-x-A) specifying cleavage by signal peptidase. Sequence analysis revealed that signal peptides capable of targeting the Tat protein contain the consensus sequence [ST]-R-R-x-F-L-K. The nearly invariant twin-arginine gave rise to the pathway's name. In addition the h-region of Tat signal peptides is typically less hydrophobic than that of Sec-specific signal peptides [, ].
Probab=48.83 E-value=8.1 Score=24.11 Aligned_cols=12 Identities=17% Similarity=0.268 Sum_probs=9.4
Q ss_pred HHhhhhHhhhcc
Q 037063 48 AARHEFKVTTTS 59 (588)
Q Consensus 48 ~~~~~~~~~~~~ 59 (588)
-+||+|||.++.
T Consensus 2 ~sRR~fLk~~~a 13 (26)
T PF10518_consen 2 LSRRQFLKGGAA 13 (26)
T ss_pred CcHHHHHHHHHH
Confidence 379999998753
No 404
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=47.98 E-value=1.4e+02 Score=25.63 Aligned_cols=81 Identities=9% Similarity=0.005 Sum_probs=49.7
Q ss_pred cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HH
Q 037063 229 VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SV 307 (588)
Q Consensus 229 ~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~ 307 (588)
..|.|.--...+..+.+..|.+|..... .+..+++.+.+.+ .++.+|.++... +-....+..+ +.
T Consensus 8 ~~e~H~lG~~~~~~~l~~~G~~V~~lg~-----~~~~~~l~~~~~~-------~~pdvV~iS~~~--~~~~~~~~~~i~~ 73 (119)
T cd02067 8 GGDGHDIGKNIVARALRDAGFEVIDLGV-----DVPPEEIVEAAKE-------EDADAIGLSGLL--TTHMTLMKEVIEE 73 (119)
T ss_pred CCchhhHHHHHHHHHHHHCCCEEEECCC-----CCCHHHHHHHHHH-------cCCCEEEEeccc--cccHHHHHHHHHH
Confidence 4455542233345667889999977653 3677888887763 577888886542 2233444555 66
Q ss_pred HHHc---CcEEEEeCCCcC
Q 037063 308 AAEK---GWHVLLDATALG 323 (588)
Q Consensus 308 a~~~---g~~vvvDaa~~~ 323 (588)
+++. ++.+++=+.+..
T Consensus 74 l~~~~~~~~~i~vGG~~~~ 92 (119)
T cd02067 74 LKEAGLDDIPVLVGGAIVT 92 (119)
T ss_pred HHHcCCCCCeEEEECCCCC
Confidence 6665 566777666544
No 405
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=46.94 E-value=1.8e+02 Score=30.14 Aligned_cols=116 Identities=13% Similarity=0.111 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhC--CCCCCceEEEecCHHH-HHHHHHHhCCCCCCCe--EEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 182 SKIRKRIMDFMN--ISEDDYTLVFTANQSS-AFKLLAESYPFYSNPR--LLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 182 ~~~r~~ia~~lg--a~~~e~~vvft~g~T~-al~lv~~s~~~~~gd~--ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
..+++.|+++-- +..++ +|+|-+.+. ++..+..+ .+.|.+ |+....-|..-...+.+...+.|+.+..++-
T Consensus 104 ~~~~~~I~~~a~~~i~~g~--~ILT~~~S~tv~~~l~~A--~~~~k~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtlI~D 179 (310)
T PRK08535 104 ENAVEKIGEIGAKRIRDGD--VIMTHCNSSAALSVIKTA--HEQGKDIEVIATETRPRNQGHITAKELAEYGIPVTLIVD 179 (310)
T ss_pred HHHHHHHHHHHHHHcCCCC--EEEEeCCcHHHHHHHHHH--HHCCCeEEEEEecCCchhhHHHHHHHHHHCCCCEEEEeh
Confidence 445556654332 22233 777766554 44444433 344544 4443333321122234455677999988864
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEE-eCCCCCCCccCCHHH---H-HHHHHcCcEEEEeC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVF-PLQSKVTGARYSYMW---M-SVAAEKGWHVLLDA 319 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~-~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDa 319 (588)
. .+-..+. +...|++ ...-..+|.+..--. + -+||.++++|+|=+
T Consensus 180 s---------av~~~m~---------~vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~a 229 (310)
T PRK08535 180 S---------AVRYFMK---------DVDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVAA 229 (310)
T ss_pred h---------HHHHHHH---------hCCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEec
Confidence 2 2333333 2223333 233334664444332 4 56788888887743
No 406
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=46.66 E-value=1.7e+02 Score=30.17 Aligned_cols=118 Identities=14% Similarity=0.133 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHhC--CCCCCceEEEecCHHH-HHHHHHHhCCCCCCCe--EEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 181 ESKIRKRIMDFMN--ISEDDYTLVFTANQSS-AFKLLAESYPFYSNPR--LLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 181 ~~~~r~~ia~~lg--a~~~e~~vvft~g~T~-al~lv~~s~~~~~gd~--ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
...++++|+++-. +..++ +|+|-+.+. ++..+..+. +.|.+ |+....-|..--..+.+.....|+.+..++
T Consensus 98 ~~~a~~~I~~~a~~~i~~g~--~ILT~~~S~tv~~~l~~a~--~~~~~f~V~v~EsrP~~~G~~~a~~L~~~gI~vtlI~ 173 (301)
T TIGR00511 98 SDKAQERIGEIGAKRIRDGD--VVMTHCNSEAALSVIKTAF--EQGKDIEVIATETRPRKQGHITAKELRDYGIPVTLIV 173 (301)
T ss_pred HHHHHHHHHHHHHHHcCCCC--EEEEECCcHHHHHHHHHHH--HcCCcEEEEEecCCCcchHHHHHHHHHHCCCCEEEEe
Confidence 3455666655431 22233 788866554 444444442 34444 443333332122233445567899998885
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC-HHH--H-HHHHHcCcEEEEeC
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS-YMW--M-SVAAEKGWHVLLDA 319 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p-l~~--I-~~a~~~g~~vvvDa 319 (588)
-. .+-..+. .-.++++=...-...|.+.. +-- + -+||.++++|+|=+
T Consensus 174 Ds---------a~~~~m~--------~vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~a 224 (301)
T TIGR00511 174 DS---------AVRYFMK--------EVDHVVVGADAITANGALINKIGTSQLALAAREARVPFMVAA 224 (301)
T ss_pred hh---------HHHHHHH--------hCCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEEc
Confidence 32 2333333 22233332222333554443 322 4 56788888887743
No 407
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=43.90 E-value=1.9e+02 Score=25.99 Aligned_cols=78 Identities=5% Similarity=0.012 Sum_probs=48.0
Q ss_pred cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HH
Q 037063 229 VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SV 307 (588)
Q Consensus 229 ~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~ 307 (588)
..|.|.--..-+..+++..|.+|+++..+ +.++++.+.+.+ .++.+|.++.... .....+.++ +.
T Consensus 12 ~gD~H~lG~~iv~~~lr~~G~eVi~LG~~-----vp~e~i~~~a~~-------~~~d~V~lS~~~~--~~~~~~~~~~~~ 77 (137)
T PRK02261 12 GADCHAVGNKILDRALTEAGFEVINLGVM-----TSQEEFIDAAIE-------TDADAILVSSLYG--HGEIDCRGLREK 77 (137)
T ss_pred CCChhHHHHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHH-------cCCCEEEEcCccc--cCHHHHHHHHHH
Confidence 44555422333355668899999998764 677888888763 6788888876644 222233444 66
Q ss_pred HHHc---CcEEEEeCC
Q 037063 308 AAEK---GWHVLLDAT 320 (588)
Q Consensus 308 a~~~---g~~vvvDaa 320 (588)
+++. ++.+++=++
T Consensus 78 L~~~~~~~~~i~vGG~ 93 (137)
T PRK02261 78 CIEAGLGDILLYVGGN 93 (137)
T ss_pred HHhcCCCCCeEEEECC
Confidence 6665 445555444
No 408
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=43.68 E-value=1.4e+02 Score=32.51 Aligned_cols=118 Identities=13% Similarity=0.116 Sum_probs=70.5
Q ss_pred HHHHHhcCCEEEEEeccC---C---CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcC-
Q 037063 241 IESSKKRGARVSSAEFAW---P---NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKG- 312 (588)
Q Consensus 241 ~~~a~~~G~~v~~v~~~~---~---~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g- 312 (588)
-..|+..|+....+.... . +|+||...+++.|+++ -...+++-+++-.-..+..|...-+..| ++|++++
T Consensus 246 hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideD--laagkkPLilia~iGasi~GqnDmi~kildi~eahak 323 (838)
T KOG0630|consen 246 HYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDED--LAAGKKPLILIADIGASICGQNDMILKILDICEAHAK 323 (838)
T ss_pred HHHHHHhCCchhheecccccccccccccccHHHHHHHHHHH--HhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhhh
Confidence 345677787555443321 1 3589999999999852 1222344555555556778888888888 9998886
Q ss_pred cEEEEeCCCcCCCCCCC----CCCCCCCCcEEEeccCccCCCCCCceEEEEEeC
Q 037063 313 WHVLLDATALGSKDMDT----LGLSLFKPDFLICSFYKIFGENPSGFGCLFVKK 362 (588)
Q Consensus 313 ~~vvvDaa~~~~~d~~~----l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~ 362 (588)
.+++.-+-+.+...+.. ++--....|.+....--|+|. |. .-++...+
T Consensus 324 fWLHasGhaiAALt~aepnnil~HV~eqldSMal~ialWLGi-PS-aPiV~LHR 375 (838)
T KOG0630|consen 324 FWLHASGHAIAALTCAEPNNILGHVEEQLDSMALNIALWLGI-PS-APIVLLHR 375 (838)
T ss_pred eeEeeccchhhheeecCcccchhHHHHHHhhccchhHHHhCC-CC-CceEEeec
Confidence 77777664333211111 111123367777777779997 54 44554444
No 409
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=42.50 E-value=83 Score=34.87 Aligned_cols=75 Identities=16% Similarity=0.097 Sum_probs=52.2
Q ss_pred HHHHHHHHHhcC-CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc--C
Q 037063 237 AALMIESSKKRG-ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK--G 312 (588)
Q Consensus 237 ~~~~~~~a~~~G-~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~--g 312 (588)
...+...++..| .+|..++.. ...++.+++.+.|.+ .++.+|.++.. |.......++ +.+|+. +
T Consensus 25 l~~lAa~L~~~G~~~V~iiD~~--~~~~~~~~~~~~l~~-------~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~ 92 (497)
T TIGR02026 25 VAYIGGALLDAGYHDVTFLDAM--TGPLTDEKLVERLRA-------HCPDLVLITAI---TPAIYIACETLKFARERLPN 92 (497)
T ss_pred HHHHHHHHHhcCCcceEEeccc--ccCCCHHHHHHHHHh-------cCcCEEEEecC---cccHHHHHHHHHHHHHHCCC
Confidence 334455566778 688888764 345677888888863 57889999753 4455555566 778876 9
Q ss_pred cEEEEeCCCcC
Q 037063 313 WHVLLDATALG 323 (588)
Q Consensus 313 ~~vvvDaa~~~ 323 (588)
+.||+=+.+..
T Consensus 93 ~~iV~GG~h~t 103 (497)
T TIGR02026 93 AIIVLGGIHPT 103 (497)
T ss_pred CEEEEcCCCcC
Confidence 99999887543
No 410
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=39.86 E-value=82 Score=30.53 Aligned_cols=60 Identities=15% Similarity=0.186 Sum_probs=34.2
Q ss_pred HHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHHHcCcEEEE
Q 037063 244 SKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAAEKGWHVLL 317 (588)
Q Consensus 244 a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~~g~~vvv 317 (588)
.+..|++++.++.+ +.+.|.++++ .-..+|++....+......-..-|+.|++.|+..++
T Consensus 40 l~~~g~~vv~~d~~------~~~~l~~al~--------g~d~v~~~~~~~~~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 40 LQALGAEVVEADYD------DPESLVAALK--------GVDAVFSVTPPSHPSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHTTTEEEES-TT-------HHHHHHHHT--------TCSEEEEESSCSCCCHHHHHHHHHHHHHHHT-SEEE
T ss_pred hhcccceEeecccC------CHHHHHHHHc--------CCceEEeecCcchhhhhhhhhhHHHhhhccccceEE
Confidence 35679998876654 7789999997 445555555443322111211223888888876555
No 411
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=39.47 E-value=1.2e+02 Score=30.31 Aligned_cols=86 Identities=13% Similarity=0.178 Sum_probs=54.6
Q ss_pred CCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC
Q 037063 222 SNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS 301 (588)
Q Consensus 222 ~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p 301 (588)
-||+||+..--.+| ..|+.+.....|.+|..+..= +| ++++|.+.++. .. .+..+|+++.- .|-..|
T Consensus 9 vG~ElL~G~ivdtN-a~~la~~L~~~G~~v~~~~~V-gD---~~~~I~~~l~~----a~-~r~D~vI~tGG---LGPT~D 75 (255)
T COG1058 9 VGDELLSGRIVDTN-AAFLADELTELGVDLARITTV-GD---NPDRIVEALRE----AS-ERADVVITTGG---LGPTHD 75 (255)
T ss_pred EccceecCceecch-HHHHHHHHHhcCceEEEEEec-CC---CHHHHHHHHHH----HH-hCCCEEEECCC---cCCCcc
Confidence 47888754333332 347788888999999988764 32 45677776652 12 34788888655 333332
Q ss_pred -HHHHHHHHHcCcEEEEeCC
Q 037063 302 -YMWMSVAAEKGWHVLLDAT 320 (588)
Q Consensus 302 -l~~I~~a~~~g~~vvvDaa 320 (588)
+-.-.+|+..|..+++|.-
T Consensus 76 DiT~e~vAka~g~~lv~~~~ 95 (255)
T COG1058 76 DLTAEAVAKALGRPLVLDEE 95 (255)
T ss_pred HhHHHHHHHHhCCCcccCHH
Confidence 2222678888999999864
No 412
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=39.30 E-value=88 Score=33.37 Aligned_cols=65 Identities=23% Similarity=0.198 Sum_probs=41.9
Q ss_pred CCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeC
Q 037063 248 GARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDA 319 (588)
Q Consensus 248 G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDa 319 (588)
.-++..+++..+....+.+.|.+.+.+ .-...+.++++- .--|.+.+++.| ++|++.|++|++|-
T Consensus 113 nQQllRvD~Ee~~~~~~~~~ll~~~~~-----~l~~~~~vVLSD--Y~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 113 NQQLLRLDFEEKFPIEDENKLLEKIKN-----ALKSFDALVLSD--YAKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred cceEEEecccccCcchhHHHHHHHHHH-----HhhcCCEEEEec--cccccchhHHHHHHHHHHcCCcEEECC
Confidence 445556655422222334444444441 113567777764 458999999998 99999999999993
No 413
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=38.43 E-value=93 Score=31.12 Aligned_cols=62 Identities=11% Similarity=0.096 Sum_probs=41.8
Q ss_pred CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCc---cCCHHHHHHHHHcCcEEEEeCCCcCC
Q 037063 259 PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGA---RYSYMWMSVAAEKGWHVLLDATALGS 324 (588)
Q Consensus 259 ~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~---~~pl~~I~~a~~~g~~vvvDaa~~~~ 324 (588)
....++++++...+.. -....+.+++.+.--.++ |. ..|+..|.+.|+.+.+|++|.+|++.
T Consensus 123 rG~~~t~~e~l~aaey---i~~~Gn~~viLcERG~tf-~y~r~~~D~~~ip~~k~~~~PVi~DpSHsvq 187 (258)
T TIGR01362 123 KGQFLSPWDMKNVVEK---VLSTGNKNILLCERGTSF-GYNNLVVDMRSLPIMRELGCPVIFDATHSVQ 187 (258)
T ss_pred CCCcCCHHHHHHHHHH---HHHcCCCcEEEEeCCCCc-CCCCcccchhhhHHHHhcCCCEEEeCCcccc
Confidence 3345677776665541 111246677777666654 44 56888887778889999999999975
No 414
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=37.55 E-value=4.7e+02 Score=28.43 Aligned_cols=128 Identities=13% Similarity=0.096 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHhCCCCC---------CceEEEe-cC----HHHHHHHHHHhCCCCCCCeE-E-EcCCCchhHHHHHHH
Q 037063 179 ELESKIRKRIMDFMNISED---------DYTLVFT-AN----QSSAFKLLAESYPFYSNPRL-L-TVYDHENEAAALMIE 242 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~---------e~~vvft-~g----~T~al~lv~~s~~~~~gd~l-l-~~~e~~s~~~~~~~~ 242 (588)
++.+.+++.+.+.+..+++ ...++|+ ++ +|.+.+++.... ...|.+| + +...+-+.+...+..
T Consensus 195 ~~~~~l~~~L~~~l~~~~~~~~~~g~~~~~vi~lvGptGvGKTTtaaKLA~~~~-~~~G~~V~Lit~Dt~R~aA~eQLk~ 273 (432)
T PRK12724 195 NVTERAVTYLEERVSVDSDLFSGTGKNQRKVVFFVGPTGSGKTTSIAKLAAKYF-LHMGKSVSLYTTDNYRIAAIEQLKR 273 (432)
T ss_pred HHHHHHHHHHHHhcccchhhhhhcccCCCeEEEEECCCCCCHHHHHHHHHHHHH-HhcCCeEEEecccchhhhHHHHHHH
Confidence 4566677777777754321 1123333 21 355666665442 4556663 3 444444445555666
Q ss_pred HHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH------cCcEE
Q 037063 243 SSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE------KGWHV 315 (588)
Q Consensus 243 ~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~------~g~~v 315 (588)
+++..|..+..+ .+..++.+.+.. .+..+|++...-...-....++++ ++.+. ...++
T Consensus 274 yAe~lgvp~~~~--------~~~~~l~~~l~~-------~~~D~VLIDTaGr~~rd~~~l~eL~~~~~~~~~~~~~e~~L 338 (432)
T PRK12724 274 YADTMGMPFYPV--------KDIKKFKETLAR-------DGSELILIDTAGYSHRNLEQLERMQSFYSCFGEKDSVENLL 338 (432)
T ss_pred HHHhcCCCeeeh--------HHHHHHHHHHHh-------CCCCEEEEeCCCCCccCHHHHHHHHHHHHhhcCCCCCeEEE
Confidence 777777754322 123455555541 456788888643322222334445 43332 24678
Q ss_pred EEeCCCc
Q 037063 316 LLDATAL 322 (588)
Q Consensus 316 vvDaa~~ 322 (588)
++|++..
T Consensus 339 VLsAt~~ 345 (432)
T PRK12724 339 VLSSTSS 345 (432)
T ss_pred EEeCCCC
Confidence 8888743
No 415
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=36.92 E-value=1.2e+02 Score=29.51 Aligned_cols=73 Identities=10% Similarity=0.023 Sum_probs=45.0
Q ss_pred CchhHHHHHHHHHHhcCCEEEEE-eccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHHH
Q 037063 232 HENEAAALMIESSKKRGARVSSA-EFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAAE 310 (588)
Q Consensus 232 ~~s~~~~~~~~~a~~~G~~v~~v-~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~ 310 (588)
+.......+.+.++..|.++..+ +.. .+..-..+.+++++. .+...|++....... . .+.++.|++
T Consensus 12 ~~~~~~~g~~~~a~~~g~~~~~~~~~~-~d~~~q~~~i~~~i~--------~~~d~Iiv~~~~~~~-~---~~~l~~~~~ 78 (257)
T PF13407_consen 12 FWQQVIKGAKAAAKELGYEVEIVFDAQ-NDPEEQIEQIEQAIS--------QGVDGIIVSPVDPDS-L---APFLEKAKA 78 (257)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEEEST-TTHHHHHHHHHHHHH--------TTESEEEEESSSTTT-T---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCEEEEeCCCC-CCHHHHHHHHHHHHH--------hcCCEEEecCCCHHH-H---HHHHHHHhh
Confidence 44446667788889999999996 433 222223345666665 556666665443211 1 134488999
Q ss_pred cCcEEEE
Q 037063 311 KGWHVLL 317 (588)
Q Consensus 311 ~g~~vvv 317 (588)
.|++|+.
T Consensus 79 ~gIpvv~ 85 (257)
T PF13407_consen 79 AGIPVVT 85 (257)
T ss_dssp TTSEEEE
T ss_pred cCceEEE
Confidence 9998887
No 416
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=36.55 E-value=94 Score=31.13 Aligned_cols=182 Identities=11% Similarity=0.027 Sum_probs=96.1
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCC-CCCCe-EE-EcCCCchhHHHHHHHHHHhcCCEEEEEec--
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPF-YSNPR-LL-TVYDHENEAAALMIESSKKRGARVSSAEF-- 256 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~-~~gd~-ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~-- 256 (588)
.+....+..+.|.-.-..++|.--.+...+.+...++.- +|..+ |+ ...+..| ....|. ..|.+.+.+..
T Consensus 60 ne~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks-~~ksi~----~agfepiiie~i~ 134 (432)
T KOG3843|consen 60 NEFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKS-CFKSII----HAGFEPIIIENIL 134 (432)
T ss_pred HHHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHH-HHHHHH----hcCCCceeeeccc
Confidence 344444555666532222344333334566777777643 23344 44 3445444 333332 24777766643
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCc-cCCHHHH-HHHHHcCcEEEEeCCCcCCC--CCCC--C
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGA-RYSYMWM-SVAAEKGWHVLLDATALGSK--DMDT--L 330 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~-~~pl~~I-~~a~~~g~~vvvDaa~~~~~--d~~~--l 330 (588)
+.++...|.+.+++.+.+ ..+.--|.+.+..|-+.-. ...+++| .+|..|+++-+|..+-.+-. -+.. -
T Consensus 135 d~d~l~tdleav~~~iee-----~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa 209 (432)
T KOG3843|consen 135 DGDELITDLEAVEAIIEE-----LGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAA 209 (432)
T ss_pred cchHHHHhHHHHHHHHHH-----hCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHH
Confidence 223345678888888873 1122233333333322222 2348889 99999999999987733320 0000 0
Q ss_pred CCCCCCCcEEEeccCccCCCCCCceEEEE-EeCcchhcccCCCCC
Q 037063 331 GLSLFKPDFLICSFYKIFGENPSGFGCLF-VKKSSASVLSGSTSS 374 (588)
Q Consensus 331 ~l~~~~~D~vv~S~~K~~G~~P~G~G~L~-v~~~~~~~l~~~~~g 374 (588)
+-.--++|.++-|.-|-|-. |.|..++. .+...++.+...+.|
T Consensus 210 ~~~~grida~vqsldknf~v-pvggaiia~fk~n~iq~iak~ypg 253 (432)
T KOG3843|consen 210 AAECGRIDAFVQSLDKNFMV-PVGGAIIAAFKDNFIQEIAKMYPG 253 (432)
T ss_pred HhhhccHHHHHHHhhhccee-ecchhHhhHhHHHHHHHHHHhCCC
Confidence 11112489999999997776 77633332 355666666666654
No 417
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=36.44 E-value=1.7e+02 Score=31.45 Aligned_cols=118 Identities=11% Similarity=0.189 Sum_probs=67.8
Q ss_pred HHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCC--------CCccCCHHH----
Q 037063 237 AALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKV--------TGARYSYMW---- 304 (588)
Q Consensus 237 ~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~--------tG~~~pl~~---- 304 (588)
...++-.|++.|.....+-+- . ..+.+++.+.+.+ .++.++++...++. .|.+.-+.+
T Consensus 132 ~~QiklRA~RL~~~~~~l~l~-a--Et~~e~I~~~l~~-------~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~ 201 (456)
T COG1066 132 LQQIKLRADRLGLPTNNLYLL-A--ETNLEDIIAELEQ-------EKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAE 201 (456)
T ss_pred HHHHHHHHHHhCCCccceEEe-h--hcCHHHHHHHHHh-------cCCCEEEEeccceeecccccCCCCcHHHHHHHHHH
Confidence 445566778888544333222 1 2577889888874 67888888877554 465555655
Q ss_pred H-HHHHHcCcEEEE------eCCCcCCCCCCCC-C----CC-CCCCcEEEeccCc-cCCCCCCc-eEEEEEeCcchh
Q 037063 305 M-SVAAEKGWHVLL------DATALGSKDMDTL-G----LS-LFKPDFLICSFYK-IFGENPSG-FGCLFVKKSSAS 366 (588)
Q Consensus 305 I-~~a~~~g~~vvv------Daa~~~~~d~~~l-~----l~-~~~~D~vv~S~~K-~~G~~P~G-~G~L~v~~~~~~ 366 (588)
+ ++||++|+.+++ |++=+.|.-++.+ | +. +..-.|=+.-.+| =|| +++ +|++-++..-+.
T Consensus 202 L~~~AK~~~i~~fiVGHVTKeG~IAGPrvLEHmVDtVlyFEGd~~~~~RiLR~vKNRFG--~t~EiGvFeM~~~GL~ 276 (456)
T COG1066 202 LMRLAKTKNIAIFIVGHVTKEGAIAGPRVLEHMVDTVLYFEGDRHSRYRILRSVKNRFG--ATNELGVFEMTENGLR 276 (456)
T ss_pred HHHHHHHcCCeEEEEEEEcccccccCchheeeeeeEEEEEeccCCCceeeeehhcccCC--cccceeEEEEecCCee
Confidence 4 789999988776 3433444222222 1 00 0011222333456 678 444 888887765443
No 418
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=36.09 E-value=4.7e+02 Score=28.31 Aligned_cols=131 Identities=11% Similarity=0.108 Sum_probs=68.8
Q ss_pred hHHHHHHHHHHHHHhCCCC----CCceEEEe-cC---HHHHHHHHHHhCCCCCCCeE--EEcCCCchhHHHHHHHHHHhc
Q 037063 178 SELESKIRKRIMDFMNISE----DDYTLVFT-AN---QSSAFKLLAESYPFYSNPRL--LTVYDHENEAAALMIESSKKR 247 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~----~e~~vvft-~g---~T~al~lv~~s~~~~~gd~l--l~~~e~~s~~~~~~~~~a~~~ 247 (588)
.++...+++.+..+++.+. ....|.|+ ++ =|..+..++..+ ...|.++ +....+-..++..+..+++..
T Consensus 217 ~~~~~~l~~~l~~~l~~~~~~~~~~~vI~LVGptGvGKTTTiaKLA~~L-~~~GkkVglI~aDt~RiaAvEQLk~yae~l 295 (436)
T PRK11889 217 EEVIEYILEDMRSHFNTENVFEKEVQTIALIGPTGVGKTTTLAKMAWQF-HGKKKTVGFITTDHSRIGTVQQLQDYVKTI 295 (436)
T ss_pred HHHHHHHHHHHHHHhccccccccCCcEEEEECCCCCcHHHHHHHHHHHH-HHcCCcEEEEecCCcchHHHHHHHHHhhhc
Confidence 4566677777777776532 11234443 22 233444444444 3456553 344344334565667777788
Q ss_pred CCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH---cCcEEEEeCC
Q 037063 248 GARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE---KGWHVLLDAT 320 (588)
Q Consensus 248 G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~---~g~~vvvDaa 320 (588)
|+.+..+. +.+++.+.|... ....+..+|.+...-...-...-++++ +..+. +.+++++|++
T Consensus 296 gipv~v~~--------d~~~L~~aL~~l---k~~~~~DvVLIDTaGRs~kd~~lm~EL~~~lk~~~PdevlLVLsAT 361 (436)
T PRK11889 296 GFEVIAVR--------DEAAMTRALTYF---KEEARVDYILIDTAGKNYRASETVEEMIETMGQVEPDYICLTLSAS 361 (436)
T ss_pred CCcEEecC--------CHHHHHHHHHHH---HhccCCCEEEEeCccccCcCHHHHHHHHHHHhhcCCCeEEEEECCc
Confidence 87766432 456777777521 001246788887653322222234455 44433 4577888876
No 419
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=35.30 E-value=5.9e+02 Score=27.27 Aligned_cols=129 Identities=15% Similarity=0.135 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHhCCCC------CCceEEEe-cC----HHHHHHHHHHhCCC---CCCCe--EEEcCCCchhHHHHHHH
Q 037063 179 ELESKIRKRIMDFMNISE------DDYTLVFT-AN----QSSAFKLLAESYPF---YSNPR--LLTVYDHENEAAALMIE 242 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~------~e~~vvft-~g----~T~al~lv~~s~~~---~~gd~--ll~~~e~~s~~~~~~~~ 242 (588)
.+.+.+++.+.+.+.... ....|+|. ++ +|.+.+++.. +.. +.|.+ +++...+-..+..++..
T Consensus 149 ~v~~~l~~~l~~~i~~~~~~~~~~~~~vi~lvGptGvGKTTT~aKLA~~-~~~~~~~~g~~V~lit~Dt~R~aa~eQL~~ 227 (388)
T PRK12723 149 KVRDSVIIYIAKTIKCSGSIIDNLKKRVFILVGPTGVGKTTTIAKLAAI-YGINSDDKSLNIKIITIDNYRIGAKKQIQT 227 (388)
T ss_pred HHHHHHHHHHHHHhhccCccccCCCCeEEEEECCCCCCHHHHHHHHHHH-HHhhhccCCCeEEEEeccCccHHHHHHHHH
Confidence 345555666666654321 11224443 22 3444445433 322 23555 34555555556777788
Q ss_pred HHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc----CcEEEE
Q 037063 243 SSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK----GWHVLL 317 (588)
Q Consensus 243 ~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~----g~~vvv 317 (588)
+++..|+.+..+. +.+++.+.+.. . .+..+|++...-........+.++ +..... ..++++
T Consensus 228 ~a~~lgvpv~~~~--------~~~~l~~~L~~----~--~~~DlVLIDTaGr~~~~~~~l~el~~~l~~~~~~~e~~LVl 293 (388)
T PRK12723 228 YGDIMGIPVKAIE--------SFKDLKEEITQ----S--KDFDLVLVDTIGKSPKDFMKLAEMKELLNACGRDAEFHLAV 293 (388)
T ss_pred HhhcCCcceEeeC--------cHHHHHHHHHH----h--CCCCEEEEcCCCCCccCHHHHHHHHHHHHhcCCCCeEEEEE
Confidence 8888888765433 34677777652 1 456788888765544333334565 444432 578888
Q ss_pred eCCCc
Q 037063 318 DATAL 322 (588)
Q Consensus 318 Daa~~ 322 (588)
|++..
T Consensus 294 sat~~ 298 (388)
T PRK12723 294 SSTTK 298 (388)
T ss_pred cCCCC
Confidence 98754
No 420
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=33.03 E-value=4.1e+02 Score=26.67 Aligned_cols=122 Identities=14% Similarity=0.066 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCe--EEEcCCCchhHHHHHHHHHHhcCCEEEEEeccC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPR--LLTVYDHENEAAALMIESSKKRGARVSSAEFAW 258 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~--ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~ 258 (588)
.+.+++.|++..----.+..+|+|-|.+..+..++... ++.|.+ |+.....|..-...+.+.....|..|..++..
T Consensus 90 ~~~~~~~I~~~~~~~I~~~~~ILT~~~S~~v~~~l~~a-~~~~~~~~V~v~es~P~~eG~~~a~~L~~~gi~v~~i~d~- 167 (282)
T PF01008_consen 90 IEQAREKIADHASELINDGDTILTHGYSSTVERFLLSA-KKKGKKFRVIVLESRPYNEGRLMAKELAEAGIPVTLIPDS- 167 (282)
T ss_dssp HHHHHHHHHHHHHCCC-TTEEEEEES--SHHHHHHHHH-HHTTEEEEEEEE--TTTTHHHTHHHHHHHTT-EEEEE-GG-
T ss_pred HHHHHHHHHHHHHHhccCCeEEEEeCCchHHHHHHHHH-HHcCCeEEEEEccCCcchhhhhHHHHhhhcceeEEEEech-
Confidence 44555555554321112234888888777666555543 455544 44322222211122344445679999888643
Q ss_pred CCCccCHHHHHHHHhhhccccCCC-cceEEEEeCCCCCCCcc-CCH--HHH-HHHHHcCcEEEEeCC
Q 037063 259 PNLRIHSGKLMKKIVGKRKKKKKK-KRGLFVFPLQSKVTGAR-YSY--MWM-SVAAEKGWHVLLDAT 320 (588)
Q Consensus 259 ~~~~i~~e~l~~~i~~~~~~~~~~-~t~Lv~~~~~sn~tG~~-~pl--~~I-~~a~~~g~~vvvDaa 320 (588)
.+-..+. . -.++++=...--..|.+ ... ..| -.|++++++|+|=+-
T Consensus 168 --------~~~~~m~--------~~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~~~ 218 (282)
T PF01008_consen 168 --------AVGYVMP--------RDVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVLAE 218 (282)
T ss_dssp --------GHHHHHH--------CTESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE--
T ss_pred --------HHHHHHH--------HhCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEEcc
Confidence 3444444 2 22333333333335533 222 234 567888888777443
No 421
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=32.98 E-value=1.5e+02 Score=30.29 Aligned_cols=70 Identities=13% Similarity=0.194 Sum_probs=51.3
Q ss_pred ceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHh
Q 037063 199 YTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIV 273 (588)
Q Consensus 199 ~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~ 273 (588)
+..-++-|-..|+.++-.-..|++||-|+-.....+ .-...+++|+..|.+.+.|--+ +-+.|+|++.|.
T Consensus 137 ~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~-VG~~ViQlaka~GiktinvVRd----R~~ieel~~~Lk 206 (354)
T KOG0025|consen 137 SAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSG-VGQAVIQLAKALGIKTINVVRD----RPNIEELKKQLK 206 (354)
T ss_pred hhheeccCchHHHHHHHHHHhcCCCCeeeecCcccH-HHHHHHHHHHHhCcceEEEeec----CccHHHHHHHHH
Confidence 346677788889999999888999998774433322 3345578999999988776544 457788888886
No 422
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=32.52 E-value=81 Score=30.17 Aligned_cols=104 Identities=13% Similarity=0.056 Sum_probs=56.7
Q ss_pred HHHHHHHHHhCCCCCCCe--EEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHH-HHHHHhhhccccCCCcc
Q 037063 208 SSAFKLLAESYPFYSNPR--LLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGK-LMKKIVGKRKKKKKKKR 284 (588)
Q Consensus 208 T~al~lv~~s~~~~~gd~--ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~-l~~~i~~~~~~~~~~~t 284 (588)
|.+.++++... .+ |.+ +++...|-...+..++.+++..|+.+..+... .++.+ +.+.+.. ...++.
T Consensus 16 Tt~aKLAa~~~-~~-~~~v~lis~D~~R~ga~eQL~~~a~~l~vp~~~~~~~-----~~~~~~~~~~l~~----~~~~~~ 84 (196)
T PF00448_consen 16 TTIAKLAARLK-LK-GKKVALISADTYRIGAVEQLKTYAEILGVPFYVARTE-----SDPAEIAREALEK----FRKKGY 84 (196)
T ss_dssp HHHHHHHHHHH-HT-T--EEEEEESTSSTHHHHHHHHHHHHHTEEEEESSTT-----SCHHHHHHHHHHH----HHHTTS
T ss_pred hHHHHHHHHHh-hc-cccceeecCCCCCccHHHHHHHHHHHhccccchhhcc-----hhhHHHHHHHHHH----HhhcCC
Confidence 55666666544 44 666 45665666678889999999999888775432 13322 3344431 111456
Q ss_pred eEEEEeCCCCCCCccCCHHHH-H---HHHHcCcEEEEeCCCc
Q 037063 285 GLFVFPLQSKVTGARYSYMWM-S---VAAEKGWHVLLDATAL 322 (588)
Q Consensus 285 ~Lv~~~~~sn~tG~~~pl~~I-~---~a~~~g~~vvvDaa~~ 322 (588)
.+|.+...-...-...-++++ + ......+++++|+...
T Consensus 85 D~vlIDT~Gr~~~d~~~~~el~~~~~~~~~~~~~LVlsa~~~ 126 (196)
T PF00448_consen 85 DLVLIDTAGRSPRDEELLEELKKLLEALNPDEVHLVLSATMG 126 (196)
T ss_dssp SEEEEEE-SSSSTHHHHHHHHHHHHHHHSSSEEEEEEEGGGG
T ss_pred CEEEEecCCcchhhHHHHHHHHHHhhhcCCccceEEEecccC
Confidence 688887642211111113333 2 2333468888888743
No 423
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=32.47 E-value=4.1e+02 Score=27.83 Aligned_cols=119 Identities=8% Similarity=-0.040 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHhCCCCC-CceEEEecCHHHHHHHH---HHhCCCCCCCe-E-E-EcCCCchh-HHHHHHHHHHhcCCEEE
Q 037063 181 ESKIRKRIMDFMNISED-DYTLVFTANQSSAFKLL---AESYPFYSNPR-L-L-TVYDHENE-AAALMIESSKKRGARVS 252 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~-e~~vvft~g~T~al~lv---~~s~~~~~gd~-l-l-~~~e~~s~-~~~~~~~~a~~~G~~v~ 252 (588)
..++++.+.++-+.... -+.||-.||+-.+.-++ ..-+ |.+ + + .+..+.+. ....+.++++..|+...
T Consensus 42 ~~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~~~----gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~ 117 (343)
T TIGR03573 42 EKELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKKKL----GLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLH 117 (343)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHHHh----CCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeE
Confidence 34555555555443322 23466667775544433 2233 333 3 2 23333221 33355778888999998
Q ss_pred EEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCC
Q 037063 253 SAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATA 321 (588)
Q Consensus 253 ~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~ 321 (588)
.+.++ .+.+...+.. ... ....+..... ......+ +.|+++|+.+|+.+..
T Consensus 118 ~i~~d-------~~~~~~l~~~--------~~~--~~~~pc~~c~-~~~~~~l~~~A~~~gi~~Il~G~~ 169 (343)
T TIGR03573 118 TITIN-------PETFRKLQRA--------YFK--KVGDPEWPQD-HAIFASVYQVALKFNIPLIIWGEN 169 (343)
T ss_pred EEeCC-------HHHHHHHHHH--------HHh--ccCCCchhhh-hHHHHHHHHHHHHhCCCEEEeCCC
Confidence 88765 2344433321 000 0111111111 1224445 8999999999999874
No 424
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=32.44 E-value=4.9e+02 Score=26.43 Aligned_cols=114 Identities=11% Similarity=0.092 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhC--CCCCCceEEEecC-HHHHHHHHHHhCCCCCCCe--EEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 182 SKIRKRIMDFMN--ISEDDYTLVFTAN-QSSAFKLLAESYPFYSNPR--LLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 182 ~~~r~~ia~~lg--a~~~e~~vvft~g-~T~al~lv~~s~~~~~gd~--ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.+++++|+++-- +.+++ +|+|-+ +..++..+..+ .+.|.+ |+....-|..-...+.......|+.+..++-
T Consensus 93 ~~~~~~I~~~a~~~I~~g~--~ILTh~~S~tv~~~l~~A--~~~gk~~~V~v~EsrP~~qG~~la~eL~~~GI~vtlI~D 168 (275)
T PRK08335 93 EEAKREIGNIGSELIDDGD--VIITHSFSSAVLEILKTA--KRKGKRFKVILTESAPDYEGLALANELEFLGIEFEVITD 168 (275)
T ss_pred HHHHHHHHHHHHHHcCCCC--EEEEECCcHHHHHHHHHH--HHcCCceEEEEecCCCchhHHHHHHHHHHCCCCEEEEec
Confidence 455555544321 12233 677755 44455555444 344543 5443333321112223444567998888753
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEE-eCCCCCCCccC-CHHH--H-HHHHHcCcEEEE
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVF-PLQSKVTGARY-SYMW--M-SVAAEKGWHVLL 317 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~-~~~sn~tG~~~-pl~~--I-~~a~~~g~~vvv 317 (588)
. .+-..+. +...|++ ...-...|... .+-- + -+||.+|++|+|
T Consensus 169 s---------a~~~~m~---------~vd~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 169 A---------QLGLFAK---------EATLALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred c---------HHHHHHH---------hCCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 2 1222222 1223333 22222345333 3332 4 568899999998
No 425
>PLN02672 methionine S-methyltransferase
Probab=31.73 E-value=1.5e+02 Score=36.08 Aligned_cols=125 Identities=16% Similarity=0.137 Sum_probs=68.3
Q ss_pred HHHHHHHHHh----CCCCCCceEEEecCHHHHHHHHHHhCCCC--CCCeEEEcCCCchhHHHHHHHHHHhc-------CC
Q 037063 183 KIRKRIMDFM----NISEDDYTLVFTANQSSAFKLLAESYPFY--SNPRLLTVYDHENEAAALMIESSKKR-------GA 249 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~~--~gd~ll~~~e~~s~~~~~~~~~a~~~-------G~ 249 (588)
..|..||.|+ +++-.+.+|++-++...|+.-+++-|..+ -=|+-++..-. -.|+..++... +.
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 505 (1082)
T PLN02672 430 RFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP----KKWLTSLAIENATSDSKSDD 505 (1082)
T ss_pred HHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC----HHHHhHhhhhcccccCccCC
Confidence 5667776654 56545556999999999998777765211 01111222111 23544333221 23
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcC
Q 037063 250 RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALG 323 (588)
Q Consensus 250 ~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~ 323 (588)
.+..+... . ..+.+.++|+. -++++|+.......-=+..-.+.| ..+++.|+.+++|....+
T Consensus 506 ~~~~~~~~--~---~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1082)
T PLN02672 506 VITVIEAP--R---QSDLVIELIKK-------LKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISDHL 568 (1082)
T ss_pred eEEEEeCC--C---cchHHHHHHHh-------CCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhhhe
Confidence 33333321 1 22456677762 356777665553322222234456 888999999999987433
No 426
>PF09791 Oxidored-like: Oxidoreductase-like protein, N-terminal; InterPro: IPR019180 This entry represents the N-terminal domain of various oxidoreductase-like proteins whose exact function is, as yet, unknown.
Probab=30.97 E-value=29 Score=25.22 Aligned_cols=12 Identities=42% Similarity=0.999 Sum_probs=9.5
Q ss_pred ccccccCCCcCC
Q 037063 10 LSEACCRGCCPN 21 (588)
Q Consensus 10 ~~~~~~~~~~~~ 21 (588)
++..|++||.+=
T Consensus 15 p~~CCgSGC~~C 26 (48)
T PF09791_consen 15 PDECCGSGCAPC 26 (48)
T ss_pred cccccccCCccc
Confidence 478899999763
No 427
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=29.97 E-value=4.2e+02 Score=28.82 Aligned_cols=130 Identities=9% Similarity=0.079 Sum_probs=66.5
Q ss_pred hHHHHHHHHHHHHHhCCCC-------CCceEEEecC------HHHHHHHHHHhCCCCCCCe-EEEcCC-CchhHHHHHHH
Q 037063 178 SELESKIRKRIMDFMNISE-------DDYTLVFTAN------QSSAFKLLAESYPFYSNPR-LLTVYD-HENEAAALMIE 242 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~-------~e~~vvft~g------~T~al~lv~~s~~~~~gd~-ll~~~e-~~s~~~~~~~~ 242 (588)
..++..+.+.+.++++-.. ..-.|++..| +|.+.+++.... .+.|.+ ++.+.| +-+.....+..
T Consensus 71 ~~~~~~v~~eL~~~l~~~~~~~~~~~~~p~vi~~vG~~GsGKTTtaakLA~~l~-~~~g~kV~lV~~D~~R~~a~~QL~~ 149 (428)
T TIGR00959 71 QQFIKIVHEELVAILGGENASLNLAKKPPTVILMVGLQGSGKTTTCGKLAYYLK-KKQGKKVLLVACDLYRPAAIEQLKV 149 (428)
T ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCCCEEEEEECCCCCcHHHHHHHHHHHHH-HhCCCeEEEEeccccchHHHHHHHH
Confidence 4566777777888776421 1123555544 355666665522 234666 344444 33334444556
Q ss_pred HHHhcCCEEEEEeccCCCCccCHHHHH-HHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH----HHHHHcCcE
Q 037063 243 SSKKRGARVSSAEFAWPNLRIHSGKLM-KKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM----SVAAEKGWH 314 (588)
Q Consensus 243 ~a~~~G~~v~~v~~~~~~~~i~~e~l~-~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I----~~a~~~g~~ 314 (588)
+++..|+.+...+. .-++.++. +.+. ........+|++...-... .+ ++++ ..++..+++
T Consensus 150 ~a~~~gvp~~~~~~-----~~~P~~i~~~al~----~~~~~~~DvVIIDTaGr~~---~d~~l~~eL~~i~~~~~p~e~l 217 (428)
T TIGR00959 150 LGQQVGVPVFALGK-----GQSPVEIARRALE----YAKENGFDVVIVDTAGRLQ---IDEELMEELAAIKEILNPDEIL 217 (428)
T ss_pred HHHhcCCceEecCC-----CCCHHHHHHHHHH----HHHhcCCCEEEEeCCCccc---cCHHHHHHHHHHHHhhCCceEE
Confidence 67777877665432 12343332 2332 1111456788887542211 12 2233 223346889
Q ss_pred EEEeCC
Q 037063 315 VLLDAT 320 (588)
Q Consensus 315 vvvDaa 320 (588)
+|+|+.
T Consensus 218 LVvda~ 223 (428)
T TIGR00959 218 LVVDAM 223 (428)
T ss_pred EEEecc
Confidence 999976
No 428
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=29.54 E-value=4.6e+02 Score=25.40 Aligned_cols=98 Identities=11% Similarity=0.024 Sum_probs=59.8
Q ss_pred cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HH
Q 037063 229 VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SV 307 (588)
Q Consensus 229 ~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~ 307 (588)
..|.|.--..-+..+.+..|.+|+++..+ +.++++.+.+.+ .++.+|.++...+. ....+..+ +.
T Consensus 97 ~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~-----vp~e~~v~~~~~-------~~~~~V~lS~~~~~--~~~~~~~~i~~ 162 (213)
T cd02069 97 KGDVHDIGKNLVGVILSNNGYEVIDLGVM-----VPIEKILEAAKE-------HKADIIGLSGLLVP--SLDEMVEVAEE 162 (213)
T ss_pred CCchhHHHHHHHHHHHHhCCCEEEECCCC-----CCHHHHHHHHHH-------cCCCEEEEccchhc--cHHHHHHHHHH
Confidence 44555422222345567899999998765 678888888873 67888888766432 23344444 55
Q ss_pred HHHc--CcEEEEeCCCcCCCC------CCCCCCCCCCCcEEEeccC
Q 037063 308 AAEK--GWHVLLDATALGSKD------MDTLGLSLFKPDFLICSFY 345 (588)
Q Consensus 308 a~~~--g~~vvvDaa~~~~~d------~~~l~l~~~~~D~vv~S~~ 345 (588)
.++. ++.|++=++..-..- ...+| +|++.-+..
T Consensus 163 L~~~~~~~~i~vGG~~~~~~~~~~~~~~~~~g-----ad~y~~da~ 203 (213)
T cd02069 163 MNRRGIKIPLLIGGAATSRKHTAVKIAPEYDG-----PVVYVKDAS 203 (213)
T ss_pred HHhcCCCCeEEEEChhcCHHHHhhhhccccCC-----CceEecCHH
Confidence 5655 577887776433200 12345 788776543
No 429
>smart00857 Resolvase Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.
Probab=28.83 E-value=2.5e+02 Score=24.77 Aligned_cols=77 Identities=9% Similarity=0.022 Sum_probs=45.8
Q ss_pred HHHHHHHHhcCCEEEEEeccC-CCCc-cCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcE
Q 037063 238 ALMIESSKKRGARVSSAEFAW-PNLR-IHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWH 314 (588)
Q Consensus 238 ~~~~~~a~~~G~~v~~v~~~~-~~~~-i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~ 314 (588)
..+.++|+..|..+..+-.+. ..+. .+-..+.++|.. ........|++...+...=....+..+ ..++++|+.
T Consensus 22 ~~~~~~a~~~g~~i~~~~~d~~~Sg~~~~Rp~l~~ll~~----~~~g~~~~ivv~~~~Rl~R~~~~~~~~~~~l~~~gi~ 97 (148)
T smart00857 22 EALRAYAKANGWEVVRIYEDEGVSGKKADRPGLQRLLAD----LRAGDIDVLVVYKLDRLGRSLRDLLALLELLEKKGVR 97 (148)
T ss_pred HHHHHHHHHCCCEEEEEEEeCCCcCCCCCCHHHHHHHHH----HHcCCCCEEEEeccchhhCcHHHHHHHHHHHHHCCCE
Confidence 345677888898875543332 1221 233456666651 112345688888888766554455555 788889988
Q ss_pred EEEe
Q 037063 315 VLLD 318 (588)
Q Consensus 315 vvvD 318 (588)
|++-
T Consensus 98 l~~~ 101 (148)
T smart00857 98 LVSV 101 (148)
T ss_pred EEEC
Confidence 7753
No 430
>PRK15408 autoinducer 2-binding protein lsrB; Provisional
Probab=28.29 E-value=2.7e+02 Score=28.99 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=41.6
Q ss_pred CCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHH
Q 037063 230 YDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAA 309 (588)
Q Consensus 230 ~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~ 309 (588)
.+|.......+.+.+++.|.++........+..-..+.++.++. .+...|++... ...+. -..++.++
T Consensus 35 ~pf~~~~~~Gi~~aa~~~G~~v~~~~~~~~d~~~q~~~i~~li~--------~~vdgIiv~~~-d~~al---~~~l~~a~ 102 (336)
T PRK15408 35 VGFFTSGGNGAKEAGKELGVDVTYDGPTEPSVSGQVQLINNFVN--------QGYNAIIVSAV-SPDGL---CPALKRAM 102 (336)
T ss_pred CHHHHHHHHHHHHHHHHhCCEEEEECCCCCCHHHHHHHHHHHHH--------cCCCEEEEecC-CHHHH---HHHHHHHH
Confidence 34555555667788889999987632111111112234555665 55666666422 11110 12347788
Q ss_pred HcCcEEEE
Q 037063 310 EKGWHVLL 317 (588)
Q Consensus 310 ~~g~~vvv 317 (588)
+.|++|+.
T Consensus 103 ~~gIpVV~ 110 (336)
T PRK15408 103 QRGVKVLT 110 (336)
T ss_pred HCCCeEEE
Confidence 89998765
No 431
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=27.95 E-value=95 Score=29.61 Aligned_cols=67 Identities=12% Similarity=0.044 Sum_probs=44.3
Q ss_pred CHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC-CCCCCCCCCCCCCcEEE
Q 037063 264 HSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS-KDMDTLGLSLFKPDFLI 341 (588)
Q Consensus 264 ~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~-~d~~~l~l~~~~~D~vv 341 (588)
..+++++++. -...+|++..-..+-- .+++++ +.+|+++.+++-|.+..-- .....+| +|++.
T Consensus 53 T~~ev~~l~~--------aGadIIAlDaT~R~Rp--~~l~~li~~i~~~~~l~MADist~ee~~~A~~~G-----~D~I~ 117 (192)
T PF04131_consen 53 TLKEVDALAE--------AGADIIALDATDRPRP--ETLEELIREIKEKYQLVMADISTLEEAINAAELG-----FDIIG 117 (192)
T ss_dssp SHHHHHHHHH--------CT-SEEEEE-SSSS-S--S-HHHHHHHHHHCTSEEEEE-SSHHHHHHHHHTT------SEEE
T ss_pred CHHHHHHHHH--------cCCCEEEEecCCCCCC--cCHHHHHHHHHHhCcEEeeecCCHHHHHHHHHcC-----CCEEE
Confidence 5678888887 6778888888666555 778888 8899999999999875442 2245566 89988
Q ss_pred eccC
Q 037063 342 CSFY 345 (588)
Q Consensus 342 ~S~~ 345 (588)
+..+
T Consensus 118 TTLs 121 (192)
T PF04131_consen 118 TTLS 121 (192)
T ss_dssp -TTT
T ss_pred cccc
Confidence 7743
No 432
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=27.56 E-value=3.8e+02 Score=22.70 Aligned_cols=81 Identities=7% Similarity=0.042 Sum_probs=49.7
Q ss_pred cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCcc-CCHHHH-H
Q 037063 229 VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGAR-YSYMWM-S 306 (588)
Q Consensus 229 ~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~-~pl~~I-~ 306 (588)
..+.|......+...+++.|.++..+..+ ...+++.+.+.+ .++.+|.++... ... ..++.+ .
T Consensus 8 ~~~~h~lg~~~~~~~l~~~G~~v~~l~~~-----~~~~~~~~~i~~-------~~pdiV~iS~~~---~~~~~~~~~~~~ 72 (125)
T cd02065 8 GGDVHDIGKNIVAIALRDNGFEVIDLGVD-----VPPEEIVEAAKE-------EDADVVGLSALS---TTHMEAMKLVIE 72 (125)
T ss_pred CCchhhHHHHHHHHHHHHCCCEEEEcCCC-----CCHHHHHHHHHH-------cCCCEEEEecch---HhHHHHHHHHHH
Confidence 34445433334456678899999987543 455777777762 578899887543 222 223334 4
Q ss_pred HHHHc--CcEEEEeCCCcCC
Q 037063 307 VAAEK--GWHVLLDATALGS 324 (588)
Q Consensus 307 ~a~~~--g~~vvvDaa~~~~ 324 (588)
+.+++ ++.+++=+.+...
T Consensus 73 ~~~~~p~~~~ivvGG~~~t~ 92 (125)
T cd02065 73 ALKELGIDIPVVVGGAHPTA 92 (125)
T ss_pred HHHhcCCCCeEEEeCCcCCc
Confidence 44555 5889888875553
No 433
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=27.47 E-value=4.8e+02 Score=26.23 Aligned_cols=113 Identities=16% Similarity=0.228 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHH-H-HHHHhCCCCCCCeEE---EcCCCchh-HHHHHHHHHHhcCCEEE
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAF-K-LLAESYPFYSNPRLL---TVYDHENE-AAALMIESSKKRGARVS 252 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al-~-lv~~s~~~~~gd~ll---~~~e~~s~-~~~~~~~~a~~~G~~v~ 252 (588)
+.+++++..|.+...+ -|.|..|..+.+ - ++.+.+ |++++ .+.++-.. ...-....|+..|++..
T Consensus 5 ~Kl~~l~~~ik~~~kv-----~vAfSGGvDSslLa~la~~~l----G~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~ 75 (269)
T COG1606 5 SKLERLKKAIKEKKKV-----VVAFSGGVDSSLLAKLAKEAL----GDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHE 75 (269)
T ss_pred HHHHHHHHHHhhcCeE-----EEEecCCccHHHHHHHHHHHh----ccceEEEEEecCCCChhhhhHHHHHHHHhCCcce
Confidence 3456677777665543 266666653332 2 222444 67632 23333221 33334677888999999
Q ss_pred EEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcC
Q 037063 253 SAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALG 323 (588)
Q Consensus 253 ~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~ 323 (588)
+++++ .+++ ++. .+ +.+..-++ .+.=++-| +.|+++|..+|+|++-+-
T Consensus 76 ~i~~~----~~~~-~~~---~n------~~~rCY~C---------K~~v~~~l~~~a~~~Gyd~V~dGtNas 124 (269)
T COG1606 76 FIKMN----RMDP-EFK---EN------PENRCYLC---------KRAVYSTLVEEAEKRGYDVVADGTNAS 124 (269)
T ss_pred eeehh----hcch-hhc---cC------CCCcchHH---------HHHHHHHHHHHHHHcCCCEEEeCCcHH
Confidence 99875 2221 111 00 01111111 11113345 889999999999998444
No 434
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=27.12 E-value=3.8e+02 Score=22.79 Aligned_cols=66 Identities=18% Similarity=0.149 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.+.-+.|++-||++.- -.+=+|--|+-..+++-.| ++|+.. .+.+ -+.-+..+|+.+|+.|...+-
T Consensus 22 ~~~v~~i~~~~gI~di---N~IKPGIgEaTRvLLRRvP----~~vLVr~~~~p--d~~Hl~~LA~ekgVpVe~~~d 88 (100)
T PF15608_consen 22 WAEVERIAERYGISDI---NLIKPGIGEATRVLLRRVP----WKVLVRDPDDP--DLAHLLLLAEEKGVPVEVYPD 88 (100)
T ss_pred HHHHHHHHHHhCCCCc---ccccCChhHHHHHHHhcCC----CEEEECCCCCc--cHHHHHHHHHHcCCcEEEeCC
Confidence 3667788999999621 3556899999999988776 465543 3444 344567899999999988764
No 435
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=27.01 E-value=1.8e+02 Score=29.27 Aligned_cols=62 Identities=11% Similarity=0.094 Sum_probs=41.5
Q ss_pred CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCcc---CCHHHHHHHHHcCcEEEEeCCCcCC
Q 037063 259 PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGAR---YSYMWMSVAAEKGWHVLLDATALGS 324 (588)
Q Consensus 259 ~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~---~pl~~I~~a~~~g~~vvvDaa~~~~ 324 (588)
....++++++...... -....+..++.+.--.++ |.. .|+..+...++.+.+|++|.+|++.
T Consensus 131 rG~~~t~~e~~~aaey---i~~~Gn~~vilcERG~tf-~y~r~~~D~~~vp~~k~~~lPVi~DpSHsvq 195 (264)
T PRK05198 131 KGQFLAPWDMKNVVDK---VREAGNDKIILCERGTSF-GYNNLVVDMRGLPIMRETGAPVIFDATHSVQ 195 (264)
T ss_pred CCCcCCHHHHHHHHHH---HHHcCCCeEEEEeCCCCc-CCCCeeechhhhHHHhhCCCCEEEeCCcccc
Confidence 3345777877666541 111245677776666554 443 5777787888889999999999875
No 436
>PRK14974 cell division protein FtsY; Provisional
Probab=26.63 E-value=4.2e+02 Score=27.72 Aligned_cols=133 Identities=11% Similarity=0.153 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHhCCCC------------CCceEEEec----CHHHHHHHHHHhCCCCCCCeE-EEcCC-CchhHHHHH
Q 037063 179 ELESKIRKRIMDFMNISE------------DDYTLVFTA----NQSSAFKLLAESYPFYSNPRL-LTVYD-HENEAAALM 240 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~------------~e~~vvft~----g~T~al~lv~~s~~~~~gd~l-l~~~e-~~s~~~~~~ 240 (588)
.+.+.+++.+.++++..+ ..+.|+|+. |=|..+..++..+ .+.|.++ +...+ +-.....++
T Consensus 109 ~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~vi~~~G~~GvGKTTtiakLA~~l-~~~g~~V~li~~Dt~R~~a~eqL 187 (336)
T PRK14974 109 IVKNALKEALLEVLSVGDLFDLIEEIKSKGKPVVIVFVGVNGTGKTTTIAKLAYYL-KKNGFSVVIAAGDTFRAGAIEQL 187 (336)
T ss_pred HHHHHHHHHHHHHhCCCcchhhhhhhhccCCCeEEEEEcCCCCCHHHHHHHHHHHH-HHcCCeEEEecCCcCcHHHHHHH
Confidence 356677888888776432 123455553 3355555555555 3445553 44434 333355566
Q ss_pred HHHHHhcCCEEEEEeccCCCCccCHHH-HHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEE
Q 037063 241 IESSKKRGARVSSAEFAWPNLRIHSGK-LMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHV 315 (588)
Q Consensus 241 ~~~a~~~G~~v~~v~~~~~~~~i~~e~-l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~v 315 (588)
..+++..|+.+..... ..++.. +.+.+.. ....+..+|++...-.......-++++ +.++...+++
T Consensus 188 ~~~a~~lgv~v~~~~~-----g~dp~~v~~~ai~~----~~~~~~DvVLIDTaGr~~~~~~lm~eL~~i~~~~~pd~~iL 258 (336)
T PRK14974 188 EEHAERLGVKVIKHKY-----GADPAAVAYDAIEH----AKARGIDVVLIDTAGRMHTDANLMDELKKIVRVTKPDLVIF 258 (336)
T ss_pred HHHHHHcCCceecccC-----CCCHHHHHHHHHHH----HHhCCCCEEEEECCCccCCcHHHHHHHHHHHHhhCCceEEE
Confidence 7788888887654322 123332 2233321 111344578887653322111113333 2233356677
Q ss_pred EEeCCC
Q 037063 316 LLDATA 321 (588)
Q Consensus 316 vvDaa~ 321 (588)
++|+..
T Consensus 259 Vl~a~~ 264 (336)
T PRK14974 259 VGDALA 264 (336)
T ss_pred eecccc
Confidence 888753
No 437
>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=26.11 E-value=8.6e+02 Score=26.31 Aligned_cols=127 Identities=12% Similarity=0.117 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHhCCCCCC-----ceEEEec-C----HHHHHHHHHHhCCCCCCCeE--EEcCCCchhHHHHHHHHHHhc
Q 037063 180 LESKIRKRIMDFMNISEDD-----YTLVFTA-N----QSSAFKLLAESYPFYSNPRL--LTVYDHENEAAALMIESSKKR 247 (588)
Q Consensus 180 ~~~~~r~~ia~~lga~~~e-----~~vvft~-g----~T~al~lv~~s~~~~~gd~l--l~~~e~~s~~~~~~~~~a~~~ 247 (588)
....+++.+.+.+...+.+ ..++|+. + +|.+.++++.....+.|.+| ++...+-+..+..+..+++..
T Consensus 198 ~~~~~~~~L~~~l~~~~~~~~~~~~~i~~vGptGvGKTTt~~kLA~~~~~~~~g~~V~li~~D~~r~~a~eqL~~~a~~~ 277 (424)
T PRK05703 198 AWRYLLELLANMIPVRVEDILKQGGVVALVGPTGVGKTTTLAKLAARYALLYGKKKVALITLDTYRIGAVEQLKTYAKIM 277 (424)
T ss_pred HHHHHHHHHHHHhCccccccccCCcEEEEECCCCCCHHHHHHHHHHHHHHhcCCCeEEEEECCccHHHHHHHHHHHHHHh
Confidence 5567777788877754321 2344442 2 34555555543212445553 344444333444556667777
Q ss_pred CCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHH----HcCcEEEEeCC
Q 037063 248 GARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAA----EKGWHVLLDAT 320 (588)
Q Consensus 248 G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~----~~g~~vvvDaa 320 (588)
|+.+..+ .+.+++.+.|... .+..+|++...-...-...-++++ ++.+ ....++++++.
T Consensus 278 ~vp~~~~--------~~~~~l~~~l~~~------~~~DlVlIDt~G~~~~d~~~~~~L~~ll~~~~~~~~~~LVl~a~ 341 (424)
T PRK05703 278 GIPVEVV--------YDPKELAKALEQL------RDCDVILIDTAGRSQRDKRLIEELKALIEFSGEPIDVYLVLSAT 341 (424)
T ss_pred CCceEcc--------CCHHhHHHHHHHh------CCCCEEEEeCCCCCCCCHHHHHHHHHHHhccCCCCeEEEEEECC
Confidence 7665433 2345667666521 346888888653322222223344 4443 12457778875
No 438
>PLN03033 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=26.11 E-value=1.8e+02 Score=29.55 Aligned_cols=62 Identities=10% Similarity=-0.050 Sum_probs=40.7
Q ss_pred CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCcc---CCHHHHHHHHHcCcEEEEeCCCcCC
Q 037063 259 PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGAR---YSYMWMSVAAEKGWHVLLDATALGS 324 (588)
Q Consensus 259 ~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~---~pl~~I~~a~~~g~~vvvDaa~~~~ 324 (588)
.....+++++...+.. -....+.+++.+.--.++ |.- .|+..+.+.++.+.+||+|.+|++-
T Consensus 137 kGq~~t~~e~~~aaek---i~~~GN~~viLcERG~tF-gy~~lv~D~r~ip~mk~~~lPVI~DpSHsvQ 201 (290)
T PLN03033 137 KGQFCAPSVMRNSAEK---VRLAGNPNVMVCERGTMF-GYNDLIVDPRNLEWMREANCPVVADITHSLQ 201 (290)
T ss_pred CCCCCCHHHHHHHHHH---HHHcCCCcEEEEeCCCCc-CCCCcccchhhhHHHHhcCCCEEEeCCcccc
Confidence 3445778887766651 111245666666655544 443 5777776777899999999999873
No 439
>PRK01964 4-oxalocrotonate tautomerase; Provisional
Probab=25.11 E-value=92 Score=23.58 Aligned_cols=32 Identities=13% Similarity=0.264 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHH
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSS 209 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~ 209 (588)
..+.+.+-+.+++.+|+++++..|+++....+
T Consensus 18 ~~l~~~it~~l~~~lg~p~~~v~V~i~e~~~~ 49 (64)
T PRK01964 18 KNLIREVTEAISATLDVPKERVRVIVNEVPSS 49 (64)
T ss_pred HHHHHHHHHHHHHHhCcChhhEEEEEEEcChH
Confidence 67888889999999999988766777655443
No 440
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=24.98 E-value=3.1e+02 Score=24.59 Aligned_cols=70 Identities=10% Similarity=0.056 Sum_probs=45.6
Q ss_pred cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HH
Q 037063 229 VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SV 307 (588)
Q Consensus 229 ~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~ 307 (588)
..|.|.--.+-+....+..|.+|+.+..+ +.++++.++..+ .+..+|.++... +.....+.++ +.
T Consensus 10 ~~D~HdiGk~iv~~~l~~~GfeVi~LG~~-----v~~e~~v~aa~~-------~~adiVglS~l~--~~~~~~~~~~~~~ 75 (134)
T TIGR01501 10 GSDCHAVGNKILDHAFTNAGFNVVNLGVL-----SPQEEFIKAAIE-------TKADAILVSSLY--GHGEIDCKGLRQK 75 (134)
T ss_pred cCChhhHhHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHH-------cCCCEEEEeccc--ccCHHHHHHHHHH
Confidence 34445422233355668899999998775 567887777653 678889887664 3333346666 77
Q ss_pred HHHcC
Q 037063 308 AAEKG 312 (588)
Q Consensus 308 a~~~g 312 (588)
+++.|
T Consensus 76 l~~~g 80 (134)
T TIGR01501 76 CDEAG 80 (134)
T ss_pred HHHCC
Confidence 77765
No 441
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=24.69 E-value=1.3e+02 Score=29.08 Aligned_cols=69 Identities=12% Similarity=0.124 Sum_probs=47.2
Q ss_pred HHHHHHHHhhhccccCCCcceEEEEeCCCC--CCCccCCHHHH-HHHHHcCcEEEEeCCCcC-CCCCCCCCCCCCCCcEE
Q 037063 265 SGKLMKKIVGKRKKKKKKKRGLFVFPLQSK--VTGARYSYMWM-SVAAEKGWHVLLDATALG-SKDMDTLGLSLFKPDFL 340 (588)
Q Consensus 265 ~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn--~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~-~~d~~~l~l~~~~~D~v 340 (588)
+++++++.. ....+|++..... +.| +++++ +..|..|.+++-|.+..- +.....+| +||+
T Consensus 88 lkeVd~L~~--------~Ga~IIA~DaT~R~RP~~---~~~~~i~~~k~~~~l~MAD~St~ee~l~a~~~G-----~D~I 151 (229)
T COG3010 88 LKEVDALAE--------AGADIIAFDATDRPRPDG---DLEELIARIKYPGQLAMADCSTFEEGLNAHKLG-----FDII 151 (229)
T ss_pred HHHHHHHHH--------CCCcEEEeecccCCCCcc---hHHHHHHHhhcCCcEEEeccCCHHHHHHHHHcC-----CcEE
Confidence 466666666 5667777766543 455 78887 778889999999988544 23345667 8998
Q ss_pred EeccCccCC
Q 037063 341 ICSFYKIFG 349 (588)
Q Consensus 341 v~S~~K~~G 349 (588)
-+..+=.-+
T Consensus 152 GTTLsGYT~ 160 (229)
T COG3010 152 GTTLSGYTG 160 (229)
T ss_pred ecccccccC
Confidence 776655444
No 442
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=24.62 E-value=3.8e+02 Score=26.78 Aligned_cols=118 Identities=4% Similarity=-0.003 Sum_probs=64.6
Q ss_pred HHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeE-EEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCC-cc
Q 037063 186 KRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRL-LTVYDHENEAAALMIESSKKRGARVSSAEFAWPNL-RI 263 (588)
Q Consensus 186 ~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~l-l~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~-~i 263 (588)
..+++-+|.+ ++-+.--...+..+.+.. |-+ +-..+.- ..+.+ +.+.+.|..| .+ ..| ..
T Consensus 72 ~~~~~~~Gl~-----~~Tev~d~~~v~~~~e~v-----dilqIgs~~~~--n~~LL-~~va~tgkPV-il----k~G~~~ 133 (250)
T PRK13397 72 HEVCQEFGLL-----SVSEIMSERQLEEAYDYL-----DVIQVGARNMQ--NFEFL-KTLSHIDKPI-LF----KRGLMA 133 (250)
T ss_pred HHHHHHcCCC-----EEEeeCCHHHHHHHHhcC-----CEEEECccccc--CHHHH-HHHHccCCeE-EE----eCCCCC
Confidence 4446667774 666666667778887733 322 1111211 12333 3334455433 33 345 67
Q ss_pred CHHHHHHHHhhhccccCCCcceEEEEe-CCC---CCCCccCCHHHHHHHHH-cCcEEEEeCCCcCC
Q 037063 264 HSGKLMKKIVGKRKKKKKKKRGLFVFP-LQS---KVTGARYSYMWMSVAAE-KGWHVLLDATALGS 324 (588)
Q Consensus 264 ~~e~l~~~i~~~~~~~~~~~t~Lv~~~-~~s---n~tG~~~pl~~I~~a~~-~g~~vvvDaa~~~~ 324 (588)
++++++.++.. -....+..++.+. ..+ +.+-...++..|...++ .+.+|++|.+|..+
T Consensus 134 t~~e~~~A~e~---i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G 196 (250)
T PRK13397 134 TIEEYLGALSY---LQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTG 196 (250)
T ss_pred CHHHHHHHHHH---HHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCc
Confidence 88888888762 1111344555554 222 22223567777844444 89999999998877
No 443
>smart00642 Aamy Alpha-amylase domain.
Probab=24.29 E-value=57 Score=30.32 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=27.0
Q ss_pred EEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCC
Q 037063 287 FVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDAT 320 (588)
Q Consensus 287 v~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa 320 (588)
.-+..+....|..-+++.+ +.||++|+.|++|.+
T Consensus 57 ~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 57 SDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred cccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3333444457888889988 999999999999987
No 444
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=24.24 E-value=5.4e+02 Score=26.00 Aligned_cols=50 Identities=20% Similarity=0.245 Sum_probs=32.6
Q ss_pred HHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC
Q 037063 240 MIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS 301 (588)
Q Consensus 240 ~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p 301 (588)
+...+++.|...+++-.. + -+.+.|++... ...+.+.+-...-.||...+
T Consensus 139 ~~~~~~~~gi~~I~lvaP--t--t~~~rl~~i~~--------~a~GFiY~vs~~GvTG~~~~ 188 (265)
T COG0159 139 LLKAAEKHGIDPIFLVAP--T--TPDERLKKIAE--------AASGFIYYVSRMGVTGARNP 188 (265)
T ss_pred HHHHHHHcCCcEEEEeCC--C--CCHHHHHHHHH--------hCCCcEEEEecccccCCCcc
Confidence 366778888887766432 1 24455555554 44566777777778999888
No 445
>TIGR01409 TAT_signal_seq Tat (twin-arginine translocation) pathway signal sequence. Members with small amino acid side chains at the -1 and -3 positions from the C-terminus of the model should be predicted to be cleaved as are Sec pathway signal sequences. Members are almost exclusively bacterial, although archaeal sequences are also found. A large fraction of the members of this family may have bound redox-active cofactors.
Probab=24.11 E-value=32 Score=21.93 Aligned_cols=11 Identities=18% Similarity=0.410 Sum_probs=8.5
Q ss_pred HhhhhHhhhcc
Q 037063 49 ARHEFKVTTTS 59 (588)
Q Consensus 49 ~~~~~~~~~~~ 59 (588)
+||+|+|..+.
T Consensus 2 sRR~Flk~~~~ 12 (29)
T TIGR01409 2 SRRDFLKGAAA 12 (29)
T ss_pred chhhhHHHHHH
Confidence 68999987653
No 446
>PRK02220 4-oxalocrotonate tautomerase; Provisional
Probab=23.99 E-value=1e+02 Score=22.93 Aligned_cols=30 Identities=3% Similarity=0.110 Sum_probs=23.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCH
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQ 207 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~ 207 (588)
.++.+.+.+.+.+.+|+++++-.|+|+...
T Consensus 18 ~~l~~~it~~l~~~~~~p~~~v~V~i~e~~ 47 (61)
T PRK02220 18 KALVKDVTAAVSKNTGAPAEHIHVIINEMS 47 (61)
T ss_pred HHHHHHHHHHHHHHhCcChhhEEEEEEEeC
Confidence 678888899999999998877666666543
No 447
>PF08057 Ery_res_leader2: Erythromycin resistance leader peptide; InterPro: IPR012559 This family consists of erythromycin resistance gene leader peptides. These leader peptides are involved in the transcriptional attenuation control of the synthesis of the macrolide-lincosamide -streptogramin B resistance protein. It acts as a transcriptional attenuator, in contrast to other inducible erm genes. The mRNA leader sequence can fold in either of two mutually exclusive conformations, one of which is postulated to form in the absence of induction, and to contain two rho factor-independent terminators [].; GO: 0046677 response to antibiotic
Probab=22.89 E-value=34 Score=17.50 Aligned_cols=10 Identities=50% Similarity=0.684 Sum_probs=7.4
Q ss_pred cccccccccc
Q 037063 574 ERWRYMALNQ 583 (588)
Q Consensus 574 ~~~~~~~~~~ 583 (588)
.+.||-.|||
T Consensus 5 mrlrfptlnq 14 (14)
T PF08057_consen 5 MRLRFPTLNQ 14 (14)
T ss_pred eeeeccccCC
Confidence 4677888887
No 448
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=22.86 E-value=4.3e+02 Score=29.00 Aligned_cols=12 Identities=17% Similarity=0.462 Sum_probs=7.3
Q ss_pred hHHHHHHHHHhC
Q 037063 76 LQESFANFTKVF 87 (588)
Q Consensus 76 ~~~~~~~f~~~~ 87 (588)
|-++|++|++.|
T Consensus 259 ~L~afqevi~Dy 270 (556)
T KOG1467|consen 259 MLQAFQEVIKDY 270 (556)
T ss_pred HHHHHHHHHHhc
Confidence 444566677666
No 449
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=22.70 E-value=4.8e+02 Score=22.19 Aligned_cols=32 Identities=16% Similarity=0.230 Sum_probs=19.7
Q ss_pred CcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEE
Q 037063 282 KKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLL 317 (588)
Q Consensus 282 ~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvv 317 (588)
++.-+|+++. +|.-..+-++ +.|+++|+.+++
T Consensus 60 ~~~~~i~iS~----~g~~~~~~~~~~~a~~~g~~iv~ 92 (139)
T cd05013 60 PGDVVIAISF----SGETKETVEAAEIAKERGAKVIA 92 (139)
T ss_pred CCCEEEEEeC----CCCCHHHHHHHHHHHHcCCeEEE
Confidence 4555666654 4554445555 788888877654
No 450
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=21.70 E-value=9e+02 Score=24.98 Aligned_cols=132 Identities=12% Similarity=0.168 Sum_probs=62.8
Q ss_pred hHHHHHHHHHHHHHhCCC--C------CCceEEEe-cC----HHHHHHHHHHhCCCCCCCeE-EEcCC-CchhHHHHHHH
Q 037063 178 SELESKIRKRIMDFMNIS--E------DDYTLVFT-AN----QSSAFKLLAESYPFYSNPRL-LTVYD-HENEAAALMIE 242 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~--~------~e~~vvft-~g----~T~al~lv~~s~~~~~gd~l-l~~~e-~~s~~~~~~~~ 242 (588)
..+.+.+++.+.++++.. + ....+.++ ++ +|.+.+++. .+ -..|.+| +...| +.+..+..+..
T Consensus 86 ~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~vi~lvGpnGsGKTTt~~kLA~-~l-~~~g~~V~Li~~D~~r~~a~eql~~ 163 (318)
T PRK10416 86 EELKELLKEELAEILEPVEKPLNIEEKKPFVILVVGVNGVGKTTTIGKLAH-KY-KAQGKKVLLAAGDTFRAAAIEQLQV 163 (318)
T ss_pred HHHHHHHHHHHHHHhCcCCccccccCCCCeEEEEECCCCCcHHHHHHHHHH-HH-HhcCCeEEEEecCccchhhHHHHHH
Confidence 356677888888887621 0 11233333 22 233444443 34 2345553 34444 33334445556
Q ss_pred HHHhcCCEEEEEeccCCCCc-cCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHH------Hc
Q 037063 243 SSKKRGARVSSAEFAWPNLR-IHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAA------EK 311 (588)
Q Consensus 243 ~a~~~G~~v~~v~~~~~~~~-i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~------~~ 311 (588)
.+++.|+.+...+.. .+.. +-.+.+..... .+..+|++..+-...=...-++++ +.++ ..
T Consensus 164 ~a~~~~i~~~~~~~~-~dpa~~v~~~l~~~~~--------~~~D~ViIDTaGr~~~~~~l~~eL~~~~~v~~~~~~~~p~ 234 (318)
T PRK10416 164 WGERVGVPVIAQKEG-ADPASVAFDAIQAAKA--------RGIDVLIIDTAGRLHNKTNLMEELKKIKRVIKKADPDAPH 234 (318)
T ss_pred HHHHcCceEEEeCCC-CCHHHHHHHHHHHHHh--------CCCCEEEEeCCCCCcCCHHHHHHHHHHHHHHhhhcCCCCc
Confidence 677788776655322 1100 11123333333 567888888653211111112333 3332 24
Q ss_pred CcEEEEeCC
Q 037063 312 GWHVLLDAT 320 (588)
Q Consensus 312 g~~vvvDaa 320 (588)
+.++++|+.
T Consensus 235 ~~~LVl~a~ 243 (318)
T PRK10416 235 EVLLVLDAT 243 (318)
T ss_pred eEEEEEECC
Confidence 577888888
No 451
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=21.59 E-value=4.2e+02 Score=23.57 Aligned_cols=71 Identities=6% Similarity=0.030 Sum_probs=46.5
Q ss_pred HHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcC---cEE
Q 037063 240 MIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKG---WHV 315 (588)
Q Consensus 240 ~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g---~~v 315 (588)
+....+..|.+|..+..+ +.++++.++..+ .+..+|.++... |.....++++ +++++.| +.+
T Consensus 19 v~~~L~~~GfeVidLG~~-----v~~e~~v~aa~~-------~~adiVglS~L~--t~~~~~~~~~~~~l~~~gl~~v~v 84 (128)
T cd02072 19 LDHAFTEAGFNVVNLGVL-----SPQEEFIDAAIE-------TDADAILVSSLY--GHGEIDCKGLREKCDEAGLKDILL 84 (128)
T ss_pred HHHHHHHCCCEEEECCCC-----CCHHHHHHHHHH-------cCCCEEEEeccc--cCCHHHHHHHHHHHHHCCCCCCeE
Confidence 345567889999988775 567777776652 678888887653 3333445666 7777764 466
Q ss_pred EEeCCCcCC
Q 037063 316 LLDATALGS 324 (588)
Q Consensus 316 vvDaa~~~~ 324 (588)
++=++-.+|
T Consensus 85 ivGG~~~i~ 93 (128)
T cd02072 85 YVGGNLVVG 93 (128)
T ss_pred EEECCCCCC
Confidence 666654443
No 452
>PRK10867 signal recognition particle protein; Provisional
Probab=21.32 E-value=8.1e+02 Score=26.66 Aligned_cols=128 Identities=10% Similarity=0.080 Sum_probs=65.8
Q ss_pred hHHHHHHHHHHHHHhCCCC-------C-CceEEEec----C-HHHHHHHHHHhCCCCC-CCe-EEEc-CCCchhHHHHHH
Q 037063 178 SELESKIRKRIMDFMNISE-------D-DYTLVFTA----N-QSSAFKLLAESYPFYS-NPR-LLTV-YDHENEAAALMI 241 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~-------~-e~~vvft~----g-~T~al~lv~~s~~~~~-gd~-ll~~-~e~~s~~~~~~~ 241 (588)
..++.-+++.+.++++-.. . ...|+|+. | +|.+.+++.. + .+. |.+ ++.. ..+-+..+..+.
T Consensus 72 ~~~~~~v~~el~~~l~~~~~~~~~~~~~p~vI~~vG~~GsGKTTtaakLA~~-l-~~~~G~kV~lV~~D~~R~aa~eQL~ 149 (433)
T PRK10867 72 QQVIKIVNDELVEILGGENSELNLAAKPPTVIMMVGLQGAGKTTTAGKLAKY-L-KKKKKKKVLLVAADVYRPAAIEQLK 149 (433)
T ss_pred HHHHHHHHHHHHHHhCCCcceeeecCCCCEEEEEECCCCCcHHHHHHHHHHH-H-HHhcCCcEEEEEccccchHHHHHHH
Confidence 3466677777777776321 1 22344442 1 3556666554 3 233 655 3343 345444555556
Q ss_pred HHHHhcCCEEEEEeccCCCCccCHHHHHH-HHhhhccccCCCcceEEEEeCCCCCCCccC-CH---HHH----HHHHHcC
Q 037063 242 ESSKKRGARVSSAEFAWPNLRIHSGKLMK-KIVGKRKKKKKKKRGLFVFPLQSKVTGARY-SY---MWM----SVAAEKG 312 (588)
Q Consensus 242 ~~a~~~G~~v~~v~~~~~~~~i~~e~l~~-~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~-pl---~~I----~~a~~~g 312 (588)
.+++..|+.+...+.. .++.++.. .+. ........+|++... |... +- +++ +.++...
T Consensus 150 ~~a~~~gv~v~~~~~~-----~dp~~i~~~a~~----~a~~~~~DvVIIDTa----Grl~~d~~lm~eL~~i~~~v~p~e 216 (433)
T PRK10867 150 TLGEQIGVPVFPSGDG-----QDPVDIAKAALE----EAKENGYDVVIVDTA----GRLHIDEELMDELKAIKAAVNPDE 216 (433)
T ss_pred HHHhhcCCeEEecCCC-----CCHHHHHHHHHH----HHHhcCCCEEEEeCC----CCcccCHHHHHHHHHHHHhhCCCe
Confidence 6788888876654321 24555543 332 111245678888754 3221 21 222 2233457
Q ss_pred cEEEEeCC
Q 037063 313 WHVLLDAT 320 (588)
Q Consensus 313 ~~vvvDaa 320 (588)
+++++|+.
T Consensus 217 vllVlda~ 224 (433)
T PRK10867 217 ILLVVDAM 224 (433)
T ss_pred EEEEEecc
Confidence 89999975
No 453
>PRK10014 DNA-binding transcriptional repressor MalI; Provisional
Probab=20.99 E-value=8.8e+02 Score=24.56 Aligned_cols=75 Identities=16% Similarity=0.019 Sum_probs=38.4
Q ss_pred CCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHHH
Q 037063 231 DHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAAE 310 (588)
Q Consensus 231 e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~ 310 (588)
++.......+.+.++..|..+...... .+..-..+.++.++. .+...|++..... .....++.+++
T Consensus 77 ~~~~~i~~gi~~~a~~~g~~~~~~~~~-~~~~~~~~~~~~l~~--------~~vdgiIi~~~~~-----~~~~~~~~l~~ 142 (342)
T PRK10014 77 PFYAELTAGLTEALEAQGRMVFLLQGG-KDGEQLAQRFSTLLN--------QGVDGVVIAGAAG-----SSDDLREMAEE 142 (342)
T ss_pred chHHHHHHHHHHHHHHcCCEEEEEeCC-CCHHHHHHHHHHHHh--------CCCCEEEEeCCCC-----CcHHHHHHHhh
Confidence 455556666778888899888766543 111111122333333 3444444432211 12234577788
Q ss_pred cCcEEE-EeC
Q 037063 311 KGWHVL-LDA 319 (588)
Q Consensus 311 ~g~~vv-vDa 319 (588)
.|+++| +|.
T Consensus 143 ~~iPvV~~~~ 152 (342)
T PRK10014 143 KGIPVVFASR 152 (342)
T ss_pred cCCCEEEEec
Confidence 888665 443
No 454
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=20.99 E-value=9.4e+02 Score=25.75 Aligned_cols=14 Identities=14% Similarity=0.074 Sum_probs=7.2
Q ss_pred cceEEEEeCCCCCC
Q 037063 283 KRGLFVFPLQSKVT 296 (588)
Q Consensus 283 ~t~Lv~~~~~sn~t 296 (588)
+.++|++.+.+...
T Consensus 305 ~~~lvvIDyLql~~ 318 (421)
T TIGR03600 305 GLDLIVVDYIQLMA 318 (421)
T ss_pred CCCEEEEecccccC
Confidence 35556665554443
No 455
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=20.97 E-value=4e+02 Score=29.00 Aligned_cols=128 Identities=13% Similarity=0.129 Sum_probs=64.6
Q ss_pred hHHHHHHHHHHHHHhCCC-----CC---CceEEEec----C-HHHHHHHHHHhCCCCCCCe-E-EEcCCCchhHHHHHHH
Q 037063 178 SELESKIRKRIMDFMNIS-----ED---DYTLVFTA----N-QSSAFKLLAESYPFYSNPR-L-LTVYDHENEAAALMIE 242 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~-----~~---e~~vvft~----g-~T~al~lv~~s~~~~~gd~-l-l~~~e~~s~~~~~~~~ 242 (588)
..+..-+.+.+.++++-. +. ...|.|+. | +|.+.+++.. + -+.|.+ + +....|-+.++.|++.
T Consensus 72 ~~v~~~v~~~L~~~l~~~~~~~~~~~~~~~vi~lvG~~GvGKTTtaaKLA~~-l-~~~G~kV~lV~~D~~R~aA~eQLk~ 149 (429)
T TIGR01425 72 KMIQHAVFKELCNLVDPGVEAFTPKKGKQNVIMFVGLQGSGKTTTCTKLAYY-Y-QRKGFKPCLVCADTFRAGAFDQLKQ 149 (429)
T ss_pred HHHHHHHHHHHHHHhCCCCccccccCCCCeEEEEECCCCCCHHHHHHHHHHH-H-HHCCCCEEEEcCcccchhHHHHHHH
Confidence 356667777777777621 11 12344442 2 3555565543 4 345656 3 3444455557777777
Q ss_pred HHHhcCCEEEEEeccCCCCccCHHHH-HHHHhhhccccCCCcceEEEEeCCCCCCCccCCHH----HH-HHHH---HcCc
Q 037063 243 SSKKRGARVSSAEFAWPNLRIHSGKL-MKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYM----WM-SVAA---EKGW 313 (588)
Q Consensus 243 ~a~~~G~~v~~v~~~~~~~~i~~e~l-~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~----~I-~~a~---~~g~ 313 (588)
+++..|+.+..+... -++.++ .+.+. +.+.....+|++... |....-+ ++ ++.+ ...+
T Consensus 150 ~a~~~~vp~~~~~~~-----~dp~~i~~~~l~----~~~~~~~DvViIDTa----Gr~~~d~~lm~El~~i~~~~~p~e~ 216 (429)
T TIGR01425 150 NATKARIPFYGSYTE-----SDPVKIASEGVE----KFKKENFDIIIVDTS----GRHKQEDSLFEEMLQVAEAIQPDNI 216 (429)
T ss_pred HhhccCCeEEeecCC-----CCHHHHHHHHHH----HHHhCCCCEEEEECC----CCCcchHHHHHHHHHHhhhcCCcEE
Confidence 788777766543321 122222 12222 111145678888764 4333322 22 2222 2357
Q ss_pred EEEEeCC
Q 037063 314 HVLLDAT 320 (588)
Q Consensus 314 ~vvvDaa 320 (588)
++++|+.
T Consensus 217 lLVlda~ 223 (429)
T TIGR01425 217 IFVMDGS 223 (429)
T ss_pred EEEeccc
Confidence 8999975
No 456
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=20.93 E-value=4.4e+02 Score=27.79 Aligned_cols=121 Identities=6% Similarity=0.019 Sum_probs=66.3
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeE-EEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCC
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRL-LTVYDHENEAAALMIESSKKRGARVSSAEFAWPNL 261 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~l-l~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~ 261 (588)
+.-+++++-+|.+ ++-+.-....+.++.+-. |-+ +-..+.. ..+.+. .+.+.|..| .+ ..|
T Consensus 155 ~~L~~~~~e~Gl~-----~~tev~d~~~v~~~~~~~-----d~lqIga~~~~--n~~LL~-~va~t~kPV-ll----k~G 216 (352)
T PRK13396 155 ELLAAAREATGLG-----IITEVMDAADLEKIAEVA-----DVIQVGARNMQ--NFSLLK-KVGAQDKPV-LL----KRG 216 (352)
T ss_pred HHHHHHHHHcCCc-----EEEeeCCHHHHHHHHhhC-----CeEEECccccc--CHHHHH-HHHccCCeE-EE----eCC
Confidence 3444566667774 666666677778776632 332 2112211 122333 334455433 33 334
Q ss_pred c-cCHHHHHHHHhhhccccCCCcceEEEEeC-----CCCCCCccCCHHHHHHHHH-cCcEEEEeCCCcCC
Q 037063 262 R-IHSGKLMKKIVGKRKKKKKKKRGLFVFPL-----QSKVTGARYSYMWMSVAAE-KGWHVLLDATALGS 324 (588)
Q Consensus 262 ~-i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~-----~sn~tG~~~pl~~I~~a~~-~g~~vvvDaa~~~~ 324 (588)
. .+++++..+++. -....+..++.+.- .+..+=...++..|...++ .+.+|++|.+|+.+
T Consensus 217 ~~~t~ee~~~A~e~---i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G 283 (352)
T PRK13396 217 MAATIDEWLMAAEY---ILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTG 283 (352)
T ss_pred CCCCHHHHHHHHHH---HHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCC
Confidence 4 388888877762 01113345554433 2222345677888844455 49999999999997
No 457
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=20.92 E-value=4.7e+02 Score=26.21 Aligned_cols=116 Identities=10% Similarity=0.041 Sum_probs=63.0
Q ss_pred HHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeE-EEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCcc-CH
Q 037063 188 IMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRL-LTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRI-HS 265 (588)
Q Consensus 188 ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~l-l~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i-~~ 265 (588)
+++-+|.+ ++-+.--...+..+.+.. |-+ +...+.. ..+. .+.+.+.|..|.. .+|.. ++
T Consensus 84 ~~~~~Gl~-----~~t~~~d~~~~~~l~~~~-----d~lkI~s~~~~--n~~L-L~~~a~~gkPVil-----k~G~~~t~ 145 (260)
T TIGR01361 84 AADEHGLP-----VVTEVMDPRDVEIVAEYA-----DILQIGARNMQ--NFEL-LKEVGKQGKPVLL-----KRGMGNTI 145 (260)
T ss_pred HHHHhCCC-----EEEeeCChhhHHHHHhhC-----CEEEECccccc--CHHH-HHHHhcCCCcEEE-----eCCCCCCH
Confidence 46666774 555555566667776532 322 1122221 1222 3444556654433 34444 78
Q ss_pred HHHHHHHhhhccccCCCcceEEEEeC-CCCCCCc---cCCHHHH-HHHHHcCcEEEEeCCCcCC
Q 037063 266 GKLMKKIVGKRKKKKKKKRGLFVFPL-QSKVTGA---RYSYMWM-SVAAEKGWHVLLDATALGS 324 (588)
Q Consensus 266 e~l~~~i~~~~~~~~~~~t~Lv~~~~-~sn~tG~---~~pl~~I-~~a~~~g~~vvvDaa~~~~ 324 (588)
++++.++..- + ...+..++.+.. .++..+. ..++..| .+.+..+++|++|..|..+
T Consensus 146 ~e~~~Ave~i--~-~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 146 EEWLYAAEYI--L-SSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred HHHHHHHHHH--H-HcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 8888887621 1 112344555442 4333232 4677778 4444469999999999877
No 458
>PRK00745 4-oxalocrotonate tautomerase; Provisional
Probab=20.89 E-value=1.2e+02 Score=22.53 Aligned_cols=33 Identities=9% Similarity=0.231 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHH
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSA 210 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~a 210 (588)
.++.+.+-+.+.+.+|+++++..|+|+....+.
T Consensus 18 ~~l~~~it~~l~~~~~~p~~~v~V~i~e~~~~~ 50 (62)
T PRK00745 18 RKLVEEITRVTVETLGCPPESVDIIITDVKREN 50 (62)
T ss_pred HHHHHHHHHHHHHHcCCChhHEEEEEEEcChHH
Confidence 677888888889999998887777777655443
No 459
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=20.83 E-value=9.8e+02 Score=26.84 Aligned_cols=120 Identities=13% Similarity=0.121 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCH--HHHHHHHHHhCCCCCCCe--EEEcCCCch-hHHHHHHHHHHhcCCEEEE
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQ--SSAFKLLAESYPFYSNPR--LLTVYDHEN-EAAALMIESSKKRGARVSS 253 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~--T~al~lv~~s~~~~~gd~--ll~~~e~~s-~~~~~~~~~a~~~G~~v~~ 253 (588)
.+.+.+++.+.+-+-++. . ..+|-+|+ ++.+..++.-. ...... ..+..+... .=..+....|+..|...+.
T Consensus 214 ~l~~~l~~sV~~r~~adv-p-vg~~lSGGlDSS~Iaa~a~~~-~~~~~~~~fsvg~~~~~~~D~~~a~~~A~~lg~~h~~ 290 (542)
T COG0367 214 HLRSLLEDAVKRRLVADV-P-VGVFLSGGLDSSLIAAIAAEE-LGKEGKTTFTVGFEDSDSPDAKYARAVAKFLGTPHHE 290 (542)
T ss_pred HHHHHHHHHHHHHhccCC-c-EEEEeCCCccHHHHHHHHHHh-ccccceeeeEeecCCCCCchHHHHHHHHHHhCCCcEE
Confidence 344444455555554432 2 35666664 34444444433 222222 233333321 1345667888999987777
Q ss_pred EeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeC
Q 037063 254 AEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDA 319 (588)
Q Consensus 254 v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDa 319 (588)
+.+. .+++.+.+.+ -+..+..+.. .+...|+--+ +.+++.|..|++.+
T Consensus 291 ~~~~-------~~e~~~~~~~----------vv~~~~~p~~-~~~~~ply~~~~~a~~~g~kVvLSG 339 (542)
T COG0367 291 IILT-------NEELLNALPE----------VVKALDTPGG-MAASIPLYLLSRKARAEGEKVVLSG 339 (542)
T ss_pred Eeec-------HHHHHHHHHH----------HHhhcCCCCc-ccchhHHHHHHHhhhhcCcEEeecC
Confidence 6653 4666666651 1112222222 5566677777 88999998888865
No 460
>cd07492 Peptidases_S8_8 Peptidase S8 family domain, uncharacterized subfamily 8. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=20.38 E-value=4.9e+02 Score=24.86 Aligned_cols=84 Identities=15% Similarity=0.007 Sum_probs=44.4
Q ss_pred CchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH
Q 037063 232 HENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE 310 (588)
Q Consensus 232 ~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~ 310 (588)
.|.+.+..+. .+...++++..+++....+....+.+.+.|+ .....+.+++.++...........++++ +.+.+
T Consensus 45 gHGT~vAgii-a~~~p~~~i~~~~v~~~~~~~~~~~~~~ai~----~a~~~~v~Vin~S~G~~~~~~~~~~~~~~~~a~~ 119 (222)
T cd07492 45 GHGTACAGII-KKYAPEAEIGSIKILGEDGRCNSFVLEKALR----ACVENDIRIVNLSLGGPGDRDFPLLKELLEYAYK 119 (222)
T ss_pred CcHHHHHHHH-HccCCCCeEEEEEEeCCCCCcCHHHHHHHHH----HHHHCCCCEEEeCCCCCCCCcCHHHHHHHHHHHH
Confidence 3444554432 2223467777776643344455666666665 2222567777777654433322234444 66666
Q ss_pred cCcEEEEeCC
Q 037063 311 KGWHVLLDAT 320 (588)
Q Consensus 311 ~g~~vvvDaa 320 (588)
.|..+++=+.
T Consensus 120 ~g~l~V~aag 129 (222)
T cd07492 120 AGGIIVAAAP 129 (222)
T ss_pred CCCEEEEECC
Confidence 6777777544
No 461
>cd00338 Ser_Recombinase Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain. These enzymes perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase. Serine recombinases demonstrate functional versatility and include resolvases, invertases, integrases, and transposases. Resolvases and invertases (i.e. Tn3, gamma-delta, Tn5044 resolvases, Gin and Hin invertases) in this family contain a C-terminal DNA binding domain and comprise a major phylogenic group. Also included are phage- and bacterial-encoded recombinases such as phiC31 integrase, SpoIVCA excisionase, and Tn4451 TnpX transposase. These integrases and transposases have larger C-terminal domains compared to resolvases/invertases and are referred to as large serine recombinases. Also belonging to this family are protei
Probab=20.16 E-value=4.6e+02 Score=22.59 Aligned_cols=77 Identities=10% Similarity=0.086 Sum_probs=44.6
Q ss_pred HHHHHHHhcCCEEEEEeccCC-CC--ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcE
Q 037063 239 LMIESSKKRGARVSSAEFAWP-NL--RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWH 314 (588)
Q Consensus 239 ~~~~~a~~~G~~v~~v~~~~~-~~--~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~ 314 (588)
.+..+|...|..+..+=.+.. .+ ..+-..+.++|.. ........|++...+...=....+..+ +.++++|+.
T Consensus 22 ~~~~~a~~~g~~i~~~~~d~~~s~~~~~~R~~~~~ll~~----~~~~~~d~ivv~~~~Rl~R~~~~~~~~~~~l~~~gi~ 97 (137)
T cd00338 22 ALREYAARNGLEVVGEYEDAGSSATSLVDRPGLQRLLAD----VKAGKIDVVLVEKLDRLSRNLVDLLELLELLEAHGVR 97 (137)
T ss_pred HHHHHHHHCCCEEEEEEEeCCCCcccccCCHHHHHHHHH----HHcCCCCEEEEEecchhhCCHHHHHHHHHHHHHCCCE
Confidence 446677777887655433321 11 2334456666652 112456677777777654444344455 788888988
Q ss_pred EEEeC
Q 037063 315 VLLDA 319 (588)
Q Consensus 315 vvvDa 319 (588)
|++-.
T Consensus 98 l~~~~ 102 (137)
T cd00338 98 VVTAD 102 (137)
T ss_pred EEEec
Confidence 87755
Done!