Query 037063
Match_columns 588
No_of_seqs 327 out of 2696
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 13:46:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037063.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037063hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qm2_A Phosphoserine aminotran 100.0 2.1E-40 7E-45 350.8 21.0 352 111-568 26-384 (386)
2 3e77_A Phosphoserine aminotran 100.0 3.3E-39 1.1E-43 339.9 22.7 354 113-568 14-374 (377)
3 1kmj_A Selenocysteine lyase; p 100.0 2.4E-36 8.1E-41 320.6 39.0 390 95-568 4-404 (406)
4 3cai_A Possible aminotransfera 100.0 4.1E-36 1.4E-40 319.7 33.1 375 95-565 12-405 (406)
5 3m5u_A Phosphoserine aminotran 100.0 4.8E-37 1.6E-41 322.2 25.4 351 110-568 3-359 (361)
6 1t3i_A Probable cysteine desul 100.0 5.3E-35 1.8E-39 311.8 40.0 391 94-568 8-412 (420)
7 4hvk_A Probable cysteine desul 100.0 9.8E-36 3.4E-40 312.6 32.7 362 112-569 1-373 (382)
8 3e9k_A Kynureninase; kynurenin 100.0 7.3E-36 2.5E-40 324.5 28.7 382 110-568 66-460 (465)
9 1elu_A L-cysteine/L-cystine C- 100.0 3E-34 1E-38 302.9 38.4 377 95-565 3-388 (390)
10 4eb5_A Probable cysteine desul 100.0 1.2E-34 4.1E-39 305.1 32.8 366 112-568 1-372 (382)
11 3lvm_A Cysteine desulfurase; s 100.0 1.2E-33 4E-38 302.4 35.9 374 110-570 21-400 (423)
12 3a9z_A Selenocysteine lyase; P 100.0 1.2E-33 4.1E-38 303.5 33.5 384 99-568 8-427 (432)
13 2z9v_A Aspartate aminotransfer 100.0 1.1E-33 3.9E-38 299.2 32.4 364 103-569 2-371 (392)
14 1qz9_A Kynureninase; kynurenin 100.0 2.3E-33 8E-38 299.4 33.6 396 79-586 5-414 (416)
15 2dr1_A PH1308 protein, 386AA l 100.0 1.2E-32 4.2E-37 290.2 35.3 368 98-569 9-379 (386)
16 1eg5_A Aminotransferase; PLP-d 100.0 2.6E-32 8.8E-37 287.3 37.4 367 113-569 3-376 (384)
17 3vax_A Putative uncharacterize 100.0 3.9E-34 1.3E-38 303.6 23.1 368 110-568 19-399 (400)
18 2huf_A Alanine glyoxylate amin 100.0 5.9E-32 2E-36 286.1 32.8 370 98-569 7-383 (393)
19 3zrp_A Serine-pyruvate aminotr 100.0 1.6E-31 5.4E-36 281.3 34.8 353 114-570 4-364 (384)
20 3ffr_A Phosphoserine aminotran 100.0 3.8E-32 1.3E-36 283.6 29.3 356 112-566 4-361 (362)
21 1vjo_A Alanine--glyoxylate ami 100.0 6.8E-32 2.3E-36 285.8 30.5 367 94-567 18-393 (393)
22 2ch1_A 3-hydroxykynurenine tra 100.0 4E-31 1.4E-35 280.0 31.5 366 103-568 10-382 (396)
23 2yrr_A Aminotransferase, class 100.0 6.6E-31 2.3E-35 273.0 31.2 345 114-568 2-352 (353)
24 1iug_A Putative aspartate amin 100.0 6.6E-31 2.3E-35 273.4 30.7 340 114-568 3-347 (352)
25 2c0r_A PSAT, phosphoserine ami 100.0 3.5E-31 1.2E-35 277.5 28.0 352 110-568 2-360 (362)
26 3nnk_A Ureidoglycine-glyoxylat 100.0 2.1E-30 7.1E-35 275.7 32.5 365 104-569 6-390 (411)
27 3f0h_A Aminotransferase; RER07 100.0 6.2E-30 2.1E-34 268.9 32.9 352 112-569 19-374 (376)
28 3kgw_A Alanine-glyoxylate amin 100.0 3.1E-30 1.1E-34 272.2 29.8 361 111-568 22-387 (393)
29 2z67_A O-phosphoseryl-tRNA(SEC 100.0 8.4E-32 2.9E-36 292.1 17.7 385 76-566 45-455 (456)
30 3isl_A Purine catabolism prote 100.0 8.4E-30 2.9E-34 271.4 32.8 329 178-569 43-390 (416)
31 2bkw_A Alanine-glyoxylate amin 100.0 3.2E-29 1.1E-33 263.9 33.1 353 111-568 4-383 (385)
32 1m32_A 2-aminoethylphosphonate 100.0 5.3E-29 1.8E-33 260.0 34.3 323 179-568 37-364 (366)
33 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 8E-29 2.7E-33 259.8 24.1 351 110-568 7-369 (371)
34 3ke3_A Putative serine-pyruvat 100.0 1E-28 3.5E-33 261.2 25.1 320 178-568 34-375 (379)
35 1w23_A Phosphoserine aminotran 100.0 1.8E-28 6.1E-33 256.2 26.5 349 112-568 3-359 (360)
36 3f9t_A TDC, L-tyrosine decarbo 100.0 3.8E-27 1.3E-31 248.4 35.3 333 112-567 32-396 (397)
37 2dgk_A GAD-beta, GADB, glutama 100.0 3.2E-26 1.1E-30 247.7 36.0 330 178-576 80-441 (452)
38 2fyf_A PSAT, phosphoserine ami 100.0 1.4E-26 4.9E-31 246.0 29.8 344 111-568 39-397 (398)
39 3ffh_A Histidinol-phosphate am 100.0 9.4E-26 3.2E-30 236.2 35.0 342 87-566 13-363 (363)
40 1wyu_A Glycine dehydrogenase ( 100.0 5.3E-27 1.8E-31 252.9 25.6 316 178-566 107-437 (438)
41 2qma_A Diaminobutyrate-pyruvat 100.0 7.6E-26 2.6E-30 247.9 34.6 386 88-568 74-495 (497)
42 2jis_A Cysteine sulfinic acid 100.0 8.9E-26 3E-30 248.4 34.5 363 111-568 108-514 (515)
43 3hbx_A GAD 1, glutamate decarb 100.0 2.9E-25 9.9E-30 243.5 38.3 317 178-568 94-443 (502)
44 3ly1_A Putative histidinol-pho 99.9 1.6E-25 5.4E-30 233.4 32.5 327 110-570 16-353 (354)
45 3get_A Histidinol-phosphate am 99.9 7.2E-26 2.4E-30 237.2 29.9 343 86-566 10-364 (365)
46 2fnu_A Aminotransferase; prote 99.9 7E-25 2.4E-29 230.0 34.8 322 179-569 32-372 (375)
47 1rv3_A Serine hydroxymethyltra 99.9 3.2E-27 1.1E-31 257.9 17.3 361 112-568 46-430 (483)
48 2okj_A Glutamate decarboxylase 99.9 6.6E-25 2.3E-29 240.8 35.5 368 111-568 92-501 (504)
49 3p1t_A Putative histidinol-pho 99.9 3.2E-25 1.1E-29 229.3 30.5 315 110-567 16-335 (337)
50 3euc_A Histidinol-phosphate am 99.9 2.3E-25 7.8E-30 233.6 29.1 288 181-567 69-366 (367)
51 3dzz_A Putative pyridoxal 5'-p 99.9 4.6E-25 1.6E-29 232.7 31.1 309 178-568 65-388 (391)
52 2w8t_A SPT, serine palmitoyltr 99.9 2.3E-24 7.7E-29 231.4 35.9 301 178-570 108-416 (427)
53 3mc6_A Sphingosine-1-phosphate 99.9 2.7E-25 9.2E-30 243.3 28.2 311 178-569 106-437 (497)
54 1svv_A Threonine aldolase; str 99.9 1.8E-25 6.1E-30 232.7 25.4 332 110-568 13-357 (359)
55 1v2d_A Glutamine aminotransfer 99.9 2.5E-25 8.6E-30 234.6 26.3 294 182-568 64-370 (381)
56 1qgn_A Protein (cystathionine 99.9 3.1E-25 1.1E-29 239.0 26.5 306 178-568 113-444 (445)
57 2cb1_A O-acetyl homoserine sul 99.9 1.4E-24 4.7E-29 232.1 31.1 322 178-564 55-411 (412)
58 1fc4_A 2-amino-3-ketobutyrate 99.9 1.1E-24 3.6E-29 231.3 29.7 342 110-568 43-396 (401)
59 3tqx_A 2-amino-3-ketobutyrate 99.9 7.7E-25 2.6E-29 231.7 28.4 342 111-568 42-395 (399)
60 4dq6_A Putative pyridoxal phos 99.9 1.2E-24 4.1E-29 229.6 29.5 353 95-567 21-391 (391)
61 3a2b_A Serine palmitoyltransfe 99.9 1.4E-24 4.7E-29 230.3 30.0 298 178-568 87-391 (398)
62 3mad_A Sphingosine-1-phosphate 99.9 9E-25 3.1E-29 240.3 29.3 305 178-568 138-468 (514)
63 3g0t_A Putative aminotransfera 99.9 7.8E-25 2.7E-29 235.0 27.6 316 183-568 86-436 (437)
64 3kax_A Aminotransferase, class 99.9 1.5E-24 5.1E-29 228.2 29.0 305 178-566 62-382 (383)
65 2bwn_A 5-aminolevulinate synth 99.9 3.3E-25 1.1E-29 235.4 23.8 299 178-568 90-399 (401)
66 1pff_A Methionine gamma-lyase; 99.9 1.4E-25 4.9E-30 231.9 20.2 309 183-565 2-330 (331)
67 3frk_A QDTB; aminotransferase, 99.9 1.5E-24 5.2E-29 228.1 27.1 316 178-568 35-367 (373)
68 1gd9_A Aspartate aminotransfer 99.9 2.1E-24 7E-29 228.1 28.0 298 183-568 67-385 (389)
69 3hdo_A Histidinol-phosphate am 99.9 1.3E-24 4.3E-29 227.6 25.6 284 182-568 68-354 (360)
70 1j32_A Aspartate aminotransfer 99.9 2.1E-24 7.1E-29 228.0 26.3 300 178-568 70-386 (388)
71 1bs0_A Protein (8-amino-7-oxon 99.9 5.9E-24 2E-28 224.2 29.8 335 110-565 37-383 (384)
72 2fq6_A Cystathionine beta-lyas 99.9 6.1E-24 2.1E-28 227.3 29.8 306 178-565 81-414 (415)
73 3dr4_A Putative perosamine syn 99.9 9.3E-24 3.2E-28 223.5 30.8 321 179-566 56-390 (391)
74 1js3_A DDC;, DOPA decarboxylas 99.9 9.2E-24 3.1E-28 230.6 31.6 325 178-568 112-473 (486)
75 3k40_A Aromatic-L-amino-acid d 99.9 5.8E-24 2E-28 231.5 29.8 321 178-569 112-471 (475)
76 3nra_A Aspartate aminotransfer 99.9 1.5E-24 5E-29 230.3 23.9 305 178-568 81-404 (407)
77 1gc0_A Methionine gamma-lyase; 99.9 3.8E-24 1.3E-28 227.6 27.0 348 111-565 27-397 (398)
78 2vi8_A Serine hydroxymethyltra 99.9 8.2E-25 2.8E-29 232.1 21.8 351 112-568 24-386 (405)
79 2z61_A Probable aspartate amin 99.9 6.1E-24 2.1E-28 223.1 27.9 326 110-567 29-369 (370)
80 3fdb_A Beta C-S lyase, putativ 99.9 3.5E-24 1.2E-28 225.0 25.7 296 183-568 62-375 (377)
81 1u08_A Hypothetical aminotrans 99.9 7.1E-24 2.4E-28 223.9 28.0 300 179-564 71-385 (386)
82 3ftb_A Histidinol-phosphate am 99.9 2.3E-23 7.9E-28 217.4 31.3 285 182-567 64-359 (361)
83 3vp6_A Glutamate decarboxylase 99.9 4.6E-23 1.6E-27 226.5 35.0 331 178-567 134-503 (511)
84 3dyd_A Tyrosine aminotransfera 99.9 5.3E-24 1.8E-28 228.6 26.6 298 182-568 99-423 (427)
85 2o0r_A RV0858C (N-succinyldiam 99.9 1.6E-23 5.6E-28 223.2 30.1 321 179-577 66-403 (411)
86 3cq5_A Histidinol-phosphate am 99.9 3.7E-23 1.3E-27 217.3 32.1 283 183-568 73-367 (369)
87 1v72_A Aldolase; PLP-dependent 99.9 1.1E-23 3.7E-28 219.1 27.6 333 110-568 7-352 (356)
88 1xi9_A Putative transaminase; 99.9 9.3E-24 3.2E-28 224.8 27.6 294 183-568 82-402 (406)
89 1o4s_A Aspartate aminotransfer 99.9 5.3E-24 1.8E-28 225.5 25.6 289 183-568 82-388 (389)
90 1cs1_A CGS, protein (cystathio 99.9 2.8E-23 9.6E-28 219.8 30.5 306 178-566 51-384 (386)
91 2rfv_A Methionine gamma-lyase; 99.9 3.4E-24 1.2E-28 227.8 22.9 350 110-565 25-396 (398)
92 1mdo_A ARNB aminotransferase; 99.9 9.2E-23 3.1E-27 215.6 33.7 327 179-568 39-385 (393)
93 2zyj_A Alpha-aminodipate amino 99.9 1.5E-24 5.1E-29 230.1 20.0 301 182-568 77-392 (397)
94 1b5p_A Protein (aspartate amin 99.9 3.4E-23 1.2E-27 218.9 30.2 292 183-567 72-383 (385)
95 1bw0_A TAT, protein (tyrosine 99.9 1.4E-23 4.8E-28 223.9 27.2 304 182-568 78-412 (416)
96 1fg7_A Histidinol phosphate am 99.9 2E-23 7E-28 218.5 27.5 286 182-565 61-354 (356)
97 1n8p_A Cystathionine gamma-lya 99.9 4.9E-24 1.7E-28 226.6 23.0 308 177-566 53-392 (393)
98 3uwc_A Nucleotide-sugar aminot 99.9 2.9E-23 1E-27 217.9 28.7 314 179-568 38-370 (374)
99 2dou_A Probable N-succinyldiam 99.9 2.9E-23 1E-27 218.4 28.6 298 180-567 64-376 (376)
100 1yiz_A Kynurenine aminotransfe 99.9 3.6E-23 1.2E-27 221.7 29.5 309 179-568 81-428 (429)
101 1d2f_A MALY protein; aminotran 99.9 5.5E-23 1.9E-27 217.3 30.6 301 184-568 69-388 (390)
102 3kki_A CAI-1 autoinducer synth 99.9 4.2E-23 1.4E-27 219.9 29.8 292 179-568 104-403 (409)
103 4e1o_A HDC, histidine decarbox 99.9 5.4E-23 1.9E-27 224.3 31.3 321 178-568 117-477 (481)
104 1c7n_A Cystalysin; transferase 99.9 3.7E-23 1.3E-27 219.2 28.8 305 179-568 70-392 (399)
105 1lc5_A COBD, L-threonine-O-3-p 99.9 2.3E-23 7.7E-28 218.4 26.9 288 182-568 62-359 (364)
106 1b9h_A AHBA synthase, protein 99.9 9.8E-23 3.4E-27 215.3 30.7 324 179-568 38-387 (388)
107 2x5d_A Probable aminotransfera 99.9 2.6E-23 8.7E-28 221.8 26.0 300 182-569 78-398 (412)
108 3cog_A Cystathionine gamma-lya 99.9 1.1E-23 3.8E-28 224.6 23.0 314 179-567 67-400 (403)
109 3l8a_A METC, putative aminotra 99.9 2.8E-23 9.5E-28 222.3 26.0 305 178-567 99-420 (421)
110 3h14_A Aminotransferase, class 99.9 1.1E-22 3.9E-27 215.0 30.0 297 183-568 72-381 (391)
111 3ele_A Amino transferase; RER0 99.9 1E-22 3.6E-27 215.7 29.4 299 178-568 79-395 (398)
112 3op7_A Aminotransferase class 99.9 5.5E-23 1.9E-27 216.0 26.8 295 182-568 66-370 (375)
113 2x3l_A ORN/Lys/Arg decarboxyla 99.9 5.2E-24 1.8E-28 230.1 19.3 285 179-568 57-352 (446)
114 3acz_A Methionine gamma-lyase; 99.9 1.8E-22 6.3E-27 214.0 30.7 308 178-563 58-387 (389)
115 2gb3_A Aspartate aminotransfer 99.9 8.9E-23 3E-27 217.5 28.1 296 183-568 83-401 (409)
116 2c81_A Glutamine-2-deoxy-scyll 99.9 2.4E-22 8E-27 214.8 31.4 336 178-568 41-413 (418)
117 1wyu_B Glycine dehydrogenase s 99.9 1.1E-22 3.7E-27 221.5 29.1 315 178-568 106-440 (474)
118 1jg8_A L-ALLO-threonine aldola 99.9 2.8E-23 9.6E-28 215.8 23.3 331 111-568 4-345 (347)
119 3b8x_A WBDK, pyridoxamine 5-ph 99.9 3E-22 1E-26 212.0 31.3 321 179-562 34-389 (390)
120 2zc0_A Alanine glyoxylate tran 99.9 6.9E-23 2.4E-27 217.7 25.5 309 182-569 78-404 (407)
121 1o69_A Aminotransferase; struc 99.9 1.7E-22 5.8E-27 214.4 28.0 327 179-569 32-387 (394)
122 3jtx_A Aminotransferase; NP_28 99.9 4.6E-22 1.6E-26 210.4 31.1 303 178-566 69-395 (396)
123 1vef_A Acetylornithine/acetyl- 99.9 9.4E-23 3.2E-27 215.9 25.4 324 110-567 43-395 (395)
124 3nyt_A Aminotransferase WBPE; 99.9 6.2E-23 2.1E-27 215.5 23.6 311 179-565 35-360 (367)
125 2dkj_A Serine hydroxymethyltra 99.9 2.6E-23 8.9E-28 220.7 20.7 345 117-568 29-387 (407)
126 1vp4_A Aminotransferase, putat 99.9 3.5E-23 1.2E-27 221.8 21.7 314 182-570 88-419 (425)
127 3qhx_A Cystathionine gamma-syn 99.9 1E-22 3.6E-27 216.2 24.8 311 173-562 60-391 (392)
128 2o1b_A Aminotransferase, class 99.9 8.3E-23 2.8E-27 217.5 23.8 298 182-568 88-402 (404)
129 1e5e_A MGL, methionine gamma-l 99.9 1E-21 3.4E-26 209.5 31.7 311 178-568 61-394 (404)
130 3aow_A Putative uncharacterize 99.9 5.2E-22 1.8E-26 214.6 29.3 307 182-569 121-445 (448)
131 2oga_A Transaminase; PLP-depen 99.9 4E-22 1.4E-26 211.8 27.1 315 179-568 63-395 (399)
132 2r2n_A Kynurenine/alpha-aminoa 99.9 2.1E-21 7.3E-26 208.0 32.9 315 178-569 81-424 (425)
133 3fvs_A Kynurenine--oxoglutarat 99.9 2.7E-22 9.3E-27 214.2 25.7 311 179-568 71-421 (422)
134 2eh6_A Acoat, acetylornithine 99.9 3.1E-22 1.1E-26 210.2 25.6 320 110-566 26-375 (375)
135 3fkd_A L-threonine-O-3-phospha 99.9 5.7E-22 2E-26 206.4 27.2 286 182-572 53-345 (350)
136 2ctz_A O-acetyl-L-homoserine s 99.9 2.6E-21 9E-26 207.3 32.8 326 178-566 57-420 (421)
137 1uu1_A Histidinol-phosphate am 99.9 1.6E-22 5.5E-27 209.5 22.6 310 110-565 19-334 (335)
138 2a7v_A Serine hydroxymethyltra 99.9 6.3E-22 2.2E-26 215.2 27.9 359 118-568 61-440 (490)
139 3ezs_A Aminotransferase ASPB; 99.9 9.4E-22 3.2E-26 206.6 28.1 294 179-568 63-374 (376)
140 3ruy_A Ornithine aminotransfer 99.9 7.6E-22 2.6E-26 208.7 27.6 324 110-567 34-392 (392)
141 3if2_A Aminotransferase; YP_26 99.9 1.7E-22 5.8E-27 217.4 22.9 316 182-570 86-441 (444)
142 3e2y_A Kynurenine-oxoglutarate 99.9 4.3E-22 1.5E-26 211.6 25.4 343 110-565 23-409 (410)
143 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 4.3E-21 1.5E-25 206.5 33.2 336 179-569 62-436 (437)
144 1ibj_A CBL, cystathionine beta 99.9 1.4E-22 4.9E-27 219.7 20.2 314 178-568 132-461 (464)
145 3n0l_A Serine hydroxymethyltra 99.9 8.8E-22 3E-26 209.6 25.6 309 178-568 70-388 (417)
146 1c4k_A Protein (ornithine deca 99.9 5.3E-22 1.8E-26 225.0 24.7 322 179-568 173-565 (730)
147 1iay_A ACC synthase 2, 1-amino 99.9 3.8E-22 1.3E-26 213.8 22.2 307 182-568 86-426 (428)
148 2x5f_A Aspartate_tyrosine_phen 99.9 5.5E-22 1.9E-26 212.7 23.4 302 182-568 91-428 (430)
149 3piu_A 1-aminocyclopropane-1-c 99.9 1.6E-21 5.6E-26 209.4 26.4 306 182-568 89-431 (435)
150 3ez1_A Aminotransferase MOCR f 99.9 1.1E-21 3.8E-26 209.7 24.4 304 182-571 73-417 (423)
151 2po3_A 4-dehydrase; external a 99.9 1.3E-20 4.3E-25 201.9 32.5 318 179-569 52-386 (424)
152 3ppl_A Aspartate aminotransfer 99.9 8E-22 2.7E-26 211.3 23.1 304 182-571 81-422 (427)
153 2vyc_A Biodegradative arginine 99.9 7.1E-22 2.4E-26 225.7 23.5 321 178-567 204-603 (755)
154 3gbx_A Serine hydroxymethyltra 99.9 7.1E-22 2.4E-26 210.4 21.5 310 178-569 75-396 (420)
155 3g7q_A Valine-pyruvate aminotr 99.9 9.7E-22 3.3E-26 209.4 22.3 309 181-569 77-413 (417)
156 3b46_A Aminotransferase BNA3; 99.9 9.4E-22 3.2E-26 212.3 22.1 305 183-565 99-443 (447)
157 1s0a_A Adenosylmethionine-8-am 99.9 1.1E-20 3.7E-25 202.6 29.8 343 110-568 41-423 (429)
158 3qgu_A LL-diaminopimelate amin 99.9 3.6E-21 1.2E-25 207.5 25.3 300 182-569 114-440 (449)
159 3ndn_A O-succinylhomoserine su 99.9 4.7E-21 1.6E-25 204.9 25.9 307 178-566 80-413 (414)
160 3d6k_A Putative aminotransfera 99.9 3.2E-21 1.1E-25 206.5 24.1 303 182-568 79-417 (422)
161 3ju7_A Putative PLP-dependent 99.9 2.9E-20 9.8E-25 196.4 30.1 319 179-568 36-374 (377)
162 2ord_A Acoat, acetylornithine 99.9 6.9E-21 2.4E-25 201.8 24.9 324 110-567 38-395 (397)
163 3ecd_A Serine hydroxymethyltra 99.9 3.1E-21 1.1E-25 205.7 22.3 311 179-569 78-397 (425)
164 3rq1_A Aminotransferase class 99.9 4.6E-21 1.6E-25 204.6 23.5 297 183-568 84-414 (418)
165 1sff_A 4-aminobutyrate aminotr 99.9 2.3E-20 7.9E-25 199.4 27.6 345 110-568 39-423 (426)
166 3tcm_A Alanine aminotransferas 99.9 4.6E-20 1.6E-24 202.0 30.5 309 183-568 138-493 (500)
167 3asa_A LL-diaminopimelate amin 99.9 6.1E-21 2.1E-25 202.6 22.6 342 110-568 33-392 (400)
168 2ez2_A Beta-tyrosinase, tyrosi 99.9 2.9E-20 9.9E-25 200.8 27.5 319 179-568 75-430 (456)
169 1ax4_A Tryptophanase; tryptoph 99.9 4.4E-21 1.5E-25 207.8 19.6 315 180-568 77-440 (467)
170 3meb_A Aspartate aminotransfer 99.9 1.9E-20 6.4E-25 202.3 22.6 335 110-568 55-443 (448)
171 3h7f_A Serine hydroxymethyltra 99.9 4.9E-20 1.7E-24 199.0 25.3 349 118-569 52-414 (447)
172 3ei9_A LL-diaminopimelate amin 99.9 2.1E-20 7.2E-25 200.4 22.2 332 110-564 56-423 (432)
173 3ri6_A O-acetylhomoserine sulf 99.9 1E-19 3.4E-24 195.3 27.2 160 178-360 81-242 (430)
174 2aeu_A Hypothetical protein MJ 99.8 9.2E-21 3.1E-25 199.9 17.5 295 181-570 60-372 (374)
175 7aat_A Aspartate aminotransfer 99.8 3.5E-20 1.2E-24 196.6 21.2 331 110-566 34-400 (401)
176 3t18_A Aminotransferase class 99.8 5.8E-20 2E-24 195.7 23.0 335 110-564 43-409 (413)
177 3nx3_A Acoat, acetylornithine 99.8 3.1E-19 1E-23 189.0 28.2 331 110-568 34-394 (395)
178 1yaa_A Aspartate aminotransfer 99.8 6.4E-21 2.2E-25 203.1 14.7 328 110-567 35-409 (412)
179 3a8u_X Omega-amino acid--pyruv 99.8 1E-19 3.5E-24 196.3 23.9 353 110-568 48-446 (449)
180 2oat_A Ornithine aminotransfer 99.8 8.3E-19 2.8E-23 188.9 30.7 330 108-568 72-438 (439)
181 3ihj_A Alanine aminotransferas 99.8 2.3E-19 7.9E-24 196.4 26.6 309 180-568 134-492 (498)
182 2eo5_A 419AA long hypothetical 99.8 8.4E-19 2.9E-23 187.5 30.2 332 110-568 40-417 (419)
183 4adb_A Succinylornithine trans 99.8 2.4E-20 8.2E-25 197.8 17.8 331 110-569 37-400 (406)
184 1ajs_A Aspartate aminotransfer 99.8 3.1E-20 1.1E-24 197.6 17.7 335 110-568 36-410 (412)
185 3fsl_A Aromatic-amino-acid ami 99.8 6.9E-20 2.4E-24 193.7 20.3 337 110-566 32-397 (397)
186 1z7d_A Ornithine aminotransfer 99.8 2E-18 6.7E-23 185.6 31.8 333 109-568 62-428 (433)
187 2pb2_A Acetylornithine/succiny 99.8 4E-19 1.4E-23 190.2 26.3 328 110-568 55-417 (420)
188 3bwn_A AT1G70560, L-tryptophan 99.8 3E-20 1E-24 197.1 17.3 285 182-568 71-386 (391)
189 2oqx_A Tryptophanase; lyase, p 99.8 2.7E-20 9.3E-25 201.5 16.9 318 180-568 75-441 (467)
190 4f4e_A Aromatic-amino-acid ami 99.8 1.8E-19 6.2E-24 192.6 23.1 336 110-566 55-419 (420)
191 3f6t_A Aspartate aminotransfer 99.8 3.8E-19 1.3E-23 196.3 24.8 309 199-569 165-525 (533)
192 2q7w_A Aspartate aminotransfer 99.8 7E-20 2.4E-24 193.6 18.0 331 110-566 32-396 (396)
193 2ay1_A Aroat, aromatic amino a 99.8 7.5E-20 2.6E-24 193.4 15.5 294 182-565 72-392 (394)
194 3nmy_A Xometc, cystathionine g 99.8 1.4E-18 4.8E-23 184.8 24.6 168 177-368 65-238 (400)
195 3jzl_A Putative cystathionine 99.8 8.4E-19 2.9E-23 186.8 19.6 173 181-370 61-252 (409)
196 2cjg_A L-lysine-epsilon aminot 99.8 7.1E-18 2.4E-22 182.1 25.8 306 178-568 100-447 (449)
197 3dxv_A Alpha-amino-epsilon-cap 99.8 1.7E-17 6E-22 178.1 28.6 345 110-568 41-424 (439)
198 3pj0_A LMO0305 protein; struct 99.8 1.1E-18 3.8E-23 181.8 17.7 293 178-565 47-358 (359)
199 1zod_A DGD, 2,2-dialkylglycine 99.8 1.7E-17 5.7E-22 177.9 26.7 350 110-568 41-431 (433)
200 3b1d_A Betac-S lyase; HET: PLP 99.7 6.6E-21 2.3E-25 201.7 0.0 300 182-567 69-391 (392)
201 3lws_A Aromatic amino acid bet 99.8 2.4E-18 8.2E-23 179.3 19.0 293 179-566 47-356 (357)
202 3i4j_A Aminotransferase, class 99.8 1.4E-17 5E-22 178.3 25.1 356 110-568 27-427 (430)
203 2hox_A ALLIIN lyase 1; cystein 99.8 1.4E-18 4.9E-23 186.4 16.7 287 182-568 103-424 (427)
204 3n5m_A Adenosylmethionine-8-am 99.8 1.3E-16 4.6E-21 172.0 32.0 352 110-568 47-451 (452)
205 4a6r_A Omega transaminase; tra 99.8 3.9E-17 1.3E-21 176.7 27.1 346 110-569 48-449 (459)
206 3n75_A LDC, lysine decarboxyla 99.8 1.6E-17 5.6E-22 186.9 24.8 310 178-567 194-558 (715)
207 3gju_A Putative aminotransfera 99.8 8E-17 2.8E-21 174.3 28.1 354 110-568 49-455 (460)
208 3tfu_A Adenosylmethionine-8-am 99.8 3.5E-17 1.2E-21 177.1 24.7 345 110-568 71-452 (457)
209 3i16_A Aluminum resistance pro 99.8 2.8E-17 9.7E-22 175.7 21.8 175 181-370 75-269 (427)
210 3dod_A Adenosylmethionine-8-am 99.8 3.8E-16 1.3E-20 168.4 30.4 349 110-568 42-442 (448)
211 4eu1_A Mitochondrial aspartate 99.8 3.2E-17 1.1E-21 174.4 21.6 290 182-566 82-408 (409)
212 3hmu_A Aminotransferase, class 99.8 2.6E-16 8.9E-21 171.0 28.9 348 110-569 53-452 (472)
213 3i5t_A Aminotransferase; pyrid 99.7 3E-16 1E-20 170.7 27.6 352 110-569 52-454 (476)
214 3hvy_A Cystathionine beta-lyas 99.7 2.2E-16 7.7E-21 168.8 24.8 174 181-370 76-269 (427)
215 3l44_A Glutamate-1-semialdehyd 99.7 1.5E-16 5E-21 170.6 23.6 330 110-568 53-429 (434)
216 3fq8_A Glutamate-1-semialdehyd 99.7 5.2E-17 1.8E-21 173.8 19.1 335 110-568 50-426 (427)
217 1ohv_A 4-aminobutyrate aminotr 99.7 4.5E-16 1.6E-20 169.1 26.7 342 108-568 59-470 (472)
218 3ht4_A Aluminum resistance pro 99.7 5.8E-17 2E-21 173.9 17.9 176 179-370 65-258 (431)
219 2epj_A Glutamate-1-semialdehyd 99.7 5.6E-16 1.9E-20 166.2 25.3 337 110-568 54-430 (434)
220 4e77_A Glutamate-1-semialdehyd 99.7 1.3E-16 4.4E-21 170.9 20.3 333 110-568 51-428 (429)
221 3k28_A Glutamate-1-semialdehyd 99.7 2.9E-16 1E-20 168.2 22.9 332 110-568 51-426 (429)
222 2cy8_A D-phgat, D-phenylglycin 99.7 7.9E-16 2.7E-20 166.0 24.3 334 110-569 55-435 (453)
223 2zy4_A L-aspartate beta-decarb 99.7 2.8E-16 9.6E-21 173.6 21.1 158 199-368 166-338 (546)
224 4ffc_A 4-aminobutyrate aminotr 99.7 8.8E-16 3E-20 165.9 24.5 347 110-568 62-448 (453)
225 3oks_A 4-aminobutyrate transam 99.7 3.5E-15 1.2E-19 161.0 27.3 351 110-568 59-450 (451)
226 3ou5_A Serine hydroxymethyltra 99.7 1.1E-14 3.7E-19 152.7 27.5 358 118-567 61-439 (490)
227 2e7u_A Glutamate-1-semialdehyd 99.7 3.2E-15 1.1E-19 159.8 22.4 334 110-566 50-424 (424)
228 3bc8_A O-phosphoseryl-tRNA(SEC 99.6 4E-15 1.4E-19 158.5 20.0 325 178-567 97-441 (450)
229 3k7y_A Aspartate aminotransfer 99.6 6.4E-14 2.2E-18 149.0 22.3 292 183-568 76-404 (405)
230 4ao9_A Beta-phenylalanine amin 99.6 1.5E-13 5.2E-18 147.5 20.7 336 108-569 83-446 (454)
231 3hl2_A O-phosphoseryl-tRNA(SEC 99.5 1.2E-12 4.1E-17 137.9 20.4 326 180-570 117-462 (501)
232 2yky_A Beta-transaminase; tran 99.2 5.4E-15 1.8E-19 159.7 0.0 300 178-568 139-459 (465)
233 4h51_A Aspartate aminotransfer 99.4 3.2E-12 1.1E-16 136.3 18.5 345 105-568 45-416 (420)
234 4atq_A 4-aminobutyrate transam 99.4 1.2E-10 4.3E-15 125.2 27.9 356 108-568 60-454 (456)
235 4e3q_A Pyruvate transaminase; 99.3 4.5E-10 1.5E-14 121.4 25.1 354 109-570 64-469 (473)
236 4a0g_A Adenosylmethionine-8-am 98.7 2.1E-07 7.3E-12 107.1 17.0 227 266-568 577-827 (831)
237 1h9i_I EETI-II, trypsin inhibi 51.7 2.9 9.8E-05 26.5 -0.1 21 12-32 13-35 (36)
238 2hm3_A Nematocyst outer WALL a 48.8 2.6 8.9E-05 25.2 -0.6 18 2-20 9-26 (31)
239 2pq4_B Periplasmic nitrate red 44.4 5.4 0.00018 25.9 0.3 12 48-59 3-14 (35)
240 2yxb_A Coenzyme B12-dependent 35.4 1E+02 0.0036 27.0 7.5 70 229-312 27-97 (161)
241 1y80_A Predicted cobalamin bin 29.2 1.9E+02 0.0063 26.3 8.5 80 229-322 97-181 (210)
242 3gi1_A LBP, laminin-binding pr 29.0 1.8E+02 0.0062 28.1 8.8 78 222-317 178-256 (286)
243 3ecs_A Translation initiation 28.2 1.7E+02 0.006 28.8 8.4 114 183-318 106-229 (315)
244 2o1e_A YCDH; alpha-beta protei 27.0 2.1E+02 0.0072 28.0 8.9 77 222-316 189-266 (312)
245 2i2x_B MTAC, methyltransferase 26.1 1.6E+02 0.0054 28.0 7.6 81 229-323 132-215 (258)
246 1h9h_I EETI-II, trypsin inhibi 24.7 14 0.00049 23.5 -0.1 21 12-32 13-35 (36)
247 1x92_A APC5045, phosphoheptose 23.8 2.2E+02 0.0074 25.3 7.8 32 282-317 113-145 (199)
248 3rpc_A Possible metal-dependen 23.4 3E+02 0.01 25.7 9.1 67 240-313 175-249 (264)
249 3m9w_A D-xylose-binding peripl 22.5 2.2E+02 0.0077 27.0 8.2 75 230-317 14-88 (313)
250 2yva_A DNAA initiator-associat 22.2 2.5E+02 0.0084 24.8 7.8 32 282-317 109-141 (196)
251 4gqr_A Pancreatic alpha-amylas 21.9 35 0.0012 35.6 2.1 29 292-320 69-98 (496)
252 3bbl_A Regulatory protein of L 21.0 3.8E+02 0.013 24.9 9.4 72 231-317 21-92 (287)
253 3jy6_A Transcriptional regulat 20.8 1.8E+02 0.0062 27.1 6.9 70 232-317 21-90 (276)
254 3dbi_A Sugar-binding transcrip 20.8 3.4E+02 0.012 26.0 9.2 73 232-319 77-151 (338)
No 1
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=100.00 E-value=2.1e-40 Score=350.82 Aligned_cols=352 Identities=14% Similarity=0.100 Sum_probs=255.3
Q ss_pred CeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHH
Q 037063 111 NYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMD 190 (588)
Q Consensus 111 ~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~ 190 (588)
..+|||++|.++.|+.|++++..++. ..++||.|. +.+++ .+.+..++++++|+.|++
T Consensus 26 ~~~yl~~agpt~~p~~V~~a~~~~~~-~~~~n~~s~-----------~~~~h----------~~~~~~~~~~~ar~~la~ 83 (386)
T 3qm2_A 26 AQVFNFSSGPAMLPAEVLKLAQQELC-DWHGLGTSV-----------MEISH----------RGKEFIQVAEEAEQDFRD 83 (386)
T ss_dssp -CCEECCSSSCCCCHHHHHHHTCC---------------------------------------------CCHHHHHHHHH
T ss_pred ccCccccCCCCCCCHHHHHHHHHHHH-hccccCccc-----------cccCC----------CCHHHHHHHHHHHHHHHH
Confidence 46899999999999999999976664 345666321 10111 112236788999999999
Q ss_pred HhCCCCCCceEEE-ecCHHHHHHHHHHhCCCCCCCeE-EEcCCCchhHHHHHHHHHHhcCCEEEEEecc-CCCCc-cCHH
Q 037063 191 FMNISEDDYTLVF-TANQSSAFKLLAESYPFYSNPRL-LTVYDHENEAAALMIESSKKRGARVSSAEFA-WPNLR-IHSG 266 (588)
Q Consensus 191 ~lga~~~e~~vvf-t~g~T~al~lv~~s~~~~~gd~l-l~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~-~~~~~-i~~e 266 (588)
++|++ ++++|+| |+|+|+++++++.++ +++||++ ++..++++ .+| ...+++.| +|..++++ .+.+. ++++
T Consensus 84 ll~~~-~~~evif~t~~~T~a~n~ai~~l-~~~gd~v~~~~~~~~~--~~~-~~~a~~~G-~v~~v~~~~~~~G~~~~~~ 157 (386)
T 3qm2_A 84 LLNIP-SNYKVLFCHGGGRGQFAGVPLNL-LGDKTTADYVDAGYWA--ASA-IKEAKKYC-APQIIDAKITVDGKRAVKP 157 (386)
T ss_dssp HHTCC-TTEEEEEEESCTTHHHHHHHHHH-CTTCCEEEEEESSHHH--HHH-HHHHTTTS-EEEEEECEEEETTEEEECC
T ss_pred HhCCC-CCceEEEEcCCchHHHHHHHHhc-cCCCCeEEEEeCCHHH--HHH-HHHHHHhC-CeEEEecCcccCCCCCCch
Confidence 99994 4467999 699999999999999 8999995 45666664 466 46678889 99999986 12444 6777
Q ss_pred HHHHHHhhhccccCCCcceEEEEeCCCCCCCcc-CCHHHHHHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccC
Q 037063 267 KLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGAR-YSYMWMSVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFY 345 (588)
Q Consensus 267 ~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~-~pl~~I~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~ 345 (588)
+++.+|+ ++|++|+++|.+|.||++ .|+++|. +|++++||++|+++ ..++|++.+ |++++|+|
T Consensus 158 ~~~~~l~--------~~t~lV~~~h~et~tG~~i~pi~~i~----~g~~~~vDa~qs~g--~~pidv~~~--~~~~~s~h 221 (386)
T 3qm2_A 158 MREWQLS--------DNAAYLHYCPNETIDGIAIDETPDFG----PEVVVTADFSSTIL--SAPLDVSRY--GVIYAGAQ 221 (386)
T ss_dssp GGGCCCC--------TTCSCEEECSEETTTTEECCCCCCCC----TTCCEEEECTTTTT--SSCCCGGGC--SEEEEETT
T ss_pred HHHhhcC--------CCCcEEEEECCcCCcCEecCchhhhc----CCCEEEEEcccccC--CCCCCcccc--CEEEEecc
Confidence 7776666 789999999999999996 8988875 79999999999998 566776664 56889999
Q ss_pred ccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHH
Q 037063 346 KIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADA 425 (588)
Q Consensus 346 K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~ 425 (588)
|++| |.|+|+||+|+++++++.+.... +.+ ...... .....||+|+.++ +++.+||+++.+
T Consensus 222 K~lG--P~G~g~l~v~~~~~~~~~~~~p~---~~~-------~~~~~~----~~~~~gTp~v~~i---~~l~~Al~~~~~ 282 (386)
T 3qm2_A 222 KNIG--PAGLTLVIVREDLLGKAHESCPS---ILD-------YTVLND----NDSMFNTPPTFAW---YLSGLVFKWLKA 282 (386)
T ss_dssp TTTC--CTTEEEEEEEGGGCSCCCTTSCG---GGC-------HHHHHH----C-------CCSHH---HHHHHHHHHHHH
T ss_pred cccC--CCccEEEEECHHHHhhhcccCCc---HHH-------HHHHhh----cCCCCCCCcHHHH---HHHHHHHHHHHH
Confidence 9998 99999999999998877654321 100 000001 1114689999987 899999999999
Q ss_pred h-CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc-cEEEEEeecCCCCCcCHHHHHHHHHhCCcE
Q 037063 426 L-GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG-PSLAFNVFDWNGTRIDPALVQKLADRHNIS 503 (588)
Q Consensus 426 ~-G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg-~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~ 503 (588)
. |++++.+|.+.|+++++++|+++ ..+....+ +..|+ .+++|++++. .++ ..+...|+++||.
T Consensus 283 ~gG~~~i~~~~~~l~~~l~~~l~~~---------~~~~~~~~--~~~rs~~iv~f~~~~~---~~~-~~~~~~L~~~gI~ 347 (386)
T 3qm2_A 283 QGGVAAMHKINQQKAELLYGVIDNS---------DFYRNDVA--QANRSRMNVPFQLADN---TLD-KVFLEESFAAGLH 347 (386)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHTC---------SSEECCBC--GGGBCSSEEEEEESSG---GGH-HHHHHHHHHTTEE
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHC---------CCcccCCC--HHHcCceEEEEECCCc---ccc-HHHHHHHHHCCCE
Confidence 9 79999999999999999999985 22232222 22454 5999999742 144 4555568889999
Q ss_pred eccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 504 LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 504 v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
++.|..| .| .||+|++.+||.|||++|+++|+++.++
T Consensus 348 ~~~g~~~--------------------------~~--~iRiS~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 348 ALKGHRV--------------------------VG--GMRASIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp CCBCCTT--------------------------TC--SEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCC--------------------------cC--eEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 9988655 23 6999999999999999999999998764
No 2
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=339.87 Aligned_cols=354 Identities=13% Similarity=0.131 Sum_probs=266.5
Q ss_pred eeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHh
Q 037063 113 VCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFM 192 (588)
Q Consensus 113 vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~l 192 (588)
--||.+++++.|+.|++++.+++. ..++|+.|. +.+++ .+.+..++++++|+.+++++
T Consensus 14 ~~~n~at~~~~p~~Vl~a~~~~~~-~~~~n~~s~-----------~~~~h----------r~~~~~~~~~~ar~~la~ll 71 (377)
T 3e77_A 14 GTENLYFQSMLPHSVLLEIQKELL-DYKGVGISV-----------LEMSH----------RSSDFAKIINNTENLVRELL 71 (377)
T ss_dssp -CCCEECSCCCCHHHHHHHHHTSS-SGGGSSSCT-----------TTCCT----------TSHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCCHHHHHHHHHHHH-hcccCCccc-----------cccCC----------CCHHHHHHHHHHHHHHHHHh
Confidence 458999999999999999987764 355666321 11011 11223789999999999999
Q ss_pred CCCCCCceEEE-ecCHHHHHHHHHHhCCCCC--CCeE-EEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHH
Q 037063 193 NISEDDYTLVF-TANQSSAFKLLAESYPFYS--NPRL-LTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKL 268 (588)
Q Consensus 193 ga~~~e~~vvf-t~g~T~al~lv~~s~~~~~--gd~l-l~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l 268 (588)
|++ ++++|+| |+|+|+++++++.++ +.+ ||++ ++..++++ ..| .+.+++.|+.++.+++++ ++.++++++
T Consensus 72 ~~~-~~~evif~t~~~T~a~n~a~~~l-~~~~~Gd~v~~~~~g~~~--~~~-~~~a~~~G~~~~~~~~~~-~~~~~~~~~ 145 (377)
T 3e77_A 72 AVP-DNYKVIFLQGGGCGQFSAVPLNL-IGLKAGRCADYVVTGAWS--AKA-AEEAKKFGTINIVHPKLG-SYTKIPDPS 145 (377)
T ss_dssp TCC-TTEEEEEESSHHHHHHHHHHHHH-GGGSTTCEEEECCCSHHH--HHH-HHHHTTTSEEEECSCCCS-SSCSCCCGG
T ss_pred CCC-CCCeEEEEcCchHHHHHHHHHhc-cCCCCCCeEEEEECCHHH--HHH-HHHHHHhCCceEEeccCC-CcCCCCChH
Confidence 995 3467999 589999999999998 554 8985 45666764 456 577888999888888874 344566666
Q ss_pred HHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccC
Q 037063 269 MKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIF 348 (588)
Q Consensus 269 ~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~ 348 (588)
+..++ ++|++|+++|.+|.||+++|+ | ++++|++++||++|+++ ..++|++.+ |++++|.||++
T Consensus 146 ~~~i~--------~~t~lV~~~h~et~tG~~~pi--i--~~~~~~~~~vD~~q~~g--~~~id~~~~--~~~~~s~~K~~ 209 (377)
T 3e77_A 146 TWNLN--------PDASYVYYCANETVHGVEFDF--I--PDVKGAVLVCDMSSNFL--SKPVDVSKF--GVIFAGAQKNV 209 (377)
T ss_dssp GCCCC--------TTCSCEEEESEETTTTEECSS--C--CCCTTCCEEEECTTTTT--SSCCCGGGC--SEEEEEGGGTT
T ss_pred HhccC--------CCccEEEEeCccCchheEchh--h--hccCCCEEEEEcccccC--CCCCchhhc--CEEEEeccccc
Confidence 55554 789999999999999999999 4 67899999999999998 566776664 46899999999
Q ss_pred CCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHh-C
Q 037063 349 GENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL-G 427 (588)
Q Consensus 349 G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~-G 427 (588)
| |.|+|+||+|+++++.+++.... +.+ ...... ...+.||+++.++ +++.+||+++.+. |
T Consensus 210 g--p~G~g~l~~~~~~l~~~~~~~p~---~~~-------~~~~~~----~~~~~~Tp~v~~i---~~l~~al~~l~~~GG 270 (377)
T 3e77_A 210 G--SAGVTVVIVRDDLLGFALRECPS---VLE-------YKVQAG----NSSLYNTPPCFSI---YVMGLVLEWIKNNGG 270 (377)
T ss_dssp S--CTTCEEEEEETTSCSCCCTTSCG---GGC-------HHHHHT----TTTCSSCCCHHHH---HHHHHHHHHHHHTTH
T ss_pred C--CCccEEEEEcHHHHhhccCCCCc---hhh-------HHHHhh----cCCCCCCchHHHH---HHHHHHHHHHHHccC
Confidence 8 99999999999998877654321 110 000000 1115789998886 8999999999999 7
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc-EEEEEeecCCC-CCcCHHHHHHHHHhCCcEec
Q 037063 428 LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP-SLAFNVFDWNG-TRIDPALVQKLADRHNISLS 505 (588)
Q Consensus 428 ~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~-iv~f~~~~~~g-~~i~~~~v~~~l~~~gI~v~ 505 (588)
++++.+|.+.|+++++++|+++ +++.+. +..+..|++ +++|++++.++ ..++ ..+...+.++||.++
T Consensus 271 ~~~i~~~~~~l~~~l~~~L~~~---------~g~~~~-~~~~~~rs~~ivsf~~~~~~~~~~~~-~~~l~~l~~~Gi~~~ 339 (377)
T 3e77_A 271 AAAMEKLSSIKSQTIYEIIDNS---------QGFYVC-PVEPQNRSKMNIPFRIGNAKGDDALE-KRFLDKALELNMLSL 339 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTS---------TTSEEC-CSCGGGBCSSEEEEEESSTTCCHHHH-HHHHHHHHHTTEESC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc---------CCceec-CCCHHHcCCcEEEEEcCCCCCchhHH-HHHHHHHHHCCcEEe
Confidence 9999999999999999999985 566653 323334665 69999987332 1111 234555667899988
Q ss_pred cccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 506 CGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 506 ~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.|..+ .| .+|+|++.++|.|||++|+++|++++++
T Consensus 340 ~g~~~--------------------------~g--~iRiS~~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 340 KGHRS--------------------------VG--GIRASLYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp BCCTT--------------------------TC--SEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCc--------------------------CC--EEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 87422 23 6999999999999999999999998765
No 3
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=2.4e-36 Score=320.56 Aligned_cols=390 Identities=19% Similarity=0.252 Sum_probs=294.8
Q ss_pred hHHHHHhhhccCCCC----CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccc
Q 037063 95 QADRIRAQDYFHLSL----NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSW 170 (588)
Q Consensus 95 ~~~~iR~~~f~~l~~----~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~ 170 (588)
+++.+|+ +||.++. ++.+|||+++.++.|+.+++++.+.+.. ..+||++. .+ .
T Consensus 4 ~~~~~r~-~f~~~~~~~~g~~~i~l~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~--------------------~~-~ 60 (406)
T 1kmj_A 4 SVDKVRA-DFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRH-GYAAVHRG--------------------IH-T 60 (406)
T ss_dssp CHHHHHH-TCGGGGCEETTEECEECCTTTCCCCCHHHHHHHHHHHHH-TCCCCSSC--------------------SS-H
T ss_pred CHHHHHH-hCcccccccCCCceEEecCCccCCCCHHHHHHHHHHHHh-hcCCCCCC--------------------cc-h
Confidence 4678886 6998841 1479999999999999999998766542 34455310 00 0
Q ss_pred cccCCchhHHHHHHHHHHHHHhCC-CCCCceEEEecCHHHHHHHHHHhCC---CCCCCeEE-EcCCCchhHHHHHHHHHH
Q 037063 171 LQYGSEESELESKIRKRIMDFMNI-SEDDYTLVFTANQSSAFKLLAESYP---FYSNPRLL-TVYDHENEAAALMIESSK 245 (588)
Q Consensus 171 ~~~g~~~~~~~~~~r~~ia~~lga-~~~e~~vvft~g~T~al~lv~~s~~---~~~gd~ll-~~~e~~s~~~~~~~~~a~ 245 (588)
++....+..+++|+.|++++++ +++ .|+||+|+|+|+.+++.++. +++||+|+ ....|++....+ ...++
T Consensus 61 --~~~~~~~~~~~l~~~la~~~~~~~~~--~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~-~~~~~ 135 (406)
T 1kmj_A 61 --LSAQATEKMENVRKRASLFINARSAE--ELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPW-QMLCA 135 (406)
T ss_dssp --HHHHHHHHHHHHHHHHHHHTTCSCGG--GEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHH-HHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHcCCCCCC--eEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHH-HHHHH
Confidence 0111256678999999999999 444 49999999999999999985 78999965 566777644333 45667
Q ss_pred hcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC
Q 037063 246 KRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS 324 (588)
Q Consensus 246 ~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~ 324 (588)
..|++++.++.+ +++.+|+++|+++|+ +++++|++++++|+||.++|+++| ++|+++|+++|+|+++..+
T Consensus 136 ~~g~~~~~~~~~-~~~~~d~~~l~~~l~--------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g 206 (406)
T 1kmj_A 136 RVGAELRVIPLN-PDGTLQLETLPTLFD--------EKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVM 206 (406)
T ss_dssp HHTCEEEEECBC-TTSCBCGGGHHHHCC--------TTEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred hCCCEEEEEecC-CCCCcCHHHHHHHhc--------cCCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcC
Confidence 789999999997 567899999999997 679999999999999999999999 9999999999999998876
Q ss_pred CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 325 KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 325 ~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
. .++++...++|++++|+||.+| |.|+|++++++++++.+.+...++ +......... ...+...+ .+| +.||
T Consensus 207 ~--~~~~~~~~~~d~~~~s~~K~~g--~~G~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~-~~~-~~~~ 278 (406)
T 1kmj_A 207 H--HPVDVQALDCDFYVFSGHKLYG--PTGIGILYVKEALLQEMPPWEGGG-SMIATVSLSE-GTTWTKAP-WRF-EAGT 278 (406)
T ss_dssp T--SCCCHHHHTCSEEEEEGGGTTS--CTTCEEEEECHHHHHHCCCSSCST-TSEEEEETTT-EEEECCTT-GGG-CCSS
T ss_pred C--CCCcccccCCCEEEEEchhccC--CCCcEEEEEeHHHHhhcCCcccCC-Cceeeccccc-ccccCCCc-hhc-cCCC
Confidence 2 2333334459999999999888 778999999999988888766553 3222111000 00011111 145 6788
Q ss_pred CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCC
Q 037063 405 SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWN 484 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~ 484 (588)
+++.++ +++..+++++.+.+++++.++.+.+++++.+.|.++ ++++++.+. .+++++.|.+.+
T Consensus 279 ~~~~~~---~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~~~---~~~~~~~~~~~~-- 341 (406)
T 1kmj_A 279 PNTGGI---IGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESV---------PDLTLYGPQ---NRLGVIAFNLGK-- 341 (406)
T ss_dssp CCHHHH---HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTS---------TTEEEESCT---TCCSEEEEEETT--
T ss_pred CCHHHH---HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcC---------CCeEEecCC---CcCCEEEEEECC--
Confidence 887775 666688898887789999999999999999999884 578888753 257898888753
Q ss_pred CCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCC-ccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 485 GTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSG-VSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 485 g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g-~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
++...+.+.|.++||.++.|..|... +... .| ...||+|++.++|.||++++++.|+
T Consensus 342 ---~~~~~~~~~l~~~gi~v~~g~~~~~~------------~~~~-------~g~~~~iRis~~~~~t~~~i~~~~~~l~ 399 (406)
T 1kmj_A 342 ---HHAYDVGSFLDNYGIAVRTGHHCAMP------------LMAY-------YNVPAMCRASLAMYNTHEEVDRLVTGLQ 399 (406)
T ss_dssp ---CCHHHHHHHHHHTTEECEEECTTCHH------------HHHH-------TTCSCEEEEECCTTCCHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHhhCCcEEEeccccchH------------HHHh-------cCCCCeEEEEeecCCCHHHHHHHHHHHH
Confidence 45777888889999999999887521 1111 22 2399999999999999999999999
Q ss_pred Hhhhh
Q 037063 564 RFLDA 568 (588)
Q Consensus 564 ~~l~~ 568 (588)
++++.
T Consensus 400 ~~~~~ 404 (406)
T 1kmj_A 400 RIHRL 404 (406)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98753
No 4
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.1e-36 Score=319.70 Aligned_cols=375 Identities=17% Similarity=0.167 Sum_probs=281.9
Q ss_pred hHHHHHhhhccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccC
Q 037063 95 QADRIRAQDYFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYG 174 (588)
Q Consensus 95 ~~~~iR~~~f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g 174 (588)
+++.+|+ +||.++ ++.+|||+++.++.|+.+++++.+.+.. ..+||++ ...++
T Consensus 12 ~~~~~r~-~fp~~~-~~~~~ld~~~~~~~~~~v~~a~~~~~~~-~~~~~~~------------------------~~~~~ 64 (406)
T 3cai_A 12 DVARVRG-LHPSLG-DGWVHFDAPAGMLIPDSVATTVSTAFRR-SGASTVG------------------------AHPSA 64 (406)
T ss_dssp CHHHHHH-TCTTTT-SSCEECBGGGCCCCCHHHHHHHHHHHHH-CCSSSCS------------------------SSHHH
T ss_pred cHHHHHH-hhhhcC-CCeEEEeCCCcCCCCHHHHHHHHHHHHh-cCCCCCC------------------------ccHHH
Confidence 6778886 699994 3599999999999999999998766532 2334411 00011
Q ss_pred CchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhC--CCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEE
Q 037063 175 SEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESY--PFYSNPRLL-TVYDHENEAAALMIESSKKRGARV 251 (588)
Q Consensus 175 ~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~--~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v 251 (588)
....+..+++|+.+++++|+++++ |+||+|+|+++.+++.++ .+++||+|+ ...+|++....+ ..+++..|+++
T Consensus 65 ~~~~~~~~~l~~~la~~~g~~~~~--v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~-~~~~~~~g~~v 141 (406)
T 3cai_A 65 RRSAAVLDAAREAVADLVNADPGG--VVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPW-LRAAHRYGAKV 141 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGG--EEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHH-HHHHHHHBCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCe--EEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHH-HHHHHhcCCeE
Confidence 112567889999999999997554 999999999999999887 478999965 566777633333 45556679999
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCC
Q 037063 252 SSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTL 330 (588)
Q Consensus 252 ~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l 330 (588)
+.++++..++.+|+++|+++|+ +++++|++++++|+||.+.|+++| ++|+++|+++|+|+++..+. .++
T Consensus 142 ~~v~~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~--~~~ 211 (406)
T 3cai_A 142 KWAEVDIETGELPTWQWESLIS--------KSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPY--RLL 211 (406)
T ss_dssp EEECCCTTTCCCCGGGHHHHCC--------TTEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTT--CCC
T ss_pred EEEecCcccCCcCHHHHHHHhC--------CCceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCC--CCC
Confidence 9999875567899999999997 689999999999999999999999 99999999999999998762 223
Q ss_pred CCCCCCCcEEEeccCccCCCCCCceE-EEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccc
Q 037063 331 GLSLFKPDFLICSFYKIFGENPSGFG-CLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISG 409 (588)
Q Consensus 331 ~l~~~~~D~vv~S~~K~~G~~P~G~G-~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~ 409 (588)
++..+++|++++|+||++| |. +| ++++++++++.+++..... +. .. + .+| +.||++..+
T Consensus 212 ~~~~~~~d~~~~s~~K~~g--~~-~G~~~~~~~~~~~~l~~~~~~~-~~-----------~~---~-~~~-~~~t~~~~~ 271 (406)
T 3cai_A 212 DIRETDADVVTVNAHAWGG--PP-IGAMVFRDPSVMNSFGSVSTNP-YA-----------TG---P-ARL-EIGVHQFGL 271 (406)
T ss_dssp CHHHHCCSEEEEEGGGGTS--CS-CEEEEESCHHHHHTSCCCCSCT-TC-----------CG---G-GGG-CCSCCCHHH
T ss_pred CchhcCCCEEEeehhhhcC--CC-cCeEEEEehHHHhhcCCcccCC-CC-----------Cc---c-ccc-cCCCccHHH
Confidence 3333458999999999988 64 88 9999998887776553110 10 00 0 144 678888777
Q ss_pred hhhHHHHHHHHHHHHHhC--------------HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE
Q 037063 410 VSSKLVECKGLDHADALG--------------LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS 475 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G--------------~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i 475 (588)
+ +++..+++++..+| ++++.++.+.+++++.+.|.++ ++++++.+.. .++++
T Consensus 272 ~---~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~~~~--~~~~~ 337 (406)
T 3cai_A 272 L---AGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSL---------PLVMLIGRPE--AQIPV 337 (406)
T ss_dssp H---HHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---------TTEEECCCCS--SBCSE
T ss_pred H---HHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcC---------CCeEEcCCcc--ccCCE
Confidence 5 67778899888765 7889999999999999999984 5788877642 35678
Q ss_pred EEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHH
Q 037063 476 LAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDT 555 (588)
Q Consensus 476 v~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv 555 (588)
+.|.+.+ ++...+.+.|.++||.++.|... . .. ..+.. ..+...||+|++.+++.|||
T Consensus 338 ~~~~~~~-----~~~~~~~~~L~~~gi~v~~g~~~-~-----~~----~~~g~-------~~~~~~iRis~~~~~t~e~i 395 (406)
T 3cai_A 338 VSFAVHK-----VPADRVVQRLADNGILAIANTGS-R-----VL----DVLGV-------NDVGGAVTVGLAHYSTMAEV 395 (406)
T ss_dssp EEEEETT-----BCHHHHHHHHHHTTEECEECCSC-H-----HH----HHHTT-------TTTTCCEEEECCTTCCHHHH
T ss_pred EEEEECC-----cCHHHHHHHHHHCCcEEecCChH-H-----HH----HHcCC-------CCCCCeEEEEeecCCCHHHH
Confidence 8888764 45777888888899999987511 0 00 00000 01123899999999999999
Q ss_pred HHHHHHHHHh
Q 037063 556 YRLWAFVSRF 565 (588)
Q Consensus 556 ~~li~~l~~~ 565 (588)
+++++.|+++
T Consensus 396 ~~~~~~l~~~ 405 (406)
T 3cai_A 396 DQLVRALASL 405 (406)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHHh
Confidence 9999998763
No 5
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=4.8e-37 Score=322.19 Aligned_cols=351 Identities=13% Similarity=0.109 Sum_probs=263.2
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
...+|+=++|.+++|+.|++++.+++. ..++||.|. +.+ ++ .+.+..++++++|+.++
T Consensus 3 ~~~~~~f~pgpt~~~~~V~~a~~~~~~-~~~~~~~s~-----------~~~--------~h--r~~~~~~~~~~~r~~la 60 (361)
T 3m5u_A 3 AMRKINFSAGPSTLPLEILEQAQKELC-DYQGRGYSI-----------MEI--------SH--RTKVFEEVHFGAQEKAK 60 (361)
T ss_dssp -CCCEECCSSSCCCCHHHHHHHHHTSS-SGGGSSSCG-----------GGS--------CS--SSHHHHHHHHHHHHHHH
T ss_pred ccceEeecCCCCCCcHHHHHHHHHHHH-hcccCCcee-----------ecc--------CC--CCHHHHHHHHHHHHHHH
Confidence 346788889999999999999987764 345666321 100 01 12234789999999999
Q ss_pred HHhCCCCCCceEEE-ecCHHHHHHHHHHhCCCCCCCeE-EEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCc-cCHH
Q 037063 190 DFMNISEDDYTLVF-TANQSSAFKLLAESYPFYSNPRL-LTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLR-IHSG 266 (588)
Q Consensus 190 ~~lga~~~e~~vvf-t~g~T~al~lv~~s~~~~~gd~l-l~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~-i~~e 266 (588)
+++|+++ +++|+| |+|+|+++++++.++ + +||++ +....+++ ..| ...+++.|++|..+++++.... ++++
T Consensus 61 ~ll~~~~-~~~v~f~t~~~T~a~n~~~~~~-~-~~~~~~~i~~~~~~--~~~-~~~a~~~G~~v~~~~~~~~g~~~~~~~ 134 (361)
T 3m5u_A 61 KLYELND-DYEVLFLQGGASLQFAMIPMNL-A-LNGVCEYANTGVWT--KKA-IKEAQILGVNVKTVASSEESNFDHIPR 134 (361)
T ss_dssp HHHTCCT-TEEEEEESSHHHHHHHHHHHHH-C-CSSCEEEEECSHHH--HHH-HHHHHHTTCCEEEEEECTTTTSCSCCC
T ss_pred HHhCCCC-CceEEEEcCcHHHHHHHHHHhc-C-CCCeEEEEeCCHHH--HHH-HHHHHHcCCceEEEecccCcCCCcCCh
Confidence 9999963 356999 999999999999998 5 78863 23333443 456 4567888999999999844322 4555
Q ss_pred HHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCc
Q 037063 267 KLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYK 346 (588)
Q Consensus 267 ~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K 346 (588)
+ + |+ ++|++|+++|.+|.||+++|. | ++ +|++++||++|+++ ..++|++. +|++++|+||
T Consensus 135 ~--~-l~--------~~t~lv~~~~~e~~tG~~~~~--i--~~-~~~~~~vD~~q~~g--~~~id~~~--~d~~~~s~~K 194 (361)
T 3m5u_A 135 V--E-FS--------DNADYAYICSNNTIYGTQYQN--Y--PK-TKTPLIVDASSDFF--SRKVDFSN--IALFYGGVQK 194 (361)
T ss_dssp C--C-CC--------TTSSEEEEESEETTTTEECSS--C--CC-CSSCEEEECGGGTT--SSCCCCTT--EEEEEEETTT
T ss_pred h--h-cC--------CCCCEEEEeCCCCCcceeCCc--c--cc-cCCEEEEEcccccC--CCCCCccc--CCEEEEechh
Confidence 5 3 76 789999999999999999882 4 33 49999999999998 56677764 7999999999
Q ss_pred cCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHh
Q 037063 347 IFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL 426 (588)
Q Consensus 347 ~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~ 426 (588)
++| |.|+|+||+++++++.+++.+.. .+.+ ....... .. ..||+++.++ +++.+||+++.+.
T Consensus 195 ~~g--p~G~g~l~~~~~~~~~~~~~~~p--~~~~-------~~~~~~~---~~-~~~Tp~v~~i---~~l~~al~~l~~~ 256 (361)
T 3m5u_A 195 NAG--ISGLSCIFIRKDMLERSKNKQIP--SMLN-------YLTHAEN---QS-LFNTPPTFAI---YMFNLEMDWLLNQ 256 (361)
T ss_dssp TSS--CTTCEEEEEEHHHHHHHHTCCCC--GGGC-------HHHHHHT---TT-CSSCCCHHHH---HHHHHHHHHHHTT
T ss_pred ccC--CCccEEEEEcHHHHhhhcCCCCC--ceee-------hHHHhhc---CC-CCCCccHHHH---HHHHHHHHHHHHc
Confidence 998 99999999999998877663222 1110 0000001 11 4689998886 8999999999999
Q ss_pred -CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCe-EEEeCCCCCCCc-ccEEEEEeecCCCCCcCHHHHHHHHHhCCcE
Q 037063 427 -GLILISNRARYLINWLANALMNLHHPHSETGIPL-VRIYGPKVMFDR-GPSLAFNVFDWNGTRIDPALVQKLADRHNIS 503 (588)
Q Consensus 427 -G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~-v~i~~p~~~~~r-g~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~ 503 (588)
|++++.+|.+.|+++++++|+++ ++ ++++.+. ..+ ..+++|++++.. .++ ..+...|+++||.
T Consensus 257 gG~~~i~~~~~~l~~~l~~~L~~~---------~g~~~~~~~~--~~rs~~ivsf~~~~~~--~~~-~~~~~~L~~~gI~ 322 (361)
T 3m5u_A 257 GGLDKVHEKNSQKATMLYECIDLS---------NGFYKGHADK--KDRSLMNVSFNIAKNK--DLE-PLFVKEAEEAGMI 322 (361)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTS---------TTSEEESSCG--GGBCSSEEEEEESSCT--THH-HHHHHHHHHTTEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHC---------CCeeeccCCH--HHcCCeEEEEECCCch--hhh-HHHHHHHHHCCCE
Confidence 89999999999999999999985 43 3665542 234 469999997511 144 3566788899999
Q ss_pred eccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 504 LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 504 v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
++.|..| .| .||+|++.+||.|||++++++|+++.++
T Consensus 323 ~~~g~~~--------------------------~g--~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 323 GLKGHRI--------------------------LG--GIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp CCBCCTT--------------------------TC--SEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EecCCCc--------------------------cC--eEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 9888543 23 6999999999999999999999998765
No 6
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=5.3e-35 Score=311.81 Aligned_cols=391 Identities=19% Similarity=0.224 Sum_probs=292.5
Q ss_pred hhHHHHHhhhccCCCCCC------eeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCccccccccccc
Q 037063 94 DQADRIRAQDYFHLSLNN------YVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNL 167 (588)
Q Consensus 94 ~~~~~iR~~~f~~l~~~~------~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~ 167 (588)
..+..+|+ +||.+ ++ .+|||++..++.|+.+++++.+.+.. ..+||++.
T Consensus 8 ~~~~~~r~-~f~~~--~~~~~g~~~i~l~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~--------------------- 62 (420)
T 1t3i_A 8 SLAATVRQ-DFPIL--NQEINGHPLVYLDNAATSQKPRAVLEKLMHYYEN-DNANVHRG--------------------- 62 (420)
T ss_dssp CHHHHHGG-GCGGG--SCEETTEECEECBTTTCCCCCHHHHHHHHHHHHH-TCCCC--C---------------------
T ss_pred HHHHHHHH-hCCcc--ccccCCCceEEecCCccCCCCHHHHHHHHHHHHh-ccCCCCcc---------------------
Confidence 45567886 69987 44 79999999999999999988666532 33444210
Q ss_pred ccccccCCchhHHHHHHHHHHHHHhCC-CCCCceEEEecCHHHHHHHHHHhCC---CCCCCeEE-EcCCCchhHHHHHHH
Q 037063 168 NSWLQYGSEESELESKIRKRIMDFMNI-SEDDYTLVFTANQSSAFKLLAESYP---FYSNPRLL-TVYDHENEAAALMIE 242 (588)
Q Consensus 168 ~s~~~~g~~~~~~~~~~r~~ia~~lga-~~~e~~vvft~g~T~al~lv~~s~~---~~~gd~ll-~~~e~~s~~~~~~~~ 242 (588)
...|+....+..+++|+.|+++++. +++ .|+||+|+|+|+.+++.++. +++||+|+ ....|++....+ ..
T Consensus 63 --~~~y~~~~~~~~~~l~~~la~~~~~~~~~--~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~ 137 (420)
T 1t3i_A 63 --AHQLSVRATDAYEAVRNKVAKFINARSPR--EIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPW-QM 137 (420)
T ss_dssp --CSHHHHHHHHHHHHHHHHHHHHTTCSCGG--GEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHH-HH
T ss_pred --cchHHHHHHHHHHHHHHHHHHHcCCCCCC--eEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHH-HH
Confidence 0012211145678999999999999 544 49999999999999999984 68899965 556677643323 45
Q ss_pred HHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCC
Q 037063 243 SSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATA 321 (588)
Q Consensus 243 ~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~ 321 (588)
.++..|++++.++++ .++.+|+++|+++|+ +++++|++++++|+||..+|+++| ++|+++|+++|+|+++
T Consensus 138 ~~~~~g~~~~~v~~~-~~~~~d~~~l~~~l~--------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~ 208 (420)
T 1t3i_A 138 VAAKTGAVLKFVQLD-EQESFDLEHFKTLLS--------EKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQ 208 (420)
T ss_dssp HHHHHCCEEEEECBC-TTSSBCHHHHHHHCC--------TTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHhcCcEEEEeccC-CCCCcCHHHHHHhhC--------CCceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhh
Confidence 666789999999997 677899999999997 679999999999999999999999 9999999999999998
Q ss_pred cCCCCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccccccccc
Q 037063 322 LGSKDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSK 401 (588)
Q Consensus 322 ~~~~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e 401 (588)
..+. ..+++...++|++++|+||++| |.|+|++++++++++.+.+...++ +........ ...+...+ .+| +
T Consensus 209 ~~~~--~~~~~~~~~~di~~~s~sK~~~--~~g~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~-~~~-~ 279 (420)
T 1t3i_A 209 SAPH--YPLDVQLIDCDWLVASGHKMCA--PTGIGFLYGKEEILEAMPPFFGGG-EMIAEVFFD--HFTTGELP-HKF-E 279 (420)
T ss_dssp TTTT--SCCCHHHHTCSEEEEEGGGTTS--CTTCEEEEECHHHHHHSCCCSCST-TSEEEECSS--CEEECCTT-GGG-C
T ss_pred ccCC--ccCchhhcCCCEEEEehhhhcC--CCceEEEEEchHHHhhcCceecCC-Ccccccccc--ccCCCCch-hhc-c
Confidence 8762 2233333458999999999888 778999999999888887765543 322211100 00111111 145 5
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCC-CcccEEEEEe
Q 037063 402 FPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMF-DRGPSLAFNV 480 (588)
Q Consensus 402 ~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~-~rg~iv~f~~ 480 (588)
.|++++.+. +++..+++++.+.|++++.++.+.+++++.+.|.++ ++++++.+.... .+++++.|.+
T Consensus 280 ~~~~~~~~~---~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~~~~~~~~~~~~~~~~ 347 (420)
T 1t3i_A 280 AGTPAIAEA---IALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQI---------PQLRLYGPNPKHGDRAALASFNV 347 (420)
T ss_dssp CSSCCHHHH---HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTC---------TTEEEESCCGGGSCBCSEEEEEE
T ss_pred CCCccHHHH---HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhC---------CCeEEeCCCccccccCCEEEEEE
Confidence 678777764 566668898888789999999999999999999984 578888764211 2478998887
Q ss_pred ecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCC-ccEEEEecCCCCCHHHHHHHH
Q 037063 481 FDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSG-VSVVTAALGCLTNFEDTYRLW 559 (588)
Q Consensus 481 ~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g-~~~vRvSlg~~~t~eDv~~li 559 (588)
.+ .+...+.+.|.++||.++.|..|... .... .| ...||+|++.+++.+|+++++
T Consensus 348 ~~-----~~~~~~~~~l~~~gi~v~~~~~~~~~------------~~~~-------~g~~~~iRis~~~~~~~~~i~~~~ 403 (420)
T 1t3i_A 348 AG-----LHASDVATMVDQDGIAIRSGHHCTQP------------LHRL-------FDASGSARASLYFYNTKEEIDLFL 403 (420)
T ss_dssp TT-----BCHHHHHHHHHTTTEECBCSCTTCHH------------HHHH-------TTCCCCEEEECCTTCCHHHHHHHH
T ss_pred CC-----CCHHHHHHHHHHCCeEEeeccccchH------------HHHh-------cCCCCeEEEecCCCCCHHHHHHHH
Confidence 54 45777888899999999999877421 1111 22 238999999999999999999
Q ss_pred HHHHHhhhh
Q 037063 560 AFVSRFLDA 568 (588)
Q Consensus 560 ~~l~~~l~~ 568 (588)
+.|+++++.
T Consensus 404 ~~l~~~~~~ 412 (420)
T 1t3i_A 404 QSLQATIRF 412 (420)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998765
No 7
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=9.8e-36 Score=312.64 Aligned_cols=362 Identities=17% Similarity=0.167 Sum_probs=271.6
Q ss_pred eeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHH
Q 037063 112 YVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDF 191 (588)
Q Consensus 112 ~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~ 191 (588)
.||||+++.++.|+.+++++.+.+.. .++||++. + .++....+.++++|+.++++
T Consensus 1 ~iyld~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~---------------------~---~~~~~~~~~~~~~~~~la~~ 55 (382)
T 4hvk_A 1 MAYFDYTSAKPVDERILEAMLPYMTE-SFGNPSSV---------------------H---SYGFKAREAVQEAREKVAKL 55 (382)
T ss_dssp -CBCBTTTCCCCCHHHHHHHHHHHHT-SCCCTTCS---------------------S---HHHHHHHHHHHHHHHHHHHH
T ss_pred CEeecCCCcCCCCHHHHHHHHHHHHh-hcCCCccc---------------------c---hHHHHHHHHHHHHHHHHHHH
Confidence 48999999999999999998776643 45566321 0 01112367888999999999
Q ss_pred hCCCCCCceEEEecCHHHHHHHHHHhCCC---CCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHH
Q 037063 192 MNISEDDYTLVFTANQSSAFKLLAESYPF---YSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGK 267 (588)
Q Consensus 192 lga~~~e~~vvft~g~T~al~lv~~s~~~---~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~ 267 (588)
+|++++ .|++|+|+|+|+.+++.++.+ ++||+|+ ...+|++ .... ...++..|++++.++++ +++.+|+++
T Consensus 56 ~~~~~~--~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~-~~~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~ 130 (382)
T 4hvk_A 56 VNGGGG--TVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMS-VINP-AKFLQKQGFEVEYIPVG-KYGEVDVSF 130 (382)
T ss_dssp TTCTTE--EEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHH-HHHH-HHHHHHTTCEEEEECBC-TTSCBCHHH
T ss_pred cCCCcC--eEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHH-HHHH-HHHHHhcCCEEEEeccC-CCCCcCHHH
Confidence 999765 499999999999999998832 8999966 5567775 3222 34456789999999998 778899999
Q ss_pred HHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCc
Q 037063 268 LMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYK 346 (588)
Q Consensus 268 l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K 346 (588)
|+++++ +++++|++++++|+||.+.|+++| ++|+++|+ +|+|+++..+ ...+++...++|++++|+||
T Consensus 131 l~~~i~--------~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~--~~~~~~~~~~~d~~~~s~~K 199 (382)
T 4hvk_A 131 IDQKLR--------DDTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVG--QIEVDVEKIGADMLTISSND 199 (382)
T ss_dssp HHHHCC--------TTEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBT--TBCCCHHHHTCSEEEEESGG
T ss_pred HHHHhc--------cCceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcC--CCCCCchhcCCCEEEEeHHH
Confidence 999998 689999999999999999999999 99999999 9999998876 23333333458999999999
Q ss_pred cCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHh
Q 037063 347 IFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL 426 (588)
Q Consensus 347 ~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~ 426 (588)
++| |.|+|+++++++. .+.+...++ +. . ..+ +.||++...+ +++..+++++.+
T Consensus 200 ~~g--~~g~g~~~~~~~~--~~~~~~~~~-~~--------------~---~~~-~~~~~~~~~~---~~~~~al~~~~~- 252 (382)
T 4hvk_A 200 IYG--PKGVGALWIRKEA--KLQPVILGG-GQ--------------E---NGL-RSGSENVPSI---VGFGKAAEITAM- 252 (382)
T ss_dssp GTS--CTTCEEEEEETTC--CCCCSSCSS-CT--------------G---GGT-SCSCCCHHHH---HHHHHHHHHHHH-
T ss_pred hcC--CCceEEEEEcCcc--CcCcccccC-CC--------------c---Ccc-ccCCcCHHHH---HHHHHHHHHHHh-
Confidence 988 7799999999876 455555442 11 0 033 5777777765 666778876654
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEecc
Q 037063 427 GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSC 506 (588)
Q Consensus 427 G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~ 506 (588)
+++++.++.+++++++.+.|.++ ++++++.+.. ...+.++.|.+.+ .+...+.+.|.++||.++.
T Consensus 253 ~~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~ 317 (382)
T 4hvk_A 253 EWREEAERLRRLRDRIIDNVLKI---------EESYLNGHPE-KRLPNNVNVRFSY-----IEGESIVLSLDMAGIQAST 317 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTS---------TTEEECSCSS-SBCTTEEEEEETT-----CCHHHHHHHHHHTTCBCBC
T ss_pred hHHHHHHHHHHHHHHHHHHHhcC---------CCeEEeCCcc-ccCCCEEEEEECC-----CCHHHHHHHHHHCCEEEee
Confidence 57999999999999999999874 6788887642 1223588888865 4577888888889999999
Q ss_pred ccccCcccccchHHHHHHHHhhhcCCCCCcCC------ccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 507 GFLQNIFFSGEYEQERVRVLETRSGTNETRSG------VSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 507 G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g------~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
|..|.+....... .+.. .| .+.||++++.++|.||++++++.|++++++.
T Consensus 318 g~~~~~~~~~~~~-----~~~~--------~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~ 373 (382)
T 4hvk_A 318 GSACSSKTLQPSH-----VLMA--------CGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERL 373 (382)
T ss_dssp C--------CCCH-----HHHH--------TTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCCcchH-----HHHH--------cCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9888643211110 0010 11 1389999999999999999999999988653
No 8
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=100.00 E-value=7.3e-36 Score=324.50 Aligned_cols=382 Identities=14% Similarity=0.113 Sum_probs=275.6
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
++.+|||+++.|+.|+.+.+++.+.+.. +++.. .+.+... + ....++.+++|++++
T Consensus 66 ~~~iyld~~~~g~~p~~v~~~i~~~l~~--~~~~~--------------------~~~~~~~-~-~~~~~~~~~l~~~la 121 (465)
T 3e9k_A 66 ENAIYFLGNSLGLQPKMVKTYLEEELDK--WAKIA--------------------AYGHEVG-K-RPWITGDESIVGLMK 121 (465)
T ss_dssp CBCEECBTTTSCCEETTHHHHHHHHHHH--HHHHG--------------------GGGGTSS-S-SCGGGTTHHHHGGGH
T ss_pred CCeEEecCCccCCChHHHHHHHHHHHHH--HHhhC--------------------CcccccC-C-ccHHHhHHHHHHHHH
Confidence 3689999999999999887766544421 11110 0000000 0 001344568999999
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCC---CeEE-EcCCCchhHHHHHHHHHHhcCCEE-----EEEeccCCC
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYPFYSN---PRLL-TVYDHENEAAALMIESSKKRGARV-----SSAEFAWPN 260 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~g---d~ll-~~~e~~s~~~~~~~~~a~~~G~~v-----~~v~~~~~~ 260 (588)
+++|+++++ |+||+|+|+++++++.++ .++| ++|+ ....|++..+.+ ...++..|+++ ..++.+ .+
T Consensus 122 ~~~g~~~~~--v~~t~g~t~al~~~~~~~-~~~~~~~~~Vl~~~~~~~s~~~~~-~~~~~~~G~~~~~~~v~~~~~~-~~ 196 (465)
T 3e9k_A 122 DIVGANEKE--IALMNALTVNLHLLMLSF-FKPTPKRYKILLEAKAFPSDHYAI-ESQLQLHGLNIEESMRMIKPRE-GE 196 (465)
T ss_dssp HHHTCCGGG--EEECSCHHHHHHHHHHHH-CCCCSSSCEEEEETTCCHHHHHHH-HHHHHHTTCCHHHHEEEECCCT-TC
T ss_pred HHcCCCcCC--EEEECCHHHHHHHHHHHh-ccccCCCCEEEEcCCcCCchHHHH-HHHHHHcCCcceeeeEEEecCC-CC
Confidence 999998665 999999999999999998 5554 4465 566777655544 45677889875 344554 56
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcE
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDF 339 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~ 339 (588)
+.+|.++|+++|++. .+++++|++++++|+||.++|+++| ++|+++|++|++|++|..+ ..++++..+++||
T Consensus 197 ~~~d~~~l~~~i~~~-----~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g--~~~~~~~~~~~D~ 269 (465)
T 3e9k_A 197 ETLRIEDILEVIEKE-----GDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVG--NVELYLHDWGVDF 269 (465)
T ss_dssp SSCCHHHHHHHHHHH-----GGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTT--TSCCCHHHHTCCE
T ss_pred CccCHHHHHHHHHhc-----CCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcC--CcCCchhhcCCCE
Confidence 789999999999620 1479999999999999999999999 9999999999999999987 4455555566999
Q ss_pred EEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc-cccccccCCCCCccchhhHHHHHH
Q 037063 340 LICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL-DESSQSKFPESSISGVSSKLVECK 418 (588)
Q Consensus 340 vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~-~~~~f~e~GT~~~~~~~~~~al~~ 418 (588)
+++|+||+++.+|.|+|+++++++.++.+.+...|+.+........... .+... ...+| +.||+++.++ +++.+
T Consensus 270 ~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~~gt~~~~~~---~a~~a 344 (465)
T 3e9k_A 270 ACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDN-KLQLIPGVCGF-RISNPPILLV---CSLHA 344 (465)
T ss_dssp EEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCS-CCCBCSSGGGG-CCSCCCHHHH---HHHHH
T ss_pred EEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCC-CcCcCCChHHh-ccCCccHHHH---HHHHH
Confidence 9999999872128889999999999888877665531110000000000 01111 11367 8899998886 78889
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCC-CCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHH
Q 037063 419 GLDHADALGLILISNRARYLINWLANALMNLHHPH-SETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLA 497 (588)
Q Consensus 419 aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~-~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l 497 (588)
+++.+...|++++.++...+++++.+.|.++.... ..++.++++++.|.+...++++++|.+.. +...+.+.|
T Consensus 345 al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~------~~~~l~~~L 418 (465)
T 3e9k_A 345 SLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV------PNKDVFQEL 418 (465)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECC------TTCCHHHHH
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC------CHHHHHHHH
Confidence 99999999999999999999999999998841100 00012578999886555578999998862 234567777
Q ss_pred HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec-CCCCCHHHHHHHHHHHHHhhhh
Q 037063 498 DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL-GCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 498 ~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl-g~~~t~eDv~~li~~l~~~l~~ 568 (588)
.++||.++.+ +..+||+|+ +++++++||+++++.|++++++
T Consensus 419 ~~~Gi~v~~~------------------------------~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 419 EKRGVVCDKR------------------------------NPNGIRVAPVPLYNSFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp HTTTEECEEE------------------------------TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC
T ss_pred HHCCEEEecC------------------------------CCCEEEEeCcccCCCHHHHHHHHHHHHHHHHh
Confidence 8889988632 112899999 8999999999999999998875
No 9
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=3e-34 Score=302.92 Aligned_cols=377 Identities=14% Similarity=0.119 Sum_probs=277.0
Q ss_pred hHHHHHhhhccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccC
Q 037063 95 QADRIRAQDYFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYG 174 (588)
Q Consensus 95 ~~~~iR~~~f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g 174 (588)
.++++|+ +|+.+ ++.+|||+++.++.|+.+++++.+.+......++ .+...|.
T Consensus 3 ~~~~~r~-~f~~~--~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~------------------------~~~~~y~ 55 (390)
T 1elu_A 3 MITPSLH-QFPGL--ANKTYFNFGGQGILPTVALEAITAMYGYLQENGP------------------------FSIAANQ 55 (390)
T ss_dssp --------CCGGG--TTSEECCTTTCCCCCHHHHHHHHHHHHHHHHHCS------------------------SSHHHHH
T ss_pred chHHHHH-hcCCC--CCeEEecCCccCCCCHHHHHHHHHHHHHHhccCC------------------------cchhhHH
Confidence 4668885 69977 7899999999999999999988666532111111 0000011
Q ss_pred CchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEE
Q 037063 175 SEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSS 253 (588)
Q Consensus 175 ~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~ 253 (588)
.......++|+.|++++|+++++ |+||+|+|+|+.+++.++.+++||+|++ ...|++ ....+...++..|++++.
T Consensus 56 -~~~~~~~~l~~~la~~~g~~~~~--v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~-~~~~~~~~~~~~g~~~~~ 131 (390)
T 1elu_A 56 -HIQQLIAQLRQALAETFNVDPNT--ITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPG-IIAIVQAIAARFGITYRF 131 (390)
T ss_dssp -HHHHHHHHHHHHHHHHTTSCGGG--EEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHH-HHHHHHHHHHHHCCEEEE
T ss_pred -HHHHHHHHHHHHHHHHcCCCHHH--EEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccH-HHHHHHHHHHHhCcEEEE
Confidence 01356789999999999997654 9999999999999999987789999664 556665 332234556777999999
Q ss_pred EeccC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHH----HcCcEEEEeCCCcCCCCC
Q 037063 254 AEFAW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAA----EKGWHVLLDATALGSKDM 327 (588)
Q Consensus 254 v~~~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~----~~g~~vvvDaa~~~~~d~ 327 (588)
++.+. .++.+|+++|+++|+ +++++|++++++|+||..+|+++| ++|+ ++|+++|+|+++..+ .
T Consensus 132 v~~~~~~~~~~d~~~l~~~i~--------~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g--~ 201 (390)
T 1elu_A 132 FPVAATLNQGDAAAVLANHLG--------PKTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAG--S 201 (390)
T ss_dssp ECCGGGSSSSCHHHHHHTTCC--------TTEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBT--T
T ss_pred EcCCCCCCccchHHHHHHhcC--------CCceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccC--C
Confidence 99863 356789999998887 679999999999999999999999 9999 999999999998876 2
Q ss_pred CCCCCCCCCCcEEEeccCc-cCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 328 DTLGLSLFKPDFLICSFYK-IFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 328 ~~l~l~~~~~D~vv~S~~K-~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
.++++....+|+++.|+|| ++| |.|+|++++++++++.+.+...|+ +......... ...+.... .+| +.||++
T Consensus 202 ~~~~~~~~~~d~~~~s~~K~~~~--~~g~G~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~-~~~~~~~~-~~~-~~~~~~ 275 (390)
T 1elu_A 202 LPLDFSRLEVDYYAFTGHKWFAG--PAGVGGLYIHGDCLGEINPTYVGW-RSITYGAKGE-PTGWAEGG-KRF-EVATSA 275 (390)
T ss_dssp BCCCTTTSCCSEEEEESSSTTCC--CTTCEEEEECTTTGGGCCCCSCCT-TTEEECTTSC-EEEECSGG-GGG-CCSCCC
T ss_pred cCCChhhcCCCEEEccccccccC--CCceEEEEECHHhHhhcCCccccC-CcccccccCc-ccccccch-Hhh-CCCCCC
Confidence 3444555669999999999 666 789999999999988887766553 3222110000 00000000 144 567877
Q ss_pred ccchhhHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCC
Q 037063 407 ISGVSSKLVECKGLDHADALG-LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNG 485 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G-~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g 485 (588)
.... +++..+++.+...| ++++.++.+.+++++.+.|.++ ++++++.|. ..+++++.|.+.. +
T Consensus 276 ~~~~---~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~~--~~~~~~~~~~~~~--~ 339 (390)
T 1elu_A 276 YPQY---AGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQL---------PHVHCLATS--APQAGLVSFTVDS--P 339 (390)
T ss_dssp HHHH---HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHS---------TTEEESCSS--CCSSSEEEEEECS--S
T ss_pred HHHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhc---------CCcEEecCc--cccccEEEEEcCC--C
Confidence 6654 56678898887777 8999999999999999999984 578888753 2467888887742 1
Q ss_pred CCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 486 TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 486 ~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
++...+.+.|.++||.++.|. +.+.||+|++++++.+|++++++.|+++
T Consensus 340 --~~~~~~~~~l~~~gi~v~~~~-----------------------------~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 340 --LGHRAIVQKLEEQRIYLRTIA-----------------------------DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp --SCHHHHHHHHHHTTEECEEET-----------------------------TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred --CCHHHHHHHHHHCCEEEEecC-----------------------------CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 457777777788999998762 1128999999999999999999998764
No 10
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=1.2e-34 Score=305.13 Aligned_cols=366 Identities=17% Similarity=0.154 Sum_probs=269.7
Q ss_pred eeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHH
Q 037063 112 YVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDF 191 (588)
Q Consensus 112 ~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~ 191 (588)
++|||+++.++.|+.+++++.+.+.. .++||++. + .++....+.++++|+.++++
T Consensus 1 ~~yld~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~---------------------~---~~~~~~~~~~~~l~~~la~~ 55 (382)
T 4eb5_A 1 MAYFDYTSAKPVDERILEAMLPYMTE-SFGNPSSV---------------------H---SYGFKAREAVQEAREKVAKL 55 (382)
T ss_dssp -CBCBTTTCCCCCHHHHHHHHHHHHT-SCCCTTCS---------------------S---HHHHHHHHHHHHHHHHHHHH
T ss_pred CeeeccCCCCCCCHHHHHHHHHHHHh-ccCCCCCC---------------------c---HHHHHHHHHHHHHHHHHHHH
Confidence 37999999999999999998776643 45555320 0 00111256788999999999
Q ss_pred hCCCCCCceEEEecCHHHHHHHHHHhCC---CCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHH
Q 037063 192 MNISEDDYTLVFTANQSSAFKLLAESYP---FYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGK 267 (588)
Q Consensus 192 lga~~~e~~vvft~g~T~al~lv~~s~~---~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~ 267 (588)
+|++++ .|++|+|+|+|+.+++.++. .++||+|++ ...|++ .... ...++..|++++.++++ +++.+|+++
T Consensus 56 ~g~~~~--~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~-~~~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~ 130 (382)
T 4eb5_A 56 VNGGGG--TVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMS-VINP-AKFLQKQGFEVEYIPVG-KYGEVDVSF 130 (382)
T ss_dssp HTCTTE--EEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHH-HHHH-HHHHTTTTCEEEEECBC-TTSCBCHHH
T ss_pred hCCCCC--eEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchH-HHHH-HHHHHhCCcEEEEeccC-CCCccCHHH
Confidence 999754 49999999999999999982 178999664 556665 3332 33445679999999998 678899999
Q ss_pred HHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCc
Q 037063 268 LMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYK 346 (588)
Q Consensus 268 l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K 346 (588)
|+++|+ +++++|++++++|+||..+|+++| ++|+++|++ |+|+++..+. .++++..+++|++++|+||
T Consensus 131 l~~~i~--------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~--~~~~~~~~~~di~~~s~sK 199 (382)
T 4eb5_A 131 IDQKLR--------DDTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQ--IEVDVEKIGADMLTISSND 199 (382)
T ss_dssp HHHHCC--------TTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTT--BCCCHHHHTCSEEEEETGG
T ss_pred HHHHhc--------CCCeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCC--cccCccccCCCEEEeehHH
Confidence 999997 678999999999999999999999 999999999 9999988762 2333333358999999999
Q ss_pred cCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHh
Q 037063 347 IFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL 426 (588)
Q Consensus 347 ~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~ 426 (588)
++| |.|+|+++++++. .+.+...++ +. . ..+ ..||++...+ +++..+++.+.+
T Consensus 200 ~~g--~~g~G~~~~~~~~--~l~~~~~~~-~~--------------~---~~~-~~~~~~~~~~---~~~~~al~~~~~- 252 (382)
T 4eb5_A 200 IYG--PKGVGALWIRKEA--KLQPVILGG-GQ--------------E---NGL-RSGSENVPSI---VGFGKAAEITAM- 252 (382)
T ss_dssp GTC--CSSCEEEEEETTC--CCCCSSCSS-CT--------------G---GGT-SCSCCCHHHH---HHHHHHHHHHHH-
T ss_pred hcC--CCceEEEEEcccc--ccCceecCC-Cc--------------c---ccc-cCCCccHHHH---HHHHHHHHHHHH-
Confidence 988 7799999999874 344443331 11 0 022 4567776654 566788888766
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEecc
Q 037063 427 GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSC 506 (588)
Q Consensus 427 G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~ 506 (588)
+++++.++.+.+++++.+.|.++ ++++++.+.. ...++++.|.+.+ ++...+.+.|.++||.++.
T Consensus 253 ~~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~ 317 (382)
T 4eb5_A 253 EWREEAERLRRLRDRIIDNVLKI---------EESYLNGHPE-KRLPNNVNVRFSY-----IEGESIVLSLDMAGIQAST 317 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTS---------TTEEECSCSS-SBCTTEEEEEETT-----SCHHHHHHHHHHHTCBCBC
T ss_pred hHHHHHHHHHHHHHHHHHHHhhC---------CCeEEeCCcc-cCCCCEEEEEeCC-----cCHHHHHHHHHHCCEEEec
Confidence 58899999999999999999874 5688876532 1236688888764 4577787878889999999
Q ss_pred ccccCcccccchHHHHHHHHhhhcCCCCC-cCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 507 GFLQNIFFSGEYEQERVRVLETRSGTNET-RSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 507 G~~c~~~~~~~~~~~~~~~l~~~~~~~~~-~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
|..|.+....... .+... +.. ..+.+.||+|++.+++.||++++++.|+++++.
T Consensus 318 g~~~~~~~~~~~~-----~~~~~---g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (382)
T 4eb5_A 318 GSACSSKTLQPSH-----VLMAC---GLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIER 372 (382)
T ss_dssp CCGGGTSSCCCCH-----HHHHT---TCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCcccH-----HHHHc---CCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 9877643211110 00000 000 001238999999999999999999999998865
No 11
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=1.2e-33 Score=302.36 Aligned_cols=374 Identities=16% Similarity=0.119 Sum_probs=276.1
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhccc-CcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHS-SAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRI 188 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~-~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~i 188 (588)
++.+|||+++.++.|+.+++++.+.+.. ..+++|++.. + .++....+.++++++.+
T Consensus 21 ~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~--------------------~---~~~~~~~~~~~~l~~~l 77 (423)
T 3lvm_A 21 KLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRS--------------------H---RFGWQAEEAVDIARNQI 77 (423)
T ss_dssp CSSEECBTTTCCCCCHHHHHHHTTSSSTTSCCSCTTCTT--------------------S---HHHHHHHHHHHHHHHHH
T ss_pred CCCEeecCCCcCCCCHHHHHHHHHHHhhcccccCCCccc--------------------c---chhHHHHHHHHHHHHHH
Confidence 6899999999999999999998766531 3455553200 0 01112257788999999
Q ss_pred HHHhCCCCCCceEEEecCHHHHHHHHHHhCC---CCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccC
Q 037063 189 MDFMNISEDDYTLVFTANQSSAFKLLAESYP---FYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIH 264 (588)
Q Consensus 189 a~~lga~~~e~~vvft~g~T~al~lv~~s~~---~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~ 264 (588)
++++|+++++ |+||+|+|+|+.+++.++. .++||+|++ ...|++ .... ...++..|++++.++.+ +++.+|
T Consensus 78 a~~~~~~~~~--v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~-~~~~-~~~~~~~g~~~~~v~~~-~~~~~d 152 (423)
T 3lvm_A 78 ADLVGADPRE--IVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKA-VLDT-CRQLEREGFEVTYLAPQ-RNGIID 152 (423)
T ss_dssp HHHHTCCGGG--EEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHH-HHHH-HHHHHHTTCEEEEECCC-TTSCCC
T ss_pred HHHcCCCCCe--EEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchH-HHHH-HHHHHHcCCEEEEeccC-CCCccC
Confidence 9999997654 9999999999999998872 137999664 556665 3322 23346779999999998 678899
Q ss_pred HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEec
Q 037063 265 SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICS 343 (588)
Q Consensus 265 ~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S 343 (588)
+++|+++|+ +++++|++++++|+||...|+++| ++|+++|++||+|+++..+ ..++++....+|++++|
T Consensus 153 ~~~l~~~i~--------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~--~~~~~~~~~~~di~~~s 222 (423)
T 3lvm_A 153 LKELEAAMR--------DDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVG--KLPIDLSQLKVDLMSFS 222 (423)
T ss_dssp HHHHHHHCC--------TTEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTT--TSCCCTTTSCCSEEEEE
T ss_pred HHHHHHhcC--------CCcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcC--CCCcChhhcCCCEEEec
Confidence 999999998 689999999999999999999999 9999999999999998876 23445555569999999
Q ss_pred cCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHH
Q 037063 344 FYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHA 423 (588)
Q Consensus 344 ~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l 423 (588)
+||++| |.|+|+++++++....+.+...++ +.. ..+ ..+|++.... +++..+++.+
T Consensus 223 ~sK~~g--~~g~G~~~~~~~~~~~~~~~~~~~-~~~-----------------~~~-~~~~~~~~~~---~a~~~al~~~ 278 (423)
T 3lvm_A 223 GHKIYG--PKGIGALYVRRKPRVRIEAQMHGG-GHE-----------------RGM-RSGTLPVHQI---VGMGEAYRIA 278 (423)
T ss_dssp STTTTS--CSSCEEEEECBTTBCCCCCSSCSS-CTT-----------------TTT-CCSCCCHHHH---HHHHHHHHHH
T ss_pred hHHhcC--CCCeEEEEEeccccCCCCccccCC-ccc-----------------ccc-cCCCCCHHHH---HHHHHHHHHH
Confidence 999888 778999999998887777766542 110 022 4667776664 6667888877
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcE
Q 037063 424 DALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNIS 503 (588)
Q Consensus 424 ~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~ 503 (588)
... ++++.++.+.+++++.+.|.++ ++++++.+.. ...+.++.|.+.+ .+...+.+.|.+ |.
T Consensus 279 ~~~-~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~l~~~l~~--i~ 340 (423)
T 3lvm_A 279 KEE-MATEMERLRGLRNRLWNGIKDI---------EEVYLNGDLE-HGAPNILNVSFNY-----VEGESLIMALKD--LA 340 (423)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHTTS---------TTEEEESCST-TBCTTEEEEEETT-----SCHHHHHHHTTT--EE
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcC---------CCEEEeCCcc-ccCCCeEEEEeCC-----CCHHHHHHHHhh--he
Confidence 665 7899999999999999999874 6788887643 1234688888754 457777777766 99
Q ss_pred eccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhhh
Q 037063 504 LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDADF 570 (588)
Q Consensus 504 v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~~ 570 (588)
++.|..|.++............+.. ..+...||++++..++.|||+++++.|++++++..
T Consensus 341 v~~g~~~~~~~~~~~~~~~~~g~~~-------~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~ 400 (423)
T 3lvm_A 341 VSSGSACTSASLEPSYVLRALGLND-------ELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLR 400 (423)
T ss_dssp CBCCCC-----CCCCHHHHHHTCCH-------HHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred eccCccccCCCccccHHHHHhCCCc-------cccCceEEEECCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 9999888653221111000000000 00013899999999999999999999999987643
No 12
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=100.00 E-value=1.2e-33 Score=303.50 Aligned_cols=384 Identities=14% Similarity=0.092 Sum_probs=267.1
Q ss_pred HHhhhccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchh
Q 037063 99 IRAQDYFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEES 178 (588)
Q Consensus 99 iR~~~f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~ 178 (588)
.|..+|+++ .+.+|||+++.++.|+.+++++.+.+.. .+++|++. + ..+....
T Consensus 8 ~~~~~~~~~--~~~~~Ld~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~---------------------~---~~~~~~~ 60 (432)
T 3a9z_A 8 ARGSVESPP--NRKVYMDYNATTPLEPEVIQAVTEAMKE-AWGNPSSS---------------------Y---VAGRKAK 60 (432)
T ss_dssp ------------CCEECBTTTCCCCCHHHHHHHHHHHHH-CCSCTTCS---------------------S---HHHHHHH
T ss_pred ccccccCCC--CCcEEeeCCccCCCCHHHHHHHHHHHHH-hcCCCccC---------------------c---HHHHHHH
Confidence 355678887 7899999999999999999998766643 44555210 0 0011125
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCC--------CCCC-------------eE-EEcCCCchhH
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPF--------YSNP-------------RL-LTVYDHENEA 236 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~--------~~gd-------------~l-l~~~e~~s~~ 236 (588)
+.++++|+++++++|+++++ |+||+|+|+|+.+++.++ . ++|| +| ++..+|++..
T Consensus 61 ~~~~~l~~~la~~~g~~~~~--v~~~~g~t~a~~~~~~~~-~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~ 137 (432)
T 3a9z_A 61 DIINTARASLAKMIGGKPQD--IIFTSGGTESNNLVIHST-VRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIR 137 (432)
T ss_dssp HHHHHHHHHHHHHHTCCGGG--EEEESCHHHHHHHHHHHH-HHHHHHHHHHC------------CCCEEEEETTCCHHHH
T ss_pred HHHHHHHHHHHHHcCCCcCe--EEEeCChHHHHHHHHHHH-HhhhhhccccCCccccccccccccCCeEEEecCcchhHH
Confidence 67889999999999997654 999999999999999887 3 4674 43 3566777643
Q ss_pred HHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcC---
Q 037063 237 AALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKG--- 312 (588)
Q Consensus 237 ~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g--- 312 (588)
. .+..+++..|++++.+++++.++.+|+++|+++|+ +++++|++++++|+||.++|+++| ++|+++|
T Consensus 138 ~-~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~--------~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~ 208 (432)
T 3a9z_A 138 L-PLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVR--------PTTCLVTIMLANNETGVIMPISEISRRIKALNQIR 208 (432)
T ss_dssp H-HHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCC--------TTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhcc--------CCceEEEEECcccCcccccCHHHHHHHHHhcCccc
Confidence 3 33566677899999999974477899999999887 679999999999999999999999 9999999
Q ss_pred -------cEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcc-hhcccCCCCCCCceEeeecC
Q 037063 313 -------WHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSS-ASVLSGSTSSVSTIMGIEPS 384 (588)
Q Consensus 313 -------~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~-~~~l~~~~~g~~g~v~~~~~ 384 (588)
+++|+|+++..+ ..++++....+|++++|+||++| |. +|+++++++. ...+.+...++ +..
T Consensus 209 ~~~~~~~~~livDea~~~~--~~~~~~~~~~~d~~~~s~~K~~g--~~-~G~~~~~~~~~~~~~~~~~~~~-~~~----- 277 (432)
T 3a9z_A 209 AASGLPRVLVHTDAAQALG--KRRVDVEDLGVDFLTIVGHKFYG--PR-IGALYVRGVGKLTPLYPMLFGG-GQE----- 277 (432)
T ss_dssp HHHTCCCCEEEEECTTTTT--TSCCCHHHHCCSEEEEEGGGTTC--CS-CEEEEETTBTTTBCCCCSCCSS-CGG-----
T ss_pred ccccCCceEEEEEchhhhC--CcccChhhcCCCEEEEehhHhcC--Cc-ceEEEEccccccCCcCceeecC-Ccc-----
Confidence 999999998776 23334333458999999999988 76 9999999876 44565555442 110
Q ss_pred CCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEe
Q 037063 385 FSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIY 464 (588)
Q Consensus 385 ~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~ 464 (588)
..+ +.||.+..++ +++.++++++.+ +++++.++.+.+++++.+.|.++. | ..+.++
T Consensus 278 ------------~~~-~~~~~~~~~~---~a~~aal~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~------g-~~~~~~ 333 (432)
T 3a9z_A 278 ------------RNF-RPGTENTPMI---AGLGKAADLVSE-NCETYEAHMRDIRDYLEERLEAEF------G-KRIHLN 333 (432)
T ss_dssp ------------GGT-SCSCCCHHHH---HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH------G-GGEEES
T ss_pred ------------ccc-cCCCcCHHHH---HHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHhcc------C-CcEEEe
Confidence 033 5678877764 677788888766 589999999999999999998741 1 125555
Q ss_pred CCCCCC-CcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCC-cCCccEE
Q 037063 465 GPKVMF-DRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNET-RSGVSVV 542 (588)
Q Consensus 465 ~p~~~~-~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~-~~g~~~v 542 (588)
+|.... ..+.+++|.+.+.. .+...+.+.+ .+|.++.|..|.++...... ..+... |.. ..+.++|
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l--~~i~~~~G~~~~~~~~~~~~----~~l~~~---g~~~~~~~~~i 401 (432)
T 3a9z_A 334 SRFPGVERLPNTCNFSIQGSQ---LRGYMVLAQC--QTLLASVGASCHSDHEDRPS----PVLLSC---GIPVDVARNAV 401 (432)
T ss_dssp SCCTTCCBCTTEEEEEECSTT---CCHHHHHHHC--SSEECBSSCGGGGGGTTSCC----HHHHHT---TCCHHHHTTEE
T ss_pred CCCCcccCCCCEEEEEeCCCC---CcHHHHHHHh--cCeEEeccccccCCCCCCcc----HHHHhc---CCCccccCceE
Confidence 552111 23458888887521 2344444433 48999999888653211000 011110 000 0011389
Q ss_pred EEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 543 TAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 543 RvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
|+|++.++|.||++++++.|++++++
T Consensus 402 Ris~~~~~t~eei~~~~~~l~~~~~~ 427 (432)
T 3a9z_A 402 RLSVGRSTTRAEVDLIVQDLKQAVNQ 427 (432)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998753
No 13
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=1.1e-33 Score=299.15 Aligned_cols=364 Identities=12% Similarity=0.047 Sum_probs=268.3
Q ss_pred hccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 103 DYFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 103 ~f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
+||.+ .+.+|||+++.++.|+.+++++.+.+.. + ++....+.++
T Consensus 2 ~fp~~--~~~~yl~~~~~~~~~~~v~~a~~~~~~~------~----------------------------~~~~~~~~~~ 45 (392)
T 2z9v_A 2 RYPEH--ADPVITLTAGPVNAYPEVLRGLGRTVLY------D----------------------------YDPAFQLLYE 45 (392)
T ss_dssp CCCTT--SCCSEECSSSCCCCCHHHHHHTTSCCCC------T----------------------------TSHHHHHHHH
T ss_pred CcccC--CCcceeecCCCcCCCHHHHHHHhccccc------c----------------------------ccHHHHHHHH
Confidence 58988 7889999999999999999997544311 0 0001246678
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCC
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWPNL 261 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~ 261 (588)
++|+.+++++|+++++ |++|+|+|+|+.+++.++ +++||+|++ ...|++. .+ ...++..|++++.++++ +++
T Consensus 46 ~l~~~la~~~g~~~~~--v~~t~g~t~a~~~~~~~~-~~~gd~Vl~~~~~~~~~--~~-~~~~~~~g~~~~~v~~~-~~~ 118 (392)
T 2z9v_A 46 KVVDKAQKAMRLSNKP--VILHGEPVLGLEAAAASL-ISPDDVVLNLASGVYGK--GF-GYWAKRYSPHLLEIEVP-YNE 118 (392)
T ss_dssp HHHHHHHHHTTCSSCC--EEESSCTHHHHHHHHHHH-CCTTCCEEEEESSHHHH--HH-HHHHHHHCSCEEEEECC-TTS
T ss_pred HHHHHHHHHhCCCCCE--EEEeCCchHHHHHHHHHh-cCCCCEEEEecCCcccH--HH-HHHHHHcCCceEEeeCC-CCC
Confidence 9999999999997554 999999999999999998 899999664 5566652 33 45567789999999997 567
Q ss_pred ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEE
Q 037063 262 RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFL 340 (588)
Q Consensus 262 ~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~v 340 (588)
.+|+++|++++++ .+++++|++++++|+||..+|+++| ++|+++|+++|+|+++..+ ..++++..+++|++
T Consensus 119 ~~d~~~l~~~l~~------~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g--~~~~~~~~~~~d~~ 190 (392)
T 2z9v_A 119 AIDPQAVADMLKA------HPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFG--GMKTHPEDCKADIY 190 (392)
T ss_dssp CCCHHHHHHHHHH------CTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBT--TBSCCGGGGTCSEE
T ss_pred CCCHHHHHHHHhc------CCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccC--CcccccccccceEE
Confidence 8999999999951 1478999999999999999999999 9999999999999998876 22334444458999
Q ss_pred EeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCc-e-EeeecCCCcccccccccccccccCCCCCccchhhHHHHHH
Q 037063 341 ICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVST-I-MGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECK 418 (588)
Q Consensus 341 v~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g-~-v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~ 418 (588)
++|+||+++. |.|+|++++++++++.+++...|. | . ..... .+..-....+ ..||++..++ +++..
T Consensus 191 ~~s~sK~~~~-~~g~G~l~~~~~~~~~l~~~~~g~-~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~---~a~~~ 258 (392)
T 2z9v_A 191 VTGPNKCLGA-PPGLTMMGVSERAWAKMKANPLAP-RASMLSIVD------WENAWSRDKP-FPFTPSVSEI---NGLDV 258 (392)
T ss_dssp EECSSSTTCC-CSCCEEEEECHHHHHHHHTCTTSC-CSSTTCSGG------GTTTTSTTSC-CSSCCCHHHH---HHHHH
T ss_pred EecCcccccC-CCceeEEEECHHHHHHhhhccCCC-CceeccHHH------HHhhhcccCC-CCCCCCHHHH---HHHHH
Confidence 9999995442 789999999998887776432100 0 0 00000 0000000022 4667776664 66778
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHH
Q 037063 419 GLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLAD 498 (588)
Q Consensus 419 aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~ 498 (588)
+++.+.+.|++++.++.+.+++++.+.|.++ +++++.|......+.++.|.+++ + ++...+.+.|.
T Consensus 259 al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~l~~~L~ 324 (392)
T 2z9v_A 259 ALDLYLNEGPEAVWARHALTAKAMRAGVTAM----------GLSVWAASDSIASPTTTAVRTPD--G--VDEKALRQAAR 324 (392)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----------TCCBSSSSGGGBCTTEEEEECCT--T--CCHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHc----------CCeeccCCccccCCceEEEECCC--C--CCHHHHHHHHH
Confidence 8998888889999999999999999999884 24455532111246778888752 1 45677777666
Q ss_pred hC-CcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec-CCCCCHHHHHHHHHHHHHhhhhh
Q 037063 499 RH-NISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL-GCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 499 ~~-gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl-g~~~t~eDv~~li~~l~~~l~~~ 569 (588)
++ ||.++.|..+ .+...||+|+ +++++.+|++++++.|++++++.
T Consensus 325 ~~~gi~v~~g~~~--------------------------~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~ 371 (392)
T 2z9v_A 325 ARYGVVFSSGRGE--------------------------TLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAA 371 (392)
T ss_dssp HHHCEECEECCGG--------------------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred hcCCEEEecCCCC--------------------------CCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHc
Confidence 65 9999887432 1112899995 55899999999999999988754
No 14
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=100.00 E-value=2.3e-33 Score=299.37 Aligned_cols=396 Identities=11% Similarity=0.115 Sum_probs=274.8
Q ss_pred HHHHHHHhCCCCCCchhHHHHHhhhccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcc
Q 037063 79 SFANFTKVFPQYLQTDQADRIRAQDYFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFF 158 (588)
Q Consensus 79 ~~~~f~~~~p~y~~~~~~~~iR~~~f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~ 158 (588)
.++..++.. ..++++|+ +||.+ ++.+|||+++.++.|+.+++++.+.+.. .++++.+
T Consensus 5 ~~~~~~~~~------~~~~~~r~-~f~~~--~~~~yld~~~~~~~~~~v~~a~~~~l~~-~~~~~~~------------- 61 (416)
T 1qz9_A 5 NDCLALDAQ------DSLAPLRQ-QFALP--EGVIYLDGNSLGARPVAALARAQAVIAE-EWGNGLI------------- 61 (416)
T ss_dssp HHHHHHHHT------CTTGGGGG-GBCCC--TTCEECCTTTSCCCBTTHHHHHHHHHHT-CCCCCGG-------------
T ss_pred hHHHhcccc------chhHHHHH-hCCCC--CCeEeecCCCcCCCcHHHHHHHHHHHHH-HHhccCc-------------
Confidence 355666644 35668886 69977 7899999999999999999998766632 2333310
Q ss_pred cccccccccccccccCCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhC-CC----CCCCe-EEEc-CC
Q 037063 159 DICYRSVNLNSWLQYGSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESY-PF----YSNPR-LLTV-YD 231 (588)
Q Consensus 159 ~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~-~~----~~gd~-ll~~-~e 231 (588)
++. +.....+.++++|+.+++++|+++++ |+||+|+|+++.+++.++ .+ ++||+ |++. ..
T Consensus 62 ---------~~~--~~~~~~~~~~~l~~~la~~~g~~~~~--v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~ 128 (416)
T 1qz9_A 62 ---------RSW--NSAGWRDLSERLGNRLATLIGARDGE--VVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSN 128 (416)
T ss_dssp ---------GHH--HHTSGGGHHHHHHHHHHTTTTCCTTS--EEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTS
T ss_pred ---------ccc--chhhHHHHHHHHHHHHHHHcCCCccc--EEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCC
Confidence 000 00001356789999999999997655 999999999998888776 23 78987 5554 45
Q ss_pred CchhHHHHHHHHHHhc--CCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHH
Q 037063 232 HENEAAALMIESSKKR--GARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVA 308 (588)
Q Consensus 232 ~~s~~~~~~~~~a~~~--G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a 308 (588)
|++ ....+..+++.. |++++.++. +++|+++|+ +++++|++++++|+||...|+++| ++|
T Consensus 129 ~~~-~~~~~~~~~~~~~~g~~~~~v~~--------~~~l~~~i~--------~~~~~v~~~~~~nptG~~~~l~~i~~l~ 191 (416)
T 1qz9_A 129 FPT-DLYIAEGLADMLQQGYTLRLVDS--------PEELPQAID--------QDTAVVMLTHVNYKTGYMHDMQALTALS 191 (416)
T ss_dssp CHH-HHHHHHHHHHHHCSSCEEEEESS--------GGGHHHHCS--------TTEEEEEEESBCTTTCBBCCHHHHHHHH
T ss_pred CCc-hHHHHHHHHHHhcCCceEEEeCc--------HHHHHHHhC--------CCceEEEEeccccCcccccCHHHHHHHH
Confidence 654 332223444444 999988875 578888887 679999999999999999999999 999
Q ss_pred HHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccCCCCCCce-EEEEEeCcchhcccCCCCCCCceEeeecCCCc
Q 037063 309 AEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIFGENPSGF-GCLFVKKSSASVLSGSTSSVSTIMGIEPSFSE 387 (588)
Q Consensus 309 ~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~-G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~ 387 (588)
+++|+++|+|+++..+ ...+++..+.+|++++|+||+++. +.|+ |++++++++++.+.+...|+.|.........+
T Consensus 192 ~~~~~~li~D~a~~~g--~~~~~~~~~~~d~~~~s~~K~l~~-g~~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~ 268 (416)
T 1qz9_A 192 HECGALAIWDLAHSAG--AVPVDLHQAGADYAIGCTYKYLNG-GPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPR 268 (416)
T ss_dssp HHHTCEEEEECTTTTT--TSCCCHHHHTCSEEEECSSSTTCC-CTTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSS
T ss_pred HHcCCEEEEEcccccc--CcCCChhhcCCCEEEecCcccCCC-CCCCeEEEEECHHHHhccCCCccccCccccccCCCCc
Confidence 9999999999999876 223333334589999999997643 5566 99999999888777654331111100000000
Q ss_pred ccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC--eEEEeC
Q 037063 388 IIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIP--LVRIYG 465 (588)
Q Consensus 388 ~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~--~v~i~~ 465 (588)
. .+.. ....+ ..||++..++ +++.++++.+.+.+++++.++.+.+++++.+.|.++ .+ +++++.
T Consensus 269 ~-~~~~-~~~~~-~~~~~~~~~~---~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--------~~~~g~~~~~ 334 (416)
T 1qz9_A 269 Y-EPSN-GIARY-LCGTQPITSL---AMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQR--------CAAHELTLVT 334 (416)
T ss_dssp C-CBCS-SGGGG-CCSCCCHHHH---HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHH--------HTTSCCEECS
T ss_pred c-CCCc-chHHh-cCCCCCHHHH---HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhh--------ccCCCeEEeC
Confidence 0 0000 01134 5678777765 677788888876689999999999999999999874 23 577776
Q ss_pred CCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEe
Q 037063 466 PKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAA 545 (588)
Q Consensus 466 p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvS 545 (588)
+.....+++++.|.+.+ ...+.+.|.++||.++.. +...||+|
T Consensus 335 ~~~~~~~~~~~~~~~~~-------~~~l~~~l~~~gi~~~~~------------------------------~~~~lRis 377 (416)
T 1qz9_A 335 PREHAKRGSHVSFEHPE-------GYAVIQALIDRGVIGDYR------------------------------EPRIMRFG 377 (416)
T ss_dssp CSSGGGBCSEEEEECTT-------HHHHHHHHHTTTEECEEE------------------------------TTTEEEEE
T ss_pred CCCHHHcCCEEEEecCC-------HHHHHHHHHhCCcEeccC------------------------------CCCeEEEe
Confidence 64221246777777653 566777778889986421 11289999
Q ss_pred cC-CCCCHHHHHHHHHHHHHhhhhhhcccccccccccccccc
Q 037063 546 LG-CLTNFEDTYRLWAFVSRFLDADFVEKERWRYMALNQKTI 586 (588)
Q Consensus 546 lg-~~~t~eDv~~li~~l~~~l~~~~~~~~~~~~~~~~~~~~ 586 (588)
++ ++++.+||+++++.|++++++ ..|+.-..||++.
T Consensus 378 ~~~~~~t~~~i~~~~~~l~~~~~~-----~~~~~~~~~~~~~ 414 (416)
T 1qz9_A 378 FTPLYTTFTEVWDAVQILGEILDR-----KTWAQAQFQVRHS 414 (416)
T ss_dssp CCTTTCCHHHHHHHHHHHHHHHHH-----TTTC---------
T ss_pred CcccCCCHHHHHHHHHHHHHHHhc-----cccccccccccCC
Confidence 98 699999999999999988754 5889988898864
No 15
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.2e-32 Score=290.22 Aligned_cols=368 Identities=12% Similarity=0.098 Sum_probs=272.7
Q ss_pred HHHhhhccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCch
Q 037063 98 RIRAQDYFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEE 177 (588)
Q Consensus 98 ~iR~~~f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~ 177 (588)
++|+ +||.+ +..+|||+.+.++.++.+++++.+.+.. + |+...
T Consensus 9 ~~r~-~f~~~--~~~~~l~~~~~~~~~~~v~~a~~~~~~~------~----------------------------~~~~~ 51 (386)
T 2dr1_A 9 AFKE-VYEMV--KPKYKLFTAGPVACFPEVLEIMKVQMFS------H----------------------------RSKEY 51 (386)
T ss_dssp HHHH-HHHHH--SCCSEECCSSSCCCCHHHHHHTTSCCCC------T----------------------------TSHHH
T ss_pred HHHH-HHhhc--CccceeecCCCcCCcHHHHHHHhccccc------c----------------------------cCHHH
Confidence 5775 59888 5689999999999999999987543310 0 11112
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++.+++++.+++++|++ +.+.|++|+|+|+|+.+++.++ +++||+|++ ...|++. .+ ...++..|++++.++.
T Consensus 52 ~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l-~~~gd~vl~~~~~~~~~--~~-~~~~~~~g~~~~~v~~ 126 (386)
T 2dr1_A 52 RKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNG-VSKGGKVLVTIIGAFGK--RY-KEVVESNGRKAVVLEY 126 (386)
T ss_dssp HHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHH-SCTTCEEEEEESSHHHH--HH-HHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHh-hcCCCeEEEEcCCchhH--HH-HHHHHHhCCceEEEec
Confidence 577889999999999997 3345999999999999999998 889999664 4555532 12 4566778999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ +++.+|+++|+++|.+ .+++++|++++++|+||.+.|+++| ++|+++|+++|+|+++..+. ..+++..+
T Consensus 127 ~-~~~~~d~~~l~~~l~~------~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~--~~~~~~~~ 197 (386)
T 2dr1_A 127 E-PGKAVKPEDLDDALRK------NPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGG--ADIKFDKW 197 (386)
T ss_dssp C-TTCCCCHHHHHHHHHH------CTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTT--BCCCTTTT
T ss_pred C-CCCCCCHHHHHHHHhc------CCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccC--cccccccc
Confidence 8 5678999999999951 1578999999999999999999999 99999999999999987762 23344455
Q ss_pred CCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHH
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLV 415 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~a 415 (588)
++|++++|+||++|. |.|+|++++++++++.+.+....+ +..+.. ..+.......+ ..+|++.... ++
T Consensus 198 ~~di~~~s~sK~~~~-~~g~G~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~-~~~~~~~~~~---~a 265 (386)
T 2dr1_A 198 GLDVVFSSSQKAFGV-PPGLAIGAFSERFLEIAEKMPERG-WYFDIP------LYVKYLKEKES-TPSTPPMPQV---FG 265 (386)
T ss_dssp TCSEEEEETTSTTCC-CSSCEEEEECHHHHHHHTTCTTCC-STTCHH------HHHHHHHHHSS-CSSCCCHHHH---HH
T ss_pred CCcEEEEeccccccC-CCceEEEEECHHHHHHHhcCCCCc-eEEeHH------HHHHhhccCCC-CCCCCCHHHH---HH
Confidence 689999999998885 668999999998887775432111 110000 00000000012 4556666554 66
Q ss_pred HHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHH
Q 037063 416 ECKGLDHADAL-GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQ 494 (588)
Q Consensus 416 l~~aL~~l~~~-G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~ 494 (588)
+..+|+.+.+. |++++.++.+.+++++.+.|.++ +++++.+.. ...+.++.|.+.+ + ++...+.
T Consensus 266 ~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~-~~~~~~~~~~~~~--~--~~~~~~~ 330 (386)
T 2dr1_A 266 INVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI----------GLDILAEPG-HESPTITAVLTPP--G--IKGDEVY 330 (386)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT----------TCCBSSCTT-CBCSSEEEEECCT--T--CCHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeeCcCcc-ccCCceEEEEcCC--C--CCHHHHH
Confidence 77889888877 78999999999999999999984 244444422 1246788888753 1 4567777
Q ss_pred HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 495 KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 495 ~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
+.|.++||.++.|..+ .+...||+|++.+++.+|++++++.|++++++.
T Consensus 331 ~~l~~~gi~v~~~~~~--------------------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 379 (386)
T 2dr1_A 331 EAMRKRGFELAKGYGS--------------------------VKEKTFRIGHMGYMKFEDIQEMLDNLREVINEL 379 (386)
T ss_dssp HHHHHTTEECEECCGG--------------------------GTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCeEEecCccc--------------------------cCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 7777779999887421 111289999999999999999999999988753
No 16
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=2.6e-32 Score=287.29 Aligned_cols=367 Identities=16% Similarity=0.146 Sum_probs=260.6
Q ss_pred eeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHh
Q 037063 113 VCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFM 192 (588)
Q Consensus 113 vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~l 192 (588)
+|||+++.++.|+.+++++.+.+.. .+++|++. + . ++....+...++|+.+++++
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~---------------------~-~--~~~~~~~~~~~l~~~la~~~ 57 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYRE-KYGNPNSA---------------------H-G--MGIEANLHMEKAREKVAKVL 57 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHT-CCCCTTCS---------------------S-H--HHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHh-cCCCCccc---------------------c-H--HHHHHHHHHHHHHHHHHHHc
Confidence 8999999999999999998776643 34455210 0 0 11112567789999999999
Q ss_pred CCCCCCceEEEecCHHHHHHHHHHhCC---CCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHH
Q 037063 193 NISEDDYTLVFTANQSSAFKLLAESYP---FYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKL 268 (588)
Q Consensus 193 ga~~~e~~vvft~g~T~al~lv~~s~~---~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l 268 (588)
|+++++ |++|+|+|+|+.+++.++. +++||+|++ ...|++ .... ...++..|++++.++.+ +++.+|+++|
T Consensus 58 g~~~~~--v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~-~~~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~l 132 (384)
T 1eg5_A 58 GVSPSE--IFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKA-VLET-MKYLSMKGFKVKYVPVD-SRGVVKLEEL 132 (384)
T ss_dssp TSCGGG--EEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHH-HHHH-HHHHHHTTCEEEECCBC-TTSCBCHHHH
T ss_pred CCCCCe--EEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchH-HHHH-HHHHHhcCCEEEEEccC-CCCccCHHHH
Confidence 997654 9999999999999999984 278999765 455654 3322 33446679999999997 6788999999
Q ss_pred HHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcC--cEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccC
Q 037063 269 MKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKG--WHVLLDATALGSKDMDTLGLSLFKPDFLICSFY 345 (588)
Q Consensus 269 ~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g--~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~ 345 (588)
+++|+ +++++|++++++|+||..+|+++| ++|+++| +++|+|+++..+. .++++..+.+|++++|+|
T Consensus 133 ~~~i~--------~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~--~~~~~~~~~~di~~~s~s 202 (384)
T 1eg5_A 133 EKLVD--------EDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGK--IPFSLEKLEVDYASFSAH 202 (384)
T ss_dssp HHHCC--------TTEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTT--SCCCCTTTCCSEEEEEGG
T ss_pred HHHhC--------CCCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCC--cccCchhcCCCEEEecHH
Confidence 99997 679999999999999999999999 9999999 9999999987652 233444446899999999
Q ss_pred ccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHH
Q 037063 346 KIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADA 425 (588)
Q Consensus 346 K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~ 425 (588)
|++| |.|+|++++++++ .+.+...++ +. . ..+ ..++.+.... +++..+|+.+.+
T Consensus 203 K~~g--~~G~G~~~~~~~~--~~~~~~~~~-~~--------------~---~~~-~~~~~~~~~~---~a~~~al~~~~~ 256 (384)
T 1eg5_A 203 KFHG--PKGVGITYIRKGV--PIRPLIHGG-GQ--------------E---RGL-RSGTQNVPGI---VGAARAMEIAVE 256 (384)
T ss_dssp GGTS--CTTCEEEEECTTS--CCCCSBCSS-CT--------------T---TTT-BCSCCCHHHH---HHHHHHHHHHHH
T ss_pred HhcC--CCceEEEEEcCCC--ccccccccC-cc--------------c---ccc-cCCCCChHHH---HHHHHHHHHHHH
Confidence 9988 7789999999875 233333221 10 0 012 3456665554 566678887654
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEec
Q 037063 426 LGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLS 505 (588)
Q Consensus 426 ~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~ 505 (588)
+++++.++.+++++++.+.|.+. +++++.+.. ...+.++.|.+.+ ++...+.+.|.++||.++
T Consensus 257 -~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~ 319 (384)
T 1eg5_A 257 -ELSEAAKHMEKLRSKLVSGLMNL----------GAHIITPLE-ISLPNTLSVSFPN-----IRGSTLQNLLSGYGIYVS 319 (384)
T ss_dssp -THHHHHHHHHHHHHHHHHHHHTT----------TCEECSCTT-SBCTTEEEEECTT-----CCHHHHHHHHHHTTEECB
T ss_pred -hHHHHHHHHHHHHHHHHHHhCCC----------CeEEeCCcc-cCCCCEEEEEeCC-----CCHHHHHHHHhhCCeEEe
Confidence 57899999999999999999873 456666532 1134677887754 457778888889999999
Q ss_pred cccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 506 CGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 506 ~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
.|..|.+...... ..+... +. ....+.+.||+|++.+++.||++++++.|++++++.
T Consensus 320 ~g~~~~~~~~~~~-----~~~~~~-g~-~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 376 (384)
T 1eg5_A 320 TSSACTSKDERLR-----HVLDAM-GV-DRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL 376 (384)
T ss_dssp C-----------------CHHHHT-TC-CHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ccccccCCCCcch-----HHHHHc-CC-ChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9876643210000 000100 00 000012389999999999999999999999988753
No 17
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=3.9e-34 Score=303.55 Aligned_cols=368 Identities=14% Similarity=0.065 Sum_probs=253.0
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
++.+|||+++.++.|+.+++++.+.+.. .++||++ ...++....+.++++|++++
T Consensus 19 ~~~iyld~~~~~~~~~~v~~a~~~~~~~-~~~~~~~------------------------~~~~~~~~~~~~~~l~~~la 73 (400)
T 3vax_A 19 SHMTYLDAAATTRVDQRVADIVLHWMTA-EFGNAGS------------------------RHEYGIRAKRGVERAREYLA 73 (400)
T ss_dssp ---CCCCCCCCSSSCHHHHHHHHHHHHH-HHSCSSC------------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHHh-ccCCCcc------------------------cchhHHHHHHHHHHHHHHHH
Confidence 7899999999999999999998766532 3455521 00111122577889999999
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCCC----CCCC-eEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCcc
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYPF----YSNP-RLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRI 263 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~~----~~gd-~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i 263 (588)
+++|+++++ |++|+|+|+|+.+++.++ . ++|| +|+ ...+|++ .... ...++..|++++.++++ +++.+
T Consensus 74 ~~~~~~~~~--v~~~~g~t~al~~~~~~l-~~~~~~~gd~~Vl~~~~~~~~-~~~~-~~~~~~~g~~~~~v~~~-~~~~~ 147 (400)
T 3vax_A 74 STVSAEPDE--LIFTSGATESNNIALLGL-APYGERTGRRHIITSAIEHKA-VLEP-LEHLAGRGFEVDFLTPG-PSGRI 147 (400)
T ss_dssp HHTTCCGGG--EEEESCHHHHHHHHHHTT-HHHHHHHTCCEEEEETTSCHH-HHHH-HHHHHTTTCEEEEECCC-TTCCC
T ss_pred HHcCCCCCc--EEEeCCHHHHHHHHHHHH-HHhhccCCCCEEEECccccHh-HHHH-HHHHHhcCCeEEEEccC-CCCCc
Confidence 999997654 999999999999999998 5 7899 866 5566776 3332 23345689999999998 67889
Q ss_pred CHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEe
Q 037063 264 HSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLIC 342 (588)
Q Consensus 264 ~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~ 342 (588)
|+++|+++|+ +++++|++++++|+||.+.|+++| ++|+++|+++|+|+++..+ ...+++... +|++++
T Consensus 148 d~~~l~~~i~--------~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~--~~~~~~~~~-~d~~~~ 216 (400)
T 3vax_A 148 SVEGVMERLR--------PDTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYG--KVPGDLTTP-IDMISI 216 (400)
T ss_dssp CHHHHHTTCC--------TTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTT--TSGGGGGSC-CSEEEE
T ss_pred CHHHHHHhcC--------CCceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcC--CCCcChhhc-CcEEEE
Confidence 9999999887 689999999999999999999999 9999999999999999877 334455555 899999
Q ss_pred ccCccCCCCCCceEEEE-EeCcch----hcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHH
Q 037063 343 SFYKIFGENPSGFGCLF-VKKSSA----SVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVEC 417 (588)
Q Consensus 343 S~~K~~G~~P~G~G~L~-v~~~~~----~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~ 417 (588)
|+||++| |.|+|+++ ++++.+ ..+.+...++ +. ...+ ..||++..+. +++.
T Consensus 217 s~~K~~g--~~g~g~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------------~~~~-~~~~~~~~~~---~a~~ 272 (400)
T 3vax_A 217 SGHKIGA--PKGVGALVTRRREEMDDERVPLEPIMFGG-GQ-----------------ERKL-RPGTLPVPLI---MGLA 272 (400)
T ss_dssp ETGGGTS--CSSCEEEEECBCSSSTTCBCCCCCSSCSS-CT-----------------GGGT-SCSCCCHHHH---HHHH
T ss_pred eHHHhCC--CCceEEEEEecchhccccccccCceecCC-Cc-----------------eeee-ecCCCCHHHH---HHHH
Confidence 9999888 78999999 988432 2344444331 10 0023 5677777664 6677
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHH
Q 037063 418 KGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLA 497 (588)
Q Consensus 418 ~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l 497 (588)
.+++.+.+ +++++.++.+++++++.+.|. + ++++++.+.. ...+.++.|.+.+ .+...+.+.|
T Consensus 273 ~al~~~~~-~~~~~~~~~~~~~~~l~~~L~-~---------~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~l~~~L 335 (400)
T 3vax_A 273 EAAKIFEA-EHAQWQVAAQDLRSRLLAGLA-S---------TSFQVNGDQD-HVVPHILNLSFED-----VDAEAFLVTL 335 (400)
T ss_dssp HHHHHHHH-SHHHHHHHHHHHHHHHHHHHT-T---------TTCEECSCTT-SBCTTEEEEECTT-----CCHHHHHHHH
T ss_pred HHHHHHHh-hHHHHHHHHHHHHHHHHHhhC-C---------CCEEEeCCcc-cCCCCEEEEEeCC-----CCHHHHHHHH
Confidence 88887766 689999999999999999998 4 4677777643 1234688888765 4577888888
Q ss_pred HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec-CCCCCHHHHHHHHHHHHHhhhh
Q 037063 498 DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL-GCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 498 ~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl-g~~~t~eDv~~li~~l~~~l~~ 568 (588)
. +||.++.|..|.+....... .+... +. ......+.||+|+ +.+++.||++++++.|++++++
T Consensus 336 ~-~gi~v~~g~~~~~~~~~~~~-----~~~~~-g~-~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 336 K-DLVAVATGSASTSASFTPSH-----VLRAM-GL-PEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp H-HHHHHTTTTEEEEEEECCHH-----HHHTT-TC-CHHHHTSEEEEEEEEC--------------------
T ss_pred h-cCcEEEecccccCCCCCccH-----HHHHc-CC-CccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 8 99999999888653221110 00000 00 0000013999999 9999999999999999987753
No 18
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=5.9e-32 Score=286.08 Aligned_cols=370 Identities=12% Similarity=0.066 Sum_probs=269.5
Q ss_pred HHHhhhccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCch
Q 037063 98 RIRAQDYFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEE 177 (588)
Q Consensus 98 ~iR~~~f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~ 177 (588)
..|+ .||.|. .+.+|+|+.|..+.|+.+++++.+.+... +....
T Consensus 7 ~~~~-~~~~~~-~~~~~~~~~g~~~~~~~v~~a~~~~~~~~----------------------------------~~~~~ 50 (393)
T 2huf_A 7 PPAV-LREPLV-TPNKLLMGPGPSNAPQRVLDAMSRPILGH----------------------------------LHPET 50 (393)
T ss_dssp CCGG-GGSCCC-CCCCEECSSSCCCCCHHHHHHTTSCCCCT----------------------------------TSHHH
T ss_pred chhh-hhcccC-CCCeEEecCCCCCCCHHHHHHHHhhhccC----------------------------------CCHHH
Confidence 3444 588886 78899999999999999999875433110 00012
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.+..+++|+.+++++|++++ +.|++|+|+|+|+.+++.++ +++||+|+ ....|++ ..+ ...++..|++++.+++
T Consensus 51 ~~~~~~l~~~la~~~g~~~~-~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~--~~~-~~~~~~~g~~~~~v~~ 125 (393)
T 2huf_A 51 LKIMDDIKEGVRYLFQTNNI-ATFCLSASGHGGMEATLCNL-LEDGDVILIGHTGHWG--DRS-ADMATRYGADVRVVKS 125 (393)
T ss_dssp HHHHHHHHHHHHHHHTCCCS-EEEEESSCHHHHHHHHHHHH-CCTTCEEEEEESSHHH--HHH-HHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCC-cEEEEcCcHHHHHHHHHHHH-hCCCCEEEEECCCcch--HHH-HHHHHHcCCeeEEEeC
Confidence 56788999999999999754 35999999999999999998 89999966 4556765 233 4556778999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCC-cceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKK-KRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSL 334 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~-~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~ 334 (588)
+ +++.+|+++|+++|+ + ++++|++++++|+||..+|+++| ++|+++|+++|+|+++..+. ..+++..
T Consensus 126 ~-~~~~~d~~~l~~~i~--------~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~--~~~~~~~ 194 (393)
T 2huf_A 126 K-VGQSLSLDEIRDALL--------IHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGG--APMFMDR 194 (393)
T ss_dssp C-TTCCCCHHHHHHHHH--------HHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTT--BCCCTTT
T ss_pred C-CCCCCCHHHHHHHHh--------ccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCC--CCcchhh
Confidence 7 567899999999998 4 78999999999999999999999 99999999999999988762 3344555
Q ss_pred CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCC-CceEeeecCCCcccccccccccccccCCCCCccchhhH
Q 037063 335 FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSV-STIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSK 413 (588)
Q Consensus 335 ~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~-~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~ 413 (588)
+++|++++|+||+++. |.|+|++++++++++.+....... ........ ....+......++ +.||++..++
T Consensus 195 ~~~d~~~~s~sK~l~g-~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~--- 266 (393)
T 2huf_A 195 WEIDAMYTGSQKVLGA-PPGITPVSFSHRAVERYKRRNTKVKVYYWDMSL---VGDYWGCFGRPRI-YHHTISSTLL--- 266 (393)
T ss_dssp TTCSEEECCSSSTTCC-CSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHH---HHHHTTCSSSCCC-CSCCCCHHHH---
T ss_pred cCccEEEECCCccccc-CCCeEEEEECHHHHHHHhhcCCCCceEEEchHH---HHhhhccccccCC-CCCCCCHHHH---
Confidence 5699999999996432 789999999998887765431000 00000000 0000000000134 5678887775
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc-cEEEEEeecCCCCCcCHHH
Q 037063 414 LVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG-PSLAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 414 ~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg-~iv~f~~~~~~g~~i~~~~ 492 (588)
+++..+++.+.+.|++.+.++.+.+++++.+.|.++ +++++.+.. .++ .++.|.+.. | ++...
T Consensus 267 ~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~--~~~~~~~~~~~~~--~--~~~~~ 330 (393)
T 2huf_A 267 YGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDA----------GFELYADPK--DRLSTVTTIKVPQ--G--VDWLK 330 (393)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----------TCCBSSCGG--GBCTTEEEEECCT--T--CCHHH
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc----------CCeeccCcc--ccCCcEEEEEcCC--C--CCHHH
Confidence 667778988877788999999999999999999985 244554421 133 477787752 1 45666
Q ss_pred HHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec-CCCCCHHHHHHHHHHHHHhhhhh
Q 037063 493 VQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL-GCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 493 v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl-g~~~t~eDv~~li~~l~~~l~~~ 569 (588)
+.+.| +++||.++.|..| .+...||+|+ ++.++.||++++++.|++++++.
T Consensus 331 ~~~~L~~~~gi~v~~g~~~--------------------------~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~ 383 (393)
T 2huf_A 331 AAQYAMKTYLVEISGGLGP--------------------------TAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAV 383 (393)
T ss_dssp HHHHHHHHHCEECBCCCGG--------------------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEecCccc--------------------------ccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHc
Confidence 76655 4569999987543 1112899999 54568999999999999988653
No 19
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=1.6e-31 Score=281.26 Aligned_cols=353 Identities=13% Similarity=0.080 Sum_probs=264.1
Q ss_pred eecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHhC
Q 037063 114 CFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFMN 193 (588)
Q Consensus 114 yLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~lg 193 (588)
++.+.+..++++.+++++.+.+.. .. +....+.++++|+++++++|
T Consensus 4 ~~~~~gp~~~~~~v~~a~~~~~~~----~~------------------------------~~~~~~~~~~~~~~la~~~~ 49 (384)
T 3zrp_A 4 LLLHVGPTTIKEDVLVAGLENNVG----FT------------------------------SKEFVEALAYSLKGLRYVMG 49 (384)
T ss_dssp --CCSSCSCCCHHHHHHTTCCSCC----TT------------------------------SHHHHHHHHHHHHHHHHHHT
T ss_pred eeccCCCCCCCHHHHHHhhccccc----cc------------------------------cHHHHHHHHHHHHHHHHHhC
Confidence 456677888899999987543311 00 00125778899999999999
Q ss_pred CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHH
Q 037063 194 ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKI 272 (588)
Q Consensus 194 a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i 272 (588)
++++.+.|+||+|+|+|+. ++.++ +++||+|+ ....|++. .+ ...++..|++++.++++ .++.+|+++|+++|
T Consensus 50 ~~~~~~~v~~~~g~t~al~-~~~~~-~~~gd~vi~~~~~~~~~--~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i 123 (384)
T 3zrp_A 50 ASKNYQPLIIPGGGTSAME-SVTSL-LKPNDKILVVSNGVFGD--RW-EQIFKRYPVNVKVLRPS-PGDYVKPGEVEEEV 123 (384)
T ss_dssp CCTTSEEEEEESCHHHHHH-HGGGG-CCTTCEEEEECSSHHHH--HH-HHHHTTSSCEEEEECCS-TTCCCCHHHHHHHH
T ss_pred CCCCCcEEEEcCCcHHHHH-HHHhh-cCCCCEEEEecCCcchH--HH-HHHHHHcCCcEEEecCC-CCCCCCHHHHHHHH
Confidence 9863346999999999999 88888 89999966 45666542 23 45667889999999998 57789999999999
Q ss_pred hhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccCCCC
Q 037063 273 VGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIFGEN 351 (588)
Q Consensus 273 ~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~G~~ 351 (588)
++ .++++|++++++|+||.+.|+++| ++|+++|+++|+|+++..+ ...+++..+++|++++|+||+++.
T Consensus 124 ~~-------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~--~~~~~~~~~~~d~~~~s~~K~~~~- 193 (384)
T 3zrp_A 124 RK-------SEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVG--AEEVKAEEWNVDVYLTASQKALGS- 193 (384)
T ss_dssp HH-------SCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTT--TSCCCTTTTTCSEEEEETTSTTCC-
T ss_pred Hh-------CCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECccccc--CccccccccCCCEEEecCcccccC-
Confidence 82 379999999999999999999999 9999999999999998876 334455555699999999997653
Q ss_pred CCceEEEEEeCcchhcc-cCCCCCCCceEeeecCCCcccccccccccccc-----cCCCCCccchhhHHHHHHHHHHHHH
Q 037063 352 PSGFGCLFVKKSSASVL-SGSTSSVSTIMGIEPSFSEIIELETLDESSQS-----KFPESSISGVSSKLVECKGLDHADA 425 (588)
Q Consensus 352 P~G~G~L~v~~~~~~~l-~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~-----e~GT~~~~~~~~~~al~~aL~~l~~ 425 (588)
|.|+|+++++++.++.+ ++....+ ... +...+.... ..|+ ..||++.... +++..+++++..
T Consensus 194 ~~g~g~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~-~~~~~~~~~~~g~~~~~~~---~a~~~al~~~~~ 261 (384)
T 3zrp_A 194 AAGLGLLLLSPKALSILDSQNSIAG-YYL-------DLRNWLPVM-RGAEEGKAAYFATPPVHVI---LQLAEAFRLIEK 261 (384)
T ss_dssp CSSEEEEEECHHHHHHHHHCCCSCC-STT-------CHHHHHHHH-HHHHTTCCCCSSCCCHHHH---HHHHHHHHHHHH
T ss_pred CCceEEEEECHHHHHHhcCCCCCCc-ccc-------cHHHHHHHH-HhhcccCCCcCCCCCHHHH---HHHHHHHHHHHh
Confidence 78999999999988877 4422110 000 000000000 0120 2257776664 677789999888
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEec
Q 037063 426 LGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLS 505 (588)
Q Consensus 426 ~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~ 505 (588)
.|++++.++.+.+++++.+.|.++ +++++.+......+.++.|.+.+ .+...+.+.|.++||.++
T Consensus 262 ~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~v~ 326 (384)
T 3zrp_A 262 EGIENRIKRHTMVASAIRAGLEAL----------GLEIVARRPESYSNTVTGVILKV-----ADPQKVLAGTVNEGVEFA 326 (384)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHT----------TCCBSCSSGGGBCSSEEEEECSS-----SCHHHHHHHHHTTTCCCE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHC----------CCeEccCcccccCccEEEEECCC-----CCHHHHHHHHHHCCEEEe
Confidence 889999999999999999999984 34455543112235677788765 457788888888899999
Q ss_pred cccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhhh
Q 037063 506 CGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDADF 570 (588)
Q Consensus 506 ~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~~ 570 (588)
.|.+|. . ..||++++.+++.|||+++++.|++++++.-
T Consensus 327 ~g~~~~-------------------------~--~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 327 PGVHPA-------------------------F--KYFRIGHMGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp ECCCTT-------------------------C--CEEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCC-------------------------c--CEEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence 886542 1 3899999999999999999999999987643
No 20
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=3.8e-32 Score=283.63 Aligned_cols=356 Identities=9% Similarity=0.080 Sum_probs=265.2
Q ss_pred eeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHH
Q 037063 112 YVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDF 191 (588)
Q Consensus 112 ~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~ 191 (588)
..|+++.|...+|+.+++++.+.+.....+..+ .. ....+.++++|++++++
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~~~~~~----------------------~~------~~~~~~~~~~~~~la~~ 55 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDEKIGVISH----------------------RS------KKFEEVYKTASDNLKTL 55 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHTTTTTSCT----------------------TS------HHHHHHHHHHHHHHHHH
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcCCccCcCC----------------------CC------HHHHHHHHHHHHHHHHH
Confidence 457888899999999997776555322211110 00 01147789999999999
Q ss_pred hCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHH
Q 037063 192 MNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKK 271 (588)
Q Consensus 192 lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~ 271 (588)
+|++ +.+.|++|+|+|+|+.+++.++ .++ +.+++..++++ ..+ ...++..|++++.++.+ .++.+|+++|+
T Consensus 56 ~g~~-~~~~v~~~~g~t~al~~~~~~l-~~~-~~i~~~~~~~~--~~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~l~-- 126 (362)
T 3ffr_A 56 LELP-SNYEVLFLASATEIWERIIQNC-VEK-KSFHCVNGSFS--KRF-YEFAGELGREAYKEEAA-FGKGFYPADIT-- 126 (362)
T ss_dssp TTCC-TTEEEEEESCHHHHHHHHHHHH-CSS-EEEEEECSHHH--HHH-HHHHHHTTCEEEEEECC-TTCCCCGGGCC--
T ss_pred hCCC-CCcEEEEeCCchHHHHHHHHhc-cCC-cEEEEcCcHHH--HHH-HHHHHHhCCCeEEEecC-CCCCCCHHHHh--
Confidence 9995 3346999999999999999998 566 44666767664 333 45667889999999987 66789999988
Q ss_pred HhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc-CcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccCC
Q 037063 272 IVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK-GWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIFG 349 (588)
Q Consensus 272 i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~-g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~G 349 (588)
++ +++++|++++++|+||.++|+++| ++|+++ |+++|+|+++..+ ..++++.. +|++++|+||++|
T Consensus 127 ~~--------~~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~--~~~~~~~~--~d~~~~s~~K~~~ 194 (362)
T 3ffr_A 127 VP--------ADAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLP--YPKFDWTK--IDSVFFSVQKCFG 194 (362)
T ss_dssp CC--------TTCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTT--SSCCCTTS--CSEEEEETTSTTC
T ss_pred cc--------CCccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccC--CcccChhH--CcEEEEecccccC
Confidence 55 789999999999999999999999 999999 9999999998876 33444444 8999999999888
Q ss_pred CCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHH
Q 037063 350 ENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLI 429 (588)
Q Consensus 350 ~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~ 429 (588)
. |.|+|++++++++++.+.+...|+ +...... +...+.... .++...+|++..+. +++..+++.+...|++
T Consensus 195 ~-~~G~g~~~~~~~~~~~~~~~~~gg-~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~al~~~~~~~~~ 265 (362)
T 3ffr_A 195 L-PAGLGVWILNDRVIEKSKALLAKR-KSIGTYH---TIPSMLEKA-RVNQTPETPNAMNI---FLLGKVTGDMLQISAD 265 (362)
T ss_dssp C-CSCCEEEEEEHHHHHHHHHHHHTT-CCCCSTT---SHHHHHHHH-TTTCCSSCCCHHHH---HHHHHHHHHHHHHCHH
T ss_pred C-CCceEEEEECHHHHHHhhhccccC-CCCcccc---cHHHHHHHh-hcCCCCCCchHHHH---HHHHHHHHHHHHccHH
Confidence 4 789999999999887776544332 2211100 000000000 01213667777664 6777889988887899
Q ss_pred HHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccc
Q 037063 430 LISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFL 509 (588)
Q Consensus 430 ~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~ 509 (588)
++.++.+.+++++.+.|.++ |+++++.+......+.++.|.+.+ +...+.+.|.++||.++.|..
T Consensus 266 ~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~gi~~~~g~~ 330 (362)
T 3ffr_A 266 GIRKQTEEKAALINTYIESS---------KVFSFGVEDAKLRSMTTIVANTTM------LPGEINKILEPFDMAVGAGYG 330 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHHC---------SSEEESSSCGGGBCSSEEEEEESS------CHHHHHHHHGGGTEEEEECSG
T ss_pred HHHHHHHHHHHHHHHHHHHc---------cCceeccCChhhcCCceEEEecCC------CHHHHHHHHHHCCeEEecCcc
Confidence 99999999999999999984 688888754322345788888764 367777777777999998854
Q ss_pred cCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 510 QNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 510 c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
| .+...||+|++.+++.|||++++++|++++
T Consensus 331 ~--------------------------~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 331 S--------------------------KKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp G--------------------------GTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred c--------------------------cCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 4 112389999999999999999999999875
No 21
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=6.8e-32 Score=285.82 Aligned_cols=367 Identities=14% Similarity=0.061 Sum_probs=269.5
Q ss_pred hhHHHHHhhhccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCccccccccccccccccc
Q 037063 94 DQADRIRAQDYFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQY 173 (588)
Q Consensus 94 ~~~~~iR~~~f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 173 (588)
..++++|. +||.+. ...+|||+++.++.++.+++++.+.+.. + |
T Consensus 18 ~~~~~~r~-~~~~~~-~~~~~l~~~~~~~~~~~v~~a~~~~~~~------~----------------------------~ 61 (393)
T 1vjo_A 18 SINDNQRL-QLEPLE-VPSRLLLGPGPSNAHPSVLQAMNVSPVG------H----------------------------L 61 (393)
T ss_dssp CCCCTTCC-CCCSCC-CCCCEECSSSCCCCCHHHHHHHSSCCCC------T----------------------------T
T ss_pred eecchhhh-cCCccC-CccceeccCCCCCCCHHHHHHHhccccc------c----------------------------c
Confidence 35567886 698775 5678999999999999999997543311 0 1
Q ss_pred CCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEE
Q 037063 174 GSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVS 252 (588)
Q Consensus 174 g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~ 252 (588)
+....++.+++++.+++++|++++ +.|+||+|+|+|+.+++.++ +++||+|++ ...|+++ .+ ...++..|++++
T Consensus 62 ~~~~~~~~~~~~~~la~~~g~~~~-~~v~~t~g~t~al~~~~~~~-~~~gd~Vl~~~~~~~~~--~~-~~~~~~~g~~~~ 136 (393)
T 1vjo_A 62 DPAFLALMDEIQSLLRYVWQTENP-LTIAVSGTGTAAMEATIANA-VEPGDVVLIGVAGYFGN--RL-VDMAGRYGADVR 136 (393)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCCS-CEEEESSCHHHHHHHHHHHH-CCTTCEEEEEESSHHHH--HH-HHHHHHTTCEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCC-cEEEEeCchHHHHHHHHHhc-cCCCCEEEEEcCChhHH--HH-HHHHHHcCCceE
Confidence 111257788999999999999754 25999999999999999999 899999664 4455532 12 456677899999
Q ss_pred EEeccCCCCccCHHHHHHHHhhhccccCCC-cceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCC
Q 037063 253 SAEFAWPNLRIHSGKLMKKIVGKRKKKKKK-KRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTL 330 (588)
Q Consensus 253 ~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~-~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l 330 (588)
.++.+ +++.+|+++|+++++ + ++++|++++++|+||.+.|+++| ++|+++|+++|+|+++..+ ..++
T Consensus 137 ~v~~~-~~~~~d~~~l~~~l~--------~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g--~~~~ 205 (393)
T 1vjo_A 137 TISKP-WGEVFSLEELRTALE--------THRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLG--GVPI 205 (393)
T ss_dssp EEECC-TTCCCCHHHHHHHHH--------HHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTT--TSCC
T ss_pred EEecC-CCCCCCHHHHHHHHh--------hCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCcccc--CcCC
Confidence 99998 567899999999998 4 78999999999999999999999 9999999999999998866 2344
Q ss_pred CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCC---CCCC-CceEeeecCCCcccccccccccccccCCCCC
Q 037063 331 GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGS---TSSV-STIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 331 ~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~---~~g~-~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
++...++|+++.|+||+++. |.|+|++++++++++.+... ..+. .+.. .. ..+ ... ..+ ..|+++
T Consensus 206 ~~~~~~~di~~~s~sK~l~~-~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~-~~~-~~~-~~g~~~ 274 (393)
T 1vjo_A 206 FLDAWGVDLAYSCSQKGLGC-SPGASPFTMSSRAIEKLQRRRTKVANWYLDMN-LL------GKY-WGS-ERV-YHHTAP 274 (393)
T ss_dssp CTTTTTCSEEECCSSSTTCS-CSSCEEEEECHHHHHHHHTCSSCCSCSTTCHH-HH------HHH-HST-TCC-CCSCCC
T ss_pred cccccCccEEEEcCcccccC-CCceEEEEECHHHHHHHhccCCCCCceecCcH-hh------hhh-hcc-CCC-CCCCCC
Confidence 55556699999999997775 66999999999887766321 1100 0000 00 000 000 022 344666
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGT 486 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~ 486 (588)
.... +++..+|+.+.+.+++++.++.+.+++++.+.|.++ +++++.|.. ...+.++.|.+++ +
T Consensus 275 ~~~~---~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~-~~~~~~~~~~~~~--~- 337 (393)
T 1vjo_A 275 INLY---YALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI----------GLSLHVEKE-YRLPTLTTVCIPD--G- 337 (393)
T ss_dssp HHHH---HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----------TCCBSSCGG-GBCSSEEEEECCT--T-
T ss_pred HHHH---HHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc----------CCcccCCcc-ccCCcEEEEEcCC--C-
Confidence 6654 667788888776688999999999999999999985 244555422 1124677777742 1
Q ss_pred CcCHHHHHHHHHhC-CcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec-CCCCCHHHHHHHHHHHHH
Q 037063 487 RIDPALVQKLADRH-NISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL-GCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 487 ~i~~~~v~~~l~~~-gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl-g~~~t~eDv~~li~~l~~ 564 (588)
.+...+.+.|.++ ||.++.|..|. +.+.+|+|+ ++.++.||++++++.|++
T Consensus 338 -~~~~~~~~~l~~~~gi~v~~g~~~~--------------------------~~~~iRis~~~~~~~~~~i~~~~~~l~~ 390 (393)
T 1vjo_A 338 -VDGKAVARRLLNEHNIEVGGGLGEL--------------------------AGKVWRVGLMGFNSRKESVDQLIPALEQ 390 (393)
T ss_dssp -CCHHHHHHHHHHHHCEECEECCGGG--------------------------TTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHhhCCEEEecCcccc--------------------------CCCEEEEeCCccCChHHHHHHHHHHHHH
Confidence 4566776666655 99999885431 122899995 666788899999999998
Q ss_pred hhh
Q 037063 565 FLD 567 (588)
Q Consensus 565 ~l~ 567 (588)
+++
T Consensus 391 ~l~ 393 (393)
T 1vjo_A 391 VLR 393 (393)
T ss_dssp HHC
T ss_pred HhC
Confidence 764
No 22
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=4e-31 Score=280.03 Aligned_cols=366 Identities=13% Similarity=0.071 Sum_probs=264.0
Q ss_pred hccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 103 DYFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 103 ~f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
.||.|. .+.+|+++.+...+++.+++++.+.+... +........+
T Consensus 10 ~~~~~~-~~~~~~~~~~p~~~~~~v~~a~~~~~~~~----------------------------------~~~~~~~~~~ 54 (396)
T 2ch1_A 10 LRNPLI-IPEKIMMGPGPSNCSKRVLTAMTNTVLSN----------------------------------FHAELFRTMD 54 (396)
T ss_dssp GSSCCC-CCCCBCCSSSSCCCCHHHHHHTTSCCCCT----------------------------------TCHHHHHHHH
T ss_pred cCCCCC-CCcceeecCCCCCCCHHHHHHhccccccC----------------------------------CChhHHHHHH
Confidence 488875 67789999998899999999874332100 0001135678
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCC
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNL 261 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~ 261 (588)
++|+.+++++|++++ +.|++|+|+|+|+.+++.++ +++||+|+ ....|++ +.+ ...++..|++++.++.+ .++
T Consensus 55 ~l~~~la~~~~~~~~-~~v~~~~g~t~al~~~~~~~-~~~gd~vl~~~~~~~~--~~~-~~~~~~~g~~~~~v~~~-~~~ 128 (396)
T 2ch1_A 55 EVKDGLRYIFQTENR-ATMCVSGSAHAGMEAMLSNL-LEEGDRVLIAVNGIWA--ERA-VEMSERYGADVRTIEGP-PDR 128 (396)
T ss_dssp HHHHHHHHHHTCCCS-CEEEESSCHHHHHHHHHHHH-CCTTCEEEEEESSHHH--HHH-HHHHHHTTCEEEEEECC-TTS
T ss_pred HHHHHHHHHhCCCCC-cEEEECCcHHHHHHHHHHHh-cCCCCeEEEEcCCccc--HHH-HHHHHHcCCceEEecCC-CCC
Confidence 999999999999765 25999999999999999999 89999966 4555654 333 34667889999999997 577
Q ss_pred ccCHHHHHHHHhhhccccCCC-cceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcE
Q 037063 262 RIHSGKLMKKIVGKRKKKKKK-KRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDF 339 (588)
Q Consensus 262 ~i~~e~l~~~i~~~~~~~~~~-~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~ 339 (588)
.+|+++|+++++ + ++++|++++++|+||..+|+++| ++|+++|++||+|+++..+ ..++++..+++|+
T Consensus 129 ~~d~~~l~~~l~--------~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g--~~~~~~~~~~~d~ 198 (396)
T 2ch1_A 129 PFSLETLARAIE--------LHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLC--GVPFYMDKWEIDA 198 (396)
T ss_dssp CCCHHHHHHHHH--------HHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBT--TBCCCTTTTTCCE
T ss_pred CCCHHHHHHHHH--------hCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEcccccc--CCccchhhcCcCE
Confidence 899999999998 4 68999999999999999999999 9999999999999998876 2344555566899
Q ss_pred EEeccCccCCCCCCceEEEEEeCcchhcccCCC--CCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHH
Q 037063 340 LICSFYKIFGENPSGFGCLFVKKSSASVLSGST--SSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVEC 417 (588)
Q Consensus 340 vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~--~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~ 417 (588)
++.|+||+++. |.|+|+++++++.++.+.... .+. ...+... . ...+......++ ..||++.... +++.
T Consensus 199 ~~~s~~K~~~~-~~g~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~-~~~~~~~~~~~~-~~~~~~~~~~---~a~~ 269 (396)
T 2ch1_A 199 VYTGAQKVLGA-PPGITPISISPKALDVIRNRRTKSKV-FYWDLLL--L-GNYWGCYDEPKR-YHHTVASNLI---FALR 269 (396)
T ss_dssp EECCCC-CCCC-CSSCEEEEECHHHHHHHHTCSSCCSC-GGGCHHH--H-HHHTTCSSSCCC-CCCCCCHHHH---HHHH
T ss_pred EEEcCCccccC-CCCeEEEEECHHHHHhhhhccCcccc-eEechHH--H-HHhhhhhcccCC-CCCCCcHHHH---HHHH
Confidence 99999996553 789999999998877664321 010 0000000 0 000000000123 4567776654 5667
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHH
Q 037063 418 KGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLA 497 (588)
Q Consensus 418 ~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l 497 (588)
.+|+.+.+.+++++.++.+++++++.+.|.++ +++++.+......+.++.|.++. | ++...+.+.|
T Consensus 270 ~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~L 335 (396)
T 2ch1_A 270 EALAQIAEEGLENQIKRRIECAQILYEGLGKM----------GLDIFVKDPRHRLPTVTGIMIPK--G--VDWWKVSQYA 335 (396)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH----------TCCBSSCSGGGBCTTEEEEECCT--T--CCHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC----------CCeeccCCccccCCceEEEEcCC--C--CCHHHHHHHH
Confidence 88888766688999999999999999999985 24455543211223477887752 1 4566776655
Q ss_pred H-hCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec-CCCCCHHHHHHHHHHHHHhhhh
Q 037063 498 D-RHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL-GCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 498 ~-~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl-g~~~t~eDv~~li~~l~~~l~~ 568 (588)
. ++||.++.|..| .+...||+|+ ++.++.||++++++.|++++++
T Consensus 336 ~~~~gi~v~~g~~~--------------------------~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~ 382 (396)
T 2ch1_A 336 MNNFSLEVQGGLGP--------------------------TFGKAWRVGIMGECSTVQKIQFYLYGFKESLKA 382 (396)
T ss_dssp HHHHCBCCBCCCGG--------------------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred HHhCCEEEecCccc--------------------------cCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHH
Confidence 4 569999887533 1112899999 5677999999999999998875
No 23
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=6.6e-31 Score=273.03 Aligned_cols=345 Identities=13% Similarity=0.121 Sum_probs=256.0
Q ss_pred eecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHhC
Q 037063 114 CFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFMN 193 (588)
Q Consensus 114 yLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~lg 193 (588)
+|.++|.++.|+.+++++.+.+.. + ++....+.++++|+.+++++|
T Consensus 2 ~~~~~gp~~~~~~v~~a~~~~~~~------~----------------------------~~~~~~~~~~~l~~~la~~~g 47 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLRPMRG------H----------------------------LDPEVLRVNRAIQERLAALFD 47 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGSCCCC------T----------------------------TCHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCCCCCCHHHHHHHhccccc------c----------------------------cCHHHHHHHHHHHHHHHHHhC
Confidence 466788889999999987544321 0 000124668899999999999
Q ss_pred CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHH
Q 037063 194 ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKI 272 (588)
Q Consensus 194 a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i 272 (588)
++.+.+.|+||+|+|+|+.+++.++ .+ |+|+ ...+|++. .+ ...++..|++++.++++ +++.+|+++|++++
T Consensus 48 ~~~~~~~v~~t~g~t~a~~~~~~~~-~~--d~vl~~~~~~~~~--~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~l 120 (353)
T 2yrr_A 48 PGEGALVAALAGSGSLGMEAGLANL-DR--GPVLVLVNGAFSQ--RV-AEMAALHGLDPEVLDFP-PGEPVDPEAVARAL 120 (353)
T ss_dssp CCTTCEEEEESSCHHHHHHHHHHTC-SC--CCEEEEECSHHHH--HH-HHHHHHTTCCEEEEECC-TTSCCCHHHHHHHH
T ss_pred CCCCCceEEEcCCcHHHHHHHHHHh-cC--CcEEEEcCCCchH--HH-HHHHHHcCCceEEEeCC-CCCCCCHHHHHHHH
Confidence 9633346999999999999999988 55 7755 55677752 33 45667889999999998 67789999999999
Q ss_pred hhhccccCCC-cceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccCCC
Q 037063 273 VGKRKKKKKK-KRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIFGE 350 (588)
Q Consensus 273 ~~~~~~~~~~-~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~G~ 350 (588)
+ + ++++|++++++|+||..+|+++| ++|+++|+++|+|+++..+. .++++..+++|++++|+||+++.
T Consensus 121 ~--------~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~~~ 190 (353)
T 2yrr_A 121 K--------RRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGM--LPFSMRAMGVDYAFTGSQKCLSA 190 (353)
T ss_dssp H--------HSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTT--SCCCHHHHTCSEEECCTTSTTCC
T ss_pred H--------hCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCccccc--ccccccccCceEEEecCcccccC
Confidence 8 4 78999999999999999999999 99999999999999987652 23333334589999999995542
Q ss_pred CCCceEEEEEeCcchhcccC--CCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCH
Q 037063 351 NPSGFGCLFVKKSSASVLSG--STSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGL 428 (588)
Q Consensus 351 ~P~G~G~L~v~~~~~~~l~~--~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~ 428 (588)
|.|+|+++++++.++.++. .++. ... ........ .+ ..||++.... +++..+++.+.+.|+
T Consensus 191 -~~g~G~~~~~~~~~~~l~~~~~~~~--~~~---------~~~~~~~~-~~-~~~~~~~~~~---~a~~~al~~~~~~~~ 253 (353)
T 2yrr_A 191 -PPGLAPIAASLEARKAFTGKRGWYL--DLA---------RVAEHWER-GG-YHHTTPVLLH---YALLEALDLVLEEGV 253 (353)
T ss_dssp -CSSCEEEEECHHHHHHCCCCSCSTT--CHH---------HHHHHHTT-CC-CSSCCCHHHH---HHHHHHHHHHHHHCH
T ss_pred -CCceEEEEECHHHHHHhccCCCccc--cHH---------HHhhhhhc-CC-CCCCCCHHHH---HHHHHHHHHHHHhhH
Confidence 7799999999998877753 1110 000 00000000 12 3567776654 666788998887789
Q ss_pred HHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEecccc
Q 037063 429 ILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGF 508 (588)
Q Consensus 429 ~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~ 508 (588)
+++.++.+++++++.+.|+++ +++++.+.. ..+.++.|.+++ + ++...+.+.|.++||.++.|.
T Consensus 254 ~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~--~~~~~~~~~~~~--~--~~~~~~~~~l~~~gi~v~~g~ 317 (353)
T 2yrr_A 254 AARERRAREVYAWVLEELKAR----------GFRPYPKAS--PLPTVLVVRPPE--G--VDADRLVRALYAEGVAVAGGI 317 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT----------TCEESCSSS--BCTTEEEEECCT--T--CCHHHHHHHHHHTTEECEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHC----------CCccccCcc--CCCeEEEEECCC--C--CCHHHHHHHHHHCCEEEeCCc
Confidence 999999999999999999884 356665421 235666787742 1 457778888888899999885
Q ss_pred ccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHH-HHHHHHHHhhhh
Q 037063 509 LQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTY-RLWAFVSRFLDA 568 (588)
Q Consensus 509 ~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~-~li~~l~~~l~~ 568 (588)
.|. +...+|+|++.+++.+|++ ++++.|+++++.
T Consensus 318 ~~~--------------------------~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 318 GPT--------------------------RGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp GGG--------------------------TTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred ccc--------------------------CCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 431 1128999998889999999 999999988753
No 24
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=6.6e-31 Score=273.39 Aligned_cols=340 Identities=15% Similarity=0.084 Sum_probs=253.9
Q ss_pred eecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHHhC
Q 037063 114 CFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFMN 193 (588)
Q Consensus 114 yLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~lg 193 (588)
||.++|.++.|+.+++++.+.+.. + .+....+.++++|+.+++++|
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~~------~----------------------------~~~~~~~~~~~l~~~la~~~g 48 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQLH------H----------------------------RTEAAREVFLKARGLLREAFR 48 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCCC------T----------------------------TSHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCCCCHHHHHHhccCCCC------c----------------------------cCHHHHHHHHHHHHHHHHHhC
Confidence 899999999999999998654421 0 000114667899999999999
Q ss_pred CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHH
Q 037063 194 ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKI 272 (588)
Q Consensus 194 a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i 272 (588)
++++ .|++|+|+|+|+.+++.++ +++||+|++ ..+|++. .+ ...++..|++++.++++ +++.+|+++|++
T Consensus 49 ~~~~--~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~--~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~-- 119 (352)
T 1iug_A 49 TEGE--VLILTGSGTLAMEALVKNL-FAPGERVLVPVYGKFSE--RF-YEIALEAGLVVERLDYP-YGDTPRPEDVAK-- 119 (352)
T ss_dssp CSSE--EEEEESCHHHHHHHHHHHH-CCTTCEEEEEECSHHHH--HH-HHHHHHTTCEEEEEECC-TTCCCCTTTSCC--
T ss_pred CCCc--eEEEcCchHHHHHHHHHhc-cCCCCeEEEEeCCchhH--HH-HHHHHHcCCceEEEeCC-CCCCCCHHHHhc--
Confidence 9754 5999999999999999998 899999664 5567652 23 45667789999999997 566788776653
Q ss_pred hhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc--CcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCc-cC
Q 037063 273 VGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK--GWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYK-IF 348 (588)
Q Consensus 273 ~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~--g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K-~~ 348 (588)
+++++|++++++|+||.++|+++| ++|+++ |+++|+|+++..+ ..++++..+++|++++|+|| ++
T Consensus 120 ---------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~--~~~~~~~~~~~d~~~~s~~K~~~ 188 (352)
T 1iug_A 120 ---------EGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLL--VGEVALEAMGVDAAASGSQKGLM 188 (352)
T ss_dssp ---------SSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBT--TBCCCSGGGTCSEEEEESSSTTC
T ss_pred ---------cCCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCcccc--CcceeccccCeeEEEecCccccc
Confidence 368899999999999999999999 999999 9999999998765 22344444458999999999 55
Q ss_pred CCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCH
Q 037063 349 GENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGL 428 (588)
Q Consensus 349 G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~ 428 (588)
| |.|+|+++++++.++.+.+ .+ ....... .+.. ....+ ..||++...+ +++..+++.+.+. +
T Consensus 189 ~--~~g~G~~~~~~~~~~~~~~--~~--~~~~~~~------~~~~-~~~~~-~~~~~~~~~~---~a~~~al~~~~~~-~ 250 (352)
T 1iug_A 189 C--PPGLGFVALSPRALERLKP--RG--YYLDLAR------ELKA-QKEGE-SAWTPAINLV---LAVAAVLEEVLPR-L 250 (352)
T ss_dssp C--CSCEEEEEECHHHHHTCCC--CS--STTCHHH------HHHH-HTTTC-CSSCCCHHHH---HHHHHHHHHHGGG-H
T ss_pred C--CCceeEEEECHHHHHHhhC--CC--ceeeHHH------HHhh-cccCC-CCCCCCHHHH---HHHHHHHHHHHHH-H
Confidence 5 7899999999988776655 11 1000000 0000 00022 4567776654 5667888887665 7
Q ss_pred HHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEecccc
Q 037063 429 ILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGF 508 (588)
Q Consensus 429 ~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~ 508 (588)
+++.++.+++++++.+.|+++ +++++.+. ..+.++.|.+.+ | ++...+.+.|.++||.++.|.
T Consensus 251 ~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~---~~~~~~~~~~~~--~--~~~~~~~~~l~~~gi~v~~~~ 313 (352)
T 1iug_A 251 EEHLALKAWQNALLYGVGEEG----------GLRPVPKR---FSPAVAAFYLPE--G--VPYARVKEAFAQRGAVIAGGQ 313 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT----------TCEESCSS---BCTTCEEEECCT--T--CCHHHHHHHHHTTTEECEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHC----------CCcccccc---cCCeEEEEEcCC--C--CCHHHHHHHHHHCCEEEEeCC
Confidence 899999999999999999984 35666542 246788888763 1 457778888888899998874
Q ss_pred ccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 509 LQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 509 ~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.+ .+...||+|++.+++.+|++++++.|++++++
T Consensus 314 ~~--------------------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 347 (352)
T 1iug_A 314 GP--------------------------LKGKVFRLSLMGAYDRYEALGVAGMFREVLEE 347 (352)
T ss_dssp GG--------------------------GTTTEEEECCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred Cc--------------------------cCCCEEEEEccccCCHHHHHHHHHHHHHHHHH
Confidence 21 11228999999999999999999999998764
No 25
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=100.00 E-value=3.5e-31 Score=277.53 Aligned_cols=352 Identities=10% Similarity=0.078 Sum_probs=248.4
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
.+.+|||++|.+++|+.+++++.+.+.. +.++.++. + ...+ ++....++.+++|++++
T Consensus 2 ~~~~~l~~~~~~~~~~~v~~a~~~~~~~--~~~~~~~~----------~------~~~~----~~~~~~~~~~~~~~~la 59 (362)
T 2c0r_A 2 SERAYNFNAGPAALPLEVLERAQAEFVD--YQHTGMSI----------M------EMSH----RGAVYEAVHNEAQARLL 59 (362)
T ss_dssp CCCCEECCSSSCCCCHHHHHHHHHTSSS--STTSSSCG----------G------GSCT----TSHHHHHHHHHHHHHHH
T ss_pred CcceeeccCCCCCCCHHHHHHHHHHHhh--hhhcCccc----------c------ccCC----CcHHHHHHHHHHHHHHH
Confidence 4679999999999999999998776642 12221100 0 0000 11112567889999999
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccC--CCC-ccCH
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAW--PNL-RIHS 265 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~--~~~-~i~~ 265 (588)
+++|++++...+++|+|+|+|+++++.++ +++||+|+ ....+++ ..+ ...++..| +++.++++. ..+ .++.
T Consensus 60 ~~~g~~~~~~~i~~t~g~t~a~~~~~~~l-~~~gd~vl~~~~~~~~--~~~-~~~~~~~g-~~~~v~~~~~~~~~~~~~~ 134 (362)
T 2c0r_A 60 ALLGNPTGYKVLFIQGGASTQFAMIPMNF-LKEGQTANYVMTGSWA--SKA-LKEAKLIG-DTHVAASSEASNYMTLPKL 134 (362)
T ss_dssp HHTTCCSSEEEEEESSHHHHHHHHHHHHH-CCTTCEEEEEECSHHH--HHH-HHHHHHHS-CEEEEEECGGGTTCSCCCG
T ss_pred HHhCCCCCcEEEEECCCchHHHHHHHHhc-CCCCCeEEEEecCcHh--HHH-HHHHHHhC-CeEEEecccccccccCCCH
Confidence 99999643123578899999999999999 79999965 4444443 223 34556679 999998862 122 2465
Q ss_pred HHHHHHHhhhccccCCCcceEEEEeCCCCCCCcc-CCHHHHHHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEecc
Q 037063 266 GKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGAR-YSYMWMSVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSF 344 (588)
Q Consensus 266 e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~-~pl~~I~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~ 344 (588)
++++ ++ ++|++|++++++|+||.. .|+++| +|+++++|+++..+ ..++++.. .|++++|+
T Consensus 135 ~~~~--i~--------~~t~~v~~~~~~n~tG~~~~~l~~i-----~~~~vivD~a~~~~--~~~~~~~~--~d~~~~s~ 195 (362)
T 2c0r_A 135 QEIQ--LQ--------DNAAYLHLTSNETIEGAQFKAFPDT-----GSVPLIGDMSSDIL--SRPFDLNQ--FGLVYAGA 195 (362)
T ss_dssp GGCC--CC--------TTEEEEEEESEETTTTEECSSCCCC-----TTSCEEEECTTTTT--SSCCCGGG--CSEEEEET
T ss_pred HHcc--cC--------CCcCEEEEeCCcCccceeccccccc-----CCCEEEEEChhhcc--CCccchhH--CcEEEEec
Confidence 5543 44 689999999999999996 566655 89999999999887 33455544 49999999
Q ss_pred CccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHH
Q 037063 345 YKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHAD 424 (588)
Q Consensus 345 ~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~ 424 (588)
||++| |.|+|++++++++++.+.+.... ..+ ....... .. ..+|++...+ +++..+|+.+.
T Consensus 196 ~K~~g--~~G~G~l~~~~~~~~~l~~~~~~---~~~-------~~~~~~~---~~-~~~t~~~~~~---~a~~~al~~~~ 256 (362)
T 2c0r_A 196 QKNLG--PSGVTVVIVREDLVAESPKHLPT---MLR-------YDTYVKN---NS-LYNTPPSFGI---YMVNEVLKWIE 256 (362)
T ss_dssp TTTTC--CSSCEEEEEEGGGSSSCCTTSCG---GGC-------HHHHHHT---TT-CSSCCCHHHH---HHHHHHHHHHH
T ss_pred ccccc--CcCcEEEEEcHHHHhhccccCch---HHh-------HHHHhhc---cC-cCCCchHHHH---HHHHHHHHHHH
Confidence 99999 78999999999988776542111 000 0000000 01 3567776664 67789999888
Q ss_pred Hh-CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCc
Q 037063 425 AL-GLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNI 502 (588)
Q Consensus 425 ~~-G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI 502 (588)
+. |++.+.++.+++++++.+.|+++ +.+ +++.+.. ...++++.|.+.+ + .+...+.+.|.++||
T Consensus 257 ~~~~~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~--~--~~~~~~~~~L~~~gi 322 (362)
T 2c0r_A 257 ERGGLEGVQQANRKKASLIYDAIDQS---------GGFYRGCVDVD-SRSDMNITFRLAS--E--ELEKEFVKASEQEGF 322 (362)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHTS---------TTSSEESSCGG-GBCSSEEEEECSC--H--HHHHHHHHHHHHTTE
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHc---------CCccccCCChH-HcCCcEEEEEcCC--c--chHHHHHHHHHHCCC
Confidence 76 68999999999999999999985 223 5554321 1235677887753 1 345677788888999
Q ss_pred EeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 503 SLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 503 ~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.++.|..+ .+ .||+|++.+++.|||++++++|++++++
T Consensus 323 ~~~~g~~~--------------------------~~--~iRis~~~~~~~e~i~~l~~~l~~~~~~ 360 (362)
T 2c0r_A 323 VGLKGHRS--------------------------VG--GLRASIYNAVPYESCEALVQFMEHFKRS 360 (362)
T ss_dssp ESCBCCTT--------------------------TC--SEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred eeccCCCC--------------------------CC--EEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 88766322 12 7999999999999999999999998753
No 26
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.98 E-value=2.1e-30 Score=275.68 Aligned_cols=365 Identities=11% Similarity=0.051 Sum_probs=268.2
Q ss_pred ccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 104 YFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 104 f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
|+.+. ....||...+-..+++.+++++.+.+. +.. . ....+.+++
T Consensus 6 ~~~~~-~~~~~~~~pgp~~~~~~v~~a~~~~~~----~~~------------------------~------~~~~~~~~~ 50 (411)
T 3nnk_A 6 FSQLN-PPSRLLMGPGPINADPRVLRAMSSQLI----GQY------------------------D------PAMTHYMNE 50 (411)
T ss_dssp SCSCC-CCCCEEESSSCCCCCHHHHHHHTSCCC----CTT------------------------C------HHHHHHHHH
T ss_pred ccccC-CccceeecCCCCCCCHHHHHHhhcccc----ccc------------------------c------HHHHHHHHH
Confidence 44443 456789999999999999998753321 000 0 011467889
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCc
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLR 262 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~ 262 (588)
+++++++++|++++ ..|++|+|+|+|+.+++.++ +++||+|+ ....|+++. +...++..|++++.++++ .++.
T Consensus 51 ~~~~la~~~~~~~~-~~v~~~~sgt~al~~~~~~~-~~~gd~Vl~~~~~~~~~~---~~~~~~~~g~~~~~v~~~-~~~~ 124 (411)
T 3nnk_A 51 VMALYRGVFRTENR-WTMLVDGTSRAGIEAILVSA-IRPGDKVLVPVFGRFGHL---LCEIARRCRAEVHTIEVP-WGEV 124 (411)
T ss_dssp HHHHHHHHHTCCCS-EEEEEESCHHHHHHHHHHHH-CCTTCEEEEEECSHHHHH---HHHHHHHTTCEEEEEECC-TTCC
T ss_pred HHHHHHHHhCCCCC-cEEEECCCcHHHHHHHHHHh-cCCCCEEEEecCCchHHH---HHHHHHHcCCeEEEEecC-CCCC
Confidence 99999999999743 35899999999999999999 89999966 455565422 245677889999999997 6788
Q ss_pred cCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEE
Q 037063 263 IHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLI 341 (588)
Q Consensus 263 i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv 341 (588)
+|+++|+++|++ .++++|++++++|+||.+.|+++| ++|+++|+++|+|+++..+ ..++++..+++|+++
T Consensus 125 ~d~~~l~~~i~~-------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~--~~~~~~~~~~~d~~~ 195 (411)
T 3nnk_A 125 FTPDQVEDAVKR-------IRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLG--GNPLETDVWGLDAVS 195 (411)
T ss_dssp CCHHHHHHHHHH-------HCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBT--TBCCCTTTTTCSEEE
T ss_pred CCHHHHHHHHhh-------CCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccC--CcccchhccCCcEEE
Confidence 899999999982 279999999999999999999999 9999999999999998776 334455555699999
Q ss_pred eccCcc-CCCCCCceEEEEEeCcchhcccCC------CCCC---CceEeeecCCCcccccccc------cccccccCCCC
Q 037063 342 CSFYKI-FGENPSGFGCLFVKKSSASVLSGS------TSSV---STIMGIEPSFSEIIELETL------DESSQSKFPES 405 (588)
Q Consensus 342 ~S~~K~-~G~~P~G~G~L~v~~~~~~~l~~~------~~g~---~g~v~~~~~~~~~~~~~~~------~~~~f~e~GT~ 405 (588)
+|+||+ +| |.|+|++++++++++.+.+. +.|+ .|....... ..++.. ...++ +.||+
T Consensus 196 ~s~~K~l~~--~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~ 268 (411)
T 3nnk_A 196 AGMQKCLGG--PSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYS----NYFDLGMVMDYWGPERL-NHHTE 268 (411)
T ss_dssp CCSTTTTCC--CSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSC----STTCHHHHHHHHSTTCC-CCSCC
T ss_pred ecCccccCC--CCceEEEEECHHHHHHHhhcccccccccccccccccCCCCcc----cccchHHHHhhhccccC-CCCCC
Confidence 999995 56 78999999999988766543 2221 011000000 000000 01134 66788
Q ss_pred CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCC
Q 037063 406 SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNG 485 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g 485 (588)
+...+ +++..+++.+.+.|++++.++.+.+++++.+.|.++ +++++.+.. ...+.++.|.+++ +
T Consensus 269 ~~~~~---~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~-~~~~~~~~~~~~~--~ 332 (411)
T 3nnk_A 269 ATTAL---FGARECARLILQEGLDYGIARHKLHGDALVKGIQAM----------GLETFGDLK-HKMNNVLGVVIPQ--G 332 (411)
T ss_dssp CHHHH---HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----------TCCBCSCGG-GBCSSEEEEECCT--T
T ss_pred CHHHH---HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc----------CCEeCCCcc-cccccEEEEECCC--C
Confidence 87775 677789998888899999999999999999999985 344554432 1245788888753 1
Q ss_pred CCcCHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec-CCCCCHHHHHHHHHHHH
Q 037063 486 TRIDPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL-GCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 486 ~~i~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl-g~~~t~eDv~~li~~l~ 563 (588)
++...+.+.| +++||.++.|... .+..+||+|+ ++.++.|||+++++.|+
T Consensus 333 --~~~~~l~~~l~~~~gi~v~~g~~~--------------------------~~~~~iRi~~~~~~~~~~~i~~~~~~l~ 384 (411)
T 3nnk_A 333 --INGDQARKLMLEDFGIEIGTSFGP--------------------------LHGKVWRIGTMGYNARKDCVMTTLSALE 384 (411)
T ss_dssp --CCHHHHHHHHHHHHSEEEEECCGG--------------------------GTTTEEEEECCGGGCSHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHhcCeEEeCccCC--------------------------CCCCEEEEeCccCcCCHHHHHHHHHHHH
Confidence 4567776655 5559999877311 1112899998 77889999999999999
Q ss_pred Hhhhhh
Q 037063 564 RFLDAD 569 (588)
Q Consensus 564 ~~l~~~ 569 (588)
+++++.
T Consensus 385 ~~l~~~ 390 (411)
T 3nnk_A 385 AVLNYL 390 (411)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 998764
No 27
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.97 E-value=6.2e-30 Score=268.93 Aligned_cols=352 Identities=10% Similarity=0.045 Sum_probs=254.1
Q ss_pred eeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHH
Q 037063 112 YVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDF 191 (588)
Q Consensus 112 ~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~ 191 (588)
.+|+-+.+..++|+.+++++.+.+.. | .. ....+.+++++++++++
T Consensus 19 ~~~~~~pgp~~~~~~v~~a~~~~~~~------~----------------------~~------~~~~~~~~~~~~~la~~ 64 (376)
T 3f0h_A 19 GMLNFTVGPVMSSEEVRAIGAEQVPY------F----------------------RT------TEFSSTMLENEKFMLEY 64 (376)
T ss_dssp SCEECSSSSCCCCHHHHHHHTSCCCC------C----------------------SS------HHHHHHHHHHHHHHHHH
T ss_pred CceeecCCCCCCcHHHHHHhcCCCCC------C----------------------CC------HHHHHHHHHHHHHHHHH
Confidence 45666778888999999987543310 0 00 01146788999999999
Q ss_pred hCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHH
Q 037063 192 MNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMK 270 (588)
Q Consensus 192 lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~ 270 (588)
+|++++...+++|+|+|+|+.+++.++ +++||+|++. ..+++ ..+ ...++..|++++.++.+ .++.+|+++|++
T Consensus 65 ~g~~~~~~~i~~~~ggt~al~~~~~~~-~~~gd~vi~~~~~~~~--~~~-~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~ 139 (376)
T 3f0h_A 65 AKAPEGSKAVFMTCSSTGSMEAVVMNC-FTKKDKVLVIDGGSFG--HRF-VQLCEIHEIPYVALKLE-HGKKLTKEKLYE 139 (376)
T ss_dssp HTCCTTCEEEEESSCHHHHHHHHHHHH-CCTTCCEEEEESSHHH--HHH-HHHHHHTTCCEEEEECC-TTCCCCHHHHHT
T ss_pred hCCCCCceEEEEcCChhHHHHHHHHhc-cCCCCeEEEEeCChhh--HHH-HHHHHHcCCceEEEeCC-CCCCCCHHHHHH
Confidence 999754333455899999999999999 8999997654 34553 222 35667789999999987 567899999998
Q ss_pred HHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccCC
Q 037063 271 KIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIFG 349 (588)
Q Consensus 271 ~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~G 349 (588)
+++ +++++|++++++|+||.++|+++| ++|+++|+++|+|+++..+ ..++++..+++|++++|+||++|
T Consensus 140 ~~~--------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~--~~~~~~~~~~~d~~~~s~~K~l~ 209 (376)
T 3f0h_A 140 YDN--------QNFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFL--ADPFNMNECGADVMITGSQKVLA 209 (376)
T ss_dssp TTT--------SCCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTT--TSCCCHHHHTCSEEEEETTTTTC
T ss_pred hhc--------cCceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCcccc--CccccccccCccEEEecCccccc
Confidence 776 789999999999999999999999 9999999999999998876 23344444458999999999887
Q ss_pred CCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHh-CH
Q 037063 350 ENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL-GL 428 (588)
Q Consensus 350 ~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~-G~ 428 (588)
. |.|+|++++++++++.+.+....+ ..... ..... .+...+|+.......++++.++++.+.+. |+
T Consensus 210 ~-~~G~g~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~-----~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~ 276 (376)
T 3f0h_A 210 C-PPGISVIVLAPRGVERVEKSKVRT-MYFDL------KDALK-----NQERGQTPFTPAVGILLQINERLKEIKKHGGA 276 (376)
T ss_dssp C-CSSCEEEEECHHHHHHHHTCCCCC-STTCH------HHHHH-----HHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHH
T ss_pred C-CCceEEEEECHHHHHHhhcCCCCc-eeecH------HHHHh-----hcccCCCCCCCcHHHHHHHHHHHHHHHHhcCH
Confidence 4 779999999999888776533221 00000 00000 01023344433332236677889988887 58
Q ss_pred HHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhC-CcEeccc
Q 037063 429 ILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRH-NISLSCG 507 (588)
Q Consensus 429 ~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~-gI~v~~G 507 (588)
+++.++.+.+++++.+.|.++ +++++.+. ....++.+...+ ++...+.+.|.++ ||.++.|
T Consensus 277 ~~~~~~~~~~~~~l~~~L~~~----------~~~~~~~~---~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g 338 (376)
T 3f0h_A 277 DAEVARIASQAADFRAKIKDL----------PFELVSES---PANGVTSVHPTT-----ANAYDIFLKLKDEYGIWICPN 338 (376)
T ss_dssp HHHHHHHHHHHHHHHHHTTTS----------SEEECCSS---BBTTEEEEEESS-----SCHHHHHHHHHHHSSEECEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHc----------CCccCccc---cCceEEEEeCCC-----CCHHHHHHHHHHhCCEEEecC
Confidence 999999999999999999875 35665542 234555555333 4567776666555 9999877
Q ss_pred cccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 508 FLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 508 ~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
... .+..+||+|++.++|.||++++++.|++++++.
T Consensus 339 ~~~--------------------------~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~~ 374 (376)
T 3f0h_A 339 GGE--------------------------MKDTIFRVGHIGALTHEDNTTLVNAFKDLQKRN 374 (376)
T ss_dssp CGG--------------------------GTTTCEEEECCSSCCHHHHHHHHHHHHHHHHTT
T ss_pred ccc--------------------------cCCCEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 210 112289999999999999999999999988754
No 28
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.97 E-value=3.1e-30 Score=272.22 Aligned_cols=361 Identities=14% Similarity=0.075 Sum_probs=261.8
Q ss_pred CeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHH
Q 037063 111 NYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMD 190 (588)
Q Consensus 111 ~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~ 190 (588)
...||++.+....++.+++++.+.+.. .. . ....+..+++++++++
T Consensus 22 ~~~~~~~p~p~~~~~~v~~a~~~~~~~----~~------------------------~------~~~~~~~~~l~~~la~ 67 (393)
T 3kgw_A 22 PTRLLLGPGPSNLAPRVLAAGSLRMIG----HM------------------------Q------KEMLQIMEEIKQGIQY 67 (393)
T ss_dssp CCCEECSSSCCCCCHHHHHHTTCCCCC----TT------------------------S------HHHHHHHHHHHHHHHH
T ss_pred ccceeccCCCCCCCHHHHHHhcccccC----cc------------------------c------HHHHHHHHHHHHHHHH
Confidence 345889899999999999987533210 00 0 0014677899999999
Q ss_pred HhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHH
Q 037063 191 FMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLM 269 (588)
Q Consensus 191 ~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~ 269 (588)
+++.+. ++.|+||+|+|+|+.+++.++ +++||+|++ ...|++. . +...++..|++++.++++ .++.+|.++|+
T Consensus 68 ~~~~~~-~~~v~~~~gg~~al~~~~~~~-~~~gd~vl~~~~~~~~~--~-~~~~~~~~g~~~~~~~~~-~~~~~d~~~l~ 141 (393)
T 3kgw_A 68 VFQTRN-PLTLVVSGSGHCAMETALFNL-LEPGDSFLTGTNGIWGM--R-AAEIADRIGARVHQMIKK-PGEHYTLQEVE 141 (393)
T ss_dssp HHTCCC-SEEEEESCCTTTHHHHHHHHH-CCTTCEEEEEESSHHHH--H-HHHHHHHTTCEEEEEECC-TTCCCCHHHHH
T ss_pred HhCCCC-CcEEEEeCCcHHHHHHHHHhc-CCCCCEEEEEeCCchhH--H-HHHHHHHcCCceEEEeCC-CCCCCCHHHHH
Confidence 999964 345999999999999999999 999999664 4555431 1 245667889999999997 66789999999
Q ss_pred HHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccC
Q 037063 270 KKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIF 348 (588)
Q Consensus 270 ~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~ 348 (588)
++|++ .++++|++++++|+||...|+++| ++|+++|+++|+|+++..+ ...+++..+++|++++|+||++
T Consensus 142 ~~i~~-------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g--~~~~~~~~~~~d~~~~s~sK~~ 212 (393)
T 3kgw_A 142 EGLAQ-------HKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLG--GVPIYMDQQGIDIMYSSSQKVL 212 (393)
T ss_dssp HHHHH-------HCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTT--TSCCCTTTTTCCEEEEESSSTT
T ss_pred HHHhh-------CCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCcccc--CcccchhhcCCCEEEecCcccc
Confidence 99982 279999999999999999999999 9999999999999998865 3344555566999999999965
Q ss_pred CCCCCceEEEEEeCcchhcccCCCCCCCce-EeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhC
Q 037063 349 GENPSGFGCLFVKKSSASVLSGSTSSVSTI-MGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALG 427 (588)
Q Consensus 349 G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~-v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G 427 (588)
+. |.|+|++++++++++.+.+...++... .+... ....+......++ ..+|++.... +++..+++.+.+.+
T Consensus 213 ~~-~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~---~a~~~al~~~~~~~ 284 (393)
T 3kgw_A 213 NA-PPGISLISFNDKAKYKVYSRKTKPVSFYTDITY---LAKLWGCEGETRV-IHHTTPVTSL---YCLRESLALIAEQG 284 (393)
T ss_dssp CC-CSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHH---HHHHTTCSSSCCC-CCCCCCHHHH---HHHHHHHHHHHHHC
T ss_pred cC-CCceeEEEECHHHHHHHhccCCCCCceeecHHH---HHHhhhhccccCC-CCCCCCHHHH---HHHHHHHHHHHHhh
Confidence 42 789999999999888776543221000 00000 0000000011133 5677777664 67778899888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhC-CcEecc
Q 037063 428 LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRH-NISLSC 506 (588)
Q Consensus 428 ~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~-gI~v~~ 506 (588)
++++.++.+++++++.+.|.++ +++++.+......+.++.|.+.+ + ++...+.+.|.++ ||.++.
T Consensus 285 ~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~l~~~~gi~v~~ 350 (393)
T 3kgw_A 285 LENCWRRHREATAHLHKHLQEM----------GLKFFVKDPEIRLPTITTVTVPA--G--YNWRDIVSYVLDHFSIEISG 350 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT----------TCCBSSSSGGGBCSSEEEEECCT--T--BCHHHHHHHHHHHHCEECBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHc----------CCeeccCChhhcCCeEEEEeCCC--C--CCHHHHHHHHHHhCCEEEeC
Confidence 9999999999999999999985 24444332211223566677653 1 4567776666554 999998
Q ss_pred ccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec-CCCCCHHHHHHHHHHHHHhhhh
Q 037063 507 GFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL-GCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 507 G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl-g~~~t~eDv~~li~~l~~~l~~ 568 (588)
|..+ .+..+||+++ ++.++.+|++++++.|++++++
T Consensus 351 g~~~--------------------------~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 387 (393)
T 3kgw_A 351 GLGP--------------------------TEERVLRIGLLGYNATTENVDRVAEALREALQH 387 (393)
T ss_dssp CCGG--------------------------GTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred Cccc--------------------------CCCCEEEEEecccCCCHHHHHHHHHHHHHHHHh
Confidence 7533 1122899998 6667999999999999998865
No 29
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.97 E-value=8.4e-32 Score=292.05 Aligned_cols=385 Identities=9% Similarity=0.006 Sum_probs=253.5
Q ss_pred hHHHHHHHHH--hCCCCCCc-hhHHHHHhhhccCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCC
Q 037063 76 LQESFANFTK--VFPQYLQT-DQADRIRAQDYFHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQ 152 (588)
Q Consensus 76 ~~~~~~~f~~--~~p~y~~~-~~~~~iR~~~f~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~ 152 (588)
.++...+.+. ..|+.+.+ .++.++|+ +|+.+ ...+||||+++|+.|..|++++.+..... +.++.+..
T Consensus 45 ~~~~~~~~~~~~~lp~~g~~~~~i~~~~~-~~~~~--~~~~yld~aa~~~~~~~v~~a~~~~~~~~-~~~~~~~~----- 115 (456)
T 2z67_A 45 YLKEIEDVFNHRKIPENGIDDEKIKLFLK-FLSMM--DTDKDPKSVRIGEREARTYSKIHEELSSG-FCHGIGRS----- 115 (456)
T ss_dssp HTHHHHHHHHHCSCCSSCCCHHHHHHHHH-HHHTT--BGGGCTTCEECSSCCCCCSCHHHHHHTTT-CTTCBSBT-----
T ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHHH-HHHhc--cccccccccccccccccccccccCccccc-cCCCccHH-----
Confidence 3333444443 34666543 56888886 69988 67899999999999999888865432111 22221100
Q ss_pred CCCCcccccccccccccccccCCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHH-HHHHHHHhCC-CCCCCeEE-Ec
Q 037063 153 LEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDFMNISEDDYTLVFTANQSS-AFKLLAESYP-FYSNPRLL-TV 229 (588)
Q Consensus 153 ~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~-al~lv~~s~~-~~~gd~ll-~~ 229 (588)
..|. ..++ ... .+....++++++|+++++++|++++ ++||+|+|+ ++.+++.++. +.++++|+ +.
T Consensus 116 --~~~~-----~~~~-~~~-~~~~~~~~~~~~~~~la~~~g~~~~---~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~ 183 (456)
T 2z67_A 116 --GNLV-----DPQP-KAS-GASIMYALTNKILESFFKQLGLNVH---AIATPISTGMSISLCLSAARKKYGSNVVIYPY 183 (456)
T ss_dssp --TBTT-----SCCT-TBH-HHHHHHHHHHHHHHHHHHHTTCCCE---EEEESSCHHHHHHHHHHHHHHHHCCCEEEEEC
T ss_pred --HHHH-----hhCc-ccc-cCcHHHHHHHHHHHHHHHHcCCCCC---EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 0000 0111 000 0001367889999999999999743 999999995 4433444321 12566655 55
Q ss_pred CCCchhHHHHHHHHHHhcCCEEEEEecc--CCCCccCHHHHHHHH-hhhccccCCCcceEEEEeCCCCCCCccCCHHHH-
Q 037063 230 YDHENEAAALMIESSKKRGARVSSAEFA--WPNLRIHSGKLMKKI-VGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM- 305 (588)
Q Consensus 230 ~e~~s~~~~~~~~~a~~~G~~v~~v~~~--~~~~~i~~e~l~~~i-~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I- 305 (588)
.+|++ + .+.++..|++++.++.. .+++.+|+++|+++| +. ....++.+|++..++|+||.+.|+++|
T Consensus 184 ~~h~s--~---~~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~----~~~~~~~~vv~~~~nn~tG~i~~l~~I~ 254 (456)
T 2z67_A 184 ASHKS--P---IKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKE----IELGNRPCVLSTLTFFPPRNSDDIVEIA 254 (456)
T ss_dssp CCCHH--H---HHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHH----HHTTCCEEEEEESSCCTTBCCCCHHHHH
T ss_pred CCcHH--H---HHHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHH----hhCCCeEEEEEeCCCCCCCCcCCHHHHH
Confidence 66664 2 34556789999998872 156789999999999 41 001367888899999999999999999
Q ss_pred HHHHHcCcEEEEeCCC---cCC---CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEe-CcchhcccCCCCCCCce
Q 037063 306 SVAAEKGWHVLLDATA---LGS---KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTI 378 (588)
Q Consensus 306 ~~a~~~g~~vvvDaa~---~~~---~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~ 378 (588)
++|+++|++++||+|. ..+ .+...+ .. ++|++++|+||+++. |.|+|+++++ +++++.+.+.+.|+
T Consensus 255 ~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~--~~-~~D~~~~s~hK~~~~-p~g~G~l~~~~~~~~~~l~~~~~g~--- 327 (456)
T 2z67_A 255 KICENYDIPHIINGAYAIQNNYYLEKLKKAF--KY-RVDAVVSSSDKNLLT-PIGGGLVYSTDAEFIKEISLSYPGR--- 327 (456)
T ss_dssp HHHHHHTCCEEEECTTTTTCHHHHHHHHHHH--TS-CCSEEEEEHHHHHCC-CSSCEEEEESCHHHHHHHHTTSCSC---
T ss_pred HHHHHcCCcEEEECcchHHHHHhhHHHHHhh--CC-CCCEEEEcCCCCcCC-CCCeEEEEEcCHHHHhhcCcCCCCC---
Confidence 9999999999999763 332 111111 11 499999999996553 8999999996 46666676555441
Q ss_pred EeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCC
Q 037063 379 MGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGI 458 (588)
Q Consensus 379 v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~ 458 (588)
..+++ . .++..++..+...|++++.++...+++++.+.|.++.+.
T Consensus 328 ----------------------~~~~~----~---~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~------ 372 (456)
T 2z67_A 328 ----------------------ASATP----V---VNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKK------ 372 (456)
T ss_dssp ----------------------BCSHH----H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
T ss_pred ----------------------CCCCH----H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------
Confidence 01111 1 345567777766788999999999999999999985110
Q ss_pred CeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcE-ecc--------ccccCcccccchHHHHHHHHhhh
Q 037063 459 PLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNIS-LSC--------GFLQNIFFSGEYEQERVRVLETR 529 (588)
Q Consensus 459 ~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~-v~~--------G~~c~~~~~~~~~~~~~~~l~~~ 529 (588)
+++.++.|. ++++|.+... + . ...+.+.|.++||. ++. |.+|..
T Consensus 373 ~g~~v~~~~------~~v~~~~~~~-~--~-~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~----------------- 425 (456)
T 2z67_A 373 TGGKFLDVE------SPIASCISVN-S--D-PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGT----------------- 425 (456)
T ss_dssp SSCCBCCCC------CSSEEEEECS-S--C-HHHHHHHHHHTTEESCEEECTTCHHHHTCSSC-----------------
T ss_pred cCCEecCCC------CeEEEEEecc-c--H-HHHHHHHHHHcCCCcceEEeecCccccccccc-----------------
Confidence 145555542 6778877321 1 1 45677777777762 222 333310
Q ss_pred cCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 530 SGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 530 ~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
...+.||+|+++++|.|||+++++.|++++
T Consensus 426 -------~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 426 -------YTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp -------CSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred -------cCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 112389999999999999999999998764
No 30
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.97 E-value=8.4e-30 Score=271.42 Aligned_cols=329 Identities=13% Similarity=0.106 Sum_probs=245.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.+.++++|+.+++++|++++. .+++++|+|+|+.+++.++ +++||+|+ ....|+++. + ...++..|++++.+++
T Consensus 43 ~~~~~~l~~~la~~~g~~~~~-~~~~~~s~t~al~~~~~~l-~~~gd~Vl~~~~~~~~~~--~-~~~~~~~g~~~~~v~~ 117 (416)
T 3isl_A 43 TGIMNETMEMLRELFQTKNRW-AYPIDGTSRAGIEAVLASV-IEPEDDVLIPIYGRFGYL--L-TEIAERYGANVHMLEC 117 (416)
T ss_dssp HHHHHHHHHHHHHHTTCCCSE-EEEEESCHHHHHHHHHHHH-CCTTCEEEEEESSHHHHH--H-HHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCCc-EEEecCcHHHHHHHHHHHh-cCCCCEEEEecCCcccHH--H-HHHHHhcCCeeEEEec
Confidence 577889999999999997543 3459999999999999999 99999966 456666422 2 5567788999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ .++.+|+++|+++|++ +++++|++++++|+||.+.|+++| ++|+++|+++|+|+++..+ ..++++..+
T Consensus 118 ~-~~~~~d~~~l~~~i~~-------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~--~~~~~~~~~ 187 (416)
T 3isl_A 118 E-WGTVFDPEDIIREIKK-------VKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIG--GCEVKVDEW 187 (416)
T ss_dssp C-TTCCCCHHHHHHHHHH-------HCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTT--TSCCCTTTT
T ss_pred C-CCCCCCHHHHHHHHhh-------CCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCcccc--CCCcchhhc
Confidence 8 6778999999999972 368999999999999999999999 9999999999999998876 334455556
Q ss_pred CCcEEEeccCcc-CCCCCCceEEEEEeCcchhcccCCC---CCCC----------ceEeeecCCCccccc-ccccccccc
Q 037063 336 KPDFLICSFYKI-FGENPSGFGCLFVKKSSASVLSGST---SSVS----------TIMGIEPSFSEIIEL-ETLDESSQS 400 (588)
Q Consensus 336 ~~D~vv~S~~K~-~G~~P~G~G~L~v~~~~~~~l~~~~---~g~~----------g~v~~~~~~~~~~~~-~~~~~~~f~ 400 (588)
++|++++|+||+ +| |.|+|++++++++++.+.+.. .||. |. .......+...+ ......++
T Consensus 188 ~~d~~~~s~~K~l~g--~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~-~~~~~~~~~~~~~~~~~~~~~- 263 (416)
T 3isl_A 188 KIDAAIGGTQKCLSV--PSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNR-PITSNYFDLSQLEDYWSERRL- 263 (416)
T ss_dssp TCSEEECCSSSTTCC--CSSEEEEEECHHHHHHHHTC------------------CC-CCSCSTTCHHHHHHHTSTTCC-
T ss_pred CCCEEEecCccccCC--CCCeEEEEECHHHHHHhhccccccccccccccchhccCCC-CCCccccchHHHHhhhcccCC-
Confidence 699999999995 56 889999999999888776532 1100 00 000000000000 00001144
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEe
Q 037063 401 KFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNV 480 (588)
Q Consensus 401 e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~ 480 (588)
+.||++...+ +++..+++.+...|++++.++.+.+++++.+.|.++ +++++.+.. ...+.++.|.+
T Consensus 264 ~~~~~~~~~~---~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~-~~~~~~~~~~~ 329 (416)
T 3isl_A 264 NHHTEATTML---YALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM----------GLRLFGDDS-CKMPVVTCVEI 329 (416)
T ss_dssp CSSCCCHHHH---HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----------TCCBCSCGG-GBCTTEEEEEC
T ss_pred CCCCCCHHHH---HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc----------CCEeccCcc-ccCCcEEEEeC
Confidence 6778887775 677789999888899999999999999999999984 345555432 12357888887
Q ss_pred ecCCCCCcCHHHHHHHHHh-CCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHH-HHHH
Q 037063 481 FDWNGTRIDPALVQKLADR-HNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFED-TYRL 558 (588)
Q Consensus 481 ~~~~g~~i~~~~v~~~l~~-~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eD-v~~l 558 (588)
++. .+...+.+.|.+ .||.++.|... .+...||+|++.+++.+| |+++
T Consensus 330 ~~~----~~~~~l~~~L~~~~gi~v~~g~~~--------------------------~~~~~iRi~~~~~~~~~e~i~~~ 379 (416)
T 3isl_A 330 PGG----IDGESVRDMLLAQFGIEIASSFGP--------------------------LAGKIWRIGTMGYSCRKENVLFV 379 (416)
T ss_dssp CTT----CCHHHHHHHHHHHHCEECBCCCST--------------------------TTTTEEEEECCGGGCSHHHHHHH
T ss_pred CCC----CCHHHHHHHHHHhCCEEEecCCCC--------------------------CCCCEEEEecccCCCcHHHHHHH
Confidence 531 456777666654 59999877421 122399999987777777 9999
Q ss_pred HHHHHHhhhhh
Q 037063 559 WAFVSRFLDAD 569 (588)
Q Consensus 559 i~~l~~~l~~~ 569 (588)
++.|++++++.
T Consensus 380 ~~~l~~~~~~~ 390 (416)
T 3isl_A 380 LAGLEAVLLRH 390 (416)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 99999998764
No 31
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.97 E-value=3.2e-29 Score=263.92 Aligned_cols=353 Identities=12% Similarity=0.124 Sum_probs=252.3
Q ss_pred CeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHH
Q 037063 111 NYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMD 190 (588)
Q Consensus 111 ~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~ 190 (588)
...|+...+...+++.+++++.+.+.. .++| . ..+...++|+.+++
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a~~~~~~~--~~~~------------------------~--------~~~~~~~~~~~l~~ 49 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKALDVPSLG--HTSP------------------------E--------FVSIFQRVLKNTRA 49 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHTTSCCCCC--TTSH------------------------H--------HHHHHHHHHHHHHH
T ss_pred ccceeecCCCcCchHHHHHHHhccccc--cCCH------------------------H--------HHHHHHHHHHHHHH
Confidence 345777888888888898886433211 1111 0 12356678888888
Q ss_pred HhCCCC--CCceEEEecCHHHHHHHHHHhCC--CCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEec-cCCCCccC
Q 037063 191 FMNISE--DDYTLVFTANQSSAFKLLAESYP--FYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEF-AWPNLRIH 264 (588)
Q Consensus 191 ~lga~~--~e~~vvft~g~T~al~lv~~s~~--~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~-~~~~~~i~ 264 (588)
+++... +.+.|+||+|+|+|+.+++.++. +++||+|++. .+++.... ...++..|++++.+++ + .++.+|
T Consensus 50 ~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~---~~~~~~~g~~~~~v~~~~-~~~~~d 125 (385)
T 2bkw_A 50 VFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRF---ADCLRSYGAQVDVVRPLK-IGESVP 125 (385)
T ss_dssp HTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHH---HHHHHHTTCEEEEECCSS-TTSCCC
T ss_pred HhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHH---HHHHHHcCCceEEEecCC-CCCCCC
Confidence 887631 12359999999999999999883 2899996543 55543232 2455778999999998 6 678899
Q ss_pred HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc--CcEEEEeCCCcCCCCCCCCCCCCCCCcEEE
Q 037063 265 SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK--GWHVLLDATALGSKDMDTLGLSLFKPDFLI 341 (588)
Q Consensus 265 ~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~--g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv 341 (588)
+++|+++|+. .++++|++++++|+||.+.|+++| ++|+++ |+++|+|+++..+ ..++++..+++|+++
T Consensus 126 ~~~l~~~l~~-------~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~--~~~~~~~~~~~d~~~ 196 (385)
T 2bkw_A 126 LELITEKLSQ-------NSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIG--CEEFEFDEWGVDFAL 196 (385)
T ss_dssp HHHHHHHHHH-------SCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTT--TSCCCTTTTTCSEEE
T ss_pred HHHHHHHHhc-------CCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccC--CccccccccCceEEE
Confidence 9999999981 278999999999999999999999 999999 9999999998876 233445555699999
Q ss_pred eccCccCCCCCCceEEEEEeCcchh-ccc------CCCCCCCceEeeecCCCcccccccccccccc-----cCCCCCccc
Q 037063 342 CSFYKIFGENPSGFGCLFVKKSSAS-VLS------GSTSSVSTIMGIEPSFSEIIELETLDESSQS-----KFPESSISG 409 (588)
Q Consensus 342 ~S~~K~~G~~P~G~G~L~v~~~~~~-~l~------~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~-----e~GT~~~~~ 409 (588)
+|+||+++. |.|+|+++++++.++ .+. ...+++ ... .+.... ..++ ..||++..+
T Consensus 197 ~s~~K~~~~-~~G~G~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~----------~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (385)
T 2bkw_A 197 TASQKAIGA-PAGLSISLCSSRFMDYALNDSKNGHVHGYFS-SLR----------RWTPIM-ENYEAGKGAYFATPPVQL 263 (385)
T ss_dssp EESSSTTCC-CSCEEEEEECHHHHHHHTCHHHHCCCSCSTT-CHH----------HHHHHH-HHHHTTCCCCSSCCCHHH
T ss_pred ecCcccccc-CCcceEEEEcHHHHHHHHhhccCCCCCceee-cHH----------HHhhHH-HhhhccCCCCCCCCCHHH
Confidence 999995542 789999999998876 653 112221 100 000000 0120 135666665
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH-HcccCCCCCCCCCeEEEeCCCCCC-CcccEEEEEeecCCCCC
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANAL-MNLHHPHSETGIPLVRIYGPKVMF-DRGPSLAFNVFDWNGTR 487 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L-~~L~h~~~~~g~~~v~i~~p~~~~-~rg~iv~f~~~~~~g~~ 487 (588)
+ +++..+++.+.+.|++++.++.+++++++.+.| +++ +++++.+.... ..+.++.|.+.+
T Consensus 264 ~---~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~----- 325 (385)
T 2bkw_A 264 I---NSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGL----------QLTSVSRYPSNMSAHGLTAVYVAD----- 325 (385)
T ss_dssp H---HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT----------CCEESSCSSSTTBCSSCEEEECSC-----
T ss_pred H---HHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc----------CceecccCcccccCCceEEEecCC-----
Confidence 4 677788998887789999999999999999999 774 46666543211 246788887753
Q ss_pred cCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEe-cC---CCCCHHHHHHHHHHHH
Q 037063 488 IDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAA-LG---CLTNFEDTYRLWAFVS 563 (588)
Q Consensus 488 i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvS-lg---~~~t~eDv~~li~~l~ 563 (588)
...+.+.|.++||.++.|..+. .+...+|+| ++ +.++.||++++++.|+
T Consensus 326 --~~~~~~~l~~~gi~v~~g~~~~-------------------------~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~ 378 (385)
T 2bkw_A 326 --PPDVIAFLKSHGVVIAGGIHKD-------------------------IGPKYIRIGHMGVTACNKNLPYMKNCFDLIK 378 (385)
T ss_dssp --HHHHHHHHHHTTEECBCCCCTT-------------------------TGGGEEEECCCGGGTSSTTCTHHHHHHHHHH
T ss_pred --HHHHHHHHHHCCeEEeCCCCcc-------------------------cCCCEEEEEccccccccCCHHHHHHHHHHHH
Confidence 5567777778999999875431 112389999 76 3579999999999999
Q ss_pred Hhhhh
Q 037063 564 RFLDA 568 (588)
Q Consensus 564 ~~l~~ 568 (588)
+++++
T Consensus 379 ~~~~~ 383 (385)
T 2bkw_A 379 LALQR 383 (385)
T ss_dssp HHTTC
T ss_pred HHHHh
Confidence 88753
No 32
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.97 E-value=5.3e-29 Score=259.96 Aligned_cols=323 Identities=12% Similarity=0.060 Sum_probs=235.7
Q ss_pred HHHHHHHHHHHHHhCCCCCC-ceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 179 ELESKIRKRIMDFMNISEDD-YTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e-~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
+..+++|+.+++++|. +++ ..|+||+|+|+|+.+++.++ .++||+|+ ....+|...+ ...++..|++++.+++
T Consensus 37 ~~~~~l~~~la~~~g~-~~~~~~v~~~~g~t~a~~~~~~~~-~~~gd~vi~~~~~~~~~~~---~~~~~~~g~~~~~v~~ 111 (366)
T 1m32_A 37 GVVEQIRQQLTALATA-SEGYTSVLLQGSGSYAVEAVLGSA-LGPQDKVLIVSNGAYGARM---VEMAGLMGIAHHAYDC 111 (366)
T ss_dssp TTHHHHHHHHHHHHCS-SSSEEEEEEESCHHHHHHHHHHHS-CCTTCCEEEEESSHHHHHH---HHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHHHHHhCC-CCcCcEEEEecChHHHHHHHHHHh-cCCCCeEEEEeCCCccHHH---HHHHHHhCCceEEEeC
Confidence 4567999999999994 332 35999999999999999999 78999855 4434432111 3455677999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ .++.+|+++|+++|++ ..++++|++++++|+||.++|+++| ++|+++|+++|+|+++..+ ..++++..+
T Consensus 112 ~-~~~~~d~~~l~~~l~~------~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~--~~~~~~~~~ 182 (366)
T 1m32_A 112 G-EVARPDVQAIDAILNA------DPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFG--GIPMDIAAL 182 (366)
T ss_dssp C-TTSCCCHHHHHHHHHH------CTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTT--TSCCCTTTT
T ss_pred C-CCCCCCHHHHHHHHhc------CCCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCcccc--CcCcccccc
Confidence 7 6778999999999982 1258899999999999999999999 9999999999999998876 233455555
Q ss_pred CCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHH
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLV 415 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~a 415 (588)
++|++++|+||+++. |.|+|++++++++++.+.+...+. ..+... ....+... . .. ..+|++...+ ++
T Consensus 183 ~~di~~~s~~K~~~~-~~g~G~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~-~-~~-~~~~~~~~~~---~a 250 (366)
T 1m32_A 183 HIDYLISSANKCIQG-VPGFAFVIAREQKLAACKGHSRSL--SLDLYA---QWRCMEDN-H-GK-WRFTSPTHTV---LA 250 (366)
T ss_dssp TCSEEEEESSSTTCC-CSSEEEEEEEHHHHTTCTTCCSCS--TTCHHH---HHHHHHHT-T-TC-CSSCCCHHHH---HH
T ss_pred CccEEEecCcccccC-CCceEEEEECHHHHHhhcCCCCCc--cccHHH---HHhhhccc-C-CC-CCCCCCHHHH---HH
Confidence 699999999996642 789999999998887765432110 000000 00000000 0 00 1245665554 56
Q ss_pred HHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc-EEEEEeecCCCCCcCHHHH
Q 037063 416 ECKGLDHADALG-LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP-SLAFNVFDWNGTRIDPALV 493 (588)
Q Consensus 416 l~~aL~~l~~~G-~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~-iv~f~~~~~~g~~i~~~~v 493 (588)
+.++++.+.+.| ++++.++.+++++++.+.|.++ +++++.+.. .+++ ++.|.+.+..+ .+...+
T Consensus 251 ~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~----------~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~ 316 (366)
T 1m32_A 251 FAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL----------GFNTLLDDE--LHSPIITAFYSPEDPQ--YRFSEF 316 (366)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT----------TCCBSSCGG--GBCSSEEEEECCCCTT--CCHHHH
T ss_pred HHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC----------CCeeccCch--hcCceEEEEEcCccCC--CCHHHH
Confidence 778999888877 8999999999999999999985 244444421 2344 77787753101 457778
Q ss_pred HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 494 QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 494 ~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.+.|.++||.++.|..|. . ..||++++.+++.+||+++++.|++++++
T Consensus 317 ~~~l~~~gi~v~~~~~~~-------------------------~--~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 317 YRRLKEQGFVIYPGKVSQ-------------------------S--DCFRIGNIGEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp HHHHHHTTEECEECCCSS-------------------------S--CEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHCCEEEECCcCCC-------------------------C--CEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 888888899999886541 1 28999999999999999999999988753
No 33
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.96 E-value=8e-29 Score=259.75 Aligned_cols=351 Identities=12% Similarity=0.047 Sum_probs=247.8
Q ss_pred CCeeeecC-CCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHH-
Q 037063 110 NNYVCFDY-IGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKR- 187 (588)
Q Consensus 110 ~~~vyLD~-a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~- 187 (588)
++.+|||+ ++.++.++.+++++.+.+.... .+.. ++.+ ...++ ..+...++|+.
T Consensus 7 ~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~-~~~~--------------------~~~~-~~~~~--~~~~~~~l~~~~ 62 (371)
T 2e7j_A 7 KDFINIDPLQTGGKLTEEARQALLEWGDGYS-VCDF--------------------CTTG-RLDEI--KTPPIHDFIHNQ 62 (371)
T ss_dssp -CCEECCHHHHTCCCCHHHHHHHHHC--------------------------------------------CCHHHHHHTH
T ss_pred CCcEEecccccCCCCCHHHHHHHHHHHhhcc-cCCc--------------------cccc-cchhh--HHHHHHHHHHHH
Confidence 57899999 6688999999999866553210 0000 0000 00000 13446789999
Q ss_pred HHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEe--ccCCCCccC
Q 037063 188 IMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAE--FAWPNLRIH 264 (588)
Q Consensus 188 ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~--~~~~~~~i~ 264 (588)
+++++|++ .|+||+|+|+|+.+++.++ +++||+|++ ...|++ .. ..++..|++++.++ .+ +++.+|
T Consensus 63 la~~~~~~----~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~-~~----~~~~~~g~~~~~v~~~~~-~~~~~d 131 (371)
T 2e7j_A 63 LPKFLGCD----VARVTNGAREAKFAVMHSL-AKKDAWVVMDENCHYS-SY----VAAERAGLNIALVPKTDY-PDYAIT 131 (371)
T ss_dssp HHHHTTSS----EEEEESSHHHHHHHHHHHH-CCTTCEEEEETTCCHH-HH----HHHHHTTCEEEEECCCCT-TTCCCC
T ss_pred HHHHcCCC----EEEEeCChHHHHHHHHHHH-hCCCCEEEEccCcchH-HH----HHHHHcCCeEEEeecccC-CCCCcC
Confidence 99999985 5999999999999999999 899999764 555654 22 23567899999999 76 567899
Q ss_pred HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEec
Q 037063 265 SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICS 343 (588)
Q Consensus 265 ~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S 343 (588)
+++|++++++. ...+++++|++++++|+||..+|+++| ++|+++|+++|+|+++..+. .++++..+.+|++++|
T Consensus 132 ~~~l~~~l~~~---~~~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~di~~~s 206 (371)
T 2e7j_A 132 PENFAQTIEET---KKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGR--MPVSLKEIGADFIVGS 206 (371)
T ss_dssp HHHHHHHHHHH---TTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTT--BCCCHHHHTCSEEEEE
T ss_pred HHHHHHHHHhh---cccCCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCC--CCCChhhcCCCEEEec
Confidence 99999999721 111478999999999999999999999 99999999999999988762 2233333458999999
Q ss_pred cCccCCCCCCceEEEEEeCcchhc-ccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHH
Q 037063 344 FYKIFGENPSGFGCLFVKKSSASV-LSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDH 422 (588)
Q Consensus 344 ~~K~~G~~P~G~G~L~v~~~~~~~-l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~ 422 (588)
+||+++. |.|+|++++++++++. +.+...++ ... . .| +.|+++..+. +++..++++
T Consensus 207 ~sK~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~--~~~----------~------~~-~~~~~~~~~~---~a~~~~l~~ 263 (371)
T 2e7j_A 207 GHKSMAA-SGPIGVMGMKEEWAEIVLRRSEKYK--NKE----------V------EL-LGCTARGATI---ITLMASFPH 263 (371)
T ss_dssp HHHHSSC-CSSCEEEEECTTTTTTTTCBCSSCT--TSB----------G------GG-TTCCCCSHHH---HHHHHHHHH
T ss_pred CCcCCCC-CCCcEEEEEechhhhhhccccccCc--ccc----------c------cc-ccCCcCHHHH---HHHHHHHHH
Confidence 9996664 6799999999998777 66544321 100 0 12 4667777664 566677877
Q ss_pred HHHhCHHHHHHHH--HHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhC
Q 037063 423 ADALGLILISNRA--RYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRH 500 (588)
Q Consensus 423 l~~~G~~~i~~r~--~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~ 500 (588)
+.. .+.++. +++++++.+.|.++ +++++.+.. .+++++.+.+. +...+.+.|.++
T Consensus 264 ~~~----~~~~~~~~~~~~~~l~~~L~~~----------~~~~~~~~~--~~~~~~~~~~~-------~~~~~~~~l~~~ 320 (371)
T 2e7j_A 264 VRE----RIKRWDEEVEKARRFAAEMEKL----------GIKQLGDNP--HNHDLMFFHAE-------VLYEISKKAKGG 320 (371)
T ss_dssp HHH----HGGGHHHHHHHHHHHHHHHHHT----------TCEEESSSS--CCSSEEEEECH-------HHHHHHHHSSSG
T ss_pred HHH----HHHHHHHHHHHHHHHHHHHHHc----------CcEEecCCC--ccCceEEEECC-------CHHHHHHHHHHC
Confidence 654 667788 88999999999884 456666532 24678777764 255666777788
Q ss_pred CcEeccccccCcccccchHHHHHHHHh-hhcCCCCCcCCccEEE-EecCCC-CCHHHHHHHHHHHHHhhhh
Q 037063 501 NISLSCGFLQNIFFSGEYEQERVRVLE-TRSGTNETRSGVSVVT-AALGCL-TNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 501 gI~v~~G~~c~~~~~~~~~~~~~~~l~-~~~~~~~~~~g~~~vR-vSlg~~-~t~eDv~~li~~l~~~l~~ 568 (588)
||.++. ... ... .+ .....|| ++++.+ ++.+|++++++.|++++++
T Consensus 321 gi~~~~-~~~--------------~~~~~g-------~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 321 RFFLYR-ELK--------------SRKIHG-------IKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp GGHHHH-HHH--------------HTTEEC-------SCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEe-ccc--------------cccccC-------CCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHh
Confidence 998754 110 000 00 0123899 999998 9999999999999998753
No 34
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.96 E-value=1e-28 Score=261.16 Aligned_cols=320 Identities=11% Similarity=0.058 Sum_probs=234.2
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcC--CEEEEE
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRG--ARVSSA 254 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G--~~v~~v 254 (588)
.++++++|+.+++++|++ +.|+||+|+|+|+++++..+ ++||+|+ ...+|++. .+ ...++..| ++++.+
T Consensus 34 ~~~~~~~~~~l~~~~~~~---~~v~~~~sgt~a~~~~~~~~--~~gd~vi~~~~~~~~~--~~-~~~~~~~g~~~~~~~~ 105 (379)
T 3ke3_A 34 QEVMNDLLSNLKTVYNAE---AAVIIPGSGTYGMEAVARQL--TIDEDCLIIRNGWFSY--RW-TQILEKGKFAKSSTVL 105 (379)
T ss_dssp HHHHHHHHHHHHHHHTCS---EEEEEESCHHHHHHHHHHHH--CTTCEEEEEECSHHHH--HH-HHHHHHHCCSSEEEEE
T ss_pred HHHHHHHHHHHHHHhCCC---CEEEEcCChhHHHHHHHHhC--CCCCeEEEEeCCchhH--HH-HHHHHHhCCCCceEEE
Confidence 688999999999999996 35999999999999988664 6899965 56667653 33 34555556 488888
Q ss_pred eccCC--------CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCc
Q 037063 255 EFAWP--------NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATAL 322 (588)
Q Consensus 255 ~~~~~--------~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~ 322 (588)
+.++. .+.+|+++++++|.. +++++|++++++|++|.++| +++| ++|+++|+++++|+++.
T Consensus 106 ~~~~~g~~~~~~~~~~~d~~~l~~~i~~-------~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~ 178 (379)
T 3ke3_A 106 TAERTEDTEAPKPFAPVDIETAVAKIKE-------DKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS 178 (379)
T ss_dssp ECEESSCCSSCCCEECCCHHHHHHHHHH-------HTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred eccccccccccCCCCCCCHHHHHHHHhh-------cCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 87521 135899999999962 36899999999999999999 9999 99999999999999988
Q ss_pred CCCCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccc--
Q 037063 323 GSKDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS-- 400 (588)
Q Consensus 323 ~~~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~-- 400 (588)
+ ..++++..+++|++++|+||++|. |.|+|++++++++++.+.+....+ ...+ ...+.... ..++
T Consensus 179 -g--~~~~~~~~~~~d~~~~s~~K~l~~-~~g~g~~~~~~~~~~~l~~~~~~~-~~~~-------~~~~~~~~-~~~~~g 245 (379)
T 3ke3_A 179 -G--CVWLDMKELGIDVLISAPQKGWSS-TPCAGLVMLSAAAIKKVESTESNC-FSLD-------LKQWLTIM-RAYENG 245 (379)
T ss_dssp -T--TCCCCHHHHTCSEEEECTTTTTCS-CCCEEEEEECHHHHHHHHTCCCSC-STTC-------HHHHHHHH-HHHHTT
T ss_pred -C--CccccccccCCCEEEecchhhcCC-CCceEEEEECHHHHHhhhcCCCCc-eeec-------HHHHHHHH-Hhhhcc
Confidence 6 344555555699999999997764 889999999999988776532110 0000 00000000 0110
Q ss_pred ---cCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE
Q 037063 401 ---KFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA 477 (588)
Q Consensus 401 ---e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~ 477 (588)
..+|++...+ +++.++|+.+.+.|++++.+|.+.+++++++.|.++ +++++.+.. .+++++.
T Consensus 246 ~~~~~~t~~~~~~---~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~----------g~~~~~~~~--~~~~~i~ 310 (379)
T 3ke3_A 246 GHAYHATMPTDSL---RQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK----------GIESVAAEG--FEAPGVV 310 (379)
T ss_dssp SCCCSSCCCHHHH---HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT----------TCCBSBCTT--CBCSSEE
T ss_pred CCCCCCCCCHHHH---HHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc----------CCEecCCcc--ccCceEE
Confidence 1347777765 788899999998899999999999999999999986 244555432 3555443
Q ss_pred -EEeecCCCCCcCHHH-HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHH
Q 037063 478 -FNVFDWNGTRIDPAL-VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDT 555 (588)
Q Consensus 478 -f~~~~~~g~~i~~~~-v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv 555 (588)
+...+ .+. ..+.|.++||.+++|..|..+. ..+...||+|++.++|.+||
T Consensus 311 ~~~~~~-------~~~~~~~~L~~~Gi~v~~g~~~~~~~---------------------~~~~~~lRis~~~~~t~~di 362 (379)
T 3ke3_A 311 VSYTER-------DDMHKGSAFAEAGLQIAAGVPLKVGE---------------------PDNFKTFRLGLFGLDKLTDI 362 (379)
T ss_dssp EEECSC-------HHHHSSHHHHHTTCCCEECCCCSSCC---------------------CTTCCEEEEECCSHHHHTCH
T ss_pred EEccCC-------cchHHHHHHHHCCeEEeCCccccccc---------------------cCcCCEEEEeCCcCCCHHHH
Confidence 44322 222 2567788899999887653110 01123899999999999999
Q ss_pred HHHHHHHHHhhhh
Q 037063 556 YRLWAFVSRFLDA 568 (588)
Q Consensus 556 ~~li~~l~~~l~~ 568 (588)
+++++.|++++++
T Consensus 363 ~~~~~~l~~~l~~ 375 (379)
T 3ke3_A 363 DGTVERFEKALDE 375 (379)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998765
No 35
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.96 E-value=1.8e-28 Score=256.21 Aligned_cols=349 Identities=13% Similarity=0.121 Sum_probs=244.8
Q ss_pred eeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHH
Q 037063 112 YVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDF 191 (588)
Q Consensus 112 ~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~ 191 (588)
.+|+++.|..++|+.+++++.+.+.. +.|+++. .|. .. + +.....+.++++|+.++++
T Consensus 3 ~~~~~~~g~~~~p~~v~~a~~~~~~~--~~~~~~~----------~~~-------~~-~--~~~~~~~~~~~l~~~la~~ 60 (360)
T 1w23_A 3 QVFNFNAGPSALPKPALERAQKELLN--FNDTQMS----------VME-------LS-H--RSQSYEEVHEQAQNLLREL 60 (360)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSS--STTSSSC----------GGG-------SC-T--TSHHHHHHHHHHHHHHHHH
T ss_pred ceEeecCCCcCCCHHHHHHHHHHhhh--hcccccc----------ccc-------cC-C--CCHHHHHHHHHHHHHHHHH
Confidence 57999999999999999998776632 2343210 000 00 0 0011256788999999999
Q ss_pred hCCCCCCceEEEecCH-HHHHHHHHHhCCCCC---CCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHH
Q 037063 192 MNISEDDYTLVFTANQ-SSAFKLLAESYPFYS---NPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGK 267 (588)
Q Consensus 192 lga~~~e~~vvft~g~-T~al~lv~~s~~~~~---gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~ 267 (588)
+|++ +.++|+||+|+ |+|+.+++.++ ..+ |+.|++.... +.. ...++..| +++.++++.+++.+|+++
T Consensus 61 ~g~~-~~~~v~~~~g~gt~al~~~~~~l-~~~~~~g~~vi~~~~~----~~~-~~~~~~~g-~~~~v~~~~~~~~~d~~~ 132 (360)
T 1w23_A 61 LQIP-NDYQILFLQGGASLQFTMLPMNL-LTKGTIGNYVLTGSWS----EKA-LKEAKLLG-ETHIAASTKANSYQSIPD 132 (360)
T ss_dssp HTCC-TTEEEEEESSHHHHHHHHHHHHH-CCTTCEEEEEECSHHH----HHH-HHHHHTTS-EEEEEEECGGGTSCSCCC
T ss_pred hCCC-CCceEEEECCcchHHHHHHHHHh-cCCCCcccEEEecchh----HHH-HHHHHHhC-CeEEeecccccCcCCccc
Confidence 9996 33469999999 99999999888 554 4444433211 111 23456779 999999873356688888
Q ss_pred HHH-HHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCc
Q 037063 268 LMK-KIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYK 346 (588)
Q Consensus 268 l~~-~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K 346 (588)
|++ +++ +++++|++++++|+||.++| +| ++++|++||+|+++..+ ..++++.. .|++++|+||
T Consensus 133 l~~~~i~--------~~~k~v~~~~~~nptG~~~~--~i--~~~~~~~li~D~a~~~~--~~~~~~~~--~di~~~s~sK 196 (360)
T 1w23_A 133 FSEFQLN--------ENDAYLHITSNNTIYGTQYQ--NF--PEINHAPLIADMSSDIL--SRPLKVNQ--FGMIYAGAQK 196 (360)
T ss_dssp GGGCCCC--------TTEEEEEEESEETTTTEECS--SC--CCCCSSCEEEECTTTTT--SSCCCGGG--CSEEEEETTT
T ss_pred hHhhccC--------CCCCEEEEeCCCCCcceecc--cc--cccCCceEEEechhhcC--CCCcCccc--CCEEEEEccc
Confidence 887 776 78999999999999999998 55 22899999999998876 23344444 3899999999
Q ss_pred cCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHh
Q 037063 347 IFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL 426 (588)
Q Consensus 347 ~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~ 426 (588)
++| |.|+|+++++++.++.+.+.. + +..... .... ..+ ..||++..++ +++..+++++.+.
T Consensus 197 ~~~--~~G~G~~~~~~~~~~~~~~~~-~--~~~~~~-------~~~~---~~~-~~~~~~~~~~---~~~~~al~~~~~~ 257 (360)
T 1w23_A 197 NLG--PSGVTVVIVKKDLLNTKVEQV-P--TMLQYA-------THIK---SDS-LYNTPPTFSI---YMLRNVLDWIKDL 257 (360)
T ss_dssp TTS--CTTCEEEEEEHHHHCSCCTTC-C--GGGCHH-------HHHH---TTT-CSSCCCHHHH---HHHHHHHHHHHHT
T ss_pred ccC--CCCcEEEEEcHHHHhhcccCC-c--chhhhh-------hhhh---ccC-CCCCCCHHHH---HHHHHHHHHHHHh
Confidence 999 779999999998887776543 2 110000 0000 022 4567777664 6777889888776
Q ss_pred -CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCCCCccc-EEEEEeecCCCCCcCHHHHHHHHHhCCcE
Q 037063 427 -GLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVMFDRGP-SLAFNVFDWNGTRIDPALVQKLADRHNIS 503 (588)
Q Consensus 427 -G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~~~rg~-iv~f~~~~~~g~~i~~~~v~~~l~~~gI~ 503 (588)
+++++.++.+.+++++.+.|.++ +++ .++.+. ..+++ ++.|.+.+. .+...+.+.|.++||.
T Consensus 258 ~~~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~ 322 (360)
T 1w23_A 258 GGAEAIAKQNEEKAKIIYDTIDES---------NGFYVGHAEK--GSRSLMNVTFNLRNE----ELNQQFLAKAKEQGFV 322 (360)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTT---------TTSSEESSCG--GGBCSSEEEEECSSH----HHHHHHHHHHHHTTEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHc---------cCcccccCCc--hhccCcEEEEEcCCC----ccHHHHHHHHHHCCee
Confidence 58999999999999999999985 322 333211 12344 888877531 2244566667789999
Q ss_pred eccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 504 LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 504 v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
++.|... .+ .||+|++.+++.||++++++.|++++++
T Consensus 323 ~~~~~~~--------------------------~~--~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 323 GLNGHRS--------------------------VG--GCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp SCBCCTT--------------------------TC--SEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred eecCCCC--------------------------CC--eEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 8766311 12 7999999999999999999999988653
No 36
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.96 E-value=3.8e-27 Score=248.45 Aligned_cols=333 Identities=11% Similarity=-0.032 Sum_probs=242.3
Q ss_pred eeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHHH
Q 037063 112 YVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMDF 191 (588)
Q Consensus 112 ~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~~ 191 (588)
..||.++...+ ++.+++++.+.+.. ..+++ .. +. ...+++++++++++++
T Consensus 32 ~~~~~~~~~~~-~~~v~~a~~~~~~~-~~~~~------------------------~~---~~-~~~~~~~~l~~~la~~ 81 (397)
T 3f9t_A 32 GNIFGSMCSNV-LPITRKIVDIFLET-NLGDP------------------------GL---FK-GTKLLEEKAVALLGSL 81 (397)
T ss_dssp TCBCSCSCCCC-CTHHHHHHHHHTTC-CTTSG------------------------GG---BH-HHHHHHHHHHHHHHHH
T ss_pred CCeEEEecCCC-cHHHHHHHHHHHhh-cCCCc------------------------cc---Ch-hHHHHHHHHHHHHHHH
Confidence 36899886555 45678877655532 12222 00 00 1267888999999999
Q ss_pred hCCCCCCceEEEecCHHHHHHHHHHhCCCC-------------CCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 192 MNISEDDYTLVFTANQSSAFKLLAESYPFY-------------SNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 192 lga~~~e~~vvft~g~T~al~lv~~s~~~~-------------~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
+|+++++ |+||+|+|+|+.+++.++ .. +||+|++ ...|++ . ...++..|++++.++++
T Consensus 82 ~~~~~~~--i~~~~ggt~a~~~~~~~~-~~~~~~~~~~~~~~~~gd~vl~~~~~~~~-~----~~~~~~~g~~~~~v~~~ 153 (397)
T 3f9t_A 82 LNNKDAY--GHIVSGGTEANLMALRCI-KNIWREKRRKGLSKNEHPKIIVPITAHFS-F----EKGREMMDLEYIYAPIK 153 (397)
T ss_dssp TTCTTCE--EEEESCHHHHHHHHHHHH-HHHHHHHHHTTCCCCSSCEEEEETTCCTH-H----HHHHHHHTCEEEEECBC
T ss_pred hCCCCCC--EEEecCcHHHHHHHHHHH-HHHHHhhhhhcccCCCCeEEEECCcchhH-H----HHHHHHcCceeEEEeeC
Confidence 9997654 999999999999999887 44 3888765 445553 2 34455679999999998
Q ss_pred CCCCccCHHHHHHHHhhhccccCCC-cceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC---CCC-----
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKK-KRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS---KDM----- 327 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~-~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~---~d~----- 327 (588)
+++.+|+++|+++|+ + ++++|++++++|+||.+.|+++| ++|+++|+++|+|+++... ..-
T Consensus 154 -~~~~~d~~~l~~~i~--------~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~ 224 (397)
T 3f9t_A 154 -EDYTIDEKFVKDAVE--------DYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKK 224 (397)
T ss_dssp -TTSSBCHHHHHHHHH--------HSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCC
T ss_pred -CCCcCCHHHHHHHHh--------hcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhccccccc
Confidence 678899999999998 4 79999999999999999999999 9999999999999997642 100
Q ss_pred ----CCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcch-hcc---cCCCCCCCceEeeecCCCccccccccccccc
Q 037063 328 ----DTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSA-SVL---SGSTSSVSTIMGIEPSFSEIIELETLDESSQ 399 (588)
Q Consensus 328 ----~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~-~~l---~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f 399 (588)
.++++.. ++|++++|+||+++. |.++|+++++++.+ +.+ .+...++ +. ..
T Consensus 225 ~~~~~~~~~~~-~~~~~~~s~~K~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~-------------------~~ 282 (397)
T 3f9t_A 225 KGVNYKFDFSL-GVDSITIDPHKMGHC-PIPSGGILFKDIGYKRYLDVDAPYLTET-RQ-------------------AT 282 (397)
T ss_dssp TTCCCCCSGGG-TCSEEECCTTTTTCC-CSSCEEEEESSGGGGGGTCEECTTSSSS-EE-------------------CS
T ss_pred ccccccccccc-cCCeEEEccccccCC-CCCceEEEEeCHHHHHhhccCCccccCC-Cc-------------------cc
Confidence 1334444 689999999997753 77899999987643 333 2222221 00 00
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEE
Q 037063 400 SKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFN 479 (588)
Q Consensus 400 ~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~ 479 (588)
..||.+.... .++.++++.+...+++++.++.+.+++++.+.|.++ +++++.+ ..++++.|.
T Consensus 283 -~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~----~~~~~~~~~ 344 (397)
T 3f9t_A 283 -ILGTRVGFGG---ACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN----------NFKPVIE----PILNIVAIE 344 (397)
T ss_dssp -SCSSCCSHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------TCCBSSC----CSSSEEEEE
T ss_pred -cccccccchH---HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC----------CCEEEcC----CCccEEEEE
Confidence 2344443333 455677777777678899999999999999999985 2333333 346777776
Q ss_pred eecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHH
Q 037063 480 VFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLW 559 (588)
Q Consensus 480 ~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li 559 (588)
+.+ ...+.+.|.++||.++.|.. . .+||++++.+++.||+++++
T Consensus 345 ~~~-------~~~~~~~l~~~gi~v~~~~~---------------------------~--~~~Ri~~~~~~~~e~i~~~~ 388 (397)
T 3f9t_A 345 DED-------YKEVCKKLRDRGIYVSVCNC---------------------------V--KALRIVVMPHIKREHIDNFI 388 (397)
T ss_dssp CTT-------HHHHHHHHHHTTCBCEECSS---------------------------S--SEEEEECCTTCCHHHHHHHH
T ss_pred eCC-------HHHHHHHHHhCCeEEeccCC---------------------------C--CEEEEEEcCCCCHHHHHHHH
Confidence 643 56677777788999887621 1 28999999999999999999
Q ss_pred HHHHHhhh
Q 037063 560 AFVSRFLD 567 (588)
Q Consensus 560 ~~l~~~l~ 567 (588)
+.|+++++
T Consensus 389 ~~l~~~l~ 396 (397)
T 3f9t_A 389 EILNSIKR 396 (397)
T ss_dssp HHHHHHC-
T ss_pred HHHHHhhC
Confidence 99998775
No 37
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.96 E-value=3.2e-26 Score=247.72 Aligned_cols=330 Identities=10% Similarity=-0.042 Sum_probs=236.3
Q ss_pred hHHHHHHHHHHHHHhCCCCCC---ceEEEecCHHHHHHHHHHhCCCC--------CC-----CeEEEcCCCchhHHHHHH
Q 037063 178 SELESKIRKRIMDFMNISEDD---YTLVFTANQSSAFKLLAESYPFY--------SN-----PRLLTVYDHENEAAALMI 241 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e---~~vvft~g~T~al~lv~~s~~~~--------~g-----d~ll~~~e~~s~~~~~~~ 241 (588)
.++++++++.+++++|+++++ ..+++|+|+|+|+.+++.++ .. +| ++|+++. .|. ++ .
T Consensus 80 ~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~-~~~~~~~~~~~G~~~~~~~vi~~~-~h~-~~---~ 153 (452)
T 2dgk_A 80 AAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAM-KWRWRKRMEAAGKPTDKPNLVCGP-VQI-CW---H 153 (452)
T ss_dssp HHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHH-HHHHHHHHHHTTCCCSCCEEEESS-CCH-HH---H
T ss_pred HHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHH-HHHHHHHHHhcCCCCCCcEEEECC-CcH-HH---H
Confidence 678899999999999997542 25999999999999887765 21 44 4666555 443 22 4
Q ss_pred HHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc------CcE
Q 037063 242 ESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK------GWH 314 (588)
Q Consensus 242 ~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~------g~~ 314 (588)
..++..|++++.+++++.++.+|+++|+++|+ ++|++|++++++|+||.+.|+++| ++|+++ |++
T Consensus 154 ~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~--------~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~ 225 (452)
T 2dgk_A 154 KFARYWDVELREIPMRPGQLFMDPKRMIEACD--------ENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDID 225 (452)
T ss_dssp HHHHHTTCEEEECCCBTTBCSCCHHHHHHHCC--------TTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHcCceEEEEecCCCCCeECHHHHHHHHh--------hCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCc
Confidence 55677899999999984378999999999998 679999999999999999999999 999995 999
Q ss_pred EEEeCCCcCCC----C-CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCc-ch-hccc--CCCCCCCceEeeecCC
Q 037063 315 VLLDATALGSK----D-MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKS-SA-SVLS--GSTSSVSTIMGIEPSF 385 (588)
Q Consensus 315 vvvDaa~~~~~----d-~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~-~~-~~l~--~~~~g~~g~v~~~~~~ 385 (588)
++||+++.... . ...+++...++|++++++||+++. |.|+|+++++++ .+ +.+. +.+.++ .+.
T Consensus 226 l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~~------ 297 (452)
T 2dgk_A 226 MHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLA-PLGCGWVIWRDEEALPQELVFNVDYLGG-QIG------ 297 (452)
T ss_dssp EEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCC-CSSCEEEEESSGGGSCGGGCEEECCTTC-CEE------
T ss_pred EEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCC-CCCeEEEEEcCHHHHHHHhccCccccCC-CCC------
Confidence 99999976531 0 112344444699999999996643 889999999875 33 3331 222221 110
Q ss_pred CcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeC
Q 037063 386 SEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYG 465 (588)
Q Consensus 386 ~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~ 465 (588)
.+...|+.+.... .++..++..+...|++++.++...+++++.+.|.++ ++++++.
T Consensus 298 ------------~~~~~~~r~~~~~---~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~---------~~~~~~~ 353 (452)
T 2dgk_A 298 ------------TFAINFSRPAGQV---IAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKL---------GPYEFIC 353 (452)
T ss_dssp ------------ECCSCCSCBCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---------SSEEEEE
T ss_pred ------------CcccCCCChhHHH---HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhC---------CCeEEec
Confidence 0001334444332 455567777666678999999999999999999984 5688876
Q ss_pred CCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEe
Q 037063 466 PKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAA 545 (588)
Q Consensus 466 p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvS 545 (588)
|..+....++++|.+.+..+..++...+.+.|.+.||.++.. +.+.. ..+..++|+|
T Consensus 354 ~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~--~~~~~---------------------~~~~~~lRis 410 (452)
T 2dgk_A 354 TGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAF--TLGGE---------------------ATDIVVMRIM 410 (452)
T ss_dssp ECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEE--ECSTT---------------------CTTCEEEEEE
T ss_pred CCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeeeee--eCCcc---------------------cCCeEEEEEE
Confidence 532223568999998653222245577888888889987642 11100 0223489999
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhhhhcccccc
Q 037063 546 LGCLTNFEDTYRLWAFVSRFLDADFVEKERW 576 (588)
Q Consensus 546 lg~~~t~eDv~~li~~l~~~l~~~~~~~~~~ 576 (588)
++.++|.|||+++++.|++.++..--.++.|
T Consensus 411 ~~~~~t~e~id~li~~l~~~~~~~~~~~~~~ 441 (452)
T 2dgk_A 411 CRRGFEMDFAELLLEDYKASLKYLSDHPKLQ 441 (452)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHCGGGT
T ss_pred ecCCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999876543333444
No 38
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.95 E-value=1.4e-26 Score=246.00 Aligned_cols=344 Identities=13% Similarity=0.089 Sum_probs=239.0
Q ss_pred CeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHH
Q 037063 111 NYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMD 190 (588)
Q Consensus 111 ~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~ 190 (588)
..+|++++|.+++|+.+++++.+. +++ . . ...+ ++....+.++++|+.+++
T Consensus 39 ~~~~~~~~~~~~~~~~v~~a~~~~------~~~-~------------~------~~~~----~~~~~~~~~~~~~~~la~ 89 (398)
T 2fyf_A 39 PRDGRFGSGPSKVRLEQLQTLTTT------AAA-L------------F------GTSH----RQAPVKNLVGRVRSGLAE 89 (398)
T ss_dssp CSSCBCCSSSCCCCHHHHHGGGTT------TTT-T------------T------TSCT----TSHHHHHHHHHHHHHHHH
T ss_pred cCCccccCCCCCCCHHHHHHHhhc------CCC-c------------c------CcCc----CCHHHHHHHHHHHHHHHH
Confidence 457888899999999999987542 111 0 0 0000 001114678899999999
Q ss_pred HhCCCCCCceEEE-ecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhc--CCEEEEEeccCCCCccCHHH
Q 037063 191 FMNISEDDYTLVF-TANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKR--GARVSSAEFAWPNLRIHSGK 267 (588)
Q Consensus 191 ~lga~~~e~~vvf-t~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~--G~~v~~v~~~~~~~~i~~e~ 267 (588)
++|+++ +++|+| |+|+|+|+++++.++ +++| .+++....++ ..+ ...+... |++++.++++ . +.+...
T Consensus 90 ~~g~~~-~~~i~~~t~g~t~al~~~~~~l-~~~g-v~~v~~~~~~--~~~-~~~~~~~~~g~~~~~v~~~-~-g~~~~~- 160 (398)
T 2fyf_A 90 LFSLPD-GYEVILGNGGATAFWDAAAFGL-IDKR-SLHLTYGEFS--AKF-ASAVSKNPFVGEPIIITSD-P-GSAPEP- 160 (398)
T ss_dssp HTTCCT-TCEEEEEETCHHHHHHHHHHHT-CSSC-EEEEECSHHH--HHH-HHHHHHCTTSCCCEEEECC-T-TCCCCC-
T ss_pred HhCCCC-CceEEEeCCchhHHHHHHHHHh-cCCC-eEEEeCCHHH--HHH-HHHHHHhCCCCceEEEecC-C-CCCCCc-
Confidence 999973 245998 999999999999999 7886 2222333332 111 2234555 8899999886 2 322211
Q ss_pred HHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCc
Q 037063 268 LMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYK 346 (588)
Q Consensus 268 l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K 346 (588)
.++ +++++|++++++|+||.++|+++| ++ +|++||+|+++..+ ..++++.. +|++++|+||
T Consensus 161 ---~i~--------~~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~--~~~~~~~~--~di~~~s~sK 222 (398)
T 2fyf_A 161 ---QTD--------PSVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAG--GLPVDIAE--TDAYYFAPQK 222 (398)
T ss_dssp ---CCC--------TTCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTT--TSCCCGGG--CSEEEECTTS
T ss_pred ---ccc--------CCCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccC--CcccCccc--CcEEEEecCc
Confidence 133 679999999999999999999999 65 89999999998876 23344432 8999999999
Q ss_pred cCCCCCCceEEEEEeCcchhcccC---------CCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHH
Q 037063 347 IFGENPSGFGCLFVKKSSASVLSG---------STSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVEC 417 (588)
Q Consensus 347 ~~G~~P~G~G~L~v~~~~~~~l~~---------~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~ 417 (588)
++|. |.|+|++++++++++.++. .+..+ +... ..+. . .+ ..+|++..++ +++.
T Consensus 223 ~~~~-~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~--------~~~~-~---~~-~~~t~~~~~~---~a~~ 284 (398)
T 2fyf_A 223 NFAS-DGGLWLAIMSPAALSRIEAIAATGRWVPDFLSL-PIAV--------ENSL-K---NQ-TYNTPAIATL---ALLA 284 (398)
T ss_dssp TTCS-CSSEEEEEECHHHHHHHHHHHHTTCCCCGGGCH-HHHH--------HHHT-T---TC-CSSCCCHHHH---HHHH
T ss_pred ccCC-CCceEEEEECHHHHHHhhcccccCCCCCcEEeh-HHHh--------hhcc-c---CC-CCCCCCHHHH---HHHH
Confidence 9995 4479999999988776632 11110 1000 0000 0 01 3456666654 6777
Q ss_pred HHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc-EEEEEeecCCCCCcCHHHHHH
Q 037063 418 KGLDHADALG-LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP-SLAFNVFDWNGTRIDPALVQK 495 (588)
Q Consensus 418 ~aL~~l~~~G-~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~-iv~f~~~~~~g~~i~~~~v~~ 495 (588)
.+|+.+.+.| ++++.++.+++++++.+.|+++ ++++++.+.. ..+++ ++.|.+++ | ++...+.+
T Consensus 285 ~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~~~-~~~~~~~~~~~~~~--~--~~~~~l~~ 350 (398)
T 2fyf_A 285 EQIDWLVGNGGLDWAVKRTADSSQRLYSWAQER---------PYTTPFVTDP-GLRSQVVGTIDFVD--D--VDAGTVAK 350 (398)
T ss_dssp HHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHS---------TTEEESCCSG-GGBCSSEEEEEECT--T--SCHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHc---------CCceeccCCh-hhcCCcEEEEECCC--C--CCHHHHHH
Confidence 8999888777 8999999999999999999985 5688875211 12455 88888853 2 56777888
Q ss_pred HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 496 LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 496 ~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.|.++||.++.|... .+...||+|++.+++.||++++++.|++++++
T Consensus 351 ~L~~~gI~v~~g~~~--------------------------~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 351 ILRANGIVDTEPYRK--------------------------LGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp HHHHTTCBCCSCCTT--------------------------TCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHCCcEEecCccc--------------------------CCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 887789999876210 12238999999999999999999999988753
No 39
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.95 E-value=9.4e-26 Score=236.16 Aligned_cols=342 Identities=14% Similarity=0.131 Sum_probs=239.0
Q ss_pred CCCCCCchhHHHHHhhhccCCCCCCeeeecCCCCCC-CCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCccccccccc
Q 037063 87 FPQYLQTDQADRIRAQDYFHLSLNNYVCFDYIGHGL-FSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSV 165 (588)
Q Consensus 87 ~p~y~~~~~~~~iR~~~f~~l~~~~~vyLD~a~~gl-~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~ 165 (588)
.+.|.......++++ +|.. ++.++|+.+-..+ .|+.+++++.+.+.. ....|
T Consensus 13 ~~~~~~~~~~~~~~~-~~~~---~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~y~---------------------- 65 (363)
T 3ffh_A 13 LSSYKPGKREEEVMA-ELGL---TKITKLSSNENPLGTSKKVAAIQANSSVE-TEIYP---------------------- 65 (363)
T ss_dssp CCC----CHHHHHHH-TTTC---SCCEECSSCSCTTCCCHHHHHHHHTCBSC-CCBC-----------------------
T ss_pred CCCCCCCCCHHHHHH-hcCC---CceEEccCCCCCCCCCHHHHHHHHHHHHH-hhcCC----------------------
Confidence 445554455666665 3542 5788888875553 567788887554321 11111
Q ss_pred ccccccccCCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHH
Q 037063 166 NLNSWLQYGSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESS 244 (588)
Q Consensus 166 ~~~s~~~~g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a 244 (588)
.....++|+.+++++|+++++ |+||+|+|+|+.+++.++ +++||+|++ ...|++ . ...+
T Consensus 66 ------------~~~~~~lr~~la~~~~~~~~~--v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~-~----~~~~ 125 (363)
T 3ffh_A 66 ------------DGWASSLRKEVADFYQLEEEE--LIFTAGVDELIELLTRVL-LDTTTNTVMATPTFVQ-Y----RQNA 125 (363)
T ss_dssp ---------------CHHHHHHHHHHHTCCGGG--EEEESSHHHHHHHHHHHH-CSTTCEEEEEESSCHH-H----HHHH
T ss_pred ------------CcchHHHHHHHHHHhCCChhh--EEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCChHH-H----HHHH
Confidence 122468999999999997665 999999999999999999 899999764 444443 2 3455
Q ss_pred HhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc--CcEEEEeCCC
Q 037063 245 KKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK--GWHVLLDATA 321 (588)
Q Consensus 245 ~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~--g~~vvvDaa~ 321 (588)
+..|++++.++.+ +++.+|+++|+++++ +++++|++++++|+||..+|+++| ++++.. |+++|+|+++
T Consensus 126 ~~~g~~~~~v~~~-~~~~~d~~~l~~~i~--------~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~ 196 (363)
T 3ffh_A 126 LIEGAEVREIPLL-QDGEHDLEGMLNAID--------EKTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAY 196 (363)
T ss_dssp HHHTCEEEEEECC-TTSCCCHHHHHHHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTT
T ss_pred HHcCCEEEEecCC-CCCCcCHHHHHHhcc--------cCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCch
Confidence 6789999999998 478899999999997 689999999999999999999999 888877 9999999997
Q ss_pred cCCC---CCCCCCC-CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccccc
Q 037063 322 LGSK---DMDTLGL-SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDES 397 (588)
Q Consensus 322 ~~~~---d~~~l~l-~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~ 397 (588)
.... ....+.. .....++++.|++|.+|.+..++|++++++++++.+......
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~----------------------- 253 (363)
T 3ffh_A 197 IEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVRPP----------------------- 253 (363)
T ss_dssp GGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHTCCS-----------------------
T ss_pred HhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHHHHHHhCCC-----------------------
Confidence 7210 0011111 112246888999999983233459999988887766533211
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE
Q 037063 398 SQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA 477 (588)
Q Consensus 398 ~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~ 477 (588)
.+.+.... +++..+|+..+ .++++.++.+.+++++.+.|.++ ++++++.+ .+.++.
T Consensus 254 -----~~~~~~~~---~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~l~~~---------~g~~~~~~-----~~~~~~ 309 (363)
T 3ffh_A 254 -----FNTTSIGQ---KLAIEAIKDQA--FIGECRTSNANGIKQYEAFAKRF---------EKVKLYPA-----NGNFVL 309 (363)
T ss_dssp -----CCCBHHHH---HHHHHHHHCHH--HHHHHHHHHHHHHHHHHHHHHHC---------TTCEECCC-----CSSEEE
T ss_pred -----CCCCHHHH---HHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHhhC---------CCceECCC-----CCeEEE
Confidence 11222221 34445555322 26788899999999999999883 35666532 456776
Q ss_pred EEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHH
Q 037063 478 FNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYR 557 (588)
Q Consensus 478 f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~ 557 (588)
+.+.. +...+.+.|.++||.++.|..+. ..++||+|++ +.+|+++
T Consensus 310 ~~~~~------~~~~~~~~l~~~gi~v~~g~~~~--------------------------~~~~iRis~~---~~~~i~~ 354 (363)
T 3ffh_A 310 IDLGI------EAGTIFSYLEKNGYITRSGAALG--------------------------FPTAVRITIG---KEEDNSA 354 (363)
T ss_dssp EECSS------CHHHHHHHHHHTTEECEETTTTT--------------------------CTTEEEEECC---CHHHHHH
T ss_pred EECCC------CHHHHHHHHHHCCeEEEeCccCC--------------------------CCCeEEEECC---CHHHHHH
Confidence 66653 36777777778999999885431 0129999987 8999999
Q ss_pred HHHHHHHhh
Q 037063 558 LWAFVSRFL 566 (588)
Q Consensus 558 li~~l~~~l 566 (588)
+++.|++++
T Consensus 355 ~~~~l~~~l 363 (363)
T 3ffh_A 355 VIALLEKLL 363 (363)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998764
No 40
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.95 E-value=5.3e-27 Score=252.88 Aligned_cols=316 Identities=16% Similarity=0.087 Sum_probs=220.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++++++++.+++++|+++++ ++++.|+|.++..+..++.+++||+|+ ....|++ ....+..+++..|++++.++.
T Consensus 107 ~~~~~~~~~~la~~~g~~~~~--i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s-~~~~~~~~a~~~G~~v~~v~~ 183 (438)
T 1wyu_A 107 LQATFEYQTMIAELAGLEIAN--ASMYDGATALAEGVLLALRETGRMGVLVSQGVHPE-YRAVLRAYLEAVGAKLLTLPL 183 (438)
T ss_dssp HHHHHHHHHHHHHHHTSSEEC--SCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHH-HHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCccc--eEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHh-HHHHHHHHHHHCCCEEEEEcC
Confidence 578899999999999997654 899999994444443333357899966 5556665 333445677888999999987
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCC-CcCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDAT-ALGSKDMDTLGLSL 334 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa-~~~~~d~~~l~l~~ 334 (588)
+++.+|+++ |+ ++|++|+++++ |+||.+.|+++| ++|+++|+++++|+. +..+. . ... ..
T Consensus 184 --~~~~~d~~~----i~--------~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~-~-~~~-~~ 245 (438)
T 1wyu_A 184 --EGGRTPLPE----VG--------EEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGV-L-KPP-GA 245 (438)
T ss_dssp --BTTBCCCCC----CC--------TTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGT-B-CCH-HH
T ss_pred --cCCccCHHH----hC--------CCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccC-c-CCC-cc
Confidence 346777766 55 67999999998 999999999999 999999999998765 44441 1 111 23
Q ss_pred CCCcEEEeccCc-----cCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccc--cccc-ccccccCCCCC
Q 037063 335 FKPDFLICSFYK-----IFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIEL--ETLD-ESSQSKFPESS 406 (588)
Q Consensus 335 ~~~D~vv~S~~K-----~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~--~~~~-~~~f~e~GT~~ 406 (588)
+++|++++|.|| ++|. | |+|++++++++++.+.....| +.+.. .... ...+ ..+. ..++ +.||++
T Consensus 246 ~g~D~~~~s~kk~~~~~~~~G-p-~~G~l~~~~~~~~~l~~~~~g--~~~~~-~~~~-~~~~~l~~~~~~~r~-~~~t~~ 318 (438)
T 1wyu_A 246 YGADIAVGDGQSLGLPMGFGG-P-HFGFLATKKAFVRQLPGRLVS--ETVDV-EGRR-GFILTLQAREQYIRR-AKAKSN 318 (438)
T ss_dssp HTCSEEEEECTTTTCCCGGGC-S-CCEEEEECGGGGGGCCSCCEE--EEEBT-TSCE-EEEECCGGGSHHHHG-GGSSCC
T ss_pred CCCCEEEECCcccCCCccCCC-C-CeeEEEEcHHHHHhCCCceec--ccccc-CCCc-ceeeeccccccccch-hcccCC
Confidence 448999999777 3442 6 899999999988777654433 11110 0000 0001 0000 0134 678888
Q ss_pred ccchhhHHHHHHH--HHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCC
Q 037063 407 ISGVSSKLVECKG--LDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWN 484 (588)
Q Consensus 407 ~~~~~~~~al~~a--L~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~ 484 (588)
+.....++++.++ +..+...|++++.++...+++++.+.|+++ ++++++.+. ..-.++.|.+.
T Consensus 319 ~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~~---~~~~~~~~~~~--- 383 (438)
T 1wyu_A 319 ITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEV---------PGVRPFTPK---PFFNEFALALP--- 383 (438)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS---------TTCEECSCS---SBCSEEEEECS---
T ss_pred ccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcC---------CCeEECCCC---CeEEEEEEeCC---
Confidence 8433223455555 666766678999999999999999999984 678887652 12234445432
Q ss_pred CCCcCHHHHHHHHHhCCcEe--ccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHH
Q 037063 485 GTRIDPALVQKLADRHNISL--SCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 485 g~~i~~~~v~~~l~~~gI~v--~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l 562 (588)
.+...+.+.|.++||.+ +.|.+|. .+.||+|++.++|.+||+++++.|
T Consensus 384 ---~~~~~~~~~L~~~gi~v~~~~~~~~~---------------------------~~~lRis~~~~~t~edi~~~~~~l 433 (438)
T 1wyu_A 384 ---KDPEAVRRALAERGFHGATPVPREYG---------------------------ENLALFAATELHEEEDLLALREAL 433 (438)
T ss_dssp ---SCHHHHHHHHHHTTCCCCEECCTTSC---------------------------SSEEEEECCTTCCHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHCCceeccccccccC---------------------------CCeEEEEecccCCHHHHHHHHHHH
Confidence 34677877777889998 5554431 128999999999999999999999
Q ss_pred HHhh
Q 037063 563 SRFL 566 (588)
Q Consensus 563 ~~~l 566 (588)
++++
T Consensus 434 ~~~l 437 (438)
T 1wyu_A 434 KEVL 437 (438)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8864
No 41
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.95 E-value=7.6e-26 Score=247.85 Aligned_cols=386 Identities=12% Similarity=0.050 Sum_probs=249.4
Q ss_pred CCCCCc--hhHHHHHhhhccCC-CCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccc
Q 037063 88 PQYLQT--DQADRIRAQDYFHL-SLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRS 164 (588)
Q Consensus 88 p~y~~~--~~~~~iR~~~f~~l-~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~ 164 (588)
|+-+.. ..++.+++.-.+.. ......||||.++++.+..+++++..... |++. ..|+
T Consensus 74 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~v~~~~~~~~~-----n~~~-----~~~~---------- 133 (497)
T 2qma_A 74 DNKNAPLKSVIDDVAELVAKNAIFTQHPDCIAHLHTPPLMPAVAAEAMIAAL-----NQSM-----DSWD---------- 133 (497)
T ss_dssp SSCCCCHHHHHHHHHHHTTTTSCCTTSTTBCSSSCCCCBHHHHHHHHHHHHH-----CCCT-----TCGG----------
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeCCCCCcHHHHHHHHHHHhh-----cccc-----cchh----------
Confidence 555442 34566776433432 11466899999999999999998755432 2200 0000
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC---C---------CC------CC-e
Q 037063 165 VNLNSWLQYGSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP---F---------YS------NP-R 225 (588)
Q Consensus 165 ~~~~s~~~~g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~---~---------~~------gd-~ 225 (588)
.+ ....++++++++++++++|+++. ..++||+|+|+|+.+++.+.. + ++ |+ +
T Consensus 134 ---~~-----~~~~~le~~~~~~la~~~g~~~~-~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~ 204 (497)
T 2qma_A 134 ---QA-----SSATYVEQKVVNWLCDKYDLSEK-ADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLR 204 (497)
T ss_dssp ---GC-----HHHHHHHHHHHHHHHHHTTCCTT-CEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEE
T ss_pred ---hC-----hHHHHHHHHHHHHHHHHhCCCCC-CCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeE
Confidence 00 01267788889999999999642 469999999999988777621 1 12 45 5
Q ss_pred EEE-cCCCchhHHHHHHHHHHhcCC---EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC
Q 037063 226 LLT-VYDHENEAAALMIESSKKRGA---RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS 301 (588)
Q Consensus 226 ll~-~~e~~s~~~~~~~~~a~~~G~---~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p 301 (588)
|++ ...|++ . ...++..|. +++.+|++ +++.+|+++|+++|++. .....++.+|++++.+|+||.+.|
T Consensus 205 v~~s~~~h~s-~----~~~~~~~g~g~~~v~~v~~~-~~~~~d~~~L~~~i~~~--~~~~~~~~~vv~~~~~~~tG~~~~ 276 (497)
T 2qma_A 205 IVCSKKSHFT-V----QKSASWMGLGEKAVMTVDAN-ADGTMDITKLDEVIAQA--KAEGLIPFAIVGTAGTTDHGAIDD 276 (497)
T ss_dssp EEEETTSCTH-H----HHHHHHTTSCGGGEEEECBC-TTSSBCGGGHHHHHHHH--HHTTCEEEEEEEEBSCTTTCCBCC
T ss_pred EEECCCchHH-H----HHHHHHcCCCcccEEEEecC-CCCcCCHHHHHHHHHHH--HHCCCcceEEEEcCCCCCCCCCCC
Confidence 554 456664 2 233444554 89999998 67899999999999721 011112448999999999999999
Q ss_pred HHHH-HHHHHcCcEEEEeCCCcCCCCCCCCC--CCCC-CCcEEEeccCccCCCCCCceEEEEEeCcc-hhcccCC--CCC
Q 037063 302 YMWM-SVAAEKGWHVLLDATALGSKDMDTLG--LSLF-KPDFLICSFYKIFGENPSGFGCLFVKKSS-ASVLSGS--TSS 374 (588)
Q Consensus 302 l~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~--l~~~-~~D~vv~S~~K~~G~~P~G~G~L~v~~~~-~~~l~~~--~~g 374 (588)
+++| ++|+++|+++|||+++..+.-..++. +... .+|++++|+||+++. |.|+|+++++++. ++.+... +..
T Consensus 277 l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~-p~~~G~l~~~~~~~~~~~~~~~~yl~ 355 (497)
T 2qma_A 277 LDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQ-TISCGALLVNDKSNFKFLLHHADYLN 355 (497)
T ss_dssp HHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCC-CSSCEEEEESCGGGGGGGCC------
T ss_pred HHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCC-CcceEEEEEeCHHHHHHhcCCchhcC
Confidence 9999 99999999999999987652111111 1222 589999999997775 8899999998764 3333211 100
Q ss_pred CCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCC
Q 037063 375 VSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHS 454 (588)
Q Consensus 375 ~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~ 454 (588)
..+.. .+. . .. +.-.++..+.+ .++..+++.+...|++.+.++...+++++.+.|.++
T Consensus 356 ~~~~~--~~~---~--~~------~~~~~~r~~~a----l~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~----- 413 (497)
T 2qma_A 356 REHDE--LPN---L--VD------KSIATTKRFDA----LKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTN----- 413 (497)
T ss_dssp ---------------------------CCSCCCTH----HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred Ccccc--CCC---c--cc------cCCCCCCchhH----HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhC-----
Confidence 00000 000 0 00 00012222222 234456666655567889999999999999999984
Q ss_pred CCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcC--HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCC
Q 037063 455 ETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRID--PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGT 532 (588)
Q Consensus 455 ~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~--~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~ 532 (588)
++++++.+ .+++++.|.+.+... ..+ ...+.+.+.+.|+.+..+..
T Consensus 414 ----~~~~~~~~----~~~~~v~f~~~~~~~-~~~~l~~~l~~~l~~~G~~~~~~~~----------------------- 461 (497)
T 2qma_A 414 ----DQFELLAE----PSLSTVLFRATHETA-DLDELNKALRLEALTRGIAVLGETI----------------------- 461 (497)
T ss_dssp ----TTEEECSC----CSSSEEEEEECCSSS-CHHHHHHHHHHHHHHHTSCBCEEEE-----------------------
T ss_pred ----CCeEEEcC----CCceEEEEEEcCCcc-CHHHHHHHHHHHHHhCCCEEEEeeE-----------------------
Confidence 67888765 346899998865211 000 12344555666776643211
Q ss_pred CCCcCCccEEEEec-CCCCCHHHHHHHHHHHHHhhhh
Q 037063 533 NETRSGVSVVTAAL-GCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 533 ~~~~~g~~~vRvSl-g~~~t~eDv~~li~~l~~~l~~ 568 (588)
..|..++|+|+ ++++|.+||+++++.|++++++
T Consensus 462 ---~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 462 ---VDGKTALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp ---ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 02334899998 8999999999999999988654
No 42
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.95 E-value=8.9e-26 Score=248.44 Aligned_cols=363 Identities=11% Similarity=-0.005 Sum_probs=235.1
Q ss_pred CeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHH
Q 037063 111 NYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMD 190 (588)
Q Consensus 111 ~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~ 190 (588)
...||||..+++.|..++..+... +.|+++. .|+ .+. ...+++.++++++++
T Consensus 108 ~p~~~~~~~~~~~~~~~~~~~l~~-----~~n~~~~-----~~~-------------~s~-----~~~~le~~~~~~la~ 159 (515)
T 2jis_A 108 HPRFFNQLFSGLDPHALAGRIITE-----SLNTSQY-----TYE-------------IAP-----VFVLMEEEVLRKLRA 159 (515)
T ss_dssp STTEESSSCCCCCHHHHHHHHHHH-----HHCCCTT-----CTT-------------TCH-----HHHHHHHHHHHHHHH
T ss_pred CCCeEEEeeCCCCHHHHHHHHHHH-----HhccCCC-----chh-------------hch-----HHHHHHHHHHHHHHH
Confidence 457999999999998888755332 2233210 010 011 126788899999999
Q ss_pred HhCCCCCCceEEEecCHHHHHHHHHHhCC------CC-CCC------eEE-EcCCCchhHHHHHHHHHHhcCC---EEEE
Q 037063 191 FMNISEDDYTLVFTANQSSAFKLLAESYP------FY-SNP------RLL-TVYDHENEAAALMIESSKKRGA---RVSS 253 (588)
Q Consensus 191 ~lga~~~e~~vvft~g~T~al~lv~~s~~------~~-~gd------~ll-~~~e~~s~~~~~~~~~a~~~G~---~v~~ 253 (588)
++|++++ .++||+|+|+|+.+++.++. ++ +|+ +|+ +...|++ . ...++..|. +++.
T Consensus 160 l~g~~~~--~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s-~----~~~~~~~g~g~~~v~~ 232 (515)
T 2jis_A 160 LVGWSSG--DGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYS-I----QKGAAFLGLGTDSVRV 232 (515)
T ss_dssp HHTCSSC--EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH-H----HHHHHHTTSCGGGEEE
T ss_pred HhCCCCC--CeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHH-H----HHHHHHcCCCCCcEEE
Confidence 9999743 59999999999877766641 12 464 555 4556665 2 233445566 8999
Q ss_pred EeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCC-CCCC-
Q 037063 254 AEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKD-MDTL- 330 (588)
Q Consensus 254 v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d-~~~l- 330 (588)
+|.+ +++.+|+++|+++|++. +....++++|++++++|+||.+.|+++| ++|+++|+++|||+++..+.- ....
T Consensus 233 v~~~-~~~~~d~~~L~~~i~~~--~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~ 309 (515)
T 2jis_A 233 VKAD-ERGKMVPEDLERQIGMA--EAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHR 309 (515)
T ss_dssp ECBC-TTSCBCHHHHHHHHHHH--HHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTG
T ss_pred EecC-CCCcCCHHHHHHHHHHH--HhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhH
Confidence 9997 67899999999999731 1112368999999999999999999999 999999999999999777521 1111
Q ss_pred -CCCC-CCCcEEEeccCccCCCCCCceEEEEEeCc--chhcc----cCCCCCCCceEeeecCCCcccccccccccccccC
Q 037063 331 -GLSL-FKPDFLICSFYKIFGENPSGFGCLFVKKS--SASVL----SGSTSSVSTIMGIEPSFSEIIELETLDESSQSKF 402 (588)
Q Consensus 331 -~l~~-~~~D~vv~S~~K~~G~~P~G~G~L~v~~~--~~~~l----~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~ 402 (588)
.+.. .++|++++|+||++|. |.|+|+++++++ +++.+ .++..++ +... . . .+ +.
T Consensus 310 ~~~~g~~~aD~v~~s~hK~l~~-p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~-~~~~--~----~---------~~-~~ 371 (515)
T 2jis_A 310 HLLDGIQRADSVAWNPHKLLAA-GLQCSALLLQDTSNLLKRCHGSQASYLFQQ-DKFY--D----V---------AL-DT 371 (515)
T ss_dssp GGGTTGGGCSEEEECTTSTTCC-CSCCEEEEESCCSCHHHHHHCC----------CCS--C----G---------GG-CC
T ss_pred hhcCCCccCCEEEECcccccCC-CCCeeEEEEeChHHHHHHHhcCCchhccCC-cccc--c----c---------cC-CC
Confidence 1222 2589999999998875 889999999987 54432 2222221 1100 0 0 01 11
Q ss_pred CCCCccch--hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEe
Q 037063 403 PESSISGV--SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNV 480 (588)
Q Consensus 403 GT~~~~~~--~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~ 480 (588)
|+..+... .....+..++..+...|++++.++...+++++.+.|.++ ++++++++. ..++++|..
T Consensus 372 ~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~---------~g~~~~~~~----~~~~v~f~~ 438 (515)
T 2jis_A 372 GDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKR---------EGFELVMEP----EFVNVCFWF 438 (515)
T ss_dssp GGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---------TTEEESSCC----SSSEEEEEE
T ss_pred CCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC---------CCEEEeCCC----CeeEEEEEE
Confidence 11111000 000233445666666678999999999999999999984 689998762 356788876
Q ss_pred ecC--CC----CCcCH------HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCC-ccEEEEec-
Q 037063 481 FDW--NG----TRIDP------ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSG-VSVVTAAL- 546 (588)
Q Consensus 481 ~~~--~g----~~i~~------~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g-~~~vRvSl- 546 (588)
... .+ ..+.. ..+.+.+.+.|+....... ..+ ..+||+++
T Consensus 439 ~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~--------------------------~~~~~~~lRis~~ 492 (515)
T 2jis_A 439 VPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQP--------------------------HGTRGNFFRVVVA 492 (515)
T ss_dssp CCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEE--------------------------ETTEEEEEEEECC
T ss_pred eCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEE--------------------------ECCceEEEEEEeC
Confidence 421 11 00000 0133344445653211000 012 13899999
Q ss_pred CCCCCHHHHHHHHHHHHHhhhh
Q 037063 547 GCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 547 g~~~t~eDv~~li~~l~~~l~~ 568 (588)
++++|.+||+++++.|++++++
T Consensus 493 ~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 493 NSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp CTTCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHHHhh
Confidence 8999999999999999987653
No 43
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.95 E-value=2.9e-25 Score=243.52 Aligned_cols=317 Identities=13% Similarity=0.016 Sum_probs=232.6
Q ss_pred hHHHHHHHHHHHHHhCCC--CCC-ceEEEecCHHHHHHHHHHhCCCCC--------CC-----eEEEc-CCCchhHHHHH
Q 037063 178 SELESKIRKRIMDFMNIS--EDD-YTLVFTANQSSAFKLLAESYPFYS--------NP-----RLLTV-YDHENEAAALM 240 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~--~~e-~~vvft~g~T~al~lv~~s~~~~~--------gd-----~ll~~-~e~~s~~~~~~ 240 (588)
.++++++++++++++|++ +++ ...++|+|+|+|+.+++.++ ..+ |+ +|+++ ..|.+ +
T Consensus 94 ~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~-~~~~~~~~~~~G~~~~~~~vi~~~~~h~s--~--- 167 (502)
T 3hbx_A 94 TELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAF-KRKWQNKRKAEGKPVDKPNIVTGANVQVC--W--- 167 (502)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHH-HHHHHHHHHHTTCCCSCCEEEEETTCCHH--H---
T ss_pred HHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHH-HHHHhHHHHhcCCCCCCcEEEEcCCchHH--H---
Confidence 688889999999999997 433 23457999999999888776 222 65 66654 45543 2
Q ss_pred HHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc------Cc
Q 037063 241 IESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK------GW 313 (588)
Q Consensus 241 ~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~------g~ 313 (588)
...++..|++++.++++..++.+|+++|+++|+ ++|++|++++++|+||.+.|+++| ++|+++ |+
T Consensus 168 ~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~--------~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~ 239 (502)
T 3hbx_A 168 EKFARYFEVELKEVKLSEGYYVMDPQQAVDMVD--------ENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDT 239 (502)
T ss_dssp HHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCC--------TTEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHcCceeEEEecCCCcCcCCHHHHHHHHh--------hCCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCC
Confidence 456677899999999985458999999999998 689999999999999999999999 999999 99
Q ss_pred EEEEeCCCcCC-----CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcc-hh-cc--cCCCCCCCceEeeecC
Q 037063 314 HVLLDATALGS-----KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSS-AS-VL--SGSTSSVSTIMGIEPS 384 (588)
Q Consensus 314 ~vvvDaa~~~~-----~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~-~~-~l--~~~~~g~~g~v~~~~~ 384 (588)
+++||+|+... ....+.++...++|++++++||+++. |.|+|+++++++. +. .+ .+.+.++ ...
T Consensus 240 ~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~-p~g~G~~~~~~~~~l~~~~~~~~~yl~~-~~~----- 312 (502)
T 3hbx_A 240 PIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLV-YAGIGWVIWRNKEDLPEELIFHINYLGA-DQP----- 312 (502)
T ss_dssp CEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCC-CSSCEEEEESSGGGSCGGGCEEECSSSS-CEE-----
T ss_pred eEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCC-CCCeEEEEEeCHHHhhHHhccCcccccC-CCC-----
Confidence 99999998632 11123344445699999999997753 8999999998643 21 11 1222221 110
Q ss_pred CCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEe
Q 037063 385 FSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIY 464 (588)
Q Consensus 385 ~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~ 464 (588)
.|.-.++.+...+ +++..++..+...|+..+.++...+++++.+.|.++ ++++++
T Consensus 313 -------------~~~~~~sr~~~~~---~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~---------~~~~~~ 367 (502)
T 3hbx_A 313 -------------TFTLNFSKGSSQV---IAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKT---------ERFNIV 367 (502)
T ss_dssp -------------ECCSCCSCBSHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---------TCEEEC
T ss_pred -------------CccccCCchHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------CCEEEE
Confidence 0101233433332 556677887766678999999999999999999985 568888
Q ss_pred CCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEE
Q 037063 465 GPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTA 544 (588)
Q Consensus 465 ~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRv 544 (588)
.+. ...++++|.+.+.. .++...+.+.|.++||.++.... +. . ..+...+|+
T Consensus 368 ~~~---~~~~~v~f~~~~~~--~~~~~~l~~~L~~~Gi~v~~~~~--p~--------------~-------~~~~~~lRi 419 (502)
T 3hbx_A 368 SKD---EGVPLVAFSLKDSS--CHTEFEISDMLRRYGWIVPAYTM--PP--------------N-------AQHITVLRV 419 (502)
T ss_dssp SCS---SSSSEEEEEESSCS--SCCHHHHHHHHHTTTCBCCEEEC--CT--------------T-------CTTCEEEEE
T ss_pred eCC---CCceEEEEEecCCC--cCCHHHHHHHHHhCCcEEeeccC--Cc--------------c-------cCCceEEEE
Confidence 651 35689999987522 25666788888999998864211 00 0 123348999
Q ss_pred ecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 545 ALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 545 Slg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+++..+|.||+++|++.|++.++.
T Consensus 420 sv~~~~t~edid~li~~L~~~l~~ 443 (502)
T 3hbx_A 420 VIREDFSRTLAERLVIDIEKVMRE 443 (502)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988754
No 44
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.95 E-value=1.6e-25 Score=233.44 Aligned_cols=327 Identities=12% Similarity=0.101 Sum_probs=234.0
Q ss_pred CCeeeecCCCCCC-CCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGL-FSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRI 188 (588)
Q Consensus 110 ~~~vyLD~a~~gl-~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~i 188 (588)
++.+.|+.+...+ .|+.+++++.+.+.. ... |. .....++|+.+
T Consensus 16 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~-------------------------------y~---~~~~~~l~~~l 60 (354)
T 3ly1_A 16 DNPIRINFNENPLGMSPKAQAAARDAVVK-ANR-------------------------------YA---KNEILMLGNKL 60 (354)
T ss_dssp SSCEECSSCCCSSCCCHHHHHHHHHTGGG-TTS-------------------------------CC---HHHHHHHHHHH
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHHhh-CcC-------------------------------CC---CCchHHHHHHH
Confidence 5667787765543 677888887655421 111 10 23457999999
Q ss_pred HHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHH
Q 037063 189 MDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGK 267 (588)
Q Consensus 189 a~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~ 267 (588)
++++|+++++ |++|+|+|+|+.+++.++ .++||+|++. ..|++ . ...++..|++++.++.+ +++.+|+++
T Consensus 61 a~~~~~~~~~--i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~-~----~~~~~~~g~~~~~~~~~-~~~~~d~~~ 131 (354)
T 3ly1_A 61 AAHHQVEAPS--ILLTAGSSEGIRAAIEAY-ASLEAQLVIPELTYGD-G----EHFAKIAGMKVTKVKML-DNWAFDIEG 131 (354)
T ss_dssp HHHTTSCGGG--EEEESHHHHHHHHHHHHH-CCTTCEEEEESSSCTH-H----HHHHHHTTCEEEEECCC-TTSCCCHHH
T ss_pred HHHhCCChHH--EEEeCChHHHHHHHHHHH-hCCCCeEEECCCCchH-H----HHHHHHcCCEEEEecCC-CCCCCCHHH
Confidence 9999997665 999999999999999998 8999997654 44443 2 34566789999999997 568899999
Q ss_pred HHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH--cCcEEEEeCCCcCCC-CC---CCCC-CCCC-CCc
Q 037063 268 LMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE--KGWHVLLDATALGSK-DM---DTLG-LSLF-KPD 338 (588)
Q Consensus 268 l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~--~g~~vvvDaa~~~~~-d~---~~l~-l~~~-~~D 338 (588)
|++++++ .+++++|++++++|+||..+|++++ ++++. +|+++|+|+++.... +- ..+. +... ..+
T Consensus 132 l~~~l~~------~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (354)
T 3ly1_A 132 LKAAVAA------YSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENI 205 (354)
T ss_dssp HHHHHHT------CSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSE
T ss_pred HHHHhcc------CCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCE
Confidence 9999971 1479999999999999999999998 88777 999999999976421 00 1111 1112 367
Q ss_pred EEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHH
Q 037063 339 FLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECK 418 (588)
Q Consensus 339 ~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~ 418 (588)
+++.|++|.+|.++.++|++++++++++.+...... ++.+.... +++..
T Consensus 206 i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~---~a~~~ 254 (354)
T 3ly1_A 206 ILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAG----------------------------EKINFSGV---DAALA 254 (354)
T ss_dssp EEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGTTC----------------------------SCCCHHHH---HHHHH
T ss_pred EEEeeChhhccChhhhheeeecCHHHHHHHHHhcCC----------------------------CCCCHHHH---HHHHH
Confidence 999999999984345689999988877666533211 12222222 34445
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHH
Q 037063 419 GLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLAD 498 (588)
Q Consensus 419 aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~ 498 (588)
+|+... .++++.++.+.+++++.+.|.++ | ++++. ..+.++.+.+.+ +...+.+.|.
T Consensus 255 ~l~~~~--~~~~~~~~~~~~~~~l~~~l~~~-------~---~~~~~-----~~~~~~~~~~~~------~~~~~~~~l~ 311 (354)
T 3ly1_A 255 SMNDSA--FITYSKKSNDVSRQILLKALEDL-------K---LPYLP-----SEGNFVFHQLVV------PLKDYQTHMA 311 (354)
T ss_dssp HTTCHH--HHHHHHHHHHHHHHHHHHHHHHH-------T---CCBCC-----CCSSEEEEECSS------CHHHHHHHHH
T ss_pred HhcCHH--HHHHHHHHHHHHHHHHHHHHHHC-------C---CeECC-----CCceEEEEECCC------CHHHHHHHHH
Confidence 555332 26788889999999999999885 2 33332 245676666653 3677777788
Q ss_pred hCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhhh
Q 037063 499 RHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDADF 570 (588)
Q Consensus 499 ~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~~ 570 (588)
++||.++ |.+|. +.+.||+|++ +.+|++++++.|++++++.+
T Consensus 312 ~~gi~v~-g~~~~--------------------------~~~~iRis~~---~~~~i~~~~~~l~~~l~~~~ 353 (354)
T 3ly1_A 312 DAGVLIG-RAFPP--------------------------ADNWCRISLG---TPQEMQWVADTMREFRKKSW 353 (354)
T ss_dssp HTTEECC-CCCTT--------------------------CTTEEEEECC---CHHHHHHHHHHHHHHHHTTC
T ss_pred HCCEEEe-ecCCC--------------------------CCCEEEEEcC---CHHHHHHHHHHHHHHHHhhC
Confidence 8999998 75541 1229999976 89999999999999887643
No 45
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.95 E-value=7.2e-26 Score=237.23 Aligned_cols=343 Identities=11% Similarity=0.076 Sum_probs=242.0
Q ss_pred hCCCCCCchhHHHHHhhhccCCCCCCeeeecCCCCC-CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccc
Q 037063 86 VFPQYLQTDQADRIRAQDYFHLSLNNYVCFDYIGHG-LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRS 164 (588)
Q Consensus 86 ~~p~y~~~~~~~~iR~~~f~~l~~~~~vyLD~a~~g-l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~ 164 (588)
..+.|........+++ .|.. ++.++|+.+-.. +.|+.+++++.+.+.. ..+.|
T Consensus 10 ~~~~~~~~~~~~~~~~-~~~~---~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~y~--------------------- 63 (365)
T 3get_A 10 NLSNYEPGKDIEVIAK-EYGV---KEVIKLASNENPFGTPPKAIECLRQNANK-AHLYP--------------------- 63 (365)
T ss_dssp GSCCCCCCCCHHHHHH-HTTC---SCCEECSSCCCTTCSCHHHHHHHHHHGGG-TTSCC---------------------
T ss_pred hcCCCCCCCCHHHHHH-hcCC---CceEEecCCCCCCCCCHHHHHHHHHHHHh-hccCC---------------------
Confidence 3455554445666665 3543 578899977554 3677888887665531 11111
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHH
Q 037063 165 VNLNSWLQYGSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESS 244 (588)
Q Consensus 165 ~~~~s~~~~g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a 244 (588)
. ... .++|+.|++++|+++++ |++|+|+|+|+.+++.++ +++||+|++....+... ...+
T Consensus 64 ---~-------~~~---~~lr~~la~~~~~~~~~--v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~----~~~~ 123 (365)
T 3get_A 64 ---D-------DSM---IELKSTLAQKYKVQNEN--IIIGAGSDQVIEFAIHSK-LNSKNAFLQAGVTFAMY----EIYA 123 (365)
T ss_dssp ---C-------TTC---HHHHHHHHHHHTCCGGG--EEEESSHHHHHHHHHHHH-CCTTCEEEECSSCCTHH----HHHH
T ss_pred ---C-------CCh---HHHHHHHHHHhCCCcce--EEECCCHHHHHHHHHHHH-hCCCCEEEEeCCChHHH----HHHH
Confidence 0 001 48999999999997655 999999999999999999 89999977654433312 3455
Q ss_pred HhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHH--HcCcEEEEeCCC
Q 037063 245 KKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAA--EKGWHVLLDATA 321 (588)
Q Consensus 245 ~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~--~~g~~vvvDaa~ 321 (588)
+..|++++.++++..++ +|+++|+++++ +++++|++++++|+||..+|++++ ++++ ++|+++|+|+++
T Consensus 124 ~~~g~~~~~v~~~~~~~-~d~~~l~~~l~--------~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~ 194 (365)
T 3get_A 124 KQCGAKCYKTQSITHNL-DEFKKLYETHK--------DEIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAY 194 (365)
T ss_dssp HHHTCEEEECSSSSCCH-HHHHHHHHHTT--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTT
T ss_pred HHcCCEEEEEecCCCCC-CCHHHHHHHhC--------CCCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcc
Confidence 67799999999822567 99999999998 789999999999999999999999 8877 679999999997
Q ss_pred c------CCCC-CCCCCC-CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccc
Q 037063 322 L------GSKD-MDTLGL-SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELET 393 (588)
Q Consensus 322 ~------~~~d-~~~l~l-~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~ 393 (588)
. .+.. ...+.+ .....++++.|++|.+|.++.++|++++++++++.+......
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~------------------- 255 (365)
T 3get_A 195 NEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRAP------------------- 255 (365)
T ss_dssp HHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHHSCT-------------------
T ss_pred HHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHHHHhcCC-------------------
Confidence 6 3200 111110 123367999999999984345689999988877665432211
Q ss_pred ccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc
Q 037063 394 LDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG 473 (588)
Q Consensus 394 ~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg 473 (588)
.+.+.... +++..+|+... .++++.++.+.+++++.+.|.++ +++++.+ .+
T Consensus 256 ---------~~~~~~~~---~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~l~~~----------g~~~~~~-----~~ 306 (365)
T 3get_A 256 ---------FNVSNLAL---KAAVAAMDDDE--FTEKTLENNFSQMELYKEFAKKH----------NIKIIDS-----YT 306 (365)
T ss_dssp ---------TCSCHHHH---HHHHHHHTCHH--HHHHHHHHHHHHHHHHHHHHHHT----------TCEECCC-----SS
T ss_pred ---------CCcCHHHH---HHHHHHhCCHH--HHHHHHHHHHHHHHHHHHHHHhC----------CCEECCC-----CC
Confidence 01222221 34445555322 36888889999999999999884 3455432 45
Q ss_pred cEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHH
Q 037063 474 PSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFE 553 (588)
Q Consensus 474 ~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~e 553 (588)
.++.+.+.+. +...+.+.|.++||.++.|..|. .+.||+|++ +.+
T Consensus 307 ~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~g~~~~---------------------------~~~iRis~~---~~~ 351 (365)
T 3get_A 307 NFITYFFDEK-----NSTDLSEKLLKKGIIIRNLKSYG---------------------------LNAIRITIG---TSY 351 (365)
T ss_dssp SEEEEECSSS-----CHHHHHHHHHTTTEECEECGGGT---------------------------CSEEEEECC---CHH
T ss_pred eEEEEECCCC-----CHHHHHHHHHHCCEEEEECccCC---------------------------CCEEEEEcC---CHH
Confidence 6666666541 57778888888899999886541 128999987 899
Q ss_pred HHHHHHHHHHHhh
Q 037063 554 DTYRLWAFVSRFL 566 (588)
Q Consensus 554 Dv~~li~~l~~~l 566 (588)
|++++++.|++++
T Consensus 352 ~i~~l~~~l~~~l 364 (365)
T 3get_A 352 ENEKFFTEFDKIL 364 (365)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999876
No 46
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.95 E-value=7e-25 Score=230.03 Aligned_cols=322 Identities=10% Similarity=0.013 Sum_probs=215.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--CCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--FYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
...+++|+.|++++|++ .+++|+|+|+|+.+++.++. +++||+|++ ...|++ .. ..++..|++++.++
T Consensus 32 ~~~~~l~~~la~~~~~~----~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~-~~----~~~~~~g~~~~~~~ 102 (375)
T 2fnu_A 32 KRSLLFEEALCEFLGVK----HALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVA-TA----NMLLESGYTPVFAG 102 (375)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTH-HH----HHHHHTTCEEEECC
T ss_pred hHHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHh-HH----HHHHHCCCEEEEec
Confidence 45679999999999985 49999999999999999997 789999765 455654 22 23456899999999
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCC
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSL 334 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~ 334 (588)
++ +++.+|+++|+++++ +++++|+++++ ||...|+++| ++|+++|+++|+|+++..+.......+..
T Consensus 103 ~~-~~~~~d~~~l~~~i~--------~~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~ 170 (375)
T 2fnu_A 103 IK-NDGNIDELALEKLIN--------ERTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGG 170 (375)
T ss_dssp BC-TTSSBCGGGSGGGCC--------TTEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTS
T ss_pred cC-CCCCCCHHHHHhhcC--------cCceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeECCeeccc
Confidence 97 556899999988887 67898888776 9999999999 99999999999999988762111100222
Q ss_pred CCCcEEEeccC--ccCCCCCCceEEEEEe--CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc-c
Q 037063 335 FKPDFLICSFY--KIFGENPSGFGCLFVK--KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS-G 409 (588)
Q Consensus 335 ~~~D~vv~S~~--K~~G~~P~G~G~L~v~--~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~-~ 409 (588)
+ .|+++.|++ |++| | |+|+++++ +++++.+.+...+ +.....+ .+| +.++.++. .
T Consensus 171 ~-~~i~~~s~s~~K~~~--~-g~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~-------------~~~-~~~~~~~~~~ 230 (375)
T 2fnu_A 171 F-ALASVFSFHAIKPIT--T-AEGGAVVTNDSELHEKMKLFRSH--GMLKKDF-------------FEG-EVKSIGHNFR 230 (375)
T ss_dssp S-SSEEEEECCTTSSSC--C-SSCEEEEESCHHHHHHHHHHTBT--TEEESSS-------------SCE-EESSCCCBCC
T ss_pred c-CCeEEEeCCCCCCcc--c-cCceEEEeCCHHHHHHHHHHHhc--CCccccc-------------ccc-ccccccccCC
Confidence 2 256655555 9998 7 89999995 3466666544333 1110000 022 22222211 1
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCc-ccEEEEEeecCCCCCc
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDR-GPSLAFNVFDWNGTRI 488 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~r-g~iv~f~~~~~~g~~i 488 (588)
. ..+..++.+....+++.+.++.+.+++++.+.|.++ ++++++.+...... +.++.+.+... + +
T Consensus 231 ~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~ 295 (375)
T 2fnu_A 231 L---NEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDN---------PYFTPLHPLLKDKSSNHLYPILMHQK-F--F 295 (375)
T ss_dssp C---CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTC---------SSEEESGGGCSSCCCCSCEEEEECGG-G--G
T ss_pred C---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---------CCccccCCCCCCCcceEEEEEEeCcc-c--c
Confidence 1 122233333333467889999999999999999884 67888765211112 23444555431 1 2
Q ss_pred -CHHHHHHHHHhCCcEeccccccCcccccchHH--------HHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHH
Q 037063 489 -DPALVQKLADRHNISLSCGFLQNIFFSGEYEQ--------ERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLW 559 (588)
Q Consensus 489 -~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~--------~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li 559 (588)
+...+.+.|.++||.++.+ |.+........ ....... ...||+|++.++|.|||++++
T Consensus 296 ~~~~~l~~~L~~~gi~v~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~-----------~~~lRi~~~~~~t~~~i~~~~ 362 (375)
T 2fnu_A 296 TCKKLILESLHKRGILAQVH--YKPIYQYQLYQQLFNTAPLKSAEDFY-----------HAEISLPCHANLNLESVQNIA 362 (375)
T ss_dssp GGHHHHHHHHHHTTEECBCC--CCCGGGSHHHHHHHCCCCCHHHHHHH-----------HHEEEECCCTTCCHHHHHHHH
T ss_pred chHHHHHHHHHHCCCCcccc--ccccccchhhhcCCCccCChHHHHHH-----------hCEEEecCCCCCCHHHHHHHH
Confidence 4677888888899999843 43321110000 0000011 128999999999999999999
Q ss_pred HHHHHhhhhh
Q 037063 560 AFVSRFLDAD 569 (588)
Q Consensus 560 ~~l~~~l~~~ 569 (588)
+.|++++++.
T Consensus 363 ~~l~~~~~~~ 372 (375)
T 2fnu_A 363 HSVLKTFESF 372 (375)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999987653
No 47
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.95 E-value=3.2e-27 Score=257.90 Aligned_cols=361 Identities=12% Similarity=0.042 Sum_probs=240.7
Q ss_pred eeeecCCCCCCCCHHHHHHhhhhcccCc-CCCCCCCCCCCCCCCCCcccccccccccccccccCCc--hhHHHHHHHHHH
Q 037063 112 YVCFDYIGHGLFSYSQMHSCSSNVHSSA-ASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSE--ESELESKIRKRI 188 (588)
Q Consensus 112 ~vyLD~a~~gl~~~~~~~~~~~~~~~~~-~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~--~~~~~~~~r~~i 188 (588)
.+.| .++.++.|+.+++++.+.+.... .++|. +. .|++. ..++++.+++++
T Consensus 46 ~i~L-~a~e~~~~~~V~eA~~~~l~~~~~~g~p~------------------------~~-~y~~~~~~~~le~~~~~~~ 99 (483)
T 1rv3_A 46 GLEL-IASENFASRAVLEALGSCLNNKYSLGYPG------------------------QR-YYGGTEHIDELETLCQKRA 99 (483)
T ss_dssp SEEC-CTTCCCCCHHHHHHHTSGGGTCCCCEETT------------------------EE-SSSCCHHHHHHHHHHHHHH
T ss_pred CeEE-EcCCCCCCHHHHHHHHHHHhccCcccCCC------------------------cc-ccCcchhHHHHHHHHHHHH
Confidence 4455 36677899999999876654211 13441 11 12221 257788999999
Q ss_pred HHHhCCCCCC--ceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHH---HHHHhcC--CEEEEEeccCCC
Q 037063 189 MDFMNISEDD--YTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMI---ESSKKRG--ARVSSAEFAWPN 260 (588)
Q Consensus 189 a~~lga~~~e--~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~---~~a~~~G--~~v~~v~~~~~~ 260 (588)
++++|+++++ ..|++++|+ +++.+++.++ ++|||+|+ ...+|.+....+.. ..++..| ++++.++++..+
T Consensus 100 a~~~g~~~~~~~~~V~~~sGs-~an~~~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~ 177 (483)
T 1rv3_A 100 LQAYGLDPQCWGVNVQPYSGS-PANFAVYTAL-VEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDT 177 (483)
T ss_dssp HHHTTCCTTTEEEECCCSSHH-HHHHHHHHHH-TCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTT
T ss_pred HHHhCCCcccCceEEEECCcH-HHHHHHHHHh-cCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCC
Confidence 9999998654 347777777 8888878888 89999966 45555542211100 0001123 455555556456
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC---CCCCCCCCCCCC
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS---KDMDTLGLSLFK 336 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~---~d~~~l~l~~~~ 336 (588)
+.+|.++|++++++ ++|++|++ +.+|++ .+.|+++| ++|+++|++|++|++|..+ .+.....+. .
T Consensus 178 ~~iD~d~le~~i~~-------~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~--~ 246 (483)
T 1rv3_A 178 GYIDYDRLEENARL-------FHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE--H 246 (483)
T ss_dssp CSBCHHHHHHHHHH-------HCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG--T
T ss_pred CcCCHHHHHHHHhh-------cCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC--C
Confidence 88999999999973 46899999 899988 99999999 9999999999999998764 112222111 3
Q ss_pred CcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccc-cCCCCCccchhhHHH
Q 037063 337 PDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS-KFPESSISGVSSKLV 415 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~-e~GT~~~~~~~~~~a 415 (588)
+|++++|+||.|+. |.| |+++++++... ++ ..+ |...... . ...+... .|. ..||++...+ ++
T Consensus 247 ~div~~s~~K~l~G-prg-G~i~~~~~~~~-~~--~~~--g~~~~y~--~-~~~~~~~---~~~~~~g~~~~~~i---aa 310 (483)
T 1rv3_A 247 CHVVTTTTHKTLRG-CRA-GMIFYRRGVRS-VD--PKT--GKEILYN--L-ESLINSA---VFPGLQGGPHNHAI---AG 310 (483)
T ss_dssp CSEEEEESSGGGCC-CSC-EEEEEECSBCC------------CCBCC--H-HHHHHHH---HTTTTCCSCCHHHH---HH
T ss_pred CcEEEecCcccCCC-CCc-eEEEEcchhhh-hc--ccc--CcchhhH--H-HHHhhhh---cCCcccCCccHHHH---HH
Confidence 89999999996642 888 99999998643 33 112 1100000 0 0000000 110 3577777765 67
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHH
Q 037063 416 ECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQK 495 (588)
Q Consensus 416 l~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~ 495 (588)
+..|++.+...+++.+.+++..+++++.+.|.++ +++++.+.. ....+.+.+... | ++...+.+
T Consensus 311 l~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~---~~~~~~v~~~~~-g--~~~~~~~~ 374 (483)
T 1rv3_A 311 VAVALKQAMTPEFKEYQRQVVANCRALSAALVEL----------GYKIVTGGS---DNHLILVDLRSK-G--TDGGRAEK 374 (483)
T ss_dssp HHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT----------TCEEGGGSC---SSSEEEEEGGGG-T--CCHHHHHH
T ss_pred HHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc----------CCEeccCCC---CCceEEEeccCC-C--CCHHHHHH
Confidence 7788888765567899999999999999999984 466665421 123444444321 1 56778889
Q ss_pred HHHhCCcEec----cccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCC----HHHHHHHHHHHHHhhh
Q 037063 496 LADRHNISLS----CGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTN----FEDTYRLWAFVSRFLD 567 (588)
Q Consensus 496 ~l~~~gI~v~----~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t----~eDv~~li~~l~~~l~ 567 (588)
+|++.||.++ +|..|. .+.+.||+|++.+++ .+|++++++.|+++++
T Consensus 375 ~L~~~gI~v~~~~~pg~~~~-------------------------~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~ 429 (483)
T 1rv3_A 375 VLEACSIACNKNTCPGDKSA-------------------------LRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIE 429 (483)
T ss_dssp HHHHTTEECEEECCSSCSCT-------------------------TSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCcEEecCCCCCCCcC-------------------------CCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHH
Confidence 9999999998 665442 223389999998888 9999999999999887
Q ss_pred h
Q 037063 568 A 568 (588)
Q Consensus 568 ~ 568 (588)
.
T Consensus 430 ~ 430 (483)
T 1rv3_A 430 L 430 (483)
T ss_dssp H
T ss_pred h
Confidence 5
No 48
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.95 E-value=6.6e-25 Score=240.81 Aligned_cols=368 Identities=12% Similarity=0.019 Sum_probs=238.0
Q ss_pred CeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHH
Q 037063 111 NYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMD 190 (588)
Q Consensus 111 ~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~ 190 (588)
...||+|..+++.|..++..+.... .|++..+ |+ .+. ...++++++++++++
T Consensus 92 ~p~~~~~~~~~~~~~~~~~~~l~~~-----~n~~~~~-----~~-------------~~~-----~~~~le~~~~~~la~ 143 (504)
T 2okj_A 92 HPRFFNQLSTGLDIIGLAGEWLTST-----ANTNMFT-----YE-------------IAP-----VFVLMEQITLKKMRE 143 (504)
T ss_dssp CTTEESSSSCCCCHHHHHHHHHHHH-----HCCBSSC-----TT-------------TCH-----HHHHHHHHHHHHHHH
T ss_pred CCCEEEEccCCCCHHHHHHHHHHHh-----hccCCCc-----hh-------------hCh-----HHHHHHHHHHHHHHH
Confidence 4569999999988877765443221 1221000 00 000 125678888999999
Q ss_pred HhCCCCCCceEEEecCHHHHHHHHHHhCCC-------CCC-----C-eEEE-cCCCchhHHHHHHHHHHhcCC---EEEE
Q 037063 191 FMNISEDDYTLVFTANQSSAFKLLAESYPF-------YSN-----P-RLLT-VYDHENEAAALMIESSKKRGA---RVSS 253 (588)
Q Consensus 191 ~lga~~~e~~vvft~g~T~al~lv~~s~~~-------~~g-----d-~ll~-~~e~~s~~~~~~~~~a~~~G~---~v~~ 253 (588)
++|++.+...++||+|+|+|+.+++.++.. ++| + +|++ ...|++ + .+.++..|. +++.
T Consensus 144 ~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s--~---~~~~~~~g~g~~~v~~ 218 (504)
T 2okj_A 144 IVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS--I---KKAGAALGFGTDNVIL 218 (504)
T ss_dssp HHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH--H---HHHHHHTTSCGGGEEE
T ss_pred HhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHH--H---HHHHHHcCCCcccEEE
Confidence 999974234699999999999988877621 145 5 5554 456664 2 233344455 8999
Q ss_pred EeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCC-CC--
Q 037063 254 AEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDM-DT-- 329 (588)
Q Consensus 254 v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~-~~-- 329 (588)
+|.+ +++.+|+++|+++|++. +....++++|++++++|+||.+.|+++| ++|+++|++++||+++..+.-. ..
T Consensus 219 v~~~-~~~~~d~~~L~~~i~~~--~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~ 295 (504)
T 2okj_A 219 IKCN-ERGKIIPADFEAKILEA--KQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHR 295 (504)
T ss_dssp ECBC-TTSCBCHHHHHHHHHHH--HHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTG
T ss_pred EecC-CCCCCCHHHHHHHHHHH--HHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhH
Confidence 9997 67899999999999731 1112368999999999999999999999 9999999999999997665211 00
Q ss_pred CCCC-CCCCcEEEeccCccCCCCCCceEEEEEeCc-chhc----ccCCCCCCCceEeeecCCCcccccccccccccccCC
Q 037063 330 LGLS-LFKPDFLICSFYKIFGENPSGFGCLFVKKS-SASV----LSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP 403 (588)
Q Consensus 330 l~l~-~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~-~~~~----l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G 403 (588)
..+. ...+|++++++||++|. |.|+|+++++++ .+.. ..++..++ +...... ..+... .. + +
T Consensus 296 ~~~~g~~~~D~i~~~~hK~~~~-p~~~g~l~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~-----~~~~~~---~~-~-~ 363 (504)
T 2okj_A 296 HKLNGIERANSVTWNPHKMMGV-LLQCSAILVKEKGILQGCNQMCAGYLFQP-DKQYDVS-----YDTGDK---AI-Q-C 363 (504)
T ss_dssp GGGTTGGGCSEEEECTTSTTCC-CSCCEEEEESSTTHHHHHHCCCCSSSCCS-CCSSCGG-----GCCGGG---SS-C-S
T ss_pred hhcCCcccCCEEEECchhhcCC-CcceEEEEEECHHHHHHHhcCCCccccCC-cccccCc-----CCcccC---CC-C-C
Confidence 1122 12589999999999886 889999999985 5442 22233221 1100000 000000 00 1 1
Q ss_pred CCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecC
Q 037063 404 ESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDW 483 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~ 483 (588)
+..+.. ..+..+++.+...|++++.++...+++++.+.|.++ ++++++.+.. ...++++|...+.
T Consensus 364 ~rr~~~----l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~---------~~~~~~~~~~--p~~~~v~f~~~~~ 428 (504)
T 2okj_A 364 GRHVDI----FKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNR---------EEFEMVFNGE--PEHTNVCFWYIPQ 428 (504)
T ss_dssp SCBCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---------TTEEESSSSC--CSSSCEEEEECCG
T ss_pred CCCccH----HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcC---------CCEEEEecCC--CCeEEEEEEEeCc
Confidence 111111 233344555555678899999999999999999874 6789887421 3567888876431
Q ss_pred C--CCC--------c--CHHHHHHHHHhCCcE-eccccccCcccccchHHHHHHHHhhhcCCCCCcCCc-cEEEEecC-C
Q 037063 484 N--GTR--------I--DPALVQKLADRHNIS-LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGV-SVVTAALG-C 548 (588)
Q Consensus 484 ~--g~~--------i--~~~~v~~~l~~~gI~-v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~-~~vRvSlg-~ 548 (588)
. +.. . ....+.+.|.+.|+. +..+.. .|. .++|+|++ .
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~---------------------------~~~~~~lRis~~~~ 481 (504)
T 2okj_A 429 SLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQ---------------------------GDKANFFRMVISNP 481 (504)
T ss_dssp GGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEE---------------------------TTEEEEEEECCCCT
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEE---------------------------CCceEEEEEEeCCC
Confidence 1 000 0 023455556666753 332210 122 38999996 9
Q ss_pred CCCHHHHHHHHHHHHHhhhh
Q 037063 549 LTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 549 ~~t~eDv~~li~~l~~~l~~ 568 (588)
++|.+||+++++.|++++++
T Consensus 482 ~~t~edi~~~~~~l~~~~~~ 501 (504)
T 2okj_A 482 AATQSDIDFLIEEIERLGQD 501 (504)
T ss_dssp TCCHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999988764
No 49
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.94 E-value=3.2e-25 Score=229.33 Aligned_cols=315 Identities=16% Similarity=0.189 Sum_probs=222.2
Q ss_pred CCeeeecCCCCC-CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHG-LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRI 188 (588)
Q Consensus 110 ~~~vyLD~a~~g-l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~i 188 (588)
++.++|+.+... +.|+.+.+++...+.. .. .|. .....++|+.|
T Consensus 16 ~~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~~-------------------------------~y~---~~~~~~lr~~l 60 (337)
T 3p1t_A 16 AQAVCLAFNENPEAVEPRVQAAIAAAAAR-IN-------------------------------RYP---FDAEPRVMRKL 60 (337)
T ss_dssp CCCEECSSCCCCSCCCHHHHHHHHHHGGG-TT-------------------------------SCC---TTHHHHHHHHH
T ss_pred CCceEeeCCCCCCCCCHHHHHHHHHhhhh-hc-------------------------------cCC---CCchHHHHHHH
Confidence 567999988554 4567777776544321 10 011 12356899999
Q ss_pred HHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcC-CCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHH
Q 037063 189 MDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVY-DHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGK 267 (588)
Q Consensus 189 a~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~-e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~ 267 (588)
++++|+++++ |+||+|+|+++.+++.++ +||+|++.. .|++ . ...++..|++++.++.+ +++.+|+++
T Consensus 61 a~~~~~~~~~--i~~t~G~~~~l~~~~~~~---~gd~vl~~~p~~~~-~----~~~~~~~g~~~~~v~~~-~~~~~d~~~ 129 (337)
T 3p1t_A 61 AEHFSCPEDN--LMLVRGIDECFDRISAEF---SSMRFVTAWPGFDG-Y----RARIAVSGLRHFEIGLT-DDLLLDPND 129 (337)
T ss_dssp HHHHTSCGGG--EEEESHHHHHHHHHHHHS---TTSEEEEESSSCSH-H----HHHHTTSCCEEEEECBC-TTSSBCHHH
T ss_pred HHHhCcCHHH--EEEeCCHHHHHHHHHHhc---CCCeEEEeCCCcHH-H----HHHHHHcCCEEEEecCC-CCCCCCHHH
Confidence 9999997655 999999999999999987 799976544 4442 2 34567789999999987 567899988
Q ss_pred HHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCc--CCCCCCCCCCCCCCCcEEEecc
Q 037063 268 LMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATAL--GSKDMDTLGLSLFKPDFLICSF 344 (588)
Q Consensus 268 l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~--~~~d~~~l~l~~~~~D~vv~S~ 344 (588)
|+++ .+++++++++++|+||..+|+++| ++|+++++ +++|.++. ... ....+.....++++.|+
T Consensus 130 l~~~----------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~--~~~~~~~~~~~i~~~S~ 196 (337)
T 3p1t_A 130 LAQV----------SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSF--RARGLAYGENELVFRSF 196 (337)
T ss_dssp HTTC----------CTTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSC--SSSCCCCBTTEEEEEES
T ss_pred HHhh----------cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhccc--cccccccCCCEEEEeeC
Confidence 7643 357899999999999999999999 99999997 66699865 221 11122223478999999
Q ss_pred CccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHH
Q 037063 345 YKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHAD 424 (588)
Q Consensus 345 ~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~ 424 (588)
+|.+|.++.++|++++++++++.+...... ++.+..+. .++..+|+...
T Consensus 197 sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~----------------------------~~~~~~~~---~a~~~~l~~~~ 245 (337)
T 3p1t_A 197 SKSYGLAGLRLGALFGPSELIAAMKRKQWF----------------------------CNVGTLDL---HALEAALDNDR 245 (337)
T ss_dssp SSTTCCTTTCCEEEECCHHHHHHHHTTSCT----------------------------TCSCHHHH---HHHHHHHTCHH
T ss_pred chhccCcchheEEEEeCHHHHHHHHhhcCC----------------------------CCCCHHHH---HHHHHHhCCHH
Confidence 999984455689999998887766543211 11222221 33334444322
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEe
Q 037063 425 ALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISL 504 (588)
Q Consensus 425 ~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v 504 (588)
. +++..+++...++++.+.|.++ +++++. ..++++.+...+ ...+.++|.++||.+
T Consensus 246 ~--~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~-----~~~~~~~~~~~~-------~~~~~~~l~~~gi~v 301 (337)
T 3p1t_A 246 A--REAHIAKTLAQRRRVADALRGL----------GYRVAS-----SEANFVLVENAA-------GERTLRFLRERGIQV 301 (337)
T ss_dssp H--HHHHHHHHHHHHHHHHHHHHHT----------TCCBCC-----CSSSEEEEECTT-------THHHHHHHHHTTEEC
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHC----------cCEECC-----CCCeEEEEEcCC-------HHHHHHHHHHCCeEE
Confidence 2 4566677777888899999875 233333 245666665543 456778888999999
Q ss_pred ccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 505 SCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 505 ~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
+.|..|.. . ++||+|++ +.+|+++++++|+++++
T Consensus 302 ~~g~~~~~------------------------~--~~iRis~~---~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 302 KDAGQFGL------------------------H--HHIRISIG---REEDNDRLLAALAEYSD 335 (337)
T ss_dssp EEGGGGTC------------------------C--SEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred EECccCCC------------------------C--CeEEEecC---CHHHHHHHHHHHHHHhh
Confidence 99866520 1 28999987 79999999999998765
No 50
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.94 E-value=2.3e-25 Score=233.56 Aligned_cols=288 Identities=11% Similarity=0.083 Sum_probs=211.9
Q ss_pred HHHHHHHHHHHhCC-CCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccC
Q 037063 181 ESKIRKRIMDFMNI-SEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAW 258 (588)
Q Consensus 181 ~~~~r~~ia~~lga-~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~ 258 (588)
..++|+.+++++|+ +++ .|+||+|+|+|+++++.++ +++||+|++ ...|+. . ...++..|++++.++++
T Consensus 69 ~~~l~~~la~~~g~~~~~--~i~~~~g~t~a~~~~~~~~-~~~gd~Vl~~~~~~~~-~----~~~~~~~g~~~~~v~~~- 139 (367)
T 3euc_A 69 SEALRAKLKEVMQVPAGM--EVLLGNGSDEIISMLALAA-ARPGAKVMAPVPGFVM-Y----AMSAQFAGLEFVGVPLR- 139 (367)
T ss_dssp HHHHHHHHHHHHTCCTTC--EEEEEEHHHHHHHHHHHHT-CCTTCEEEEEESCSCC-S----CHHHHTTTCEEEEEECC-
T ss_pred HHHHHHHHHHHhCCCCcc--eEEEcCCHHHHHHHHHHHH-cCCCCEEEEcCCCHHH-H----HHHHHHcCCeEEEecCC-
Confidence 35899999999999 443 5999999999999999999 899999664 445543 2 23456789999999998
Q ss_pred CCCccCHHHHHHHHhhhccccCCC-cceEEEEeCCCCCCCccCCHHHH----HHHHHc--CcEEEEeCCCcCCCCCCCC-
Q 037063 259 PNLRIHSGKLMKKIVGKRKKKKKK-KRGLFVFPLQSKVTGARYSYMWM----SVAAEK--GWHVLLDATALGSKDMDTL- 330 (588)
Q Consensus 259 ~~~~i~~e~l~~~i~~~~~~~~~~-~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~--g~~vvvDaa~~~~~d~~~l- 330 (588)
+++.+|+++|+++++ + ++++|++++++|+||..+|.+++ ++|+++ |+++|+|+++..-.....+
T Consensus 140 ~~~~~d~~~l~~~l~--------~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~ 211 (367)
T 3euc_A 140 ADFTLDRGAMLAAMA--------EHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMS 211 (367)
T ss_dssp TTSCCCHHHHHHHHH--------HHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGG
T ss_pred CCCCCCHHHHHHHhh--------ccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHH
Confidence 577899999999998 4 78999999999999999986664 568889 9999999996531000000
Q ss_pred CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 331 GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 331 ~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
.+.....++++.|++|. |.++.++|++++++++++.+...... .+.+....
T Consensus 212 ~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~ 262 (367)
T 3euc_A 212 RLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQWLEQLDKVRPP----------------------------YNVNVLTE 262 (367)
T ss_dssp GGGTCTTEEEEEECCCT-TSCSCCEEEEEECHHHHHHHGGGCCS----------------------------SCCCHHHH
T ss_pred HHhhCCCEEEEecchhh-cccccCceeeeeCHHHHHHHHHhCCC----------------------------CCCCHHHH
Confidence 12233467899999998 64345689999988877666433211 01222221
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCH
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDP 490 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~ 490 (588)
+++..+|+. .. .++++.++.+.+++++.+.|.++ |+++++. ..+.++.+.+. +.
T Consensus 263 ---~a~~~~l~~-~~-~~~~~~~~~~~~~~~l~~~l~~~---------~g~~~~~-----~~~~~~~~~~~-------~~ 316 (367)
T 3euc_A 263 ---ATALFALEH-VA-VLDEQAAQLRAERSRVAEGMAAH---------GGVTVFP-----SAANFLLARVP-------DA 316 (367)
T ss_dssp ---HHHHHHHTT-HH-HHHHHHHHHHHHHHHHHHHHHTS---------TTCEECC-----CSSSEEEEECS-------CH
T ss_pred ---HHHHHHhcC-HH-HHHHHHHHHHHHHHHHHHHHHhC---------CCcEECC-----CCCeEEEEECC-------CH
Confidence 344455655 22 26888899999999999999884 5666543 24566666654 36
Q ss_pred HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 491 ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 491 ~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
..+.+.|.++||.++.|..|.. .+.++||+|++ +.+|++++++.|+++++
T Consensus 317 ~~l~~~l~~~gi~v~~~~~~~~------------------------~~~~~iRis~~---~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 317 AQTFDRLLARKVLIKNVSKMHP------------------------LLANCLRVTVS---TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp HHHHHHHHTTTEECEECGGGCG------------------------GGTTEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCeEEEECCccCC------------------------CCCCEEEEecC---CHHHHHHHHHHHHHHhc
Confidence 7788888999999998866521 11229999987 89999999999998764
No 51
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.94 E-value=4.6e-25 Score=232.74 Aligned_cols=309 Identities=12% Similarity=0.067 Sum_probs=215.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
.++.+++++.+++.+|.+.+...|+||+|+|+|+.+++.++ +++||+|++....+... ...++..|++++.++++
T Consensus 65 ~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~----~~~~~~~g~~~~~~~~~ 139 (391)
T 3dzz_A 65 AEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQF-TSPGDQILVQEPVYNMF----YSVIEGNGRRVISSDLI 139 (391)
T ss_dssp HHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHH-SCTTCEEEECSSCCHHH----HHHHHHTTCEEEECCCE
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHh-CCCCCeEEECCCCcHHH----HHHHHHcCCEEEEeeee
Confidence 57788899999999884333345999999999999999999 89999977654433312 34556789999999985
Q ss_pred C--CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCH---HHH-HHHHHcCcEEEEeCCCcCCC-C-CCC
Q 037063 258 W--PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSY---MWM-SVAAEKGWHVLLDATALGSK-D-MDT 329 (588)
Q Consensus 258 ~--~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl---~~I-~~a~~~g~~vvvDaa~~~~~-d-~~~ 329 (588)
+ .+..+|+++|+++|++ +++++|++++++|+||..+|. ++| ++|+++|+++|+|+++.... . ...
T Consensus 140 ~~~~~~~~d~~~l~~~l~~-------~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~ 212 (391)
T 3dzz_A 140 YENSKYSVNWADLEEKLAT-------PSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDI 212 (391)
T ss_dssp EETTEEECCHHHHHHHHTS-------TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCC
T ss_pred ecCCceeecHHHHHHHHhc-------cCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCc
Confidence 2 2334899999999972 579999999999999999664 556 78999999999999976421 0 011
Q ss_pred CCCCCC---CCc--EEEeccCccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCC
Q 037063 330 LGLSLF---KPD--FLICSFYKIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP 403 (588)
Q Consensus 330 l~l~~~---~~D--~vv~S~~K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G 403 (588)
..+... .+| +++.|+||.+|.++.++|+++++ +++++.+...... + ...
T Consensus 213 ~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~------------------------~-~~~ 267 (391)
T 3dzz_A 213 TPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFFL------------------------A-GIG 267 (391)
T ss_dssp CCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHHH------------------------H-TCS
T ss_pred eehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHHh------------------------h-ccC
Confidence 111111 156 99999999887434569999997 6666655432110 0 111
Q ss_pred CCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecC
Q 037063 404 ESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDW 483 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~ 483 (588)
+.+.... +++..+++..... ++++.++.+.+++++.+.|.++ .|+++++.+. .+.++.+.+...
T Consensus 268 ~~~~~~~---~a~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~--------~~~~~~~~~~----~~~~~~~~~~~~ 331 (391)
T 3dzz_A 268 EPNLLAI---PAAIAAYEEGHDW-LRELKQVLRDNFAYAREFLAKE--------VPEVKVLDSN----ASYLAWVDISAL 331 (391)
T ss_dssp SCCTTHH---HHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHH--------CTTSEECCCC----BSSEEEEECGGG
T ss_pred CCCHHHH---HHHHHHHhccHHH-HHHHHHHHHHHHHHHHHHHHhh--------CCCcEEeccC----ceEEEEEehhhc
Confidence 2333332 4444566543222 6788889999999999999882 2567776542 233333555431
Q ss_pred CCCCcCHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHH
Q 037063 484 NGTRIDPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 484 ~g~~i~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l 562 (588)
| ++...+.+.| +++||.+++|..|.. .+.++||+|++ ++.+|++++++.|
T Consensus 332 -~--~~~~~~~~~l~~~~gi~v~~g~~~~~------------------------~~~~~iRis~~--~~~~~i~~~l~~l 382 (391)
T 3dzz_A 332 -G--MNAEDFCKYLREKTGLIISAGNGYRG------------------------NGHEFVRINLA--CPKELVIDGMQRL 382 (391)
T ss_dssp -C--SCHHHHHHHHHHHHCEECEESGGGCT------------------------TGGGEEEEECC--SCHHHHHHHHHHH
T ss_pred -C--CCHHHHHHHHHHhCCEEEeCchhhCC------------------------CCCCEEEEEec--CCHHHHHHHHHHH
Confidence 1 4567776666 689999999876631 12239999988 6999999999999
Q ss_pred HHhhhh
Q 037063 563 SRFLDA 568 (588)
Q Consensus 563 ~~~l~~ 568 (588)
++++++
T Consensus 383 ~~~l~~ 388 (391)
T 3dzz_A 383 KQGVLN 388 (391)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 998764
No 52
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.94 E-value=2.3e-24 Score=231.43 Aligned_cols=301 Identities=13% Similarity=0.027 Sum_probs=219.4
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
.+...++++.|++++|++ .+++++++++|+..++.++ +++||+|++....|.... ..++..|++++.++.
T Consensus 108 ~~~~~~l~~~la~~~g~~----~~i~~~sGs~a~~~al~~l-~~~gd~vl~~~~~h~~~~----~~~~~~g~~~~~~~~- 177 (427)
T 2w8t_A 108 FHDHMEVEQALRDFYGTT----GAIVFSTGYMANLGIISTL-AGKGEYVILDADSHASIY----DGCQQGNAEIVRFRH- 177 (427)
T ss_dssp CHHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHH-SCTTCEEEEETTCCHHHH----HHHHHSCSEEEEECT-
T ss_pred cHHHHHHHHHHHHHhCCC----ceEEecCcHHHHHHHHHHh-cCCCCEEEECCcccHHHH----HHHHHcCCeeEEeCC-
Confidence 366789999999999984 2667777778988888888 889999776655554233 334567999888763
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCC---C----C
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDM---D----T 329 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~---~----~ 329 (588)
+|+++|+++|.+ ....++++|++++++|++|.+.|+++| ++|+++|+++|+|+++..+.-- . .
T Consensus 178 -----~d~~~le~~l~~----~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~ 248 (427)
T 2w8t_A 178 -----NSVEDLDKRLGR----LPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEA 248 (427)
T ss_dssp -----TCHHHHHHHHHT----SCSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHH
T ss_pred -----CCHHHHHHHHHh----ccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhh
Confidence 588999999972 111278999999999999999999999 9999999999999998775210 0 0
Q ss_pred CCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccc
Q 037063 330 LGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISG 409 (588)
Q Consensus 330 l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~ 409 (588)
+++. .++|+++.|++|++| +.| |++++++++++.+.+.... + . ..++.+..+
T Consensus 249 ~~~~-~~~di~~~s~sK~~g--~~g-G~v~~~~~l~~~l~~~~~~----------------~------~--~~~~~~~~~ 300 (427)
T 2w8t_A 249 QGLE-GQIDFVVGTFSKSVG--TVG-GFVVSNHPKFEAVRLACRP----------------Y------I--FTASLPPSV 300 (427)
T ss_dssp TTCT-TCCSEEEEESSSTTC--SCC-EEEEECCTTGGGGGGTCHH----------------H------H--SSCCCCHHH
T ss_pred cCCC-cCCcEEEecchhhhc--cCC-CEEEeCHHHHHHHHHhccc----------------c------c--ccCCCCHHH
Confidence 3432 247999999999999 557 9999999887766543100 0 1 122344433
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcC
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRID 489 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~ 489 (588)
. +++.++|+.+.. ++.+.++++.+++++.+.|.++ +++++++. ..++++.+.+.+. ..
T Consensus 301 ~---aa~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~---~~~~~~~~~~~~~----~~ 358 (427)
T 2w8t_A 301 V---ATATTSIRKLMT--AHEKRERLWSNARALHGGLKAM----------GFRLGTET---CDSAIVAVMLEDQ----EQ 358 (427)
T ss_dssp H---HHHHHHHHHHTS--CHHHHHHHHHHHHHHHHHHHHH----------TCEESCSS---CCSSEEEEEESSH----HH
T ss_pred H---HHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc----------CCcccCCC---CCCCEEEEEECCH----HH
Confidence 2 455577777653 4788999999999999999985 34555332 2568888887531 23
Q ss_pred HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 490 PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 490 ~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
...+.+.|.++||.++.|..+.. ..+...||++++.+++.+||+++++.|++++++.
T Consensus 359 ~~~l~~~L~~~Gi~v~~~~~~~~-----------------------~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~ 415 (427)
T 2w8t_A 359 AAMMWQALLDGGLYVNMARPPAT-----------------------PAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAV 415 (427)
T ss_dssp HHHHHHHHHHTTEECEEECTTTS-----------------------CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCeEEeeeCCCCC-----------------------CCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 45666777777999988754310 0223489999999999999999999999988654
Q ss_pred h
Q 037063 570 F 570 (588)
Q Consensus 570 ~ 570 (588)
.
T Consensus 416 ~ 416 (427)
T 2w8t_A 416 G 416 (427)
T ss_dssp T
T ss_pred C
Confidence 3
No 53
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.7e-25 Score=243.27 Aligned_cols=311 Identities=12% Similarity=0.057 Sum_probs=232.4
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC-----CC---CeEEEcCCCchhHHHHHHHHHHhcCC
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY-----SN---PRLLTVYDHENEAAALMIESSKKRGA 249 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~-----~g---d~ll~~~e~~s~~~~~~~~~a~~~G~ 249 (588)
.++++++++++++++|++.+...++||+|+|+|+.+++.++ .+ +| ++|+++...|. ++ ...++..|+
T Consensus 106 ~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~-~~~~~~~~g~~~~~Vi~~~~~h~-~~---~~~~~~~G~ 180 (497)
T 3mc6_A 106 RKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSA-KMYALHHRGITEPEIIAPVTAHA-GF---DKAAYYFGM 180 (497)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHH-HHHHHHHSCCSSCEEEEETTSCH-HH---HHHHHHSCC
T ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHH-HHHHHhcCCCCCceEEEeCCccH-HH---HHHHHHcCC
Confidence 57888999999999999733345999999999999999887 22 34 77665544443 22 445667899
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC----
Q 037063 250 RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS---- 324 (588)
Q Consensus 250 ~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~---- 324 (588)
+++.++++..++.+|+++|+++|+ +++++|++++++|+||.+.|+++| ++|+++|+++|+|+++...
T Consensus 181 ~~~~v~~~~~~~~~d~~~l~~~i~--------~~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f 252 (497)
T 3mc6_A 181 KLRHVELDPTTYQVDLGKVKKFIN--------KNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSF 252 (497)
T ss_dssp EEEEECBCTTTCSBCTTTTGGGCC--------SSEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGG
T ss_pred eEEEEecCcccCcCCHHHHHHHHh--------hCCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhh
Confidence 999999984378899999999987 679999999999999999999999 9999999999999997621
Q ss_pred -----C-CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCC--CceEeeecCCCcccccccccc
Q 037063 325 -----K-DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSV--STIMGIEPSFSEIIELETLDE 396 (588)
Q Consensus 325 -----~-d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~--~g~v~~~~~~~~~~~~~~~~~ 396 (588)
. .+.+++....++|++++|+||+++. |.|+|+++++++.+.......... .+.. .
T Consensus 253 ~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------------~---- 315 (497)
T 3mc6_A 253 MEKAGYKNLPLLDFRVPGVTSISCDTHKYGFA-PKGSSVIMYRNSDLRMHQYYVNPAWTGGLY------------G---- 315 (497)
T ss_dssp GTTTTCCSCCCCSTTSTTCCEEEEETTTTTCC-CSSCEEEECSSHHHHTTTSCCBTTCTTSCB------------C----
T ss_pred hhhhcccCCccccccCCCCcEEEECchhhcCC-CCCceeEEecCHHHHhhhhcccccccCCCc------------C----
Confidence 0 0113444455699999999997642 889999999987665432211110 0000 0
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE
Q 037063 397 SSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL 476 (588)
Q Consensus 397 ~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv 476 (588)
.+...|+.+...+ +++..+++.+...|++++.++...+++++.+.|.+. +++++++++ .+++++
T Consensus 316 -~~~~~g~~~~~~~---~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~--------~~g~~~~~~----~~~~~v 379 (497)
T 3mc6_A 316 -SPTLAGSRPGAIV---VGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQEN--------IPDLDIMGN----PRYSVI 379 (497)
T ss_dssp -CSSSCSSCBHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--------CTTCEECSC----CCSSEE
T ss_pred -CcCcccCCcchhH---HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc--------CCCEEEecC----CCeeEE
Confidence 0001233333222 566788888888788999999999999999999982 267888765 357888
Q ss_pred EEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHH
Q 037063 477 AFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTY 556 (588)
Q Consensus 477 ~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~ 556 (588)
.|...+ ++...+.+.|.++||.++.+..+ ..+|+++. .++.||++
T Consensus 380 ~~~~~~-----~~~~~l~~~L~~~Gi~v~~~~~~-----------------------------~~~ri~~~-~~t~e~i~ 424 (497)
T 3mc6_A 380 SFSSKT-----LNIHELSDRLSKKGWHFNALQKP-----------------------------VALHMAFT-RLSAHVVD 424 (497)
T ss_dssp EEECTT-----TTHHHHHHHHHTTTCBCEECCSS-----------------------------CCEEEECC-TTTTCTHH
T ss_pred EEeCCC-----CCHHHHHHHHHhCCEEEecCCCC-----------------------------CeEEEEEe-CCCHHHHH
Confidence 887654 56788888888899988755222 15788888 78999999
Q ss_pred HHHHHHHHhhhhh
Q 037063 557 RLWAFVSRFLDAD 569 (588)
Q Consensus 557 ~li~~l~~~l~~~ 569 (588)
++++.|+++++..
T Consensus 425 ~~~~~L~~~l~~~ 437 (497)
T 3mc6_A 425 EICDILRTTVQEL 437 (497)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988654
No 54
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.94 E-value=1.8e-25 Score=232.74 Aligned_cols=332 Identities=11% Similarity=0.052 Sum_probs=224.9
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
+..+|||+++.++.++.+++++.+.+.. +... .| ..++.++++++++
T Consensus 13 p~~i~l~~~~~~~~~~~v~~a~~~~~~~--~~~~-----------------------------~g--~~~~~~~~~~~l~ 59 (359)
T 1svv_A 13 PKPYSFVNDYSVGMHPKILDLMARDNMT--QHAG-----------------------------YG--QDSHCAKAARLIG 59 (359)
T ss_dssp --CEECSCSCSSCCCHHHHHHHHHHTTC--CCCS-----------------------------TT--CSHHHHHHHHHHH
T ss_pred CeeEEecCCCcCCCCHHHHHHHHHHHhh--cccc-----------------------------cc--ccHHHHHHHHHHH
Confidence 4689999999999999999998665521 1100 01 1467889999999
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHH
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKL 268 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l 268 (588)
+++|+++++ |+||+|+|+|+.+++.++ .++||+|++. ..|++ .... ..++..|++++.++.+ ++.+|+++|
T Consensus 60 ~~~g~~~~~--v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~-~~~~--~~~~~~g~~~~~v~~~--~~~~d~~~l 131 (359)
T 1svv_A 60 ELLERPDAD--VHFISGGTQTNLIACSLA-LRPWEAVIATQLGHIS-THET--GAIEATGHKVVTAPCP--DGKLRVADI 131 (359)
T ss_dssp HHHTCTTSE--EEEESCHHHHHHHHHHHH-CCTTEEEEEETTSHHH-HSST--THHHHTTCCEEEECCT--TSCCCHHHH
T ss_pred HHhCCCCcc--EEEeCCchHHHHHHHHHH-hCCCCEEEEcccchHH-HHHH--HHHhcCCCeeEEEeCC--CCeecHHHH
Confidence 999987654 999999999999999998 7899997654 44543 2211 1346689999999975 678999999
Q ss_pred HHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCC---cCCCCCCCCCCCC----CCC
Q 037063 269 MKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATA---LGSKDMDTLGLSL----FKP 337 (588)
Q Consensus 269 ~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~---~~~~d~~~l~l~~----~~~ 337 (588)
++++++. ......++++|+++++ |+||..+| +++| ++|+++|+++|+|+++ ..+. ...+... ..+
T Consensus 132 ~~~l~~~-~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~ 207 (359)
T 1svv_A 132 ESALHEN-RSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSS--PVNDLTLADIARLT 207 (359)
T ss_dssp HHHHHHS-CSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTS--TTCCCCHHHHHHHC
T ss_pred HHHHHHH-HhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcC--CCcchhhhhhhhcC
Confidence 9999720 0011125899999998 78999999 7778 9999999999999997 3331 1122111 247
Q ss_pred cEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHH
Q 037063 338 DFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVEC 417 (588)
Q Consensus 338 D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~ 417 (588)
|+++.|+||+.| |.|+|++++++++++.+.+....+ +. .+ ..+.+ .. +++
T Consensus 208 d~~~~s~~K~g~--~~~~g~l~~~~~~~~~~~~~~~~~-~~-------------------~~-~~~~~---~~---~~~- 257 (359)
T 1svv_A 208 DMFYIGATKAGG--MFGEALIILNDALKPNARHLIKQR-GA-------------------LM-AKGWL---LG---IQF- 257 (359)
T ss_dssp SEEEEECTTTTC--SSCEEEEECSGGGCTTHHHHHHHT-TC-------------------CC-TTTHH---HH---HHH-
T ss_pred CEEEEecccCCC--CCceEEEEEcccHHHHHHHHHhcC-Cc-------------------cc-ccchh---hH---HHH-
Confidence 999999999855 889999999988876665432110 10 00 00100 11 121
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHH
Q 037063 418 KGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLA 497 (588)
Q Consensus 418 ~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l 497 (588)
...+...+++++.++.+++++++.+.| +. +++++++|. .+.++.+.+. ..+.+.|
T Consensus 258 --~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~---------~~~~~~~~~----~~~~~~~~~~---------~~~~~~l 312 (359)
T 1svv_A 258 --EVLMKDNLFFELGAHSNKMAAILKAGL-EA---------CGIRLAWPS----ASNQLFPILE---------NTMIAEL 312 (359)
T ss_dssp --HHHTSTTHHHHHHHHHHHHHHHHHHHH-HH---------TTCCBSSCC----SSSEECBEEE---------HHHHHHH
T ss_pred --HHHHhhhhHHHHHHHHHHHHHHHHHHh-cc---------CCeEEccCC----ccceEEEEcC---------HHHHHHH
Confidence 122333346788899999999999999 43 345555542 3444444432 3455555
Q ss_pred HhC-CcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 498 DRH-NISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 498 ~~~-gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.++ ||.+. +... .+.++||+++++.++.+|++++++.|++++++
T Consensus 313 ~~~~gi~v~-~~~~--------------------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 313 NNDFDMYTV-EPLK--------------------------DGTCIMRLCTSWATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp TTTEECEEE-EEET--------------------------TTEEEEEEECCTTCCHHHHHHHHHHHHHC---
T ss_pred HHhcCEEEE-eccc--------------------------CCCceEEEEccCcCCHHHHHHHHHHHHHHHhc
Confidence 555 99882 2100 12238999999999999999999999988754
No 55
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.94 E-value=2.5e-25 Score=234.59 Aligned_cols=294 Identities=14% Similarity=0.083 Sum_probs=213.9
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEecc--C
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFA--W 258 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~--~ 258 (588)
.++|+.|++++++++++ |+||+|+|+|+.+++.++ +++||+|+ ....|++ . ...++..|++++.++.+ .
T Consensus 64 ~~l~~~la~~~~~~~~~--v~~~~g~~~a~~~~~~~~-~~~gd~Vl~~~~~~~~-~----~~~~~~~g~~~~~v~~~~~~ 135 (381)
T 1v2d_A 64 PALREALAEEFAVEPES--VVVTSGATEALYVLLQSL-VGPGDEVVVLEPFFDV-Y----LPDAFLAGAKARLVRLDLTP 135 (381)
T ss_dssp HHHHHHHHHHHTSCGGG--EEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCTT-H----HHHHHHTTCEEEEEECEEET
T ss_pred HHHHHHHHHhcCCChhh--EEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchh-H----HHHHHHcCCEEEEEeCCCCC
Confidence 48999999999998765 999999999999999998 88999965 4555654 2 23456789999999986 3
Q ss_pred CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCCCC-CCCCCCC
Q 037063 259 PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGSKD-MDTLGLS 333 (588)
Q Consensus 259 ~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~~d-~~~l~l~ 333 (588)
+++.+|+++|+++++ +++++|++++++|+||.++| +++| ++|+++|+++|+|+++..... ....++.
T Consensus 136 ~~~~~d~~~l~~~l~--------~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~ 207 (381)
T 1v2d_A 136 EGFRLDLSALEKALT--------PRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLR 207 (381)
T ss_dssp TEEECCHHHHHTTCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHH
T ss_pred ccCCcCHHHHHHhcC--------cCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHH
Confidence 456789999998887 67999999999999999998 6667 889999999999999764210 0111111
Q ss_pred --CCCCcEEEeccCccCCCCCCc--eEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccc
Q 037063 334 --LFKPDFLICSFYKIFGENPSG--FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISG 409 (588)
Q Consensus 334 --~~~~D~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~ 409 (588)
..+.|+++.|+||++| +.| +|++++++++++.+...... ...+.+...
T Consensus 208 ~~~~~~~~~~~s~sK~~~--~~G~r~G~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~ 259 (381)
T 1v2d_A 208 EFAPERTFTVGSAGKRLE--ATGYRVGWIVGPKEFMPRLAGMRQW--------------------------TSFSAPTPL 259 (381)
T ss_dssp HHCTTTEEEEEEHHHHTT--CGGGCCEEEECCTTTHHHHHHHHHH--------------------------HTSSCCHHH
T ss_pred HhcCCCEEEEeechhhcC--CcccceEEEEeCHHHHHHHHHHHhh--------------------------cccCCCcHH
Confidence 2358999999999998 446 89999998887665422100 011222222
Q ss_pred hhhHHHHHHHHHHHH-HhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCc
Q 037063 410 VSSKLVECKGLDHAD-ALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 410 ~~~~~al~~aL~~l~-~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i 488 (588)
. +++..+|+... ..+++++.++.+.+++++.+.|.++ +++++.+. .+.++.+.+.+ .
T Consensus 260 ~---~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~----~~~~~~~~~~~-----~ 317 (381)
T 1v2d_A 260 Q---AGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM----------GLRVYVPE----GTYFLMAELPG-----W 317 (381)
T ss_dssp H---HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT----------TCCEECCS----BSSEEEEECTT-----C
T ss_pred H---HHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC----------CCEecCCC----cceEEEEecCh-----H
Confidence 1 44556666542 2236888999999999999999884 34555542 24455566543 1
Q ss_pred CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 489 DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 489 ~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+ +.+++.++||.+++|..|... ..+..+||+|++. +.+||+++++.|++++++
T Consensus 318 ~---~~~~l~~~gi~v~~g~~~~~~----------------------~~~~~~iRi~~~~--~~~~i~~~~~~l~~~l~~ 370 (381)
T 1v2d_A 318 D---AFRLVEEARVALIPASAFYLE----------------------DPPKDLFRFAFCK--TEEELHLALERLGRVVNS 370 (381)
T ss_dssp C---HHHHHHHTCEECEEGGGGCSS----------------------SCCTTEEEEECCS--CHHHHHHHHHHHHHHC--
T ss_pred h---HHHHHHhCCEEEecchHhCCC----------------------CCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence 2 778889999999988665310 0122389999986 899999999999998765
No 56
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.94 E-value=3.1e-25 Score=239.02 Aligned_cols=306 Identities=18% Similarity=0.159 Sum_probs=208.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....+++|++|++++|++ +.|+|++| ++|+++++.++ +++||+|++....+...+.++...++..|+++++++.+
T Consensus 113 ~~~~~~l~~~lA~l~g~~---~~v~~~sG-~~Ai~~al~~l-~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 187 (445)
T 1qgn_A 113 NPTTVVLEEKISALEGAE---STLLMASG-MCASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA 187 (445)
T ss_dssp CHHHHHHHHHHHHHHTCS---EEEEESCH-HHHHHHHHHHH-SCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS
T ss_pred ChHHHHHHHHHHHHhCCC---cEEEeCCH-HHHHHHHHHHH-hCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence 567889999999999984 23555555 59999999988 88999976544444435555444567789999999864
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcc-eEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKR-GLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t-~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
|+++|+++|+ ++| ++|++++++|++|.+.|+++| ++|+++|+++++|+++..+....+++ +
T Consensus 188 ------d~~~l~~ai~--------~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~~~---~ 250 (445)
T 1qgn_A 188 ------DVGALELALN--------QKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALA---L 250 (445)
T ss_dssp ------CHHHHHHHHH--------HSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTT---T
T ss_pred ------CHHHHHHHhc--------cCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCccc---c
Confidence 7899999998 578 999999999999999999999 99999999999999988763223332 3
Q ss_pred CCcEEEeccCccCCCCCCc---eEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 336 KPDFLICSFYKIFGENPSG---FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G---~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
++|+++.|+||++| |.| +|++++++++++.+...... ..++.+....
T Consensus 251 g~Div~~S~sK~~g--g~gd~~~G~l~~~~~l~~~l~~~~~~--------------------------~g~~~~~~~a-- 300 (445)
T 1qgn_A 251 GADLVLHSATKFLG--GHNDVLAGCISGPLKLVSEIRNLHHI--------------------------LGGALNPNAA-- 300 (445)
T ss_dssp TCSEEEECTTTTTT--CSSSCCCEEEEECHHHHHHHHHHHHH--------------------------HCCCCCHHHH--
T ss_pred CCEEEEECCccccc--ccccceEEEEEECHHHHHHHHHHHHH--------------------------hCCCCCHHHH--
Confidence 49999999999999 666 99999998877665422100 0111221111
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCC------------CCcccEEEEE
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVM------------FDRGPSLAFN 479 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~------------~~rg~iv~f~ 479 (588)
+.+..+++.+ ....++....++++.+.|.++ |.+ +++.|..+ ...+++++|.
T Consensus 301 -~~~~~~l~~l-----~~r~~~~~~~a~~l~~~L~~~---------p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~ 365 (445)
T 1qgn_A 301 -YLIIRGMKTL-----HLRVQQQNSTALRMAEILEAH---------PKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFE 365 (445)
T ss_dssp -HHHHHHGGGH-----HHHHHHHHHHHHHHHHHHHTC---------TTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEE
T ss_pred -HHHHHhHHHH-----HHHHHHHHHHHHHHHHHHhcC---------CCceEEECCCCCCCchHHHHHHhccCCCcEEEEE
Confidence 1222344433 222333344467777778763 556 67766321 1257899999
Q ss_pred eecCCCCCcCHHHHHHHHHhC---CcEeccccccCcccccchHH---HHHHHHhhhcCCCCCcCCc--cEEEEecCCCCC
Q 037063 480 VFDWNGTRIDPALVQKLADRH---NISLSCGFLQNIFFSGEYEQ---ERVRVLETRSGTNETRSGV--SVVTAALGCLTN 551 (588)
Q Consensus 480 ~~~~~g~~i~~~~v~~~l~~~---gI~v~~G~~c~~~~~~~~~~---~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~~t 551 (588)
+.+ ..+...+++++. +|.++.|..|+......... .....+.. .|. +.||+|+|
T Consensus 366 l~~------~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~--------~g~~~~~iRlSvG---- 427 (445)
T 1qgn_A 366 VDG------DLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAK--------YGIMDNLVRFSFG---- 427 (445)
T ss_dssp ESS------CHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHT--------TTCCSSEEEEECC----
T ss_pred ECC------CHHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHh--------cCCCCCeEEEEec----
Confidence 875 134455555554 78889998886421110000 00011111 333 39999999
Q ss_pred HHHHHHHHHHHHHhhhh
Q 037063 552 FEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 552 ~eDv~~li~~l~~~l~~ 568 (588)
.||++.+++.|++.+++
T Consensus 428 ~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 428 VEDFDDLKADILQALDS 444 (445)
T ss_dssp SSCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhh
Confidence 47999999999988763
No 57
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.94 E-value=1.4e-24 Score=232.13 Aligned_cols=322 Identities=11% Similarity=0.045 Sum_probs=211.9
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+++|+++++++|++ .++||+|+|+|+++++.++ +++||+|+ ....|++ .+..+...++..|++++.++.
T Consensus 55 ~~~~~~l~~~la~~~g~~----~~~~~~~gt~a~~~al~~l-~~~gd~vi~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~ 128 (412)
T 2cb1_A 55 DPTAKALEERLKALEGAL----EAVVLASGQAATFAALLAL-LRPGDEVVAAKGLFGQ-TIGLFGQVLSLMGVTVRYVDP 128 (412)
T ss_dssp CHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHTT-CCTTCEEEEETTCCHH-HHHHHHHTTTTTTCEEEEECS
T ss_pred ChHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEeCCCchh-HHHHHHHHHHHcCCEEEEECC
Confidence 466789999999999984 3999999999999999998 89999965 5666765 333323445678999999875
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC-CCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS-KDMDTLGLSL 334 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~-~d~~~l~l~~ 334 (588)
+ +++|+++|+ +++++|++++++|++|.+.|+++| ++|+++|+++|+|+++..+ ....+++
T Consensus 129 ~-------~~~l~~~i~--------~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~--- 190 (412)
T 2cb1_A 129 E-------PEAVREALS--------AKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLA--- 190 (412)
T ss_dssp S-------HHHHHHHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGG---
T ss_pred C-------HHHHHHHhc--------cCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCccc---
Confidence 3 788999887 689999999999999999999999 9999999999999998876 3333332
Q ss_pred CCCcEEEeccCccCCCCCCc-eEEEEEeCcchh-----cccCCCCCCCceEeeecCCCccccccccccccc--ccCCCCC
Q 037063 335 FKPDFLICSFYKIFGENPSG-FGCLFVKKSSAS-----VLSGSTSSVSTIMGIEPSFSEIIELETLDESSQ--SKFPESS 406 (588)
Q Consensus 335 ~~~D~vv~S~~K~~G~~P~G-~G~L~v~~~~~~-----~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f--~e~GT~~ 406 (588)
..+|+++.|+||++|. |.+ +|++++.++... .+.+.... |....... +...+..+ .+.+ ...|. .
T Consensus 191 ~~~di~~~S~~K~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~--~~~~~~~~-~r~~~~~~~g~-~ 263 (412)
T 2cb1_A 191 WGAHVVVESLTKWASG-HGSVLGGAVLSRETELWRNYPQFLQPDLK--GQIPWEAL--RARCFPER-VRTLGLSLCGM-A 263 (412)
T ss_dssp GTCSEEEEETTTTTTC-SSCCCCEEEEECCCSGGGGSGGGGCC---------HHHH--GGGHHHHH-HHHHHTTTTCC-C
T ss_pred cCCeEEEECCcccccC-CCCcEEEEEEecccccccccccccccccc--ccchhhcc--chHHHHHH-HHHHHHHhcCC-C
Confidence 3489999999998874 555 888888774321 12221111 11100000 00000000 0001 01222 1
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEE-EeCCCCC------------CCcc
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVR-IYGPKVM------------FDRG 473 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~-i~~p~~~------------~~rg 473 (588)
.... +...++..++. ++...++...+++++.+.|.+. +++. +++|... ...+
T Consensus 264 ~~~~----~a~~~~~~l~~--l~~~~~~~~~~~~~l~~~L~~~---------~~v~~v~~p~~~~~p~~~~~~~~~~~~~ 328 (412)
T 2cb1_A 264 LSPF----NAYLLFQGLET--VALRVARMSETARFLAERLQGH---------PKVKALRYPGLPEDPAHRNARKYLASGG 328 (412)
T ss_dssp CCHH----HHHHHHHHGGG--HHHHHHHHHHHHHHHHHHHHTC---------TTCSEEECTTSTTCTTHHHHHHHCSSSC
T ss_pred CChH----HhHHHHcCCch--HHHHHHHHHHHHHHHHHHHHcC---------CCeeEEECCCCCCCccHHHHHHhCCCCc
Confidence 1111 11112222222 3455566678889999999874 4554 5455321 1357
Q ss_pred cEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccc---------cccCcccccchHHHHHHHHhhhcCCCCCcCC--ccEE
Q 037063 474 PSLAFNVFDWNGTRIDPALVQKLADRHNISLSCG---------FLQNIFFSGEYEQERVRVLETRSGTNETRSG--VSVV 542 (588)
Q Consensus 474 ~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G---------~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g--~~~v 542 (588)
++++|.+ + +.+.+.+++++.||.+ .| ++|......... ...+.. .| .+.|
T Consensus 329 ~iv~~~~-~------~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~---~~~~~~--------~g~~~~~i 389 (412)
T 2cb1_A 329 PILTLDL-G------DLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLK---EEARLQ--------AGVTPGLV 389 (412)
T ss_dssp SEEEEEC-S------SHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSC---HHHHHH--------TTCCTTEE
T ss_pred eEEEEEe-C------CHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCC---HHHHHh--------cCCCCCeE
Confidence 8999998 4 2678889999999999 87 456433211000 011111 23 2499
Q ss_pred EEecCCCCCHHHHHHHHHHHHH
Q 037063 543 TAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 543 RvSlg~~~t~eDv~~li~~l~~ 564 (588)
|+|+|.+++.++|++++++|++
T Consensus 390 R~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 390 RVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp EEECCSSCHHHHHHHHHHHHHC
T ss_pred EEEeccCCHHHHHHHHHHHHhh
Confidence 9999999999999999999864
No 58
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.94 E-value=1.1e-24 Score=231.29 Aligned_cols=342 Identities=10% Similarity=0.068 Sum_probs=235.7
Q ss_pred CCeeeecCCCCCCC----CHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHH
Q 037063 110 NNYVCFDYIGHGLF----SYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIR 185 (588)
Q Consensus 110 ~~~vyLD~a~~gl~----~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r 185 (588)
++..|+|.++..++ ++.+++++.+.+.. ++++++ .+...+|. .....++|
T Consensus 43 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~--~~~~~~----------------------~~~~~~g~--~~~~~~l~ 96 (401)
T 1fc4_A 43 DGSHVINFCANNYLGLANHPDLIAAAKAGMDS--HGFGMA----------------------SVRFICGT--QDSHKELE 96 (401)
T ss_dssp TSCEEEECCCSCTTSCTTCHHHHHHHHHHHHH--HCSCCC----------------------SCHHHHCC--BHHHHHHH
T ss_pred CCccEEEeeccCcccccCCHHHHHHHHHHHHH--hCCCCC----------------------CCCcccCC--cHHHHHHH
Confidence 46678898876554 67888887655532 122110 00111111 35678999
Q ss_pred HHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCH
Q 037063 186 KRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHS 265 (588)
Q Consensus 186 ~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~ 265 (588)
+.|++++|++ + .++++++|+|+.+++.++ +++||+|++....|.... ..++..|++++.++. +|.
T Consensus 97 ~~la~~~g~~--~--~i~~~sGs~a~~~~~~~~-~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~------~d~ 161 (401)
T 1fc4_A 97 QKLAAFLGME--D--AILYSSCFDANGGLFETL-LGAEDAIISDALNHASII----DGVRLCKAKRYRYAN------NDM 161 (401)
T ss_dssp HHHHHHHTCS--E--EEEESCHHHHHHTTHHHH-CCTTCEEEEETTCCHHHH----HHHHTSCSEEEEECT------TCH
T ss_pred HHHHHHhCCC--c--EEEeCChHHHHHHHHHHH-cCCCCEEEEcchhHHHHH----HHHHHcCCceEEECC------CCH
Confidence 9999999985 2 456666788999988888 889999776554443222 345678999988863 478
Q ss_pred HHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCC---CCC----CCCCCCCC
Q 037063 266 GKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKD---MDT----LGLSLFKP 337 (588)
Q Consensus 266 e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d---~~~----l~l~~~~~ 337 (588)
++|+++|++. .....++++|++++++|+||..+|+++| ++|+++|+++|+|+++..+.. -.. +++.. .+
T Consensus 162 ~~l~~~l~~~--~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~ 238 (401)
T 1fc4_A 162 QELEARLKEA--REAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RV 238 (401)
T ss_dssp HHHHHHHHHH--HHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CC
T ss_pred HHHHHHHHHh--hccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CC
Confidence 9999988721 0001168999999999999999999999 999999999999999864421 000 34332 47
Q ss_pred cEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHH
Q 037063 338 DFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVEC 417 (588)
Q Consensus 338 D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~ 417 (588)
|+++.|+||+++. +.| |++++++++++.+...... + .+ .++.+.... +++.
T Consensus 239 di~~~s~sK~~~~-~~g-G~~~~~~~~~~~l~~~~~~----------------~------~~--~~~~~~~~~---~a~~ 289 (401)
T 1fc4_A 239 DIITGTLGKALGG-ASG-GYTAARKEVVEWLRQRSRP----------------Y------LF--SNSLAPAIV---AASI 289 (401)
T ss_dssp SEEEEESSSTTCS-SSC-EEEEECHHHHHHHHHHCHH----------------H------HH--SCCCCHHHH---HHHH
T ss_pred cEEEecchhhccC-CCC-EEEEcCHHHHHHHHHhCcC----------------c------ee--CCCCCHHHH---HHHH
Confidence 9999999998832 556 9999988877665432100 0 00 123333332 4556
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHH
Q 037063 418 KGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLA 497 (588)
Q Consensus 418 ~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l 497 (588)
.+|+.+.. .+.+.++.+++++++.+.|.++ | ++++ + ..++++.+.+.+. .+...+.+.|
T Consensus 290 ~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~-------g---~~~~-~----~~~~~~~~~~~~~----~~~~~l~~~l 348 (401)
T 1fc4_A 290 KVLEMVEA--GSELRDRLWANARQFREQMSAA-------G---FTLA-G----ADHAIIPVMLGDA----VVAQKFAREL 348 (401)
T ss_dssp HHHHHHHT--CHHHHHHHHHHHHHHHHHHHHT-------T---CCBC-C----SSSSEEEEEEECH----HHHHHHHHHH
T ss_pred HHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-------C---Cccc-C----CCCCEEEEEcCCh----HHHHHHHHHH
Confidence 77777654 3788899999999999999985 2 3333 2 3577888887531 2355677777
Q ss_pred HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 498 DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 498 ~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.++||.++.|..|.. ..+...+|++++.+++.+|++++++.|++++++
T Consensus 349 ~~~gi~v~~~~~~~~-----------------------~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 396 (401)
T 1fc4_A 349 QKEGIYVTGFFYPVV-----------------------PKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQ 396 (401)
T ss_dssp HHTTEECCEECTTSS-----------------------CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHCCcEEeeecCCCC-----------------------CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 778999998765420 012238999999999999999999999998765
No 59
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.94 E-value=7.7e-25 Score=231.71 Aligned_cols=342 Identities=11% Similarity=0.056 Sum_probs=235.9
Q ss_pred CeeeecCCCCCCC----CHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHH
Q 037063 111 NYVCFDYIGHGLF----SYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRK 186 (588)
Q Consensus 111 ~~vyLD~a~~gl~----~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~ 186 (588)
+.-|+|.++..++ ++.+.+++.+.+.. ++++.+ .+...+|. .+..+++|+
T Consensus 42 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~--~~~~~~----------------------~~~~~~g~--~~~~~~l~~ 95 (399)
T 3tqx_A 42 EKEVLNFCANNYLGLADHPALIKTAQTVVEQ--YGFGMA----------------------SVRFICGT--QTIHKELEK 95 (399)
T ss_dssp TEEEEECSSCCTTSCTTCHHHHHHHHHHHHH--HCSCCC----------------------SCCCCCCC--BHHHHHHHH
T ss_pred CeeEEEeeccCcccccCCHHHHHHHHHHHHH--hCCCCC----------------------CcCccccC--chHHHHHHH
Confidence 4568888887543 46777777655533 222210 01111222 467789999
Q ss_pred HHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHH
Q 037063 187 RIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSG 266 (588)
Q Consensus 187 ~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e 266 (588)
.+++++|.+ . .++++++|+|+.+++.++ +++||+|++....|... ...++..|++++.++. +|++
T Consensus 96 ~la~~~~~~---~-~i~~~sGt~a~~~~l~~~-~~~gd~v~~~~~~~~~~----~~~~~~~g~~~~~~~~------~d~~ 160 (399)
T 3tqx_A 96 DISEFLGTD---D-TILYSSCFDANGGLFETL-LGPEDAIISDELNHASI----IDGIRLCKAQRYRYKN------NAMG 160 (399)
T ss_dssp HHHHHHTCS---E-EEEESCHHHHHHTTHHHH-CCTTCEEEEETTCCHHH----HHHHHSCCSEEEEECT------TCTT
T ss_pred HHHHHHCCC---c-EEEECchHHHHHHHHHHh-cCCCCEEEECCcccHHH----HHHHHHcCCceeEeCC------CCHH
Confidence 999999984 2 444455688999998888 89999977655554422 3455778999998875 3678
Q ss_pred HHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC-CCC------CCCCCCCCCc
Q 037063 267 KLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK-DMD------TLGLSLFKPD 338 (588)
Q Consensus 267 ~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~-d~~------~l~l~~~~~D 338 (588)
+|+++++.. .....++++|++++++|+||.++|+++| ++|+++|+++|+|+++..+. ... ..++ ...+|
T Consensus 161 ~l~~~l~~~--~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~d 237 (399)
T 3tqx_A 161 DLEAKLKEA--DEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGV-ADRVD 237 (399)
T ss_dssp HHHHHHHHH--HTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTC-TTCCS
T ss_pred HHHHHHHhh--hccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCC-CCCCc
Confidence 899988721 0111279999999999999999999999 99999999999999985441 111 1111 12479
Q ss_pred EEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHH
Q 037063 339 FLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECK 418 (588)
Q Consensus 339 ~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~ 418 (588)
+++.|+||++| ++.| |+++.++++++.+...... +...++.+.... +++..
T Consensus 238 i~~~s~sK~~~-g~~g-G~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~---~~~~~ 288 (399)
T 3tqx_A 238 ILTGTLGKALG-GASG-GYTSGHKEIIEWLRNRSRP------------------------YLFSNTVAPVIV---ATSLK 288 (399)
T ss_dssp EEEEESSSSSC-SSCC-EEEEECHHHHHHHHHHCHH------------------------HHSSCCCCHHHH---HHHHH
T ss_pred EEEecchHhcc-cCce-EEEEcCHHHHHHHHHhCcc------------------------eeccCCCcHHHH---HHHHH
Confidence 99999999888 3667 9999999887766432110 001223443332 45556
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHH
Q 037063 419 GLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLAD 498 (588)
Q Consensus 419 aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~ 498 (588)
+++.+. .+++++.++.+++++++.+.|.++ | ++++. ..++++.+.+.+. .+...+.+.|.
T Consensus 289 ~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-------g---~~~~~-----~~~~~~~~~~~~~----~~~~~~~~~l~ 348 (399)
T 3tqx_A 289 VLELLK-TEGPQLRKQLQENSRYFRAGMEKL-------G---FQLVP-----GNHPIIPVMLGDA----QLATNMADHLL 348 (399)
T ss_dssp HHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH-------T---CCBCC-----CSSSEEEEEEECH----HHHHHHHHHHH
T ss_pred HHHHHh-hccHHHHHHHHHHHHHHHHHHHHc-------C---CCcCC-----CCCCEEEEEeCCH----HHHHHHHHHHH
Confidence 777664 357899999999999999999986 2 23332 3567888877641 23556777777
Q ss_pred hCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 499 RHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 499 ~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
++||.++++.+... ..+..+||+|++++++.||++++++.|++++++
T Consensus 349 ~~gi~v~~~~~~~~-----------------------~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 395 (399)
T 3tqx_A 349 QEGIYVVGFSYPVV-----------------------PMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKK 395 (399)
T ss_dssp HTTEECCEECTTTS-----------------------CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEeeeCCCCC-----------------------CCCCceEEEEeecCCCHHHHHHHHHHHHHHHHH
Confidence 78999987643210 023349999999999999999999999998865
No 60
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.94 E-value=1.2e-24 Score=229.55 Aligned_cols=353 Identities=10% Similarity=0.089 Sum_probs=236.8
Q ss_pred hHHHHHhhhccCCCCCCeeeecCCCCC-CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCccccccccccccccccc
Q 037063 95 QADRIRAQDYFHLSLNNYVCFDYIGHG-LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQY 173 (588)
Q Consensus 95 ~~~~iR~~~f~~l~~~~~vyLD~a~~g-l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 173 (588)
.+|... ++|.. .+.+.|..+... +.|+.+.+++.+.+.....+ |
T Consensus 21 ~~d~~~-~~~~~---~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~-------------------------------y 65 (391)
T 4dq6_A 21 KWSEME-KKYGT---NDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYG-------------------------------Y 65 (391)
T ss_dssp HHHCHH-HHHSC---SCSEECCSSSCSSCCCHHHHHHHHHHHTTCCCC-------------------------------C
T ss_pred eeeecc-cccCC---CCceeccccCCCCCCCHHHHHHHHHHHhCCCCC-------------------------------C
Confidence 344444 34641 567788876655 44577888876555321110 1
Q ss_pred CCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEE
Q 037063 174 GSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSS 253 (588)
Q Consensus 174 g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~ 253 (588)
+....++.+++++.+++++|.+.+...|++|+|+|+|+.+++.++ +++||+|++....+... ...++..|++++.
T Consensus 66 ~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~~~~~~~----~~~~~~~g~~~~~ 140 (391)
T 4dq6_A 66 TTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINEL-TKANDKIMIQEPVYSPF----NSVVKNNNRELII 140 (391)
T ss_dssp BCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHH-SCTTCEEEECSSCCTHH----HHHHHHTTCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCCHHH----HHHHHHcCCeEEe
Confidence 111267888999999999994322335999999999999999999 89999977554433312 3455678999999
Q ss_pred Eecc-CC--CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcCCC-
Q 037063 254 AEFA-WP--NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALGSK- 325 (588)
Q Consensus 254 v~~~-~~--~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~~~- 325 (588)
++++ +. ++.+|+++|+++++ + +++|++++++|+||.++|.++ | ++|+++|+++|+|+++....
T Consensus 141 ~~~~~~~~~~~~~d~~~l~~~l~--------~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 211 (391)
T 4dq6_A 141 SPLQKLENGNYIMDYEDIENKIK--------D-VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIIL 211 (391)
T ss_dssp CCCEECTTSCEECCHHHHHHHCT--------T-EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBC
T ss_pred eeeeecCCCceEeeHHHHHHHhh--------c-CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeecccccccc
Confidence 9987 33 34589999999998 5 999999999999999977555 5 77999999999999976521
Q ss_pred C-CCCCCCCCC-----CCcEEEeccCccCCCCCCceEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccc
Q 037063 326 D-MDTLGLSLF-----KPDFLICSFYKIFGENPSGFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESS 398 (588)
Q Consensus 326 d-~~~l~l~~~-----~~D~vv~S~~K~~G~~P~G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~ 398 (588)
+ .....+... ...+++.|++|.+|.++.++|++++++ ++++.+......
T Consensus 212 ~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~------------------------ 267 (391)
T 4dq6_A 212 KKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTR------------------------ 267 (391)
T ss_dssp TTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHH------------------------
T ss_pred CCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHHHh------------------------
Confidence 0 011111111 133889999998884334589999887 666555432110
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE-
Q 037063 399 QSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA- 477 (588)
Q Consensus 399 f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~- 477 (588)
+ ..++++.... +++..+++...+. ++++.++.+.+++++.+.|.+. .|+++++.+ .++++.
T Consensus 268 ~-~~~~~~~~~~---~a~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~--------~~~~~~~~~-----~~~~~~~ 329 (391)
T 4dq6_A 268 I-DIKRNNCFSL---VATEASYNNGESW-LESFLEYLESNIDFAIKYINEN--------MPKLKVRKP-----EGTYLLW 329 (391)
T ss_dssp T-TCCCCCHHHH---HHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHH--------CTTSEECCC-----SBSSEEE
T ss_pred h-cCCCCCHHHH---HHHHHHHhchHHH-HHHHHHHHHHHHHHHHHHHHhh--------CCCCEecCC-----CccEEEE
Confidence 0 1123333332 3444555543332 6788889999999999999873 356777654 334444
Q ss_pred EEeecCCCCCcCHHHHHHHHHhC-CcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHH
Q 037063 478 FNVFDWNGTRIDPALVQKLADRH-NISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTY 556 (588)
Q Consensus 478 f~~~~~~g~~i~~~~v~~~l~~~-gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~ 556 (588)
+.+.... ++...+.+.|.++ ||.+++|..|.. .+..++|+|++ ++.|||+
T Consensus 330 ~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~~~~------------------------~~~~~iRis~~--~~~~~i~ 380 (391)
T 4dq6_A 330 VDFSALG---LSDEELESILVQKGKVALNQGNSFGI------------------------GGSGYQRINLA--CPRSMLE 380 (391)
T ss_dssp EECGGGC---CCHHHHHHHHHHTTCEECEEGGGGCT------------------------TCTTEEEEECC--SCHHHHH
T ss_pred EEhhhcC---CCHHHHHHHHHHhCCEEeeCchhhCC------------------------CCCCeEEEEEc--CCHHHHH
Confidence 5555311 4577777766666 999999866531 12239999988 6899999
Q ss_pred HHHHHHHHhhh
Q 037063 557 RLWAFVSRFLD 567 (588)
Q Consensus 557 ~li~~l~~~l~ 567 (588)
++++.|+++++
T Consensus 381 ~~l~~l~~~l~ 391 (391)
T 4dq6_A 381 EALIRIKNAIN 391 (391)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999998763
No 61
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.94 E-value=1.4e-24 Score=230.32 Aligned_cols=298 Identities=11% Similarity=0.067 Sum_probs=215.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
.+..+++++.+++++|++ .+++|+|+|+|+.+++.++ +++||+|++....|... ...++..|++++.++.
T Consensus 87 ~~~~~~l~~~la~~~g~~----~v~~~~ggt~a~~~~~~~~-~~~gd~V~~~~p~~~~~----~~~~~~~g~~~~~v~~- 156 (398)
T 3a2b_A 87 LDIHVELEEKLSAYVGKE----AAILFSTGFQSNLGPLSCL-MGRNDYILLDERDHASI----IDGSRLSFSKVIKYGH- 156 (398)
T ss_dssp CHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHS-SCTTCEEEEETTCCHHH----HHHHHHSSSEEEEECT-
T ss_pred cHHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEECCccCHHH----HHHHHHcCCceEEeCC-
Confidence 467889999999999973 4999999999999999999 89999977655544422 2345668999998875
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC-CCCCCCCC-CC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS-KDMDTLGL-SL 334 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~-~d~~~l~l-~~ 334 (588)
+|.++|+++++. ....++++|++++++|+||.+.|+++| ++|+++|+++|+|+++..+ .+.....+ +.
T Consensus 157 -----~d~~~l~~~l~~----~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 227 (398)
T 3a2b_A 157 -----NNMEDLRAKLSR----LPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASH 227 (398)
T ss_dssp -----TCHHHHHHHHHT----SCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHH
T ss_pred -----CCHHHHHHHHHh----hccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhh
Confidence 478999999972 111178999999999999999999999 9999999999999998644 11101111 10
Q ss_pred ----CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 335 ----FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 335 ----~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
.++|+++.|+||++| |.| |++++++++++.+...... +...++++..+.
T Consensus 228 ~~~~~~~di~~~s~sK~~~--~~G-G~~~~~~~~~~~l~~~~~~------------------------~~~~~~~~~~~~ 280 (398)
T 3a2b_A 228 FGLNDDVDLIMGTFSKSLA--SLG-GFVAGDADVIDFLKHNARS------------------------VMFSASMTPASV 280 (398)
T ss_dssp HTCGGGCSEEEEESSSTTC--SSC-EEEEECHHHHHHHHHHCHH------------------------HHSSBCCCHHHH
T ss_pred cCCCcCCeEEEeccccccc--CCC-cEEEeCHHHHHHHHHhccc------------------------ceecCCCCHHHH
Confidence 137999999999999 778 9999998877765432100 001122333332
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCH
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDP 490 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~ 490 (588)
+++..+|+.++. ++++.++.+++++++.+.|.++ | ++++.+ .+.++.+.+.+ + .+.
T Consensus 281 ---a~~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~-------g---~~~~~~-----~g~~~~~~~~~--~--~~~ 336 (398)
T 3a2b_A 281 ---ASTLKALEIIQN--EPEHIEKLWKNTDYAKAQLLDH-------G---FDLGAT-----ESPILPIFIRS--N--EKT 336 (398)
T ss_dssp ---HHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHHHHT-------T---CCBCSC-----CSSEEEEECCC--H--HHH
T ss_pred ---HHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHhc-------C---CCcCCC-----CCCEEEEEcCC--H--HHH
Confidence 344567776543 3678888899999999999885 2 333332 36777777642 1 335
Q ss_pred HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 491 ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 491 ~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
..+.+.|.++||.++.|..|... .+.++||+|++.+++.||++++++.|++++++
T Consensus 337 ~~l~~~l~~~gi~v~~~~~~~~~-----------------------~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 391 (398)
T 3a2b_A 337 FWVTKMLQDDGVFVNPVVSPAVP-----------------------AEESLIRFSLMATHTYDQIDEAIEKMVKVFKQ 391 (398)
T ss_dssp HHHHHHHHHTTEECEEECTTTSC-----------------------GGGCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCcEEEeeCCCCCC-----------------------CCCceEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 56666666679999988655210 11238999999999999999999999998764
No 62
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.94 E-value=9e-25 Score=240.27 Aligned_cols=305 Identities=12% Similarity=0.057 Sum_probs=229.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceE--EEecCHHHHHHHHHHhCCCCCC--------CeEEEc-CCCchhHHHHHHHHHHh
Q 037063 178 SELESKIRKRIMDFMNISEDDYTL--VFTANQSSAFKLLAESYPFYSN--------PRLLTV-YDHENEAAALMIESSKK 246 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~v--vft~g~T~al~lv~~s~~~~~g--------d~ll~~-~e~~s~~~~~~~~~a~~ 246 (588)
.++++++++++++++|++++...+ +||+|+|+|+.+++.++ .++| |+|++. ..|++ . ...++.
T Consensus 138 ~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~-~~~g~~~~g~~~d~Vi~~~~~~~~-~----~~~~~~ 211 (514)
T 3mad_A 138 AKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTY-RDWARATKGITAPEAVVPVSAHAA-F----DKAAQY 211 (514)
T ss_dssp HHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHH-HHHHHHHHCCSSCEEEEETTSCTH-H----HHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCccchH-H----HHHHHH
Confidence 577788999999999997521236 99999999999999987 4554 786654 45543 2 345566
Q ss_pred cCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC-
Q 037063 247 RGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS- 324 (588)
Q Consensus 247 ~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~- 324 (588)
.|++++.++++ +++.+|+++|+++|+ +++++|++++++|+||.+.|+++| ++|+++|+++|+|+++...
T Consensus 212 ~G~~v~~v~~~-~~~~~d~~~Le~~i~--------~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~ 282 (514)
T 3mad_A 212 FGIKLVRTPLD-ADYRADVAAMREAIT--------PNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFI 282 (514)
T ss_dssp HTCEEEEECBC-TTSCBCHHHHHHHCC--------TTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred cCCeeEEeeeC-CCCCCCHHHHHHHhc--------cCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEeccccccc
Confidence 79999999998 588999999999998 689999999999999999999999 9999999999999996532
Q ss_pred --------CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCC----CCCCCceEeeecCCCcccccc
Q 037063 325 --------KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGS----TSSVSTIMGIEPSFSEIIELE 392 (588)
Q Consensus 325 --------~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~----~~g~~g~v~~~~~~~~~~~~~ 392 (588)
.....++....++|++++|+||+++. |.|+|+++++++.+...... +.+ +.. .
T Consensus 283 ~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~-----------~- 347 (514)
T 3mad_A 283 LPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYG-AKGTSVILYRRPDLLHYQYFIAADWPG--GLY-----------F- 347 (514)
T ss_dssp HHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCC-CSSCEEEEESSHHHHTTTCEEESSCTT--CSE-----------E-
T ss_pred chhHHhcCCCCCcccccCCCCcEEEECchhccCC-CCCeEEEEEeCHHHhccccccccccCC--Ccc-----------c-
Confidence 11224454556689999999997442 88999999999765443211 111 110 0
Q ss_pred cccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCc
Q 037063 393 TLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDR 472 (588)
Q Consensus 393 ~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~r 472 (588)
.+...|+.+...+ +++..+++.+...|++++.+++..+++++.+.|.++ ++++++.+.
T Consensus 348 -----~~~~~gs~~~~~~---~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~~----- 405 (514)
T 3mad_A 348 -----SPTFAGSRPGALS---ATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAI---------PSLKILGDP----- 405 (514)
T ss_dssp -----ESSSCSSCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---------TTCEESSCC-----
T ss_pred -----CCccCCCCchHHH---HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhC---------CCeEEeCCC-----
Confidence 0002455554443 566788888877788999999999999999999984 567877653
Q ss_pred ccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecC-CCCC
Q 037063 473 GPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALG-CLTN 551 (588)
Q Consensus 473 g~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg-~~~t 551 (588)
.+++.|...+ ++...+.+.|.++||.+ .|..+ . ..+|+++. ..++
T Consensus 406 ~~~~~~~~~~-----~~~~~l~~~L~~~Gi~v-~g~~~--------------------------~--~~~Ri~~~~~~~~ 451 (514)
T 3mad_A 406 LWVIAVASDE-----LNIYQVMEEMAGRGWRL-NGLHR--------------------------P--PAFHVALTLRHTE 451 (514)
T ss_dssp SSEEEEECSS-----SCHHHHHHHHHTTTCBC-EEETT--------------------------T--TEEEEECCGGGGS
T ss_pred eEEEEEeCCC-----CCHHHHHHHHHhcCCEe-ccCCC--------------------------C--CeEEEEEecCCCC
Confidence 3477776543 55778888888889987 44222 1 27999998 4456
Q ss_pred HHHHHHHHHHHHHhhhh
Q 037063 552 FEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 552 ~eDv~~li~~l~~~l~~ 568 (588)
.|||+++++.|++.+++
T Consensus 452 ~e~i~~~l~~L~~~l~~ 468 (514)
T 3mad_A 452 PGVVDRFLADLQDAVAQ 468 (514)
T ss_dssp TTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 79999999999998865
No 63
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.94 E-value=7.8e-25 Score=235.01 Aligned_cols=316 Identities=9% Similarity=-0.083 Sum_probs=212.8
Q ss_pred HHHHHHHHHhC------CCCCCceEEEecCHHHHHHHHHHhCCC--CCCC--eEEE-cCCCchhHHHHHHHHHHhcCCEE
Q 037063 183 KIRKRIMDFMN------ISEDDYTLVFTANQSSAFKLLAESYPF--YSNP--RLLT-VYDHENEAAALMIESSKKRGARV 251 (588)
Q Consensus 183 ~~r~~ia~~lg------a~~~e~~vvft~g~T~al~lv~~s~~~--~~gd--~ll~-~~e~~s~~~~~~~~~a~~~G~~v 251 (588)
++|+.|+++++ ++++ .|+||+|+|+|+.+++.++ . ++|| +|++ ...|++ . ...++..|+++
T Consensus 86 ~lr~~la~~~~~~~g~~~~~~--~i~~t~g~t~al~~~~~~l-~~~~~gd~~~Vl~~~p~~~~-~----~~~~~~~g~~~ 157 (437)
T 3g0t_A 86 ELKQEASRFAKLFVNIDIPAR--ACVPTVGSMQGCFVSFLVA-NRTHKNREYGTLFIDPGFNL-N----KLQCRILGQKF 157 (437)
T ss_dssp HHHHHHHHHHHHHHCCCCCGG--GEEEESHHHHHHHHHHHHH-TTSCTTCSCCEEEEESCCHH-H----HHHHHHHTCCC
T ss_pred HHHHHHHHHHHHhhCCCCCcc--cEEEeCCHHHHHHHHHHHH-hcCCCCCccEEEEeCCCcHh-H----HHHHHHcCCEE
Confidence 56666766665 4444 4999999999999999998 5 8999 8665 444443 2 34556779999
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcCC-CC
Q 037063 252 SSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALGS-KD 326 (588)
Q Consensus 252 ~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~~-~d 326 (588)
+.++++..+..+|+++|++++.. +++++|++++++|+||..+|.++ | ++|+++|+++|+|+++... .+
T Consensus 158 ~~v~~~~~~~~~d~~~l~~~l~~-------~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~ 230 (437)
T 3g0t_A 158 ESFDLFEYRGEKLREKLESYLQT-------GQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFR 230 (437)
T ss_dssp EEEEGGGGCTTHHHHHHHHHHTT-------TCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTT
T ss_pred EEEeecCCCCccCHHHHHHHHhc-------CCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccC
Confidence 99999734446899999999931 67999999999999999999554 6 8899999999999997642 10
Q ss_pred -CCC--------CCCCC-CCCcEEEeccCccCCCCCCceEEEEEeCcchh-cccCCC---CCCCceEeeecCCCcccccc
Q 037063 327 -MDT--------LGLSL-FKPDFLICSFYKIFGENPSGFGCLFVKKSSAS-VLSGST---SSVSTIMGIEPSFSEIIELE 392 (588)
Q Consensus 327 -~~~--------l~l~~-~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~-~l~~~~---~g~~g~v~~~~~~~~~~~~~ 392 (588)
..+ ..+.. ...++++.|++|.+|.++.++|++++++++++ .+.... .++ +.. ...+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~ 301 (437)
T 3g0t_A 231 KDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGRL-RFG--------EALSS 301 (437)
T ss_dssp SCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSCS-BHH--------HHHHT
T ss_pred CCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhhhhhccccccccc-chh--------HHHHH
Confidence 111 12222 45779999999999842345999999988776 522111 110 000 00000
Q ss_pred cccccccccCCCCCccchhhHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCC--
Q 037063 393 TLDESSQSKFPESSISGVSSKLVECKGLDHADALG--LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKV-- 468 (588)
Q Consensus 393 ~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G--~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~-- 468 (588)
. .... ...+.+.... +++..+|+...... ++++.++++.+++++.+.|.++ +++++.+..
T Consensus 302 ~--~~~~-~~~~~~~~~~---~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~~~ 365 (437)
T 3g0t_A 302 S--ALYA-LSSGATHSAQ---WGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN----------GFNIVYDKDGN 365 (437)
T ss_dssp T--HHHH-HHSSSCHHHH---HHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT----------TEEESSCEETT
T ss_pred H--HHhh-hcCCCCHHHH---HHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCEEeccccCC
Confidence 0 0000 1223333332 44445565543211 7889999999999999999984 466661100
Q ss_pred -CCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecC
Q 037063 469 -MFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALG 547 (588)
Q Consensus 469 -~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg 547 (588)
+...+.++.+.+.+ ++...+.+.|.++||.+++|..|.. .....||+|++
T Consensus 366 ~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~gi~v~~~~~~~~------------------------~~~~~iRis~~ 416 (437)
T 3g0t_A 366 EPLADGFYFTVGYKG-----MDSSKLIEKFVRYGMCAITLKTTGS------------------------KRNEAMRICTS 416 (437)
T ss_dssp EECCSSSEEEEEETT-----CCHHHHHHHHHHTTEECEESTTTTC------------------------CCTTCEEEECS
T ss_pred CCCceeEEEEEecCC-----CCHHHHHHHHHHcCeEEeeccccCC------------------------CCCCEEEEEEe
Confidence 00235566667653 5677888888888999998866631 11127999999
Q ss_pred CCCCHHHHHHHHHHHHHhhhh
Q 037063 548 CLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 548 ~~~t~eDv~~li~~l~~~l~~ 568 (588)
. .+.+||+++++.|++++++
T Consensus 417 ~-~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 417 L-LPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp S-SCGGGHHHHHHHHHHHHHH
T ss_pred c-CCHHHHHHHHHHHHHHHhc
Confidence 4 4999999999999988753
No 64
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.94 E-value=1.5e-24 Score=228.18 Aligned_cols=305 Identities=12% Similarity=0.075 Sum_probs=212.2
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
.++.+++++.+++.+|.+.+...|+||+|+|+|+.+++.++ +++||+|++....+... ...++..|++++.++++
T Consensus 62 ~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~----~~~~~~~g~~~~~~~~~ 136 (383)
T 3kax_A 62 ENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAF-TKENESVLVQPPIYPPF----FEMVTTNNRQLCVSPLQ 136 (383)
T ss_dssp TTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHH-CCTTCEEEECSSCCHHH----HHHHHHTTCEEEECCCE
T ss_pred HHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHh-CCCCCEEEEcCCCcHHH----HHHHHHcCCEEEeccce
Confidence 46778999999999994323335999999999999999999 89999977654443312 34567789999999986
Q ss_pred CC--CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCcCCC------
Q 037063 258 WP--NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATALGSK------ 325 (588)
Q Consensus 258 ~~--~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~~~~------ 325 (588)
+. +..+|+++|+++++ +++++|++++++|+||..+|.+++ ++|+++|+++|+|+++....
T Consensus 137 ~~~~~~~~d~~~l~~~l~--------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~ 208 (383)
T 3kax_A 137 KQNDTYAIDFEHLEKQFQ--------QGVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTH 208 (383)
T ss_dssp EETTEEECCHHHHHHHHT--------TTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC
T ss_pred ecCCcEEEcHHHHHHHhC--------cCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCc
Confidence 32 23589999999997 789999999999999999997775 55999999999999976521
Q ss_pred -CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEE-eCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCC
Q 037063 326 -DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFV-KKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP 403 (588)
Q Consensus 326 -d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v-~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G 403 (588)
.+..++-.....++++.|++|.+|.++.++|++++ ++++++.+...... + ..+
T Consensus 209 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~------------------------~-~~~ 263 (383)
T 3kax_A 209 TPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYR------------------------Q-GFH 263 (383)
T ss_dssp CCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHH------------------------T-TCC
T ss_pred eeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhh------------------------c-ccC
Confidence 11111100013558999999988842345899988 45665555422110 0 111
Q ss_pred CCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE-EEeec
Q 037063 404 ESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA-FNVFD 482 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~-f~~~~ 482 (588)
+++..+. +++..+++...+. ++++.++.+.+++++.+.|.++ .|+++++.+ .++++. +.+..
T Consensus 264 ~~~~~~~---~a~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~--------~~~~~~~~~-----~~~~~~~~~~~~ 326 (383)
T 3kax_A 264 GLNIFAY---TAMQSAYTECNDW-LNEIRFYIEDNAKFACEYIKDH--------IPTLSVMKP-----EGSFLLWIDCSA 326 (383)
T ss_dssp CCCHHHH---HHHHHHTTTCHHH-HHHHHHHHHHHHHHHHHHHHHH--------CTTCEECCC-----SBSSEEEEECGG
T ss_pred CCCHHHH---HHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHhh--------CCCceEecC-----CceEEEEEEccc
Confidence 2333332 3444455432222 6778888999999999999873 356777654 344444 55543
Q ss_pred CCCCCcCHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHH
Q 037063 483 WNGTRIDPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAF 561 (588)
Q Consensus 483 ~~g~~i~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~ 561 (588)
. | ++...+.+.| +++||.+++|..|.. .+..++|+|++ ++.||++++++.
T Consensus 327 ~-~--~~~~~~~~~l~~~~gi~v~~g~~~~~------------------------~~~~~iRi~~~--~~~~~i~~~l~~ 377 (383)
T 3kax_A 327 L-N--LSQDERTKLLEEKGKIIVEPGEKYGL------------------------GGEEHIGINIG--CPRSVLEEILNR 377 (383)
T ss_dssp G-C--CCHHHHHHHHHHTSCEECEESGGGCT------------------------TCTTEEEEECS--SCHHHHHHHHHH
T ss_pred c-C--CCHHHHHHHHHhhCCEEeECchhhcC------------------------CCCCeEEEEEc--CCHHHHHHHHHH
Confidence 1 1 4566776666 479999999876631 12239999988 589999999999
Q ss_pred HHHhh
Q 037063 562 VSRFL 566 (588)
Q Consensus 562 l~~~l 566 (588)
|++++
T Consensus 378 l~~~l 382 (383)
T 3kax_A 378 LRHTF 382 (383)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98876
No 65
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.93 E-value=3.3e-25 Score=235.35 Aligned_cols=299 Identities=11% Similarity=0.071 Sum_probs=209.1
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhC-CCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESY-PFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~-~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.+..+++|+.|++++|.+ +.|+||+|++ ++..+...+ .+.+||+|++. ..|++ .. ..++..|++++.++
T Consensus 90 ~~~~~~l~~~la~~~~~~---~~i~~~sG~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~-~~----~~~~~~g~~~~~v~ 160 (401)
T 2bwn_A 90 TAYHRRLEAEIAGLHQKE---AALVFSSAYN-ANDATLSTLRVLFPGLIIYSDSLNHAS-MI----EGIKRNAGPKRIFR 160 (401)
T ss_dssp BHHHHHHHHHHHHHTTCS---EEEEESCHHH-HHHHHHHHHHHHSTTCEEEEETTCCHH-HH----HHHHHSCCCEEEEC
T ss_pred hHHHHHHHHHHHHHhCCC---cEEEECCcHH-HHHHHHHHHhcCCCCCEEEECchhhHH-HH----HHHHHcCCeEEEEc
Confidence 456789999999999973 4588877776 555554443 13589997654 45554 22 23456799999998
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC-CCCC----
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK-DMDT---- 329 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~-d~~~---- 329 (588)
.+ +.++|++++.. ...+++++|++++++|+||.+.|+++| ++|+++|+++|+|+++..+. ....
T Consensus 161 ~~------d~~~le~~l~~----~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~ 230 (401)
T 2bwn_A 161 HN------DVAHLRELIAA----DDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVA 230 (401)
T ss_dssp TT------CHHHHHHHHHH----SCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHH
T ss_pred CC------CHHHHHHHHHh----hccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceee
Confidence 64 67889988862 111478999999999999999999999 99999999999999988541 0011
Q ss_pred --CCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCc
Q 037063 330 --LGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSI 407 (588)
Q Consensus 330 --l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~ 407 (588)
.++. .++|+++.|++|.+|. .| |+++.++++++.+.....+ + .| ..|+++
T Consensus 231 ~~~~~~-~~~~i~~~s~sK~~~~--~G-G~~~~~~~~~~~l~~~~~~----------------~------~~-~~~~~~- 282 (401)
T 2bwn_A 231 ERDGLM-HRIDIFNGTLAKAYGV--FG-GYIAASARMVDAVRSYAPG----------------F------IF-STSLPP- 282 (401)
T ss_dssp HHHTCG-GGCSEEEEESSSTTCS--CC-EEEEECHHHHHHHHHHCHH----------------H------HT-SBCCCH-
T ss_pred eccCcc-ccCcEEEeechhhccC--CC-CEEecCHHHHHHHHHhCcC----------------c------ee-cCCCCH-
Confidence 1110 1368999999999993 46 8888887766544321100 0 22 344544
Q ss_pred cchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCC
Q 037063 408 SGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTR 487 (588)
Q Consensus 408 ~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~ 487 (588)
... +++.++++++.+.|++++.++.+.+++++.+.|.++ +++++.+ +++++.|.+.+ +
T Consensus 283 ~~~---~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~-----~~~~~~~~~~~--~-- 340 (401)
T 2bwn_A 283 AIA---AGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL----------GMPIIDH-----GSHIVPVVIGD--P-- 340 (401)
T ss_dssp HHH---HHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH----------TCCBCCC-----SSSCEEEECCC--H--
T ss_pred HHH---HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC----------CCcccCC-----CCCeEEEEeCC--h--
Confidence 222 566788888877677899999999999999999885 2344433 35688887753 1
Q ss_pred cCHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 488 IDPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 488 i~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
.+...+.+.| +++||.++.+.... . ..|...||+|++.+++.+||+++++.|++++
T Consensus 341 ~~~~~~~~~L~~~~gi~v~~~~~~~----------------~-------~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~ 397 (401)
T 2bwn_A 341 VHTKAVSDMLLSDYGVYVQPINFPT----------------V-------PRGTERLRFTPSPVHDLKQIDGLVHAMDLLW 397 (401)
T ss_dssp HHHHHHHHHHHHHHCEECCEECTTT----------------S-------CTTCCEEEECCCTTSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCCEEEeecCCCC----------------C-------CCCCceEEEEeeCCCCHHHHHHHHHHHHHHH
Confidence 3355666655 58899998763210 0 0122389999999999999999999999886
Q ss_pred hh
Q 037063 567 DA 568 (588)
Q Consensus 567 ~~ 568 (588)
+.
T Consensus 398 ~~ 399 (401)
T 2bwn_A 398 AR 399 (401)
T ss_dssp --
T ss_pred Hh
Confidence 53
No 66
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.93 E-value=1.4e-25 Score=231.89 Aligned_cols=309 Identities=14% Similarity=0.086 Sum_probs=200.6
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCC
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNL 261 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~ 261 (588)
++|+++++++|++ +.|++++| |+|+.+++.++ +++||+|+ ....|++ ....+..+++..|++++.++.
T Consensus 2 ~l~~~la~~~g~~---~~i~~~sG-~~a~~~~~~~~-~~~g~~v~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~----- 70 (331)
T 1pff_A 2 ALEGKIAKLEHAE---ACAATASG-MGAIAASVWTF-LKAGDHLISDDCLYGC-THALFEHQLRKFGVEVDFIDM----- 70 (331)
T ss_dssp HHHHHHHHHHTCS---EEEEESSH-HHHHHHHHHHH-CCTTCEEEEESCCCHH-HHHHHHTHHHHTTCEEEEECT-----
T ss_pred hHHHHHHHHhCCC---eEEEeCCh-HHHHHHHHHHh-cCCCCEEEEcCCCcch-HHHHHHHHHHhcCCEEEEeCC-----
Confidence 6889999999985 23555554 89999999988 88999965 5556665 333333445678999999875
Q ss_pred ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH-cCcEEEEeCCCcCCCCCCCCCCCCCCCcE
Q 037063 262 RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE-KGWHVLLDATALGSKDMDTLGLSLFKPDF 339 (588)
Q Consensus 262 ~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~-~g~~vvvDaa~~~~~d~~~l~l~~~~~D~ 339 (588)
+|.++++++++ +++++|++++++|+||..+|+++| ++|++ +|+++++|+++..+....++ .+++|+
T Consensus 71 -~d~~~l~~~i~--------~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~---~~~~d~ 138 (331)
T 1pff_A 71 -AVPGNIEKHLK--------PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPL---DLGVDI 138 (331)
T ss_dssp -TSTTHHHHTCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGG---GGTCSE
T ss_pred -CCHHHHHHhhc--------CCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChh---hcCCcE
Confidence 36788988887 689999999999999999999999 99999 99999999998775211122 234899
Q ss_pred EEeccCccCCCCCCc--eEEEEEeC-cchhcccCCCCC-CCceEeeecCCCcccccccccccccccCCCCCccchhhHHH
Q 037063 340 LICSFYKIFGENPSG--FGCLFVKK-SSASVLSGSTSS-VSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLV 415 (588)
Q Consensus 340 vv~S~~K~~G~~P~G--~G~L~v~~-~~~~~l~~~~~g-~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~a 415 (588)
++.|+||++|. |.+ +|++++++ ++++.+.+...+ + + ++.+.... ++
T Consensus 139 ~~~s~~K~~~~-~~~r~~G~~~~~~~~~~~~l~~~~~~~~-~-------------------------~~~~~~~~---~~ 188 (331)
T 1pff_A 139 VVHSATKYING-HTDVVAGLVCSRADIIAKVKSQGIKDIT-G-------------------------AIISPHDA---WL 188 (331)
T ss_dssp EEEETTTTTSS-SSSCCCEEEEECHHHHHHHHHTCCCCCC-C-------------------------CCCCHHHH---HH
T ss_pred EEEECccccCC-CCCceEEEEEeCcHHHHHHHHHHHHhhc-C-------------------------CCCCHHHH---HH
Confidence 99999998874 655 79999998 887777654432 1 1 01111111 22
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHH--HHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHH
Q 037063 416 ECKGLDHADALGLILISNRARYLINWLANA--LMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALV 493 (588)
Q Consensus 416 l~~aL~~l~~~G~~~i~~r~~~L~~~l~~~--L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v 493 (588)
+..+++.+... ++...+....+.+++.+. +.+..++.- ...++++++.+.. ..++++++|.+.+ .+.+
T Consensus 189 ~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~~~l~~~~~~~l-~~~~~~~~~~~~~-~~~~~~~~~~~~~-------~~~~ 258 (331)
T 1pff_A 189 ITRGTLTLDMR-VKRAAENAQKVAEFLHEHKAVKKVYYPGL-PDHPGHEIAKKQM-KMFGSMIAFDVDG-------LEKA 258 (331)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHCTTCCCEECTTS-TTSTTHHHHHHHC-SSCCSEEEEECSS-------HHHH
T ss_pred HHcCcchHHHH-HHHHHHHHHHHHHHHHcCCCeeEEECCCC-CCCccHHHHHhhC-CCCceEEEEEECC-------HHHH
Confidence 23455543321 344444444444444332 000000000 0122333333221 1357899998753 6778
Q ss_pred HHHHHhCCcEeccc---------cccCcccccchHHHHHHHHhhhcCCCCCcCC--ccEEEEecCCCCCHHHHHHHHHHH
Q 037063 494 QKLADRHNISLSCG---------FLQNIFFSGEYEQERVRVLETRSGTNETRSG--VSVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 494 ~~~l~~~gI~v~~G---------~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g--~~~vRvSlg~~~t~eDv~~li~~l 562 (588)
.+++++.||.++.+ ++|......... ...+.. .| .+.||+|+|.++|.+||++++++|
T Consensus 259 ~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~---~~~~~~--------~g~~~~~iRis~~~~~t~~~i~~l~~~l 327 (331)
T 1pff_A 259 KKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVP---KEEREA--------AGLTDNLIRLSVGCENVQDIIDDLKQAL 327 (331)
T ss_dssp HHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSC---HHHHHH--------TTCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred HHHHHhCCCceeccCCCCcceeeecchhhcccccC---HHHHHh--------cCCCCCeEEEEEecCCHHHHHHHHHHHH
Confidence 89999999977654 355321100000 000111 22 249999999999999999999998
Q ss_pred HHh
Q 037063 563 SRF 565 (588)
Q Consensus 563 ~~~ 565 (588)
+++
T Consensus 328 ~~~ 330 (331)
T 1pff_A 328 DLV 330 (331)
T ss_dssp HTC
T ss_pred HHh
Confidence 764
No 67
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.93 E-value=1.5e-24 Score=228.10 Aligned_cols=316 Identities=12% Similarity=0.046 Sum_probs=215.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+++|+.+++++|++ .++||+|+|+|+.+++.++.+++||+|+ ....|++ .. ..++..|++++.+++
T Consensus 35 ~~~~~~l~~~la~~~~~~----~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~-~~----~~~~~~g~~~~~~~~ 105 (373)
T 3frk_A 35 GDEDKKFEQEFADYCNVN----YCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIA-TA----LAVSYTGAKPIFVEP 105 (373)
T ss_dssp SHHHHHHHHHHHHHHTSS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTH-HH----HHHHHHSCEEEEECE
T ss_pred CchHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHH-HH----HHHHHcCCEEEEEec
Confidence 356789999999999984 3999999999999999998889999965 5666765 22 334567999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC--CCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK--DMDTLGLS 333 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~--d~~~l~l~ 333 (588)
+..++.+|+++|+++++ +++++|+ ++|+||...|+++| ++|+++|+++|+|+++..+. +...++.
T Consensus 106 ~~~~~~~d~~~l~~~l~--------~~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~- 173 (373)
T 3frk_A 106 DIRTYNIDPSLIESAIT--------EKTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGMKVGS- 173 (373)
T ss_dssp ETTTTEECGGGTGGGCC--------TTEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTS-
T ss_pred cccccCcCHHHHHHhcC--------CCCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCEeccc-
Confidence 86678899999998887 6788888 56789999999999 99999999999999988762 2222221
Q ss_pred CCCCcEEEeccC--ccCCCCC-CceEEEEEeCc-chhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccc
Q 037063 334 LFKPDFLICSFY--KIFGENP-SGFGCLFVKKS-SASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISG 409 (588)
Q Consensus 334 ~~~~D~vv~S~~--K~~G~~P-~G~G~L~v~~~-~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~ 409 (588)
-+|++++|++ |++| | ...|+++.+++ +.+.+++...++ .... +. .. ..|. ++..
T Consensus 174 --~~d~~~~S~~~~K~l~--~~g~gg~~~~~~~~~~~~~~~~~~~g-~~~~----------~~-----~~-~~g~-~~~~ 231 (373)
T 3frk_A 174 --LGDAAGFSFYPAKNLG--SLGDGGAVVTNDKDLAEKIKALSNYG-SEKK----------YH-----HI-YKGF-NSRL 231 (373)
T ss_dssp --SSSEEEEECCTTSSSC--CSSSCEEEEESCHHHHHHHHHHHBTT-CSBT----------TB-----CC-SCCC-BCCC
T ss_pred --cccEEEEeCcCCCccC--ccceeEEEEeCCHHHHHHHHHHHhcC-cccC----------Cc-----cc-cccc-cCCC
Confidence 1699999966 9888 5 34566666654 555555443321 1100 00 00 2231 1111
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcC
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRID 489 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~ 489 (588)
..+.+++......+++.+.++.+.+++++.+.|.++ + +++..... .....++.|.+.. .+
T Consensus 232 ----~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~-~~~~~~~~-~~~~~~~~~~~~~-----~~ 291 (373)
T 3frk_A 232 ----DELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNP---------N-VIIPVEAD-YAKHVWYTFVIRS-----EK 291 (373)
T ss_dssp ----CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCT---------T-EECCCCCT-TEECCCSSEEEEE-----SS
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---------c-eEeccCCC-CCceeeEEEEEEe-----CC
Confidence 233455555544567889999999999999998874 4 55533211 1223334455443 24
Q ss_pred HHHHHHHHHhCCcEecccc----ccCcccccc-----hHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 490 PALVQKLADRHNISLSCGF----LQNIFFSGE-----YEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 490 ~~~v~~~l~~~gI~v~~G~----~c~~~~~~~-----~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
.+.+.+.|.++||.++.+. +|.+.+... .. .....+.. ..||+|++.++|.|||+++++
T Consensus 292 ~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----------~~lrl~~~~~~t~~di~~~~~ 359 (373)
T 3frk_A 292 RDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNF-PIAEKIAN-----------EILSIPIWYGMKNEEIEYVID 359 (373)
T ss_dssp HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSS-HHHHHHHH-----------HEEEECCCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCC-HHHHHHHh-----------CEEEccCCCCCCHHHHHHHHH
Confidence 7788888988999999664 343322110 00 00111111 289999999999999999999
Q ss_pred HHHHhhhh
Q 037063 561 FVSRFLDA 568 (588)
Q Consensus 561 ~l~~~l~~ 568 (588)
.|+++.++
T Consensus 360 ~l~~~~~~ 367 (373)
T 3frk_A 360 KINAWKLE 367 (373)
T ss_dssp HHHTCC--
T ss_pred HHHHHhhh
Confidence 99987654
No 68
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.93 E-value=2.1e-24 Score=228.11 Aligned_cols=298 Identities=13% Similarity=0.111 Sum_probs=205.6
Q ss_pred HHHHHHHHHh----CCCCCCce-EEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 183 KIRKRIMDFM----NISEDDYT-LVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~e~~-vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++|+.+++++ |.+.+... |++|+|+|+|+.+++.++ +++||+|+ ....|++ . ...++..|++++.++.
T Consensus 67 ~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~~~~~~-~----~~~~~~~g~~~~~v~~ 140 (389)
T 1gd9_A 67 ELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAF-LKDGEEVLIPTPAFVS-Y----APAVILAGGKPVEVPT 140 (389)
T ss_dssp HHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTT-CCTTCEEEEEESCCTT-H----HHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchh-H----HHHHHHCCCEEEEecc
Confidence 5666666665 85433345 999999999999999998 88999966 4555654 2 2345667999999998
Q ss_pred cCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCCC-C---C
Q 037063 257 AWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGSK-D---M 327 (588)
Q Consensus 257 ~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~~-d---~ 327 (588)
+.. ++.+|+++|+++++ +++++|++++++|+||..+| +++| ++|+++|+++|+|+++.... + .
T Consensus 141 ~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~ 212 (389)
T 1gd9_A 141 YEEDEFRLNVDELKKYVT--------DKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARH 212 (389)
T ss_dssp CGGGTTCCCHHHHHHHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCC
T ss_pred CCccCCCCCHHHHHHhcC--------cCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCC
Confidence 732 35689999999987 57899999999999999997 6667 89999999999999976531 1 0
Q ss_pred CC-CCCC-CCCCcEEEeccCccCCCCCCc--eEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCC
Q 037063 328 DT-LGLS-LFKPDFLICSFYKIFGENPSG--FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP 403 (588)
Q Consensus 328 ~~-l~l~-~~~~D~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G 403 (588)
.+ ..+. ..+.|+++.|+||.+| +.| +|++++++++++.+.....+. .+
T Consensus 213 ~~~~~~~~~~~~~i~~~s~sK~~~--~~G~r~G~~~~~~~~~~~l~~~~~~~--------------------------~~ 264 (389)
T 1gd9_A 213 YSIASLDGMFERTITVNGFSKTFA--MTGWRLGFVAAPSWIIERMVKFQMYN--------------------------AT 264 (389)
T ss_dssp CCGGGSTTCGGGEEEEEESTTTTT--CGGGCCEEEECCHHHHHHHHHHHTTT--------------------------TC
T ss_pred CCHhhccCCCCCEEEEecChhhcC--CcccceEEEEECHHHHHHHHHHHhhh--------------------------cc
Confidence 01 1121 1347899999999998 446 799999988777665322110 01
Q ss_pred CCCccchhhHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeec
Q 037063 404 ESSISGVSSKLVECKGLDHADA-LGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFD 482 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL~~l~~-~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~ 482 (588)
+.+.... +++..+|+.... ..++++.++.+.+++++.+.|.++ +++++.+ ..+.++.+.+..
T Consensus 265 ~~~~~~~---~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~----~~~~~~~~~~~~ 327 (389)
T 1gd9_A 265 CPVTFIQ---YAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM----------GLPTVKP----KGAFYIFPRIRD 327 (389)
T ss_dssp SCCHHHH---HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------TCCCCCC----CBTTEECCBCGG
T ss_pred CCCHHHH---HHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc----------CCeecCC----CeeeEEEEeccC
Confidence 1221111 334455554322 136778888999999999999884 2333333 123334445542
Q ss_pred CCCCCcCHHHHHHHHH-hCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHH
Q 037063 483 WNGTRIDPALVQKLAD-RHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAF 561 (588)
Q Consensus 483 ~~g~~i~~~~v~~~l~-~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~ 561 (588)
. | .+...+.+.|. ++||.++.|..|.. .+.++||+|++. +.+|++++++.
T Consensus 328 ~-~--~~~~~~~~~l~~~~gi~v~~g~~~~~------------------------~~~~~iRi~~~~--~~~~i~~~l~~ 378 (389)
T 1gd9_A 328 T-G--LTSKKFSELMLKEARVAVVPGSAFGK------------------------AGEGYVRISYAT--AYEKLEEAMDR 378 (389)
T ss_dssp G-T--CCHHHHHHHHHHHTCEECEEGGGGCG------------------------GGTTBEEEECCS--CHHHHHHHHHH
T ss_pred C-C--CCHHHHHHHHHHhCCEEEeCchhhCC------------------------CCCCeEEEEecC--CHHHHHHHHHH
Confidence 1 1 35666666664 89999998865521 112289999885 89999999999
Q ss_pred HHHhhhh
Q 037063 562 VSRFLDA 568 (588)
Q Consensus 562 l~~~l~~ 568 (588)
|.+++++
T Consensus 379 l~~~~~~ 385 (389)
T 1gd9_A 379 MERVLKE 385 (389)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988764
No 69
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.93 E-value=1.3e-24 Score=227.56 Aligned_cols=284 Identities=12% Similarity=0.094 Sum_probs=202.3
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
.++|+.|++++|+++++ |+||+|+|+|+.+++.++ +++||+|++. ..|++ . ...++..|++++.++.+ ++
T Consensus 68 ~~lr~~la~~~g~~~~~--i~~t~g~~~al~~~~~~l-~~~gd~Vl~~~p~~~~-~----~~~~~~~g~~~~~v~~~-~~ 138 (360)
T 3hdo_A 68 QKLREVAGELYGFDPSW--IIMANGSDEVLNNLIRAF-AAEGEEIGYVHPSYSY-Y----GTLAEVQGARVRTFGLT-GD 138 (360)
T ss_dssp HHHHHHHHHHHTCCGGG--EEEESSHHHHHHHHHHHH-CCTTCEEEEESSSCTH-H----HHHHHHHTCEEEEECBC-TT
T ss_pred HHHHHHHHHHhCcCcce--EEEcCCHHHHHHHHHHHH-hCCCCEEEEcCCChHH-H----HHHHHHCCCEEEEeeCC-CC
Confidence 58999999999987665 999999999999999999 8999997654 44443 2 34556779999999987 44
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCC-CCCCCc
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGL-SLFKPD 338 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l-~~~~~D 338 (588)
+.+ +++++. .+++++++++++|+||.++|+++| ++|+++|+++|+|+++..-..-..+.+ .....+
T Consensus 139 ~~~--~~l~~~----------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 206 (360)
T 3hdo_A 139 FRI--AGFPER----------YEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENV 206 (360)
T ss_dssp SSB--TTCCSS----------BCSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSE
T ss_pred CCH--HHHHhh----------cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCE
Confidence 444 333211 235699999999999999999999 999999999999999763100011111 123356
Q ss_pred EEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHH
Q 037063 339 FLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECK 418 (588)
Q Consensus 339 ~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~ 418 (588)
+++.|++|.+|.+..++|++++++++++.+...... .+.+.... +++..
T Consensus 207 i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~---~a~~~ 255 (360)
T 3hdo_A 207 VVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIRDH----------------------------YNLDRLAQ---AACVA 255 (360)
T ss_dssp EEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHSCS----------------------------CCSCHHHH---HHHHH
T ss_pred EEEecchHhhcCCccceeeEeeCHHHHHHHHHhCCC----------------------------CCCCHHHH---HHHHH
Confidence 889999999884345689999988777655432211 01222221 34445
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHH
Q 037063 419 GLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLAD 498 (588)
Q Consensus 419 aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~ 498 (588)
+|+... .++++.++.+++++++.+.|.++ +++++. ..+.++.+.+.+ .+...+.+.|.
T Consensus 256 ~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~----------~~~~~~-----~~~~~~~~~~~~-----~~~~~l~~~l~ 313 (360)
T 3hdo_A 256 ALRDQA--YLSECCRRIRETREWFTTELRSI----------GYDVIP-----SQGNYLFATPPD-----RDGKRVYDGLY 313 (360)
T ss_dssp HHHCHH--HHHHHHHHHHHHHHHHHHHHHHT----------TCEECC-----CSSSEEEEECTT-----CCHHHHHHHHH
T ss_pred HhcCHH--HHHHHHHHHHHHHHHHHHHHHHC----------CCEEcC-----CCccEEEEECCC-----CCHHHHHHHHH
Confidence 555422 25788889999999999999884 345543 346677776654 45788888888
Q ss_pred hCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 499 RHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 499 ~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
++||.++.|... .+.++||+|++ +.+|+++++++|+++.+.
T Consensus 314 ~~gi~v~~~~~~--------------------------~~~~~iRis~~---~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 314 ARKVLVRHFSDP--------------------------LLAHGMRISIG---TREEMEQTLAALKEIGEG 354 (360)
T ss_dssp HTTEECBCCCST--------------------------TTTTSEEEECC---CHHHHHHHHHHHHHHHC-
T ss_pred HCCEEEEECCCC--------------------------CCCCEEEEEcC---CHHHHHHHHHHHHHHhcc
Confidence 999999875320 11238999987 899999999999987654
No 70
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.93 E-value=2.1e-24 Score=227.98 Aligned_cols=300 Identities=13% Similarity=0.112 Sum_probs=203.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++.+.+.+.+.+.+|++.+...|++|+|+|+|+.+++.++ +++||+|++ ...|++ . ...++..|++++.++.
T Consensus 70 ~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~~~~~~-~----~~~~~~~g~~~~~v~~ 143 (388)
T 1j32_A 70 PRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAM-IEPGDEVIIPAPFWVS-Y----PEMVKLAEGTPVILPT 143 (388)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEESSCCTH-H----HHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCCChh-H----HHHHHHcCCEEEEecC
Confidence 34445555555555575433345999999999999999999 899999664 455553 2 2345678999999998
Q ss_pred cCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCCC------
Q 037063 257 AWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGSK------ 325 (588)
Q Consensus 257 ~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~~------ 325 (588)
+.. ++.+|+++|+++++ +++++|++++++|+||.++| +++| ++|+++|+++|+|+++....
T Consensus 144 ~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 215 (388)
T 1j32_A 144 TVETQFKVSPEQIRQAIT--------PKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQH 215 (388)
T ss_dssp CGGGTTCCCHHHHHHHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC
T ss_pred CcccCCCCCHHHHHHhcC--------cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCC
Confidence 632 45689999999997 67999999999999999988 6667 88999999999999965421
Q ss_pred -CCCCCCCCCCCCcEEEeccCccCCCCCCc--eEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccC
Q 037063 326 -DMDTLGLSLFKPDFLICSFYKIFGENPSG--FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKF 402 (588)
Q Consensus 326 -d~~~l~l~~~~~D~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~ 402 (588)
.+..++.+....|+++.|+||++| +.| +|++++++++++.+.....++ ..
T Consensus 216 ~~~~~~~~~~~~~~~~~~s~sK~~~--~~G~r~G~~~~~~~~~~~l~~~~~~~-------------------------~~ 268 (388)
T 1j32_A 216 LSIGAASPEAYERSVVCSGFAKTYA--MTGWRVGFLAGPVPLVKAATKIQGHS-------------------------TS 268 (388)
T ss_dssp CCGGGSCHHHHHTEEEEEESTTTTT--CTTTCCEEEECCHHHHHHHHHHHHTT-------------------------TC
T ss_pred CCHHHccccccCCEEEEeechhccC--CcccceEEEEeCHHHHHHHHHHHhhc-------------------------cc
Confidence 011111001347899999999998 446 999999988776654322110 01
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE-EEee
Q 037063 403 PESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA-FNVF 481 (588)
Q Consensus 403 GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~-f~~~ 481 (588)
+++.+.. .++..+|+...+ .++++.++.+.+++++.+.|.++ ++++++.| .++++. +.+.
T Consensus 269 ~~~~~~~----~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~-----~~~~~~~~~~~ 329 (388)
T 1j32_A 269 NVCTFAQ----YGAIAAYENSQD-CVQEMLAAFAERRRYMLDALNAM---------PGLECPKP-----DGAFYMFPSIA 329 (388)
T ss_dssp SCCHHHH----HHHHHHHHSCSH-HHHHHHHHHHHHHHHHHHHHHTC---------TTCBCCCC-----CBTTEECCBCG
T ss_pred CCCHHHH----HHHHHHHhCCcH-HHHHHHHHHHHHHHHHHHHHhhC---------CCCcccCC-----CeeEEEEEecC
Confidence 1111111 222234432111 25778888899999999999874 45555543 233332 3333
Q ss_pred cCCCCCcCHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 482 DWNGTRIDPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 482 ~~~g~~i~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
.. | .+...+.+.| +++||.++.|..|. ..++||+|++ ++.||++++++
T Consensus 330 ~~-~--~~~~~~~~~l~~~~gi~v~~g~~~~--------------------------~~~~iRis~~--~~~~~i~~~~~ 378 (388)
T 1j32_A 330 KT-G--RSSLDFCSELLDQHQVATVPGAAFG--------------------------ADDCIRLSYA--TDLDTIKRGME 378 (388)
T ss_dssp GG-T--CCHHHHHHHHHHHHCEECEEGGGGT--------------------------CTTBEEEECC--SCHHHHHHHHH
T ss_pred CC-C--CCHHHHHHHHHHhCCEEEeChhhhC--------------------------CCCcEEEEec--CCHHHHHHHHH
Confidence 21 1 3466666555 45899999885441 0128999987 69999999999
Q ss_pred HHHHhhhh
Q 037063 561 FVSRFLDA 568 (588)
Q Consensus 561 ~l~~~l~~ 568 (588)
.|++++++
T Consensus 379 ~l~~~l~~ 386 (388)
T 1j32_A 379 RLEKFLHG 386 (388)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 71
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.93 E-value=5.9e-24 Score=224.19 Aligned_cols=335 Identities=10% Similarity=0.061 Sum_probs=230.6
Q ss_pred CCeeeecCCCCC----CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHH
Q 037063 110 NNYVCFDYIGHG----LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIR 185 (588)
Q Consensus 110 ~~~vyLD~a~~g----l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r 185 (588)
++..|+|.++.. ..++.+.+++.+.+.....+++ .+...+|. .....++|
T Consensus 37 ~g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~------------------------~~~~~~g~--~~~~~~l~ 90 (384)
T 1bs0_A 37 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSG------------------------GSGHVSGY--SVVHQALE 90 (384)
T ss_dssp TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCC------------------------SBTTTTCC--CHHHHHHH
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCC------------------------CcCcccCC--hHHHHHHH
Confidence 356789988844 3567788877655532111111 00111111 35678999
Q ss_pred HHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCH
Q 037063 186 KRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHS 265 (588)
Q Consensus 186 ~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~ 265 (588)
+.|++++|++ + .++++++|+|+.+++.++ .++||+|++...+|... ...++..|++++.+|. +|.
T Consensus 91 ~~la~~~g~~--~--~i~~~sGt~a~~~~~~~~-~~~gd~v~~~~~~~~~~----~~~~~~~g~~~~~~~~------~d~ 155 (384)
T 1bs0_A 91 EELAEWLGYS--R--ALLFISGFAANQAVIAAM-MAKEDRIAADRLSHASL----LEAASLSPSQLRRFAH------NDV 155 (384)
T ss_dssp HHHHHHHTCS--E--EEEESCHHHHHHHHHHHH-CCTTCEEEEETTCCHHH----HHHHHTSSSEEEEECT------TCH
T ss_pred HHHHHHhCCC--c--EEEeCCcHHHHHHHHHHh-CCCCcEEEEcccccHHH----HHHHHHcCCCEEEeCC------CCH
Confidence 9999999984 2 666666699999999998 88999977665555422 2345668999998874 478
Q ss_pred HHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC-C--C----CCCCCCCCCC
Q 037063 266 GKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK-D--M----DTLGLSLFKP 337 (588)
Q Consensus 266 e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~-d--~----~~l~l~~~~~ 337 (588)
++|+++|++ . .+++++|++++++|+||..+|+++| ++|+++|+++|+|+++..+. . . ..++ ..+
T Consensus 156 ~~l~~~l~~----~-~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~---~~~ 227 (384)
T 1bs0_A 156 THLARLLAS----P-CPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQK---VKP 227 (384)
T ss_dssp HHHHHHHHS----C-CSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTT---CCC
T ss_pred HHHHHHHHh----c-CCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcC---CCC
Confidence 999999972 1 1247999999999999999999999 99999999999999976542 1 0 1122 248
Q ss_pred cEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHH
Q 037063 338 DFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVEC 417 (588)
Q Consensus 338 D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~ 417 (588)
|+++.|+||++| |.| |++++++++++.+...... . . ..++.+.... +++.
T Consensus 228 di~~~s~sK~~~--~~G-G~~~~~~~~~~~l~~~~~~---~-------------------~--~~~~~~~~~~---~~~~ 277 (384)
T 1bs0_A 228 ELLVVTFGKGFG--VSG-AAVLCSSTVADYLLQFARH---L-------------------I--YSTSMPPAQA---QALR 277 (384)
T ss_dssp SEEEEESSSTTS--SCC-EEEEECHHHHHHHHHHCHH---H-------------------H--SSBCCCHHHH---HHHH
T ss_pred cEEEeeccchhh--ccC-cEEEeCHHHHHHHHHhchh---h-------------------h--cCCCCCHHHH---HHHH
Confidence 999999999999 677 9999998887665432100 0 0 0112233322 4555
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHH
Q 037063 418 KGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLA 497 (588)
Q Consensus 418 ~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l 497 (588)
++|+.+.+..++.+.++.+.+++++.+.|.++ +++++. ..++++.+.+.+. .+...+.+.|
T Consensus 278 ~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~-----~~~~~~~~~~~~~----~~~~~l~~~l 338 (384)
T 1bs0_A 278 ASLAVIRSDEGDARREKLAALITRFRAGVQDL----------PFTLAD-----SCSAIQPLIVGDN----SRALQLAEKL 338 (384)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS----------SCEECS-----CCSSBCCEEEESH----HHHHHHHHHH
T ss_pred HHHHHHhccccHHHHHHHHHHHHHHHHHHHhc----------CCcccC-----CCCCEEEEEeCCH----HHHHHHHHHH
Confidence 67777763124788899999999999999885 245542 2456666766521 3356677777
Q ss_pred HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 498 DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 498 ~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
.++||.++.|..... ..+...||+|++.+++.+|++++++.|+++
T Consensus 339 ~~~gi~v~~~~~~~~-----------------------~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 339 RQQGCWVTAIRPPTV-----------------------PAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp HHTTEECCEECTTSS-----------------------CTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred HHCCcEEEeecCCCC-----------------------CCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 778999988743210 012248999999999999999999998864
No 72
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.93 E-value=6.1e-24 Score=227.26 Aligned_cols=306 Identities=12% Similarity=0.083 Sum_probs=205.9
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+++|++||+++|++ + +++++|+++|+++++.++ +++||+|+ ...+|++ ....+...+++.|+++.+++.
T Consensus 81 ~p~~~~le~~lA~l~g~~--~--~i~~ssGt~Ai~~al~~l-~~~Gd~Vi~~~~~y~~-~~~~~~~~l~~~G~~v~~v~~ 154 (415)
T 2fq6_A 81 TLTHFSLQQAMCELEGGA--G--CVLFPCGAAAVANSILAF-IEQGDHVLMTNTAYEP-SQDFCSKILSKLGVTTSWFDP 154 (415)
T ss_dssp CHHHHHHHHHHHHHHTCS--E--EEEESSHHHHHHHHHHTT-CCTTCEEEEETTSCHH-HHHHHHHTGGGGTCEEEEECT
T ss_pred CchHHHHHHHHHHHhCCC--e--EEEeCCHHHHHHHHHHHH-hCCCCEEEEeCCCchH-HHHHHHHHHHHcCcEEEEECC
Confidence 466789999999999984 2 566688899999999998 89999965 5667765 333334456678999999976
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH--cCcEEEEeCCCcCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE--KGWHVLLDATALGSKDMDTLGLS 333 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~--~g~~vvvDaa~~~~~d~~~l~l~ 333 (588)
+ |+++|+++|+ ++|++|++++++|++|.+.|+++| ++|++ +|+++++|+++..+....+++
T Consensus 155 ~------d~~~le~ai~--------~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~~-- 218 (415)
T 2fq6_A 155 L------IGADIVKHLQ--------PNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALD-- 218 (415)
T ss_dssp T------CGGGGGGGCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGG--
T ss_pred C------CHHHHHHhhc--------cCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCccc--
Confidence 3 6788888887 689999999999999999999999 99999 999999999988663233332
Q ss_pred CCCCcEEEeccCccCCCCCCc---eEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC-CCccc
Q 037063 334 LFKPDFLICSFYKIFGENPSG---FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE-SSISG 409 (588)
Q Consensus 334 ~~~~D~vv~S~~K~~G~~P~G---~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT-~~~~~ 409 (588)
+++|+++.|+||++| |.| .|+++.++++++.+..... ..|+ .+...
T Consensus 219 -~g~Div~~S~sK~lg--~~g~~~~G~l~~~~~~~~~l~~~~~---------------------------~~G~~~~~~~ 268 (415)
T 2fq6_A 219 -FGIDVSIQAATKYLV--GHSDAMIGTAVCNARCWEQLRENAY---------------------------LMGQMVDADT 268 (415)
T ss_dssp -GTCSEEEEETTTTTT--CSSSCCCEEEEECTTTHHHHHHHHH---------------------------HTTCCCCHHH
T ss_pred -cCCeEEEEeCccccC--CCCCceEEEEEeCHHHHHHHHHHHH---------------------------hcCCCCCHHH
Confidence 348999999999998 545 6999998877665542210 0111 11110
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCC------------CCcccEE
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVM------------FDRGPSL 476 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~------------~~rg~iv 476 (588)
.+.+..+++.+ ....++....+..+.+.|.+. |.+ +++-|.-. ...++++
T Consensus 269 ---a~~~~~~l~~l-----~~r~~~~~~n~~~l~~~L~~~---------~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~ 331 (415)
T 2fq6_A 269 ---AYITSRGLRTL-----GVRLRQHHESSLKVAEWLAEH---------PQVARVNHPALPGSKGHEFWKRDFTGSSGLF 331 (415)
T ss_dssp ---HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHTC---------TTEEEEECTTSTTSTTHHHHHHHCSCCCSEE
T ss_pred ---HHHHHhhhhHH-----HHHHHHHHHHHHHHHHHHHcC---------CCeeEEECCCCCCCccHHHHHhhCCCCceEE
Confidence 01222344433 223334444555666666653 323 33333210 1257899
Q ss_pred EEEeecCCCCCcCHHHHHHHHHhC---CcEeccccccCcccc--cchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCCC
Q 037063 477 AFNVFDWNGTRIDPALVQKLADRH---NISLSCGFLQNIFFS--GEYEQERVRVLETRSGTNETRSGV--SVVTAALGCL 549 (588)
Q Consensus 477 ~f~~~~~~g~~i~~~~v~~~l~~~---gI~v~~G~~c~~~~~--~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~ 549 (588)
+|.+.+. ++.....++++.. +|.++.|..|+.... .. ....... ....|. +.||+|+|..
T Consensus 332 sf~l~g~----~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~------~~s~~~~---~~~~g~~~~~iRlS~G~e 398 (415)
T 2fq6_A 332 SFVLKKK----LNNEELANYLDNFSLFSMAYSWGGYESLILANQPE------HIAAIRP---QGEIDFSGTLIRLHIGLE 398 (415)
T ss_dssp EEEESSC----CCHHHHHHHHTTCSSCEECSCCCSSSCEEEEECHH------HHHTTCT---TCCCCCCSCEEEEECCSS
T ss_pred EEEECCC----CCHHHHHHHHHhCCcCeEeccCCCCceeEEecCCC------ccccccc---hhhcCCCCCEEEEEecCC
Confidence 9998751 1244556666654 477788988875431 10 0111000 001222 3999999999
Q ss_pred CCHHHHHHHHHHHHHh
Q 037063 550 TNFEDTYRLWAFVSRF 565 (588)
Q Consensus 550 ~t~eDv~~li~~l~~~ 565 (588)
+++++|+.+.++|++.
T Consensus 399 ~~~d~i~~l~~al~~~ 414 (415)
T 2fq6_A 399 DVDDLIADLDAGFARI 414 (415)
T ss_dssp CHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHhh
Confidence 9999999999998753
No 73
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.93 E-value=9.3e-24 Score=223.50 Aligned_cols=321 Identities=12% Similarity=-0.013 Sum_probs=216.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....++|+.++++++.+ .++||+|+|+|+.+++.++.+++||+|+ ....|++ . ...++..|++++.++++
T Consensus 56 ~~~~~l~~~la~~~~~~----~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~-~----~~~~~~~g~~~~~~~~~ 126 (391)
T 3dr4_A 56 RFIVEFEKAFADYCGVK----HAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIA-S----ANSVTYCGATPVLVDND 126 (391)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTH-H----HHHHHHTTCEEEEECBC
T ss_pred hHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHH-H----HHHHHHCCCEEEEEecC
Confidence 45679999999999985 3899999999999999998788999966 5566664 2 23446789999999998
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFK 336 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~ 336 (588)
..++.+|+++|+++++ +++++|+ ++|+||...|+++| ++|+++|+++|+|+++..+...........
T Consensus 127 ~~~~~~d~~~l~~~~~--------~~~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~- 194 (391)
T 3dr4_A 127 PRTFNLDAAKLEALIT--------PRTKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSL- 194 (391)
T ss_dssp TTTCSBCGGGSGGGCC--------TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSS-
T ss_pred ccccCcCHHHHHHhcC--------CCceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeeccc-
Confidence 5667899999998887 6788887 46799999999999 999999999999999877521111111111
Q ss_pred CcEEEec--cCccCCCCCCceEEEEEeCc-chhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhH
Q 037063 337 PDFLICS--FYKIFGENPSGFGCLFVKKS-SASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSK 413 (588)
Q Consensus 337 ~D~vv~S--~~K~~G~~P~G~G~L~v~~~-~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~ 413 (588)
.|++++| .||+++ +...|+++.+++ +.+.+.....++ ... . . .+ .+...|. ++..
T Consensus 195 ~di~~~S~s~~K~l~--~g~gg~~~~~~~~~~~~~~~~~~~g--~~~---~-~---~~------~~~~~g~-~~~~---- 252 (391)
T 3dr4_A 195 GDCATFSFFGNAIIT--TGEGGMITTNDDDLAAKMRLLRGQG--MDP---N-R---RY------WFPIVGF-NYRM---- 252 (391)
T ss_dssp SSEEEEECBTTSSSC--CBSCEEEEESCHHHHHHHHHHHBTT--CCT---T-S---TT------CCSSCCC-BCBC----
T ss_pred CCEEEEECCCCCcCC--cCCeEEEEECCHHHHHHHHHHHhcC--CCC---C-C---cc------ccccccc-ccCC----
Confidence 3677777 559887 434577777654 445554433221 100 0 0 00 0102221 1111
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCC--CCC-CCcccEEEEEeecCCCCCcCH
Q 037063 414 LVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGP--KVM-FDRGPSLAFNVFDWNGTRIDP 490 (588)
Q Consensus 414 ~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p--~~~-~~rg~iv~f~~~~~~g~~i~~ 490 (588)
..+.+++......+++++.++.+.+++++.+.|.++ +++++.+ ... .....++.+.+.+.. .++.
T Consensus 253 ~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~ 320 (391)
T 3dr4_A 253 TNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL----------GNRVTKPHVALTGRHVFWMYTVRLGEGL--STTR 320 (391)
T ss_dssp CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG----------TTSEECCCCCTTSCCCCSSEEEEECSSC--SSCH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----------CccccCcCCCCCCcceeEEEEEEECCcc--chhH
Confidence 234455555555568899999999999999999985 2334443 211 122235566665421 2567
Q ss_pred HHHHHHHHhCCcEecccc---ccCcccccc---hHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 491 ALVQKLADRHNISLSCGF---LQNIFFSGE---YEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 491 ~~v~~~l~~~gI~v~~G~---~c~~~~~~~---~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
..+.+.|.++||.++.|. +|.+.+... .. .....+.. ..||++++.++|.|||+++++.|++
T Consensus 321 ~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~-----------~~lrl~~~~~~t~edi~~~~~~l~~ 388 (391)
T 3dr4_A 321 DQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDL-KIAEACGV-----------DGLNLPTHAGLTEADIDRVIAALDQ 388 (391)
T ss_dssp HHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTC-HHHHHHHH-----------HEEEECCCTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCceeecCCccccChhhhhcCcCCC-hHHHHHHh-----------CeEEccCCCCCCHHHHHHHHHHHHH
Confidence 888888888999999886 565543220 00 00111112 2899999999999999999999988
Q ss_pred hh
Q 037063 565 FL 566 (588)
Q Consensus 565 ~l 566 (588)
++
T Consensus 389 ~l 390 (391)
T 3dr4_A 389 VL 390 (391)
T ss_dssp TC
T ss_pred Hh
Confidence 75
No 74
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.93 E-value=9.2e-24 Score=230.55 Aligned_cols=325 Identities=10% Similarity=0.027 Sum_probs=217.5
Q ss_pred hHHHHHHHHHHHHHhCCCCC-------CceEEEecCHHHHHHHHHHhCCCC--C------CC--------e--EE-EcCC
Q 037063 178 SELESKIRKRIMDFMNISED-------DYTLVFTANQSSAFKLLAESYPFY--S------NP--------R--LL-TVYD 231 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~-------e~~vvft~g~T~al~lv~~s~~~~--~------gd--------~--ll-~~~e 231 (588)
.++++++++++++++|++.+ ...++||+|+|+|+.+++.+..-. + || + |+ +...
T Consensus 112 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~ 191 (486)
T 1js3_A 112 TELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQA 191 (486)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTC
T ss_pred HHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCC
Confidence 67888999999999999742 135899999999988777654110 1 42 4 44 4455
Q ss_pred CchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH
Q 037063 232 HENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE 310 (588)
Q Consensus 232 ~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~ 310 (588)
|++ + .+.++..|++++.+|++ +++.+|+++|+++|++. .+....+.+|++++++|+||.+.|+++| ++|++
T Consensus 192 h~s--~---~~~~~~~G~~v~~v~~d-~~~~~d~~~L~~~i~~~--~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~ 263 (486)
T 1js3_A 192 HSS--V---ERAGLIGGVKLKAIPSD-GKFAMRASALQEALERD--KAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHE 263 (486)
T ss_dssp CHH--H---HHHHHHHTCEEEEECCC-TTSCCCHHHHHHHHHHH--HHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred cHH--H---HHHHHhCCCceEEeecC-CCCCCCHHHHHHHHHHH--HhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 653 2 34556779999999998 78899999999999821 0011123599999999999999999999 99999
Q ss_pred cCcEEEEeCCCcCCC----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcc--hhccc--CCC-CCCCceEee
Q 037063 311 KGWHVLLDATALGSK----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSS--ASVLS--GST-SSVSTIMGI 381 (588)
Q Consensus 311 ~g~~vvvDaa~~~~~----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~--~~~l~--~~~-~g~~g~v~~ 381 (588)
+|+++++|+++..+. +...+-.....+|++++++||+++. |.|+|+++++++. .+.+. +.+ .++ +....
T Consensus 264 ~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~-p~~~G~l~~~~~~~l~~~~~~~~~yl~~~-~~~~~ 341 (486)
T 1js3_A 264 EDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLV-NFDCSAMWVKRRTDLTGAFKLDPVYLKHS-HQGSG 341 (486)
T ss_dssp TTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSC-CSSCEEEEESCHHHHHGGGC-------------CC
T ss_pred cCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCC-CcceEEEEEeCHHHHHHHhcCCchhhCCC-ccccc
Confidence 999999999976541 1111100112489999999998886 8899999998763 34442 111 110 10000
Q ss_pred ecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE
Q 037063 382 EPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV 461 (588)
Q Consensus 382 ~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v 461 (588)
...+...+ .. +. +..+.. .++..+++.+...|++++.++...+++++.+.|.++ |++
T Consensus 342 --~~~~~~~~------~~-~~-~rr~~~----~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---------~~~ 398 (486)
T 1js3_A 342 --LITDYRHW------QL-PL-GRRFRS----LKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQD---------PRF 398 (486)
T ss_dssp --SCCCGGGS------SS-CS-CCCCTH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------TTE
T ss_pred --CCCCcccc------CC-CC-CCchhH----HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC---------CCe
Confidence 00000000 00 11 112211 355567776666678999999999999999999984 688
Q ss_pred EEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccE
Q 037063 462 RIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSV 541 (588)
Q Consensus 462 ~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~ 541 (588)
+++.+ ...++++|.+.+.+ .+ ...+.+.|.+.|+.+..+... .+..+
T Consensus 399 ~~~~~----~~~~~v~f~~~~~~--~~-~~~l~~~L~~~g~~~~~~~~~--------------------------~~~~~ 445 (486)
T 1js3_A 399 EVCAE----VTLGLVCFRLKGSD--GL-NEALLERINSARKIHLVPCRL--------------------------RGQFV 445 (486)
T ss_dssp EECSC----CCSSEEEEEESSCH--HH-HHHHHHHHHHHTSCBCEEEEE--------------------------TTEEE
T ss_pred EEeCC----CceeEEEEEecChH--HH-HHHHHHHHHhcCCEEEEEEEE--------------------------CCEEE
Confidence 98864 24789999876411 01 245556566667653322110 23348
Q ss_pred EEEec-CCCCCHHHHHHHHHHHHHhhhh
Q 037063 542 VTAAL-GCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 542 vRvSl-g~~~t~eDv~~li~~l~~~l~~ 568 (588)
+|+++ +.++|.+||+++++.|+++++.
T Consensus 446 lRi~~~~~~~t~~di~~~~~~l~~~~~~ 473 (486)
T 1js3_A 446 LRFAICSRKVESGHVRLAWEHIRGLAAE 473 (486)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99997 6789999999999999998765
No 75
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.93 E-value=5.8e-24 Score=231.55 Aligned_cols=321 Identities=14% Similarity=0.024 Sum_probs=216.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCC-------ceEEEecCHHHHHHHHHHhCCC------------------CCCCeEE-EcCC
Q 037063 178 SELESKIRKRIMDFMNISEDD-------YTLVFTANQSSAFKLLAESYPF------------------YSNPRLL-TVYD 231 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e-------~~vvft~g~T~al~lv~~s~~~------------------~~gd~ll-~~~e 231 (588)
.++++++.+++++++|.+.+. ...+||+|+|+|+.+++.+... .++++|+ +...
T Consensus 112 ~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~ 191 (475)
T 3k40_A 112 TELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQA 191 (475)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTS
T ss_pred HHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCc
Confidence 688889999999999996431 2599999999997665554310 1234555 4556
Q ss_pred CchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH
Q 037063 232 HENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE 310 (588)
Q Consensus 232 ~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~ 310 (588)
|++ . .+.++..|++++.+|++ +++ +|+++|+++|++. ......+.+|++++.+|.+|.+.|+++| ++|++
T Consensus 192 H~s-~----~~~~~~~g~~~~~v~~d-~~~-~d~~~L~~~i~~~--~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~ 262 (475)
T 3k40_A 192 HSS-V----ERAGLLGGVKLRSVQSE-NHR-MRGAALEKAIEQD--VAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNK 262 (475)
T ss_dssp CHH-H----HHHHHHHTCEEEEECCB-TTB-CCHHHHHHHHHHH--HHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred hHH-H----HHHHHHcCCceEEEECC-CCC-cCHHHHHHHHHHH--HHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHH
Confidence 654 2 34455679999999998 678 9999999999831 1112347889999999999999999999 99999
Q ss_pred cCcEEEEeCCCcCCC----CCCCC--CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcch--hccc--CCCCCCCceEe
Q 037063 311 KGWHVLLDATALGSK----DMDTL--GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSA--SVLS--GSTSSVSTIMG 380 (588)
Q Consensus 311 ~g~~vvvDaa~~~~~----d~~~l--~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~--~~l~--~~~~g~~g~v~ 380 (588)
+|++++||+++..+. ....+ ++ ..+|++++++||+++. |.|+|+++++++.. +.+. +.+... ....
T Consensus 263 ~~~~lhvD~A~~~~~~~~~~~~~~~~gi--~~~Ds~~~~~hK~l~~-p~g~g~l~~~~~~~l~~~~~~~~~yl~~-~~~~ 338 (475)
T 3k40_A 263 HNLWIHVDAAYAGSAFICPEYRHLMKGI--ESADSFNFNPHKWMLV-NFDCSAMWLKDPSWVVNAFNVDPLYLKH-DMQG 338 (475)
T ss_dssp TTCEEEEECTTGGGGGGSGGGGGGGTTG--GGCSEEEECHHHHSSC-CSSCEEEEESSGGGC------------------
T ss_pred hCCeEEEeHHhHHHHHhCHhhHHHhcCc--ccCCEEEECchhccCC-CCceEEEEEeCHHHHHHHhcCCccccCC-CcCC
Confidence 999999999976641 11111 21 2379999999997775 99999999998643 1121 111110 0000
Q ss_pred eecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCe
Q 037063 381 IEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPL 460 (588)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~ 460 (588)
... +..++ .+ +.|.+ +.. ..+..+++.+...|++++.++...+++++.+.|+++ ++
T Consensus 339 ~~~---~~~~~------~~-~~sr~-~~~----l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---------~g 394 (475)
T 3k40_A 339 SAP---DYRHW------QI-PLGRR-FRA----LKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVAD---------SR 394 (475)
T ss_dssp --------------------CCCGG-GTH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---------TT
T ss_pred CCC---Ccccc------cc-cCCCc-ccH----HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC---------CC
Confidence 000 00000 11 22222 222 456678888777789999999999999999999984 78
Q ss_pred EEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcE-eccccccCcccccchHHHHHHHHhhhcCCCCCcCCc
Q 037063 461 VRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNIS-LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGV 539 (588)
Q Consensus 461 v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~-v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~ 539 (588)
++++.+ ...++++|.+.+.+ .....+.+.|.+.|+. +..+. ..|.
T Consensus 395 ~~l~~~----~~~~iv~f~~~~~~---~~~~~l~~~L~~~g~~~~~~~~---------------------------~~g~ 440 (475)
T 3k40_A 395 FELAAE----INMGLVCFRLKGSN---ERNEALLKRINGRGHIHLVPAK---------------------------IKDV 440 (475)
T ss_dssp EEESSC----CBTTEEEEEESSCH---HHHHHHHHHHHHHTSCBCEEEE---------------------------ETTE
T ss_pred EEEecC----CceEEEEEEeCCch---HHHHHHHHHHHhCCcEEEEeeE---------------------------ECCE
Confidence 999876 35689999986421 1234455555555553 33221 1344
Q ss_pred cEEEEecC-CCCCHHHHHHHHHHHHHhhhhh
Q 037063 540 SVVTAALG-CLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 540 ~~vRvSlg-~~~t~eDv~~li~~l~~~l~~~ 569 (588)
..+|+++. +.+|.+||+++++.|++++++.
T Consensus 441 ~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~ 471 (475)
T 3k40_A 441 YFLRMAICSRFTQSEDMEYSWKEVSAAADEM 471 (475)
T ss_dssp EEEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 49999975 6679999999999999987653
No 76
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.93 E-value=1.5e-24 Score=230.33 Aligned_cols=305 Identities=13% Similarity=0.065 Sum_probs=212.1
Q ss_pred hHHHHHHHHHHHHHhCCCCCC-ceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 178 SELESKIRKRIMDFMNISEDD-YTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e-~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++.+++++.+++++|.+.+. ..|+||+|+|+|+.+++.++ +++||+|++. ..|++ . ...++..|++++.++
T Consensus 81 ~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~-~----~~~~~~~g~~~~~~~ 154 (407)
T 3nra_A 81 LGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAAT-VARGDKVAIVQPDYFA-N----RKLVEFFEGEMVPVQ 154 (407)
T ss_dssp HHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTT-CCTTCEEEEEESCCTH-H----HHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHh-CCCCCEEEEcCCcccc-h----HHHHHHcCCEEEEee
Confidence 578889999999999985322 35999999999999999999 8999997654 44443 2 345567899999999
Q ss_pred ccC-----CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCC--
Q 037063 256 FAW-----PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGS-- 324 (588)
Q Consensus 256 ~~~-----~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~-- 324 (588)
.+. .++.+|+++|++++. +++++|++++++|+||..+| +++| ++|+++|+++|+|+++...
T Consensus 155 ~~~~~~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~ 226 (407)
T 3nra_A 155 LDYVSADETRAGLDLTGLEEAFK--------AGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRY 226 (407)
T ss_dssp BCCCSSCCSSCCBCHHHHHHHHH--------TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBC
T ss_pred cccccccCcCCCcCHHHHHHHHh--------hCCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEcccccccc
Confidence 831 567799999999998 57899999999999999999 7778 8999999999999997652
Q ss_pred --CC---CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccccccc
Q 037063 325 --KD---MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQ 399 (588)
Q Consensus 325 --~d---~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f 399 (588)
.. +..++......++++.|++|.+|.++.++|+++.++++++.+...... +
T Consensus 227 ~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~------------------------~ 282 (407)
T 3nra_A 227 AGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEKLQAI------------------------V 282 (407)
T ss_dssp TTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHHHHHH------------------------H
T ss_pred CCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHHHHhh------------------------h
Confidence 11 111110123356999999999984334589999988877666432211 0
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEE
Q 037063 400 SKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFN 479 (588)
Q Consensus 400 ~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~ 479 (588)
..+++.+.. +++..+|+.... .+++..++.+.+++++.+.|.++ ++++++.+. .+.++.+.
T Consensus 283 -~~~~~~~~~----~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~~~----~~~~~~~~ 343 (407)
T 3nra_A 283 -SLRAAGYSQ----AVLRGWFDEAPG-WMEDRIARHQAIRDELLHVLRGC---------EGVFARTPQ----AGSYLFPR 343 (407)
T ss_dssp -TSSSCHHHH----GGGGGTTCCCTT-HHHHHHHHHHHHHHHHHHHHHTS---------TTCBCCCCS----BSSEECCB
T ss_pred -ccCCChHHH----HHHHHHHhccch-HHHHHHHHHHHHHHHHHHHHhcC---------CCceeccCC----eeEEEEEe
Confidence 001111111 111122221001 15677788888999999999874 455555442 23444444
Q ss_pred eecCCCCCcCHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHH
Q 037063 480 VFDWNGTRIDPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRL 558 (588)
Q Consensus 480 ~~~~~g~~i~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~l 558 (588)
+... .++...+.+.| +++||.+++|..|.+ .+..+||+|++. +.+||+++
T Consensus 344 ~~~~---~~~~~~~~~~l~~~~gi~v~~g~~~~~------------------------~~~~~iRis~~~--~~~~i~~~ 394 (407)
T 3nra_A 344 LPKL---AVAPAEFVKILRLQAGVVVTPGTEFSP------------------------HTADSVRLNFSQ--DHEAAVAA 394 (407)
T ss_dssp CCCB---SSCHHHHHHHHHHHHCEECEEGGGTCT------------------------TCTTBEEEECCS--CHHHHHHH
T ss_pred CCCC---CCCHHHHHHHHHHhCCEEEeCchhhCC------------------------CCCCEEEEEeCC--CHHHHHHH
Confidence 4321 14566666655 567999999876631 122389999984 99999999
Q ss_pred HHHHHHhhhh
Q 037063 559 WAFVSRFLDA 568 (588)
Q Consensus 559 i~~l~~~l~~ 568 (588)
++.|++++++
T Consensus 395 ~~~l~~~~~~ 404 (407)
T 3nra_A 395 ARRIVTLVER 404 (407)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 77
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.93 E-value=3.8e-24 Score=227.57 Aligned_cols=348 Identities=11% Similarity=0.018 Sum_probs=211.9
Q ss_pred CeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHH
Q 037063 111 NYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMD 190 (588)
Q Consensus 111 ~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~ 190 (588)
...-.||.+++...+.+.+.+. .++|+.+ ...|+.......+++++++++
T Consensus 27 ~~~~p~~~~~~~~~~~~~~~~~------~~~~~~~------------------------~~~~~r~~~~~~~~l~~~la~ 76 (398)
T 1gc0_A 27 ALVPPVYQTATFTFPTVEYGAA------CFAGEQA------------------------GHFYSRISNPTLNLLEARMAS 76 (398)
T ss_dssp BSSCCBCCCSCBCCC---------------------------------------------------CCHHHHHHHHHHHH
T ss_pred CcCCCccCCCccccCCHHHHHH------hhcCCcC------------------------CCcccCCCChHHHHHHHHHHH
Confidence 4556788888887766666542 1333311 001122225678899999999
Q ss_pred HhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHH
Q 037063 191 FMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLM 269 (588)
Q Consensus 191 ~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~ 269 (588)
++|++ ..++++++|+|+.+++.++ +++||+|+ ....|++ ....+..+++..|++++.++.+ |.++|+
T Consensus 77 ~~g~~----~~i~~~sG~~a~~~~l~~~-~~~gd~vl~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~------d~~~l~ 144 (398)
T 1gc0_A 77 LEGGE----AGLALASGMGAITSTLWTL-LRPGDEVLLGNTLYGC-TFAFLHHGIGEFGVKLRHVDMA------DLQALE 144 (398)
T ss_dssp HHTCS----EEEEESSHHHHHHHHHHHH-CCTTCEEEEESSCCSH-HHHHHHHTGGGGTCEEEEECTT------CHHHHH
T ss_pred HhCCC----cEEEECCHHHHHHHHHHHH-hcCCCEEEEeCCCchh-HHHHHHHHHHHcCCEEEEECCC------CHHHHH
Confidence 99985 2566666689999999998 88999966 4566665 3333344457789999998763 789999
Q ss_pred HHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCccC
Q 037063 270 KKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKIF 348 (588)
Q Consensus 270 ~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~~ 348 (588)
++|+ +++++|++++++|+||.+.|+++| ++|+++|+++|+|+++..+....++. +++|+++.|+||++
T Consensus 145 ~~i~--------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~---~~~d~~~~S~sK~~ 213 (398)
T 1gc0_A 145 AAMT--------PATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPLE---LGADLVVHSATKYL 213 (398)
T ss_dssp HHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGG---GTCSEEEEETTTTT
T ss_pred HhcC--------CCCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCchh---hCceEEEECCcccc
Confidence 9987 689999999999999999999999 99999999999999987652112221 34899999999988
Q ss_pred CCCCCc--eEEEEEeCcchh-cccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHH
Q 037063 349 GENPSG--FGCLFVKKSSAS-VLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADA 425 (588)
Q Consensus 349 G~~P~G--~G~L~v~~~~~~-~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~ 425 (588)
|. |.+ .|+++++++.+. .+.+...+ .+ .++.+.... +++..+++.+
T Consensus 214 ~~-~~~~~~G~l~~~~~~~~~~~~~~~~~-----------------------~~--~~~~~~~~~---~~~~~~l~~~-- 262 (398)
T 1gc0_A 214 SG-HGDITAGIVVGSQALVDRIRLQGLKD-----------------------MT--GAVLSPHDA---ALLMRGIKTL-- 262 (398)
T ss_dssp TC-SSSCCCEEEEECHHHHHHHHHTHHHH-----------------------HT--CCCCCHHHH---HHHHHHHTTH--
T ss_pred CC-CCCCeEEEEEEChHHHHHHHHHHhhc-----------------------cC--CCCCCHHHH---HHHHhccchH--
Confidence 84 544 599999887654 34332111 00 122222221 2333455433
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHccc------CCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHh
Q 037063 426 LGLILISNRARYLINWLANALMNLH------HPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADR 499 (588)
Q Consensus 426 ~G~~~i~~r~~~L~~~l~~~L~~L~------h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~ 499 (588)
....++....++.+.+.|.++. ++.-+ ..|+++++++.. ...+++++|.+.+ ..+.+.+++++
T Consensus 263 ---~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~-~~~~~~~~~~~~-~~~~~~~~~~l~~------~~~~~~~~l~~ 331 (398)
T 1gc0_A 263 ---NLRMDRHCANAQVLAEFLARQPQVELIHYPGLA-SFPQYTLARQQM-SQPGGMIAFELKG------GIGAGRRFMNA 331 (398)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHTCTTEEEEEEC------------------CCTTEEEEEETT------HHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCC-CCcCHHHHHhhC-CCCceEEEEEECC------CHHHHHHHHHh
Confidence 3333444444555555555421 11000 123455555422 1368999998864 14567888999
Q ss_pred CCcEecc---ccc------cCccc-ccchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 500 HNISLSC---GFL------QNIFF-SGEYEQERVRVLETRSGTNETRSGV--SVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 500 ~gI~v~~---G~~------c~~~~-~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
.+|.++. |.. |.... +... ...+.. .|. +.||+|+|..++.++|+.+.++|+++
T Consensus 332 ~~i~~~~~s~G~~~sl~~~~~~~~~~~~~----~~~~~~--------~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 332 LQLFSRAVSLGDAESLAQHPASMTHSSYT----PEERAH--------YGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp CSSSEECSCCSCSSCEEECGGGTTTSSSC----HHHHHH--------TTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CCCceeccCCCCcceeeecccccccccCC----HHHHHh--------cCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 9988765 422 32110 0000 011111 232 49999999999999999999998864
No 78
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.93 E-value=8.2e-25 Score=232.12 Aligned_cols=351 Identities=12% Similarity=0.031 Sum_probs=236.6
Q ss_pred eeeecCCCCCCCCHHHHHHhhhhcccC-cCCCCCCCCCCCCCCCCCcccccccccccccccccCCc-hhHHHHHHHHHHH
Q 037063 112 YVCFDYIGHGLFSYSQMHSCSSNVHSS-AASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSE-ESELESKIRKRIM 189 (588)
Q Consensus 112 ~vyLD~a~~gl~~~~~~~~~~~~~~~~-~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~-~~~~~~~~r~~ia 189 (588)
..++|+++.+++|+.+++++.+.+... ..++|. +....|.. ..++.+.+|++++
T Consensus 24 ~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~l~~~~r~~la 79 (405)
T 2vi8_A 24 AKIELIASENFVSRAVMEAQGSVLTNKYAEGYPG------------------------RRYYGGCEYVDIVEELARERAK 79 (405)
T ss_dssp HSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETT------------------------EESSSCCHHHHHHHHHHHHHHH
T ss_pred cceeeccCcccCCHHHHHHHHHHhhcccccCCCC------------------------ccccccchHHHHHHHHHHHHHH
Confidence 347888888999999999987665311 122221 11001111 2456667899999
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHH-HHHHhcCCEEEEEeccCCCCccCHHH
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMI-ESSKKRGARVSSAEFAWPNLRIHSGK 267 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~-~~a~~~G~~v~~v~~~~~~~~i~~e~ 267 (588)
+++|+++ ..++++++|+|+.+++.++ +++||+|++ ...|++....+.. .. ...+.+++.++++..++.+|+++
T Consensus 80 ~~~g~~~---~~i~~~sGt~a~~~a~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~d~~~ 154 (405)
T 2vi8_A 80 QLFGAEH---ANVQPHSGAQANMAVYFTV-LEHGDTVLGMNLSHGGHLTHGSPVNF-SGVQYNFVAYGVDPETHVIDYDD 154 (405)
T ss_dssp HHHTCSE---EECCCSSHHHHHHHHHHHH-CCTTCEEEEECGGGTCCTTTTCTTSH-HHHHSEEEEECBCTTTCSBCHHH
T ss_pred HHhCCCc---eEEEecCcHHHHHHHHHHh-cCCCCEEEEecccccchhcccchhhh-ccceeEEEecccccccCCcCHHH
Confidence 9999963 3555555599999999999 899999664 4444431111100 01 11234777777653467799999
Q ss_pred HHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC---CCCCCCCCCCCCCcEEEec
Q 037063 268 LMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS---KDMDTLGLSLFKPDFLICS 343 (588)
Q Consensus 268 l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~---~d~~~l~l~~~~~D~vv~S 343 (588)
|+++++. .++++|+++. + ..|...++++| ++|+++|+++|+|+++..+ .+.....+ ..+|++++|
T Consensus 155 l~~~i~~-------~~~~~v~~~~-~-~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~--~~~di~~~s 223 (405)
T 2vi8_A 155 VREKARL-------HRPKLIVAAA-A-AYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPV--PYAHFVTTT 223 (405)
T ss_dssp HHHHHHH-------HCCSEEEECC-S-SCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST--TTCSEEEEE
T ss_pred HHHHHHh-------cCCeEEEEeC-C-CCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCcc--ccCCEEEEe
Confidence 9999972 2678888732 2 35788899999 9999999999999998753 22222222 148999999
Q ss_pred cCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHH
Q 037063 344 FYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHA 423 (588)
Q Consensus 344 ~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l 423 (588)
+||++|. |.| |++++++++++.+.+.... + ..|+++..++ +++.++++.+
T Consensus 224 ~sK~~~g-~~g-G~~~~~~~~~~~l~~~~~~------------------------~-~~~~~~~~~~---aa~~~al~~~ 273 (405)
T 2vi8_A 224 THKTLRG-PRG-GMILCQEQFAKQIDKAIFP------------------------G-IQGGPLMHVI---AAKAVAFGEA 273 (405)
T ss_dssp SSSTTCC-CSC-EEEEECHHHHHHHHHHHTT------------------------T-TCSSCCHHHH---HHHHHHHHHH
T ss_pred ccccCCC-CCC-eEEEEcHHHHHHHHhhhcc------------------------c-ccCCCCHHHH---HHHHHHHHHH
Confidence 9998873 778 9999998777655432211 1 2344444443 5666788876
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcE
Q 037063 424 DALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNIS 503 (588)
Q Consensus 424 ~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~ 503 (588)
...+++.+.++.+.+++++.+.|.++ +++++.|. ..+.++.+.+.+. | ++...+.+.|.++||.
T Consensus 274 ~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~---~~~~~~~~~~~~~-~--~~~~~~~~~l~~~gi~ 337 (405)
T 2vi8_A 274 LQDDFKAYAKRVVDNAKRLASALQNE----------GFTLVSGG---TDNHLLLVDLRPQ-Q--LTGKTAEKVLDEVGIT 337 (405)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHHT----------TCEEGGGS---CSSSEEEEECGGG-T--CCHHHHHHHHHHHTEE
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhC----------CCeEecCC---CCceEEEEEccCC-C--CCHHHHHHHHHHcCce
Confidence 65567899999999999999999984 35666542 2467777777532 1 4577788888889999
Q ss_pred eccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCC----CCCHHHHHHHHHHHHHhhhh
Q 037063 504 LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGC----LTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 504 v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~----~~t~eDv~~li~~l~~~l~~ 568 (588)
++.|..+..... ..+.+.+|+|++. ..+.+|++++++.|+++++.
T Consensus 338 v~~g~~~~~~~~--------------------~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 386 (405)
T 2vi8_A 338 VNKNTIPYDPES--------------------PFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKN 386 (405)
T ss_dssp CEEECCTTCSSC--------------------TTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTC
T ss_pred eccCcCccccCC--------------------CCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhc
Confidence 998854310000 0112279999997 45799999999999998864
No 79
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.93 E-value=6.1e-24 Score=223.09 Aligned_cols=326 Identities=11% Similarity=0.088 Sum_probs=217.6
Q ss_pred CCeeeecCCCCCC-CCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGL-FSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRI 188 (588)
Q Consensus 110 ~~~vyLD~a~~gl-~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~i 188 (588)
++.++|+.+...+ .|+.+.+++.+.+...... |+. ..-..++|+.|
T Consensus 29 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~-------------------------------y~~--~~~~~~l~~~l 75 (370)
T 2z61_A 29 KKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTH-------------------------------YTD--SRGILELREKI 75 (370)
T ss_dssp CCCEECCCCSCSSCCCHHHHHHHHHHHHTTCCS-------------------------------CCC--TTCCHHHHHHH
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHHcCccC-------------------------------CCC--CCCCHHHHHHH
Confidence 4678888877654 4677788776554321100 000 00113566666
Q ss_pred HHHh----CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCcc
Q 037063 189 MDFM----NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRI 263 (588)
Q Consensus 189 a~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i 263 (588)
++++ |.+.+...|++|+|+|+|+.+++.++ +++||+|++ ...|++ . ...++..|++++.++ +
T Consensus 76 a~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~~~~-~----~~~~~~~g~~~~~v~-------~ 142 (370)
T 2z61_A 76 SELYKDKYKADIIPDNIIITGGSSLGLFFALSSI-IDDGDEVLIQNPCYPC-Y----KNFIRFLGAKPVFCD-------F 142 (370)
T ss_dssp HHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHH-CCTTCEEEEESSCCTH-H----HHHHHHTTCEEEEEC-------S
T ss_pred HHHHHHHhCCCCChhhEEECCChHHHHHHHHHHh-cCCCCEEEEeCCCchh-H----HHHHHHcCCEEEEeC-------C
Confidence 6665 43222335999999999999999999 899999664 455553 2 234567899998886 5
Q ss_pred CHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC-C---CCCCCC-CCCCC
Q 037063 264 HSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK-D---MDTLGL-SLFKP 337 (588)
Q Consensus 264 ~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~-d---~~~l~l-~~~~~ 337 (588)
|.++|+++++ +++++|++++++|+||..+|++ | ++|+++|+++|+|+++.... + ..-..+ ...+.
T Consensus 143 d~~~l~~~l~--------~~~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 213 (370)
T 2z61_A 143 TVESLEEALS--------DKTKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEK 213 (370)
T ss_dssp SHHHHHHHCC--------SSEEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSS
T ss_pred CHHHHHHhcc--------cCceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCc
Confidence 7899999887 5789999999999999999999 9 99999999999999976531 0 111122 12357
Q ss_pred cEEEeccCccCCCCCCc--eEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHH
Q 037063 338 DFLICSFYKIFGENPSG--FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLV 415 (588)
Q Consensus 338 D~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~a 415 (588)
|+++.|+||++| +.| +|++++++++++.+.....+ ..++.+.... ++
T Consensus 214 ~i~~~s~sK~~~--~~G~r~G~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~---~a 262 (370)
T 2z61_A 214 TILINGFSKLYA--MTGWRIGYVISNDEIIEAILKLQQN--------------------------LFISAPTISQ---YA 262 (370)
T ss_dssp EEEEEESTTTTT--CGGGCCEEEECCHHHHHHHHHHHHH--------------------------HTSSSCHHHH---HH
T ss_pred EEEEecChhccC--CccceEEEEEECHHHHHHHHHHHhh--------------------------cccCCCHHHH---HH
Confidence 999999999998 446 99999999877766432211 0112222221 33
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHH
Q 037063 416 ECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQK 495 (588)
Q Consensus 416 l~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~ 495 (588)
+..+|+.+....++++.++.+.+++++.+.|.++ +++++.+. .+.++.+.+.+ +...+.+
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~----~~~~~~~~~~~------~~~~~~~ 322 (370)
T 2z61_A 263 ALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF----------GWEVNNPI----GAYYVFPNIGE------DGREFAY 322 (370)
T ss_dssp HGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------TCBCCCCC----BTTEECCBCSS------CHHHHHH
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc----------CCeecCCC----cceEEEEecCC------CHHHHHH
Confidence 3445543112235778888889999999999874 23333331 22333334432 3556655
Q ss_pred HH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 496 LA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 496 ~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
.| +++||.++.|..|.. .+.+++|+|++ ++.||++++++.|+++++
T Consensus 323 ~l~~~~gi~v~~g~~f~~------------------------~~~~~~Ri~~~--~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 323 KLLKEKFVALTPGIGFGS------------------------KGKNYIRISYA--NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp HHHHHHCEECEEGGGGCG------------------------GGSSBEEEECC--SCHHHHHHHHHHHHHHHC
T ss_pred HHHHhCCEEEeCchhhCC------------------------CCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 55 478999998865521 01228999999 699999999999998775
No 80
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.93 E-value=3.5e-24 Score=225.02 Aligned_cols=296 Identities=9% Similarity=0.015 Sum_probs=203.3
Q ss_pred HHHHHHHHHhC------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 183 KIRKRIMDFMN------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 183 ~~r~~ia~~lg------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
++|+.++++++ ++++ .|+||+|+|+|+++++.++ .++||+|++ ...|++ . ...++..|++++.++
T Consensus 62 ~lr~~la~~~~~~~~~~~~~~--~i~~t~g~~~a~~~~~~~~-~~~gd~vl~~~~~~~~-~----~~~~~~~g~~~~~~~ 133 (377)
T 3fdb_A 62 LLSQATAEFYADRYGYQARPE--WIFPIPDVVRGLYIAIDHF-TPAQSKVIVPTPAYPP-F----FHLLSATQREGIFID 133 (377)
T ss_dssp CHHHHHHHHHHHHHCCCCCGG--GEEEESCHHHHHHHHHHHH-SCTTCCEEEEESCCTH-H----HHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCHH--HEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCcHh-H----HHHHHHcCCEEEEcc
Confidence 45566666655 5554 4999999999999999998 889999664 445553 2 344566799999999
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCcCCC-----C
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATALGSK-----D 326 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~~~~-----d 326 (588)
.+ ++ +|+++|+++++ ++++++++++++|+||..+|.+++ ++|+++|+++|+|+++.... .
T Consensus 134 ~~-~~--~d~~~l~~~l~--------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~ 202 (377)
T 3fdb_A 134 AT-GG--INLHDVEKGFQ--------AGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHT 202 (377)
T ss_dssp CT-TS--CCHHHHHHHHH--------TTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCC
T ss_pred CC-CC--CCHHHHHHHhc--------cCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCC
Confidence 97 33 99999999998 568999999999999999987664 56899999999999976521 0
Q ss_pred CCCC-CCCCCCCcEEEeccCccCCCCCCceEEEEE-eCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 327 MDTL-GLSLFKPDFLICSFYKIFGENPSGFGCLFV-KKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 327 ~~~l-~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v-~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
..++ .+.....++++.|++|.+|.+..++|++++ ++++++.+...... ..++
T Consensus 203 ~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~--------------------------~~~~ 256 (377)
T 3fdb_A 203 VAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPV--------------------------IKDG 256 (377)
T ss_dssp CGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHH--------------------------HHCC
T ss_pred cccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHHh--------------------------hcCC
Confidence 1111 111122458899999999843345898887 45665555432211 0112
Q ss_pred CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCC
Q 037063 405 SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWN 484 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~ 484 (588)
.+..+. +++..+|+...+ .++++.++.+.+++++.+.|+++ .|+++++.+. .+.++.+.+...
T Consensus 257 ~~~~~~---~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~--------~~~~~~~~~~----~~~~~~~~~~~~- 319 (377)
T 3fdb_A 257 ASTLGL---IAAEAAYRYGTD-FLNQEVAYLKNNHDFLLHEIPKR--------IPGAKITPMQ----ATYLMWIDFRDT- 319 (377)
T ss_dssp CCHHHH---HHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHH--------STTCEECCCS----BCSEEEEECTTS-
T ss_pred CCHHHH---HHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHHHhh--------CCCceEecCC----eeEEEEEECccc-
Confidence 222222 333455554222 25788889999999999999883 3567777542 233334555442
Q ss_pred CCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 485 GTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 485 g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
+ ++.+.+.++++++||.+++|..|.. .+.++||+|++ ++.|||+++++.|++
T Consensus 320 ~--~~~~~~~~l~~~~gi~v~~g~~~~~------------------------~~~~~~Ris~~--~~~e~i~~~l~~l~~ 371 (377)
T 3fdb_A 320 T--IEGSPSEFFIEKAKVAMNDGAWFGE------------------------DGTGFCRLNFA--TSREVLEEAIDRMAK 371 (377)
T ss_dssp C--CCSCHHHHHHHHHCEECEEGGGGCG------------------------GGTTEEEEECC--SCHHHHHHHHHHHHH
T ss_pred C--CCHHHHHHHHHhCCEEecCChhccC------------------------CCCCEEEEEeC--CCHHHHHHHHHHHHH
Confidence 1 2334556777778999999876631 11229999988 489999999999999
Q ss_pred hhhh
Q 037063 565 FLDA 568 (588)
Q Consensus 565 ~l~~ 568 (588)
++++
T Consensus 372 ~l~~ 375 (377)
T 3fdb_A 372 AVSH 375 (377)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 8764
No 81
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.93 E-value=7.1e-24 Score=223.90 Aligned_cols=300 Identities=11% Similarity=0.057 Sum_probs=204.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCc-eEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 179 ELESKIRKRIMDFMNISEDDY-TLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~-~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++.+.+.+.+.+.+|.+.+.. .|++|+|+|+|+.+++.++ +++||+|+ ....|++ . ...++..|++++.++.
T Consensus 71 ~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~~~~-~----~~~~~~~g~~~~~v~~ 144 (386)
T 1u08_A 71 ALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITAL-VRNGDEVICFDPSYDS-Y----APAIALSGGIVKRMAL 144 (386)
T ss_dssp HHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCTT-H----HHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHh-CCCCCEEEEeCCCchh-H----HHHHHHcCCEEEEeec
Confidence 344444444444457532223 4999999999999999998 88999966 4555654 2 2345678999999998
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCH---HHH-HHHHHcCcEEEEeCCCcCC----CCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSY---MWM-SVAAEKGWHVLLDATALGS----KDMD 328 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl---~~I-~~a~~~g~~vvvDaa~~~~----~d~~ 328 (588)
+.+++.+|.++|+++++ +++++|++++++|+||..+|. ++| ++|+++|+++|+|+++... ....
T Consensus 145 ~~~~~~~d~~~l~~~l~--------~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~ 216 (386)
T 1u08_A 145 QPPHFRVDWQEFAALLS--------ERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHA 216 (386)
T ss_dssp CTTTCCCCHHHHHHHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCC
T ss_pred CcccCcCCHHHHHHhhc--------ccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCc
Confidence 74456799999999987 679999999999999999985 556 8899999999999997652 1111
Q ss_pred CC-CCC-CCCCcEEEeccCccCCCCCCc--eEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 329 TL-GLS-LFKPDFLICSFYKIFGENPSG--FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 329 ~l-~l~-~~~~D~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
++ .+. ..+.|+++.|++|.+| +.| +|++++++++++.+...... ...+
T Consensus 217 ~~~~~~~~~~~~i~~~s~sK~~~--~~G~r~G~~~~~~~~~~~l~~~~~~--------------------------~~~~ 268 (386)
T 1u08_A 217 SVLAHPQLRERAVAVSSFGKTYH--MTGWKVGYCVAPAPISAEIRKVHQY--------------------------LTFS 268 (386)
T ss_dssp CGGGSHHHHTTEEEEEEHHHHTT--CGGGCCEEEECCHHHHHHHHHHHHH--------------------------HTSS
T ss_pred ChhcccCccCcEEEEecchhhcC--CcccceEEEEcCHHHHHHHHHHHHh--------------------------hccC
Confidence 11 111 2347999999999998 456 89999998877666432210 0011
Q ss_pred CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCC
Q 037063 405 SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWN 484 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~ 484 (588)
.+.... +++..+|+.... .++++.++.+++++++.+.|.++ +++++.+ ..+.++.+.+.+..
T Consensus 269 ~~~~~~---~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~----~~g~~~~~~~~~~~ 330 (386)
T 1u08_A 269 VNTPAQ---LALADMLRAEPE-HYLALPDFYRQKRDILVNALNES----------RLEILPC----EGTYFLLVDYSAVS 330 (386)
T ss_dssp CCHHHH---HHHHHHHHHCTH-HHHTHHHHHHHHHHHHHHHTTSS----------SCEECCC----CBSSEEEEECTTTC
T ss_pred CChHHH---HHHHHHHhCCcH-HHHHHHHHHHHHHHHHHHHHHHC----------CCeecCC----CceEEEEEecCCCC
Confidence 121111 344455554322 36778888899999999998874 3556544 23456767665420
Q ss_pred CCCcCHHHHHH-HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 485 GTRIDPALVQK-LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 485 g~~i~~~~v~~-~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
..+...+.+ +++++||.+++|..+... ..+...||+|++ ++.|||+++++.|+
T Consensus 331 --~~~~~~~~~~l~~~~gi~v~~g~~f~~~----------------------~~~~~~iRis~~--~~~~~i~~~~~~l~ 384 (386)
T 1u08_A 331 --TLDDVEFCQWLTQEHGVAAIPLSVFCAD----------------------PFPHKLIRLCFA--KKESTLLAAAERLR 384 (386)
T ss_dssp --CSCHHHHHHHHHHHSCEECEEGGGGCSS----------------------CCCSCEEEEECC--SCHHHHHHHHHHHT
T ss_pred --CCCHHHHHHHHHHhCCEEEeCchHhCCC----------------------CCCCCEEEEEEc--CCHHHHHHHHHHHh
Confidence 034556655 556899999987543110 012238999997 48999999999986
Q ss_pred H
Q 037063 564 R 564 (588)
Q Consensus 564 ~ 564 (588)
+
T Consensus 385 ~ 385 (386)
T 1u08_A 385 Q 385 (386)
T ss_dssp T
T ss_pred h
Confidence 5
No 82
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.93 E-value=2.3e-23 Score=217.44 Aligned_cols=285 Identities=13% Similarity=0.125 Sum_probs=207.1
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
.++|+.+++++++++++ |+||+|+|+|+.+++.++ |+|++ ...|++ . ...++..|++++.++.+ ++
T Consensus 64 ~~l~~~la~~~~~~~~~--i~~~~g~t~al~~~~~~~-----d~vi~~~~~~~~-~----~~~~~~~g~~~~~~~~~-~~ 130 (361)
T 3ftb_A 64 RRLNKSIENYLKLKDIG--IVLGNGASEIIELSISLF-----EKILIIVPSYAE-Y----EINAKKHGVSVVFSYLD-EN 130 (361)
T ss_dssp HHHHHHHHHHHTCCSCE--EEEESSHHHHHHHHHTTC-----SEEEEEESCCTH-H----HHHHHHTTCEEEEEECC-TT
T ss_pred HHHHHHHHHHhCCCcce--EEEcCCHHHHHHHHHHHc-----CcEEEecCChHH-H----HHHHHHcCCeEEEeecC-cc
Confidence 58999999999997764 999999999999999987 78654 445553 2 34556789999999998 55
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCcCC-CC--CCCCCC-
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATALGS-KD--MDTLGL- 332 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~~~-~d--~~~l~l- 332 (588)
+.+++++|+++++ + +++|++++++|+||..+|.+++ ++|+++|+++|+|+++... .+ ...+.+
T Consensus 131 ~~~~~~~l~~~l~--------~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 201 (361)
T 3ftb_A 131 MCIDYEDIISKID--------D-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEI 201 (361)
T ss_dssp SCCCHHHHHHHTT--------T-CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGT
T ss_pred cCCCHHHHHHhcc--------C-CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhc
Confidence 6788899999987 5 8999999999999999997764 6677999999999996532 10 111111
Q ss_pred CCCCCcEEEeccCccCCCCCCceEEEE-EeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchh
Q 037063 333 SLFKPDFLICSFYKIFGENPSGFGCLF-VKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVS 411 (588)
Q Consensus 333 ~~~~~D~vv~S~~K~~G~~P~G~G~L~-v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~ 411 (588)
.....++++.|++|.+|.++.++|+++ .++++++.+...... .+.+....
T Consensus 202 ~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~- 252 (361)
T 3ftb_A 202 KNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNP----------------------------WNINCFAE- 252 (361)
T ss_dssp TTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCT----------------------------TCSCHHHH-
T ss_pred ccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCC----------------------------CCCCHHHH-
Confidence 122345788899999884334579888 566666655433211 12222222
Q ss_pred hHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEE-EeCCCCCCCcccEEEEEeecCCCCCcCH
Q 037063 412 SKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVR-IYGPKVMFDRGPSLAFNVFDWNGTRIDP 490 (588)
Q Consensus 412 ~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~-i~~p~~~~~rg~iv~f~~~~~~g~~i~~ 490 (588)
+++..+|+.. ..++++.++.+.+++++.+.|.++ ++++ ++.+ .++++.+.+.+ .+.
T Consensus 253 --~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~---------~~~~~~~~~-----~~~~~~~~~~~-----~~~ 309 (361)
T 3ftb_A 253 --MAAINCLKDT--NYIEESLLWIKKERKRFIEELNKI---------GFIKRVFSP-----HANFVLCRLEN-----ISG 309 (361)
T ss_dssp --HHHHHTSSCH--HHHHHHHHHHHHHHHHHHHHHHHS---------SSEEEEECC-----SSSEEEEEESS-----SCH
T ss_pred --HHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhC---------CCCceecCC-----CCeEEEEEcCC-----CCH
Confidence 3444555532 236788889999999999999884 6777 6653 46777777765 457
Q ss_pred HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 491 ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 491 ~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
..+.+.|.++||.+++|..|.. .+.++||+|++ +.+|++++++.|+++++
T Consensus 310 ~~l~~~l~~~gi~v~~g~~~~~------------------------~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 310 EKLYDSLLKEDIVIRRCCNFIG------------------------LDDSFVRFAIK---DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp HHHHHHHHTTTEECEECTTSTT------------------------CCTTEEEEECC---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCeEEeeCccCCC------------------------CCCCEEEEEcC---CHHHHHHHHHHHHHHHh
Confidence 7788878778999999876621 22239999987 88999999999998764
No 83
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.93 E-value=4.6e-23 Score=226.48 Aligned_cols=331 Identities=12% Similarity=0.026 Sum_probs=222.2
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCC-------------CCCCeEEE-cCCCchhHHHHHHHH
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPF-------------YSNPRLLT-VYDHENEAAALMIES 243 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~-------------~~gd~ll~-~~e~~s~~~~~~~~~ 243 (588)
.++++++++++++++|.+.+...++||+|+|+|+..++.+..- .+++.|++ ...|++ . .+.
T Consensus 134 ~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s-~----~~~ 208 (511)
T 3vp6_A 134 VLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS-I----KKA 208 (511)
T ss_dssp HHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTH-H----HHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHH-H----HHH
Confidence 6788899999999999975445699999999998877655421 13456654 455554 2 345
Q ss_pred HHhcCC---EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeC
Q 037063 244 SKKRGA---RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDA 319 (588)
Q Consensus 244 a~~~G~---~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDa 319 (588)
++..|+ +++.++.+ +++.+|+++|+++|.+. +.....+++|++++++|++|.+.|+++| ++|+++|++++||+
T Consensus 209 ~~~~g~g~~~~~~v~~d-~~~~~d~~~Le~~i~~~--~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~ 285 (511)
T 3vp6_A 209 GAALGFGTDNVILIKCN-ERGKIIPADFEAKILEA--KQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDA 285 (511)
T ss_dssp HHHTTSCGGGEEEECBC-TTSCBCHHHHHHHHHHH--HHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEE
T ss_pred HHHcCCCCCcEEEeecC-CCCccCHHHHHHHHHHH--HhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEc
Confidence 566677 99999998 67899999999999731 1122348999999999999999999999 99999999999999
Q ss_pred CCcCCCC-CCCC--CCC-CCCCcEEEeccCccCCCCCCceEEEEEeCcc-hhcc---cCCCCCCCceEeeecCCCccccc
Q 037063 320 TALGSKD-MDTL--GLS-LFKPDFLICSFYKIFGENPSGFGCLFVKKSS-ASVL---SGSTSSVSTIMGIEPSFSEIIEL 391 (588)
Q Consensus 320 a~~~~~d-~~~l--~l~-~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~-~~~l---~~~~~g~~g~v~~~~~~~~~~~~ 391 (588)
++.++.- .... .+. ..++|++++++||+++. |.|+|+++++++. +..+ .+.+....+... ...+
T Consensus 286 a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~-p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~-------~~~~ 357 (511)
T 3vp6_A 286 AWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGV-LLQCSAILVKEKGILQGCNQMHASYLFQQDKHY-------DVSY 357 (511)
T ss_dssp TTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCC-CSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSS-------CGGG
T ss_pred cchhhHhhChhhhhhccCCccCCEEEECcccccCC-CcCeEEEEEeCHHHHHHHhccCCccccCccccc-------cccc
Confidence 9776521 1111 111 23489999999998875 8999999998864 3332 122211000000 0000
Q ss_pred ccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCC
Q 037063 392 ETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFD 471 (588)
Q Consensus 392 ~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~ 471 (588)
+.... .. +.|. .+.. .++..+++.+...|++++.+|...+++++.+.|+++ |+++++.+.. .
T Consensus 358 ~~~~~-~~-~~~r-~~~a----l~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~---------pg~~l~~~~~--p 419 (511)
T 3vp6_A 358 DTGDK-AI-QCGR-HVDI----FKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNR---------EEFEMVFNGE--P 419 (511)
T ss_dssp CCGGG-SS-CSSC-CCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---------TTEEESSSSC--C
T ss_pred CccCC-CC-CCCC-chHH----HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC---------CCEEEEecCC--C
Confidence 00000 11 1222 2222 456677887777789999999999999999999984 7899987421 3
Q ss_pred cccEEEEEeecCC--CCCcC----------HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCc
Q 037063 472 RGPSLAFNVFDWN--GTRID----------PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGV 539 (588)
Q Consensus 472 rg~iv~f~~~~~~--g~~i~----------~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~ 539 (588)
..++++|.+.... +..-+ ...+.+.|.+.|+.+...... ..+.
T Consensus 420 ~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~-------------------------~~~~ 474 (511)
T 3vp6_A 420 EHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQ-------------------------GDKA 474 (511)
T ss_dssp SSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEE-------------------------TTEE
T ss_pred CeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEe-------------------------CCce
Confidence 5678899864321 00000 124556666667643221000 0122
Q ss_pred cEEEEec-CCCCCHHHHHHHHHHHHHhhh
Q 037063 540 SVVTAAL-GCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 540 ~~vRvSl-g~~~t~eDv~~li~~l~~~l~ 567 (588)
..+|+++ +..++.+||+++++.|+++-+
T Consensus 475 ~~lRi~~~~~~~t~~di~~ll~~i~~~~~ 503 (511)
T 3vp6_A 475 NFFRMVISNPAATQSDIDFLIEEIERLGQ 503 (511)
T ss_dssp EEEEECCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 3799999 799999999999999998644
No 84
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.93 E-value=5.3e-24 Score=228.57 Aligned_cols=298 Identities=12% Similarity=0.019 Sum_probs=206.8
Q ss_pred HHHHHHHHHHhC-----CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 182 SKIRKRIMDFMN-----ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 182 ~~~r~~ia~~lg-----a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++|+.++++++ +++++ |++|+|+|+|+.+++.++ .++||+|++. ..|+. . ...++..|++++.++
T Consensus 99 ~~lr~~la~~~~~~~~~~~~~~--v~~t~g~t~al~~~~~~l-~~~gd~vl~~~p~~~~-~----~~~~~~~g~~~~~~~ 170 (427)
T 3dyd_A 99 LSSREEIASYYHCPEAPLEAKD--VILTSGCSQAIDLCLAVL-ANPGQNILVPRPGFSL-Y----KTLAESMGIEVKLYN 170 (427)
T ss_dssp HHHHHHHHHHHCBTTBCCCGGG--EEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCTH-H----HHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHhhcCCCCChHH--EEEecCcHHHHHHHHHHh-cCCCCEEEEcCCCchh-H----HHHHHHcCCEEEEEe
Confidence 589999999998 65554 999999999999999999 7899997654 34432 2 345677899999999
Q ss_pred ccC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcC----CC-
Q 037063 256 FAW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALG----SK- 325 (588)
Q Consensus 256 ~~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~----~~- 325 (588)
.+. .++.+|.++|++.++ +++++|++++++|+||..+| +++| ++|+++|+++|+|+++.. +.
T Consensus 171 ~~~~~~~~~d~~~l~~~l~--------~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~ 242 (427)
T 3dyd_A 171 LLPEKSWEIDLKQLEYLID--------EKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCK 242 (427)
T ss_dssp EEGGGTTEECHHHHHSSCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCC
T ss_pred cccccCCCCCHHHHHHHhc--------cCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCc
Confidence 863 345689999998887 67999999999999999999 8888 999999999999999654 21
Q ss_pred --CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCc-------chhcccCCCCCCCceEeeecCCCcccccccccc
Q 037063 326 --DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKS-------SASVLSGSTSSVSTIMGIEPSFSEIIELETLDE 396 (588)
Q Consensus 326 --d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~-------~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~ 396 (588)
.+..++ .....+++.|++|.||.+..++|+++++++ +++.+.....
T Consensus 243 ~~~~~~~~--~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~----------------------- 297 (427)
T 3dyd_A 243 YEPLATLS--TDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQ----------------------- 297 (427)
T ss_dssp CCCGGGGC--SSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHH-----------------------
T ss_pred CccHHHhC--CCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHh-----------------------
Confidence 111222 111236778999988743334899999863 2222211100
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE
Q 037063 397 SSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL 476 (588)
Q Consensus 397 ~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv 476 (588)
...+++..+. +++..+|+......++.+.++++.+++++.+.|+++ |+++++.|. .+.++
T Consensus 298 ----~~~~~~~~~~---~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~p~----~g~~~ 357 (427)
T 3dyd_A 298 ----RILGPCTIVQ---GALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAI---------PGLRPVRPS----GAMYL 357 (427)
T ss_dssp ----HHCCSCHHHH---HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHS---------TTEEEECCS----BTTEE
T ss_pred ----ccCCCCHHHH---HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcC---------CCceecCCC----eeEEE
Confidence 0112222222 344455553222236778888899999999999884 678877652 34455
Q ss_pred EEEeecC-CCCCcCHHH-HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHH
Q 037063 477 AFNVFDW-NGTRIDPAL-VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFED 554 (588)
Q Consensus 477 ~f~~~~~-~g~~i~~~~-v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eD 554 (588)
.+.+... -....+... +.++++++||.+++|..|. ..+++|+|++ ++.++
T Consensus 358 ~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~--------------------------~~~~iRis~~--~~~e~ 409 (427)
T 3dyd_A 358 MVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFE--------------------------YPNFIRVVIT--VPEVM 409 (427)
T ss_dssp EEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGT--------------------------CTTEEEEESC--SCHHH
T ss_pred EEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccC--------------------------CCCeEEEEEC--CCHHH
Confidence 5555421 001123444 4556678999999886552 1129999987 68999
Q ss_pred HHHHHHHHHHhhhh
Q 037063 555 TYRLWAFVSRFLDA 568 (588)
Q Consensus 555 v~~li~~l~~~l~~ 568 (588)
|+++++.|.+++++
T Consensus 410 i~~~l~~l~~~l~~ 423 (427)
T 3dyd_A 410 MLEACSRIQEFCEQ 423 (427)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998765
No 85
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.92 E-value=1.6e-23 Score=223.25 Aligned_cols=321 Identities=12% Similarity=0.012 Sum_probs=208.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCc-eEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 179 ELESKIRKRIMDFMNISEDDY-TLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~-~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++.+.+.+.+.+.+|++.+.. .|++|+|+|+|+.+++.++ +++||+|+ ....|++ . ...++..|++++.++.
T Consensus 66 ~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~-~~~gd~Vl~~~~~y~~-~----~~~~~~~g~~~~~v~~ 139 (411)
T 2o0r_A 66 PLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGL-VEPGSEVLLIEPFYDS-Y----SPVVAMAGAHRVTVPL 139 (411)
T ss_dssp HHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHH-CCTTCEEEEEESCCTT-H----HHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHh-cCCCCEEEEeCCCcHh-H----HHHHHHcCCEEEEeec
Confidence 444444444444457542222 5999999999999999998 88999966 4556664 2 2345678999999998
Q ss_pred cCC--CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCH---HHH-HHHHHcCcEEEEeCCCcCCC----C
Q 037063 257 AWP--NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSY---MWM-SVAAEKGWHVLLDATALGSK----D 326 (588)
Q Consensus 257 ~~~--~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl---~~I-~~a~~~g~~vvvDaa~~~~~----d 326 (588)
+.. ++.+|+++|+++++ +++++|++++++|+||..+|. ++| ++|+++|+++|+|+++.... .
T Consensus 140 ~~~~~~~~~d~~~l~~~l~--------~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~ 211 (411)
T 2o0r_A 140 VPDGRGFALDADALRRAVT--------PRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHAR 211 (411)
T ss_dssp EEETTEEECCHHHHHHHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCC
T ss_pred cccccCCCCCHHHHHHhhc--------cCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC
Confidence 632 35689999999987 679999999999999999996 567 88999999999999976531 0
Q ss_pred CCCC-CCC-CCCCcEEEeccCccCCCCCCc--eEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccC
Q 037063 327 MDTL-GLS-LFKPDFLICSFYKIFGENPSG--FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKF 402 (588)
Q Consensus 327 ~~~l-~l~-~~~~D~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~ 402 (588)
..++ .+. ....|+++.|++|.+| +.| +|++++++++++.+...... ..
T Consensus 212 ~~~~~~~~~~~~~~i~~~s~sK~~~--~~G~r~G~~~~~~~~~~~l~~~~~~--------------------------~~ 263 (411)
T 2o0r_A 212 HLPLAGFDGMAERTITISSAAKMFN--CTGWKIGWACGPAELIAGVRAAKQY--------------------------LS 263 (411)
T ss_dssp CCCGGGSTTTGGGEEEEEEHHHHTT--CTTTCEEEEECCHHHHHHHHHHHHH--------------------------HT
T ss_pred CcChhhccCCCCCEEEEeechhhcC--CccceEEEEeeCHHHHHHHHHHHhh--------------------------cc
Confidence 1111 111 1347999999999998 446 99999988877655432110 01
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeec
Q 037063 403 PESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFD 482 (588)
Q Consensus 403 GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~ 482 (588)
.+.+.... +++..+|+.... .++++.++.+.+++++.+.|.++ +++++.+ ..+.++.+.+.+
T Consensus 264 ~~~~~~~~---~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~----~~g~~~~~~~~~ 325 (411)
T 2o0r_A 264 YVGGAPFQ---PAVALALDTEDA-WVAALRNSLRARRDRLAAGLTEI----------GFAVHDS----YGTYFLCADPRP 325 (411)
T ss_dssp SCCCTTHH---HHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHH----------TCEECCC----CBSSEEEEECGG
T ss_pred CCCChHHH---HHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHHHHc----------CCEecCC----CeeEEEEEecCC
Confidence 11122211 344456654322 36788889999999999999874 3455543 224467777764
Q ss_pred CCCCCcCHHHHHH-HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHH
Q 037063 483 WNGTRIDPALVQK-LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAF 561 (588)
Q Consensus 483 ~~g~~i~~~~v~~-~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~ 561 (588)
..+ .+...+.+ +++++||.++.|..|....... ...+.. .+.++||+|++ ++.|||+++++.
T Consensus 326 ~~~--~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~-----~~~~~~--------~~~~~iRis~~--~~~e~i~~~~~~ 388 (411)
T 2o0r_A 326 LGY--DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQ-----ASQQAD--------VWNHLVRFTFC--KRDDTLDEAIRR 388 (411)
T ss_dssp GTC--CCHHHHHHHHHHHHSEECEEGGGGSCCC-------------C--------CGGGCEEEECC--SCHHHHHHHHHH
T ss_pred CCC--CCHHHHHHHHHHhCCEEEcChhhhCCCcccc-----cccccc--------CCCCeEEEEec--CCHHHHHHHHHH
Confidence 211 34555555 5567899999886653211000 000000 12238999986 489999999999
Q ss_pred HHHhhhhhhccccccc
Q 037063 562 VSRFLDADFVEKERWR 577 (588)
Q Consensus 562 l~~~l~~~~~~~~~~~ 577 (588)
|++++++.-. +-+|.
T Consensus 389 l~~~~~~~~~-~~~~~ 403 (411)
T 2o0r_A 389 LSVLAERPAT-GVPRG 403 (411)
T ss_dssp HGGGGC----------
T ss_pred HHHHHhccCc-CCCcc
Confidence 9998766432 23553
No 86
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.92 E-value=3.7e-23 Score=217.28 Aligned_cols=283 Identities=10% Similarity=0.048 Sum_probs=205.2
Q ss_pred HHHHHHHHH------hCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 183 KIRKRIMDF------MNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 183 ~~r~~ia~~------lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
++|+.++++ ++++++ .|++|+|+++++.+++.++ .++||+|++ ...|++ . ...++..|++++.++
T Consensus 73 ~l~~~la~~l~~~~g~~~~~~--~v~~~~G~~~al~~~~~~l-~~~gd~Vl~~~~~y~~-~----~~~~~~~g~~~~~v~ 144 (369)
T 3cq5_A 73 ELRDELAAYITKQTGVAVTRD--NLWAANGSNEILQQLLQAF-GGPGRTALGFQPSYSM-H----PILAKGTHTEFIAVS 144 (369)
T ss_dssp HHHHHHHHHHHHHHCCCCCGG--GEEEESHHHHHHHHHHHHH-CSTTCEEEEEESSCTH-H----HHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhhhhcccCCCChH--hEEECCChHHHHHHHHHHh-cCCCCEEEEcCCChHH-H----HHHHHHcCCEEEEec
Confidence 667777776 455544 4999999999999999998 889999664 455553 2 234567899999999
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCC-cceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC-CCCCCCC
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKK-KRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK-DMDTLGL 332 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~-~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~-d~~~l~l 332 (588)
.+ +++.+|+++|+++++ + ++++|++++++|+||..+|++++ ++++..++++|+|+++.... +...+.+
T Consensus 145 ~~-~~~~~d~~~l~~~i~--------~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~ 215 (369)
T 3cq5_A 145 RG-ADFRIDMDVALEEIR--------AKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTL 215 (369)
T ss_dssp CC-TTSSCCHHHHHHHHH--------HHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGG
T ss_pred CC-cCCCCCHHHHHHHhh--------ccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHH
Confidence 87 556799999999997 4 68899999999999999999999 99999999999999976542 1111222
Q ss_pred -CCCC-CcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 333 -SLFK-PDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 333 -~~~~-~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
...+ .++++.|++|.+|.+..++|++++++++++.+...... | +.+....
T Consensus 216 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~------------------------~----~~~~~~~ 267 (369)
T 3cq5_A 216 LEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLP------------------------Y----HLSALSQ 267 (369)
T ss_dssp TTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTSCT------------------------T----CSCHHHH
T ss_pred HhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcCCC------------------------C----CCCHHHH
Confidence 2334 57999999999983222379999998887766543211 0 1121111
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCH
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDP 490 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~ 490 (588)
+++..+|+..+ .++++.++.+.+++++.+.|.++ +++++. ..+.++.+.+. .+.
T Consensus 268 ---~a~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~-----~~~~~~~~~~~------~~~ 321 (369)
T 3cq5_A 268 ---AAAIVALRHSA--DTLGTVEKLSVERVRVAARLEEL----------GYAVVP-----SESNFVFFGDF------SDQ 321 (369)
T ss_dssp ---HHHHHHHHTHH--HHHTHHHHHHHHHHHHHHHHHHH----------TCEEEC-----CSSSEEEEECC------SSH
T ss_pred ---HHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHhC----------CCEECC-----CCCeEEEEECC------CCH
Confidence 33345555322 25778888889999999999874 345552 24567777654 246
Q ss_pred HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 491 ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 491 ~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
..+.+.|.++||.++.|.. . +++|+|++ +.+|++++++.|+++++.
T Consensus 322 ~~l~~~l~~~gi~v~~~~~---------------------------~--~~iRis~~---~~~~i~~~~~~l~~~~~~ 367 (369)
T 3cq5_A 322 HAAWQAFLDRGVLIRDVGI---------------------------A--GHLRTTIG---VPEENDAFLDAAAEIIKL 367 (369)
T ss_dssp HHHHHHHHHTTEECBCCSC---------------------------T--TEEEEECC---CHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCEEEEECCC---------------------------C--CeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 6777777889999987610 1 28999998 789999999999988754
No 87
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.92 E-value=1.1e-23 Score=219.14 Aligned_cols=333 Identities=12% Similarity=0.054 Sum_probs=225.2
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
++.+||++...+..++.+++++.+.+.. + . ..|+. ....++++++++
T Consensus 7 ~~~id~~~~~~~~~~~~v~~a~~~~~~~--~--~---------------------------~~~~~--~~~~~~l~~~la 53 (356)
T 1v72_A 7 PPALGFSSDNIAGASPEVAQALVKHSSG--Q--A---------------------------GPYGT--DELTAQVKRKFC 53 (356)
T ss_dssp CCCCBCSCGGGCCCCHHHHHHHHHTTSS--C--C---------------------------CSTTC--SHHHHHHHHHHH
T ss_pred CceEeeccCCccCCCHHHHHHHHhhccC--c--c---------------------------ccccc--chHHHHHHHHHH
Confidence 4678898888888889999987654311 0 0 00111 456789999999
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhc--CCEEEEEeccCCCCccCHHH
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKR--GARVSSAEFAWPNLRIHSGK 267 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~--G~~v~~v~~~~~~~~i~~e~ 267 (588)
+++| . +.+|+||+|+|+|+.+++.++ .++||+|++....|...... ..++.. |++++.++.+ ++.+|+++
T Consensus 54 ~~~g-~--~~~v~~~~~gt~a~~~al~~~-~~~gd~vi~~~~~~~~~~~~--~~~~~~~~g~~~~~v~~~--~~~~d~~~ 125 (356)
T 1v72_A 54 EIFE-R--DVEVFLVPTGTAANALCLSAM-TPPWGNIYCHPASHINNDEC--GAPEFFSNGAKLMTVDGP--AAKLDIVR 125 (356)
T ss_dssp HHHT-S--CCEEEEESCHHHHHHHHHHTS-CCTTEEEEECTTSHHHHSST--THHHHHTTSCEEEECCCG--GGCCCHHH
T ss_pred HHhC-C--CCcEEEeCCccHHHHHHHHHh-cCCCCEEEEcCccchhhhhc--hHHHHHhCCcEEEEecCC--CCeEcHHH
Confidence 9999 3 235999999999999999998 78999977665443212111 013444 9999998875 46799999
Q ss_pred HHH-HHhhhccccCCCcceEEEEeCCCCCCCccCCH---HHH-HHHHHcCcEEEEeCCCcC------CCCCCCCCCCCCC
Q 037063 268 LMK-KIVGKRKKKKKKKRGLFVFPLQSKVTGARYSY---MWM-SVAAEKGWHVLLDATALG------SKDMDTLGLSLFK 336 (588)
Q Consensus 268 l~~-~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl---~~I-~~a~~~g~~vvvDaa~~~------~~d~~~l~l~~~~ 336 (588)
|++ +++.. .....+++++|++++++| ||..+|. ++| ++|+++|+++|+|+++.. +.....+++. ..
T Consensus 126 l~~~~i~~~-~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~ 202 (356)
T 1v72_A 126 LRERTREKV-GDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWK-AG 202 (356)
T ss_dssp HHHHTTSST-TCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGG-GT
T ss_pred HHHHhhhcc-hhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhh-hc
Confidence 999 88610 001112689999999876 9997764 556 889999999999998742 2222222111 24
Q ss_pred CcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHH
Q 037063 337 PDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVE 416 (588)
Q Consensus 337 ~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al 416 (588)
+|++++|+||+ |. |.|+|++++++++++.+..... ..|+...... .+.
T Consensus 203 ~d~~~~s~sK~-g~-~~G~g~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~---~~~ 250 (356)
T 1v72_A 203 VDALSFGATKN-GV-LAAEAIVLFNTSLATEMSYRRK---------------------------RAGHLSSKMR---FLS 250 (356)
T ss_dssp CCEEEECCGGG-TC-SSCEEEEESSGGGHHHHHHHHH---------------------------HTTCCCSSTH---HHH
T ss_pred CCEEEEecccC-CC-cCccEEEEECHHHHhhHHHHhh---------------------------ccCchhhhHH---HHH
Confidence 89999999999 64 8888999988887765542210 0111111111 222
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHH
Q 037063 417 CKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKL 496 (588)
Q Consensus 417 ~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~ 496 (588)
..+++.+..-.+..+.++.+.+++++.+.|.++ ++++++.| ..+.++.+.+. ..+.+.
T Consensus 251 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~----~~~~~~~~~~~---------~~~~~~ 308 (356)
T 1v72_A 251 AQIDAYLTDDLWLRNARKANAAAQRLAQGLEGL---------GGVEVLGG----TEANILFCRLD---------SAMIDA 308 (356)
T ss_dssp HHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTC---------TTEEEESC----CCSSEEEEEEC---------HHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhC---------CCcEEccC----CCccEEEEEcC---------HHHHHH
Confidence 234444433224567788889999999999874 56887765 24566655542 245666
Q ss_pred HHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 497 ADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 497 l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
|.++||.+++|.+ +.+.+|+++++.++.||++++++.|+++++.
T Consensus 309 l~~~gi~v~~g~~----------------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~ 352 (356)
T 1v72_A 309 LLKAGFGFYHDRW----------------------------GPNVVRFVTSFATTAEDVDHLLNQVRLAADR 352 (356)
T ss_dssp HHHTTCBCBCSSS----------------------------STTEEEEECCTTCCHHHHHHHHHHHHHTC--
T ss_pred HHhcCeEEecccc----------------------------CCCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 6788999987631 0128999999999999999999999998764
No 88
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.92 E-value=9.3e-24 Score=224.78 Aligned_cols=294 Identities=13% Similarity=0.082 Sum_probs=203.7
Q ss_pred HHHHHHHHHh----CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 183 KIRKRIMDFM----NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
++|+.+++++ |.+.+...|++|+|+|+|+.+++.++ +++||+|++ ...|++ . ...++..|++++.++.+
T Consensus 82 ~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l-~~~gd~Vl~~~~~~~~-~----~~~~~~~g~~~~~v~~~ 155 (406)
T 1xi9_A 82 ELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGAL-LDPGDEILVPGPSYPP-Y----TGLVKFYGGKPVEYRTI 155 (406)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCHH-H----HHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCCcc-H----HHHHHHcCCEEEEeecC
Confidence 5555555555 43333335999999999999999998 889999664 455553 2 34556789999999987
Q ss_pred C-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCCC------C
Q 037063 258 W-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGSK------D 326 (588)
Q Consensus 258 ~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~~------d 326 (588)
. .++.+|+++|+++++ +++++|++++++|+||..+| +++| ++|+++|+++|+|+++.... .
T Consensus 156 ~~~~~~~d~~~l~~~l~--------~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~ 227 (406)
T 1xi9_A 156 EEEDWQPDIDDIRKKIT--------DRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHIS 227 (406)
T ss_dssp GGGTSEECHHHHHHHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCC
T ss_pred CCcCCcCCHHHHHHhhC--------cCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCC
Confidence 3 245689999999997 57899999999999999998 7777 89999999999999976531 1
Q ss_pred CCCCCCCCCCC-cEEEeccCccCCCCCCc--eEEEE--EeC----cchhcccCCCCCCCceEeeecCCCccccccccccc
Q 037063 327 MDTLGLSLFKP-DFLICSFYKIFGENPSG--FGCLF--VKK----SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDES 397 (588)
Q Consensus 327 ~~~l~l~~~~~-D~vv~S~~K~~G~~P~G--~G~L~--v~~----~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~ 397 (588)
+..++ ... |+++.|++|++| +.| +|+++ .++ ++++.+.....
T Consensus 228 ~~~~~---~~~~~i~~~s~sK~~~--~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~------------------------ 278 (406)
T 1xi9_A 228 PGSLT---KDVPVIVMNGLSKVYF--ATGWRLGYMYFVDPENKLSEVREAIDRLAR------------------------ 278 (406)
T ss_dssp HHHHC---SSSCEEEEEESTTTTC--CGGGCCEEEEEECTTCTTHHHHHHHHHHHH------------------------
T ss_pred HHHcC---CCceEEEEeccccccC--CCccEEEEEEEecCchhHHHHHHHHHHHHH------------------------
Confidence 11111 235 889999999998 446 89999 777 66655432110
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE
Q 037063 398 SQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA 477 (588)
Q Consensus 398 ~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~ 477 (588)
+ . ++.+.... +++.++|+...+ +++++.++.+.+++++.+.|.++ |+++++.| .++++.
T Consensus 279 -~-~-~~~~~~~~---~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~~-----~~~~~~ 337 (406)
T 1xi9_A 279 -I-R-LCPNTPAQ---FAAIAGLTGPMD-YLKEYMKKLKERRDYIYKRLNEI---------PGISTTKP-----QGAFYI 337 (406)
T ss_dssp -H-T-CCSCSHHH---HHHHHHHHSCCH-HHHHHHHHHHHHHHHHHHHHHTS---------TTEECCCC-----CBSSEE
T ss_pred -h-h-cCCCHHHH---HHHHHHHhCCcH-HHHHHHHHHHHHHHHHHHHHHhC---------CCCeeecC-----CeeEEE
Confidence 0 1 12222221 344455542212 26778888899999999999874 56776543 244444
Q ss_pred E-EeecCCCCCcCHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHH
Q 037063 478 F-NVFDWNGTRIDPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDT 555 (588)
Q Consensus 478 f-~~~~~~g~~i~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv 555 (588)
+ .+....+ .+...+.+.| +++||.+++|..|.. .+..+||+|++ ++.|||
T Consensus 338 ~~~~~~~~~--~~~~~l~~~l~~~~gi~v~~g~~f~~------------------------~~~~~lRis~~--~~~~~i 389 (406)
T 1xi9_A 338 FPKIEVGPW--KNDKEFVLDVLHNAHVLFVHGSGFGE------------------------YGAGHFRAVFL--PPIEIL 389 (406)
T ss_dssp CCEECSCSC--SSHHHHHHHHHHHHCEECEEGGGGCG------------------------GGTTBEEEECC--SCHHHH
T ss_pred EEecCccCC--CCHHHHHHHHHHhCCEEEeCchhcCC------------------------CCCCEEEEEec--CCHHHH
Confidence 3 4432101 3466665554 589999998865521 11128999998 899999
Q ss_pred HHHHHHHHHhhhh
Q 037063 556 YRLWAFVSRFLDA 568 (588)
Q Consensus 556 ~~li~~l~~~l~~ 568 (588)
+++++.|++++++
T Consensus 390 ~~~~~~l~~~l~~ 402 (406)
T 1xi9_A 390 EEAMDRFEKFMKE 402 (406)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998865
No 89
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.92 E-value=5.3e-24 Score=225.46 Aligned_cols=289 Identities=16% Similarity=0.127 Sum_probs=201.2
Q ss_pred HHHHHHHHHh----CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 183 KIRKRIMDFM----NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
++|+.+++++ |++.+...|++|+|+|+|+.+++.++ +++||+|+ ....|++ . ...++..|++++.++.+
T Consensus 82 ~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l-~~~gd~Vl~~~~~~~~-~----~~~~~~~g~~~~~v~~~ 155 (389)
T 1o4s_A 82 ELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMAL-LDPGDEVIVFSPVWVS-Y----IPQIILAGGTVNVVETF 155 (389)
T ss_dssp HHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT-H----HHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHh-CCCCCEEEEcCCCchh-H----HHHHHHcCCEEEEEecC
Confidence 5666666665 76322235999999999999999999 88999966 4555654 2 23456789999999987
Q ss_pred CC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCCCC-CCCC-
Q 037063 258 WP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGSKD-MDTL- 330 (588)
Q Consensus 258 ~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~~d-~~~l- 330 (588)
.. ++.+|+++|+++++ +++++|++++++|+||..+| +++| ++|+++|+++|+|+++..... -...
T Consensus 156 ~~~~~~~d~~~l~~~l~--------~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~ 227 (389)
T 1o4s_A 156 MSKNFQPSLEEVEGLLV--------GKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTS 227 (389)
T ss_dssp GGGTTCCCHHHHHHTCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCC
T ss_pred CccCCCCCHHHHHHhcc--------cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCC
Confidence 32 45689999999887 57899999999999999999 7778 899999999999999765411 0011
Q ss_pred --CCC-CCCCcEEEeccCccCCCCCCc--eEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 331 --GLS-LFKPDFLICSFYKIFGENPSG--FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 331 --~l~-~~~~D~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
.+. ..+.|+++.|++|++| +.| +|++++++++++.+.....++ ..+++
T Consensus 228 ~~~~~~~~~~~i~~~s~sK~~~--~~G~r~G~l~~~~~~~~~l~~~~~~~-------------------------~~~~~ 280 (389)
T 1o4s_A 228 ILDVSEGFDRIVYINGFSKSHS--MTGWRVGYLISSEKVATAVSKIQSHT-------------------------TSCIN 280 (389)
T ss_dssp HHHHCSSSTTEEEEEESTTTTT--CGGGCCEEEECCHHHHHHHHHHHHHH-------------------------TCSCC
T ss_pred HhhcCCCCCcEEEEeechhhcC--CcccceEEEEeCHHHHHHHHHHhhhc-------------------------ccCCC
Confidence 111 1357999999999998 446 899999988776654332110 00111
Q ss_pred CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCC
Q 037063 406 SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNG 485 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g 485 (588)
.+ +...++..++. +++++.++++.+++++.+.|.++ +++++.| ..+.++.+.+.
T Consensus 281 ~~-------~~~a~~~~l~~-~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~----~~~~~~~~~~~---- 334 (389)
T 1o4s_A 281 TV-------AQYAALKALEV-DNSYMVQTFKERKNFVVERLKKM----------GVKFVEP----EGAFYLFFKVR---- 334 (389)
T ss_dssp HH-------HHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHT----------TCCCCCC----SBSSEEEEECS----
T ss_pred HH-------HHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhc----------CCeeecC----CcceEEEEeCC----
Confidence 11 11123333332 46888899999999999999885 2333333 12334444443
Q ss_pred CCcCHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 486 TRIDPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 486 ~~i~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
.+...+.+.| +++||.++.|..|.. .+ +||+|++ ++.+|++++++.|.+
T Consensus 335 --~~~~~l~~~l~~~~gi~v~~g~~f~~------------------------~~--~~Ris~~--~~~~~l~~~l~~l~~ 384 (389)
T 1o4s_A 335 --GDDVKFCERLLEEKKVALVPGSAFLK------------------------PG--FVRLSFA--TSIERLTEALDRIED 384 (389)
T ss_dssp --SCHHHHHHHHHHHHCEECEEGGGGTC------------------------TT--EEEEECC--SCHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHCCEEEeCchhcCC------------------------CC--eEEEEEe--CCHHHHHHHHHHHHH
Confidence 2356666555 588999998854410 12 8999998 499999999999998
Q ss_pred hhhh
Q 037063 565 FLDA 568 (588)
Q Consensus 565 ~l~~ 568 (588)
++++
T Consensus 385 ~l~~ 388 (389)
T 1o4s_A 385 FLNS 388 (389)
T ss_dssp HHTC
T ss_pred HHhc
Confidence 7753
No 90
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.92 E-value=2.8e-23 Score=219.76 Aligned_cols=306 Identities=14% Similarity=0.101 Sum_probs=207.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.....++|++|+++++++ +.|+|++| |+|+.+++.++ +++||+|+ ....|++ .+..+...++..|++++.++.
T Consensus 51 ~~~~~~l~~~la~~~~~~---~~i~~~sG-t~a~~~~~~~~-~~~g~~vl~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~ 124 (386)
T 1cs1_A 51 NPTRDVVQRALAELEGGA---GAVLTNTG-MSAIHLVTTVF-LKPGDLLVAPHDCYGG-SYRLFDSLAKRGCYRVLFVDQ 124 (386)
T ss_dssp CHHHHHHHHHHHHHHTCS---EEEEESSH-HHHHHHHHHHH-CCTTCEEEEETTCCHH-HHHHHHHHHTTTSCEEEEECT
T ss_pred CccHHHHHHHHHHHhCCC---cEEEeCCH-HHHHHHHHHHH-hCCCCEEEEecCCcHh-HHHHHHHHHHhcCCEEEEeCC
Confidence 466789999999999985 34666555 99999999998 88999966 4556665 444445566788999999876
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ |.++|+++|+ +++++|++++++|+||.+.|+++| ++|+++|+++|+|+++..+....++ .+
T Consensus 125 ~------d~~~l~~~i~--------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~---~~ 187 (386)
T 1cs1_A 125 G------DEQALRAALA--------EKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPL---AL 187 (386)
T ss_dssp T------CHHHHHHHHH--------TCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG---GG
T ss_pred C------CHHHHHHhhc--------cCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCcc---cc
Confidence 3 7899999998 689999999999999999999999 9999999999999998876321222 24
Q ss_pred CCcEEEeccCccCCCCCCce--EEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 336 KPDFLICSFYKIFGENPSGF--GCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~--G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
++|+++.|+||++|. |.+. |++++++ ++++.+.+...++ .++.+....
T Consensus 188 ~~di~~~s~sK~~~~-~~~~~~G~~~~~~~~l~~~l~~~~~~~--------------------------~~~~~~~~~-- 238 (386)
T 1cs1_A 188 GADLVLHSCTKYLNG-HSDVVAGVVIAKDPDVVTELAWWANNI--------------------------GVTGGAFDS-- 238 (386)
T ss_dssp TCSEEEEETTTTTTC-SSCCCCEEEEESSHHHHHHHHHHHHHH--------------------------TCBCCHHHH--
T ss_pred CceEEEEcCcccccC-CCCceeEEEEeCcHHHHHHHHHHHHhc--------------------------CCCCCHHHH--
Confidence 589999999998874 6553 9999987 6766665332110 111221111
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEE-EeCCCC------------CCCcccEEEEE
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVR-IYGPKV------------MFDRGPSLAFN 479 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~-i~~p~~------------~~~rg~iv~f~ 479 (588)
++...+++. ++...++....++++.+.|.++ +.++ ++.+.- ....+++++|.
T Consensus 239 -~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~---------~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 303 (386)
T 1cs1_A 239 -YLLLRGLRT-----LVPRMELAQRNAQAIVKYLQTQ---------PLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFE 303 (386)
T ss_dssp -HHHHHHHTT-----HHHHHHHHHHHHHHHHHHHTTC---------TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEE
T ss_pred -HHHHhcccH-----HHHHHHHHHHHHHHHHHHHhcC---------CCeEEEECCCCCCCccHHHHHHhcCCCceEEEEE
Confidence 122233432 2334445555666666777664 2232 222210 01357899998
Q ss_pred eecCCCCCcCHHHHHHHHHhCCcEecc---c------cccCccc-ccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC
Q 037063 480 VFDWNGTRIDPALVQKLADRHNISLSC---G------FLQNIFF-SGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL 549 (588)
Q Consensus 480 ~~~~~g~~i~~~~v~~~l~~~gI~v~~---G------~~c~~~~-~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~ 549 (588)
+.+ . .+.+.+.|.+.||.++. | ++|.... +... ...+... | ...+.||+|++..
T Consensus 304 ~~~-----~-~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~----~~~~~~~---g---~~~~~iRis~~~~ 367 (386)
T 1cs1_A 304 LDG-----D-EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMA----PEARAAA---G---ISETLLRISTGIE 367 (386)
T ss_dssp ESS-----C-HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSC----HHHHHHH---T---CCTTEEEEECCSS
T ss_pred ECC-----C-HHHHHHHHHhCCcceEcccCCCcceeeecccccccccCC----HHHHHhc---C---CCCCeEEEEEccC
Confidence 764 2 56788889999999873 4 3443211 0000 0011110 0 1123999999999
Q ss_pred CCHHHHHHHHHHHHHhh
Q 037063 550 TNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 550 ~t~eDv~~li~~l~~~l 566 (588)
++.++|+++.++|+++.
T Consensus 368 ~~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 368 DGEDLIADLENGFRAAN 384 (386)
T ss_dssp CHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhh
Confidence 99999999999998764
No 91
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.92 E-value=3.4e-24 Score=227.82 Aligned_cols=350 Identities=11% Similarity=0.008 Sum_probs=221.7
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
....|.|+.+.+..-+.+.+++. . +.++++ ...|+....+..+++|++++
T Consensus 25 ~~~~~~d~~~~~~~~~~~~~~~~-~-----~~~~~~------------------------~~~~~~~~~~~~~~l~~~la 74 (398)
T 2rfv_A 25 GALSTPIFQTSTFVFDSAEQGAA-R-----FALEES------------------------GYIYTRLGNPTTDALEKKLA 74 (398)
T ss_dssp CCSSCCCCCCSBCCCSSHHHHHH-H-----C-----------------------------CCSBTTTCCHHHHHHHHHHH
T ss_pred CCcCCCCcCCCccccCCHHHHHH-h-----hcCCCC------------------------CCceeCCCChHHHHHHHHHH
Confidence 35788999999988877777653 1 122211 00112112567789999999
Q ss_pred HHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHH
Q 037063 190 DFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKL 268 (588)
Q Consensus 190 ~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l 268 (588)
+++|++ .+++++++++|+.+++.++ +++||+|++ ...|++ ....+..+++..|++++.++.+ |.++|
T Consensus 75 ~~~g~~----~~i~~~sG~~a~~~~l~~~-~~~gd~vi~~~~~~~~-~~~~~~~~~~~~g~~~~~v~~~------d~~~l 142 (398)
T 2rfv_A 75 VLERGE----AGLATASGISAITTTLLTL-CQQGDHIVSASAIYGC-THAFLSHSMPKFGINVRFVDAA------KPEEI 142 (398)
T ss_dssp HHHTCS----EEEEESSHHHHHHHHHHHH-CCTTCEEEEESSSCHH-HHHHHHTHHHHTTCEEEEECTT------SHHHH
T ss_pred HHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEcCCCccc-HHHHHHHHHHHcCCEEEEeCCC------CHHHH
Confidence 999985 2666677789999999998 889999664 555654 3333344557789999999874 78999
Q ss_pred HHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCCCcEEEeccCcc
Q 037063 269 MKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFKPDFLICSFYKI 347 (588)
Q Consensus 269 ~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~~D~vv~S~~K~ 347 (588)
+++++ +++++|++++++|+||.++|+++| ++|+++|+++|+|+++..+.....+. +++|+++.|+||+
T Consensus 143 ~~~i~--------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~---~~~di~~~s~sK~ 211 (398)
T 2rfv_A 143 RAAMR--------PETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQ---LGADIVVHSVTKY 211 (398)
T ss_dssp HHHCC--------TTEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGG---GTCSEEEEETTTT
T ss_pred HHhcC--------CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCchh---hCCcEEEEeCccc
Confidence 99887 689999999999999999999999 99999999999999988663112222 3489999999998
Q ss_pred CCCCCCc--eEEEEEeCcchh-cccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHH
Q 037063 348 FGENPSG--FGCLFVKKSSAS-VLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHAD 424 (588)
Q Consensus 348 ~G~~P~G--~G~L~v~~~~~~-~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~ 424 (588)
+|. |.+ .|+++++++.++ .+++...+ + +.++.+.... +++.++++.+
T Consensus 212 ~~~-~g~~~~G~~~~~~~~~~~~~~~~~~~------------------------~-~~~~~~~~~~---~~~~~~l~~~- 261 (398)
T 2rfv_A 212 ING-HGDVIGGIIVGKQEFIDQARFVGLKD------------------------I-TGGCMSPFNA---WLTLRGVKTL- 261 (398)
T ss_dssp TTC-SSCCCCEEEEECHHHHHHHHHTHHHH------------------------T-TCCCCCHHHH---HHHHHHHTTH-
T ss_pred ccC-CCCceEEEEEECHHHHHHHHHHHHHh------------------------C-CCCCCCHHHH---HHHHhhhhhH-
Confidence 874 554 599999988765 44432211 0 0122332221 3333455433
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHccc------CCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHH
Q 037063 425 ALGLILISNRARYLINWLANALMNLH------HPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLAD 498 (588)
Q Consensus 425 ~~G~~~i~~r~~~L~~~l~~~L~~L~------h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~ 498 (588)
+...++....++.+.+.|.+.. ++.-+ ..|+++++.|.. ...++++.|.+.+ . .....++++
T Consensus 262 ----~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~-~~p~~~~~~~~~-~~~g~~~~~~~~~-----~-~~~~~~l~~ 329 (398)
T 2rfv_A 262 ----GIRMERHCENALKIARFLEGHPSITRVYYPGLS-SHPQYELGQRQM-SLPGGIISFEIAG-----G-LEAGRRMIN 329 (398)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTST-TSTTHHHHHHHC-SSCCSEEEEEETT-----H-HHHHHHHHT
T ss_pred ----HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCC-CCccHHHHHhhC-CCCceEEEEEEcC-----C-HHHHHHHHH
Confidence 2223333444555555565531 00000 012333333211 1357899998764 1 234555665
Q ss_pred hC---CcEeccccc------cCcccccchHHHHHHHHhhhcCCCCCcCC--ccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 499 RH---NISLSCGFL------QNIFFSGEYEQERVRVLETRSGTNETRSG--VSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 499 ~~---gI~v~~G~~------c~~~~~~~~~~~~~~~l~~~~~~~~~~~g--~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
+. ||.++.|.. |......... ...+.. .| .+.||+|++..++.++|++++++|++.
T Consensus 330 ~~~~~~i~~~~G~~~~li~~~~~~~~~~~~---~~~~~~--------~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 330 SVELCLLAVSLGDTETLIQHPASMTHSPVA---PEERLK--------AGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp TCSSSEECSCCSSSSCEEECHHHHTSSSSC---HHHHHH--------TTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred hCCcceeccCCCCcceeeecccccccccCC---HHHHHh--------cCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 54 777777743 3211000000 011111 23 249999999999999999999998763
No 92
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.92 E-value=9.2e-23 Score=215.58 Aligned_cols=327 Identities=10% Similarity=0.022 Sum_probs=218.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....++|+.+++++|.+ .+++|+|+|+|+.+++.++.+++||+|+ ....|++ . ...++..|++++.++++
T Consensus 39 ~~~~~l~~~la~~~~~~----~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~-~----~~~~~~~g~~~~~v~~~ 109 (393)
T 1mdo_A 39 PKNQELEAAFCRLTGNQ----YAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVS-T----LNMIVLLGANPVMVDVD 109 (393)
T ss_dssp HHHHHHHHHHHHHHCCS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHH-H----HHHHHHTTCEEEEECBC
T ss_pred hHHHHHHHHHHHHhCCC----cEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHh-H----HHHHHHCCCEEEEEecc
Confidence 45679999999999984 3999999999999999998778999966 4556654 2 23456789999999998
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC--CCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK--DMDTLGLSL 334 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~--d~~~l~l~~ 334 (588)
..++.+|+++|+++|+ +++++|+++ |++|...|+++| ++|+++|+++|+|+++..+. +..+++.
T Consensus 110 ~~~~~~d~~~l~~~l~--------~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~-- 176 (393)
T 1mdo_A 110 RDTLMVTPEHIEAAIT--------PQTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGA-- 176 (393)
T ss_dssp TTTCCBCHHHHHHHCC--------TTEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEETTS--
T ss_pred CCcCCCCHHHHHHhcC--------CCceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECCeecCC--
Confidence 4446799999999997 578888875 479999999999 99999999999999988651 1222321
Q ss_pred CCCcEEEeccC--ccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccc--cCCC-CCcc
Q 037063 335 FKPDFLICSFY--KIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS--KFPE-SSIS 408 (588)
Q Consensus 335 ~~~D~vv~S~~--K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~--e~GT-~~~~ 408 (588)
.|++++|+| |+++ +...|+++.+ +++++.+.+....+ +..+... . .....+ ..|+ +.|+ ..+.
T Consensus 177 --~d~~~~S~~k~K~l~--~~~~g~~~~~~~~~~~~l~~~~~~~-~~~~~~~----~-~~~~~~-~~~~~~~~g~~~~~~ 245 (393)
T 1mdo_A 177 --RGTAIFSFHAIKNIT--CAEGGIVVTDNPQFADKLRSLKFHG-LGVDAWD----R-QSGGRA-PQAEVLAPGYKYNLP 245 (393)
T ss_dssp --SSEEEEECCTTSSSC--SSSCEEEEESCHHHHHHHHHHTBTT-EECC-----------------CCEESSCCCBCCCC
T ss_pred --CCeEEEeCCCCCccc--cccceEEEeCCHHHHHHHHHHHhcC-Ccccchh----h-hccccc-ccccccccCccCCCC
Confidence 799999999 8777 4357888886 56777665433221 1111000 0 000000 0221 2333 2223
Q ss_pred chhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCC--CCCcccEEEEEeecC-CC
Q 037063 409 GVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKV--MFDRGPSLAFNVFDW-NG 485 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~--~~~rg~iv~f~~~~~-~g 485 (588)
.+ ....++..++ +++++.++.+.+++++.+.|.++ + ++++++.. ....+.++.+.+.+. .|
T Consensus 246 ~~----~~a~~~~~l~--~~~~~~~~~~~~~~~l~~~L~~~---------~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 309 (393)
T 1mdo_A 246 DL----NAAIALAQLQ--KLDALNARRAAIAAQYHQAMADL---------P-FQPLSLPSWEHIHAWHLFIIRVDEARCG 309 (393)
T ss_dssp HH----HHHHHHHHHH--THHHHHHHHHHHHHHHHHHHHTS---------S-CEECCCCSSCEECCCSCEEEECCHHHHS
T ss_pred HH----HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcC---------C-cccccCCCCCCCceeEEEEEEecccccc
Confidence 22 1123333343 36788888889999999999884 4 66664321 112234677776520 01
Q ss_pred CCcCHHHHHHHHHhCCcEeccccccCcccccchHH-------HHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHH
Q 037063 486 TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQ-------ERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRL 558 (588)
Q Consensus 486 ~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~-------~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~l 558 (588)
++...+.+.|.++||.++.|..|.+... .+.. .....+ +...||++++.++|.+||+++
T Consensus 310 --~~~~~l~~~l~~~gi~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~lRi~~~~~~t~~~i~~~ 375 (393)
T 1mdo_A 310 --ITRDALMASLKTKGIGTGLHFRAAHTQK-YYRERFPTLTLPDTEWN-----------SERICSLPLFPDMTESDFDRV 375 (393)
T ss_dssp --SCHHHHHHHHHHTTBCCBCCCCCGGGSH-HHHHHSTTCCCHHHHHH-----------HTTEEEECCCTTCCHHHHHHH
T ss_pred --cCHHHHHHHHHhCCCCcccccCccccCh-hhhccCCccCChhHHHH-----------HhCEEEecCCCCCCHHHHHHH
Confidence 4577888888889999999876632110 0000 000000 112899999999999999999
Q ss_pred HHHHHHhhhh
Q 037063 559 WAFVSRFLDA 568 (588)
Q Consensus 559 i~~l~~~l~~ 568 (588)
++.|+++++.
T Consensus 376 ~~~l~~~~~~ 385 (393)
T 1mdo_A 376 ITALHQIAGQ 385 (393)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHhc
Confidence 9999988765
No 93
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.92 E-value=1.5e-24 Score=230.07 Aligned_cols=301 Identities=14% Similarity=0.124 Sum_probs=209.8
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
.++|+.+++++|+++++ |++|+|+++|+.+++.++ .++||+|++. ..|++ . ...++..|++++.++.+ ++
T Consensus 77 ~~l~~~la~~~g~~~~~--v~~~~g~~~al~~~~~~~-~~~gd~Vl~~~p~y~~-~----~~~~~~~g~~~~~~~~~-~~ 147 (397)
T 2zyj_A 77 APLRAFVAEWIGVRPEE--VLITTGSQQALDLVGKVF-LDEGSPVLLEAPSYMG-A----IQAFRLQGPRFLTVPAG-EE 147 (397)
T ss_dssp HHHHHHHHHHHTSCGGG--EEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCHH-H----HHHHHTTCCEEEEEEEE-TT
T ss_pred HHHHHHHHHHhCCChhh--EEEeccHHHHHHHHHHHh-CCCCCEEEEeCCCcHH-H----HHHHHHcCCEEEecCcC-CC
Confidence 58999999999986654 999999999999999998 7899997654 44543 2 34556789999999987 44
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEE-EEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCCCcCCC-CCC-CCCCC
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLF-VFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDATALGSK-DMD-TLGLS 333 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv-~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa~~~~~-d~~-~l~l~ 333 (588)
+ +|+++|+++++. .++++| ++++++|+||..+|.+ +| ++|+++|+++|+|+++.... +-. ...+.
T Consensus 148 ~-~d~~~l~~~l~~-------~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~ 219 (397)
T 2zyj_A 148 G-PDLDALEEVLKR-------ERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLF 219 (397)
T ss_dssp E-ECHHHHHHHHHH-------CCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHH
T ss_pred C-CCHHHHHHHHhh-------cCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchh
Confidence 4 899999999972 267776 6799999999999977 56 88999999999999976531 001 11111
Q ss_pred CC------CCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCc
Q 037063 334 LF------KPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSI 407 (588)
Q Consensus 334 ~~------~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~ 407 (588)
.+ ..++++.|++|++| +..++|++++++++++.+...... + ..+++.+
T Consensus 220 ~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~~------------------------~-~~~~~~~ 273 (397)
T 2zyj_A 220 ELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQKLVQAKQG------------------------A-DLHTPML 273 (397)
T ss_dssp HHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHHHHHHHHHHHHH------------------------H-HSSCCHH
T ss_pred hhCcccCCCeEEEEeccccccc-ccceeEEEecCHHHHHHHHHHHHh------------------------h-cCCCCHH
Confidence 11 23488999999998 345689999998877666432211 0 1122221
Q ss_pred cchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC-eEEEeCCCCCCCcccEEEEEeecCCCC
Q 037063 408 SGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIP-LVRIYGPKVMFDRGPSLAFNVFDWNGT 486 (588)
Q Consensus 408 ~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~-~v~i~~p~~~~~rg~iv~f~~~~~~g~ 486 (588)
.. +++..+|+......++++.++.+++++++.+.|.++ .| +++++.| ..+.++.+.+.+ +
T Consensus 274 ~~----~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--------~~~g~~~~~~----~~g~~~~~~~~~--~- 334 (397)
T 2zyj_A 274 NQ----MLVHELLKEGFSERLERVRRVYREKAQAMLHALDRE--------VPKEVRYTRP----KGGMFVWMELPK--G- 334 (397)
T ss_dssp HH----HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH--------SCTTSEECCC----SBSSEEEEECST--T-
T ss_pred HH----HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH--------CCCCeEEccC----CccEEEEEEcCC--C-
Confidence 11 233344432110125677788888888999988873 24 4666554 235666666653 1
Q ss_pred CcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 487 RIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 487 ~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
++...+.+.|.++||.+++|..|... ..+.++||+|++.. +.+||+++++.|++++
T Consensus 335 -~~~~~~~~~l~~~gi~v~~g~~f~~~----------------------~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l 390 (397)
T 2zyj_A 335 -LSAEGLFRRALEENVAFVPGGPFFAN----------------------GGGENTLRLSYATL-DREGIAEGVRRLGRAL 390 (397)
T ss_dssp -CCHHHHHHHHHHTTEEEEESGGGCTT----------------------SCCTTEEEEECSSS-CHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHCCCEEechHHhcCC----------------------CCCCCeEEEEcCCC-CHHHHHHHHHHHHHHH
Confidence 45677777777779999988655210 01223899999986 8999999999999987
Q ss_pred hh
Q 037063 567 DA 568 (588)
Q Consensus 567 ~~ 568 (588)
++
T Consensus 391 ~~ 392 (397)
T 2zyj_A 391 KG 392 (397)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 94
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.92 E-value=3.4e-23 Score=218.89 Aligned_cols=292 Identities=14% Similarity=0.096 Sum_probs=198.6
Q ss_pred HHHHHHHHHh----CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 183 KIRKRIMDFM----NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
++|+.|++++ |++.+...|++|+|+|+|+.+++.++ +++||+|++ ...|+. + ...++..|++++.++.+
T Consensus 72 ~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~Vlv~~p~y~~--~---~~~~~~~g~~~~~v~~~ 145 (385)
T 1b5p_A 72 ELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAI-LDPGDEVIVLSPYWVS--Y---PEMVRFAGGVVVEVETL 145 (385)
T ss_dssp HHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTH--H---HHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHh-cCCCCEEEEcCCCchh--H---HHHHHHcCCEEEEeecC
Confidence 5566666655 54322335999999999999999999 899999664 445543 2 34556789999999997
Q ss_pred C-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCC-CC--CCC
Q 037063 258 W-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGS-KD--MDT 329 (588)
Q Consensus 258 ~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~-~d--~~~ 329 (588)
. .+..+|+++|+++++ +++++|++++++|+||..+| +++| ++|+++|++||+|+++... .+ ..+
T Consensus 146 ~~~~~~~d~~~l~~~l~--------~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 217 (385)
T 1b5p_A 146 PEEGFVPDPERVRRAIT--------PRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFS 217 (385)
T ss_dssp GGGTTCCCHHHHHTTCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCC
T ss_pred cccCCCCCHHHHHHhcC--------CCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCC
Confidence 4 245689999998887 67899999999999999999 5667 8899999999999995542 10 111
Q ss_pred -CCCCCCCCcEEEeccCccCCCCCCc--eEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 330 -LGLSLFKPDFLICSFYKIFGENPSG--FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 330 -l~l~~~~~D~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
..+.. ..++++.|++|.+| +.| +|++++++++++.+.+....+ ..+++.
T Consensus 218 ~~~~~~-~~~i~~~s~SK~~~--~~G~RiG~~~~~~~~~~~l~~~~~~~-------------------------~~~~~~ 269 (385)
T 1b5p_A 218 PGRVAP-EHTLTVNGAAKAFA--MTGWRIGYACGPKEVIKAMASVSRQS-------------------------TTSPDT 269 (385)
T ss_dssp GGGTCT-TTEEEEEESTTTTT--CGGGCCEEEECCHHHHHHHHHHHHTT-------------------------TCSCCH
T ss_pred HHHcCC-CCEEEEEechhhcC--CcccceEEEEeCHHHHHHHHHHHhhc-------------------------cCCCCH
Confidence 11211 36899999999999 446 999999888776654322110 001111
Q ss_pred ccchhhHHHHHHHHHH---HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc-EEEEEeec
Q 037063 407 ISGVSSKLVECKGLDH---ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP-SLAFNVFD 482 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~---l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~-iv~f~~~~ 482 (588)
+.+ .++..+|+. ... .++++.++.++.++++.+.|.++ +++++.| .++ .+...+..
T Consensus 270 ~~~----~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~-----~~~~~~~~~~~~ 329 (385)
T 1b5p_A 270 IAQ----WATLEALTNQEASRA-FVEMAREAYRRRRDLLLEGLTAL----------GLKAVRP-----SGAFYVLMDTSP 329 (385)
T ss_dssp HHH----HHHHHHHHCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH----------TCCBCCC-----SBTTEEEEECTT
T ss_pred HHH----HHHHHHHhCCCcchH-HHHHHHHHHHHHHHHHHHHHHHC----------CCeecCC-----CeeEEEEEecCC
Confidence 111 233345542 122 15777888888889999998874 2334433 233 33334431
Q ss_pred CCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHH
Q 037063 483 WNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 483 ~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l 562 (588)
.| ++...+.+.|.++||.++.|..|.. . ++||+|++ ++.++++++++.|
T Consensus 330 -~~--~~~~~l~~~l~~~gv~v~~g~~f~~------------------------~--~~iRis~~--~~~~~i~~~l~~l 378 (385)
T 1b5p_A 330 -IA--PDEVRAAERLLEAGVAVVPGTDFAA------------------------F--GHVRLSYA--TSEENLRKALERF 378 (385)
T ss_dssp -TC--SSHHHHHHHHHHTTEECEESGGGTC------------------------T--TEEEEECC--SCHHHHHHHHHHG
T ss_pred -CC--CCHHHHHHHHHHCCeEEecccccCC------------------------C--CeEEEEec--CCHHHHHHHHHHH
Confidence 11 4566776666689999998865520 1 28999987 7999999999998
Q ss_pred HHhhh
Q 037063 563 SRFLD 567 (588)
Q Consensus 563 ~~~l~ 567 (588)
+++++
T Consensus 379 ~~~l~ 383 (385)
T 1b5p_A 379 ARVLG 383 (385)
T ss_dssp GGGC-
T ss_pred HHHHh
Confidence 87764
No 95
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.92 E-value=1.4e-23 Score=223.87 Aligned_cols=304 Identities=11% Similarity=0.026 Sum_probs=207.8
Q ss_pred HHHHHHHHHHhC------------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcC
Q 037063 182 SKIRKRIMDFMN------------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRG 248 (588)
Q Consensus 182 ~~~r~~ia~~lg------------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G 248 (588)
.++|+.|+++++ +++++ |++|+|+|+|+.+++.++ +++||+|++ ...|++ . ...++..|
T Consensus 78 ~~lr~~la~~~~~~~~~~~~~~~~~~~~~--v~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~y~~-~----~~~~~~~g 149 (416)
T 1bw0_A 78 PEAREAVATWWRNSFVHKEELKSTIVKDN--VVLCSGGSHGILMAITAI-CDAGDYALVPQPGFPH-Y----ETVCKAYG 149 (416)
T ss_dssp HHHHHHHHHHHHHHHCCSTTTGGGCCGGG--EEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTH-H----HHHHHHTT
T ss_pred HHHHHHHHHHHHhhhcccccCCCCCCcce--EEEeCChHHHHHHHHHHh-CCCCCEEEEcCCCcHh-H----HHHHHHcC
Confidence 478888888887 55554 999999999999999999 889999664 455653 2 34556789
Q ss_pred CEEEEEeccCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcC
Q 037063 249 ARVSSAEFAWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALG 323 (588)
Q Consensus 249 ~~v~~v~~~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~ 323 (588)
++++.++++.. ++.+|+++|+++++ +++++|++++++|+||.++| +++| ++|+++|++||+|+++..
T Consensus 150 ~~~~~v~~~~~~~~~~d~~~l~~~l~--------~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 221 (416)
T 1bw0_A 150 IGMHFYNCRPENDWEADLDEIRRLKD--------DKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAG 221 (416)
T ss_dssp CEEEEEEEEGGGTTEECHHHHHHHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTT
T ss_pred cEEEEeecCcccCCCCCHHHHHHHhc--------cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccc
Confidence 99999998632 35689999999987 67899999999999999999 7778 899999999999999654
Q ss_pred C----C----CCCCC-CCCCCCCcEEEeccCccCCCCCCceEEEEEeCc--chhcccCCCCCCCceEeeecCCCcccccc
Q 037063 324 S----K----DMDTL-GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKS--SASVLSGSTSSVSTIMGIEPSFSEIIELE 392 (588)
Q Consensus 324 ~----~----d~~~l-~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~--~~~~l~~~~~g~~g~v~~~~~~~~~~~~~ 392 (588)
. . ...++ .+.....++++.|++|.||.+..++|+++++++ +++.+...... +
T Consensus 222 ~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~----------------~- 284 (416)
T 1bw0_A 222 MVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKR----------------V- 284 (416)
T ss_dssp CBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHH----------------H-
T ss_pred cccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHH----------------H-
Confidence 2 1 11111 122222357888999988742234899999874 44433211000 0
Q ss_pred cccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCc
Q 037063 393 TLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDR 472 (588)
Q Consensus 393 ~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~r 472 (588)
.. ..++.+.... +++..+|+.....+++++.++++.+++++.+.|.++ ++++++.| ..
T Consensus 285 -----~~-~~~~~~~~~~---~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~----~~ 342 (416)
T 1bw0_A 285 -----GM-LVCGPCTVVQ---AALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGEC---------IGLAPTMP----RG 342 (416)
T ss_dssp -----HH-HHTCSCHHHH---HHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTS---------TTEEECCC----CB
T ss_pred -----hc-cccCCCcHHH---HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC---------CCCcccCC----Ce
Confidence 00 0112232222 444455553222246788889999999999999874 56777654 23
Q ss_pred ccEEEEEeecCC-CCCcCHHHHHH-HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCC
Q 037063 473 GPSLAFNVFDWN-GTRIDPALVQK-LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLT 550 (588)
Q Consensus 473 g~iv~f~~~~~~-g~~i~~~~v~~-~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~ 550 (588)
+.++.+.+.... ....+...+.+ +++++||.+++|..|. ..+++|+|++ +
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~--------------------------~~~~iRis~~--~ 394 (416)
T 1bw0_A 343 AMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFH--------------------------APGFTRLTTT--R 394 (416)
T ss_dssp TTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGT--------------------------CTTEEEEECC--S
T ss_pred eEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccC--------------------------CCCeEEEEec--C
Confidence 555666664210 00123555544 5578999999885541 1128999996 6
Q ss_pred CHHHHHHHHHHHHHhhhh
Q 037063 551 NFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 551 t~eDv~~li~~l~~~l~~ 568 (588)
+.|+++++++.|.+++++
T Consensus 395 ~~e~l~~~l~~l~~~l~~ 412 (416)
T 1bw0_A 395 PVEVYREAVERIKAFCQR 412 (416)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 899999999999988765
No 96
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.92 E-value=2e-23 Score=218.45 Aligned_cols=286 Identities=11% Similarity=0.053 Sum_probs=200.2
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCC-CeEEEcC-CCchhHHHHHHHHHHhcCCEEEEEeccCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSN-PRLLTVY-DHENEAAALMIESSKKRGARVSSAEFAWP 259 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~g-d~ll~~~-e~~s~~~~~~~~~a~~~G~~v~~v~~~~~ 259 (588)
.++|+.|++++++++++ |++|+|+++++.+++.++ .++| |+|++.. .|+. . ...++..|++++.++.+ +
T Consensus 61 ~~lr~~la~~~~~~~~~--v~~~~G~~~ai~~~~~~~-~~~g~d~Vl~~~p~~~~-~----~~~~~~~g~~~~~v~~~-~ 131 (356)
T 1fg7_A 61 KAVIENYAQYAGVKPEQ--VLVSRGADEGIELLIRAF-CEPGKDAILYCPPTYGM-Y----SVSAETIGVECRTVPTL-D 131 (356)
T ss_dssp HHHHHHHHHHHTSCGGG--EEEESHHHHHHHHHHHHH-CCTTTCEEEECSSSCTH-H----HHHHHHHTCEEEECCCC-T
T ss_pred HHHHHHHHHHhCCChHH--EEEcCCHHHHHHHHHHHH-hCCCCCEEEEeCCChHH-H----HHHHHHcCCEEEEeeCC-C
Confidence 58999999999997655 999999999999999998 7899 9977554 4443 2 23455679999999987 5
Q ss_pred CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH--cCcEEEEeCCCcCCC-CCCCCCC-CC
Q 037063 260 NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE--KGWHVLLDATALGSK-DMDTLGL-SL 334 (588)
Q Consensus 260 ~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~--~g~~vvvDaa~~~~~-d~~~l~l-~~ 334 (588)
++.+|.++|+++++ ++++|++++++|+||.++|.++| ++++. +|+++|+|+++.... ...-..+ ..
T Consensus 132 ~~~~d~~~l~~~i~---------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 202 (356)
T 1fg7_A 132 NWQLDLQGISDKLD---------GVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAE 202 (356)
T ss_dssp TSCCCHHHHHTSCT---------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTT
T ss_pred CCCCCHHHHHHHhc---------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcCCCcHHHHHhh
Confidence 66788888876553 58999999999999999998886 44433 899999999976421 0111121 23
Q ss_pred CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHH
Q 037063 335 FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKL 414 (588)
Q Consensus 335 ~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~ 414 (588)
++.++++.|++|++|.+..++|++++++++++.+...... | +.+.... +
T Consensus 203 ~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~------------------------~----~~~~~~~---~ 251 (356)
T 1fg7_A 203 YPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAP------------------------Y----PLSTPVA---D 251 (356)
T ss_dssp CTTEEEEEESSSTTCCGGGCCEEEEECHHHHHHHHHHSCS------------------------S----CSCHHHH---H
T ss_pred CCCEEEEecchHhhcCchhhhEEEEeCHHHHHHHHHhcCC------------------------C----CCCHHHH---H
Confidence 4468999999999983222379999988877665432211 0 1111111 2
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHH
Q 037063 415 VECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQ 494 (588)
Q Consensus 415 al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~ 494 (588)
+..++|+......++++.++.+++++++.+.|.++ +++..+.| ..+.++.+.+. +...+.
T Consensus 252 a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~~----~~~~~~~~~~~-------~~~~l~ 311 (356)
T 1fg7_A 252 IAAQALSPQGIVAMRERVAQIIAEREYLIAALKEI---------PCVEQVFD----SETNYILARFK-------ASSAVF 311 (356)
T ss_dssp HHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHS---------TTEEEECC----CSSSEEEEEET-------THHHHH
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhC---------CCceEECC----CCCeEEEEECC-------CHHHHH
Confidence 23344432111015777888889999999999885 33333333 24567766664 256677
Q ss_pred HHHHhCCcEecc-ccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 495 KLADRHNISLSC-GFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 495 ~~l~~~gI~v~~-G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
+.|.++||.++. |..|. .. +++|+|++ +.+|++++++.|+++
T Consensus 312 ~~L~~~gI~v~~~g~~~~------------------------~~--~~iRis~~---~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 312 KSLWDQGIILRDQNKQPS------------------------LS--GCLRITVG---TREESQRVIDALRAE 354 (356)
T ss_dssp HHHHHTTEECEECTTSTT------------------------CT--TEEEEECC---CHHHHHHHHHHHHTC
T ss_pred HHHHHCCEEEEECCCCCC------------------------CC--CeEEEEeC---CHHHHHHHHHHHHhh
Confidence 777889999998 75441 01 28999987 689999999998865
No 97
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.92 E-value=4.9e-24 Score=226.58 Aligned_cols=308 Identities=14% Similarity=0.077 Sum_probs=198.8
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 177 ESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 177 ~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.....+++|++|++++|++ + +++++++|+|+++++. + +++||+|++ ...|++ ...++...++..|++++.++
T Consensus 53 ~~~~~~~lr~~la~~~g~~---~-~i~~~sGt~a~~~al~-~-~~~gd~Vi~~~~~y~~-~~~~~~~~~~~~G~~v~~v~ 125 (393)
T 1n8p_A 53 QNPNRENLERAVAALENAQ---Y-GLAFSSGSATTATILQ-S-LPQGSHAVSIGDVYGG-THRYFTKVANAHGVETSFTN 125 (393)
T ss_dssp CCHHHHHHHHHHHHHTTCS---E-EEEESCHHHHHHHHHH-T-SCSSCEEEEESSCCHH-HHHHHHHTSTTTCSCCEEES
T ss_pred CChhHHHHHHHHHHHhCCC---c-EEEECChHHHHHHHHH-H-cCCCCEEEEeCCCchH-HHHHHHHHHHHcCcEEEEeC
Confidence 3567889999999999985 2 4555555999999999 7 899999664 445554 44443445677899999988
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc----CcEEEEeCCCcCCCCCCCC
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK----GWHVLLDATALGSKDMDTL 330 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~----g~~vvvDaa~~~~~d~~~l 330 (588)
++ | ++|+++|+ +++++|++++++|+||.++|+++| ++|+++ |+++|+|+++..+.....+
T Consensus 126 ~~------d-~~l~~~i~--------~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~~~~ 190 (393)
T 1n8p_A 126 DL------L-NDLPQLIK--------ENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPL 190 (393)
T ss_dssp SH------H-HHHHHHSC--------SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCCGG
T ss_pred CC------h-HHHHHhcc--------cCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccCCHH
Confidence 74 5 78888887 689999999999999999999999 999999 9999999998875211122
Q ss_pred CCCCCCCcEEEeccCccCCCCCCc--e-EEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 331 GLSLFKPDFLICSFYKIFGENPSG--F-GCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 331 ~l~~~~~D~vv~S~~K~~G~~P~G--~-G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
.+++|+++.|+||++| |.| + |+++++ +++++.+...... ..++.+
T Consensus 191 ---~~~~di~~~S~sK~~g--~~G~rigG~~~~~~~~~~~~l~~~~~~--------------------------~g~~~~ 239 (393)
T 1n8p_A 191 ---NFGADIVVHSATKYIN--GHSDVVLGVLATNNKPLYERLQFLQNA--------------------------IGAIPS 239 (393)
T ss_dssp ---GGTCSEEEEETTTTTT--CSSCCCCEEEEESCHHHHHHHHHHHHH--------------------------HCCCCC
T ss_pred ---HcCCeEEEEECccccc--CCCCceeEEEEeCCHHHHHHHHHHHHh--------------------------cCCCCC
Confidence 2249999999999999 667 6 888886 5665555422100 011111
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCe-E-EEeCCCCC------------CC-
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPL-V-RIYGPKVM------------FD- 471 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~-v-~i~~p~~~------------~~- 471 (588)
.... +++..+++.+ ....++....+..+.+.|.+. +. + +++-|... ..
T Consensus 240 ~~~~---~~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~---------~~~l~~v~~p~l~~~~~~~~~~~~~~~~ 302 (393)
T 1n8p_A 240 PFDA---WLTHRGLKTL-----HLRVRQAALSANKIAEFLAAD---------KENVVAVNYPGLKTHPNYDVVLKQHRDA 302 (393)
T ss_dssp HHHH---HHHHHHHTTH-----HHHHHHHHHHHHHHHHHHTSC---------TTTEEEEECTTSTTSTTHHHHHHHSGGG
T ss_pred HHHH---HHHHhccchH-----HHHHHHHHHHHHHHHHHHHhC---------CCCceEEECCCCCCCccHHHHHhhCCCC
Confidence 1111 2222344332 333344444555566666653 22 2 33333210 01
Q ss_pred c-ccEEEEEeecCCCCCcCHHHHHHHHHhC---CcEeccccccCcccccchHHHHHHHHhhhcCC-CCCcCCc--cEEEE
Q 037063 472 R-GPSLAFNVFDWNGTRIDPALVQKLADRH---NISLSCGFLQNIFFSGEYEQERVRVLETRSGT-NETRSGV--SVVTA 544 (588)
Q Consensus 472 r-g~iv~f~~~~~~g~~i~~~~v~~~l~~~---gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~-~~~~~g~--~~vRv 544 (588)
. +++++|.+.+ ......++++.. +|.++.|..|+........ ....... .....|. +.||+
T Consensus 303 ~~~~i~~~~l~~------~~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~------~h~~~~~~~~~~~g~~~~~iRl 370 (393)
T 1n8p_A 303 LGGGMISFRIKG------GAEAASKFASSTRLFTLAESLGGIESLLEVPAVM------THGGIPKEAREASGVFDDLVRI 370 (393)
T ss_dssp CCCSEEEEEESS------CHHHHHHHHHHCSSSEECSCCCCSSCEEECTTTT------TSCSSCTTTTTTTSCCTTEEEE
T ss_pred CCccEEEEEeCC------cHHHHHHHHhhCCcceECCCCCCCcceeeccccc------cccccCHHHHHhcCCCCCeEEE
Confidence 4 7899999864 134445555544 5567788777643210000 0000000 0001332 39999
Q ss_pred ecCCCCCHHHHHHHHHHHHHhh
Q 037063 545 ALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 545 Slg~~~t~eDv~~li~~l~~~l 566 (588)
|+|.++++++|+.+.++|+++.
T Consensus 371 S~g~~~~~~~i~~l~~al~~~~ 392 (393)
T 1n8p_A 371 SVGIEDTDDLLEDIKQALKQAT 392 (393)
T ss_dssp ECCSSCHHHHHHHHHHHHHHHH
T ss_pred EEccCCHHHHHHHHHHHHHHhh
Confidence 9999999999999999998754
No 98
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.92 E-value=2.9e-23 Score=217.90 Aligned_cols=314 Identities=11% Similarity=0.009 Sum_probs=216.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....++|+.++++++.+ .+++++|+|+|+.+++.++.+++||+|+ ....|++ . ...++..|++++.++++
T Consensus 38 ~~~~~l~~~la~~~~~~----~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~-~----~~~~~~~g~~~~~~~~~ 108 (374)
T 3uwc_A 38 AELEKFEKRFAALHNAP----HAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIA-S----VGAIVQAGATPVLVDSE 108 (374)
T ss_dssp HHHHHHHHHHHHHTTCS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHH-H----HHHHHHTTCEEEEECBC
T ss_pred hhHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHH-H----HHHHHHcCCEEEEEecC
Confidence 45679999999999985 3999999999999999998788999966 4555654 2 23456789999999998
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC--CCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK--DMDTLGLSL 334 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~--d~~~l~l~~ 334 (588)
.++.+|+++|+++++ +++++|+ ++|+||...|+++| ++|+++|+++|+|+++..+. +...++
T Consensus 109 -~~~~~d~~~l~~~~~--------~~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~--- 173 (374)
T 3uwc_A 109 -NGYVIDPEKIEAAIT--------DKTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDKFVG--- 173 (374)
T ss_dssp -TTSSBCGGGTGGGCC--------TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETT---
T ss_pred -CCCCcCHHHHHHhCC--------CCceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeecc---
Confidence 778899999998887 6788887 77899999999999 99999999999999987752 122222
Q ss_pred CCCcEEEeccC--ccCCCCC-CceEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccc-cCCCCCccc
Q 037063 335 FKPDFLICSFY--KIFGENP-SGFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS-KFPESSISG 409 (588)
Q Consensus 335 ~~~D~vv~S~~--K~~G~~P-~G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~-e~GT~~~~~ 409 (588)
..+|++++|+| |++| + ...|+++.++ ++.+.+.....+ +... .|. ...+.++..
T Consensus 174 ~~~d~~~~s~~~~K~l~--~~g~~g~~~~~~~~~~~~~~~~~~~--~~~~-----------------~~~~~~~~~~~~~ 232 (374)
T 3uwc_A 174 SWGQFACFSLHPLKNLN--VWSDAGVIITHSDEYAEKLRLYRNH--GLIN-----------------RDVCVEYGINCRM 232 (374)
T ss_dssp SSSSEEEEECSSSSSSC--CSSCCEEEEESCHHHHHHHHHHTBT--TEEE-----------------TTEESSCCCBCBC
T ss_pred ccccEEEEeCCCCCcCC--ccceeEEEEeCCHHHHHHHHHHHhc--Cccc-----------------cCccccccccCCC
Confidence 11699999988 9888 4 3367777666 344555443322 1110 010 111222221
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCe-EEEeCCCCCCCcccEEEEEeecCCCCCc
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPL-VRIYGPKVMFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~-v~i~~p~~~~~rg~iv~f~~~~~~g~~i 488 (588)
..+..++......+++.+.++.+.+++++.+.|.++ +. +++..+.. .....++.|.+.. .
T Consensus 233 ----~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~-----~ 293 (374)
T 3uwc_A 233 ----DTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDL---------SEFIDVPVRRE-GVYHVFHIYVLRV-----K 293 (374)
T ss_dssp ----CHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGG---------TTTEECCCCCT-TEECCCSSEEEEE-----T
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---------CCeEEeccCCC-CCceeeEEEEEEc-----C
Confidence 234455555555567889999999999999999885 44 55533211 1112223344443 2
Q ss_pred CHHHHHHHHHhCCcEecccc----ccCccccc-----chHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHH
Q 037063 489 DPALVQKLADRHNISLSCGF----LQNIFFSG-----EYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLW 559 (588)
Q Consensus 489 ~~~~v~~~l~~~gI~v~~G~----~c~~~~~~-----~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li 559 (588)
+...+.+.|.++||.++.|. +|.+.+.. ... .....+. ...||++++.++|.|||++++
T Consensus 294 ~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----------~~~lrl~~~~~~t~edi~~~~ 361 (374)
T 3uwc_A 294 YRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDF-PMAEKHG-----------EAVITLPAHPYLTEEEINYII 361 (374)
T ss_dssp THHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSC-HHHHHHH-----------HHEEEECCCTTSCHHHHHHHH
T ss_pred CHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCC-ccHHHHH-----------hCEEEccCCCCCCHHHHHHHH
Confidence 46778888888999999885 33221110 000 0001111 128999999999999999999
Q ss_pred HHHHHhhhh
Q 037063 560 AFVSRFLDA 568 (588)
Q Consensus 560 ~~l~~~l~~ 568 (588)
+.|++++++
T Consensus 362 ~~l~~~l~~ 370 (374)
T 3uwc_A 362 KKVREFYLE 370 (374)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999998865
No 99
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.92 E-value=2.9e-23 Score=218.37 Aligned_cols=298 Identities=12% Similarity=0.035 Sum_probs=204.5
Q ss_pred HHHHHHHHHHHHh----CCCCCCc-eEEEecCHHHHHHHHHHhCCCCCCCeEEEcC-CCchhHHHHHHHHHHhcCCEEEE
Q 037063 180 LESKIRKRIMDFM----NISEDDY-TLVFTANQSSAFKLLAESYPFYSNPRLLTVY-DHENEAAALMIESSKKRGARVSS 253 (588)
Q Consensus 180 ~~~~~r~~ia~~l----ga~~~e~-~vvft~g~T~al~lv~~s~~~~~gd~ll~~~-e~~s~~~~~~~~~a~~~G~~v~~ 253 (588)
...++|+.|++++ |++.+.. .|+||+|+|+|+.+++.++ .++||+|++.. .|+. . ...++..|++++.
T Consensus 64 ~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~p~y~~-~----~~~~~~~g~~~~~ 137 (376)
T 2dou_A 64 CTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLAL-TEPEDLLLLPEVAYPS-Y----FGAARVASLRTFL 137 (376)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHH-CCTTCEEEEESSCCHH-H----HHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHh-cCCCCEEEECCCCcHh-H----HHHHHHcCCEEEE
Confidence 3567888888887 8753222 5999999999999999998 88999976544 4443 2 3445678999999
Q ss_pred EeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCCCcCCC-C--
Q 037063 254 AEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDATALGSK-D-- 326 (588)
Q Consensus 254 v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa~~~~~-d-- 326 (588)
++.+ .+..+|+++|++++. +++++|++++++|+||.++|.+ +| ++|+++|+++|+|+++.... +
T Consensus 138 ~~~~-~~~~~d~~~l~~~l~--------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 208 (376)
T 2dou_A 138 IPLR-EDGLADLKAVPEGVW--------REAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGE 208 (376)
T ss_dssp ECBC-TTSSBCGGGSCHHHH--------HHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSC
T ss_pred eeCC-CCCCCCHHHHHHhhc--------cCceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC
Confidence 9983 444589999999987 5789999999999999999954 46 78999999999999976521 0
Q ss_pred -CCCCCC-CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 327 -MDTLGL-SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 327 -~~~l~l-~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
...+.+ .....++++.|++|.+|.++.++|++++++++++.+...... ...+
T Consensus 209 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~--------------------------~~~~ 262 (376)
T 2dou_A 209 APSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGV--------------------------IDFN 262 (376)
T ss_dssp CCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHHHHH--------------------------HCCC
T ss_pred CCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHHHHh--------------------------cccC
Confidence 111222 123467899999999883223479999988887766432211 0011
Q ss_pred CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCC
Q 037063 405 SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWN 484 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~ 484 (588)
.+.... +++..+|+.... .++++.++.+.+++++.+.|.+ . ++++.+ ..+.++.+.+.+
T Consensus 263 ~~~~~~---~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~---------~--~~~~~~----~~~~~~~~~~~~-- 321 (376)
T 2dou_A 263 QYAGVL---RMGVEALKTPKE-VVRGYARVYRERALGMAEALKG---------V--LSLLPP----RATMYLWGRLPE-- 321 (376)
T ss_dssp SCHHHH---HHHHHHHTSCHH-HHHHHHHHHHHHHHHHHHHHTT---------T--SEECCC----CBSSEEEEECCT--
T ss_pred CCHHHH---HHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHHH---------h--cCccCC----CeeEEEEEECCC--
Confidence 222221 334445543222 2577788888889999998876 2 445433 123345566643
Q ss_pred CCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 485 GTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 485 g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
+ ++...+.+.|.++||.++.|..|.. .+.++||+|++. +.+|++++++.|++
T Consensus 322 ~--~~~~~~~~~l~~~gi~v~~g~~f~~------------------------~~~~~~Ris~~~--~~~~i~~~l~~l~~ 373 (376)
T 2dou_A 322 G--VDDLEFGLRLVERGVALAPGRGFGP------------------------GGKGFVRIALVR--PLEELLEAAKRIRE 373 (376)
T ss_dssp T--CCHHHHHHHHHHTTEECEEGGGGCG------------------------GGTTEEEEECCS--CHHHHHHHHHHHHH
T ss_pred C--CCHHHHHHHHHHCCEEEcCchhhCC------------------------CCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 1 4566676666667999998865521 111289999985 88999999999988
Q ss_pred hhh
Q 037063 565 FLD 567 (588)
Q Consensus 565 ~l~ 567 (588)
+++
T Consensus 374 ~l~ 376 (376)
T 2dou_A 374 ALD 376 (376)
T ss_dssp TC-
T ss_pred HhC
Confidence 763
No 100
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.92 E-value=3.6e-23 Score=221.73 Aligned_cols=309 Identities=9% Similarity=0.006 Sum_probs=207.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCc-eEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 179 ELESKIRKRIMDFMNISEDDY-TLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~-~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++.+.+.+.+.+.+|.+.+.. .|+||+|+|+|+.+++.++ .++||+|++ ...|+. . ...++..|++++.++.
T Consensus 81 ~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~-~~~gd~Vl~~~p~y~~-~----~~~~~~~g~~~~~~~~ 154 (429)
T 1yiz_A 81 RLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGH-VDEGDEVIIIEPFFDC-Y----EPMVKAAGGIPRFIPL 154 (429)
T ss_dssp HHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT-H----HHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCchh-H----HHHHHHcCCEEEEEeC
Confidence 344444444444457532223 4999999999999999998 789999664 445553 2 2345668999999998
Q ss_pred cCC---------CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcC
Q 037063 257 AWP---------NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALG 323 (588)
Q Consensus 257 ~~~---------~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~ 323 (588)
+.. ++.+|+++|+++++ +++++|++++++|+||.++| +++| ++|+++|+++|+|+++..
T Consensus 155 ~~~~~~~~~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 226 (429)
T 1yiz_A 155 KPNKTGGTISSADWVLDNNELEALFN--------EKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEH 226 (429)
T ss_dssp BCCCSSSSEEGGGCBCCHHHHHHHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred CcccccccccccCcccCHHHHHHHhc--------cCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccc
Confidence 743 35689999999987 68999999999999999997 6677 899999999999999764
Q ss_pred C----CCCCCC-CCC-CCCCcEEEeccCccCCCCCCc--eEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccc
Q 037063 324 S----KDMDTL-GLS-LFKPDFLICSFYKIFGENPSG--FGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLD 395 (588)
Q Consensus 324 ~----~d~~~l-~l~-~~~~D~vv~S~~K~~G~~P~G--~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~ 395 (588)
. ....++ .+. ....|+++.|++|.+| +.| +|++++++++++.+......
T Consensus 227 ~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~--~~G~r~G~~~~~~~~~~~l~~~~~~--------------------- 283 (429)
T 1yiz_A 227 MVFEPFEHIRICTLPGMWERTITIGSAGKTFS--LTGWKIGWAYGPEALLKNLQMVHQN--------------------- 283 (429)
T ss_dssp CBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHT--CGGGCCEEEESCHHHHHHHHHHHHT---------------------
T ss_pred cccCCCCCcChhhccCCcCceEEEecchhccC--CCCcceEEEEeCHHHHHHHHHHHhh---------------------
Confidence 2 111111 121 2447999999999998 557 99999998877665432110
Q ss_pred ccccccCCCCCccchhhHHHHHHHHHH-----H--HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCC
Q 037063 396 ESSQSKFPESSISGVSSKLVECKGLDH-----A--DALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKV 468 (588)
Q Consensus 396 ~~~f~e~GT~~~~~~~~~~al~~aL~~-----l--~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~ 468 (588)
...+.+.... +++..+|+. . .. .++++.++.+.+++++.+.|.++ +++++.+
T Consensus 284 -----~~~~~~~~~~---~a~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~-- 342 (429)
T 1yiz_A 284 -----CVYTCATPIQ---EAIAVGFETELKRLKSPEC-YFNSISGELMAKRDYMASFLAEV----------GMNPTVP-- 342 (429)
T ss_dssp -----TTCCCCHHHH---HHHHHHHHHHHTTTTSTTS-HHHHHHHHHHHHHHHHHHHHHHH----------TCEEEEC--
T ss_pred -----cccCCChHHH---HHHHHHHhcccccccchHH-HHHHHHHHHHHHHHHHHHHHHhC----------CCcccCC--
Confidence 0111222211 344455554 1 11 16788889999999999999885 2445544
Q ss_pred CCCcccEEEEEeecCCC--------CCcCHHHHHH-HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCc
Q 037063 469 MFDRGPSLAFNVFDWNG--------TRIDPALVQK-LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGV 539 (588)
Q Consensus 469 ~~~rg~iv~f~~~~~~g--------~~i~~~~v~~-~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~ 539 (588)
..+.++.+.+.+... ...+...+.+ +++++||.+++|..+.... ... .+.
T Consensus 343 --~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~------------~~~-------~~~ 401 (429)
T 1yiz_A 343 --QGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEP------------NKH-------LGE 401 (429)
T ss_dssp --SBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGG------------GGG-------GTT
T ss_pred --CcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCc------------ccC-------CCC
Confidence 234577777754210 0023445554 5568999999875442100 000 112
Q ss_pred cEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 540 SVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 540 ~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
++||+|++ ++.+||+++++.|++++++
T Consensus 402 ~~iRis~~--~~~e~i~~~l~~l~~~l~~ 428 (429)
T 1yiz_A 402 DFVRYCFF--KKDENLQKAAEILRKWKGS 428 (429)
T ss_dssp TEEEEECC--SCHHHHHHHHHHHHHHSCC
T ss_pred CeEEEEec--CCHHHHHHHHHHHHHhccC
Confidence 38999998 4899999999999998764
No 101
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.92 E-value=5.5e-23 Score=217.34 Aligned_cols=301 Identities=13% Similarity=0.096 Sum_probs=200.9
Q ss_pred HHHHHHHH----hCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEeccC
Q 037063 184 IRKRIMDF----MNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEFAW 258 (588)
Q Consensus 184 ~r~~ia~~----lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~~~ 258 (588)
+|+.|+++ +|.+.+...|++|+|+|+|+.+++.++ .++||+|++. ..|++ . ...++..|++++.+|.+.
T Consensus 69 lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l-~~~gd~vl~~~p~y~~-~----~~~~~~~g~~~~~v~~~~ 142 (390)
T 1d2f_A 69 FLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQW-SETGEGVVIHTPAYDA-F----YKAIEGNQRTVMPVALEK 142 (390)
T ss_dssp HHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHS-SCTTCEEEEEESCCHH-H----HHHHHHTTCEEEEEECEE
T ss_pred HHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCCcHH-H----HHHHHHCCCEEEEeeccc
Confidence 55555555 473222335999999999999999999 7899997654 44543 2 344567899999999873
Q ss_pred CC--CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCCC-C-CCCC
Q 037063 259 PN--LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGSK-D-MDTL 330 (588)
Q Consensus 259 ~~--~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~~-d-~~~l 330 (588)
.+ ..+|+++|+++++. .++++|++++++|+||.++| +++| ++|+++|+++|+|+++.... + ....
T Consensus 143 ~~~~~~~d~~~l~~~l~~-------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~ 215 (390)
T 1d2f_A 143 QADGWFCDMGKLEAVLAK-------PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHI 215 (390)
T ss_dssp CSSSEECCHHHHHHHHTS-------TTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCC
T ss_pred CCCccccCHHHHHHHhcc-------CCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCc
Confidence 32 25899999999971 37899999999999999999 6777 89999999999999976521 0 0111
Q ss_pred CCCCC--C-CcEEEeccCccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 331 GLSLF--K-PDFLICSFYKIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 331 ~l~~~--~-~D~vv~S~~K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
.+... . .|. +.|++|.+|.+..++|+++++ +++++.+.....+. + ..++.+
T Consensus 216 ~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~-----------------------~-~~~~~~ 270 (390)
T 1d2f_A 216 PWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGR-----------------------D-GLSSPS 270 (390)
T ss_dssp CGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTT-----------------------S-CCCSCC
T ss_pred CHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhh-----------------------c-ccCCCC
Confidence 11111 1 277 999999988322237999996 46655554322100 0 112333
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE-EEEeecCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL-AFNVFDWNG 485 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv-~f~~~~~~g 485 (588)
..+. +++..+++..... ++++.++.+.+++++.+.|.+. .|+++++.+ .++++ .+.+.+. |
T Consensus 271 ~~~~---~a~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~--------~~~~~~~~~-----~~~~~~~~~~~~~-~ 332 (390)
T 1d2f_A 271 VLAL---TAHIAAYQQGAPW-LDALRIYLKDNLTYIADKMNAA--------FPELNWQIP-----QSTYLAWLDLRPL-N 332 (390)
T ss_dssp HHHH---HHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHH--------CSSCCCCCC-----SBCSEEEEECGGG-C
T ss_pred HHHH---HHHHHHHhcCHHH-HHHHHHHHHHHHHHHHHHHHhh--------CCCCEEecC-----CccEEEEEEcccc-C
Confidence 3332 3444556542222 6778888899999999999872 144555443 34444 4566531 1
Q ss_pred CCcCHHHHHHHHH-hCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 486 TRIDPALVQKLAD-RHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 486 ~~i~~~~v~~~l~-~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
++...+.+.|. ++||.+++|..|.+ .+.++||+|++. +.++++++++.|++
T Consensus 333 --~~~~~l~~~l~~~~gi~v~~g~~f~~------------------------~~~~~~Ris~~~--~~~~l~~~l~~l~~ 384 (390)
T 1d2f_A 333 --IDDNALQKALIEQEKVAIMPGYTYGE------------------------EGRGFVRLNAGC--PRSKLEKGVAGLIN 384 (390)
T ss_dssp --CCHHHHHHHHHHTTCEECEEGGGGCG------------------------GGTTEEEEECCS--CHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHcCEEeeCccccCC------------------------CCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 34666666665 78999999866521 111289999986 58999999999998
Q ss_pred hhhh
Q 037063 565 FLDA 568 (588)
Q Consensus 565 ~l~~ 568 (588)
++++
T Consensus 385 ~l~~ 388 (390)
T 1d2f_A 385 AIRA 388 (390)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8754
No 102
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.92 E-value=4.2e-23 Score=219.94 Aligned_cols=292 Identities=13% Similarity=0.080 Sum_probs=207.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccC
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAW 258 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~ 258 (588)
+..+++++++++++|++ . .+++.++|+|+..++.++ +++||.|+++...|.... ..++..|++++.++.
T Consensus 104 ~~~~~l~~~la~~~g~~---~-~i~~~sGt~a~~~~l~~~-~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~~~~-- 172 (409)
T 3kki_A 104 YDKPMIEKRLAKFTGFD---E-CLLSQSGWNANVGLLQTI-CQPNTNVYIDFFAHMSLW----EGARYANAQAHPFMH-- 172 (409)
T ss_dssp TTSCHHHHHHHHHHTCS---E-EEEESCHHHHHHHHHHHH-CCTTCEEEEETTSCHHHH----HHHHHTTCEEEEECT--
T ss_pred HHHHHHHHHHHHHhCCC---e-EEEecchHHHHHHHHHHh-cCCCCEEEECCCcCHHHH----HHHHHcCCeEEEecC--
Confidence 34458999999999985 2 455566679999898988 899999776554443232 334557998887754
Q ss_pred CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCC-------CCCC
Q 037063 259 PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKD-------MDTL 330 (588)
Q Consensus 259 ~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d-------~~~l 330 (588)
+|+++|+++|.+ .++++|++++++|+||.+.|+++| ++|+++|++||+|+++..+.- ....
T Consensus 173 ----~d~~~le~~l~~-------~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~ 241 (409)
T 3kki_A 173 ----NNCDHLRMLIQR-------HGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAEL 241 (409)
T ss_dssp ----TCHHHHHHHHHH-------HCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHH
T ss_pred ----CCHHHHHHHHHh-------cCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhc
Confidence 578999999982 247999999999999999999999 999999999999999865310 0112
Q ss_pred CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 331 GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 331 ~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
++. ..+|+++.|++|.+|. . .|+++.++++++.+....... .| .++.+...
T Consensus 242 ~~~-~~~di~~~s~sK~~~~--~-gg~v~~~~~~~~~~~~~~~~~----------------------~~--~~~~~~~~- 292 (409)
T 3kki_A 242 GLT-REVHFMTASLAKTFAY--R-AGAIWCNNEVNRCVPFISYPA----------------------IF--SSTLLPYE- 292 (409)
T ss_dssp TCG-GGCSEEEEESSSTTCS--S-CEEEEESSSGGGTHHHHCHHH----------------------HH--SBCCCHHH-
T ss_pred CCC-CCCCEEEeecchhhCC--C-ceEEEECHHHHHHHHHhCcCc----------------------cc--cCCCcHHH-
Confidence 221 2489999999999984 3 499999988876554321100 01 11122222
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCH
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDP 490 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~ 490 (588)
.+++.++++.++.. +.+.++.+++++++.+.|.++ | +++. ..+.++.+.+.+. .+.
T Consensus 293 --~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~-------g---~~~~------~~~~~~~~~~~~~----~~~ 348 (409)
T 3kki_A 293 --AAGLETTLEIIESA--DNRRQHLDRMARKLRIGLSQL-------G---LTIR------SESQIIGLETGDE----RNT 348 (409)
T ss_dssp --HHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHTT-------T---CCCC------CSSSEEEEEEESH----HHH
T ss_pred --HHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-------C---CccC------CCCCEEEEEeCCH----HHH
Confidence 25666788887764 778889999999999999986 2 2222 2467888877641 124
Q ss_pred HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 491 ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 491 ~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
..+.+.|.++||.++.++.... ..+..+||++++.+++.|||+++++.|+++++.
T Consensus 349 ~~~~~~L~~~Gv~v~~~~~~~~-----------------------~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 349 EKVRDYLESNGVFGSVFCRPAT-----------------------SKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp HHHHHHHHHTTEECEEECTTSS-----------------------CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCceEeeeCCCCc-----------------------CCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 4566667777999876533210 123349999999999999999999999998764
No 103
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.92 E-value=5.4e-23 Score=224.27 Aligned_cols=321 Identities=12% Similarity=0.067 Sum_probs=218.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCC--------ceEEEecCHHHHHHHHHHhCCC------------------CCCCeEEE-cC
Q 037063 178 SELESKIRKRIMDFMNISEDD--------YTLVFTANQSSAFKLLAESYPF------------------YSNPRLLT-VY 230 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e--------~~vvft~g~T~al~lv~~s~~~------------------~~gd~ll~-~~ 230 (588)
.++++++.+++++++|.+.+. ...+||+|+|+|+.+++.+..- .++++|++ ..
T Consensus 117 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~ 196 (481)
T 4e1o_A 117 TELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQ 196 (481)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETT
T ss_pred HHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCc
Confidence 688889999999999996431 1589999999998766654311 14556664 45
Q ss_pred CCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHH
Q 037063 231 DHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAA 309 (588)
Q Consensus 231 e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~ 309 (588)
.|.+ . .+.++..|++++.+|++ +++.+|+++|+++|++. +.....+.+|++++.+|++|.+.|+++| ++|+
T Consensus 197 ~H~s-~----~~~~~~~g~~~~~v~~~-~~~~~d~~~Le~~i~~~--~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~ 268 (481)
T 4e1o_A 197 AHSS-V----EKAGLISLVKMKFLPVD-DNFSLRGEALQKAIEED--KQRGLVPVFVCATLGTTGVCAFDCLSELGPICA 268 (481)
T ss_dssp SCHH-H----HHHHHHHTCEEEEECCC-TTSCCCHHHHHHHHHHH--HHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred chHH-H----HHHHHhCCCceEEEEcC-CCCcCCHHHHHHHHHHH--HhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHH
Confidence 5553 2 23345579999999998 78899999999999731 1122347889999999999999999999 9999
Q ss_pred HcCcEEEEeCCCcCCC----CCCCC--CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcch-h-ccc--CCCCCCCceE
Q 037063 310 EKGWHVLLDATALGSK----DMDTL--GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSA-S-VLS--GSTSSVSTIM 379 (588)
Q Consensus 310 ~~g~~vvvDaa~~~~~----d~~~l--~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~-~-~l~--~~~~g~~g~v 379 (588)
++|++++||+++..+. ....+ ++ ..+|++++++||+++. |.|+|+++++++.. . .+. +.+......
T Consensus 269 ~~~~~lhvDaA~g~~~~~~~~~~~~~~gi--~~aDsi~~~~hK~l~~-p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~- 344 (481)
T 4e1o_A 269 REGLWLHIDAAYAGTAFLCPEFRGFLKGI--EYADSFTFNPSKWMMV-HFDCTGFWVKDKYKLQQTFSVNPIYLRHANS- 344 (481)
T ss_dssp HHTCEEEEECTTGGGGGGSGGGGGGGTTG--GGCSEEEECHHHHSSC-CSSCEEEEESBHHHHHTTTCCCCGGGCCTTT-
T ss_pred HcCCeEEeehhhHHHHHhChhhHHHhcCc--ccCCEEEEChHHhcCC-CCceEEEEEeCHHHHHHHhcCCchhccCccc-
Confidence 9999999999976541 11111 22 1369999999998875 99999999998643 1 111 111110000
Q ss_pred eeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC
Q 037063 380 GIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIP 459 (588)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~ 459 (588)
... .+...+ .. +.|. .+.. ..+..++..+...|++++.++...+++++.+.|.++ +
T Consensus 345 ~~~---~~~~~~------~~-~~~r-~~~~----l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---------~ 400 (481)
T 4e1o_A 345 GVA---TDFMHW------QI-PLSR-RFRS----VKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRND---------P 400 (481)
T ss_dssp TTS---CCGGGG------SS-SSCC-CCTH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---------T
T ss_pred CCC---CCcccc------cc-cCCC-CccH----HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC---------C
Confidence 000 000000 01 2222 2222 455677777777788999999999999999999984 7
Q ss_pred eEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCc-EeccccccCcccccchHHHHHHHHhhhcCCCCCcCC
Q 037063 460 LVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNI-SLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSG 538 (588)
Q Consensus 460 ~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI-~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g 538 (588)
+++++.+ ...+++.|.+.+.+ .....+.+.+.+.|+ .+..+.. .|
T Consensus 401 g~~~~~~----~~~~~v~f~~~~~~---~~~~~l~~~L~~~g~~~~~~~~~---------------------------~g 446 (481)
T 4e1o_A 401 SFEIPAK----RHLGLVVFRLKGPN---SLTENVLKEIAKAGRLFLIPATI---------------------------QD 446 (481)
T ss_dssp TEECCSC----CCSSEEEEEESSCH---HHHHHHHHHHHHHCSSBCEEEEE---------------------------TT
T ss_pred CeEEecC----CceeEEEEEeCCch---HHHHHHHHHHHhCCeEEEEeeEE---------------------------CC
Confidence 8888765 34689999986421 123445555555564 3332210 33
Q ss_pred ccEEEEecC-CCCCHHHHHHHHHHHHHhhhh
Q 037063 539 VSVVTAALG-CLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 539 ~~~vRvSlg-~~~t~eDv~~li~~l~~~l~~ 568 (588)
...+|+++. +.+|.+||+++++.|++++++
T Consensus 447 ~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~ 477 (481)
T 4e1o_A 447 KLIIRFTVTSQFTTRDDILRDWNLIRDAATL 477 (481)
T ss_dssp EEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 448999976 556999999999999998764
No 104
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.92 E-value=3.7e-23 Score=219.20 Aligned_cols=305 Identities=10% Similarity=0.046 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcC-CCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVY-DHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~-e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
++.+.+.+.+.+.+|.+.+...|++|+|+|+|+.+++.++ .++||+|++.. .|++ . ...++..|++++.++.+
T Consensus 70 ~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l-~~~gd~vl~~~p~~~~-~----~~~~~~~g~~~~~~~~~ 143 (399)
T 1c7n_A 70 EYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREF-TKPGDGVIIITPVYYP-F----FMAIKNQERKIIECELL 143 (399)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHH-CCTTCEEEECSSCCTH-H----HHHHHTTTCEEEECCCE
T ss_pred HHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCCcHh-H----HHHHHHcCCEEEecccc
Confidence 3334444444444573322335999999999999999999 78999977654 4443 2 34456789999999885
Q ss_pred CCC--CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCCC----CC
Q 037063 258 WPN--LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGSK----DM 327 (588)
Q Consensus 258 ~~~--~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~~----d~ 327 (588)
+++ ..+|+++|++++++ +++++|++++++|+||..+| +++| ++|+++|+++|+|+++.... ..
T Consensus 144 ~~~g~~~~d~~~l~~~l~~-------~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~ 216 (399)
T 1c7n_A 144 EKDGYYTIDFQKLEKLSKD-------KNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEH 216 (399)
T ss_dssp EETTEEECCHHHHHHHHTC-------TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCC
T ss_pred cCCCCEEEcHHHHHHHhcc-------CCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCc
Confidence 332 35899999999972 46899999999999999999 7778 99999999999999976521 01
Q ss_pred CCC-CCCC--CCCcEEEeccCccCCCCCCceEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCC
Q 037063 328 DTL-GLSL--FKPDFLICSFYKIFGENPSGFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP 403 (588)
Q Consensus 328 ~~l-~l~~--~~~D~vv~S~~K~~G~~P~G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G 403 (588)
.++ .+.. ...++++.|++|.+|.+..++|++++++ ++++.+...... + ..+
T Consensus 217 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~------------------------~-~~~ 271 (399)
T 1c7n_A 217 TVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDA------------------------T-SGM 271 (399)
T ss_dssp CCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHH------------------------T-TCC
T ss_pred ccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhh------------------------c-ccC
Confidence 111 1111 2357899999999883222379999975 466655432211 0 111
Q ss_pred CCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHc-ccCCCCCCCCCeEEEeCCCCCCCcccEEE-EEee
Q 037063 404 ESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMN-LHHPHSETGIPLVRIYGPKVMFDRGPSLA-FNVF 481 (588)
Q Consensus 404 T~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~-L~h~~~~~g~~~v~i~~p~~~~~rg~iv~-f~~~ 481 (588)
+.+.... +++.++|+...+ .++++.++.+.+++++.+.|.+ + |+++++.+ .++++. +.+.
T Consensus 272 ~~~~~~~---~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~---------~~~~~~~~-----~~~~~~~~~~~ 333 (399)
T 1c7n_A 272 PFTTLGY---KACEICYKECGK-WLDGCIKVIDKNQRIVKDFFEVNH---------PEIKAPLI-----EGTYLQWIDFR 333 (399)
T ss_dssp CCCHHHH---HHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHHC---------TTSBCCCC-----SBSSEEEEECG
T ss_pred CCCHHHH---HHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHHHhhC---------CCCeEecC-----CceEEEEEEcc
Confidence 2232222 334455553222 2677888889999999999987 4 44554433 345444 5665
Q ss_pred cCCCCCcCHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 482 DWNGTRIDPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 482 ~~~g~~i~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
+. | ++...+.+.| +++||.+++|..|.+ .+.++||+|++.. .++++++++
T Consensus 334 ~~-~--~~~~~~~~~l~~~~gi~v~~g~~~~~------------------------~~~~~iRis~~~~--~~~l~~~l~ 384 (399)
T 1c7n_A 334 AL-K--MDHKAMEEFMIHKAQIFFDEGYIFGD------------------------GGIGFERINLAAP--SSVIQESLE 384 (399)
T ss_dssp GG-C--CCHHHHHHHHHHTTCCCCEEGGGGCG------------------------GGTTEEEEECCSC--HHHHHHHHH
T ss_pred cC-C--CCHHHHHHHHHHhCCEEEeCccccCC------------------------CCCCeEEEEeccC--HHHHHHHHH
Confidence 31 1 3466666666 478999998866531 1122899999864 799999999
Q ss_pred HHHHhhhh
Q 037063 561 FVSRFLDA 568 (588)
Q Consensus 561 ~l~~~l~~ 568 (588)
.|++++++
T Consensus 385 ~l~~~l~~ 392 (399)
T 1c7n_A 385 RLNKALKD 392 (399)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998765
No 105
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.92 E-value=2.3e-23 Score=218.37 Aligned_cols=288 Identities=11% Similarity=0.049 Sum_probs=200.2
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWPN 260 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~ 260 (588)
.++|+.+++++++++++ |+||+|+|+|+.+++.++ +||+|++ ...|++ . ...++..|++++.++.+..+
T Consensus 62 ~~l~~~la~~~~~~~~~--v~~~~g~~~al~~~~~~~---~gd~vl~~~p~y~~-~----~~~~~~~g~~~~~v~~~~~~ 131 (364)
T 1lc5_A 62 FHLHQALARHHQVPASW--ILAGNGETESIFTVASGL---KPRRAMIVTPGFAE-Y----GRALAQSGCEIRRWSLREAD 131 (364)
T ss_dssp HHHHHHHHHHHTSCGGG--EEEESSHHHHHHHHHHHH---CCSEEEEEESCCTH-H----HHHHHHTTCEEEEEECCGGG
T ss_pred HHHHHHHHHHHCcCHHH--EEECCCHHHHHHHHHHHc---CCCeEEEeCCCcHH-H----HHHHHHcCCeEEEEeCCccc
Confidence 58999999999997654 999999999999999987 5788664 445553 2 34456789999999986322
Q ss_pred CccC-HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCCC-C-CCCCC-C
Q 037063 261 LRIH-SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGSK-D-MDTLG-L 332 (588)
Q Consensus 261 ~~i~-~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~~-d-~~~l~-l 332 (588)
+ ++ .+++.+.+. +++++|++++++|+||.++| +++| ++|+++|+++|+|+++.... + ...+. +
T Consensus 132 ~-~~~l~~~~~~~~--------~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 202 (364)
T 1lc5_A 132 G-WQLTDAILEALT--------PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPAL 202 (364)
T ss_dssp T-TCCCTTHHHHCC--------TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGC
T ss_pred c-cchhHHHHHhcc--------CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHh
Confidence 2 33 355555554 57899999999999999999 7777 89999999999999976421 0 11122 1
Q ss_pred CCCCCcEEEeccCccCCCCCCceEEEE-EeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchh
Q 037063 333 SLFKPDFLICSFYKIFGENPSGFGCLF-VKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVS 411 (588)
Q Consensus 333 ~~~~~D~vv~S~~K~~G~~P~G~G~L~-v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~ 411 (588)
...+.|+++.|++|++|.+..++|+++ .++++++.+...... .+.+....
T Consensus 203 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~----------------------------~~~~~~~~- 253 (364)
T 1lc5_A 203 KDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMP----------------------------WSVNALAA- 253 (364)
T ss_dssp TTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSCT----------------------------TCSCHHHH-
T ss_pred ccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhCCC----------------------------CCCCHHHH-
Confidence 234578999999999984223479999 888877665432211 01222221
Q ss_pred hHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHH
Q 037063 412 SKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPA 491 (588)
Q Consensus 412 ~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~ 491 (588)
+++..+|+.- . .++++.++.+.+++++.+.|.++ |+++++. ..+.++.+.+.+. ..
T Consensus 254 --~~~~~~l~~~-~-~~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~-----~~g~~~~~~~~~~------~~ 309 (364)
T 1lc5_A 254 --LAGEVALQDS-A-WQQATWHWLREEGARFYQALCQL---------PLLTVYP-----GRANYLLLRCERE------DI 309 (364)
T ss_dssp --HHHHHGGGCH-H-HHHHHHHHHHHHHHHHHHHHHTS---------TTEEECC-----CSSSEEEEEESCT------TC
T ss_pred --HHHHHHHhCc-H-HHHHHHHHHHHHHHHHHHHHhcC---------CCCEECC-----CCCeEEEEECCCc------HH
Confidence 3333445431 1 26778888888999999999874 5677753 2467777766531 22
Q ss_pred HHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 492 LVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 492 ~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.+.+.|.++||.++.|..|.. .+.++||+|++ +.+|++++++.|+++++.
T Consensus 310 ~l~~~l~~~gi~v~~g~~~~~------------------------~~~~~iRis~~---~~~~~~~l~~~l~~~~~~ 359 (364)
T 1lc5_A 310 DLQRRLLTQRILIRSCANYPG------------------------LDSRYYRVAIR---SAAQNERLLAALRNVLTG 359 (364)
T ss_dssp CHHHHHHTTTEECEECTTSTT------------------------CCTTEEEEECC---CHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHCCcEEeeCcccCC------------------------CCCCEEEEEeC---CHHHHHHHHHHHHHHhhc
Confidence 355666678999998865521 11238999976 689999999999988654
No 106
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.92 E-value=9.8e-23 Score=215.27 Aligned_cols=324 Identities=9% Similarity=0.002 Sum_probs=208.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
...+++|+.|++++|++ +.|++++| |+|+++++.++.+++||+|+ ....|++ . ...++..|++++.++++
T Consensus 38 ~~~~~l~~~la~~~~~~---~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~~~~~~-~----~~~~~~~g~~~~~v~~~ 108 (388)
T 1b9h_A 38 DEVNSFEREFAAHHGAA---HALAVTNG-THALELALQVMGVGPGTEVIVPAFTFIS-S----SQAAQRLGAVTVPVDVD 108 (388)
T ss_dssp SHHHHHHHHHHHHTTCS---EEEEESCH-HHHHHHHHHHTTCCTTCEEEEESSSCTH-H----HHHHHHTTCEEEEECBC
T ss_pred HHHHHHHHHHHHHhCCC---eEEEeCCH-HHHHHHHHHHcCCCCcCEEEECCCccHH-H----HHHHHHcCCEEEEEecC
Confidence 34679999999999985 34666655 99999999998778999965 5566765 2 23456789999999998
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLFK 336 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~~ 336 (588)
..++.+|+++|+++|+ +++++|+ ++|+||.+.|+++| ++|+++|++||+|+++..+......++..++
T Consensus 109 ~~~~~~d~~~l~~~i~--------~~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~ 177 (388)
T 1b9h_A 109 AATYNLDPEAVAAAVT--------PRTKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELD 177 (388)
T ss_dssp TTTCCBCHHHHHHHCC--------TTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGGSS
T ss_pred CCcCCCCHHHHHHhcC--------cCceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCeeccccc
Confidence 4457899999999997 6788887 78899999999999 9999999999999998875211111122222
Q ss_pred -CcEEEeccCccCCCCCCceEEEEEeCc-c--hhcccCCCCCCCceEeeecCCCcccccccccccccc--cCCCCCccch
Q 037063 337 -PDFLICSFYKIFGENPSGFGCLFVKKS-S--ASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS--KFPESSISGV 410 (588)
Q Consensus 337 -~D~vv~S~~K~~G~~P~G~G~L~v~~~-~--~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~--e~GT~~~~~~ 410 (588)
+++..+|.||+++. + ..|+++.+++ + ++.+...... +... . + ..|+ ..|+......
T Consensus 178 ~i~~~S~s~~K~l~g-~-~~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~----------~-~~~~~~~~g~~~~~~~ 239 (388)
T 1b9h_A 178 SIATFSFQNGKLMTA-G-EGGAVVFPDGETEKYETAFLRHSC--GRPR---D----------D-RRYFHKIAGSNMRLNE 239 (388)
T ss_dssp SCEEEECCTTSSSCS-S-SCEEEEECTTCHHHHHHHHHHTBT--TCCT---T----------C-SSCCCCSCCCBCBCBH
T ss_pred ceEEEEccCCCcccC-C-CeEEEEECCHHHHHHHHHHHHHhC--CCCc---c----------C-ccceeecccccCCcCH
Confidence 44445555687762 4 4688888876 4 3444322211 1100 0 0 0110 2344321221
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCC--CCcccEEEEEeecCCCCCc
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVM--FDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~--~~rg~iv~f~~~~~~g~~i 488 (588)
...+++..++++ ++...++.+.+++++.+.|.++ ++++++++... ...+.++.|.+.+.. ..
T Consensus 240 ~~~a~~~~~~~~-----l~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 303 (388)
T 1b9h_A 240 FSASVLRAQLAR-----LDEQIAVRDERWTLLSRLLGAI---------DGVVPQGGDVRADRNSHYMAMFRIPGLT--EE 303 (388)
T ss_dssp HHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTS---------TTCEECCCCTTCCBCCCSEEEEECTTCC--HH
T ss_pred HHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccC---------CCccccCCCcCCCccceEEEEEEeCCcC--cc
Confidence 011222222222 4667777788899999999874 56777764321 123567888876411 01
Q ss_pred CHHHHHHHHHhCCcEeccccccCcccccchH---------------HHHHHHHhhhcCCCCCcCCccEEEEecCCCC-CH
Q 037063 489 DPALVQKLADRHNISLSCGFLQNIFFSGEYE---------------QERVRVLETRSGTNETRSGVSVVTAALGCLT-NF 552 (588)
Q Consensus 489 ~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~-t~ 552 (588)
+...+.+.|.++||.++.+...... ...+. -.....+.. ..||++++..+ |.
T Consensus 304 ~~~~l~~~L~~~gI~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~l~~~~~~~t~ 371 (388)
T 1b9h_A 304 RRNALVDRLVEAGLPAFAAFRAIYR-TDAFWELGAPDESVDAIARRCPNTDAISS-----------DCVWLHHRVLLAGE 371 (388)
T ss_dssp HHHHHHHHHHHTTCCEEECCCCGGG-SHHHHHSSCCSSCHHHHHHTCHHHHHHHH-----------HEEEEEGGGGGSCH
T ss_pred cHHHHHHHHHHCCCCcccccCcccc-ChHhHhcCCCcccccccccCCHHHHHHHh-----------CeEEecCCCCCCCH
Confidence 3566777777899999876431100 00000 000111111 28999999999 99
Q ss_pred HHHHHHHHHHHHhhhh
Q 037063 553 EDTYRLWAFVSRFLDA 568 (588)
Q Consensus 553 eDv~~li~~l~~~l~~ 568 (588)
|||+++++.|+++++.
T Consensus 372 edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 372 PELHATAEIIADAVAR 387 (388)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998753
No 107
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.92 E-value=2.6e-23 Score=221.80 Aligned_cols=300 Identities=13% Similarity=0.057 Sum_probs=202.9
Q ss_pred HHHHHHHHHHh----CCCCCC-ceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 182 SKIRKRIMDFM----NISEDD-YTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 182 ~~~r~~ia~~l----ga~~~e-~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++|+.|++++ |++.+. ..|++|+|+|+|+.+++.++ +++||+|++ ...|++ . ...++..|++++.++
T Consensus 78 ~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~-~~~gd~Vl~~~p~~~~-~----~~~~~~~g~~~~~~~ 151 (412)
T 2x5d_A 78 PRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLAT-LDHGDTILVPNPSYPI-H----IYGAVIAGAQVRSVP 151 (412)
T ss_dssp HHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHH-CCTTCEEEEEESCCHH-H----HHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchh-H----HHHHHHcCCEEEEee
Confidence 36677777776 853221 24999999999999999998 889999664 445553 2 234456799999999
Q ss_pred ccCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCH---HHH-HHHHHcCcEEEEeCCCcCCC----C
Q 037063 256 FAWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSY---MWM-SVAAEKGWHVLLDATALGSK----D 326 (588)
Q Consensus 256 ~~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl---~~I-~~a~~~g~~vvvDaa~~~~~----d 326 (588)
.+.. ...+|+++|+++++ +++++|++++++|+||..+|. ++| ++|+++|+++|+|+++.... .
T Consensus 152 ~~~~~~~~~d~~~l~~~i~--------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~ 223 (412)
T 2x5d_A 152 LVPGIDFFNELERAIRESI--------PKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWK 223 (412)
T ss_dssp CSTTSCHHHHHHHHHHTEE--------SCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC
T ss_pred cCCccCCCCCHHHHHHhcc--------cCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Confidence 8733 23378888988887 678999999999999999996 456 88999999999999976531 0
Q ss_pred CCC-CCCCC-CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 327 MDT-LGLSL-FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 327 ~~~-l~l~~-~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
..+ ..+.. .+.|+++.|++|++|.+..++|++++++++++.+...... ...+
T Consensus 224 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~--------------------------~~~~ 277 (412)
T 2x5d_A 224 APSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSY--------------------------HDYG 277 (412)
T ss_dssp CCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHHHHHHHH--------------------------HCCC
T ss_pred CCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHHHHHHhh--------------------------hccC
Confidence 001 11211 3478999999999983233489999988887766432210 0112
Q ss_pred CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCC
Q 037063 405 SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWN 484 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~ 484 (588)
.+.... +++..+|+...+ .++.+.++.+.+++++.+.|.++ | ++++.+ ..+.++.+.+..
T Consensus 278 ~~~~~~---~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-------g---~~~~~~----~~g~~~~~~~~~-- 337 (412)
T 2x5d_A 278 TFTPLQ---VAAIAALEGDQQ-CVRDIARQYQQRRDVLVKGLREA-------G---WMVENP----KASMYVWAKIPE-- 337 (412)
T ss_dssp CCHHHH---HHHHHHHHSCSH-HHHHHHHHHHHHHHHHHHHHHHH-------T---CCCCCC----SBSSEEEEECCT--
T ss_pred CCHHHH---HHHHHHHhCCHH-HHHHHHHHHHHHHHHHHHHHHHC-------C---CEecCC----CeeeEEEEEcCC--
Confidence 222221 333344543211 26778888889999999999875 2 333332 123355566642
Q ss_pred CCCc---CHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 485 GTRI---DPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 485 g~~i---~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
+ + +...+.+.| +++||.+++|..|.. .+.++||+|++. +.++++++++
T Consensus 338 ~--~~~~~~~~~~~~l~~~~gi~v~~g~~f~~------------------------~~~~~iRis~~~--~~~~l~~~l~ 389 (412)
T 2x5d_A 338 P--YAHLGSLEFAKKLLQDAKVSVSPGIGFGD------------------------YGDDHVRFALIE--NRDRLRQAVR 389 (412)
T ss_dssp T--TGGGCHHHHHHHHHHHHCEECEEGGGGCG------------------------GGTTEEEEECCS--CHHHHHHHHH
T ss_pred c--cCCCCHHHHHHHHHHHCCEEEeCchhhCC------------------------CCCCeEEEEecC--CHHHHHHHHH
Confidence 1 2 455565554 668999998866521 112389999986 8999999999
Q ss_pred HHHHhhhhh
Q 037063 561 FVSRFLDAD 569 (588)
Q Consensus 561 ~l~~~l~~~ 569 (588)
.|++++++.
T Consensus 390 ~l~~~l~~~ 398 (412)
T 2x5d_A 390 GIKAMFRAD 398 (412)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999988764
No 108
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.92 E-value=1.1e-23 Score=224.56 Aligned_cols=314 Identities=12% Similarity=0.073 Sum_probs=199.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
...+++|++|++++|++ +.|+|++| ++|+.+++. + +++||+|++ ...|++ .+..+...++..|++++.++.+
T Consensus 67 p~~~~l~~~la~~~g~~---~~i~~~sG-~~ai~~~~~-l-~~~gd~Vl~~~~~y~~-~~~~~~~~~~~~G~~v~~v~~~ 139 (403)
T 3cog_A 67 PTRNCLEKAVAALDGAK---YCLAFASG-LAATVTITH-L-LKAGDQIICMDDVYGG-TNRYFRQVASEFGLKISFVDCS 139 (403)
T ss_dssp HHHHHHHHHHHHHHTCS---EEEEESCH-HHHHHHHHT-T-SCTTCEEEEESSCCHH-HHHHHHHTGGGGTCEEEEECTT
T ss_pred chHHHHHHHHHHHhCCC---cEEEECCH-HHHHHHHHH-H-hCCCCEEEEeCCCcch-HHHHHHHHHHHcCCEEEEECCC
Confidence 44679999999999985 34666655 699999998 7 899999664 555654 3433345567789999999874
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcC-cEEEEeCCCcCCCCCCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKG-WHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g-~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
|.++|+++|+ +++++|++++++|+||.++|+++| ++|+++| +++++|+++..+....+++ .
T Consensus 140 ------d~~~l~~~i~--------~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~~---~ 202 (403)
T 3cog_A 140 ------KIKLLEAAIT--------PETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLA---L 202 (403)
T ss_dssp ------SHHHHHHHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTTT---T
T ss_pred ------CHHHHHHhcC--------cCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCCccc---c
Confidence 7889999887 689999999999999999999999 9999999 9999999988763223443 3
Q ss_pred CCcEEEeccCccCCCCCCc--eEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 336 KPDFLICSFYKIFGENPSG--FGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
++|+++.|++|++|. |.| +|+++++ +++++.+.+...++ | ++.+....
T Consensus 203 ~~div~~S~sK~~~g-~~~~~~G~v~~~~~~l~~~l~~~~~~~-g-------------------------~~~~~~~~-- 253 (403)
T 3cog_A 203 GADISMYSATKYMNG-HSDVVMGLVSVNCESLHNRLRFLQNSL-G-------------------------AVPSPIDC-- 253 (403)
T ss_dssp TCSEEEEETTTTTTC-SSCCCCEEEEECCHHHHHHHHHHHHHH-C-------------------------CCCCHHHH--
T ss_pred CCeEEEEcChhhccC-CCCCeEEEEEECcHHHHHHHHHHHHhc-C-------------------------CCCCHHHH--
Confidence 489999999998874 665 5999996 46666554332110 1 11111111
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH--HHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCH
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANA--LMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDP 490 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~--L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~ 490 (588)
.++..+++.+... +++..+....+++++.+. +.+..++.-+ ..|+++++.+.. ...+++++|.+.+ ..
T Consensus 254 -~~~~~~l~~l~~r-~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~-~~p~~~~~~~~~-~~~g~~~~~~l~~------~~ 323 (403)
T 3cog_A 254 -YLCNRGLKTLHVR-MEKHFKNGMAVAQFLESNPWVEKVIYPGLP-SHPQHELVKRQC-TGCTGMVTFYIKG------TL 323 (403)
T ss_dssp -HHHHHHHTTHHHH-HHHHHHHHHHHHHHHHTCTTEEEEECTTST-TSTTHHHHHHHC-SCCCSEEEEEESS------CH
T ss_pred -HHHHhhhhHHHHH-HHHHHHHHHHHHHHHhcCCCEEEEECCCCC-CCCcHHHHHhcC-CCCceEEEEEecC------CH
Confidence 2223445433221 233333333444444321 0000011000 012233332211 1348899998754 13
Q ss_pred HHHHHHHHhCCcEecc---cc------ccCccc-ccchHHHHHHHHhhhcCCCCCcCC--ccEEEEecCCCCCHHHHHHH
Q 037063 491 ALVQKLADRHNISLSC---GF------LQNIFF-SGEYEQERVRVLETRSGTNETRSG--VSVVTAALGCLTNFEDTYRL 558 (588)
Q Consensus 491 ~~v~~~l~~~gI~v~~---G~------~c~~~~-~~~~~~~~~~~l~~~~~~~~~~~g--~~~vRvSlg~~~t~eDv~~l 558 (588)
+.+.+++++.||.++. |. +|.... +.... ..... .| .+.||+|+|..++.++|++|
T Consensus 324 ~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~----~~~~~--------~g~~~~~iRlSvg~e~~~d~i~~l 391 (403)
T 3cog_A 324 QHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLK----NDRDV--------LGISDTLIRLSVGLEDEEDLLEDL 391 (403)
T ss_dssp HHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCH----HHHHH--------HTCCTTEEEEECCSSCHHHHHHHH
T ss_pred HHHHHHHHhCCcceEccCCCCcceeeecccccccccCCH----HHHHh--------cCCCcCeEEEEeCCCCHHHHHHHH
Confidence 5678888999996542 42 332211 00000 00111 12 23999999999999999999
Q ss_pred HHHHHHhhh
Q 037063 559 WAFVSRFLD 567 (588)
Q Consensus 559 i~~l~~~l~ 567 (588)
.++|++.++
T Consensus 392 ~~al~~~~~ 400 (403)
T 3cog_A 392 DQALKAAHP 400 (403)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHhhc
Confidence 999987665
No 109
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.91 E-value=2.8e-23 Score=222.34 Aligned_cols=305 Identities=10% Similarity=0.105 Sum_probs=212.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++.+++++.+++.++.+.+...|+||+|+++|+.+++.++ .++||+|++ ...|++ . ...++..|.+++.+|+
T Consensus 99 ~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~-~~~gd~Vi~~~~~y~~-~----~~~~~~~g~~~~~~~~ 172 (421)
T 3l8a_A 99 DDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAF-SEKGDAVLINSPVYYP-F----ARTIRLNDHRLVENSL 172 (421)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHH-SCTEEEEEEEESCCHH-H----HHHHHHTTEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHh-cCCCCEEEECCCCcHH-H----HHHHHHCCCEEEeccc
Confidence 57788999999999994333345999999999999999998 889999664 445553 2 3445678999999998
Q ss_pred cC--CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCC------
Q 037063 257 AW--PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGS------ 324 (588)
Q Consensus 257 ~~--~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~------ 324 (588)
++ .+..+|+++|+++|++ +++++|++++++|++|..+| +++| ++|+++|+++|+|+++..-
T Consensus 173 ~~~~~~~~~d~~~le~~i~~-------~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~ 245 (421)
T 3l8a_A 173 QIINGRFEIDFEQLEKDIID-------NNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNT 245 (421)
T ss_dssp EEETTEEECCHHHHHHHHHH-------TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC
T ss_pred cccCCCeeeCHHHHHHHhhc-------cCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC
Confidence 63 3346899999999972 57999999999999999965 4556 8899999999999997541
Q ss_pred -CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccC
Q 037063 325 -KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKF 402 (588)
Q Consensus 325 -~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~ 402 (588)
..+..++.+....++++.|++|.+|.++.++|+++++ +++.+.+.+.... + ..
T Consensus 246 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~------------------------~-~~ 300 (421)
T 3l8a_A 246 HHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLA------------------------N-NQ 300 (421)
T ss_dssp CCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHH------------------------T-TC
T ss_pred CccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHh------------------------c-cc
Confidence 1112222111235689999999888323456999998 5665555432110 0 11
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE-EEee
Q 037063 403 PESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA-FNVF 481 (588)
Q Consensus 403 GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~-f~~~ 481 (588)
++.+..+. +++.++++...+. ++++.++.+.+++++.+.|.++ |+++++.+ .+..+. +.+.
T Consensus 301 ~~~n~~~~---~a~~aal~~~~~~-~~~~~~~~~~~~~~l~~~L~~~---------~~i~~~~~-----~~~~~~~v~~~ 362 (421)
T 3l8a_A 301 HEVPTVGM---IATQAAFQYGKPW-LEELKTVIEGNIKLVIKELEAK---------TKIKVMEP-----EGTYLVWLDFS 362 (421)
T ss_dssp SCCCHHHH---HHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHH---------CSCEEECC-----SBSSEEEEECG
T ss_pred CCCCHHHH---HHHHHHHhccHHH-HHHHHHHHHHHHHHHHHHHHhC---------CCceEeCC-----CeeEEEEEecc
Confidence 23343332 4455666643332 6888889999999999999884 45777654 344444 5554
Q ss_pred cCCCCCcCHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 482 DWNGTRIDPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 482 ~~~g~~i~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
.. | ++...+.+.| +++||.++.|..|.. .+..+||++++ ++.+||+++++
T Consensus 363 ~~-~--~~~~~l~~~l~~~~gi~v~~g~~f~~------------------------~~~~~iRi~~~--~~~~~i~~~l~ 413 (421)
T 3l8a_A 363 AY-A--IAQPQLSEKLQNEAKVVLNDGAHFGK------------------------EGKYFARLNVA--TPKNTVQEALS 413 (421)
T ss_dssp GG-T--CCTTHHHHHHHHTTCEECEEGGGGCG------------------------GGTTEEEEECC--SCHHHHHHHHH
T ss_pred cc-C--CCHHHHHHHHHHhCCEEEECchhhCC------------------------CCCCEEEEEec--CCHHHHHHHHH
Confidence 31 1 2344555544 678999999866531 12239999988 68999999999
Q ss_pred HHHHhhh
Q 037063 561 FVSRFLD 567 (588)
Q Consensus 561 ~l~~~l~ 567 (588)
.|+++++
T Consensus 414 ~l~~~l~ 420 (421)
T 3l8a_A 414 RIISVFG 420 (421)
T ss_dssp HHHHHC-
T ss_pred HHHHHHh
Confidence 9998765
No 110
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.91 E-value=1.1e-22 Score=214.97 Aligned_cols=297 Identities=16% Similarity=0.122 Sum_probs=196.9
Q ss_pred HHHHHHHHHh----CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 183 KIRKRIMDFM----NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
++|+.|++++ |.+.+...|+||+|+|+|+++++.++ +++||+|++. ..|++ . ...++..|++++.++++
T Consensus 72 ~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l-~~~gd~vl~~~p~~~~-~----~~~~~~~g~~~~~v~~~ 145 (391)
T 3h14_A 72 ALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTAL-FDSGDRVGIGAPGYPS-Y----RQILRALGLVPVDLPTA 145 (391)
T ss_dssp HHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCHH-H----HHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCCcc-H----HHHHHHcCCEEEEeecC
Confidence 5555555555 53323335999999999999999999 8999997654 44442 2 34567789999999987
Q ss_pred CC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCCC-CCCCCC
Q 037063 258 WP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGSK-DMDTLG 331 (588)
Q Consensus 258 ~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~~-d~~~l~ 331 (588)
.. +..+|+++|+++ ++++|++++++|+||..+| +++| ++|+++|+++|+|+++.... +-....
T Consensus 146 ~~~~~~~d~~~l~~~-----------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~ 214 (391)
T 3h14_A 146 PENRLQPVPADFAGL-----------DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVT 214 (391)
T ss_dssp GGGTTSCCHHHHTTS-----------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCC
T ss_pred cccCCCCCHHHHHhc-----------CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcC
Confidence 32 235687776532 5889999999999999999 5566 88999999999999976421 001111
Q ss_pred CC-CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 332 LS-LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 332 l~-~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
+. ....++++.|++|.+|.++.++|++++++++++.+...... ..++.+....
T Consensus 215 ~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~ 268 (391)
T 3h14_A 215 ALELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVERIAQN--------------------------MFICAPHASQ 268 (391)
T ss_dssp GGGTCSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHHHHHH--------------------------TTCCCCHHHH
T ss_pred hhhcCCCEEEEEechhccCCccceeEEEEeCHHHHHHHHHHHhh--------------------------hccCCCHHHH
Confidence 11 12356888999999984355689999988877665432211 1112232221
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCH
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDP 490 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~ 490 (588)
+++.++|+. ...++++.++.+.+++++.+.|.++ +...++.| ..+.++.+.+.... .+.
T Consensus 269 ---~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~---------~~~~~~~~----~~~~~~~~~~~~~~---~~~ 327 (391)
T 3h14_A 269 ---VAALAALDC--DAELQANLDVYKANRKLMLERLPKA---------GFTRIAPP----DGAFYVYADVSDLT---DDS 327 (391)
T ss_dssp ---HHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHHHHH---------TCCCBCCC----CBTTEEEEECTTTC---SCH
T ss_pred ---HHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHHHc---------CCCcccCC----CeeEEEEEecCccC---CCH
Confidence 333345541 1236778888899999999999885 11222222 12234444554311 456
Q ss_pred HHHHH-HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 491 ALVQK-LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 491 ~~v~~-~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
..+.+ +++++||.+++|..|... .+.++||+|++. +.||++++++.|++++++
T Consensus 328 ~~~~~~l~~~~gi~v~~g~~~~~~-----------------------~~~~~iRis~~~--~~~~i~~~l~~l~~~~~~ 381 (391)
T 3h14_A 328 RAFAAEILEKAGVAVTPGLDFDPE-----------------------RGAGTLRFSYAR--ATADIEEGLDRLEAFMQA 381 (391)
T ss_dssp HHHHHHHHHHHCEECEEGGGTCTT-----------------------TGGGEEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEcCchhhCCC-----------------------CCCCeEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 66654 456679999999777320 112399999987 789999999999987764
No 111
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.91 E-value=1e-22 Score=215.68 Aligned_cols=299 Identities=10% Similarity=0.047 Sum_probs=201.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCC-CeEEEcC-CCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSN-PRLLTVY-DHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~g-d~ll~~~-e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++.+.+.+.+.+.+|.+.+...|+||+|+|+|+.+++.++ +++| |+|++.. .|+. . ...++..|++++.++
T Consensus 79 ~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l-~~~g~d~vl~~~p~~~~-~----~~~~~~~g~~~~~v~ 152 (398)
T 3ele_A 79 VETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRAL-TSDAYDEFITIAPYFPE-Y----KVFVNAAGARLVEVP 152 (398)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHH-CCSTTCEEEEESSCCTH-H----HHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHH-cCCCCCEEEEeCCCchh-h----HHHHHHcCCEEEEEe
Confidence 34555555555555664333345999999999999999999 8999 9976544 4442 2 345577899999999
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHH------cCcEEEEeCCCcCCC
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAE------KGWHVLLDATALGSK 325 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~------~g~~vvvDaa~~~~~ 325 (588)
++..++.+|+++|+++++ +++++|++++++|+||..+|.++ | ++|++ +|+++|+|+++....
T Consensus 153 ~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~ 224 (398)
T 3ele_A 153 ADTEHFQIDFDALEERIN--------AHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIV 224 (398)
T ss_dssp CCTTTSSCCHHHHHHTCC--------TTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCB
T ss_pred cCCcCCcCCHHHHHHHhC--------cCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccc
Confidence 975566899999999987 68999999999999999999554 5 77888 899999999976421
Q ss_pred -C--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcc--cCCCCCCCceEeeecCCCcccccccccccccc
Q 037063 326 -D--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVL--SGSTSSVSTIMGIEPSFSEIIELETLDESSQS 400 (588)
Q Consensus 326 -d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l--~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~ 400 (588)
+ ..+........++++.|++|.+|.++.++|++++++++++.. ...... .. .
T Consensus 225 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~----------------~~-----~-- 281 (398)
T 3ele_A 225 YDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCG----------------AG-----R-- 281 (398)
T ss_dssp CTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHH----------------HH-----H--
T ss_pred cCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHH----------------Hh-----h--
Confidence 0 111112233467999999999984355699999998865421 100000 00 0
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE-EEEE
Q 037063 401 KFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS-LAFN 479 (588)
Q Consensus 401 e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i-v~f~ 479 (588)
..++.+.... +...+...++.. ...++.+..++++.+.|.++ +++++.| .+++ +.+.
T Consensus 282 ~~~~~~~~~~----~~~a~~~~l~~~---~~~~~~~~~~~~l~~~L~~~----------g~~~~~~-----~~~~~~~~~ 339 (398)
T 3ele_A 282 ALGYVCAPSL----FQKMIVKCQGAT---GDINAYKENRDLLYEGLTRI----------GYHCFKP-----DGAFYMFVK 339 (398)
T ss_dssp HTTCCCSCHH----HHHHHTTCTTCC---CCHHHHHHHHHHHHHHHHHH----------TCCEECC-----SBSSEEEEE
T ss_pred hccccCCCHH----HHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHc----------CCeecCC-----CeeEEEEEE
Confidence 0111111111 111222222221 13566677788888888875 2344443 2344 5555
Q ss_pred eecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHH
Q 037063 480 VFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLW 559 (588)
Q Consensus 480 ~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li 559 (588)
+.+ .+...+.+.|.++||.+++|..|. ..++||+|++ ++.|||++++
T Consensus 340 ~~~-----~~~~~~~~~l~~~gi~v~~g~~~~--------------------------~~~~iRis~~--~~~e~i~~~l 386 (398)
T 3ele_A 340 ALE-----DDSNAFCEKAKEEDVLIVAADGFG--------------------------CPGWVRISYC--VDREMIKHSM 386 (398)
T ss_dssp CSS-----SCHHHHHHHHHTTTEECEESGGGT--------------------------CTTEEEEECC--SCHHHHHHHH
T ss_pred cCC-----CCHHHHHHHHHHCCEEEeCccccC--------------------------CCCeEEEEec--CCHHHHHHHH
Confidence 543 346778888889999999986652 1128999997 6999999999
Q ss_pred HHHHHhhhh
Q 037063 560 AFVSRFLDA 568 (588)
Q Consensus 560 ~~l~~~l~~ 568 (588)
+.|++++++
T Consensus 387 ~~l~~~l~~ 395 (398)
T 3ele_A 387 PAFEKIYKK 395 (398)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998764
No 112
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.91 E-value=5.5e-23 Score=216.01 Aligned_cols=295 Identities=15% Similarity=0.119 Sum_probs=208.4
Q ss_pred HHHHHHHHHHh-CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEeccCC
Q 037063 182 SKIRKRIMDFM-NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEFAWP 259 (588)
Q Consensus 182 ~~~r~~ia~~l-ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~ 259 (588)
.++|+.+++++ ++++++ |++|+|+|+|+.+++.++ +++||+|++. ..|++ . ...++..|++++.++++++
T Consensus 66 ~~l~~~la~~~~~~~~~~--v~~~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~~~~-~----~~~~~~~g~~~~~v~~~~~ 137 (375)
T 3op7_A 66 PAFKKSVSQLYTGVKPEQ--ILQTNGATGANLLVLYSL-IEPGDHVISLYPTYQQ-L----YDIPKSLGAEVDLWQIEEE 137 (375)
T ss_dssp HHHHHHHHTTSSSCCGGG--EEEESHHHHHHHHHHHHH-CCTTCEEEEEESSCTH-H----HHHHHHTTCEEEEEEEEGG
T ss_pred HHHHHHHHHHhccCChhh--EEEcCChHHHHHHHHHHh-cCCCCEEEEeCCCchh-H----HHHHHHcCCEEEEEecccc
Confidence 48899999988 466554 999999999999999999 8999997654 44543 2 3445678999999998733
Q ss_pred -CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCCCCCCCCC--C
Q 037063 260 -NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGSKDMDTLG--L 332 (588)
Q Consensus 260 -~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~--l 332 (588)
+..+|+++|+++++ +++++|++++++|+||..+| +++| ++|+++|+++|+|+++.... ...+. .
T Consensus 138 ~~~~~d~~~l~~~l~--------~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~-~~~~~~~~ 208 (375)
T 3op7_A 138 NGWLPDLEKLRQLIR--------PTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFS-ELDVPSII 208 (375)
T ss_dssp GTTEECHHHHHHHCC--------TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCS-SSCCCCHH
T ss_pred CCCCCCHHHHHHhhc--------cCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc-ccCCCchh
Confidence 34589999999997 68999999999999999999 8888 99999999999999965521 01110 1
Q ss_pred CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 333 SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 333 ~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
+....++++.|++|.+|.+..++|++++++++++.+......+ ..+.+....
T Consensus 209 ~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~--------------------------~~~~~~~~~-- 260 (375)
T 3op7_A 209 EVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYT--------------------------MICAGVFDD-- 260 (375)
T ss_dssp HHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGT--------------------------TSCCCHHHH--
T ss_pred hhcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhh--------------------------ccCCCcHHH--
Confidence 1233678999999999842344799999888877776443210 001111111
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHH
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPAL 492 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~ 492 (588)
++...+++..+.. +++..++.+.+++++.+.|.++ +++.++.|. .+..+.+.+... .+...
T Consensus 261 -~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~---------~~~~~~~~~----~~~~~~~~~~~~----~~~~~ 321 (375)
T 3op7_A 261 -LVAQLALAHYQEI-LERNRHILEENLAILDQWIEEE---------PLVSYIRPA----VVSTSFVKIAVD----MPMED 321 (375)
T ss_dssp -HHHHHHHHTHHHH-HHHHHHHHHHHHHHHHHHHHHC---------TTEEECCCS----SSSCEEEEECCS----SCHHH
T ss_pred -HHHHHHHhccHHH-HHHHHHHHHHHHHHHHHHHhhC---------CCceEecCC----CeEEEeEEcCCC----CCHHH
Confidence 3334556554443 5677777788888999988873 567766542 223333334321 34555
Q ss_pred H-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 493 V-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 493 v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+ .+++.++||.+++|..+. ....+|++++. +.|||+++++.|.+++++
T Consensus 322 ~~~~ll~~~gi~v~~g~~~~--------------------------~~~~iRi~~~~--~~~~i~~~l~~l~~~l~~ 370 (375)
T 3op7_A 322 FCLQLLQEHGVLLVPGNRFE--------------------------RDGYVRLGFAC--EQETLIKGLEKLSQFLRR 370 (375)
T ss_dssp HHHHHHHHHCEECEEGGGGT--------------------------CTTEEEECCCS--CHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHhCCEEEeChhhhC--------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 5 455588999999885441 11289999875 459999999999998875
No 113
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.91 E-value=5.2e-24 Score=230.11 Aligned_cols=285 Identities=13% Similarity=0.051 Sum_probs=205.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcC-CCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVY-DHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~-e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
..++++|+.+++ +|++ +.++||+|+|+|+.+++.++ +++||+|++.. .|++ ... .+...|++++.++..
T Consensus 57 ~~~~~~~~~la~-~g~~---~~v~~~~G~t~a~~~~~~a~-~~~gd~Vlv~~~~h~s-~~~----~~~~~G~~~~~v~~~ 126 (446)
T 2x3l_A 57 EVILKSMKQVEK-HSDY---DGYFLVNGTTSGILSVIQSF-SQKKGDILMARNVHKS-VLH----ALDISQQEGHFIETH 126 (446)
T ss_dssp SHHHHHHHHHCS-CTTE---EEEEESSHHHHHHHHHHHTT-TTSSSCEEECTTCCHH-HHH----HHHHHTCCEEECEEE
T ss_pred hHHHHHHHHHHh-cCCC---ceEEEeCCHHHHHHHHHHHh-cCCCCEEEEecCccHH-HHH----HHHHcCCeEEEEeCe
Confidence 456899999999 9986 35999999999999999999 89999977554 5554 332 234469999999883
Q ss_pred C-CC----CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCC--C
Q 037063 258 W-PN----LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMD--T 329 (588)
Q Consensus 258 ~-~~----~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~--~ 329 (588)
+ ++ +.++.++| +. +++++|++++ +|++|..+|+++| ++|+++|+++++|+++....... +
T Consensus 127 ~~~~~~~~~~~d~~~l---~~--------~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~ 194 (446)
T 2x3l_A 127 QSPLTNHYNKVNLSRL---NN--------DGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFP 194 (446)
T ss_dssp ECTTTSSEEEEEC------------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSC
T ss_pred eccccCcCCCCCHHHH---cC--------CCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCC
Confidence 2 33 56777777 44 6789999999 6669999999999 99999999999999976521000 2
Q ss_pred CCCCCCCCcEEEeccCc-cCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc
Q 037063 330 LGLSLFKPDFLICSFYK-IFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS 408 (588)
Q Consensus 330 l~l~~~~~D~vv~S~~K-~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~ 408 (588)
++.....+|+++.|+|| ++| +.|+|+++++++.++ +.+...+ + ..+ ..+++++.
T Consensus 195 ~~~~~~g~Di~~~S~~K~l~~--~~g~g~l~~~~~~i~-~~~~~~~--~-------------------~~~-~~~s~~~~ 249 (446)
T 2x3l_A 195 DSTLNYQADYVVQSFHKTLPA--LTMGSVLYIHKNAPY-RENIIEY--L-------------------SYF-QTSSPSYL 249 (446)
T ss_dssp CCGGGGTCSEEEECHHHHSSS--CTTCEEEEEETTCTT-HHHHHHH--H-------------------HHH-SCSSCCHH
T ss_pred CChHHcCCCEEEECCcccccc--ccccEEEEEcCCcCC-HHHHHHH--H-------------------HHH-cCCCchHH
Confidence 22223348999999999 555 789999999988654 2221111 0 022 45666665
Q ss_pred chhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCc
Q 037063 409 GVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i 488 (588)
.+ +++..+++++...|.+++.++.+.+++++++. . ++++++.+ +..+.+.+.+ +
T Consensus 250 ~~---aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~--g------------~~~~~~~~----~~~l~i~~~~-----~ 303 (446)
T 2x3l_A 250 IM---ASLESAAQFYKTYDSTLFFAKRAQLIECLENK--G------------FEMLQVDD----PLKLLIKYEG-----F 303 (446)
T ss_dssp HH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH--T------------CEEEECSS----TTEEEEECTT-----S
T ss_pred HH---HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc--C------------CEECcCCC----CeEEEEEeCC-----c
Confidence 54 67778889998888777889999999888876 3 34444421 2346666653 5
Q ss_pred CHHHHHHHHHhCCcEec-cccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 489 DPALVQKLADRHNISLS-CGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 489 ~~~~v~~~l~~~gI~v~-~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
+...+.+.|.++||.++ .| . ..||++++.++|.+|+ ++++.|+++++
T Consensus 304 ~~~~l~~~L~~~GI~v~~~g-----------------------------~--~~iRi~~~~~~t~e~i-~l~~aL~~~~~ 351 (446)
T 2x3l_A 304 TGHDIQNWFMNAHIYLELAD-----------------------------D--YQALAILPLWHHDDTY-LFDSLLRKIED 351 (446)
T ss_dssp CHHHHHHHHHHTTEEESEEC-----------------------------S--SCEEEECCCCCTTCCC-CHHHHHHHHHT
T ss_pred CHHHHHHHHHHCCCEEEecC-----------------------------C--CEEEEEeecCCCHHHH-HHHHHHHHHHH
Confidence 67778888877799987 33 1 2799999999999999 99999999875
Q ss_pred h
Q 037063 568 A 568 (588)
Q Consensus 568 ~ 568 (588)
.
T Consensus 352 ~ 352 (446)
T 2x3l_A 352 M 352 (446)
T ss_dssp C
T ss_pred h
Confidence 4
No 114
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.91 E-value=1.8e-22 Score=214.03 Aligned_cols=308 Identities=12% Similarity=0.051 Sum_probs=201.4
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+++|++|++++|++ .+++++|+++|+.+++.++ +++||+|+ ....|++ ....+...++..|++++.++.
T Consensus 58 ~~~~~~l~~~la~~~g~~----~~i~~~sG~~ai~~~~~~~-~~~gd~vl~~~~~y~~-~~~~~~~~~~~~g~~~~~v~~ 131 (389)
T 3acz_A 58 NPTVEQFEEMVCSIEGAA----GSAAFGSGMGAISSSTLAF-LQKGDHLIAGDTLYGC-TVSLFTHWLPRFGIEVDLIDT 131 (389)
T ss_dssp CHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHTTT-CCTTCEEEEESSCCHH-HHHHHHHHHHHTTCEEEEECT
T ss_pred ChHHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHH-hCCCCEEEEeCCCchH-HHHHHHHHHHHcCCEEEEECC
Confidence 456789999999999985 2677777889999999998 89999966 4556665 344335557788999999986
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
.|.++|+++|+ +++++|++++++|++|.+.|+++| ++|+++|+++++|+++..+....+++ +
T Consensus 132 ------~d~~~l~~~i~--------~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~---~ 194 (389)
T 3acz_A 132 ------SDVEKVKAAWK--------PNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKPLE---L 194 (389)
T ss_dssp ------TCHHHHHHTCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGG---T
T ss_pred ------CCHHHHHHhcC--------CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCccc---c
Confidence 37889998887 689999999999999999999999 99999999999999987763223343 3
Q ss_pred CCcEEEeccCccCCCCCCc--eEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhh
Q 037063 336 KPDFLICSFYKIFGENPSG--FGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSS 412 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G--~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~ 412 (588)
.+|+++.|++|++|. |.+ .|++++++ ++++.+.+.... ..++.+....
T Consensus 195 ~~di~~~S~sK~~~~-~~~~~~G~v~~~~~~~~~~l~~~~~~--------------------------~g~~~~~~~~-- 245 (389)
T 3acz_A 195 GADIALHSVSKYING-HGDVIGGVSSAKTAEDIATIKFYRKD--------------------------AGSLMAPMDA-- 245 (389)
T ss_dssp TCSEEEEETTTTTTC-SSCCCCEEEEESSHHHHHHHHHHHHH--------------------------HCCCCCHHHH--
T ss_pred CCeEEEECChhhccC-CCCceeEEEEECcHHHHHHHHHHHHh--------------------------cCCCCCHHHH--
Confidence 499999999998874 555 59999998 877766533210 0011111110
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHccc------CCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCC
Q 037063 413 KLVECKGLDHADALGLILISNRARYLINWLANALMNLH------HPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGT 486 (588)
Q Consensus 413 ~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~------h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~ 486 (588)
.+...+++.+ +...++....+..+.+.|.+++ ++.-+ ..|+++++.+.. ...+++++|.+.+
T Consensus 246 -~~~~~~l~~l-----~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~-~~~~~~~~~~~~-~g~g~~~~~~l~~---- 313 (389)
T 3acz_A 246 -FLCARGMKTL-----PIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLE-SFPGHDIAKKQM-TGYGSTFLFEMKS---- 313 (389)
T ss_dssp -HHHHHHHTTH-----HHHHHHHHHHHHHHHHHHHHCTTEEEEECTTST-TSTTHHHHHHHC-SSCCSEEEEEESS----
T ss_pred -HHHHcCccHH-----HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCC-CCccHHHHHhhC-CCCCeEEEEEECC----
Confidence 1222344322 3333444445555666665531 00000 011111111110 1247899998853
Q ss_pred CcCHHHHHHHHHhCCcEecc---c------cccCcccccchHHHHHHHHhhhcCCCCCcCC--ccEEEEecCCCCCHHHH
Q 037063 487 RIDPALVQKLADRHNISLSC---G------FLQNIFFSGEYEQERVRVLETRSGTNETRSG--VSVVTAALGCLTNFEDT 555 (588)
Q Consensus 487 ~i~~~~v~~~l~~~gI~v~~---G------~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g--~~~vRvSlg~~~t~eDv 555 (588)
.+.+.+++++.||.++. | ++|.......... ..... .| .+.||+|+|..++.++|
T Consensus 314 ---~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~---~~~~~--------~g~~~~~iRlsvg~~~~~~li 379 (389)
T 3acz_A 314 ---FEAAKKLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPE---NIMRK--------QGITPELVRISVGIENVDDII 379 (389)
T ss_dssp ---HHHHHHHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCH---HHHHH--------HTCCTTEEEEECCSSCHHHHH
T ss_pred ---HHHHHHHHHhCCCcEECcCCCCcccEeeCCcccccccCCH---HHHHh--------cCCCcCeEEEEeccCCHHHHH
Confidence 56678899999998776 5 5664322111000 11111 22 23999999998777777
Q ss_pred HHHHHHHH
Q 037063 556 YRLWAFVS 563 (588)
Q Consensus 556 ~~li~~l~ 563 (588)
+.+.++|+
T Consensus 380 ~~l~~al~ 387 (389)
T 3acz_A 380 ADLKQALE 387 (389)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 77666654
No 115
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.91 E-value=8.9e-23 Score=217.50 Aligned_cols=296 Identities=13% Similarity=0.077 Sum_probs=199.6
Q ss_pred HHHHHHHHHh----CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 183 KIRKRIMDFM----NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
++|+.+++++ |.+.+...|++|+|+|+|+.+++.++ +++||+|++ ...|++ . ...++..|++++.++.+
T Consensus 83 ~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~-~~~gd~Vl~~~~~~~~-~----~~~~~~~g~~~~~v~~~ 156 (409)
T 2gb3_A 83 ELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVI-ANPGDEILVLEPFYAN-Y----NAFAKIAGVKLIPVTRR 156 (409)
T ss_dssp HHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTH-H----HHHHHHHTCEEEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHh-CCCCCEEEEcCCCchh-H----HHHHHHcCCEEEEeccC
Confidence 5666666665 43222235999999999999999998 889999664 455653 2 23456679999999987
Q ss_pred C-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCCC-CCCCCC
Q 037063 258 W-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGSK-DMDTLG 331 (588)
Q Consensus 258 ~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~~-d~~~l~ 331 (588)
. .+..+ +++|+++++ +++++|++++++|+||.++| +++| ++|+++|+++|+|+++.... +-....
T Consensus 157 ~~~~~~~-~~~l~~~l~--------~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~ 227 (409)
T 2gb3_A 157 MEEGFAI-PQNLESFIN--------ERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFAS 227 (409)
T ss_dssp GGGTSCC-CTTGGGGCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCC
T ss_pred CCCCCcc-HHHHHHhhC--------cCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCC
Confidence 3 12334 788887776 57899999999999999987 5667 88999999999999976531 101111
Q ss_pred -CCC-CCCcEEEeccCccCCCCCCc--eEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 332 -LSL-FKPDFLICSFYKIFGENPSG--FGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 332 -l~~-~~~D~vv~S~~K~~G~~P~G--~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
+.. .+.|+++.|++|++| +.| +|++++++ ++++.+...... .. +.+
T Consensus 228 ~~~~~~~~~i~~~s~sK~~g--~~G~r~G~~~~~~~~l~~~l~~~~~~--------------------------~~-~~~ 278 (409)
T 2gb3_A 228 ALSIESDKVVVIDSVSKKFS--ACGARVGCLITRNEELISHAMKLAQG--------------------------RL-APP 278 (409)
T ss_dssp GGGSCCTTEEEEEESTTTTT--CGGGCCEEEECSCHHHHHHHHHHHHH--------------------------SC-CCC
T ss_pred ccccCCCCEEEEecchhccC--CccceEEEEEECcHHHHHHHHHHHhc--------------------------cC-CCC
Confidence 221 347999999999998 446 89999998 777665432211 00 122
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEE-eCCCCCCCcccEEEEEeecCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRI-YGPKVMFDRGPSLAFNVFDWNG 485 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i-~~p~~~~~rg~iv~f~~~~~~g 485 (588)
.... +++.++|+.... +++++.++.+.+++++.+.|.++ ++++ +.| ..+.++.+.+.+
T Consensus 279 ~~~~---~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~----~~~~~~~~~~~~--- 337 (409)
T 2gb3_A 279 LLEQ---IGSVGLLNLDDS-FFDFVRETYRERVETVLKKLEEH----------GLKRFTKP----SGAFYITAELPV--- 337 (409)
T ss_dssp HHHH---HHHHHHHTCCHH-HHHHHHHHHHHHHHHHHHHHHHT----------TCCCBCCC----SBSSEEEEECSS---
T ss_pred HHHH---HHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHHHHc----------CceeeeCC----CeeEEEEEEeCC---
Confidence 2111 333445532111 36778888899999999999874 2333 332 123333335542
Q ss_pred CCcCHHHHHHHHHhC------CcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHH
Q 037063 486 TRIDPALVQKLADRH------NISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLW 559 (588)
Q Consensus 486 ~~i~~~~v~~~l~~~------gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li 559 (588)
.+...+.+.|.++ ||.++.|..|... . ..+...||+|++ ++.|||++++
T Consensus 338 --~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~--------------~-------~~~~~~iRis~~--~~~e~i~~~~ 392 (409)
T 2gb3_A 338 --EDAEEFARWMLTDFNMDGETTMVAPLRGFYLT--------------P-------GLGKKEIRIACV--LEKDLLSRAI 392 (409)
T ss_dssp --SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSS--------------T-------TTTSSEEEEECC--SCHHHHHHHH
T ss_pred --CCHHHHHHHHHhccccccCcEEEeCchHhCCC--------------C-------CCCCCEEEEEeC--CCHHHHHHHH
Confidence 4566676666554 9999988654210 0 012238999988 8999999999
Q ss_pred HHHHHhhhh
Q 037063 560 AFVSRFLDA 568 (588)
Q Consensus 560 ~~l~~~l~~ 568 (588)
+.|++++++
T Consensus 393 ~~l~~~l~~ 401 (409)
T 2gb3_A 393 DVLMEGLKM 401 (409)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998865
No 116
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.91 E-value=2.4e-22 Score=214.84 Aligned_cols=336 Identities=12% Similarity=0.030 Sum_probs=217.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++.+++++.+++++|++ .++|++|+|+|+.+++.++.+++||+|+ ....|++ . ...++..|++++.+++
T Consensus 41 ~~l~~~l~~~la~~~g~~----~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~-~----~~~~~~~g~~~~~~~~ 111 (418)
T 2c81_A 41 ESMERKFAKAFADFNGVP----YCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIA-T----ATAVLNVNALPVFVDV 111 (418)
T ss_dssp CCHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTH-H----HHHHHHTTCEEEEECB
T ss_pred HHHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHh-H----HHHHHHcCCEEEEEec
Confidence 356789999999999985 2788999999999999998778999966 4556664 2 2344578999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC--CCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK--DMDTLGLS 333 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~--d~~~l~l~ 333 (588)
+..++.+|+++|+++|+ +++++|+++ |+||...|+++| ++|+++|++||+|+++..+. +...++
T Consensus 112 ~~~~~~~d~~~l~~~i~--------~~~~~v~~~---~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-- 178 (418)
T 2c81_A 112 EADTYCIDPQLIKSAIT--------DKTKAIIPV---HLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAG-- 178 (418)
T ss_dssp CTTTCSBCHHHHGGGCC--------TTEEEECCB---CCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETT--
T ss_pred CCCCCCcCHHHHHHhhC--------CCCeEEEEe---CCcCCcccHHHHHHHHHHCCCEEEEECcccccCccCCEecc--
Confidence 74477899999998887 678888764 589999999999 99999999999999988762 112222
Q ss_pred CCCCcEEEecc--CccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCccccccccccccccc-CCCCCccc
Q 037063 334 LFKPDFLICSF--YKIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSK-FPESSISG 409 (588)
Q Consensus 334 ~~~~D~vv~S~--~K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e-~GT~~~~~ 409 (588)
.. .|+++.|+ ||++|. + +.|+++.+ +++++.+.+....+ +.....+ ......|.+ .||..+.+
T Consensus 179 ~~-~~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~~g 245 (418)
T 2c81_A 179 TI-GDIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLRADS-RVYCDDS---------SELMHGDMQLVKKGDIQG 245 (418)
T ss_dssp SS-SSEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHHBTT-EEECSCG---------GGCCTTCBSEEECCSSCC
T ss_pred cc-cceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHHHHHHhC-ccccccc---------cccccchhhccccccccC
Confidence 11 36777777 999994 3 56888875 46666665433221 1110000 000002211 22223222
Q ss_pred hh-hHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCC-CCcc-cEEEEEeecCCCC
Q 037063 410 VS-SKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVM-FDRG-PSLAFNVFDWNGT 486 (588)
Q Consensus 410 ~~-~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~-~~rg-~iv~f~~~~~~g~ 486 (588)
.. .+..+.+++......+++.+.++.+.+++++.+.|.++ ++++++++... .... .++.+.+.+....
T Consensus 246 ~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (418)
T 2c81_A 246 SNYCLSEFQSAILLDQLQELDDKNAIREKNAMFLNDALSKI---------DGIKVMKRPPQVSRQTYYGYVFRFDPVKFG 316 (418)
T ss_dssp CBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTS---------TTEEECCCCTTEEECCCSEEEEEECGGGTT
T ss_pred cCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---------CCcccCCCCCCCcccccEEEEEEEcccccc
Confidence 10 00112233332222246888899999999999999874 67888754321 1122 3666777531000
Q ss_pred CcCHHHHHHHHHhC-CcE---eccccccCcc---cccc-h-----------------HHHHHHHHhhhcCCCCCcCCccE
Q 037063 487 RIDPALVQKLADRH-NIS---LSCGFLQNIF---FSGE-Y-----------------EQERVRVLETRSGTNETRSGVSV 541 (588)
Q Consensus 487 ~i~~~~v~~~l~~~-gI~---v~~G~~c~~~---~~~~-~-----------------~~~~~~~l~~~~~~~~~~~g~~~ 541 (588)
.++...+.+.|.++ ||. ++.|+.+... +... + .-.....+. ...
T Consensus 317 ~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 385 (418)
T 2c81_A 317 GLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERAS-----------GQS 385 (418)
T ss_dssp TCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHH-----------HHE
T ss_pred ccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHH-----------hCE
Confidence 15677788777777 999 9888643210 0000 0 000001111 128
Q ss_pred EEEecCCCC-CHHHHHHHHHHHHHhhhh
Q 037063 542 VTAALGCLT-NFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 542 vRvSlg~~~-t~eDv~~li~~l~~~l~~ 568 (588)
||++++.++ |.|||++++++|++++++
T Consensus 386 lrl~~~~~~gt~edi~~~~~~l~~~~~~ 413 (418)
T 2c81_A 386 IVIHHAILLAEPSHLSLLVDAVAELARK 413 (418)
T ss_dssp EEEEGGGGGSCHHHHHHHHHHHHHHHHT
T ss_pred EEecCCccCCCHHHHHHHHHHHHHHHHh
Confidence 999999999 999999999999998764
No 117
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.91 E-value=1.1e-22 Score=221.49 Aligned_cols=315 Identities=11% Similarity=-0.008 Sum_probs=210.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhC---CCCCCC-----eEEEc-CCCchhHHHHHHHHHHhcC
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESY---PFYSNP-----RLLTV-YDHENEAAALMIESSKKRG 248 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~---~~~~gd-----~ll~~-~e~~s~~~~~~~~~a~~~G 248 (588)
.++++++++.+++++|++. .+++|+|+|+|+.+++.++ ..++|| +|++. ..|++ + ...++..|
T Consensus 106 ~~l~~~l~~~la~~~g~~~---~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~--~---~~~~~~~G 177 (474)
T 1wyu_B 106 LRLMWELGEYLKALTGMDA---ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGS--N---PATASMAG 177 (474)
T ss_dssp HHHHHHHHHHHHHHHTCSE---EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTH--H---HHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCc---eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChh--h---HHHHHHCC
Confidence 5788999999999999963 4788999999988644332 134676 76654 44543 2 23456789
Q ss_pred CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCcc-CCHHHH-HHHHHcCcEEEEeCCCcCCCC
Q 037063 249 ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGAR-YSYMWM-SVAAEKGWHVLLDATALGSKD 326 (588)
Q Consensus 249 ~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~-~pl~~I-~~a~~~g~~vvvDaa~~~~~d 326 (588)
++++.++++ +++.+|+++|+++|+ +++++|+++++ |++|.+ .|+++| ++|+++|+++|+|+++..+.
T Consensus 178 ~~vv~v~~~-~~~~~d~~~L~~~i~--------~~t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~- 246 (474)
T 1wyu_B 178 YQVREIPSG-PEGEVDLEALKRELG--------PHVAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAI- 246 (474)
T ss_dssp CEEEEECBC-TTSSBCHHHHHHHCS--------TTEEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGT-
T ss_pred CEEEEecCC-CCCCcCHHHHHHhhC--------CCceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhh-
Confidence 999999997 678899999999998 67999999986 689998 699999 99999999999999986542
Q ss_pred CCCCCCCCCCCcEEEeccCccCCCCCC-----ceEEEEEeCcchhcccCCCCC-CCceEeeecCCCcccccccccccccc
Q 037063 327 MDTLGLSLFKPDFLICSFYKIFGENPS-----GFGCLFVKKSSASVLSGSTSS-VSTIMGIEPSFSEIIELETLDESSQS 400 (588)
Q Consensus 327 ~~~l~l~~~~~D~vv~S~~K~~G~~P~-----G~G~L~v~~~~~~~l~~~~~g-~~g~v~~~~~~~~~~~~~~~~~~~f~ 400 (588)
...+....+++|++++|+||+|+. |. |+|++++++++++.+.....+ +......... ... ...++
T Consensus 247 ~g~~~~~~~g~di~~~s~~K~~~~-p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~------~~~-~~~~~- 317 (474)
T 1wyu_B 247 MGWARPGDMGFDVVHLNLHKTFTV-PHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFD------RPK-SIGRV- 317 (474)
T ss_dssp TTTCCHHHHTCSEEECCTTTTTCC-CCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECC------CTT-CCCCS-
T ss_pred ccCCCcccCCCcEEEEeCcccccc-CCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEeccc------Ccc-cCccc-
Confidence 112222234589999999998875 64 699999999988777632211 0011000000 000 00122
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE
Q 037063 401 KFPESSISGVSSKLVECKGLDHADAL---GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA 477 (588)
Q Consensus 401 e~GT~~~~~~~~~~al~~aL~~l~~~---G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~ 477 (588)
..++.+. .++.+++.++..+ +++++.++...+++++.+.|.++ ++++..+.. ..+..++
T Consensus 318 ~~~~~~~------~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~~-~~~~~~~- 379 (474)
T 1wyu_B 318 RSFYGNF------LALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK----------GYRVPYDGP-SMHEFVA- 379 (474)
T ss_dssp SSTTSCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------TCBCSSCSS-CCSCEEE-
T ss_pred ccCcCcH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------CcEecCCCC-cceEEEE-
Confidence 3334332 2334555555543 45666888999999999999884 233321211 1111222
Q ss_pred EEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHH
Q 037063 478 FNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYR 557 (588)
Q Consensus 478 f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~ 557 (588)
.+. .+ ++...+.+.|.++||.+....+- . ...+.||+|++.+++.+|+++
T Consensus 380 -~~~--~~--~~~~~l~~~L~~~Gi~~~~~~~~-----------------~--------~~~~~lRis~~~~~t~e~id~ 429 (474)
T 1wyu_B 380 -QPP--EG--FRALDLAKGLLELGFHPPTVYFP-----------------L--------IVKEALMVEPTETEAKETLEA 429 (474)
T ss_dssp -BCS--TT--CCHHHHHHHHHHTTCCCCEESCS-----------------T--------TSTTCEEECCCTTSCHHHHHH
T ss_pred -EcC--CC--CCHHHHHHHHHHCCccccccccc-----------------c--------ccCCEEEEEeecCCCHHHHHH
Confidence 221 11 45777777777789986321110 0 112389999999999999999
Q ss_pred HHHHHHHhhhh
Q 037063 558 LWAFVSRFLDA 568 (588)
Q Consensus 558 li~~l~~~l~~ 568 (588)
+++.|++++++
T Consensus 430 ~~~~L~~~~~~ 440 (474)
T 1wyu_B 430 FAEAMGALLKK 440 (474)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHHHh
Confidence 99999998865
No 118
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.91 E-value=2.8e-23 Score=215.75 Aligned_cols=331 Identities=8% Similarity=-0.009 Sum_probs=211.2
Q ss_pred CeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHHH
Q 037063 111 NYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIMD 190 (588)
Q Consensus 111 ~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia~ 190 (588)
..++||+....+.++.+++++.+.... . ..|+. .....++|+++++
T Consensus 4 ~~i~~~~~~~~~p~~~~~~a~~~~~~~-----~---------------------------~~y~~--~~~~~~l~~~la~ 49 (347)
T 1jg8_A 4 MMIDLRSDTVTKPTEEMRKAMAQAEVG-----D---------------------------DVYGE--DPTINELERLAAE 49 (347)
T ss_dssp -CEECSCGGGCCCCHHHHHHHHTCCCC-----C---------------------------GGGTC--CHHHHHHHHHHHH
T ss_pred eEEEeccccCCCCCHHHHHHHhcCCCC-----C---------------------------cccCC--ChHHHHHHHHHHH
Confidence 468999999988888888876432210 0 00111 2345689999999
Q ss_pred HhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHH
Q 037063 191 FMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMK 270 (588)
Q Consensus 191 ~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~ 270 (588)
++|++ .+++++|+|+|+.+++.++ +++||+|++....|...+.. ...++..|++++.+ .+ +++.+|+++|++
T Consensus 50 ~~g~~----~~~~~~~gt~a~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~-~~~~~~~g~~~~~v-~~-~~~~~d~~~l~~ 121 (347)
T 1jg8_A 50 TFGKE----AALFVPSGTMGNQVSIMAH-TQRGDEVILEADSHIFWYEV-GAMAVLSGVMPHPV-PG-KNGAMDPDDVRK 121 (347)
T ss_dssp HHTCS----EEEEESCHHHHHHHHHHHH-CCTTCEEEEETTCHHHHSST-THHHHHTCCEEEEE-CE-ETTEECHHHHHH
T ss_pred HhCCc----eEEEecCcHHHHHHHHHHh-cCCCCEEEEcCcchhhhccc-cchhhccCeEEEEe-cC-CCCccCHHHHHH
Confidence 99984 3889999999999998888 88999977655444212211 12445679999988 54 567789999999
Q ss_pred HHhhhccccCCCcceEEEEeCCCCCC-CccCCHH---HH-HHHHHcCcEEEEeCCCcC------CCCCCCCCCCCCCCcE
Q 037063 271 KIVGKRKKKKKKKRGLFVFPLQSKVT-GARYSYM---WM-SVAAEKGWHVLLDATALG------SKDMDTLGLSLFKPDF 339 (588)
Q Consensus 271 ~i~~~~~~~~~~~t~Lv~~~~~sn~t-G~~~pl~---~I-~~a~~~g~~vvvDaa~~~------~~d~~~l~l~~~~~D~ 339 (588)
+|+.. ....+++++|++++++|+| |..+|++ +| ++|+++|++|++|+++.. +.+..++. ..+|.
T Consensus 122 ~i~~~--~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~ 196 (347)
T 1jg8_A 122 AIRPR--NIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYA---GYADS 196 (347)
T ss_dssp HSCCS--CTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHH---HTCSE
T ss_pred Hhccc--cccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhc---ccccE
Confidence 98710 0001268999999999999 9999975 46 889999999999998633 21122221 13788
Q ss_pred EEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHH
Q 037063 340 LICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKG 419 (588)
Q Consensus 340 vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~a 419 (588)
+++|+||++|. |.| |+++.++++++.+...... ..++........ ++...+
T Consensus 197 ~~~s~sK~l~~-~~G-~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~-~~~~~~ 247 (347)
T 1jg8_A 197 VMFCLSKGLCA-PVG-SVVVGDRDFIERARKARKM--------------------------LGGGMRQAGVLA-AAGIIA 247 (347)
T ss_dssp EEEESSSTTCC-SSC-EEEEECHHHHHHHHHHHHH--------------------------HTCCCSSTHHHH-HHHHHH
T ss_pred EEEecccccCC-Cce-EEEEcCHHHHHHHHHHHHH--------------------------cCCchhHHHHHH-HHHHHH
Confidence 89999998884 544 3556666666554321100 001111111100 111233
Q ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHh
Q 037063 420 LDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADR 499 (588)
Q Consensus 420 L~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~ 499 (588)
++.. .+.+.+ ..+.++++.+.|.++ ++++..+ ...++++.+.+.+. + ++...+.+.|.+
T Consensus 248 l~~~----~~~~~~-~~~~~~~l~~~L~~~----------~~~~~~~---~~~~~~~~~~~~~~-~--~~~~~~~~~l~~ 306 (347)
T 1jg8_A 248 LTKM----VDRLKE-DHENARFLALKLKEI----------GYSVNPE---DVKTNMVILRTDNL-K--VNAHGFIEALRN 306 (347)
T ss_dssp HHHS----STTHHH-HHHHHHHHHHHHHHH----------TCBCCGG---GCCSSEEEEECTTS-S--SCHHHHHHHHHH
T ss_pred HHHH----HHHHHH-HHHHHHHHHHHHHhc----------CceeccC---CCcceEEEEEcccc-c--CCHHHHHHHHHH
Confidence 4321 122222 234556777777764 1222111 13467777776521 1 456777777778
Q ss_pred CCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 500 HNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 500 ~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+||.++.+. . ..||+|++.+++.||++++++.|++++++
T Consensus 307 ~gi~v~~~~----------------------------~--~~iRl~~~~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 307 SGVLANAVS----------------------------D--TEIRLVTHKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp HTEECEEEE----------------------------T--TEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEecCC----------------------------C--CeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 899987541 1 18999999999999999999999998753
No 119
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.91 E-value=3e-22 Score=211.97 Aligned_cols=321 Identities=11% Similarity=0.068 Sum_probs=208.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhC------CCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEE
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESY------PFYSNPRLL-TVYDHENEAAALMIESSKKRGARV 251 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~------~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v 251 (588)
...+++|+.+++++|++ .++|++|+|+|+.+++.++ .+++||+|+ ...+|++ .. ..++..|+++
T Consensus 34 ~~~~~l~~~la~~~~~~----~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~-~~----~~~~~~g~~~ 104 (390)
T 3b8x_A 34 EYVKQYETQFAKTFGSK----YAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWST-TY----YPLQQYGLRV 104 (390)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHH-HH----HHHHHTTCEE
T ss_pred hHHHHHHHHHHHHHCCC----cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHH-HH----HHHHHcCCEE
Confidence 45679999999999985 3889999999999999998 578899965 5667765 22 2345689999
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC--CCC
Q 037063 252 SSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK--DMD 328 (588)
Q Consensus 252 ~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~--d~~ 328 (588)
+.++++..++.+|+++|+++|+ +++++|++++ ++|...|+++| ++|+++|+++|+|+++..+. +..
T Consensus 105 ~~~~~~~~~~~~d~~~l~~~i~--------~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~ 173 (390)
T 3b8x_A 105 KFVDIDINTLNIDIESLKEAVT--------DSTKAILTVN---LLGNPNNFDEINKIIGGRDIILLEDNCESMGATFNNK 173 (390)
T ss_dssp EEECBCTTTCSBCHHHHHHHCC--------TTEEEEEEEC---GGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETTE
T ss_pred EEEecCccccCcCHHHHHHHhC--------cCCeEEEEEC---CccChhhHHHHHHHHHHcCCEEEEECcCcccCEECCc
Confidence 9999984458899999999997 6789999874 68999999999 99999999999999998762 222
Q ss_pred CCCCCCCCCcEEEecc---CccCCCCCCceEEEEEeC-cchhcccCCCCCCC-ce---EeeecCCCcccccccccccccc
Q 037063 329 TLGLSLFKPDFLICSF---YKIFGENPSGFGCLFVKK-SSASVLSGSTSSVS-TI---MGIEPSFSEIIELETLDESSQS 400 (588)
Q Consensus 329 ~l~l~~~~~D~vv~S~---~K~~G~~P~G~G~L~v~~-~~~~~l~~~~~g~~-g~---v~~~~~~~~~~~~~~~~~~~f~ 400 (588)
.++. .+|+.++|+ ||+.+ |.| |++++++ ++.+.+++...++. +. ............+. .. ..|+
T Consensus 174 ~~g~---~~~~~~~s~~~~k~~~~--g~g-G~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~-~~~~ 245 (390)
T 3b8x_A 174 CAGT---FGLMGTFSSFYSNHIAT--MEG-GCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFE-ES-FKFV 245 (390)
T ss_dssp ETTS---SSSEEEEECCTTSSSCS--SSC-EEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTT-SS-SCBC
T ss_pred cccc---ccceEEEEccCCCCCcc--CCc-eEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccc-cc-ccee
Confidence 2331 146666553 55544 556 8998887 45555544322210 00 00000000000000 00 0222
Q ss_pred cCC----CCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE
Q 037063 401 KFP----ESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL 476 (588)
Q Consensus 401 e~G----T~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv 476 (588)
..| +.++.+. .++..++. ++.+.++.+++++++.+.|.++ ++++++++. .+.+.+
T Consensus 246 ~~g~~~~~~~~~aa-------~~l~~l~~--l~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~~~---~~~~~~ 304 (390)
T 3b8x_A 246 LPGYNVRPLEMSGA-------IGIEQLKK--LPRFISVRRKNAEYFLDKFKDH---------PYLDVQQET---GESSWF 304 (390)
T ss_dssp SCCCBCCCCHHHHH-------HHHHHHHH--HHHHHHHHHHHHHHHHHHHTTC---------SSEEECCCC---SBCCCC
T ss_pred ccccccCcCHHHHH-------HHHHHHHH--HHHHHHHHHHHHHHHHHHhcCC---------CCcccCCCC---CCcccE
Confidence 233 3333322 23333333 4778889999999999999874 678876642 233443
Q ss_pred --EEEeecCCCCCcCHHHHHHHHHhCCcEecc---ccccCc-cccc--c-----hHHHHHHHHhhhcCCCCCcCCccEEE
Q 037063 477 --AFNVFDWNGTRIDPALVQKLADRHNISLSC---GFLQNI-FFSG--E-----YEQERVRVLETRSGTNETRSGVSVVT 543 (588)
Q Consensus 477 --~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~---G~~c~~-~~~~--~-----~~~~~~~~l~~~~~~~~~~~g~~~vR 543 (588)
.+.+.+..| ++.+.+.+.|.++||.++. |+.|.. .... . ... ....+.. ..||
T Consensus 305 ~~~i~~~~~~~--~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----------~~l~ 370 (390)
T 3b8x_A 305 GFSFIIKKDSG--VIRKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVD-NAEYLDK-----------NGLF 370 (390)
T ss_dssp EEEEEECTTSC--CCHHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCH-HHHHHHH-----------HEEE
T ss_pred EEEEEecCcCc--ccHHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCCh-HHHHHhc-----------CEEE
Confidence 334442112 4678888888889999997 566653 2110 0 000 0111122 2899
Q ss_pred EecCCCCCHHHHHHHHHHH
Q 037063 544 AALGCLTNFEDTYRLWAFV 562 (588)
Q Consensus 544 vSlg~~~t~eDv~~li~~l 562 (588)
+|++.++|.|||+++++.|
T Consensus 371 l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 371 VGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp EECCSSCCHHHHHHHHHHT
T ss_pred eeCCCCCCHHHHHHHHHhh
Confidence 9999999999999999876
No 120
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.91 E-value=6.9e-23 Score=217.70 Aligned_cols=309 Identities=15% Similarity=0.132 Sum_probs=208.0
Q ss_pred HHHHHHHHHHh----CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 182 SKIRKRIMDFM----NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 182 ~~~r~~ia~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++|+.+++++ |.+.+...|++|+|+|+|+.+++.++ +++||+|++. ..|++ . ...++..|++++.++.
T Consensus 78 ~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~-~~~gd~vl~~~p~~~~-~----~~~~~~~g~~~~~v~~ 151 (407)
T 2zc0_A 78 PELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVL-IDPGDVVITENPSYIN-T----LLAFEQLGAKIEGVPV 151 (407)
T ss_dssp HHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCHH-H----HHHHHTTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHh-cCCCCEEEEeCCChHH-H----HHHHHHcCCEEEEccc
Confidence 46777777777 84333345999999999999999999 8899997654 44443 2 3455778999999998
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEE-EEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCCCcCCC-C---C
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLF-VFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDATALGSK-D---M 327 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv-~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa~~~~~-d---~ 327 (588)
+ +++ +|+++|+++++.. +....++++| ++++++|+||.++|++ +| ++|+++|+++|+|+++.... + .
T Consensus 152 ~-~~~-~d~~~l~~~l~~~--~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 227 (407)
T 2zc0_A 152 D-NDG-MRVDLLEEKIKEL--KAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDI 227 (407)
T ss_dssp E-TTE-ECHHHHHHHHHHH--HHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSC
T ss_pred C-CCC-CCHHHHHHHHHhh--hcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCC
Confidence 7 444 8999999998610 0011367886 6889999999999998 67 89999999999999976531 0 1
Q ss_pred CCC-CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 328 DTL-GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 328 ~~l-~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
..+ .+...+.++++.|++|++| +..++|++++++++++.+....... ..++..
T Consensus 228 ~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~ 281 (407)
T 2zc0_A 228 VPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKVLMQKQPI-------------------------DFCAPA 281 (407)
T ss_dssp CCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECCHHHHHHHHHHHTTT-------------------------TSSSCH
T ss_pred CChhhcCCCCCEEEEcccccccC-CCcceEEEecCHHHHHHHHHHHHhh-------------------------cCCCCH
Confidence 111 1112235688999999999 3345899999887776654322110 001111
Q ss_pred ccchhhHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCC
Q 037063 407 ISGVSSKLVECKGLDHA--DALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWN 484 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l--~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~ 484 (588)
+.. .++..+|+.. +...++++.++.+.+++++.+.|.++ .++++++.| ..+.++.+.+.+
T Consensus 282 ~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--------~~~~~~~~~----~~~~~~~~~~~~-- 343 (407)
T 2zc0_A 282 ISQ----YIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENH--------LPNAEFTKP----IAGMFVMFFLPE-- 343 (407)
T ss_dssp HHH----HHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHH--------CTTSCBCCC----SBSSEEEEECST--
T ss_pred HHH----HHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHh--------CCCCEEecC----CCcEEEEEEcCC--
Confidence 111 2333444432 20235677888888999999999873 244544443 234566677643
Q ss_pred CCCcCHHHHHHHHHhC-CcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 485 GTRIDPALVQKLADRH-NISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 485 g~~i~~~~v~~~l~~~-gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
+ ++...+.+.|.++ ||.++.|..|.... .+..+||+|++.. +.+|++++++.|+
T Consensus 344 ~--~~~~~l~~~l~~~~gi~v~~g~~~~~~~----------------------~~~~~iRis~~~~-~~~~i~~~~~~l~ 398 (407)
T 2zc0_A 344 G--ADGISFANELMEREGVVVVPGKPFYTDE----------------------SGKNAIRLNFSRP-SKEEIPIGIKKLA 398 (407)
T ss_dssp T--CCHHHHHHHHHHHTCEECBCSGGGCSSS----------------------CCTTEEEEECSSS-CTTHHHHHHHHHH
T ss_pred C--CCHHHHHHHHHHhCCeEEECchhccCCC----------------------CCCCeEEEEeCCC-CHHHHHHHHHHHH
Confidence 1 4566666666555 99999886653110 1223899999987 8999999999999
Q ss_pred Hhhhhh
Q 037063 564 RFLDAD 569 (588)
Q Consensus 564 ~~l~~~ 569 (588)
+++++.
T Consensus 399 ~~l~~~ 404 (407)
T 2zc0_A 399 KLYKEK 404 (407)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988653
No 121
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.91 E-value=1.7e-22 Score=214.41 Aligned_cols=327 Identities=13% Similarity=0.074 Sum_probs=215.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....++|+.|++++|+ + .|++|+|+|+|+.+++.++.+++||+|+ ....|++. . ..++..|++++.++++
T Consensus 32 ~~~~~l~~~la~~~~~--~--~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~-~----~~~~~~g~~~~~v~~~ 102 (394)
T 1o69_A 32 EFVNRFEQSVKDYSKS--E--NALALNSATAALHLALRVAGVKQDDIVLASSFTFIAS-V----APICYLKAKPVFIDCD 102 (394)
T ss_dssp HHHHHHHHHHHHHHCC--S--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGG-T----HHHHHTTCEEEEECBC
T ss_pred hHHHHHHHHHHHHhCC--C--cEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHH-H----HHHHHcCCEEEEEEeC
Confidence 5677999999999998 2 4999999999999999998778999965 55666652 2 2334579999999998
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCC--CCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDM--DTLGLSL 334 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~--~~l~l~~ 334 (588)
.++.+|+++|+++|++ . ..++++|++++ ++|...|+++| ++|+++|+++|+|+++..+... ..++ +.
T Consensus 103 -~~~~~d~~~l~~~i~~----~-~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~-~~ 172 (394)
T 1o69_A 103 -ETYNIDVDLLKLAIKE----C-EKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALG-TF 172 (394)
T ss_dssp -TTSSBCHHHHHHHHHH----C-SSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETT-SS
T ss_pred -CCCCcCHHHHHHHHhc----c-cCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCCcccc-cc
Confidence 7788999999999972 0 01689999886 79999999999 9999999999999998864111 1111 11
Q ss_pred CCCcEEEeccCccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhH
Q 037063 335 FKPDFLICSFYKIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSK 413 (588)
Q Consensus 335 ~~~D~vv~S~~K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~ 413 (588)
..+|++++|.+|.+| |.++|+++++ +++++.+...... +... .+ .+.. ....| ..||+++.+.
T Consensus 173 ~~~~~~s~s~~K~l~--~~~~G~~~~~~~~l~~~l~~~~~~--~~~~-~~------~~~~-~~~g~-~~~~~~~~aa--- 236 (394)
T 1o69_A 173 GEFGVYSYNGNKIIT--TSGGGMLIGKNKEKIEKARFYSTQ--AREN-CL------HYEH-LDYGY-NYRLSNVLGA--- 236 (394)
T ss_dssp SSEEEEECCTTSSSC--CSSCEEEEESCHHHHHHHHHHTBT--CCCS-SS------SCCC-SSCCC-BCBCCHHHHH---
T ss_pred cCcEEEEEeCCccCC--CCCceEEEECCHHHHHHHHHHHHh--cccc-Cc------cccc-cccCc-ccCcCHHHHH---
Confidence 237888888899888 6789999996 5777666543211 1100 00 0000 00022 3334444332
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc--cEEEEEeecCC-------
Q 037063 414 LVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG--PSLAFNVFDWN------- 484 (588)
Q Consensus 414 ~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg--~iv~f~~~~~~------- 484 (588)
.++..++. ++++.++.+.+++++.+.|.+ . ++++++.. ..++ .++.|.+.+..
T Consensus 237 ----~~l~~l~~--l~~~~~~~~~~~~~l~~~L~~---------~--~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~ 298 (394)
T 1o69_A 237 ----IGVAQMEV--LEQRVLKKREIYEWYKEFLGE---------Y--FSFLDELE-NSRSNRWLSTALINFDKNELNACQ 298 (394)
T ss_dssp ----HHHHHHTT--HHHHHHHHHHHHHHHHHHHTT---------T--EECCCCCT-TEECCCSSEEEEESCCGGGSCCCC
T ss_pred ----HHHHHHHH--HHHHHHHHHHHHHHHHHHhcc---------c--ccccCCCC-CCcceeEEEEEEecchhhcccccc
Confidence 22222221 466778889999999999976 3 55554421 1122 25677765310
Q ss_pred --------CC--CcCHHHHHHHHHhCCcEecccccc---Ccccccc-h-HHHHHHHHhhhcCCCCCcCCccEEEEecCCC
Q 037063 485 --------GT--RIDPALVQKLADRHNISLSCGFLQ---NIFFSGE-Y-EQERVRVLETRSGTNETRSGVSVVTAALGCL 549 (588)
Q Consensus 485 --------g~--~i~~~~v~~~l~~~gI~v~~G~~c---~~~~~~~-~-~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~ 549 (588)
|. .++...+.+.|.++||.++.|..| .+.+... . .-.....+.. ..+|++.+.+
T Consensus 299 ~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 367 (394)
T 1o69_A 299 KDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQ-----------KGICLPSGTA 367 (394)
T ss_dssp EEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHH-----------HEEEECCCTT
T ss_pred ccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhc-----------CeEEccCCCC
Confidence 00 135677888888899999999554 2221110 0 0000111111 1677777999
Q ss_pred CCHHHHHHHHHHHHHhhhhh
Q 037063 550 TNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 550 ~t~eDv~~li~~l~~~l~~~ 569 (588)
+|.|||+++++.|+++++..
T Consensus 368 ~t~edi~~~~~~l~~~~~~~ 387 (394)
T 1o69_A 368 MSKDDVYEISKLILKSIKAG 387 (394)
T ss_dssp CCHHHHHHHHHHHHHHHC--
T ss_pred CCHHHHHHHHHHHHHHHhcc
Confidence 99999999999999887654
No 122
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.91 E-value=4.6e-22 Score=210.45 Aligned_cols=303 Identities=12% Similarity=0.019 Sum_probs=203.9
Q ss_pred hHHHHHHHHHHHHHhCCC---CCCceEEEecCHHHHHHHHHHhCCCCCC-----CeEEEc-CCCchhHHHHHHHHHHhcC
Q 037063 178 SELESKIRKRIMDFMNIS---EDDYTLVFTANQSSAFKLLAESYPFYSN-----PRLLTV-YDHENEAAALMIESSKKRG 248 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~---~~e~~vvft~g~T~al~lv~~s~~~~~g-----d~ll~~-~e~~s~~~~~~~~~a~~~G 248 (588)
.++.+.+.+.+.+.+|.+ ++ ..|++|+|+++|+.+++.++ .++| |+|++. ..|+. . ...++..|
T Consensus 69 ~~lr~~la~~l~~~~g~~~~~~~-~~i~~t~g~~~al~~~~~~~-~~~g~~~~~d~vl~~~p~~~~-~----~~~~~~~g 141 (396)
T 3jtx_A 69 PELRQACANWLKRRYDGLTVDAD-NEILPVLGSREALFSFVQTV-LNPVSDGIKPAIVSPNPFYQI-Y----EGATLLGG 141 (396)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCTT-TSEEEESSHHHHHHHHHHHH-CCC---CCCCEEEEEESCCHH-H----HHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCCCCCCCC-CeEEEcCCcHHHHHHHHHHH-hCCCCccCCCEEEEcCCCcHh-H----HHHHHHcC
Confidence 345555556666666853 54 14999999999999999999 7886 676654 44442 2 34567789
Q ss_pred CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcCC
Q 037063 249 ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALGS 324 (588)
Q Consensus 249 ~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~~ 324 (588)
++++.++++..+..+|.++|++++. +++++|++++++|+||..+|.++ | ++|+++|+++|+|+++...
T Consensus 142 ~~~~~v~~~~~g~~~d~~~l~~~~~--------~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 213 (396)
T 3jtx_A 142 GEIHFANCPAPSFNPDWRSISEEVW--------KRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEI 213 (396)
T ss_dssp CEEEEEECCTTTCCCCGGGSCHHHH--------HTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTC
T ss_pred CEEEEeecCCCCCccCHHHHHHhhc--------cCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 9999999863444689999999998 57999999999999999999888 6 7899999999999996642
Q ss_pred C-CC-CCCCC--------CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 325 K-DM-DTLGL--------SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 325 ~-d~-~~l~l--------~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
. +- ..+.. .....++++.|++|.+|.+..++|+++.++++++.+......
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~-------------------- 273 (396)
T 3jtx_A 214 YFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTY-------------------- 273 (396)
T ss_dssp CSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHHHHHHHHHH--------------------
T ss_pred ccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHHHHHHHHhh--------------------
Confidence 1 11 11110 014478999999998774334589999888877665432110
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
..++.+.... +++..+|+..+ .++++.++++.+.+++.+.|.++ +.++.| ..+.
T Consensus 274 ------~~~~~~~~~~---~a~~~~l~~~~--~~~~~~~~~~~~~~~l~~~l~~~-----------~~~~~~----~~~~ 327 (396)
T 3jtx_A 274 ------HGSAMSIPVQ---RASIAAWDDEQ--HVIDNRRLYQEKFERVIPILQQV-----------FDVKLP----DASF 327 (396)
T ss_dssp ------HTCCCCHHHH---HHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHTTT-----------SCCCCC----SSSS
T ss_pred ------cccCCCHHHH---HHHHHHhCCHH--HHHHHHHHHHHHHHHHHHHHHhc-----------CCccCC----CeeE
Confidence 1112222222 33344554311 25777888888888888888763 112222 2244
Q ss_pred EEEEEeecCCCCCcCHHHHH-HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHH
Q 037063 475 SLAFNVFDWNGTRIDPALVQ-KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFE 553 (588)
Q Consensus 475 iv~f~~~~~~g~~i~~~~v~-~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~e 553 (588)
++.+.+.+ .+...+. ++++++||.+++|..|...... ...+..+||+|++. +.+
T Consensus 328 ~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~------------------~~~~~~~iRis~~~--~~~ 382 (396)
T 3jtx_A 328 YIWLKVPD-----GDDLAFARNLWQKAAIQVLPGRFLARDTEQ------------------GNPGEGYVRIALVA--DVA 382 (396)
T ss_dssp EEEEECTT-----SCHHHHHHHHHHHHCEECEEGGGGCCCCTT------------------CCTTTTEEEEECCS--CHH
T ss_pred EEEEECCC-----CCHHHHHHHHHHHCCEEEeCChHhCCcccc------------------cCCCCCeEEEEEcC--CHH
Confidence 55556654 3455554 4557789999999877432000 00223499999876 999
Q ss_pred HHHHHHHHHHHhh
Q 037063 554 DTYRLWAFVSRFL 566 (588)
Q Consensus 554 Dv~~li~~l~~~l 566 (588)
|++++++.|++++
T Consensus 383 ~i~~~l~~l~~~l 395 (396)
T 3jtx_A 383 TCVKAAEDIVSLY 395 (396)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998875
No 123
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.91 E-value=9.4e-23 Score=215.93 Aligned_cols=324 Identities=11% Similarity=0.103 Sum_probs=220.2
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|+|.++. |+.|+.+.+++.+.+... .+. + + .| ..+..++
T Consensus 43 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~--~~~-~--------------------~-----~~---~~~~~~~ 91 (395)
T 1vef_A 43 EGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETL--MAM-P--------------------Q-----TL---PTPMRGE 91 (395)
T ss_dssp TSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHC--CCC-C--------------------T-----TS---CCHHHHH
T ss_pred CCCEEEEccCccccccCCCCCHHHHHHHHHHHHhC--CCC-c--------------------c-----cc---CCHHHHH
Confidence 56789998654 667888888886665321 111 0 0 01 1456789
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEE-EcCCCchhHHHHHHHHHHhcCCE-----------
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLL-TVYDHENEAAALMIESSKKRGAR----------- 250 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~----------- 250 (588)
++++++++++++++ .|+||+|+|+|+.+++.++. +.+|++|+ ....||+....++ +..|.+
T Consensus 92 l~~~la~~~~~~~~--~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~----~~~g~~~~~~~~~p~~~ 165 (395)
T 1vef_A 92 FYRTLTAILPPELN--RVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSL----SVTWEPKYREPFLPLVE 165 (395)
T ss_dssp HHHHHHHTSCTTEE--EEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHH----HTCCCHHHHGGGCSCSS
T ss_pred HHHHHHHhcCCCcC--EEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhh----hhcCCcccccccCCCCC
Confidence 99999999988654 49999999999999988751 25688855 5556665333232 233543
Q ss_pred -EEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCc-C
Q 037063 251 -VSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATAL-G 323 (588)
Q Consensus 251 -v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~-~ 323 (588)
+..++. .|+++|+++|+ +++++|++.+++|+||.+.| +++| ++|+++|+++|+|+++. +
T Consensus 166 ~~~~~~~------~d~~~l~~~i~--------~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~ 231 (395)
T 1vef_A 166 PVEFIPY------NDVEALKRAVD--------EETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGM 231 (395)
T ss_dssp CEEEECT------TCHHHHHHHCC--------TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred CeeEeCC------CcHHHHHHHhc--------cCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCC
Confidence 333332 47899999987 67899999999999999998 9999 99999999999999987 3
Q ss_pred CCCCC--CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccccccccc
Q 037063 324 SKDMD--TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSK 401 (588)
Q Consensus 324 ~~d~~--~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e 401 (588)
+..-. .++.....+|++ |++|.+|. +.++|++++++++++.+.....+ +
T Consensus 232 ~~~g~~~~~~~~~~~~d~~--s~sK~~~~-g~~~G~~~~~~~~~~~l~~~~~~--~------------------------ 282 (395)
T 1vef_A 232 GRTGKRFAFEHFGIVPDIL--TLAKALGG-GVPLGVAVMREEVARSMPKGGHG--T------------------------ 282 (395)
T ss_dssp TTTSSSSTHHHHTCCCSEE--EECGGGGT-TSSCEEEEEEHHHHHTSCTTSSC--C------------------------
T ss_pred ccCCchhHhhhcCCCCCEE--EEcccccC-CCceEEEEehHHHHhhhccCCcC--C------------------------
Confidence 21101 111112237866 77998885 67899999999877766542111 0
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEee
Q 037063 402 FPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVF 481 (588)
Q Consensus 402 ~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~ 481 (588)
..+.+... .+++.++|+.+.. +.+.++++.+++++.+.|.++. .+.+.... ..+.++.+.+.
T Consensus 283 ~~~~~~~~---~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~-------~~~~~~~~-----~~g~~~~~~~~ 344 (395)
T 1vef_A 283 TFGGNPLA---MAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIP-------SPKIREVR-----GMGLMVGLELK 344 (395)
T ss_dssp SSTTCHHH---HHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSC-------CTTEEEEE-----EETTEEEEEES
T ss_pred CcCCCHHH---HHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhh-------cCceEEEE-----EEEEEEEEEEc
Confidence 00122222 2455567777654 4577888999999999998862 22222111 24678888775
Q ss_pred cCCCCCcCHHHHHHHHH-hCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 482 DWNGTRIDPALVQKLAD-RHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 482 ~~~g~~i~~~~v~~~l~-~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
+ +...+.+.|. ++||.++.+. . ..||++++++++.+|++++++
T Consensus 345 ~------~~~~l~~~l~~~~gi~v~~~~----------------------------~--~~iRi~~~~~~~~~~i~~~~~ 388 (395)
T 1vef_A 345 E------KAAPYIARLEKEHRVLALQAG----------------------------P--TVIRFLPPLVIEKEDLERVVE 388 (395)
T ss_dssp S------CSHHHHHHHHHHHCEECEESS----------------------------T--TEEEECCCTTCCHHHHHHHHH
T ss_pred C------hHHHHHHHHHHHCCeEEecCC----------------------------C--CEEEEeCCCCCCHHHHHHHHH
Confidence 4 1345555555 8899987641 1 289999999999999999999
Q ss_pred HHHHhhh
Q 037063 561 FVSRFLD 567 (588)
Q Consensus 561 ~l~~~l~ 567 (588)
.|+++++
T Consensus 389 ~l~~~l~ 395 (395)
T 1vef_A 389 AVRAVLA 395 (395)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9998763
No 124
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.91 E-value=6.2e-23 Score=215.47 Aligned_cols=311 Identities=11% Similarity=0.058 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....++|+.+++++|++ .++||+|+|+|+.+++.++.+++||+|+ ....|++ . ...++..|++++.++++
T Consensus 35 ~~~~~l~~~la~~~~~~----~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~-~----~~~~~~~G~~~~~~~~~ 105 (367)
T 3nyt_A 35 PEVTELEDRLADFVGAK----YCISCANGTDALQIVQMALGVGPGDEVITPGFTYVA-T----AETVALLGAKPVYVDID 105 (367)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTH-H----HHHHHHTTCEEEEECBC
T ss_pred hHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHH-H----HHHHHHcCCEEEEEecC
Confidence 45679999999999985 3999999999999999998788999966 5566664 2 23456789999999998
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC--CCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK--DMDTLGLSL 334 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~--d~~~l~l~~ 334 (588)
..++.+|+++|+++|+ +++++|+ ++|++|...|+++| ++|+++|+++|+|+++..+. +...++ .
T Consensus 106 ~~~~~~d~~~l~~~i~--------~~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~--~ 172 (367)
T 3nyt_A 106 PRTYNLDPQLLEAAIT--------PRTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSC--N 172 (367)
T ss_dssp TTTCSBCGGGTGGGCC--------TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETT--S
T ss_pred CccCCcCHHHHHHhcC--------cCCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCeecc--C
Confidence 5558899999999887 6888887 67799999999999 99999999999999988652 122222 1
Q ss_pred CCCcEEEecc--CccCCCCCCc-eEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCC-CCCccc
Q 037063 335 FKPDFLICSF--YKIFGENPSG-FGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP-ESSISG 409 (588)
Q Consensus 335 ~~~D~vv~S~--~K~~G~~P~G-~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G-T~~~~~ 409 (588)
+ .|++++|| +|++| +.| .|+++.++ ++.+.++..... |.... +. ....| +.....
T Consensus 173 ~-~di~~~Sf~~~K~l~--~~g~gg~~~~~~~~l~~~~~~~~~~--g~~~~---------~~------~~~~g~~~~~~~ 232 (367)
T 3nyt_A 173 L-STVACTSFFPSAPLG--CYGDGGAIFTNDDELATAIRQIARH--GQDRR---------YH------HIRVGVNSRLDT 232 (367)
T ss_dssp S-SSEEEEECCTTSSSC--CSSCCEEEEESCHHHHHHHHHHTBT--TEEET---------TE------ECSCCCBCCCCH
T ss_pred C-CCEEEEECCCCCcCC--CcCceeEEEeCCHHHHHHHHHHHhc--CCCcC---------ce------eeccCcCCCccH
Confidence 2 29999997 79998 434 56666654 455555543322 11100 00 00122 222222
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCC-CCcccEEEEEeecCCCCCc
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVM-FDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~-~~rg~iv~f~~~~~~g~~i 488 (588)
+ ....++..++. ++.+.++.+++++++.+.|.++ + +++...... .....++.+.+.
T Consensus 233 ~----~aa~~~~~l~~--~~~~~~~~~~~~~~~~~~L~~~-------~---~~~~~~~~~~~~~~~~~~~~~~------- 289 (367)
T 3nyt_A 233 L----QAAILLPKLEI--FEEEIALRQKVAAEYDLSLKQV-------G---IGTPFIEVNNISVYAQYTVRMD------- 289 (367)
T ss_dssp H----HHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHT-------T---CCCCCCCTTEECCCSSEEEECS-------
T ss_pred H----HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhccC-------C---eeccCCCCCCceeeEEEEEEeC-------
Confidence 2 22233333433 5778888899999999999985 1 222111110 011123333332
Q ss_pred CHHHHHHHHHhCCcEeccccccCcccccchH-----HHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 489 DPALVQKLADRHNISLSCGFLQNIFFSGEYE-----QERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 489 ~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~-----~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
+.+.+.+.|.++||.++.+..+.......+. -.....+.. ..||++++..+|.|||+++++.|+
T Consensus 290 ~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~lp~~~~~t~~~i~~v~~~~~ 358 (367)
T 3nyt_A 290 NRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAAT-----------QVMSLPMHPYLDTASIKIICAALT 358 (367)
T ss_dssp SHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHH-----------HEEEECCCTTCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHh-----------CeEEccCCCCCCHHHHHHHHHHHH
Confidence 3677888888899999887532111111110 001111222 289999999999999999999998
Q ss_pred Hh
Q 037063 564 RF 565 (588)
Q Consensus 564 ~~ 565 (588)
++
T Consensus 359 ~~ 360 (367)
T 3nyt_A 359 NL 360 (367)
T ss_dssp C-
T ss_pred HH
Confidence 75
No 125
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.91 E-value=2.6e-23 Score=220.68 Aligned_cols=345 Identities=12% Similarity=0.006 Sum_probs=227.1
Q ss_pred CCCCCCCCHHHHHHhhhhccc-CcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchh-HHHHHHHHHHHHHhCC
Q 037063 117 YIGHGLFSYSQMHSCSSNVHS-SAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEES-ELESKIRKRIMDFMNI 194 (588)
Q Consensus 117 ~a~~gl~~~~~~~~~~~~~~~-~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~-~~~~~~r~~ia~~lga 194 (588)
.++.+++++.+++++.+.+.. ...++|. +....|.... .+.+.+|+++++++|+
T Consensus 29 ~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------------------------~~~~~g~~~~~~~e~~ar~~la~~~g~ 84 (407)
T 2dkj_A 29 IASENFVSKQVREAVGSVLTNKYAEGYPG------------------------ARYYGGCEVIDRVESLAIERAKALFGA 84 (407)
T ss_dssp CTTCCCCCHHHHHHHTSGGGGCCCCEETT------------------------EESSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCCCCCHHHHHHHHhhhhcCcccCCCc------------------------ccccCCchHHHHHHHHHHHHHHHHhCC
Confidence 456666799999998766532 1222221 1111111111 3444588899999999
Q ss_pred CCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCC--EEEEEeccCCCCccCHHHHHHH
Q 037063 195 SEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGA--RVSSAEFAWPNLRIHSGKLMKK 271 (588)
Q Consensus 195 ~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~--~v~~v~~~~~~~~i~~e~l~~~ 271 (588)
++ ..+++.++|+|+.+++.++ +++||+|++ ...|++ .... ...++..|+ .++.++++..++.+|+++|+++
T Consensus 85 ~~---~~i~~~sGt~a~~~~~~~~-~~~gd~Vl~~~~~~~~-~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~ 158 (407)
T 2dkj_A 85 AW---ANVQPHSGSQANMAVYMAL-MEPGDTLMGMDLAAGG-HLTH-GSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRL 158 (407)
T ss_dssp SE---EECCCSSHHHHHHHHHHHH-CCTTCEEEEECGGGTC-CGGG-TCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHH
T ss_pred Cc---ceEEecchHHHHHHHHHHh-cCCCCEEEEecccccC-ccch-HHHHHhcCceEEEEecCCCcccCccCHHHHHHH
Confidence 63 2455555677999999998 899999664 444543 2100 011222344 3444443423677999999999
Q ss_pred HhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC---CCCCCCCCCCCCCcEEEeccCcc
Q 037063 272 IVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS---KDMDTLGLSLFKPDFLICSFYKI 347 (588)
Q Consensus 272 i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~---~d~~~l~l~~~~~D~vv~S~~K~ 347 (588)
++. .++++|+++.++|+ ...|+++| ++|+++|+++|+|+++..+ .+.....+. .+|+++.|+||+
T Consensus 159 l~~-------~~~~~v~~~~p~~~--~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~ 227 (407)
T 2dkj_A 159 ALE-------HRPKVIVAGASAYP--RFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP--YAHVVTSTTHKT 227 (407)
T ss_dssp HHH-------HCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT--TCSEEEEESSGG
T ss_pred Hhh-------cCCeEEEEeccccC--CCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc--cccEEEEecccc
Confidence 972 26889999777774 88999999 9999999999999997653 111111111 279999999996
Q ss_pred CCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHh
Q 037063 348 FGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADAL 426 (588)
Q Consensus 348 ~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~ 426 (588)
++. +.| |+++++ +++++.+.+.... + ..++++.... +++.++++.+...
T Consensus 228 l~g-~~~-G~~~~~~~~~~~~l~~~~~~------------------------~-~~~~~~~~~~---~a~~~al~~~~~~ 277 (407)
T 2dkj_A 228 LRG-PRG-GLILSNDPELGKRIDKLIFP------------------------G-IQGGPLEHVI---AGKAVAFFEALQP 277 (407)
T ss_dssp GCC-CSC-EEEEESCHHHHHHHHHHHTT------------------------T-TCSSCCHHHH---HHHHHHHHHHHSH
T ss_pred CCC-CCc-eEEEECCHHHHHHHHhhhcc------------------------c-ccCCCcHHHH---HHHHHHHHHHHHh
Confidence 652 666 999999 5776665432211 0 1233443332 4566788876544
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEecc
Q 037063 427 GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSC 506 (588)
Q Consensus 427 G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~ 506 (588)
+++++.++.+.+++++.+.|.++ +++++.+. ..+.++.+.+.+. + ++...+.+.|.++||.++.
T Consensus 278 ~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~---~~~~~~~~~~~~~-~--~~~~~~~~~l~~~gi~v~~ 341 (407)
T 2dkj_A 278 EFKEYSRLVVENAKRLAEELARR----------GYRIVTGG---TDNHLFLVDLRPK-G--LTGKEAEERLDAVGITVNK 341 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT----------TCEEGGGS---CSSSEEEEECGGG-T--CCHHHHHHHHHHTTEECEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHhC----------CceeecCC---CCceEEEEECccc-C--CCHHHHHHHHHHcCceecC
Confidence 67899999999999999999984 35666531 3577888877641 1 4577788888899999988
Q ss_pred ccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC----CCHHHHHHHHHHHHHhhhh
Q 037063 507 GFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL----TNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 507 G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~----~t~eDv~~li~~l~~~l~~ 568 (588)
|...... . . ......+|+|++.+ .+.+|++++++.|++++++
T Consensus 342 ~~~~~~~--~-----------~-------~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 342 NAIPFDP--K-----------P-------PRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp CCCTTCS--S-----------C-------TTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred CcCcccc--c-----------c-------ccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 7421000 0 0 01112899999764 7999999999999999877
No 126
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.91 E-value=3.5e-23 Score=221.82 Aligned_cols=314 Identities=14% Similarity=0.110 Sum_probs=207.0
Q ss_pred HHHHHHHHHHh----CCC-CCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 182 SKIRKRIMDFM----NIS-EDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 182 ~~~r~~ia~~l----ga~-~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++|+.|++++ |.+ .+...|++|+|+|+|+.+++.++ .++||+|++. ..|++ . ...++..|++++.++
T Consensus 88 ~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~-~----~~~~~~~g~~~~~v~ 161 (425)
T 1vp4_A 88 PVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLF-LDDESYCVLDDPAYLG-A----INAFRQYLANFVVVP 161 (425)
T ss_dssp HHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHH-CCTTCEEEEEESCCHH-H----HHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHh-CCCCCEEEEeCCCcHH-H----HHHHHHcCCEEEEec
Confidence 36777777777 943 22235999999999999999998 7899997654 44443 2 345567899999999
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEE-EEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCCCcCCC----C
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLF-VFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDATALGSK----D 326 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv-~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa~~~~~----d 326 (588)
.+ +++ +|+++|+++|+.........++++| ++++++|+||..+|.+ +| ++|+++|+++|+|+++.... .
T Consensus 162 ~~-~~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~ 239 (425)
T 1vp4_A 162 LE-DDG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGET 239 (425)
T ss_dssp EE-TTE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCC
T ss_pred cC-CCC-CCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCC
Confidence 87 444 8999999999720000001268887 6899999999999965 46 88999999999999976521 0
Q ss_pred CCCC-CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 327 MDTL-GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 327 ~~~l-~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
..++ .+...+.++++.|++|++| +..++|++++++++++.+...... + .. +.
T Consensus 240 ~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~~------------------------~-~~-~~ 292 (425)
T 1vp4_A 240 VDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSKEFIRKIVQAKQS------------------------A-DL-CS 292 (425)
T ss_dssp CCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCHHHHHHHHHHHHH------------------------H-HS-SC
T ss_pred CcCHHHhCCCCCEEEEeccccccc-cccceEEEeeCHHHHHHHHHHhhh------------------------h-cC-CC
Confidence 0111 1112236789999999998 334589999998877665432111 0 01 11
Q ss_pred CccchhhHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecC
Q 037063 406 SISGVSSKLVECKGLDHA--DALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDW 483 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l--~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~ 483 (588)
+.... +++..+|+.. .. .++++.++.+..++++.+.|.++. + +.++++++.| ..+.++.+.+.+
T Consensus 293 ~~~~~---~a~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~-~----~~~g~~~~~~----~~g~~~~~~~~~- 358 (425)
T 1vp4_A 293 PAITH---RLAARYLERYDLLE-QLKPTIELYRRKRTVMLNALEEYF-S----DIPGVKWVKS----EGGLFIWLTLPE- 358 (425)
T ss_dssp CHHHH---HHHHHHHHHSCHHH-HTHHHHHHHHHHHHHHHHHHHHHS-T----TSTTCEECCC----SBSSEEEEECCT-
T ss_pred CHHHH---HHHHHHHhcCCHHH-HHHHHHHHHHHHHHHHHHHHHHhC-C----CCCceEEecC----CccEEEEEEcCC-
Confidence 22211 3334455432 12 246777888888899999998740 0 0114676654 235567777653
Q ss_pred CCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 484 NGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 484 ~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
+ ++...+.+.|.++||.+++|..|... ..+.++||+|++.. +.+|++++++.|+
T Consensus 359 -~--~~~~~l~~~l~~~gi~v~~g~~f~~~----------------------~~~~~~iRis~~~~-~~e~i~~~l~~l~ 412 (425)
T 1vp4_A 359 -G--FDTWEMFEYAKRKKVFYVPGRVFKVY----------------------DEPSPSMRLSFCLP-PDEKIVEGIKRLR 412 (425)
T ss_dssp -T--CCTTTTHHHHHHHTEECEEGGGGCTT----------------------CCCCSEEEEECSSS-CHHHHHHHHHHHH
T ss_pred -C--CCHHHHHHHHHHCCCEEECchhhcCC----------------------CCCCCeEEEEeCCC-CHHHHHHHHHHHH
Confidence 1 23444555555559999988655210 01223899999975 8999999999999
Q ss_pred Hhhhhhh
Q 037063 564 RFLDADF 570 (588)
Q Consensus 564 ~~l~~~~ 570 (588)
+++++..
T Consensus 413 ~~l~~~~ 419 (425)
T 1vp4_A 413 EVVLEYG 419 (425)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887643
No 127
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.90 E-value=1e-22 Score=216.22 Aligned_cols=311 Identities=10% Similarity=0.013 Sum_probs=206.1
Q ss_pred cCCchhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEE
Q 037063 173 YGSEESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARV 251 (588)
Q Consensus 173 ~g~~~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v 251 (588)
|+.......+++|++|++++|++ .+++++|+|+|+.+++.++ +++||+|+ ....|++ ....+...++..|+++
T Consensus 60 y~r~~~~~~~~l~~~la~~~g~~----~~~~~~sGt~A~~~al~~~-~~~gd~Vi~~~~~y~~-~~~~~~~~~~~~g~~~ 133 (392)
T 3qhx_A 60 YARTGNPTRTALEAALAAVEDAA----FGRAFSSGMAAADCALRAM-LRPGDHVVIPDDAYGG-TFRLIDKVFTGWNVEY 133 (392)
T ss_dssp BTTTCCHHHHHHHHHHHHHTTCS----EEEEESSHHHHHHHHHHHH-CCTTCEEEEETTCCHH-HHHHHHHTGGGGTCEE
T ss_pred ccCCCChHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEeCCCcch-HHHHHHHHHHhcCcEE
Confidence 34334677889999999999985 3899999999999999988 89999966 4556664 3434345557789999
Q ss_pred EEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCC
Q 037063 252 SSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTL 330 (588)
Q Consensus 252 ~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l 330 (588)
+.++.+ |+++|+++|+ +++++|++++++|++|.+.|+++| ++|+++|+++|+|+++..+....++
T Consensus 134 ~~v~~~------d~~~l~~~i~--------~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~~~~ 199 (392)
T 3qhx_A 134 TPVALA------DLDAVRAAIR--------PTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQPL 199 (392)
T ss_dssp EEECTT------CHHHHHHHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGG
T ss_pred EEeCCC------CHHHHHHhhC--------CCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccCChH
Confidence 999874 7899999998 789999999999999999999999 9999999999999998776433333
Q ss_pred CCCCCCCcEEEeccCccCCCCCCc---eEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 331 GLSLFKPDFLICSFYKIFGENPSG---FGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 331 ~l~~~~~D~vv~S~~K~~G~~P~G---~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
+ ..+|+++.|+||++| +.| .|+++.++ ++.+.+...... ...+.+
T Consensus 200 ~---~~~di~~~S~sK~lg--~~g~~~~G~v~~~~~~~~~~l~~~~~~--------------------------~g~~~~ 248 (392)
T 3qhx_A 200 S---LGADVVLHSTTKYIG--GHSDVVGGALVTNDEELDQSFAFLQNG--------------------------AGAVPG 248 (392)
T ss_dssp G---GTCSEEEEETTTTTT--CSSCCCCEEEEESCHHHHHHHHHHHHH--------------------------HCCCCC
T ss_pred H---hCCcEEEEcCccccC--CCCCceEEEEEECcHHHHHHHHHHHHh--------------------------cCCCCC
Confidence 2 348999999999998 444 78888885 555544321110 000111
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCC------------CCcc
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVM------------FDRG 473 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~------------~~rg 473 (588)
... ...++..++. ++...++..+.++++.+.|.+. +.+ .++.|... ...|
T Consensus 249 ~~~------~~~~~~~l~~--l~~~~~~~~~~~~~l~~~L~~~---------~~v~~v~~p~l~~~~~~~~~~~~~~g~g 311 (392)
T 3qhx_A 249 PFD------AYLTMRGLKT--LVLRMQRHSENAAAVAEFLAEH---------PAISTVLYPGLPSHPGHAVAARQMRGFG 311 (392)
T ss_dssp HHH------HHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHTC---------TTEEEEECTTSTTSTTHHHHHHHCSSCC
T ss_pred HHH------HHHHHhhhhH--HHHHHHHHHHHHHHHHHHHhcC---------CCcceEECCCCCCCCCHHHHHHhCCCCc
Confidence 111 1122223322 2444555666677777777763 334 45444321 1237
Q ss_pred cEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCC--ccEEEEecCCCCC
Q 037063 474 PSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSG--VSVVTAALGCLTN 551 (588)
Q Consensus 474 ~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g--~~~vRvSlg~~~t 551 (588)
++++|.+.+. ......+...++..+|.++.|..|+......... ...+.. . ..| .+.||+|+|..++
T Consensus 312 ~~~~~~l~~~---~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~--~~~~~~-----~-~~g~~~~~iRlSvg~e~~ 380 (392)
T 3qhx_A 312 GMVSVRMRAG---RTAAEQLCAKTNIFILAESLGSVESLIEHPSAMT--HASTAG-----S-QLEVPDDLVRLSVGIEDV 380 (392)
T ss_dssp SEEEEEETTC---HHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTS--CGGGBT-----T-BCCCCTTEEEEECCSSCH
T ss_pred eEEEEEeCCc---HHHHHHHHHhCCCceECCCCCCCCceeeCccccc--ccccCH-----H-HcCCCCCeEEEEeccCCH
Confidence 8999998651 1123344445555678888887754211000000 000000 0 122 2389999999988
Q ss_pred HHHHHHHHHHH
Q 037063 552 FEDTYRLWAFV 562 (588)
Q Consensus 552 ~eDv~~li~~l 562 (588)
.++|+.|.++|
T Consensus 381 ~~~i~~l~~al 391 (392)
T 3qhx_A 381 ADLLDDLKQAL 391 (392)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 88888888775
No 128
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.90 E-value=8.3e-23 Score=217.54 Aligned_cols=298 Identities=13% Similarity=0.037 Sum_probs=203.9
Q ss_pred HHHHHHHHHHh----CCCCCC-ceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 182 SKIRKRIMDFM----NISEDD-YTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 182 ~~~r~~ia~~l----ga~~~e-~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
.++|+.|++++ |++.+. ..|++|+|+|+|+.+++.++ .++||+|++ ...|++ . ...++..|++++.++
T Consensus 88 ~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~-~----~~~~~~~g~~~~~v~ 161 (404)
T 2o1b_A 88 EAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCV-INPGDYVLLPDPGYTD-Y----LAGVLLADGKPVPLN 161 (404)
T ss_dssp HHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCSS-H----HHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHh-cCCCCEEEEcCCCchh-H----HHHHHHCCCEEEEec
Confidence 35666666666 875221 35999999999999999998 889999664 455554 2 234567899999999
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCH---HHH-HHHHHcCcEEEEeCCCcCCC-C---C
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSY---MWM-SVAAEKGWHVLLDATALGSK-D---M 327 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl---~~I-~~a~~~g~~vvvDaa~~~~~-d---~ 327 (588)
.+..+..+|+++|+++++ +++++|++++++|+||..+|. ++| ++|+++|+++|+|+++.... + .
T Consensus 162 ~~~~~~~~d~~~l~~~l~--------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~ 233 (404)
T 2o1b_A 162 LEPPHYLPDWSKVDSQII--------DKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNP 233 (404)
T ss_dssp CCTTTCCCCGGGSCHHHH--------HHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCC
T ss_pred cCcccCcCCHHHHHHhhc--------cCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCC
Confidence 874234588999999987 578999999999999999985 456 88999999999999976531 0 0
Q ss_pred CCCCCC-CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 328 DTLGLS-LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 328 ~~l~l~-~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
.-+.+. ....|+++.|++|++|.+..++|++++++++++.+...... ..++.+
T Consensus 234 ~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~--------------------------~~~~~~ 287 (404)
T 2o1b_A 234 SILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTH--------------------------TNAGMF 287 (404)
T ss_dssp CGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHHH--------------------------HCCCCC
T ss_pred ChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHHHHhh--------------------------ccCCCC
Confidence 111111 11357999999999983223479999988887766432211 011222
Q ss_pred ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc-EEEEEeecCCC
Q 037063 407 ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP-SLAFNVFDWNG 485 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~-iv~f~~~~~~g 485 (588)
.... +++..+|+.... .++++.++.+.+++++.+.|.++ +++++.+ .++ ++.+.+.+ +
T Consensus 288 ~~~~---~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~-----~~g~~~~~~~~~--~ 346 (404)
T 2o1b_A 288 GALQ---DAAIYALNHYDD-FLEEQSNVFKTRRDRFEAMLAKA----------DLPFVHA-----KGGIYVWLETPP--G 346 (404)
T ss_dssp HHHH---HHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHT----------TCCEECC-----CBSSEEEEECCT--T
T ss_pred HHHH---HHHHHHHhcCHH-HHHHHHHHHHHHHHHHHHHHHhc----------CCeecCC-----CcceEEEEeCCC--C
Confidence 2221 333445544222 26778888889999999999884 2444443 234 45556642 1
Q ss_pred CCcCHHHHHH-HHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHH
Q 037063 486 TRIDPALVQK-LADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSR 564 (588)
Q Consensus 486 ~~i~~~~v~~-~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~ 564 (588)
++...+.+ +++++||.+++|..|.. .+..+||+|++. +.++++++++.|++
T Consensus 347 --~~~~~l~~~l~~~~gi~v~~g~~f~~------------------------~~~~~iRis~~~--~~e~l~~~l~~l~~ 398 (404)
T 2o1b_A 347 --YDSEQFEQFLVQEKSILVAPGKPFGE------------------------NGNRYVRISLAL--DDQKLDEAAIRLTE 398 (404)
T ss_dssp --CCHHHHHHHHHHHHCEECEESGGGCG------------------------GGTTEEEEECCS--CTTHHHHHHHHHHG
T ss_pred --CCHHHHHHHHHHHCCEEEeCchhhCc------------------------CCCCeEEEEEcC--CHHHHHHHHHHHHH
Confidence 44556554 45578999998865521 112289999986 78899999999999
Q ss_pred hhhh
Q 037063 565 FLDA 568 (588)
Q Consensus 565 ~l~~ 568 (588)
++++
T Consensus 399 ~l~~ 402 (404)
T 2o1b_A 399 LAYL 402 (404)
T ss_dssp GGGG
T ss_pred HHHh
Confidence 8765
No 129
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.90 E-value=1e-21 Score=209.45 Aligned_cols=311 Identities=16% Similarity=0.074 Sum_probs=201.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+++|+.|++++|.+ ++++++|+++|+.+++.++ +++||+|++ ...|++ ....+...++..|++++.++.
T Consensus 61 ~~~~~~l~~~ia~~~g~~----~~i~~~~g~~ai~~~~~~l-~~~gd~Vl~~~~~y~~-~~~~~~~~~~~~g~~~~~v~~ 134 (404)
T 1e5e_A 61 NPTVSNLEGKIAFLEKTE----ACVATSSGMGAIAATVLTI-LKAGDHLISDECLYGC-THALFEHALTKFGIQVDFINT 134 (404)
T ss_dssp CHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHH-CCTTCEEEEESCCCHH-HHHHHHTHHHHTTCEEEEECT
T ss_pred ChHHHHHHHHHHHHhCCC----cEEEeCChHHHHHHHHHHH-hCCCCEEEEeCCCchh-HHHHHHHHHHHcCCEEEEECC
Confidence 456789999999999984 3777777789999999998 899999664 455554 333223356778999999987
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH-cCcEEEEeCCCcCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE-KGWHVLLDATALGSKDMDTLGLSL 334 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~-~g~~vvvDaa~~~~~d~~~l~l~~ 334 (588)
+ |.++|+++|+ +++++|++++++|+||.++|+++| ++|++ +|+++++|+++..+....++.
T Consensus 135 ~------d~~~l~~~i~--------~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~~--- 197 (404)
T 1e5e_A 135 A------IPGEVKKHMK--------PNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPVD--- 197 (404)
T ss_dssp T------STTHHHHHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGG---
T ss_pred C------CHHHHHHhcC--------CCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCccc---
Confidence 4 6788999887 689999999999999999999999 99999 999999999988763112322
Q ss_pred CCCcEEEeccCccCCCCCCc--eEEEEEeCcchh-cccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchh
Q 037063 335 FKPDFLICSFYKIFGENPSG--FGCLFVKKSSAS-VLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVS 411 (588)
Q Consensus 335 ~~~D~vv~S~~K~~G~~P~G--~G~L~v~~~~~~-~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~ 411 (588)
+++|+++.|++|+||. |.+ .|+++++++.++ .+.+...+. ..++.+....
T Consensus 198 ~~~di~~~S~sK~~~~-~g~ri~G~~~~~~~~~~~~l~~~~~~~-------------------------~g~~~~~~~~- 250 (404)
T 1e5e_A 198 FGVDVVVHSATKYING-HTDVVAGLICGKADLLQQIRMVGIKDI-------------------------TGSVISPHDA- 250 (404)
T ss_dssp GTCSEEEEETTTTTTC-SSCCCCEEEEECHHHHHHHHHTCCCCC-------------------------CCCCCCHHHH-
T ss_pred cCCEEEEEcCccccCC-CCCCeEEEEEECHHHHHHHHHHHHHhC-------------------------CCCCCCHHHH-
Confidence 3489999999998884 544 599999998877 665543220 0011111111
Q ss_pred hHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHccc------CCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCC
Q 037063 412 SKLVECKGLDHADALGLILISNRARYLINWLANALMNLH------HPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNG 485 (588)
Q Consensus 412 ~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~------h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g 485 (588)
.+...+++.+ +...++....++.+.+.|++.. ++.-+ ..|+++++.+.. ...+++++|.+.+
T Consensus 251 --~~~~~~l~~~-----~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~-~~p~~~~~~~~~-~~~g~~~~~~~~~--- 318 (404)
T 1e5e_A 251 --WLITRGLSTL-----NIRMKAESENAMKVAEYLKSHPAVEKVYYPGFE-DHEGHDIAKKQM-RMYGSMITFILKS--- 318 (404)
T ss_dssp --HHHHHHHTTH-----HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCS-SSTTHHHHHHHC-SSCCSEEEEEETT---
T ss_pred --HHHHHhHhHH-----HHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCC-CCccHHHHHhhC-CCCceEEEEEeCC---
Confidence 2223444432 3333444455555555665531 00000 011222222111 1248899997754
Q ss_pred CCcCHHHHHHHHHhCCcEecc---c------cccCcccccchHHHHHHHHhhhcCCCCCcCC--ccEEEEecCCCCCHHH
Q 037063 486 TRIDPALVQKLADRHNISLSC---G------FLQNIFFSGEYEQERVRVLETRSGTNETRSG--VSVVTAALGCLTNFED 554 (588)
Q Consensus 486 ~~i~~~~v~~~l~~~gI~v~~---G------~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g--~~~vRvSlg~~~t~eD 554 (588)
. .+.+.+++++.||.++. | ++|......... ...... .| .+.||+|++. ||
T Consensus 319 --~-~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~---~~~~~~--------~g~~~~~iRis~g~----e~ 380 (404)
T 1e5e_A 319 --G-FEGAKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVP---KEEREA--------AGITDGMIRLSVGI----ED 380 (404)
T ss_dssp --H-HHHHHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSC---HHHHHH--------TTCCTTEEEEECCS----SC
T ss_pred --C-HHHHHHHHHhCCCceeccCCCCcceeeecccccccccCC---HHHHHh--------cCCCCCeEEEEeCC----CC
Confidence 1 35678889999995443 2 334321100000 001111 23 2499999997 88
Q ss_pred HHHHHHHHHHhhhh
Q 037063 555 TYRLWAFVSRFLDA 568 (588)
Q Consensus 555 v~~li~~l~~~l~~ 568 (588)
++++++.|++.++.
T Consensus 381 ~~~li~~l~~al~~ 394 (404)
T 1e5e_A 381 ADELIADFKQGLDA 394 (404)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887764
No 130
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.90 E-value=5.2e-22 Score=214.58 Aligned_cols=307 Identities=14% Similarity=0.148 Sum_probs=208.1
Q ss_pred HHHHHHHHHHh----CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 182 SKIRKRIMDFM----NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 182 ~~~r~~ia~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++|+.|++++ |++ +...|++|+|+|+|+.+++.++ +++||+|++. ..|++ . ...++..|++++.++.
T Consensus 121 ~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l-~~~Gd~Vlv~~p~y~~-~----~~~~~~~g~~~~~v~~ 193 (448)
T 3aow_A 121 TPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVF-LNPGDIVVVEAPTYLA-A----LQAFNFYEPQYIQIPL 193 (448)
T ss_dssp HHHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCHH-H----HHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHH-cCCCCEEEEeCCChHH-H----HHHHHHcCCEEEEecc
Confidence 36777777777 984 3345999999999999999999 8999997654 44443 2 3455678999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEE-EEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCCCcCCC-C---C
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLF-VFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDATALGSK-D---M 327 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv-~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa~~~~~-d---~ 327 (588)
+ +++ +++++|+++|+.. .....++++| ++++++|+||..+|.+ +| ++|+++|+++|+|+++.... + .
T Consensus 194 ~-~~g-~d~~~L~~~l~~~--~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~ 269 (448)
T 3aow_A 194 D-DEG-MKVEILEEKLKEL--KSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPE 269 (448)
T ss_dssp E-TTE-ECHHHHHHHHHHH--HHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCC
T ss_pred C-CCC-CCHHHHHHHHhhh--hccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCC
Confidence 7 444 8999999998610 0011368887 6799999999999975 56 88999999999999965421 0 1
Q ss_pred CCC-CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 328 DTL-GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 328 ~~l-~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
.++ .++....++++.|++|.+| +...+|++++++++++.+...... + ..+++.
T Consensus 270 ~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~~l~~~l~~~~~~------------------------~-~~~~~~ 323 (448)
T 3aow_A 270 KKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPGIIRKMEIAKQS------------------------T-DLCTNV 323 (448)
T ss_dssp CCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECHHHHHHHHHHHHH------------------------H-HSSCCH
T ss_pred cCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCHHHHHHHHHHHHH------------------------h-cCCCCH
Confidence 111 2222346789999999998 333489999998887766432211 0 011111
Q ss_pred ccchhhHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC-eEEEeCCCCCCCcccEEEEEeecC
Q 037063 407 ISGVSSKLVECKGLDHA--DALGLILISNRARYLINWLANALMNLHHPHSETGIP-LVRIYGPKVMFDRGPSLAFNVFDW 483 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l--~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~-~v~i~~p~~~~~rg~iv~f~~~~~ 483 (588)
+.+ +++..+|+.. .. .++++.++.+..++++.+.|.+. .| +++++.| ..+.++.+.+.+
T Consensus 324 ~~q----~a~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~--------~~~g~~~~~p----~~g~~~~v~~~~- 385 (448)
T 3aow_A 324 FGQ----VVAWRYVDGGYLEK-HIPEIRKFYKPRRDAMLEALEEF--------MPEGVKWTKP----EGGMFIWVTLPD- 385 (448)
T ss_dssp HHH----HHHHHHHHTTHHHH-HHHHHHHHHHHHHHHHHHHHHHH--------CCTTCEECCC----SBSSEEEEECST-
T ss_pred HHH----HHHHHHHHhCCHHH-HHHHHHHHHHHHHHHHHHHHHHh--------CCCCeEEeCC----CccEEEEEEcCC-
Confidence 111 2333444321 11 15667777788889999999873 24 4666554 234566666653
Q ss_pred CCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHH
Q 037063 484 NGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVS 563 (588)
Q Consensus 484 ~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~ 563 (588)
+ ++...+.+.|.++||.+++|..|.+. ..+.++||+|++.. +.|||+++++.|.
T Consensus 386 -~--~~~~~l~~~l~~~gV~v~pg~~f~~~----------------------~~~~~~iRls~~~~-~~e~i~~~~~~L~ 439 (448)
T 3aow_A 386 -G--IDSKKMLERAIKKGVAYVPGEAFYAH----------------------RDVKNTMRLNFTYV-DEDKIMEGIKRLA 439 (448)
T ss_dssp -T--CCHHHHHHHHHHTTEECEEGGGGSTT----------------------CCCCSEEEEECSSS-CTHHHHHHHHHHH
T ss_pred -C--CCHHHHHHHHHHCCcEEEcchhhcCC----------------------CCCCCEEEEEeCCC-CHHHHHHHHHHHH
Confidence 1 45666766666679999988655310 01223899999874 8899999999999
Q ss_pred Hhhhhh
Q 037063 564 RFLDAD 569 (588)
Q Consensus 564 ~~l~~~ 569 (588)
+++++.
T Consensus 440 ~~l~~~ 445 (448)
T 3aow_A 440 ETIKEE 445 (448)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988654
No 131
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.90 E-value=4e-22 Score=211.84 Aligned_cols=315 Identities=14% Similarity=0.091 Sum_probs=207.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....++|+.+++++|++ .+++++|+|+|+.+++.++.+++||+|+ ....|++ . ...++..|++++.++++
T Consensus 63 ~~~~~l~~~la~~~~~~----~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~-~----~~~~~~~g~~~~~~~~~ 133 (399)
T 2oga_A 63 PELEGFEAEFAAYCETD----HAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIA-S----WLAVSATGATPVPVEPH 133 (399)
T ss_dssp HHHHHHHHHHHHHTTSS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTH-H----HHHHHHTTCEEEEECBC
T ss_pred hhHHHHHHHHHHHHCCC----eEEEecCHHHHHHHHHHHhCCCCcCEEEECCCccHH-H----HHHHHHCCCEEEEEecC
Confidence 45679999999999985 3889999999999999998778999966 4555654 2 23456789999999997
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC--CCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK--DMDTLGLSL 334 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~--d~~~l~l~~ 334 (588)
..++.+|+++|+++|+ +++++|+ ++|+||...|+++| ++|+++|+++|+|+++..+. +...++ .
T Consensus 134 ~~~~~~d~~~l~~~i~--------~~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~--~ 200 (399)
T 2oga_A 134 EDHPTLDPLLVEKAIT--------PRTRALL---PVHLYGHPADMDALRELADRHGLHIVEDAAQAHGARYRGRRIG--A 200 (399)
T ss_dssp SSSSSBCHHHHHHHCC--------TTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEETT--C
T ss_pred CCCCCcCHHHHHHhcC--------CCCeEEE---EeCCcCCccCHHHHHHHHHHcCCEEEEECcccccCccCCeecc--c
Confidence 4467899999999997 5788877 36789999999999 99999999999999987652 222222 1
Q ss_pred CCCcEEEeccC--ccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC-Cccch
Q 037063 335 FKPDFLICSFY--KIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES-SISGV 410 (588)
Q Consensus 335 ~~~D~vv~S~~--K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~-~~~~~ 410 (588)
-+|++++|+| |++|. |...|+++.+ +++++.+.+....+ +... +.. . ..|.. .+..+
T Consensus 201 -~~di~~~S~~~sK~~~~-~G~~g~~~~~~~~~~~~l~~~~~~g-~~~~----------~~~----~--~~g~~~~~~~~ 261 (399)
T 2oga_A 201 -GSSVAAFSFYPGKNLGC-FGDGGAVVTGDPELAERLRMLRNYG-SRQK----------YSH----E--TKGTNSRLDEM 261 (399)
T ss_dssp -TTCEEEEECCTTSSSCC-SSCCEEEEESCHHHHHHHHHHHBTT-CSST----------TCC----C--SCCCBCCCCHH
T ss_pred -ccCEEEEeCCCCccCCc-CCceEEEEeCCHHHHHHHHHHHhcC-cccc----------ccc----c--ccccCCCcCHH
Confidence 1699999995 99983 2246777776 56666655432221 1100 000 0 11211 11121
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE-EEEEeecCCCCCcC
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS-LAFNVFDWNGTRID 489 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i-v~f~~~~~~g~~i~ 489 (588)
..+++..+++. ++.+.++.+.+++++.+.|.++ +++++..... ...++ +.|.+.. .+
T Consensus 262 -~~a~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~~~--~~~~~~~~~~~~~-----~~ 319 (399)
T 2oga_A 262 -QAAVLRIRLAH-----LDSWNGRRSALAAEYLSGLAGL---------PGIGLPVTAP--DTDPVWHLFTVRT-----ER 319 (399)
T ss_dssp -HHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHTTTC---------TTCBCCCCCT--TEECCCSSEEEEC-----SS
T ss_pred -HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccC---------CCccccCCCC--CCcceeEEEEEEC-----CC
Confidence 11222334443 3556778888899999998874 4455433211 12222 2355443 24
Q ss_pred HHHHHHHHHhCCcEeccccc-cCcccccchH--------HHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 490 PALVQKLADRHNISLSCGFL-QNIFFSGEYE--------QERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 490 ~~~v~~~l~~~gI~v~~G~~-c~~~~~~~~~--------~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
...+.+.|.++||.++.++. +... ...+. -.....+. ...||++++.++|.|||+++++
T Consensus 320 ~~~l~~~L~~~gI~v~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~-----------~~~lRi~~~~~~t~edi~~~~~ 387 (399)
T 2oga_A 320 RDELRSHLDARGIDTLTHYPVPVHL-SPAYAGEAPPEGSLPRAESFA-----------RQVLSLPIGPHLERPQALRVID 387 (399)
T ss_dssp HHHHHHHHHHTTBCCBCSCSSCGGG-SHHHHTTSCCTTSCHHHHHHH-----------HHEEEECCSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCceecCCCCcccc-chhhcccCCCCCCChhHHHHH-----------hCEEEccCCCCCCHHHHHHHHH
Confidence 67788888889999987642 1000 00000 00000011 1289999999999999999999
Q ss_pred HHHHhhhh
Q 037063 561 FVSRFLDA 568 (588)
Q Consensus 561 ~l~~~l~~ 568 (588)
.|++++++
T Consensus 388 ~l~~~~~~ 395 (399)
T 2oga_A 388 AVREWAER 395 (399)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHH
Confidence 99998754
No 132
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.90 E-value=2.1e-21 Score=208.05 Aligned_cols=315 Identities=12% Similarity=0.032 Sum_probs=209.8
Q ss_pred hHHHHHHHHHHHHHhCCCCC-------CceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCE
Q 037063 178 SELESKIRKRIMDFMNISED-------DYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGAR 250 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~-------e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~ 250 (588)
.++.+.+.+.+++..|.+.+ ...|++|+|+++|+.+++.++ +++||+|++....+... ...++..|++
T Consensus 81 ~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~----~~~~~~~g~~ 155 (425)
T 2r2n_A 81 PELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMI-INPGDNVLLDEPAYSGT----LQSLHPLGCN 155 (425)
T ss_dssp HHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHH-CCTTCEEEEESSCCHHH----HHHHGGGTCE
T ss_pred HHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHh-CCCCCEEEEeCCCcHHH----HHHHHHcCCE
Confidence 35556666666666787652 146999999999999999999 89999977654443312 3456778999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhccc----cCCCcceEEEE-eCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCCC
Q 037063 251 VSSAEFAWPNLRIHSGKLMKKIVGKRKK----KKKKKRGLFVF-PLQSKVTGARYSYM---WM-SVAAEKGWHVLLDATA 321 (588)
Q Consensus 251 v~~v~~~~~~~~i~~e~l~~~i~~~~~~----~~~~~t~Lv~~-~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa~ 321 (588)
++.++.+ ++ .+++++|++++++.+.+ ...+++++|++ ++++|+||..+|.+ +| ++|+++|++||+|+++
T Consensus 156 ~~~v~~~-~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~ 233 (425)
T 2r2n_A 156 IINVASD-ES-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPY 233 (425)
T ss_dssp EEEECEE-TT-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred EEEeCcC-CC-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCc
Confidence 9999987 44 48999999998620000 01135778765 89999999999987 56 8899999999999996
Q ss_pred cC----CC---CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 322 LG----SK---DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 322 ~~----~~---d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
.. +. .+..+ .....++++.|++|.+| +..++|++++++++++.+......
T Consensus 234 ~~~~~~g~~~~~~~~~--~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~~-------------------- 290 (425)
T 2r2n_A 234 YFLQFNKFRVPTFLSM--DVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQV-------------------- 290 (425)
T ss_dssp GGGBSSSSCCCCTGGG--CTTSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHHT--------------------
T ss_pred ccccCCCCCCCCcccc--CCCCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHHH--------------------
Confidence 52 21 12222 22335789999999888 345689999999887766432211
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCC
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDHADA----LGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVM 469 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~----~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~ 469 (588)
..++.+.... .++..+|+.+.. --++++.++.+..++++.+.|.++ .+++ .+..|
T Consensus 291 ------~~~~~~~~~q---~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--------~~~~~~~~~p--- 350 (425)
T 2r2n_A 291 ------STLHPSTFNQ---LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKW--------LTGLAEWHVP--- 350 (425)
T ss_dssp ------TTCSSCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------CSSSEEECCC---
T ss_pred ------hcCCCCHHHH---HHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH--------CCCCeEEeCC---
Confidence 0112222221 333455544211 014666777788888888888873 2443 44444
Q ss_pred CCcccEEEEEeecCCCCCcCHHH-HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCC
Q 037063 470 FDRGPSLAFNVFDWNGTRIDPAL-VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGC 548 (588)
Q Consensus 470 ~~rg~iv~f~~~~~~g~~i~~~~-v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~ 548 (588)
..+.++.+.+.+. .+... +.+.|.++||.+++|..|.... ..+.++||+|++.
T Consensus 351 -~~g~~~~~~~~~~----~~~~~~~~~~l~~~gv~v~pg~~f~~~~---------------------~~~~~~iRis~~~ 404 (425)
T 2r2n_A 351 -AAGMFLWIKVKGI----NDVKELIEEKAVKMGVLMLPGNAFYVDS---------------------SAPSPYLRASFSS 404 (425)
T ss_dssp -SBSSEEEEEETTC----SCCHHHHHTHHHHTTEECEEGGGGSSST---------------------TSCCCEEEEECSS
T ss_pred -CceEEEEEEeCCC----CCHHHHHHHHHHHCCcEEechhhhcCCC---------------------CCCCCEEEEEeCC
Confidence 2345566666541 23334 5777888999999986653110 0122389999984
Q ss_pred CCCHHHHHHHHHHHHHhhhhh
Q 037063 549 LTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 549 ~~t~eDv~~li~~l~~~l~~~ 569 (588)
.+.+|++++++.|++++++.
T Consensus 405 -~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 405 -ASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp -CCHHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHHh
Confidence 59999999999999988653
No 133
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.90 E-value=2.7e-22 Score=214.16 Aligned_cols=311 Identities=9% Similarity=0.044 Sum_probs=207.0
Q ss_pred HHHHHHHHHHHHHhCCCCCC-ceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 179 ELESKIRKRIMDFMNISEDD-YTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e-~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
++.+.+.+.+.+.+|.+.+. ..|+||+|+|+|+.+++.++ +++||+|++ ...|++ . ...++..|++++.+++
T Consensus 71 ~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~~~~-~----~~~~~~~g~~~~~~~~ 144 (422)
T 3fvs_A 71 PLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQAL-VDEGDEVIIIEPFFDC-Y----EPMTMMAGGRPVFVSL 144 (422)
T ss_dssp HHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT-H----HHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHH-cCCCCEEEEcCCCchh-h----HHHHHHcCCEEEEEec
Confidence 44445555555555544332 35999999999999999998 899999664 445553 2 3455678999999998
Q ss_pred cC-----------CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCC
Q 037063 257 AW-----------PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATA 321 (588)
Q Consensus 257 ~~-----------~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~ 321 (588)
+. .+..+|+++|+++++ +++++|++++++|+||..+| +++| ++|+++|+++|+|+++
T Consensus 145 ~~~~~~~G~~~~~~~~~~d~~~l~~~~~--------~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 216 (422)
T 3fvs_A 145 KPGPIQNGELGSSSNWQLDPMELAGKFT--------SRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVY 216 (422)
T ss_dssp BCCCCCSSSCCBGGGSBCCHHHHHTTCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred ccccccccccccccCCCCCHHHHHhhcC--------CCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccc
Confidence 73 134689999998887 68999999999999999996 6667 8899999999999997
Q ss_pred cC----CC---CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 322 LG----SK---DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 322 ~~----~~---d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
.. +. .+..++ .....++++.|++|.+|.+..++|++++++++++.+......
T Consensus 217 ~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~-------------------- 275 (422)
T 3fvs_A 217 QWMVYDGHQHISIASLP-GMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQN-------------------- 275 (422)
T ss_dssp TTCBCTTCCCCCGGGST-TTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHHHHHHHHHHT--------------------
T ss_pred hhhccCCCCCCChhhcc-cccCcEEEEecchhccCCccceEEEEEeCHHHHHHHHHHHhh--------------------
Confidence 64 21 111221 112356899999999884234589999988877665432211
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHHH------HhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCC
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDHAD------ALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKV 468 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~l~------~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~ 468 (588)
...+.+.... +++..+|+... ...++++.++.+.+++++.+.|.++ +++++.|.
T Consensus 276 ------~~~~~~~~~~---~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~- 335 (422)
T 3fvs_A 276 ------SVFHCPTQSQ---AAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV----------GLKPIIPQ- 335 (422)
T ss_dssp ------TTCCCCHHHH---HHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT----------TCEEEBCS-
T ss_pred ------ccCCCCcHHH---HHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHc----------CCeecCCC-
Confidence 0011121111 34445554310 1126788899999999999999884 35655542
Q ss_pred CCCcccEEEEEeecCC-------C---CCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCC
Q 037063 469 MFDRGPSLAFNVFDWN-------G---TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSG 538 (588)
Q Consensus 469 ~~~rg~iv~f~~~~~~-------g---~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g 538 (588)
.+.++.+.+.... + +....+.+.++++++||.+.+|..|.... .. ..+
T Consensus 336 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~------------~~-------~~~ 393 (422)
T 3fvs_A 336 ---GSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVP------------HQ-------KHF 393 (422)
T ss_dssp ---BSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHH------------HH-------TTS
T ss_pred ---eeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCc------------CC-------CCC
Confidence 3445555543210 0 00012445567788899999997774210 00 023
Q ss_pred ccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 539 VSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 539 ~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.++||+|++. +.|||+++++.|++++++
T Consensus 394 ~~~iRis~~~--~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 394 DHYIRFCFVK--DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp CSEEEEECCC--CHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEecC--CHHHHHHHHHHHHHHHhh
Confidence 3499999886 999999999999988753
No 134
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.90 E-value=3.1e-22 Score=210.18 Aligned_cols=320 Identities=13% Similarity=0.157 Sum_probs=211.2
Q ss_pred CCeeeecCCCCC------CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGHG------LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~g------l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|+|.++.. ..++.+++++.+.+.. .+++. . .|. .....+
T Consensus 26 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~--~~~~~------------------------~--~y~---~~~~~~ 74 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEK--LLHVS------------------------N--LYE---NPWQEE 74 (375)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHH--CSCCC------------------------T--TBC---CHHHHH
T ss_pred CCCEEEEcCCcccccccCCCCHHHHHHHHHHHHh--ccccC------------------------c--ccC---CHHHHH
Confidence 567899988653 2678888887665532 11210 0 011 234568
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--C---CCC-CeEE-EcCCCchhHHHHHHHHHHh----cCCE--
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--F---YSN-PRLL-TVYDHENEAAALMIESSKK----RGAR-- 250 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--~---~~g-d~ll-~~~e~~s~~~~~~~~~a~~----~G~~-- 250 (588)
+|+.|++++|+ ++ .|++|+|+|+|+.+++.++. . ++| |+|+ ....|+.....+ ...... .|..
T Consensus 75 l~~~la~~~g~-~~--~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~-~~~~~~~~~~~~~~~~ 150 (375)
T 2eh6_A 75 LAHKLVKHFWT-EG--KVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGS-LSATGQPKFHKGFEPL 150 (375)
T ss_dssp HHHHHHHTSSS-CE--EEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHH-HHHCBCGGGTTTTCSC
T ss_pred HHHHHHhhcCC-CC--eEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhh-hhhcCCccccCCCCCC
Confidence 99999999998 33 49999999999999886421 3 678 8865 455666533322 111100 1221
Q ss_pred ---EEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCc
Q 037063 251 ---VSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATAL 322 (588)
Q Consensus 251 ---v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~ 322 (588)
+..++. .|+++|+++++ +++++|++++++|+||.+.| +++| ++|+++|+++|+|+++.
T Consensus 151 ~~~~~~~~~------~d~~~l~~~l~--------~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~ 216 (375)
T 2eh6_A 151 VPGFSYAKL------NDIDSVYKLLD--------EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQT 216 (375)
T ss_dssp CSSEEEECT------TCHHHHHTTCC--------TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred CCCceeCCC------chHHHHHHHhc--------CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecccc
Confidence 344332 47888888876 67999999999999999988 9999 99999999999999987
Q ss_pred -CCCCCCCCCCCCC--CCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccccccc
Q 037063 323 -GSKDMDTLGLSLF--KPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQ 399 (588)
Q Consensus 323 -~~~d~~~l~l~~~--~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f 399 (588)
++.....+.+..+ .+|++++| |.+|. +.|+|++++++++++.+.+...+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~d~~s~S--K~~~~-g~~~G~~~~~~~~~~~~~~~~~~~------------------------ 269 (375)
T 2eh6_A 217 GIGRTGEFYAYQHFNLKPDVIALA--KGLGG-GVPIGAILAREEVAQSFTPGSHGS------------------------ 269 (375)
T ss_dssp TTTTTSSSSGGGGGTCCCSEEEEC--GGGGT-TSCCEEEEEEHHHHTTCCTTSCCC------------------------
T ss_pred CCCCCCcchhhhhcCCCCCEEEEc--ccccC-CCCeEEEEEcHHHHhhhcCCCCCC------------------------
Confidence 4311111222222 28988555 97774 778999999998877666532210
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEE
Q 037063 400 SKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFN 479 (588)
Q Consensus 400 ~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~ 479 (588)
..++.++.. ++..++|+.+. .+.++++++++++.+.|.++ +...+ + ..+.++.+.
T Consensus 270 -~~~~~~~~~----~~~~~~l~~~~-----~~~~~~~~~~~~l~~~L~~~-------~~~~~----~----~~g~~~~~~ 324 (375)
T 2eh6_A 270 -TFGGNPLAC----RAGTVVVDEVE-----KLLPHVREVGNYFKEKLKEL-------GKGKV----K----GRGLMLGLE 324 (375)
T ss_dssp -SSTTCHHHH----HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHT-------TSSEE----E----EETTEEEEE
T ss_pred -CCCCCHHHH----HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH-------hcCCc----e----EEEEEEEEE
Confidence 112222221 22334555433 67888889999999999885 11111 1 245777777
Q ss_pred eecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHH
Q 037063 480 VFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLW 559 (588)
Q Consensus 480 ~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li 559 (588)
+.+ +...+.+.|.++||.++.+. . ..||+|+++.++.||+++++
T Consensus 325 ~~~------~~~~~~~~l~~~gi~~~~~~----------------------------~--~~iRi~~~~~~~~~~i~~~~ 368 (375)
T 2eh6_A 325 LER------ECKDYVLKALEKGLLINCTA----------------------------G--KVLRFLPPLIIQKEHIDRAI 368 (375)
T ss_dssp CSS------CCHHHHHHHHHTTEECEEET----------------------------T--TEEEECCCTTCCHHHHHHHH
T ss_pred EcC------cHHHHHHHHHHCCCEEecCC----------------------------C--CEEEEECCCCCCHHHHHHHH
Confidence 653 24556666667999987541 1 18999999999999999999
Q ss_pred HHHHHhh
Q 037063 560 AFVSRFL 566 (588)
Q Consensus 560 ~~l~~~l 566 (588)
+.|+++|
T Consensus 369 ~~l~~~l 375 (375)
T 2eh6_A 369 SVLREIL 375 (375)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9998764
No 135
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.90 E-value=5.7e-22 Score=206.40 Aligned_cols=286 Identities=11% Similarity=0.025 Sum_probs=195.3
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec-cCCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF-AWPN 260 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~-~~~~ 260 (588)
.++|+.+++++|+++++ |++|+|+|+|+.+++.++ . ||+|++....+... ...++..|++++.+++ + +.
T Consensus 53 ~~lr~~la~~~~~~~~~--i~~t~g~~~al~~~~~~l-~--gd~Vi~~~p~~~~~----~~~~~~~g~~~~~v~~~~-~~ 122 (350)
T 3fkd_A 53 GTLRQMLAKRNSVDNNA--ILVTNGPTAAFYQIAQAF-R--GSRSLIAIPSFAEY----EDACRMYEHEVCFYPSNE-DI 122 (350)
T ss_dssp HHHHHHHHHHTTCCGGG--EEEESHHHHHHHHHHHHT-T--TCEEEEEESCCHHH----HHHHHHTTCEEEEEETTS-CG
T ss_pred HHHHHHHHHHhCcCHHH--EEEcCCHHHHHHHHHHHH-C--CCEEEEeCCCcHHH----HHHHHHcCCeEEEEecCC-cc
Confidence 47999999999997665 999999999999999998 3 89976544333212 3556778999999998 5 32
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcC-cEEEEeCCCcCC-CC--CCCCCCCCC
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKG-WHVLLDATALGS-KD--MDTLGLSLF 335 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g-~~vvvDaa~~~~-~d--~~~l~l~~~ 335 (588)
..+++ +++++|++++++|+||.++|+++| ++++..+ .++|+|+++... .+ .....+...
T Consensus 123 ~~~~~----------------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~ 186 (350)
T 3fkd_A 123 GEADF----------------SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGR 186 (350)
T ss_dssp GGSCC----------------TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTC
T ss_pred ccCcc----------------CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcC
Confidence 22322 368899999999999999999999 8888875 799999996532 11 111122233
Q ss_pred CCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHH
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLV 415 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~a 415 (588)
..++++.|++|.+|.++.++|++++++++++.+...... .+.+.... ++
T Consensus 187 ~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~---~~ 235 (350)
T 3fkd_A 187 KNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTP----------------------------WAVNALAI---EA 235 (350)
T ss_dssp SSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCCT----------------------------TCSCHHHH---HH
T ss_pred CCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCCC----------------------------CCCCHHHH---HH
Confidence 466899999998884345689999988877766543311 01121111 22
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHH
Q 037063 416 ECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQK 495 (588)
Q Consensus 416 l~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~ 495 (588)
+..+|+....+ .+.+.++. .+++++.+.|.++ |+++++. ..+.++.+.+... +...+.+
T Consensus 236 ~~~~l~~~~~~-~~~~~~~~-~~~~~l~~~L~~~---------~~~~~~~-----~~~~~~~~~~~~~-----~~~~l~~ 294 (350)
T 3fkd_A 236 AKFILIHPAQF-TLPIRKWQ-RNTVDFITALNRL---------DGVEVHP-----SGTTFFLLRLKKG-----TAAELKK 294 (350)
T ss_dssp HHHHHHCTTTT-CCCHHHHH-HHHHHHHHHHHHS---------TTEEECC-----CSSSEEEEEESSS-----CHHHHHH
T ss_pred HHHHHhCHHHH-HHHHHHHH-HHHHHHHHHHhcC---------CCcEECC-----CCCcEEEEECCCC-----CHHHHHH
Confidence 33334322111 23344444 7888888888874 5677753 2456776777642 4667766
Q ss_pred HHHh-CCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhhhcc
Q 037063 496 LADR-HNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDADFVE 572 (588)
Q Consensus 496 ~l~~-~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~~~~ 572 (588)
.|.+ +||.+++|..|.. .+.++||+|++ +.+|+++++++|++++++.-..
T Consensus 295 ~L~~~~gi~v~~g~~f~~------------------------~~~~~iRis~~---~~~~~~~l~~al~~~~~~~~~~ 345 (350)
T 3fkd_A 295 YMLEEYNMLIRDASNFRG------------------------LDESYVRITTQ---RPAQNQLFIKALETFLEKYEGH 345 (350)
T ss_dssp HHHHTTCEECEECTTSTT------------------------CCTTEEEEECC---CHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHCCEEEEeCccCCC------------------------CCCCEEEEEcC---CHHHHHHHHHHHHHHHHHhccc
Confidence 6666 9999999876621 22239999987 8899999999999988765433
No 136
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.90 E-value=2.6e-21 Score=207.34 Aligned_cols=326 Identities=16% Similarity=0.087 Sum_probs=202.1
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEE-e
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSA-E 255 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v-~ 255 (588)
....+++|+++++++|++ + .++++++|+|+.+++.++ +++||+|+ ....|++....+ ..+++..|++++.+ +
T Consensus 57 ~~~~~~l~~~la~~~g~~---~-~v~~~sGt~A~~~~l~~~-~~~gd~vi~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~ 130 (421)
T 2ctz_A 57 NPTVDVLEKRLAALEGGK---A-ALATASGHAAQFLALTTL-AQAGDNIVSTPNLYGGTFNQF-KVTLKRLGIEVRFTSR 130 (421)
T ss_dssp CHHHHHHHHHHHHHHTCS---E-EEEESSHHHHHHHHHHHH-CCTTCEEEECSCCCHHHHHHH-HTHHHHTTCEEEECCT
T ss_pred ChHHHHHHHHHHHHhCCC---c-eEEecCHHHHHHHHHHHH-hCCCCEEEEeCCCchHHHHHH-HHHHHHcCCEEEEECC
Confidence 467789999999999985 2 345555699999999998 89999966 566777643333 44457789999998 6
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCC-cCCCCCCCCCCC
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATA-LGSKDMDTLGLS 333 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~-~~~~d~~~l~l~ 333 (588)
.+ ++++|+++|+ +++++|++++++|++|.+.|+++| ++|+++|+++|+|+++ ..+.....++
T Consensus 131 ~~------d~~~l~~~i~--------~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~~~~~-- 194 (421)
T 2ctz_A 131 EE------RPEEFLALTD--------EKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLLRPLA-- 194 (421)
T ss_dssp TC------CHHHHHHHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSCCGGG--
T ss_pred CC------CHHHHHHhhc--------cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccCCccc--
Confidence 53 7899999997 689999999999999999999999 9999999999999999 7774333332
Q ss_pred CCCCcEEEeccCccCCCCCC-ceEEEEEeC---cc----hhcccCCCCCCCceEeeecCCCcccccccccccccc---cC
Q 037063 334 LFKPDFLICSFYKIFGENPS-GFGCLFVKK---SS----ASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS---KF 402 (588)
Q Consensus 334 ~~~~D~vv~S~~K~~G~~P~-G~G~L~v~~---~~----~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~---e~ 402 (588)
..+|++++|+||++|. |. ++|++++.+ ++ ++.+.+...++.|....... ....+.. . .+|+ ..
T Consensus 195 -~~~Di~~~s~~K~l~~-~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~-~~~~~~~--~-~r~~~~~~~ 268 (421)
T 2ctz_A 195 -WGAALVTHSLTKWVGG-HGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAF-GELAFIV--K-ARVDGLRDQ 268 (421)
T ss_dssp -GTCSEEEEETTTTTTC-SSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHH-GGGHHHH--H-HHHTHHHHH
T ss_pred -cCCeEEEECCcccccC-CCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhc-chhHHHH--H-HHHHHHHhc
Confidence 3489999999998884 43 378888863 22 33455543332121100000 0000000 0 0221 11
Q ss_pred C-CCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeC-CCCC-----------
Q 037063 403 P-ESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYG-PKVM----------- 469 (588)
Q Consensus 403 G-T~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~-p~~~----------- 469 (588)
| ..+.... +....+++. +....++..++++++.+.|.++ |+++++. |...
T Consensus 269 g~~~~~~~a---~~~~~~l~~-----l~~r~~~~~~~a~~l~~~L~~~---------p~v~~v~~p~~~~~~~~~~~~~~ 331 (421)
T 2ctz_A 269 GQALGPFEA---WVVLLGMET-----LSLRAERHVENTLHLAHWLLEQ---------PQVAWVNYPGLPHHPHHDRAQKY 331 (421)
T ss_dssp CCCCCHHHH---HHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTC---------TTEEEEECTTSTTCTTHHHHHHH
T ss_pred CCCCCHHHH---HHHHcCcch-----HHHHHHHHHHhHHHHHHHHHhC---------CCeeEEECCCCCCCCCHHHHHHh
Confidence 2 1111110 111223332 2334455557899999999873 6777653 4311
Q ss_pred --CCcccEEEEEeecCCCCCcCHHHHHHHHHhCC---cEeccccccCcccc---cchHHHHHHHHhhhcCCCCCcCCc--
Q 037063 470 --FDRGPSLAFNVFDWNGTRIDPALVQKLADRHN---ISLSCGFLQNIFFS---GEYEQERVRVLETRSGTNETRSGV-- 539 (588)
Q Consensus 470 --~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~g---I~v~~G~~c~~~~~---~~~~~~~~~~l~~~~~~~~~~~g~-- 539 (588)
..++++++|++.+ . ...+.+++++.+ |.++.|..|..... ............. .|.
T Consensus 332 ~~~~~g~ivsf~l~~-----~-~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~--------~g~~~ 397 (421)
T 2ctz_A 332 FKGKPGAVLTFGLKG-----G-YEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQ--------AGVSP 397 (421)
T ss_dssp HTTCCCSEEEEEETT-----H-HHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHH--------HTCCT
T ss_pred ccCCCceEEEEEeCC-----C-HHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHh--------cCCCC
Confidence 2468999999865 1 345566666654 45666643321100 0000000000111 222
Q ss_pred cEEEEecCCCCCHHHHHHHHHHHHHhh
Q 037063 540 SVVTAALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 540 ~~vRvSlg~~~t~eDv~~li~~l~~~l 566 (588)
+.||+|+|. ||++.+++.|.+.|
T Consensus 398 ~~vRlS~g~----e~~~~li~~l~~al 420 (421)
T 2ctz_A 398 EMVRLSVGL----EHVEDLKAELKEAL 420 (421)
T ss_dssp TEEEEECCS----SCHHHHHHHHHHHT
T ss_pred CeEEEEeCC----CCHHHHHHHHHHHh
Confidence 399999997 57777777776655
No 137
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.90 E-value=1.6e-22 Score=209.51 Aligned_cols=310 Identities=13% Similarity=0.128 Sum_probs=211.5
Q ss_pred CCeeeecCCCCC-CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHG-LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRI 188 (588)
Q Consensus 110 ~~~vyLD~a~~g-l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~i 188 (588)
++.+|||++... ..|+.+++++.+.+... + . ..|+.. ...++|+.|
T Consensus 19 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~-~---------------------------~~y~~~---~~~~lr~~l 65 (335)
T 1uu1_A 19 RDKTYLALNENPFPFPEDLVDEVFRRLNSD--A-L---------------------------RIYYDS---PDEELIEKI 65 (335)
T ss_dssp CCSEEESSCCCSSCCCHHHHHHHHHTCCGG--G-G---------------------------GSCCCS---SCHHHHHHH
T ss_pred CcceECCCCCCCCCCCHHHHHHHHHHhhhh--h-h---------------------------hcCCCC---chHHHHHHH
Confidence 357999998875 36788888876554210 0 0 001110 145899999
Q ss_pred HHHhC---CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCH
Q 037063 189 MDFMN---ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHS 265 (588)
Q Consensus 189 a~~lg---a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~ 265 (588)
+++++ +++++ |++|+|+|+|+.+++.++ ||+|++. ..+... ...++..|++++.++.+ +++.+|+
T Consensus 66 a~~~~~~~~~~~~--v~~~~G~~~al~~~~~~~----gd~Vl~~-p~y~~~----~~~~~~~g~~~~~v~~~-~~~~~d~ 133 (335)
T 1uu1_A 66 LSYLDTDFLSKNN--VSVGNGADEIIYVMMLMF----DRSVFFP-PTYSCY----RIFAKAVGAKFLEVPLT-KDLRIPE 133 (335)
T ss_dssp HHHHTCSSCCGGG--EEEESSHHHHHHHHHHHS----SEEEECS-SSCHHH----HHHHHHHTCEEEECCCC-TTSCCCC
T ss_pred HHHcCCCCCCHHH--EEEcCChHHHHHHHHHHh----CCcEEEC-CCcHHH----HHHHHHcCCeEEEeccC-CCCCCCH
Confidence 99999 77654 999999999999999997 8887766 443312 34556779999999886 4556776
Q ss_pred HHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCC-CCCCCCcEEEec
Q 037063 266 GKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLG-LSLFKPDFLICS 343 (588)
Q Consensus 266 e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~-l~~~~~D~vv~S 343 (588)
++| . ++++|++++++|+||..+|.+++ ++++..| ++|+|+++.....-..+. +...+.++++.|
T Consensus 134 ~~l----~---------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s 199 (335)
T 1uu1_A 134 VNV----G---------EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRT 199 (335)
T ss_dssp CCC----C---------TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEE
T ss_pred HHc----C---------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEec
Confidence 655 2 57999999999999999999999 8888888 899999976310001111 122346899999
Q ss_pred cCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHH
Q 037063 344 FYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHA 423 (588)
Q Consensus 344 ~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l 423 (588)
++|.+|.++.++|++++++++++.+...... .+.+.... +++.++|+..
T Consensus 200 ~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~----------------------------~~~~~~~~---~~~~~~l~~~ 248 (335)
T 1uu1_A 200 FSKAFSLAAQRVGYVVASEKFIDAYNRVRLP----------------------------FNVSYVSQ---MFAKVALDHR 248 (335)
T ss_dssp STTTTTCGGGCCEEEEECHHHHHHHHHHSCT----------------------------TCSCHHHH---HHHHHHHHTH
T ss_pred chhhcCCcccCeEEEEeCHHHHHHHHHhcCC----------------------------CCcCHHHH---HHHHHHhCCH
Confidence 9999983222379999988877665432110 01222221 3444555542
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcE
Q 037063 424 DALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNIS 503 (588)
Q Consensus 424 ~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~ 503 (588)
+ .++++.++.+++++++.+.|.++ | ++++ | ..+.++.+.+.+ .+...+.+.|.++||.
T Consensus 249 ~--~~~~~~~~~~~~~~~l~~~L~~~-------g---~~~~-~----~~~~~~~~~~~~-----~~~~~~~~~l~~~gi~ 306 (335)
T 1uu1_A 249 E--IFEERTKFIVEERERMKSALREM-------G---YRIT-D----SRGNFVFVFMEK-----EEKERLLEHLRTKNVA 306 (335)
T ss_dssp H--HHHHHHHHHHHHHHHHHHHHHHH-------T---CCBC-C----CCSSEEEEECCT-----HHHHHHHHHHHHHTEE
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHC-------C---cEEc-C----CCCeEEEEECCC-----CCHHHHHHHHHHCCEE
Confidence 2 25778888899999999999875 2 2333 2 235666666543 3355666667778999
Q ss_pred eccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHh
Q 037063 504 LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 504 v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~ 565 (588)
++.+ .+ ++|+|++ +.+|++++++.|+++
T Consensus 307 v~~~-----------------------------~~--~iRis~~---~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 307 VRSF-----------------------------RE--GVRITIG---KREENDMILRELEVF 334 (335)
T ss_dssp EEEE-----------------------------TT--EEEEECC---CHHHHHHHHHHHHCC
T ss_pred EEEC-----------------------------CC--eEEEEeC---CHHHHHHHHHHHHhh
Confidence 8762 22 8999986 578999999998764
No 138
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.90 E-value=6.3e-22 Score=215.16 Aligned_cols=359 Identities=11% Similarity=0.053 Sum_probs=219.5
Q ss_pred CCCCCCCHHHHHHhhhhcccCc-CCCCCCCCCCCCCCCCCcccccccccccccccccCCc--hhHHHHHHHHHHHHHhCC
Q 037063 118 IGHGLFSYSQMHSCSSNVHSSA-ASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSE--ESELESKIRKRIMDFMNI 194 (588)
Q Consensus 118 a~~gl~~~~~~~~~~~~~~~~~-~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~--~~~~~~~~r~~ia~~lga 194 (588)
++-.+.|+.|++++...+.... .++| .++. |++. ..++++.+|+++++++|+
T Consensus 61 as~n~~~~~V~eA~~~~l~~~y~~G~~------------------------g~r~-~~G~~~~~~lE~~a~~~~a~l~g~ 115 (490)
T 2a7v_A 61 ASENFCSRAALEALGSCLNNKYSEGYP------------------------GKRY-YGGAEVVDEIELLCQRRALEAFDL 115 (490)
T ss_dssp TTCCCCCHHHHHHHTSGGGTCCCCC-------------------------------------CTHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHHHcCCCccCCC------------------------cccc-cCccHHHHHHHHHHHHHHHHHcCC
Confidence 6777889999999876654321 2444 2221 2222 146667899999999999
Q ss_pred CCCCc-eEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHH-HH--HHHHhcCCE--EEEEeccCCCCccCHHH
Q 037063 195 SEDDY-TLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAAL-MI--ESSKKRGAR--VSSAEFAWPNLRIHSGK 267 (588)
Q Consensus 195 ~~~e~-~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~-~~--~~a~~~G~~--v~~v~~~~~~~~i~~e~ 267 (588)
+.+++ ..|++.|+|+|+.+++.++ +++||+|++ ...|.+....+ +. ..+...|.. ++.++++..++.+|.++
T Consensus 116 ~~~~~~~~v~~~sGt~An~~al~al-~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~ 194 (490)
T 2a7v_A 116 DPAQWGVNVQPYSGSPANLAVYTAL-LQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQ 194 (490)
T ss_dssp CTTTEEEECCCSSHHHHHHHHHHHH-CCSCEECCC-------------------------------CCBCTTTCSBCHHH
T ss_pred CcccCceEEeCCchHHHHHHHHHHH-cCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHH
Confidence 86544 4577778999999999999 999999764 44443211111 00 011223443 44455555578999999
Q ss_pred HHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC-----CCCCCCCCCCCCCcEEE
Q 037063 268 LMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS-----KDMDTLGLSLFKPDFLI 341 (588)
Q Consensus 268 l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~-----~d~~~l~l~~~~~D~vv 341 (588)
|++++.. .++++|++...+| |...|+++| ++|+++|+++++|++|..+ ....+++ .+|+++
T Consensus 195 le~~l~~-------~~~klIi~~~s~~--~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~----~aDiv~ 261 (490)
T 2a7v_A 195 LALTARL-------FRPRLIIAGTSAY--ARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK----HADIVT 261 (490)
T ss_dssp HHHHHHH-------HCCSEEEECCSSC--CSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG----TCSEEE
T ss_pred HHHHHhh-------cCCcEEEEcCCCC--CCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC----CCCEEE
Confidence 9999962 3578888876554 567899999 9999999999999998643 1112221 389999
Q ss_pred eccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccc-cCCCCCccchhhHHHHHHHH
Q 037063 342 CSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS-KFPESSISGVSSKLVECKGL 420 (588)
Q Consensus 342 ~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~-e~GT~~~~~~~~~~al~~aL 420 (588)
+|+||.|+. |.| |+++.++++.. +.+. . +...... .. ..+.. ..|. ..|+++...+ +++..|+
T Consensus 262 ~S~hK~l~G-p~G-G~i~~~~~~~~-~~~~-~---~~~~~~~-l~--~~i~~---~~~~g~qggp~~~~i---aAla~Al 325 (490)
T 2a7v_A 262 TTTHKTLRG-ARS-GLIFYRKGVKA-VDPK-T---GREIPYT-FE--DRINF---AVFPSLQGGPHNHAI---AAVAVAL 325 (490)
T ss_dssp EESSGGGCS-CSC-EEEEEECSEEE-EETT-T---EEEEECC-CH--HHHHH---HHTTTTCCSCCHHHH---HHHHHHH
T ss_pred ECCcccCcc-ccc-hheeeccchhc-cccc-c---cchhhHH-HH--HHHHH---HhcccCCCCchHHHH---HHHHHHH
Confidence 999996642 877 99999886421 1100 0 0000000 00 00000 0110 2355655554 6667777
Q ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhC
Q 037063 421 DHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRH 500 (588)
Q Consensus 421 ~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~ 500 (588)
..+..-+++...+++..++++|.+.|.++ ++++..+. ....++.+.+.+. | ++...+.+.|++.
T Consensus 326 ~~~~~~~~~~~~~~~~~na~~L~~~L~~~----------G~~v~~~~---t~t~lv~vdl~~~-g--~~~~~~~~~L~~~ 389 (490)
T 2a7v_A 326 KQACTPMFREYSLQVLKNARAMADALLER----------GYSLVSGG---TDNHLVLVDLRPK-G--LDGARAERVLELV 389 (490)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHHT----------TCEEGGGS---CSSSEEEEECTTT-T--CCHHHHHHHHHHT
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHc----------CcEEecCC---CCCeEEEEEeCCC-C--CCHHHHHHHHHhC
Confidence 76643235778889999999999999984 45665421 2346777776542 2 5678889999999
Q ss_pred CcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCC----CCCHHHHHHHHHHHHHhhhh
Q 037063 501 NISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGC----LTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 501 gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~----~~t~eDv~~li~~l~~~l~~ 568 (588)
||.+..+.... .. .....+.||++... -.+++|+++++++|.+.++.
T Consensus 390 GI~v~~~~~p~--d~-------------------~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 390 SITANKNTCPG--DR-------------------SAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp TEECEEECCTT--CC-------------------CSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCccCC--CC-------------------CCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 99987652211 00 01222389997633 35899999999999998863
No 139
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.90 E-value=9.4e-22 Score=206.56 Aligned_cols=294 Identities=12% Similarity=-0.016 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCC--CCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYS--NPRLLTV-YDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~--gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
++.+++.+.+.+.+|++.+...|+||+|+|+|+.+++.++ .++ ||+|++. ..|++ . ...++..|++++.++
T Consensus 63 ~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~-~~~~~gd~vl~~~p~~~~-~----~~~~~~~g~~~~~~~ 136 (376)
T 3ezs_A 63 SLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFV-LFDYQNPTIAYPNPFYQI-Y----EGAAKFIKAKSLLMP 136 (376)
T ss_dssp HHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHH-TTTCSSCEEEEEESCCTH-H----HHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHH-cCCCCCCEEEEecCCcHh-H----HHHHHHcCCEEEEcc
Confidence 4444555555555587323345999999999999999998 788 9997654 44543 2 345677899999999
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcCCC-CCCCC
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALGSK-DMDTL 330 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~~~-d~~~l 330 (588)
.+ ++..+++ ++++.+. +++++|++++++|+||..+|.++ | ++|+++|+++|+|+++.... +-...
T Consensus 137 ~~-~~~~~~~-~l~~~~~--------~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 206 (376)
T 3ezs_A 137 LT-KENDFTP-SLNEKEL--------QEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPP 206 (376)
T ss_dssp CC-GGGTSCC-CCCHHHH--------HHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCC
T ss_pred cC-CCCCcch-hHHhhhc--------cCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCC
Confidence 87 3333444 6777776 57899999999999999999666 4 66899999999999976521 00111
Q ss_pred CC---------CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccccccccc
Q 037063 331 GL---------SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSK 401 (588)
Q Consensus 331 ~l---------~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e 401 (588)
.+ .....++++.|++|.+|.++.++|+++.++++++.+...... .
T Consensus 207 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~--------------------------~ 260 (376)
T 3ezs_A 207 SLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRAY--------------------------L 260 (376)
T ss_dssp CHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHTT--------------------------T
T ss_pred CHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHHHHhh--------------------------h
Confidence 11 024478999999999984345589999988877666432211 0
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEee
Q 037063 402 FPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVF 481 (588)
Q Consensus 402 ~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~ 481 (588)
..+.+.... +++..+++..+. ++++.++.+.+++++.+.|..+ . .| ..+.++.+.+.
T Consensus 261 ~~~~~~~~~---~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~------------~--~~----~~~~~~~~~~~ 317 (376)
T 3ezs_A 261 GYTSANAIQ---KASEAAWLDDRH--AEFFRNIYANNLKLARKIFKNT------------L--IY----PYSFYVYLPVQ 317 (376)
T ss_dssp CCCCCHHHH---HHHHHHHHCSHH--HHHHHHHHHHHHHHHHHHSTTC------------C--CC----SBSSEEEEECS
T ss_pred cCCCChHHH---HHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHhcCC------------C--CC----CcceEEEEECC
Confidence 112222221 344455543221 5677777777777777766421 1 11 23455555554
Q ss_pred cCCCCCcCHHHHHHHHH-hCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 482 DWNGTRIDPALVQKLAD-RHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 482 ~~~g~~i~~~~v~~~l~-~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
+...+.+.|. ++||.+++|..|... ..+..+||+|++. +.|||+++++
T Consensus 318 -------~~~~~~~~l~~~~gi~v~~g~~~~~~----------------------~~~~~~iRis~~~--~~~~i~~~l~ 366 (376)
T 3ezs_A 318 -------NGENFAKTLYQNEGIITLPALYLGRN----------------------RIGADYVRLALVY--DTPLLEKPLE 366 (376)
T ss_dssp -------CHHHHHHHHHHHHCCBCEEGGGGCST----------------------TTTTTEEEEECCS--CHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCCEEEeCcHHhCCC----------------------CCCCCeEEEEEcC--CHHHHHHHHH
Confidence 2555555554 489999998776421 0122399999874 9999999999
Q ss_pred HHHHhhhh
Q 037063 561 FVSRFLDA 568 (588)
Q Consensus 561 ~l~~~l~~ 568 (588)
.|++++++
T Consensus 367 ~l~~~l~~ 374 (376)
T 3ezs_A 367 IIETYREN 374 (376)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHHh
Confidence 99998764
No 140
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.90 E-value=7.6e-22 Score=208.71 Aligned_cols=324 Identities=10% Similarity=0.088 Sum_probs=218.0
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+.-|||+++. |..++.+.+++.+.+.....+. ... ..+..++
T Consensus 34 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-----------------------~~~--------~~~~~~~ 82 (392)
T 3ruy_A 34 EGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTS-----------------------RAF--------HSDQLGP 82 (392)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCC-----------------------TTS--------EETTHHH
T ss_pred CCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccc-----------------------ccc--------CCHHHHH
Confidence 56789998863 3357888888866653211100 000 1344678
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC---------C-CCeEE-EcCCCchhHHHHHHHHHHhc-----
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY---------S-NPRLL-TVYDHENEAAALMIESSKKR----- 247 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~---------~-gd~ll-~~~e~~s~~~~~~~~~a~~~----- 247 (588)
+++++++++|. + .++||+|+|+|+.+++..+ .. + +++|+ ....||+..... .......
T Consensus 83 l~~~la~~~g~--~--~v~~~~~gt~a~~~al~~~-~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~~~ 156 (392)
T 3ruy_A 83 WYEKVAKLTNK--E--MVLPMNTGAEAVETAIKTA-RRWAYDVKKVEANRAEIIVCEDNFHGRTMGA-VSMSSNEEYKRG 156 (392)
T ss_dssp HHHHHHHHHTC--S--EEEEESSHHHHHHHHHHHH-HHHHHHTSCCCTTCCEEEEETTCCCCSSHHH-HHTCSCTTTTTT
T ss_pred HHHHHHHhcCC--C--EEEEeCcHHHHHHHHHHHH-HHhhhhccCCCCCCcEEEEEcCCcCCCCHhh-hhccCChhhccc
Confidence 99999999983 3 4999999999999988865 32 2 55765 466666533222 1110000
Q ss_pred ----CCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEe
Q 037063 248 ----GARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLD 318 (588)
Q Consensus 248 ----G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvD 318 (588)
...+..++.+ |+++|+++|+ +++++|++.+++|+||.++| +++| ++|+++|+++|+|
T Consensus 157 ~~~~~~~~~~~~~~------d~~~l~~~l~--------~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~D 222 (392)
T 3ruy_A 157 FGPMLPGIIVIPYG------DLEALKAAIT--------PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVAD 222 (392)
T ss_dssp CCSCCSSEEEECTT------CHHHHHHHCC--------TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEE
T ss_pred cCCCCCCCeeeCcc------cHHHHHHHhc--------cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 1124444432 7899999987 78999999999999999999 9999 9999999999999
Q ss_pred CCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCC-CceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 319 ATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENP-SGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 319 aa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P-~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
+++. ++.. ....+.....+|++++| |.++. . ..+|++++++++++.+.+...+. .
T Consensus 223 e~~~~~~~~g~~~~~~~~~~~~d~~~~S--K~l~g-G~~~~G~~~~~~~~~~~~~~~~~~~--~---------------- 281 (392)
T 3ruy_A 223 EIQTGLGRTGKVFACDWDNVTPDMYILG--KALGG-GVFPISCAAANRDILGVFEPGSHGS--T---------------- 281 (392)
T ss_dssp CTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGT-TTSCCEEEEECHHHHTTCCTTSSCC--S----------------
T ss_pred echhCCCccccchhhhccCCCCCEEEEc--hhhhC-ChhhhEEEEECHHHHhhhccCCcCC--C----------------
Confidence 9984 2211 11111112347887665 97661 1 45899999998877665543221 0
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
| +.+.... +++..+|+.+.. +++.++.+.+++++.+.|.++. .+.+.... ..+.
T Consensus 282 ----~----~~~~~~~---~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~-------~~~~~~~~-----~~g~ 335 (392)
T 3ruy_A 282 ----F----GGNPLAC---AVSIAALEVLEE---EKLTERSLQLGEKLVGQLKEID-------NPMITEVR-----GKGL 335 (392)
T ss_dssp ----S----TTCHHHH---HHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTCC-------CTTEEEEE-----EETT
T ss_pred ----C----CCCHHHH---HHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHhc-------CCCceEEE-----eeee
Confidence 0 1222222 455566766544 6788899999999999999862 23444332 2467
Q ss_pred EEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHH
Q 037063 475 SLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFED 554 (588)
Q Consensus 475 iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eD 554 (588)
++.+.+.+ +...+.+.|.++||.+++|. . ..||+++++.++.||
T Consensus 336 ~~~~~~~~------~~~~l~~~l~~~gi~v~~~~----------------------------~--~~iRi~~~~~~~~~~ 379 (392)
T 3ruy_A 336 FIGIELNE------PARPYCEQLKAAGLLCKETH----------------------------E--NVIRIAPPLVISEED 379 (392)
T ss_dssp EEEEEESS------CSHHHHHHHHTTTEECCCBT----------------------------T--TEEEECCCTTCCHHH
T ss_pred EEEEEEcc------hHHHHHHHHHHCCcEEecCC----------------------------C--CEEEEECCCCCCHHH
Confidence 88888654 35667777778999988651 1 289999999999999
Q ss_pred HHHHHHHHHHhhh
Q 037063 555 TYRLWAFVSRFLD 567 (588)
Q Consensus 555 v~~li~~l~~~l~ 567 (588)
++++++.|+++++
T Consensus 380 i~~~~~~l~~~l~ 392 (392)
T 3ruy_A 380 LEWAFQKIKAVLS 392 (392)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998763
No 141
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.90 E-value=1.7e-22 Score=217.44 Aligned_cols=316 Identities=10% Similarity=0.022 Sum_probs=201.0
Q ss_pred HHHHHHHHHHh------CCCCCCceEEEecCHHHHHHHHHHhCCCCCCC--------------eEEE--cCCCchhHHHH
Q 037063 182 SKIRKRIMDFM------NISEDDYTLVFTANQSSAFKLLAESYPFYSNP--------------RLLT--VYDHENEAAAL 239 (588)
Q Consensus 182 ~~~r~~ia~~l------ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd--------------~ll~--~~e~~s~~~~~ 239 (588)
.++|+.|++++ ++++++ |+||+|+|+|+++++.++ .++|| +|++ ...|+. ....
T Consensus 86 ~~lr~~ia~~l~~~~g~~~~~~~--i~~t~G~t~al~~~~~~l-~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~-~~~~ 161 (444)
T 3if2_A 86 SAFIDALVGFFNRHYDWNLTSEN--IALTNGSQNAFFYLFNLF-GGAFVNEHSQDKESKSVDKSILLPLTPEYIG-YSDV 161 (444)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGG--EEEESSHHHHHHHHHHHS-SEEEECC-------CEEEEEEEESSSSCCGG-GTTC
T ss_pred HHHHHHHHHHHHhhcCCCCCHHH--EEEecCcHHHHHHHHHHH-hCCCccccccccccccccceEEEeCCCCccc-hhhc
Confidence 46777777776 555554 999999999999999999 88887 6654 344543 1110
Q ss_pred H--HHHHHhcCCEEEEEeccCCCC----ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHH
Q 037063 240 M--IESSKKRGARVSSAEFAWPNL----RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAA 309 (588)
Q Consensus 240 ~--~~~a~~~G~~v~~v~~~~~~~----~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~ 309 (588)
+ .......|..+..++++.+++ .+|+++|++++.. ..+++++|++++++|+||.++| +++| ++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~-----~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~ 236 (444)
T 3if2_A 162 HVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPAL-----KEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAK 236 (444)
T ss_dssp CSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHH-----HTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred ccccchhhccCceEEecccccccCccccCCCHHHHHHHHHh-----cCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHH
Confidence 0 001245688888888763233 6899999988420 0168999999999999999999 6667 8899
Q ss_pred HcCcEEEEeCCCcCCCC---CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCC
Q 037063 310 EKGWHVLLDATALGSKD---MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFS 386 (588)
Q Consensus 310 ~~g~~vvvDaa~~~~~d---~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~ 386 (588)
++|+++|+|+++..+.. ...........++++.|++|+ +.++.++|++++++++++.+.......
T Consensus 237 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~~~~----------- 304 (444)
T 3if2_A 237 RYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI-GLPGMRTGIIVADAKVIEAVSAMNAVV----------- 304 (444)
T ss_dssp HTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT-TCGGGCCEEEECCHHHHHHHHHHHHHH-----------
T ss_pred HCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhc-cCCCCceEEEEECHHHHHHHHHHHHhc-----------
Confidence 99999999999764311 111111223478999999996 532456899988887776654322110
Q ss_pred cccccccccccccccCCCCCccchhhHHHHHHHHHH---HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC--eE
Q 037063 387 EIIELETLDESSQSKFPESSISGVSSKLVECKGLDH---ADALGLILISNRARYLINWLANALMNLHHPHSETGIP--LV 461 (588)
Q Consensus 387 ~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~---l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~--~v 461 (588)
.. +.+.... +++...++. ...+ .+.+.++.+...+.+.+.|.+. .+ ++
T Consensus 305 --------------~~-~~~~~~~---~a~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~--------l~~~~~ 357 (444)
T 3if2_A 305 --------------NL-APTRFGA---AIATPLVANDRIKQLS-DNEIKPFYQKQATLAVKLLKQA--------LGDYPL 357 (444)
T ss_dssp --------------HS-SCCCHHH---HHHHHHHHTSHHHHHH-HHTHHHHHHHHHHHHHHHHHHH--------SSSSSE
T ss_pred --------------cC-CCChHHH---HHHHHHHHcCchhHHH-HHHHHHHHHHHHHHHHHHHHHh--------cccCCc
Confidence 00 1111111 222222321 1110 1124445555666666666552 12 36
Q ss_pred EEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccE
Q 037063 462 RIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSV 541 (588)
Q Consensus 462 ~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~ 541 (588)
.++.| ..+.++.+.+... .++...+.+.|.++||.+++|..|..+..... ...+.+.
T Consensus 358 ~~~~~----~~g~~~~~~~~~~---~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~----------------~~~~~~~ 414 (444)
T 3if2_A 358 MIHKP----EGAIFLWLWFKDL---PISTLDLYERLKAKGTLIVPSEYFFPGVDVSD----------------YQHAHEC 414 (444)
T ss_dssp EEECC----CBSSEEEEEETTC---SSCHHHHHHHHHHTTEECEEGGGSCTTCCCTT----------------CSGGGSE
T ss_pred eEecC----CccEEEEEEcCCC---CCCHHHHHHHHHHCCeEEecchhhcCCCCCcc----------------cccCCCe
Confidence 66655 2355666666531 15677888888899999999988753211100 0011238
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHhhhhhh
Q 037063 542 VTAALGCLTNFEDTYRLWAFVSRFLDADF 570 (588)
Q Consensus 542 vRvSlg~~~t~eDv~~li~~l~~~l~~~~ 570 (588)
||+|++. +.|||+++++.|++++++.+
T Consensus 415 iRis~~~--~~e~i~~~l~~l~~~~~~~~ 441 (444)
T 3if2_A 415 IRMSIAA--DEQTLIDGIKVIGEVVRELY 441 (444)
T ss_dssp EEEESSS--CHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeC--CHHHHHHHHHHHHHHHHHHH
Confidence 9999997 99999999999999887654
No 142
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.90 E-value=4.3e-22 Score=211.65 Aligned_cols=343 Identities=9% Similarity=-0.034 Sum_probs=220.7
Q ss_pred CCeeeecCCCCC-CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHG-LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRI 188 (588)
Q Consensus 110 ~~~vyLD~a~~g-l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~i 188 (588)
.+.++|+.+... +.|+.+.+++.+.+..... + .|+.. .-..++|+.+
T Consensus 23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~-~-----------------------------~y~~~--~g~~~l~~~l 70 (410)
T 3e2y_A 23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDNM-N-----------------------------QYTRG--FGHPALVKAL 70 (410)
T ss_dssp TTSEECSSCCCCSCCCHHHHHHHHHHHTCGGG-G-----------------------------SCCCT--TCCHHHHHHH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCccc-c-----------------------------CCCCC--CChHHHHHHH
Confidence 567899988876 3567777877655432100 0 01100 0012455555
Q ss_pred HHHhC------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEeccC---
Q 037063 189 MDFMN------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEFAW--- 258 (588)
Q Consensus 189 a~~lg------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~~~--- 258 (588)
+++++ ++++ ..|++|+|+++|+.+++.++ +++||+|++. ..|+. . ...++..|++++.++++.
T Consensus 71 a~~~~~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~~~~-~----~~~~~~~g~~~~~~~~~~~~~ 143 (410)
T 3e2y_A 71 SCLYGKIYQRQIDPN-EEILVAVGAYGSLFNSIQGL-VDPGDEVIIMVPFYDC-Y----EPMVRMAGAVPVFIPLRSKPT 143 (410)
T ss_dssp HHHHHHHHTSCCCTT-TSEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT-H----HHHHHHTTCEEEEEECEECCC
T ss_pred HHHHHHHhCCCCCCC-CCEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCchh-h----HHHHHHcCCEEEEEecccccc
Confidence 55554 4441 34999999999999999999 8999996654 44443 2 344567899999998862
Q ss_pred -------CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCC---
Q 037063 259 -------PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGS--- 324 (588)
Q Consensus 259 -------~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~--- 324 (588)
.++.+++++|+++++ +++++|++++++|+||..+| +++| ++|+++|+++|+|+++...
T Consensus 144 ~g~~~~~~~~~~d~~~l~~~~~--------~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~ 215 (410)
T 3e2y_A 144 DGMKWTSSDWTFDPRELESKFS--------SKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYT 215 (410)
T ss_dssp CSSCCBGGGEECCHHHHHTTCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT
T ss_pred ccccccccCCcCCHHHHHhhcC--------CCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccC
Confidence 245689999998887 68999999999999999985 5556 8899999999999997541
Q ss_pred -C---CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccc
Q 037063 325 -K---DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS 400 (588)
Q Consensus 325 -~---d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~ 400 (588)
. .+..++ .....++++.|++|.+|.+..++|++++++++++.+......
T Consensus 216 ~~~~~~~~~~~-~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~-------------------------- 268 (410)
T 3e2y_A 216 GHTHVKIATLP-GMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQN-------------------------- 268 (410)
T ss_dssp TCCCCCGGGST-TCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHHHHHHHHHT--------------------------
T ss_pred CCCCCCHHHcC-CccCeEEEEecchhhcCCCCceEEEEEECHHHHHHHHHHHHh--------------------------
Confidence 1 111121 112245889999999983234589999998887765432211
Q ss_pred cCCCCCccchhhHHHHHHHHHHH------HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 401 KFPESSISGVSSKLVECKGLDHA------DALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 401 e~GT~~~~~~~~~~al~~aL~~l------~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
...+.+.... +++..+|+.. ....++++.++.+.+++++.+.|.++ +++++.|. .+.
T Consensus 269 ~~~~~~~~~~---~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~----~~~ 331 (410)
T 3e2y_A 269 SFYTCATPLQ---AALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV----------GLKPIVPD----GGY 331 (410)
T ss_dssp TTCCCCHHHH---HHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT----------TCEEEBCS----BSS
T ss_pred hccCCChHHH---HHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC----------CCeecCCC----ccE
Confidence 0011111111 3333444420 01126788888899999999999874 35555542 344
Q ss_pred EEEEEeecCCCCCcC---------HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEe
Q 037063 475 SLAFNVFDWNGTRID---------PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAA 545 (588)
Q Consensus 475 iv~f~~~~~~g~~i~---------~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvS 545 (588)
++.+.+..... .++ .+.+.++++++||.+.+|..|...... ..+.++||+|
T Consensus 332 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~-------------------~~~~~~iRis 391 (410)
T 3e2y_A 332 FIIADVSSLGA-DLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSK-------------------PHFEKLVRFC 391 (410)
T ss_dssp EEEEECGGGCC-CCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTH-------------------HHHTTEEEEE
T ss_pred EEEEEchhhhc-ccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCC-------------------CCCCCEEEEE
Confidence 55555543111 111 144566788899999998776421000 0112399999
Q ss_pred cCCCCCHHHHHHHHHHHHHh
Q 037063 546 LGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 546 lg~~~t~eDv~~li~~l~~~ 565 (588)
++. +.|||+++++.|+++
T Consensus 392 ~~~--~~e~l~~~l~~l~~~ 409 (410)
T 3e2y_A 392 FIK--KDSTLDAAEEIFRAW 409 (410)
T ss_dssp CCC--CHHHHHHHHHHHHTC
T ss_pred EcC--CHHHHHHHHHHHHhc
Confidence 876 999999999998764
No 143
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.90 E-value=4.3e-21 Score=206.50 Aligned_cols=336 Identities=11% Similarity=0.091 Sum_probs=206.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--------CCCCCeEEE-cCCCchhHHHHHHHHHHhcCC
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--------FYSNPRLLT-VYDHENEAAALMIESSKKRGA 249 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--------~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~ 249 (588)
...+++|+.+++++|++ .++|++|+|+|+.+++.++. +++||+|++ ..+|++ .. ..++..|+
T Consensus 62 ~~~~~l~~~la~~~g~~----~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~-~~----~~~~~~g~ 132 (437)
T 3bb8_A 62 RFNDAFEKKLGEYLGVP----YVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPT-TV----NPTIQNGL 132 (437)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHH-HH----HHHHHTTC
T ss_pred hHHHHHHHHHHHHHCCC----cEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHH-HH----HHHHHcCC
Confidence 45679999999999985 38999999999999999885 788999664 556664 22 23456899
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC--C
Q 037063 250 RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK--D 326 (588)
Q Consensus 250 ~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~--d 326 (588)
+++.+++++.++.+|+++|+++|+ +++++|++++ .+|...|+++| ++|+++|+++|+|+++..+. +
T Consensus 133 ~~~~v~~~~~~~~~d~~~l~~~i~--------~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~ 201 (437)
T 3bb8_A 133 IPVFVDVDIPTYNVNASLIEAAVS--------DKTKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYD 201 (437)
T ss_dssp EEEECCEETTTTEECGGGHHHHCC--------TTEEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEET
T ss_pred EEEEEeccCccCCcCHHHHHHhcC--------CCCeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCceEC
Confidence 999999974478899999999997 6799999986 47888999999 99999999999999998762 1
Q ss_pred CCCCCCCCCCCcEEEeccCccCCCCCCc-eEEEEEeCcchhcc----cCCCCC---CCceEeeecCCCcccccccccccc
Q 037063 327 MDTLGLSLFKPDFLICSFYKIFGENPSG-FGCLFVKKSSASVL----SGSTSS---VSTIMGIEPSFSEIIELETLDESS 398 (588)
Q Consensus 327 ~~~l~l~~~~~D~vv~S~~K~~G~~P~G-~G~L~v~~~~~~~l----~~~~~g---~~g~v~~~~~~~~~~~~~~~~~~~ 398 (588)
...++ ..+|+++.|++|..++ |.| .|+++.+++.+..+ .....+ +.+..+ .........+...+. +
T Consensus 202 ~~~~~---~~~d~~~~s~~~~k~l-~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~ 275 (437)
T 3bb8_A 202 GKMAG---TFGDIGTVSFYPAKHI-TMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDN-TCKKRFGQQLGSLPF-G 275 (437)
T ss_dssp TEETT---SSSSEEEEECSTTSSS-CCSSCEEEEESCHHHHHHHHHHHBTTBCC-----------------CCSCCCT-T
T ss_pred Ceecc---cccCEEEEECcCCcCC-CCCCeEEEEeCCHHHHHHHHHHHHhCccccccccccc-ccccccccccccccc-c
Confidence 22222 1179988997654444 223 47777665654432 211111 000000 000000000000000 1
Q ss_pred cccCCCCC-------ccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCC
Q 037063 399 QSKFPESS-------ISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFD 471 (588)
Q Consensus 399 f~e~GT~~-------~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~ 471 (588)
|++.+|+. ...+ +...++..++.+ +...++.+++++++.+.|.++ +++.++.......
T Consensus 276 ~~~~~~~~~~g~~~~~~~~----~aa~~l~~l~~~--~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~~~~~~ 340 (437)
T 3bb8_A 276 YDHKYTYSHLGYNLKITDM----QAACGLAQLERI--EEFVEKRKANFKYLKDALQSC---------ADFIELPEATENS 340 (437)
T ss_dssp CCGGGCBCSCCCBCCCBHH----HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHGGGG---------TTTEECCCCCTTE
T ss_pred ccccccccccCcccCCCHH----HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcc---------CCccccCCCCCCC
Confidence 21222221 1222 112344444443 455555688999999999885 3444443211111
Q ss_pred ccc--EEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccc--cC--ccccc------chHHHHHHHHhhhcCCCCCcCCc
Q 037063 472 RGP--SLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFL--QN--IFFSG------EYEQERVRVLETRSGTNETRSGV 539 (588)
Q Consensus 472 rg~--iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~--c~--~~~~~------~~~~~~~~~l~~~~~~~~~~~g~ 539 (588)
..+ .+.+.+....| ++.+.+.+.|.++||.++.+.. |+ +.+.. .... ....+..
T Consensus 341 ~~~~~~~~~~~~~~~~--~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~----------- 406 (437)
T 3bb8_A 341 DPSWFGFPITLKEDSG--VSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELT-NTDRIMN----------- 406 (437)
T ss_dssp ECCCSSEEEEECGGGS--SCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCH-HHHHHHH-----------
T ss_pred ceeeEEEEEEECCcCc--CcHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCc-HHHHHhc-----------
Confidence 112 23333332111 4578888889899999998754 32 21110 0000 0111112
Q ss_pred cEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 540 SVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 540 ~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
..||++++..+|.+||+++++.|+++++..
T Consensus 407 ~~lrl~~~~~~t~~di~~i~~~l~~~~~~~ 436 (437)
T 3bb8_A 407 QTFWIGIYPGLTHDHLDYVVSKFEEFFGLN 436 (437)
T ss_dssp HEEEECCSTTCCHHHHHHHHHHHHHHTTTT
T ss_pred CEEEecCCCCCCHHHHHHHHHHHHHHHccc
Confidence 179999999999999999999999987654
No 144
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.89 E-value=1.4e-22 Score=219.68 Aligned_cols=314 Identities=12% Similarity=0.095 Sum_probs=198.4
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+++++++++++|++ ++++++|+++|+.+++. + +++||+|++ ...|++ ....+...++..|++++.++.
T Consensus 132 ~~~~~~l~~~la~~~g~~----~~i~~~sGt~al~~~l~-~-~~~Gd~Vi~~~~~y~~-~~~~~~~~~~~~G~~v~~v~~ 204 (464)
T 1ibj_A 132 NPTRDALESLLAKLDKAD----RAFCFTSGMAALSAVTH-L-IKNGEEIVAGDDVYGG-SDRLLSQVVPRSGVVVKRVNT 204 (464)
T ss_dssp CHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHT-T-SCTTCEEEEESSCCHH-HHHHHHHTSGGGTCEEEEECT
T ss_pred CHHHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHH-H-hCCCCEEEEECCCchh-HHHHHHHHHHHcCCEEEEeCC
Confidence 346789999999999974 37788888999998886 5 789999665 445554 333333455778999999986
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ |.++|+++|+ +++++|++++++|+||.++|+++| ++|+++|++||+|+++..+....+++ +
T Consensus 205 ~------d~~~l~~~i~--------~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~---~ 267 (464)
T 1ibj_A 205 T------KLDEVAAAIG--------PQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLE---L 267 (464)
T ss_dssp T------SHHHHHHHCC--------SSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGG---T
T ss_pred C------CHHHHHHHhc--------cCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhh---c
Confidence 4 7899999987 789999999999999999999999 99999999999999988763222332 3
Q ss_pred CCcEEEeccCccCCCCCCce--EEEEEeC-cchhcccCCC--CCCCceEeeecCCCcccccccccccccccCCCCCccch
Q 037063 336 KPDFLICSFYKIFGENPSGF--GCLFVKK-SSASVLSGST--SSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGV 410 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~--G~L~v~~-~~~~~l~~~~--~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~ 410 (588)
++|+++.|+||++|. |.|+ |++++++ ++++.+.... .| + +.+....
T Consensus 268 ~~div~~S~sK~~~g-~~Gl~~G~l~~~~~~l~~~l~~~~~~~g--~--------------------------~~~~~~~ 318 (464)
T 1ibj_A 268 GADIVMHSATKFIAG-HSDVMAGVLAVKGEKLAKEVYFLQNSEG--S--------------------------GLAPFDC 318 (464)
T ss_dssp TCSEEEEETTTTTTC-SSCCCCEEEEECSHHHHHHHHHHHHHTT--C--------------------------BCCHHHH
T ss_pred CCEEEEECCcccccC-CCCCcEEEEEEChHHHHHHHHHHHHhcC--C--------------------------CCCHHHH
Confidence 489999999997763 6675 9999996 5656554322 11 0 1111110
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH--HcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCc
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANAL--MNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRI 488 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L--~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i 488 (588)
.+...+|+.+... ++...+....+.+++.+.- .+..++.- ...|+++++.+.. ...++++.|.+.+ .
T Consensus 319 ---~a~~~al~~~~~r-~~~~~~~~~~l~~~l~~~~~v~~~~~~~L-~~~p~~~~~~~~~-~g~g~~~~~~l~~-----~ 387 (464)
T 1ibj_A 319 ---WLCLRGIKTMALR-IEKQQENARKIAMYLSSHPRVKKVYYAGL-PDHPGHHLHFSQA-KGAGSVFSFITGS-----V 387 (464)
T ss_dssp ---HHHHHHHTTHHHH-HHHHHHHHHHHHHHHHTCTTCCEEECTTS-TTSTTHHHHTTTC-SCCCSEEEEECSC-----H
T ss_pred ---HHHHhchhhHHHH-HHHHHHHHHHHHHHHHhCCCceEEECCCC-CCCcchHHHhccC-CCCceEEEEEECC-----H
Confidence 1222344322111 2333333344444443210 01001100 0124455555432 1357899998742 1
Q ss_pred C-HHHHHHHHHhCCcEecccc----ccCcccccchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCCCCCHHHHHHHHHH
Q 037063 489 D-PALVQKLADRHNISLSCGF----LQNIFFSGEYEQERVRVLETRSGTNETRSGV--SVVTAALGCLTNFEDTYRLWAF 561 (588)
Q Consensus 489 ~-~~~v~~~l~~~gI~v~~G~----~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~~t~eDv~~li~~ 561 (588)
. ...+.+.|...||.++.|. .|++....... ... ......|. +.||+|+|. ||++++++.
T Consensus 388 ~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~------~~~---~~~~~~g~~~~~iRlsvg~----edi~~li~~ 454 (464)
T 1ibj_A 388 ALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHAS------IPA---EVREARGLTEDLVRISAGI----EDVDDLISD 454 (464)
T ss_dssp HHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCS------CCS---SSSSSSSCCTTCEEEECCS----SCHHHHHHH
T ss_pred HHHHHHHHhcCcceEeecCCCCceeeeccccccccc------CCH---HHHHhcCCCcCeEEEEeCC----CCHHHHHHH
Confidence 1 2234455555799999886 56543211000 000 00001232 389999997 899999999
Q ss_pred HHHhhhh
Q 037063 562 VSRFLDA 568 (588)
Q Consensus 562 l~~~l~~ 568 (588)
|++.+++
T Consensus 455 L~~al~~ 461 (464)
T 1ibj_A 455 LDIAFKT 461 (464)
T ss_dssp HHHHHHS
T ss_pred HHHHHhh
Confidence 9998764
No 145
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.89 E-value=8.8e-22 Score=209.57 Aligned_cols=309 Identities=12% Similarity=0.061 Sum_probs=202.4
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
.++.+.+|+.+++++|+++++ |++++| |+|+.+++.++ +++||+|++ ...|++....+........+..++.+++
T Consensus 70 ~~~~~~~~~~la~~~g~~~~~--i~~~sG-t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 145 (417)
T 3n0l_A 70 DEIETLAIERCKKLFNCKFAN--VQPNSG-SQANQGVYAAL-INPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGV 145 (417)
T ss_dssp HHHHHHHHHHHHHHHTCSEEE--CCCSSH-HHHHHHHHHHH-SCTTCEEEEECC----------------CCSEEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCCcc--eEeccH-HHHHHHHHHHh-cCCCCEEEecccccccccchhhhhhhhcceeeeEeccC
Confidence 456667889999999996543 767666 89999999999 899999664 4455432121111111224566777777
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC---CCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK---DMDTLGL 332 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~---d~~~l~l 332 (588)
+ .++.+|+++|++++++ .++++|++++++| |...|+++| ++|+++|+++|+|+++..+. ......+
T Consensus 146 ~-~~~~~d~~~l~~~i~~-------~~~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~ 215 (417)
T 3n0l_A 146 E-LDGRIDYEKVREIAKK-------EKPKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPF 215 (417)
T ss_dssp C-TTSSCCHHHHHHHHHH-------HCCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCT
T ss_pred C-CCCCcCHHHHHHHHHh-------cCCeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCcc
Confidence 7 6778999999999972 3688888877664 999999999 99999999999999975531 1111112
Q ss_pred CCCCCcEEEeccCccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchh
Q 037063 333 SLFKPDFLICSFYKIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVS 411 (588)
Q Consensus 333 ~~~~~D~vv~S~~K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~ 411 (588)
. .+|++++|+||.++. |.| |+++.+ +++++.+......+ ..|+++...+
T Consensus 216 ~--~~di~~~s~sK~l~g-~~~-G~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~- 265 (417)
T 3n0l_A 216 P--YAHVVSSTTHKTLRG-PRG-GIIMTNDEELAKKINSAIFPG-------------------------IQGGPLMHVI- 265 (417)
T ss_dssp T--TCSEEEEESSTTTCS-CSC-EEEEESCHHHHHHHHHHHTTT-------------------------TCSSCCHHHH-
T ss_pred c--cceEEEeeCccccCC-CCe-eEEEECCHHHHHHHhhhhCCc-------------------------ccCCcHHHHH-
Confidence 1 379999999997652 664 999998 46666554322110 1123333332
Q ss_pred hHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHH
Q 037063 412 SKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPA 491 (588)
Q Consensus 412 ~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~ 491 (588)
+++..++......+++.+.++...+++++.+.|.++ +++++.+. ..+.++.+.+... .++..
T Consensus 266 --aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~---~~~~~~~~~~~~~---~~~~~ 327 (417)
T 3n0l_A 266 --AAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR----------KFKLVSDG---TDNHLVLMSFLDR---EFSGK 327 (417)
T ss_dssp --HHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT----------TCEEGGGS---CSSSEEEEECTTS---SSCHH
T ss_pred --HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC----------CceeccCC---CCceEEEEEcccC---CCCHH
Confidence 455556655432346788889999999999999874 34554421 2345555555431 25678
Q ss_pred HHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC----CCHHHHHHHHHHHHHhhh
Q 037063 492 LVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL----TNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 492 ~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~----~t~eDv~~li~~l~~~l~ 567 (588)
.+.++|.++||.++.+..- .... ...+...+|+++... .+.+||+++++.|++.++
T Consensus 328 ~~~~~l~~~gi~v~~~~~~--~~~~------------------~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~ 387 (417)
T 3n0l_A 328 DADLALGNAGITANKNTVP--GEIR------------------SPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILD 387 (417)
T ss_dssp HHHHHHHHTTEECEECCCT--TCCS------------------CTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCeEEeccccC--CCCc------------------ccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHh
Confidence 8899999999999864311 0000 001223799987643 468999999999999886
Q ss_pred h
Q 037063 568 A 568 (588)
Q Consensus 568 ~ 568 (588)
.
T Consensus 388 ~ 388 (417)
T 3n0l_A 388 D 388 (417)
T ss_dssp T
T ss_pred c
Confidence 5
No 146
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.89 E-value=5.3e-22 Score=224.99 Aligned_cols=322 Identities=11% Similarity=-0.025 Sum_probs=219.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
..+.++++.+|+++|++ ..+++++|+|+|+.+++.++ +++||+|+++ ..|.+ .+.. .++..|++++.++.+
T Consensus 173 ~~i~e~e~~lA~~~gae---~~i~v~nGtt~an~~ai~al-~~pGD~VLv~~~~H~S-~~~~---~~~l~Ga~~v~v~~~ 244 (730)
T 1c4k_A 173 GPAVAAEKHAARVYNAD---KTYFVLGGSSNANNTVTSAL-VSNGDLVLFDRNNHKS-VYNS---ALAMAGGRPVYLQTN 244 (730)
T ss_dssp THHHHHHHHHHHHTTCS---EEEEESSHHHHHHHHHHHHH-CCTTCEEEEETTCCHH-HHHH---HTTTTCCEEEEECEE
T ss_pred HHHHHHHHHHHHHHCCC---cEEEECCHHHHHHHHHHHHh-cCCCCEEEEcCCchHH-HHHH---HHHHCCCEEEEEeCC
Confidence 46789999999999995 34888888889999999999 8999997755 45544 3322 245679999998775
Q ss_pred CCC----CccCHHHH-----HHHHhhhccc-cCCCcc-eEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC-
Q 037063 258 WPN----LRIHSGKL-----MKKIVGKRKK-KKKKKR-GLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS- 324 (588)
Q Consensus 258 ~~~----~~i~~e~l-----~~~i~~~~~~-~~~~~t-~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~- 324 (588)
..+ +.+|+++| +++|++...+ ....++ ++++++++ |++|.+.|+++| ++|+++|++|++|+++...
T Consensus 245 ~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~ 323 (730)
T 1c4k_A 245 RNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYE 323 (730)
T ss_dssp ECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGG
T ss_pred ccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEccccccc
Confidence 221 44788888 8888620000 001112 89999886 689999999999 9999999999999997542
Q ss_pred -CC-----CCCCCCCCCCCc----EEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 325 -KD-----MDTLGLSLFKPD----FLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 325 -~d-----~~~l~l~~~~~D----~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
.. ...+++..+++| +++.|+||++|. |.+.|+++++++.+..-. ..++ ...+...
T Consensus 324 ~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g-~~~gg~I~v~~~~l~g~~-------~~i~-------~~~~~~~ 388 (730)
T 1c4k_A 324 QFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAG-FSQTSQIHKKDSHIKGQL-------RYCD-------HKHFNNS 388 (730)
T ss_dssp GSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSC-CTTCEEEEEECGGGTTST-------TCCC-------HHHHHHH
T ss_pred ccCcccCCcCcccccccCCCCCCEEEEECCCCCCCC-CCCEEEEEecchhhcCcc-------cccC-------HHHHHHH
Confidence 11 123443334577 999999997773 778899999987642100 0000 0000000
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCC-----
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDHADA-LGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKV----- 468 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~-~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~----- 468 (588)
. ..+ +.+++++..+ +++..|++++.. .| +...++...+++++++.|.+. ++++++++|..
T Consensus 389 ~-~~~-~stsp~~~~i---aal~aA~~~l~~~~g-~~~~~~~~~~a~~lr~~L~~~--------i~g~~v~~p~~~~~~~ 454 (730)
T 1c4k_A 389 F-NLF-MSTSPFYPMY---AALDVNAAMQEGEAG-RKLWHDLLITTIEARKKLIKA--------GSMFRPFVPPVVNGKK 454 (730)
T ss_dssp H-HHH-SCSSCCHHHH---HHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHT--------TCSSEESSCSEETTEE
T ss_pred H-HHh-CCCCCcHHHH---HHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHhhh--------CCCeEEcccccccccc
Confidence 0 023 5677776664 777788887766 34 555678889999999999871 25677776632
Q ss_pred ---------------------------CCC-cc--cE----EEEEeec---C----CCCCcCHHHHHHHHHhCCcEeccc
Q 037063 469 ---------------------------MFD-RG--PS----LAFNVFD---W----NGTRIDPALVQKLADRHNISLSCG 507 (588)
Q Consensus 469 ---------------------------~~~-rg--~i----v~f~~~~---~----~g~~i~~~~v~~~l~~~gI~v~~G 507 (588)
... .+ .+ ++|.+++ . .+..++...+.+.|.++||.+...
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~ 534 (730)
T 1c4k_A 455 WEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKS 534 (730)
T ss_dssp GGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEE
T ss_pred ccccccccccccchhhccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEEC
Confidence 000 11 11 5666642 1 112367888999998889987531
Q ss_pred cccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 508 FLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 508 ~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+...||++++..+|.+|+++|+++|.++.+.
T Consensus 535 ------------------------------~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~~ 565 (730)
T 1c4k_A 535 ------------------------------DLNSILFLMTPAETPAKMNNLITQLLQLQRL 565 (730)
T ss_dssp ------------------------------CSSEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 2228999999999999999999999998654
No 147
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.89 E-value=3.8e-22 Score=213.80 Aligned_cols=307 Identities=12% Similarity=0.070 Sum_probs=201.3
Q ss_pred HHHHHHHHHHhC--------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEE
Q 037063 182 SKIRKRIMDFMN--------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVS 252 (588)
Q Consensus 182 ~~~r~~ia~~lg--------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~ 252 (588)
.++|+.++++++ +++++ |++|+|+|+++.+++.++ .++||+|++. ..|++ .. ..+++..|++++
T Consensus 86 ~~lr~~la~~~~~~~g~~~~~~~~~--i~~~~G~~~ai~~~~~~~-~~~gd~Vl~~~p~y~~-~~---~~~~~~~g~~~~ 158 (428)
T 1iay_A 86 PEFRKAIAKFMEKTRGGRVRFDPER--VVMAGGATGANETIIFCL-ADPGDAFLVPSPYYPA-FN---RDLRWRTGVQLI 158 (428)
T ss_dssp HHHHHHHHHHHHHHTTTCSCCCTTS--CEEEEHHHHHHHHHHHHH-CCTTCEEEEESSCCTT-HH---HHTTTTTCCEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCCChhh--EEEccChHHHHHHHHHHh-CCCCCeEEEccCCCcc-hH---HHHHHhcCCEEE
Confidence 467777777776 65554 999999999999999998 7899997654 44543 22 123345799999
Q ss_pred EEeccCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCC-C-
Q 037063 253 SAEFAWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGS-K- 325 (588)
Q Consensus 253 ~v~~~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~-~- 325 (588)
.++.+.. +..+|+++|++++++. .....++++|++++++|+||..+| +++| ++|+++|+++|+|+++... .
T Consensus 159 ~v~~~~~~~~~~d~~~l~~~l~~~--~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~ 236 (428)
T 1iay_A 159 PIHCESSNNFKITSKAVKEAYENA--QKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFD 236 (428)
T ss_dssp EECCCTTTTTCCCHHHHHHHHHHH--HHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCS
T ss_pred EeecCCccCCcCCHHHHHHHHHHH--HhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccC
Confidence 9998632 3468999999998721 111246899999999999999999 7777 8999999999999997642 1
Q ss_pred --CCCC-CCCC------CCCCc--EEEeccCccCCCCCCceEEEEE-eCcchhcccCCCCCCCceEeeecCCCccccccc
Q 037063 326 --DMDT-LGLS------LFKPD--FLICSFYKIFGENPSGFGCLFV-KKSSASVLSGSTSSVSTIMGIEPSFSEIIELET 393 (588)
Q Consensus 326 --d~~~-l~l~------~~~~D--~vv~S~~K~~G~~P~G~G~L~v-~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~ 393 (588)
...+ ..+. .+.+| +++.|++|.+|.+..++|++++ ++++++.+......
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~------------------- 297 (428)
T 1iay_A 237 TPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSF------------------- 297 (428)
T ss_dssp SSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTT-------------------
T ss_pred CCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhc-------------------
Confidence 0101 0111 01257 8899999999842233699999 45566554321100
Q ss_pred ccccccccCCCCCccchhhHHHHHHHHHHH---HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCC
Q 037063 394 LDESSQSKFPESSISGVSSKLVECKGLDHA---DALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMF 470 (588)
Q Consensus 394 ~~~~~f~e~GT~~~~~~~~~~al~~aL~~l---~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~ 470 (588)
.+.+.... +++..+|+.. ++ .++++.++++.+++++.+.|.++ +++++.+
T Consensus 298 ---------~~~~~~~~---~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~---- 350 (428)
T 1iay_A 298 ---------GLVSTQTQ---YFLAAMLSDEKFVDN-FLRESAMRLGKRHKHFTNGLEVV----------GIKCLKN---- 350 (428)
T ss_dssp ---------SCCCHHHH---HHHHHHTTCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT----------TCCBCCC----
T ss_pred ---------ccCCHHHH---HHHHHHhcChHHHHH-HHHHHHHHHHHHHHHHHHHHHhc----------CCcccCC----
Confidence 01111111 2333444432 22 25678888889999999999885 2334332
Q ss_pred CcccEEEEEeecCCCCC--cCHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecC
Q 037063 471 DRGPSLAFNVFDWNGTR--IDPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALG 547 (588)
Q Consensus 471 ~rg~iv~f~~~~~~g~~--i~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg 547 (588)
..+.++.+.+.+..... .....+.+.| +++||.++.|..+.. .+.++||+|++
T Consensus 351 ~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~------------------------~~~~~iRis~~ 406 (428)
T 1iay_A 351 NAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFEC------------------------QEPGWFRVCFA 406 (428)
T ss_dssp SSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTC------------------------SSSSEEEEECS
T ss_pred CeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCC------------------------CCCCEEEEEEe
Confidence 23556666765411000 1133455555 456999998754421 11238999999
Q ss_pred CCCCHHHHHHHHHHHHHhhhh
Q 037063 548 CLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 548 ~~~t~eDv~~li~~l~~~l~~ 568 (588)
..+.||++++++.|++++++
T Consensus 407 -~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 407 -NMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp -SSCHHHHHHHHHHHHHHHHT
T ss_pred -cCCHHHHHHHHHHHHHHHhc
Confidence 67999999999999998764
No 148
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.89 E-value=5.5e-22 Score=212.68 Aligned_cols=302 Identities=12% Similarity=0.123 Sum_probs=207.0
Q ss_pred HHHHHHHHHHh-----CCCCCCc-eEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHh-cCCEEEE
Q 037063 182 SKIRKRIMDFM-----NISEDDY-TLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKK-RGARVSS 253 (588)
Q Consensus 182 ~~~r~~ia~~l-----ga~~~e~-~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~-~G~~v~~ 253 (588)
.++|+.|++++ ++++++. .|++|+|+|+|+.+++.++ +++||+|++. ..|+. . ...++. .|++++.
T Consensus 91 ~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~Vl~~~p~y~~-~----~~~~~~~~g~~~~~ 164 (430)
T 2x5f_A 91 EELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLF-VNQDDTILLPEHNWGN-Y----KLVFNTRNGANLQT 164 (430)
T ss_dssp HHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHHHHHHHHH-CCTTCEEEEESSCCTH-H----HHHHTTTTCCEEEE
T ss_pred HHHHHHHHHHHhccCcccCCCccceEEEcCCchHHHHHHHHHH-hCCCCEEEEcCCcCcc-H----HHHHHHhcCCeEEE
Confidence 47888888888 7765320 2999999999999999999 8999997654 44543 2 345566 8999999
Q ss_pred EeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHH-----cCcEEEEeCCCcCC
Q 037063 254 AEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAE-----KGWHVLLDATALGS 324 (588)
Q Consensus 254 v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~-----~g~~vvvDaa~~~~ 324 (588)
++++..++.+|+++|+++++. . ..+++++++++++|+||..+| +++| ++|++ +|+++|+|+++...
T Consensus 165 ~~~~~~~~~~d~~~l~~~l~~----~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~ 239 (430)
T 2x5f_A 165 YPIFDKDGHYTTDSLVEALQS----Y-NKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGL 239 (430)
T ss_dssp ECCBCTTSCBCSHHHHHHHHH----C-CSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTC
T ss_pred EeccCccCCcCHHHHHHHHHh----c-CCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccc
Confidence 998743467899999999972 0 127899999999999999999 6677 88999 99999999996542
Q ss_pred -CC---CCCC--CCCC-CCC---cEEEeccCccCCCCCCceEEEEE---eCcchhcccCCCCCCCceEeeecCCCccccc
Q 037063 325 -KD---MDTL--GLSL-FKP---DFLICSFYKIFGENPSGFGCLFV---KKSSASVLSGSTSSVSTIMGIEPSFSEIIEL 391 (588)
Q Consensus 325 -~d---~~~l--~l~~-~~~---D~vv~S~~K~~G~~P~G~G~L~v---~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~ 391 (588)
.+ ..++ .+.. ... ++++.|++|.||.+..++|++++ ++++++.+...... .
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~--~-------------- 303 (430)
T 2x5f_A 240 FYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKG--L-------------- 303 (430)
T ss_dssp BCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHH--H--------------
T ss_pred cCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhh--h--------------
Confidence 11 1111 1211 234 68899999999832223799999 87777665432110 0
Q ss_pred ccccccccccCCCCCccchhhHHHHHHHHH----HHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCC
Q 037063 392 ETLDESSQSKFPESSISGVSSKLVECKGLD----HADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPK 467 (588)
Q Consensus 392 ~~~~~~~f~e~GT~~~~~~~~~~al~~aL~----~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~ 467 (588)
. +. ...+.+.... +++..+|+ +.+. ++++.++.+.+++++.+.|.+.... .+++++.+
T Consensus 304 -~----~~-~~~~~~~~~~---~a~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~------~g~~~~~~- 365 (430)
T 2x5f_A 304 -I----RS-NISSGPLPTQ---SAVKHVLKNNKQFDKE--IEQNIQTLKERYEVTKEVVYADQYH------SHWQAYDF- 365 (430)
T ss_dssp -H----HT-TTSSCCHHHH---HHHHHHHHSCHHHHHH--HHHHHHHHHHHHHHHHHHHTCGGGT------TTEEECCC-
T ss_pred -h----hc-ccCCCChHHH---HHHHHHHccChHHHHH--HHHHHHHHHHHHHHHHHHHHhhCCC------CCceeeCC-
Confidence 0 00 1112232222 34455665 3333 4568888888999999998832000 14666654
Q ss_pred CCCCccc-EEEEEeecCCCCCcCHHHHHHHHHh-CCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEe
Q 037063 468 VMFDRGP-SLAFNVFDWNGTRIDPALVQKLADR-HNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAA 545 (588)
Q Consensus 468 ~~~~rg~-iv~f~~~~~~g~~i~~~~v~~~l~~-~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvS 545 (588)
.++ ++.+.+.+ ++...+.+.|.+ +||.+++| . .+ ++|+|
T Consensus 366 ----~~g~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g--~--------------------------~~--~iRis 406 (430)
T 2x5f_A 366 ----NSGYFMAIKVHD-----VDPEALRKHLIDKYSIGVIAL--N--------------------------AT--DIRIA 406 (430)
T ss_dssp ----CBSSEEEEEESS-----SCHHHHHHHHHHHHCEECEEC--S--------------------------SS--EEEEE
T ss_pred ----CceEEEEeCCCC-----CCHHHHHHHHHHhCCEEEecC--C--------------------------CC--eEEEE
Confidence 244 46666652 456666666655 89999876 1 22 89999
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhh
Q 037063 546 LGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 546 lg~~~t~eDv~~li~~l~~~l~~ 568 (588)
++. ++.||++++++.|++++++
T Consensus 407 ~~~-~~~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 407 FSC-VEKDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp GGG-SCGGGHHHHHHHHHHHHHH
T ss_pred Eec-CCHHHHHHHHHHHHHHHHh
Confidence 995 5899999999999998764
No 149
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.89 E-value=1.6e-21 Score=209.41 Aligned_cols=306 Identities=13% Similarity=0.090 Sum_probs=200.7
Q ss_pred HHHHHHHHHHhC--------CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHH-hcCCEE
Q 037063 182 SKIRKRIMDFMN--------ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSK-KRGARV 251 (588)
Q Consensus 182 ~~~r~~ia~~lg--------a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~-~~G~~v 251 (588)
.++|+.|+++++ ++++ .|+||+|+|+|+.+++.++ .++||+|++. ..|++ .. ..++ ..|+++
T Consensus 89 ~~l~~~la~~~~~~~~~~~~~~~~--~v~~~~gg~~a~~~~~~~l-~~~gd~vl~~~p~~~~-~~----~~~~~~~g~~~ 160 (435)
T 3piu_A 89 PAFKKAMVDFMAEIRGNKVTFDPN--HLVLTAGATSANETFIFCL-ADPGEAVLIPTPYYPG-FD----RDLKWRTGVEI 160 (435)
T ss_dssp HHHHHHHHHHHHHHTTTSSCCCGG--GEEEEEHHHHHHHHHHHHH-CCTTCEEEEEESCCTT-HH----HHTTTTTCCEE
T ss_pred HHHHHHHHHHHHHhhCCCCCCCHH--HEEEcCChHHHHHHHHHHh-cCCCCeEEECCCcccc-HH----HHHHHhcCCEE
Confidence 477888888877 5554 4999999999999999999 8999997654 44443 32 2234 579999
Q ss_pred EEEeccCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcCC--
Q 037063 252 SSAEFAWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALGS-- 324 (588)
Q Consensus 252 ~~v~~~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~~-- 324 (588)
+.++++.. ...+|+++|+++|++. .....++++|++++++|+||..+|.++ | ++|+++|+++|+|+++...
T Consensus 161 ~~~~~~~~~~~~~d~~~l~~~l~~~--~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~ 238 (435)
T 3piu_A 161 VPIHCTSSNGFQITETALEEAYQEA--EKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAF 238 (435)
T ss_dssp EEEECCGGGTSCCCHHHHHHHHHHH--HHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCC
T ss_pred EEeeCCCccCCcCCHHHHHHHHHHH--HhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEecccccccc
Confidence 99998732 2458999999999721 112247899999999999999999855 5 7799999999999997652
Q ss_pred --CCCCCC-CC-CC---------CCCcEEEeccCccCCCCCCceEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccc
Q 037063 325 --KDMDTL-GL-SL---------FKPDFLICSFYKIFGENPSGFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIE 390 (588)
Q Consensus 325 --~d~~~l-~l-~~---------~~~D~vv~S~~K~~G~~P~G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~ 390 (588)
.....+ .+ .. ...++++.|++|.||.++.++|++++++ .+.+.+......
T Consensus 239 ~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~---------------- 302 (435)
T 3piu_A 239 SSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF---------------- 302 (435)
T ss_dssp SSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGG----------------
T ss_pred CCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhhc----------------
Confidence 100000 00 00 1123889999999984334589999955 444433211100
Q ss_pred cccccccccccCCCCCccchhhHHHHHHHHH---HHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCC
Q 037063 391 LETLDESSQSKFPESSISGVSSKLVECKGLD---HADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPK 467 (588)
Q Consensus 391 ~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~---~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~ 467 (588)
++.+.... +++...++ ++++ .+++..++++++++++.+.|.++ +++++.+
T Consensus 303 ------------~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~- 355 (435)
T 3piu_A 303 ------------GLVSSQTQ---HLLSAMLSDKKLTKN-YIAENHKRLKQRQKKLVSGLQKS----------GISCLNG- 355 (435)
T ss_dssp ------------SCCCHHHH---HHHHHHHHCHHHHHH-HHHHHHHHHHHHHHHHHHHHHTT----------TCEECCC-
T ss_pred ------------CCCCHHHH---HHHHHHhcChHHHHH-HHHHHHHHHHHHHHHHHHHHHhc----------CCcccCC-
Confidence 01111111 22333333 2222 24667788888899999999874 3555543
Q ss_pred CCCCcccEEEEEeecCCCCC-c-CHHHH-HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEE
Q 037063 468 VMFDRGPSLAFNVFDWNGTR-I-DPALV-QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTA 544 (588)
Q Consensus 468 ~~~~rg~iv~f~~~~~~g~~-i-~~~~v-~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRv 544 (588)
..+.++.+.+.+..... . +...+ .++++++||.+++|..|.+ .+.+++|+
T Consensus 356 ---~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~------------------------~~~~~iRi 408 (435)
T 3piu_A 356 ---NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHC------------------------TEPGWFRV 408 (435)
T ss_dssp ---CSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTC------------------------SSTTEEEE
T ss_pred ---CeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCC------------------------CCCCEEEE
Confidence 22456666665421000 0 12334 4555666999998866531 12239999
Q ss_pred ecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 545 ALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 545 Slg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+++.. +.|||+++++.|++++++
T Consensus 409 ~~~~~-~~e~i~~~l~~l~~~l~~ 431 (435)
T 3piu_A 409 CFANL-PERTLDLAMQRLKAFVGE 431 (435)
T ss_dssp ECSSS-CHHHHHHHHHHHHHHHHH
T ss_pred EeeCC-CHHHHHHHHHHHHHHHHH
Confidence 99876 999999999999998865
No 150
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.89 E-value=1.1e-21 Score=209.72 Aligned_cols=304 Identities=13% Similarity=0.083 Sum_probs=199.2
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHH--HHHHhCCCC--C---------CCeEEEcCCCchhHHHHHHHHHHhcC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFK--LLAESYPFY--S---------NPRLLTVYDHENEAAALMIESSKKRG 248 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~--lv~~s~~~~--~---------gd~ll~~~e~~s~~~~~~~~~a~~~G 248 (588)
.++|+.|++++++++++ |++|+|+++++. +++.++ .. + ||+|++....+... ...++..|
T Consensus 73 ~~lr~~ia~~~~~~~~~--i~~t~G~~~al~~~~~~~~l-~~~~~g~~~~~~~~gd~Vlv~~p~y~~~----~~~~~~~g 145 (423)
T 3ez1_A 73 PSARALFAGYLDVKAEN--VLVWNNSSLELQGLVLTFAL-LHGVRGSTGPWLSQTPKMIVTVPGYDRH----FLLLQTLG 145 (423)
T ss_dssp HHHHHHHHHHTTSCGGG--EEECSSCHHHHHHHHHHHHH-HTCCTTCSSCGGGGCCEEEEEESCCHHH----HHHHHHHT
T ss_pred HHHHHHHHHHhCCChhh--EEEeCCcHHHHHHHHHHHHH-hccCCCccccccCCCCEEEEcCCCcHHH----HHHHHHcC
Confidence 58999999999998765 999999999998 888887 55 6 58876544433212 34456679
Q ss_pred CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEE-EeCCCCCCCccCCHHH---H-HHH-HHcCcEEEEeCCCc
Q 037063 249 ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFV-FPLQSKVTGARYSYMW---M-SVA-AEKGWHVLLDATAL 322 (588)
Q Consensus 249 ~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~-~~~~sn~tG~~~pl~~---I-~~a-~~~g~~vvvDaa~~ 322 (588)
++++.++.+ +++ +|+++|++++.+ .+++++|+ .++++|+||..+|.++ | ++| +++|+++|+|+++.
T Consensus 146 ~~~~~v~~~-~~g-~d~~~l~~~l~~------~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~ 217 (423)
T 3ez1_A 146 FELLTVDMQ-SDG-PDVDAVERLAGT------DPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYR 217 (423)
T ss_dssp CEEEEEEEE-TTE-ECHHHHHHHHHS------CTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTS
T ss_pred CEEEeccCC-CCC-CCHHHHHHHHhh------CCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcc
Confidence 999999997 444 999999999941 16788886 5689999999999984 5 667 89999999999976
Q ss_pred CC-C---CCCC----CCC----CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccc
Q 037063 323 GS-K---DMDT----LGL----SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIE 390 (588)
Q Consensus 323 ~~-~---d~~~----l~l----~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~ 390 (588)
.. . .... +.+ .....++++.|++|.++ ++.++|++++++++++.+.......
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~G~r~G~~~~~~~~~~~~~~~~~~~--------------- 281 (423)
T 3ez1_A 218 VHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITF-AGAGLGFVASSEDNIRWLSKYLGAQ--------------- 281 (423)
T ss_dssp SCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSC-SSSSCEEEEECHHHHHHHHHHHHHS---------------
T ss_pred hhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhcc-CCcceEEEEeCHHHHHHHHHHHhhh---------------
Confidence 31 1 0000 000 12236799999999643 2678999999988877664322110
Q ss_pred cccccccccccCCCCCccchhhHHHHHHHHHH----HHHhCHHHHH----HHHHHHHHHHHHHHHcccCCCCCCCCC-eE
Q 037063 391 LETLDESSQSKFPESSISGVSSKLVECKGLDH----ADALGLILIS----NRARYLINWLANALMNLHHPHSETGIP-LV 461 (588)
Q Consensus 391 ~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~----l~~~G~~~i~----~r~~~L~~~l~~~L~~L~h~~~~~g~~-~v 461 (588)
..++..+.+ .++..+++. +.+. +++.. ++...+.+.|.+.|.++ + .+
T Consensus 282 ----------~~~~~~~~~----~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~l~~~---------~~~~ 337 (423)
T 3ez1_A 282 ----------SIGPNKVEQ----ARHVKFLTEYPGGLEGL-MRDHAAIIAPKFRAVDEVLRAELGEG---------GEYA 337 (423)
T ss_dssp ----------CSCCCHHHH----HHHHHHHHHSTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTT---------TSSE
T ss_pred ----------ccCCCHHHH----HHHHHHHHhccchHHHH-HHHHHHHHHHHHHHHHHHHHHhcCcC---------CCce
Confidence 001111111 122223322 0110 22333 33334444444444432 3 46
Q ss_pred EEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEecc-ccccCcccccchHHHHHHHHhhhcCCCCCcCCcc
Q 037063 462 RIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSC-GFLQNIFFSGEYEQERVRVLETRSGTNETRSGVS 540 (588)
Q Consensus 462 ~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~-G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~ 540 (588)
++..| ..+.++.+.+.+ .+.+.+.++|.++||.+++ |.+|..+. ..+.+
T Consensus 338 ~~~~p----~~g~~~~~~~~~-----~~~~~~~~~l~~~gv~v~~~g~~~~~~~---------------------~~~~~ 387 (423)
T 3ez1_A 338 TWTLP----KGGYFISLDTAE-----PVADRVVKLAEAAGVSLTPAGATYPAGQ---------------------DPHNR 387 (423)
T ss_dssp EECCC----SBSSCEEEEESS-----SCHHHHHHHHHHTTEECCCTTTTSSTTC---------------------CSSSC
T ss_pred EEeCC----CccEEEEEECCC-----CcHHHHHHHHHHCCcEEecCcccccCCC---------------------CCCCC
Confidence 66654 235566677754 2467788889999999998 55542110 01223
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHhhhhhhc
Q 037063 541 VVTAALGCLTNFEDTYRLWAFVSRFLDADFV 571 (588)
Q Consensus 541 ~vRvSlg~~~t~eDv~~li~~l~~~l~~~~~ 571 (588)
+||+|++.. +.+||+++++.|++++++.-.
T Consensus 388 ~iRis~~~~-~~~~i~~~~~~l~~~l~~~~~ 417 (423)
T 3ez1_A 388 NLRLAPTRP-PVEEVRTAMQVVAACIRLATE 417 (423)
T ss_dssp EEEECCSSS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcCCC-CHHHHHHHHHHHHHHHHHHHH
Confidence 999999876 999999999999998876543
No 151
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.89 E-value=1.3e-20 Score=201.89 Aligned_cols=318 Identities=15% Similarity=0.095 Sum_probs=211.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
....++|+.|+++++++ .|++|+|+|+|+.+++.++. +||+|+ ....|++ .. ..++..|++++.++++
T Consensus 52 ~~~~~l~~~la~~~~~~----~v~~~~ggt~al~~~l~~l~--~gd~Vlv~~~~~~~-~~----~~~~~~G~~~~~v~~~ 120 (424)
T 2po3_A 52 PLVREFEERVAGLAGVR----HAVATCNATAGLQLLAHAAG--LTGEVIMPSMTFAA-TP----HALRWIGLTPVFADID 120 (424)
T ss_dssp HHHHHHHHHHHHHHTSS----EEEEESCHHHHHHHHHHHHT--CCSEEEEESSSCTH-HH----HHHHHTTCEEEEECBC
T ss_pred HHHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHcC--CCCEEEECCCccHH-HH----HHHHHcCCEEEEEecC
Confidence 45679999999999983 49999999999999999973 688866 4556664 22 3456689999999998
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC--CCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK--DMDTLGLSL 334 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~--d~~~l~l~~ 334 (588)
..++.+|+++|+++++ +++++|++++ +||...++++| ++|+++|+++|+|+++..+. +...++ .
T Consensus 121 ~~~~~~d~~~l~~~i~--------~~~~~v~~~~---~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~--~ 187 (424)
T 2po3_A 121 PDTGNLDPDQVAAAVT--------PRTSAVVGVH---LWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAG--S 187 (424)
T ss_dssp TTTSSBCHHHHGGGCC--------TTEEEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETT--S
T ss_pred CCcCCcCHHHHHHhhC--------cCCcEEEEEC---CCCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCeecc--c
Confidence 4467899999998887 6789988854 79999999999 99999999999999988642 112222 1
Q ss_pred CCCcEEEeccC--ccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC-CCccch
Q 037063 335 FKPDFLICSFY--KIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE-SSISGV 410 (588)
Q Consensus 335 ~~~D~vv~S~~--K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT-~~~~~~ 410 (588)
+ +|+++.|++ |.++ |.++|+++.+ +++++.+.+....+ +... + .+...|+ ..+..+
T Consensus 188 ~-~di~~~S~sk~K~l~--~~~~G~~v~~~~~l~~~l~~~~~~~-~~~~----------~------~~~~~g~~~~~~~~ 247 (424)
T 2po3_A 188 L-GDAEVFSFHATKAVN--AFEGGAVVTDDADLAARIRALHNFG-FDLP----------G------GSPAGGTNAKMSEA 247 (424)
T ss_dssp S-SSEEEEECCTTSSSC--CSSCEEEEESCHHHHHHHHHHHBTT-TTCT----------T------CCTTCCCBCCCCHH
T ss_pred c-cCEEEEeCCCCCCcc--CCCCeEEEeCCHHHHHHHHHHHhcC-cccc----------c------cccccCcCCCcCHH
Confidence 1 589999998 6666 5567888888 56766665432211 1000 0 0001121 122222
Q ss_pred hhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCc-ccEEEEEeecCCCCCcC
Q 037063 411 SSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDR-GPSLAFNVFDWNGTRID 489 (588)
Q Consensus 411 ~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~r-g~iv~f~~~~~~g~~i~ 489 (588)
+...++..+.. ++.+.++.+.+++++.+.|.++ ++++++.+...... ..++.+.+.+.. ..++
T Consensus 248 ----~aa~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 311 (424)
T 2po3_A 248 ----AAAMGLTSLDA--FPEVIDRNRRNHAAYREHLADL---------PGVLVADHDRHGLNNHQYVIVEIDEAT-TGIH 311 (424)
T ss_dssp ----HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHTCSC---------TTEEECCGGGGSCCCCCCEEEEECHHH-HSSC
T ss_pred ----HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhccC---------CCccccCCCCCCccccEEEEEEECCcc-chhh
Confidence 22234433333 5778888899999999998874 56887762211111 246667665200 0145
Q ss_pred HHHHHHHHHhCCcEeccccccCcccc--cchH------HHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHH
Q 037063 490 PALVQKLADRHNISLSCGFLQNIFFS--GEYE------QERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAF 561 (588)
Q Consensus 490 ~~~v~~~l~~~gI~v~~G~~c~~~~~--~~~~------~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~ 561 (588)
...+.+.|.++||.++.. |.+... ..+. ......+.. ..||++++.+++.+||+++++.
T Consensus 312 ~~~l~~~L~~~gI~v~~~--~~~~~~~~~~~~~~g~~~~~~~~r~~~-----------~~l~l~~~~~~t~e~i~~~~~~ 378 (424)
T 2po3_A 312 RDLVMEVLKAEGVHTRAY--FSPGCHELEPYRGQPHAPLPHTERLAA-----------RVLSLPTGTAIGDDDIRRVADL 378 (424)
T ss_dssp HHHHHHHHHHTTEECBCT--TCSCGGGSTTTTTSCCCCCHHHHHHHT-----------TEEEECCSTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCceecc--cCCccccchhhhhcCCCCChhHHHHhc-----------CEEEeeCCCCCCHHHHHHHHHH
Confidence 778888889999999863 321100 0000 000000111 1599999999999999999999
Q ss_pred HHHhhhhh
Q 037063 562 VSRFLDAD 569 (588)
Q Consensus 562 l~~~l~~~ 569 (588)
|+++++..
T Consensus 379 L~~~~~~~ 386 (424)
T 2po3_A 379 LRLCATRG 386 (424)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 99987653
No 152
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.89 E-value=8e-22 Score=211.29 Aligned_cols=304 Identities=12% Similarity=0.080 Sum_probs=198.0
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHH--HHHHHhCCCC--C----------CCeEEEcCCCchhHHHHHHHHHHhc
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAF--KLLAESYPFY--S----------NPRLLTVYDHENEAAALMIESSKKR 247 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al--~lv~~s~~~~--~----------gd~ll~~~e~~s~~~~~~~~~a~~~ 247 (588)
.++|+.|++++++++++ |++|+|+++++ ++++.++ .. + ||+|++....+... ...++..
T Consensus 81 ~~lr~~ia~~~~~~~~~--i~~t~G~~~al~~~~~~~~l-~~~~~g~~~~~~~~~gd~V~v~~p~y~~~----~~~~~~~ 153 (427)
T 3ppl_A 81 VDIRQIWADLLGVPVEQ--VLAGDASSLNIMFDVISWSY-IFGNNDSVQPWSKEETVKWICPVPGYDRH----FSITERF 153 (427)
T ss_dssp HHHHHHHHHHHTSCGGG--EEECSSCHHHHHHHHHHHHH-HHCCTTCSSCGGGSSCCEEEEEESCCHHH----HHHHHHT
T ss_pred HHHHHHHHHHhCCCcce--EEEeCCcHHHHHHHHHHHHH-hccCCcccccccCCCCCEEEEcCCCcHHH----HHHHHHc
Confidence 58999999999998765 99999999999 5888876 44 5 88976554433312 3456778
Q ss_pred CCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEE-eCCCCCCCccCCHH---HH-HHH-HHcCcEEEEeCCC
Q 037063 248 GARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVF-PLQSKVTGARYSYM---WM-SVA-AEKGWHVLLDATA 321 (588)
Q Consensus 248 G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~-~~~sn~tG~~~pl~---~I-~~a-~~~g~~vvvDaa~ 321 (588)
|++++.+|++ +++ +|+++|++++.. +++++|++ ++++|+||..+|.+ +| ++| +++|++||+|+++
T Consensus 154 g~~~~~v~~~-~~g-~d~~~l~~~l~~-------~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y 224 (427)
T 3ppl_A 154 GFEMISVPMN-EDG-PDMDAVEELVKN-------PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAY 224 (427)
T ss_dssp TCEEEEEEEE-TTE-ECHHHHHHHTTS-------TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTT
T ss_pred CCEEEEeCCC-CCC-CCHHHHHHHHhc-------CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCC
Confidence 9999999998 555 999999999851 57888875 58999999999999 55 677 8999999999986
Q ss_pred cCC-C---CCCCCCC-------CCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccc
Q 037063 322 LGS-K---DMDTLGL-------SLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIE 390 (588)
Q Consensus 322 ~~~-~---d~~~l~l-------~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~ 390 (588)
... . ....+.+ .....++++.|++|.++ ++.++|+++.++++++.+.......
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~G~r~G~~~~~~~l~~~~~~~~~~~--------------- 288 (427)
T 3ppl_A 225 AVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITL-AGAGVSFFLTSAENRKWYTGHAGIR--------------- 288 (427)
T ss_dssp TTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSC-TTSSCEEEECCHHHHHHHHHHHHHH---------------
T ss_pred cccccCCCCCCccchhhhhhccCCCCcEEEEechhhccC-cCccEEEEEcCHHHHHHHHHHhhcc---------------
Confidence 531 1 0111111 12336799999999844 3578999999888776654322100
Q ss_pred cccccccccccCCCCCccchhhHHHHHHHHHH---HHHhCHHHHHHHH----HHHHHHHHHHHHcccCCCCCCCCCeEEE
Q 037063 391 LETLDESSQSKFPESSISGVSSKLVECKGLDH---ADALGLILISNRA----RYLINWLANALMNLHHPHSETGIPLVRI 463 (588)
Q Consensus 391 ~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~---l~~~G~~~i~~r~----~~L~~~l~~~L~~L~h~~~~~g~~~v~i 463 (588)
..++..+.+ .++..+++. +.+. +.+..++. ..+.+.|.+.|..+ +++++
T Consensus 289 ----------~~~~~~~~q----~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~l~~~---------~~~~~ 344 (427)
T 3ppl_A 289 ----------GIGPNKVNQ----LAHARYFGDAEGVRAV-MRKHAASLAPKFNKVLEILDSRLAEY---------GVAQW 344 (427)
T ss_dssp ----------CSCCCHHHH----HHHHHHHCSHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHGGG---------TCCEE
T ss_pred ----------cCCCCHHHH----HHHHHHHhChhhHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCC---------CceEE
Confidence 001111111 122222221 1111 23333333 34444444444432 24555
Q ss_pred eCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEE
Q 037063 464 YGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVT 543 (588)
Q Consensus 464 ~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vR 543 (588)
..| ..+.++.+.+.+ .+...+.+.|.++||.+++|..|-... . ..+.++||
T Consensus 345 ~~p----~~g~~~~~~~~~-----~~~~~~~~~l~~~gv~v~~~g~~~~~~-------------~-------~~~~~~~R 395 (427)
T 3ppl_A 345 TVP----AGGYFISLDVVP-----GTASRVAELAKEAGIALTGAGSSYPLR-------------Q-------DPENKNLR 395 (427)
T ss_dssp CCC----SBSSCEEEECST-----TCHHHHHHHHHHTTEECCCTTTTSGGG-------------C-------CTTSCEEE
T ss_pred eCC----CccEEEEEECCc-----chHHHHHHHHHHCCCEEecCcCcCCCC-------------C-------CCCCCeEE
Confidence 554 235566677654 246778888899999999854442100 0 01223999
Q ss_pred EecCCCCCHHHHHHHHHHHHHhhhhhhc
Q 037063 544 AALGCLTNFEDTYRLWAFVSRFLDADFV 571 (588)
Q Consensus 544 vSlg~~~t~eDv~~li~~l~~~l~~~~~ 571 (588)
+|++.. +.+||+++++.|.+++++.-.
T Consensus 396 is~~~~-~~~~i~~~~~~l~~~l~~~~~ 422 (427)
T 3ppl_A 396 LAPSLP-PVEELEVAMDGVATCVLLAAA 422 (427)
T ss_dssp ECCSSS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCC-CHHHHHHHHHHHHHHHHHHHH
Confidence 999766 899999999999998876543
No 153
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.88 E-value=7.1e-22 Score=225.73 Aligned_cols=321 Identities=12% Similarity=0.028 Sum_probs=223.1
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
...+.++++.+++++|++ ..+++++|+|+|+.+++.++ +++||+|+++ ..|.+ .+.. ++..|+++++++.
T Consensus 204 ~g~v~~~ee~la~l~G~d---~~i~~~~Gtt~a~~~~i~al-~~~GD~Vlv~~~~h~s-~~~~----~~~~G~~~v~v~~ 274 (755)
T 2vyc_A 204 TGAFGESEKYAARVFGAD---RSWSVVVGTSGSNRTIMQAC-MTDNDVVVVDRNCHKS-IEQG----LMLTGAKPVYMVP 274 (755)
T ss_dssp CHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHHH-CCTTCEEEEESSCCHH-HHHH----HHHHCCEEEEECC
T ss_pred ccHHHHHHHHHHHHhCCC---ceEEECCcHHHHHHHHHHHh-cCCCCEEEECCCchHH-HHHH----HHHcCCEEEEEeC
Confidence 456789999999999995 34888888899999999999 8999997654 55554 3332 3456999999987
Q ss_pred cCCC----Ccc-----CHHHHHHHHhhh-cc-ccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC
Q 037063 257 AWPN----LRI-----HSGKLMKKIVGK-RK-KKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS 324 (588)
Q Consensus 257 ~~~~----~~i-----~~e~l~~~i~~~-~~-~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~ 324 (588)
+..+ +.+ |.++|+++|++. .. .....++++++++++ |++|.++|+++| ++|+++|++|++|+++...
T Consensus 275 ~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~ 353 (755)
T 2vyc_A 275 SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_dssp CBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTT
T ss_pred CCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchh
Confidence 6321 335 999999999731 00 011234468889886 799999999999 9999999999999998642
Q ss_pred CCCCCC--CCCC-CC--CcE------EEeccCccCCCCCCceEEEEEeCc--chhcccCCCCCCCceEeeecCCCccccc
Q 037063 325 KDMDTL--GLSL-FK--PDF------LICSFYKIFGENPSGFGCLFVKKS--SASVLSGSTSSVSTIMGIEPSFSEIIEL 391 (588)
Q Consensus 325 ~d~~~l--~l~~-~~--~D~------vv~S~~K~~G~~P~G~G~L~v~~~--~~~~l~~~~~g~~g~v~~~~~~~~~~~~ 391 (588)
....+. +.+. .. +|+ ++.|+||+++. |.|.|+++++++ .++.. . +
T Consensus 354 ~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g-~~~g~~i~~~~~~~~i~~~---~------------------~ 411 (755)
T 2vyc_A 354 ARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LSQASYIHVREGRGAINFS---R------------------F 411 (755)
T ss_dssp GGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSC-CTTCEEEEEECCBTCCCHH---H------------------H
T ss_pred cccCcccCCcchhcCCcCCccCCCeEEEECccccccC-cCCeeeeeecCcccccCHH---H------------------H
Confidence 111110 0000 12 465 99999997763 788999999886 21100 0 0
Q ss_pred ccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCC--CCCCCCCeEEEeCCCCC
Q 037063 392 ETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHP--HSETGIPLVRIYGPKVM 469 (588)
Q Consensus 392 ~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~--~~~~g~~~v~i~~p~~~ 469 (588)
.... ..+ +.+|+++..+ +++..|++++...|.+.+.++...++++++++|.++... .. ..-.+++++|...
T Consensus 412 ~~~~-~~~-~s~sp~~~~i---aal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~--~~~~~~~~~~~~~ 484 (755)
T 2vyc_A 412 NQAY-MMH-ATTSPLYAIC---ASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTAD--GSWFFKPWNKEVV 484 (755)
T ss_dssp HHHH-HHT-SCSSCCHHHH---HHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCCCCEESSCSEE
T ss_pred HHHH-HHh-CCCCHHHHHH---HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcccccccc--ccceeeccCchhc
Confidence 0000 023 5678887765 788889988876645778889999999999999886210 00 0012777776421
Q ss_pred C----------------------------------------C-----cccEEEEEeec--CCC----CCcCHHHHHHHHH
Q 037063 470 F----------------------------------------D-----RGPSLAFNVFD--WNG----TRIDPALVQKLAD 498 (588)
Q Consensus 470 ~----------------------------------------~-----rg~iv~f~~~~--~~g----~~i~~~~v~~~l~ 498 (588)
. . ....++|++.+ .+| ..+++..+.+.|+
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~ 564 (755)
T 2vyc_A 485 TDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLG 564 (755)
T ss_dssp ECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHH
T ss_pred cccccccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHH
Confidence 0 0 11467887763 233 2367789999999
Q ss_pred hCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 499 RHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 499 ~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
++||.+... +...||+++++.+|.+|+++|+++|.++.+
T Consensus 565 ~~gI~~e~~------------------------------~~~~v~~~~~~g~t~~~~~~l~~al~~~~~ 603 (755)
T 2vyc_A 565 RHGIVPTRT------------------------------TDFQIMFLFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_dssp TTTCCCSEE------------------------------CSSEEEEECCTTCCTTTTHHHHHHHHHHHH
T ss_pred HCCCEEeec------------------------------CCCeEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 899986431 122899999999999999999999999864
No 154
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.88 E-value=7.1e-22 Score=210.35 Aligned_cols=310 Identities=10% Similarity=0.059 Sum_probs=200.1
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
..+++.+|+++++++|++++. |++++ +++|+.+++.++ +++||+|++ ...|++....+........+..+..++.
T Consensus 75 ~~~~~~~~~~la~~~~~~~~~--v~~~s-Gs~a~~~a~~~~-~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 150 (420)
T 3gbx_A 75 DVVEQLAIDRAKELFGADYAN--VQPHS-GSQANFAVYTAL-LQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGI 150 (420)
T ss_dssp HHHHHHHHHHHHHHHTCSEEE--CCCSS-HHHHHHHHHHHH-CCTTCEEEEEEEC------------CHHHHSEEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCce--eEecC-cHHHHHHHHHHh-cCCCCEEEecchhhcceeccchhhhhcccceeEEeccC
Confidence 456677889999999996432 54555 588999999988 899999664 4445432222211111223455666666
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC---CCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK---DMDTLGL 332 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~---d~~~l~l 332 (588)
+ .++.+|+++|+++++. .++++|++++++| |...|+++| ++|+++|+++|+|+++..+. ......+
T Consensus 151 ~-~~~~~d~~~l~~~i~~-------~~~~~v~~~~~~~--~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~ 220 (420)
T 3gbx_A 151 D-ESGKIDYDEMAKLAKE-------HKPKMIIGGFSAY--SGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPV 220 (420)
T ss_dssp C-TTCSCCHHHHHHHHHH-------HCCSEEEECCTTC--CSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCST
T ss_pred C-ccCCcCHHHHHHHHHh-------cCCeEEEEecCcc--CCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCccc
Confidence 6 6778999999999982 2589999987665 568999999 99999999999999976531 1111112
Q ss_pred CCCCCcEEEeccCccCCCCCCceEEEEEeC---cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccc
Q 037063 333 SLFKPDFLICSFYKIFGENPSGFGCLFVKK---SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISG 409 (588)
Q Consensus 333 ~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~---~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~ 409 (588)
. .+|+++.|+||.++ +|.| |+++.++ ++.+.+......+ ..|+++...
T Consensus 221 ~--~~di~~~s~sK~~~-g~~g-g~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~ 271 (420)
T 3gbx_A 221 P--HAHVVTTTTHKTLA-GPRG-GLILAKGGDEELYKKLNSAVFPS-------------------------AQGGPLMHV 271 (420)
T ss_dssp T--TSSEEEEESSGGGC-SCSC-EEEEESSCCHHHHHHHHHHHC-----------------------------CCCCHHH
T ss_pred c--cCCEEEeecccCCC-CCCc-eEEEEcCCcHHHHHHhhhhcCCC-------------------------CCCCcchhH
Confidence 2 28999999999885 2776 9999888 5544443222110 112233332
Q ss_pred hhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcC
Q 037063 410 VSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRID 489 (588)
Q Consensus 410 ~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~ 489 (588)
+ +++..++..+...+++.+.++...+++++.+.|.++ +++++.+. ..+.++.+.+.+.. ++
T Consensus 272 ~---~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~---~~~~~~~~~~~~~~---~~ 332 (420)
T 3gbx_A 272 I---AGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR----------GYKVVSGG---TENHLFLLDLVDKN---LT 332 (420)
T ss_dssp H---HHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT----------TCEEGGGS---CSSSEEEEECGGGT---CC
T ss_pred H---HHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc----------CCeeccCC---CCCeEEEEEcCCCC---CC
Confidence 2 344445544322246788899999999999999874 35555431 24566666665321 45
Q ss_pred HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCC----CHHHHHHHHHHHHHh
Q 037063 490 PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLT----NFEDTYRLWAFVSRF 565 (588)
Q Consensus 490 ~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~----t~eDv~~li~~l~~~ 565 (588)
...+.++|.++||.++.+..-. .. ....+...||+++...+ +.+||+++++.|++.
T Consensus 333 ~~~~~~~l~~~gi~v~~~~~~~--~~------------------~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~ 392 (420)
T 3gbx_A 333 GKEADAALGRANITVNKNSVPN--DP------------------KSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDV 392 (420)
T ss_dssp HHHHHHHHHHTTEECEEECCTT--CS------------------SCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEeccccCCC--Cc------------------cccCCCcceEEecchhcccCCCHHHHHHHHHHHHHH
Confidence 7788888999999988731100 00 00122236999987654 489999999999998
Q ss_pred hhhh
Q 037063 566 LDAD 569 (588)
Q Consensus 566 l~~~ 569 (588)
+++.
T Consensus 393 l~~~ 396 (420)
T 3gbx_A 393 LDNI 396 (420)
T ss_dssp HHTT
T ss_pred HhCc
Confidence 8663
No 155
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.88 E-value=9.7e-22 Score=209.39 Aligned_cols=309 Identities=11% Similarity=0.040 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHh------CCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-----eEEEc-CCCchhHHHHHHHH--HHh
Q 037063 181 ESKIRKRIMDFM------NISEDDYTLVFTANQSSAFKLLAESYPFYSNP-----RLLTV-YDHENEAAALMIES--SKK 246 (588)
Q Consensus 181 ~~~~r~~ia~~l------ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-----~ll~~-~e~~s~~~~~~~~~--a~~ 246 (588)
..++|+.|++++ +++++ .|+||+|+|+|+++++.++ .++|| +|++. ...+.......... ...
T Consensus 77 ~~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~t~al~~~~~~l-~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~ 153 (417)
T 3g7q_A 77 KTALLNALAVLLRETLGWDIEPQ--NIALTNGSQSAFFYLFNLF-AGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVS 153 (417)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCGG--GEEEESCHHHHHHHHHHHH-SBC----CCBEEEESSCCCHHHHHC-----CCEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCcc--cEEEeCCcHHHHHHHHHHH-cCCCccCCcceEEEeCCCccccchhhccchhhhcc
Confidence 347788888876 45555 4999999999999999999 78877 76653 33332122111100 012
Q ss_pred cCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCc
Q 037063 247 RGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATAL 322 (588)
Q Consensus 247 ~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~ 322 (588)
.+..+..++.+..+..+|.++|+ +. +++++|++++++|+||..+| +++| ++|+++|+++|+|+++.
T Consensus 154 ~~~~~~~~~~~~~~~~~d~~~l~--~~--------~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~ 223 (417)
T 3g7q_A 154 ARPNIELLPEGQFKYHVDFEHLH--IG--------EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYG 223 (417)
T ss_dssp CCCEEEEEGGGEEEEECCGGGCC--CC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred ccCcccccCCcccccccCHHHhc--cc--------cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCc
Confidence 23445444432113457888887 55 68999999999999999999 6667 88999999999999976
Q ss_pred CCC---CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccccccc
Q 037063 323 GSK---DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQ 399 (588)
Q Consensus 323 ~~~---d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f 399 (588)
.+. ............++++.|++|+ +.+..++|+++.++++++.+.......
T Consensus 224 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~~~~~~~------------------------ 278 (417)
T 3g7q_A 224 VPFPGIIFSEARPLWNPNIILCMSLSKL-GLPGSRCGIIIANDKTITAIANMNGII------------------------ 278 (417)
T ss_dssp TTTTCCBCSCCCCCCCTTEEEEEESGGG-TCTTSCCEEEECCHHHHHHHHHHHHHH------------------------
T ss_pred cccccccccccccCCCCCEEEEEechhc-cCCCcceEEEEeCHHHHHHHHHhhcce------------------------
Confidence 431 1111111223478999999994 533456999998888777664322110
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHHhCHH----H-HHHHHHHHHHHHHHHHHcccCCCCCCCCC--eEEEeCCCCCCCc
Q 037063 400 SKFPESSISGVSSKLVECKGLDHADALGLI----L-ISNRARYLINWLANALMNLHHPHSETGIP--LVRIYGPKVMFDR 472 (588)
Q Consensus 400 ~e~GT~~~~~~~~~~al~~aL~~l~~~G~~----~-i~~r~~~L~~~l~~~L~~L~h~~~~~g~~--~v~i~~p~~~~~r 472 (588)
.. +.+..+. + .+...++...+. + +.++.++..+.+.+.|.+. .+ +++++.| ..
T Consensus 279 -~~-~~~~~~~---~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------l~~~~~~~~~~----~~ 338 (417)
T 3g7q_A 279 -SL-APGGMGP---A---MMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRY--------LSEERCLIHKP----EG 338 (417)
T ss_dssp -CC-CCCSHHH---H---HHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHH--------CCTTTCEEECC----CB
T ss_pred -ee-CCCcHHH---H---HHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHh--------cccCCceeeCC----Cc
Confidence 00 1111111 2 222333332222 2 4555666777777777662 12 3566654 23
Q ss_pred ccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCH
Q 037063 473 GPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNF 552 (588)
Q Consensus 473 g~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~ 552 (588)
+.++.+.+... .++...+.+.|.++||.+++|..|.++....+ ..+.++||+|++. +.
T Consensus 339 g~~~~~~~~~~---~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~-----------------~~~~~~iRis~~~--~~ 396 (417)
T 3g7q_A 339 AIFLWLWFKDL---PITTELLYQRLKARGVLMVPGHYFFPGLDKPW-----------------PHTHQCMRMNYVP--EP 396 (417)
T ss_dssp SSEEEEECTTC---SSCHHHHHHHHHHTTEECEEGGGGCTTBSSCC-----------------GGGGGEEEEESCS--CH
T ss_pred ceEEEEEcCCC---CCCHHHHHHHHHHCCEEEECchhhCCCCcccc-----------------ccCCCeEEEEecC--CH
Confidence 45555565431 15677888888899999999987753211100 0012399999985 99
Q ss_pred HHHHHHHHHHHHhhhhh
Q 037063 553 EDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 553 eDv~~li~~l~~~l~~~ 569 (588)
|||+++++.|++++++.
T Consensus 397 ~~i~~~~~~l~~~l~~~ 413 (417)
T 3g7q_A 397 DKIEAGVKILAEEIERA 413 (417)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988754
No 156
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.88 E-value=9.4e-22 Score=212.33 Aligned_cols=305 Identities=9% Similarity=0.031 Sum_probs=201.7
Q ss_pred HHHHHHHHHh----CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 183 KIRKRIMDFM----NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
++|+.|++++ |.+.+..+|++|+|+++|+.+++.++ +++||+|++ ...|+. . ...++..|++++.++++
T Consensus 99 ~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~-~----~~~~~~~g~~~~~v~~~ 172 (447)
T 3b46_A 99 SLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGL-LNAGDEVIVFEPFFDQ-Y----IPNIELCGGKVVYVPIN 172 (447)
T ss_dssp HHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT-H----HHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHH-cCCCCEEEEeCCCchh-H----HHHHHHcCCEEEEEeCC
Confidence 5666666665 54333235999999999999999999 899999664 444543 2 23456789999999986
Q ss_pred CC-----------CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCc
Q 037063 258 WP-----------NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATAL 322 (588)
Q Consensus 258 ~~-----------~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~ 322 (588)
.. ++.+|+++|+++|+ +++++|++++++|+||.++| +++| ++|+++|+++|+|+++.
T Consensus 173 ~~~~~~~~~~~~~~~~~d~~~l~~~l~--------~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~ 244 (447)
T 3b46_A 173 PPKELDQRNTRGEEWTIDFEQFEKAIT--------SKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYE 244 (447)
T ss_dssp CCGGGGTSCBCSTTSEECHHHHHTTCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CccccccccccccCcccCHHHHHHhhc--------cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccch
Confidence 33 35789999998887 68999999999999999987 5556 88999999999999965
Q ss_pred CCC------CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEE-eCcchhcccCCCCCCCceEeeecCCCccccccccc
Q 037063 323 GSK------DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFV-KKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLD 395 (588)
Q Consensus 323 ~~~------d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v-~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~ 395 (588)
... .+..++......|+++.|++|.||.+...+|++++ ++++++.+......
T Consensus 245 ~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~~--------------------- 303 (447)
T 3b46_A 245 HLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAAKAHTR--------------------- 303 (447)
T ss_dssp TCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHHHHHHH---------------------
T ss_pred hcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHHHHHHHHHHhh---------------------
Confidence 421 11112001234799999999999832223999999 77777655432100
Q ss_pred ccccccCCCCCccchhhHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 396 ESSQSKFPESSISGVSSKLVECKGLDHADALG-LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 396 ~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G-~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
...+.+... .+++..+|+.....+ ++++.++.+.+++++.+.|.++ | ++++.| ..+.
T Consensus 304 -----~~~~~~~~~---~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g---~~~~~~----~~g~ 361 (447)
T 3b46_A 304 -----ICFASPSPL---QEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL-------G---LPYTAP----EGTY 361 (447)
T ss_dssp -----HTSSCCHHH---HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-------T---CCEECC----SBSS
T ss_pred -----ccCCCChHH---HHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-------C---CeecCC----CeeE
Confidence 001112111 134456676542222 6778889999999999999885 2 334443 2244
Q ss_pred EEEEEeecCC---C--------CCcCHHHHH-HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEE
Q 037063 475 SLAFNVFDWN---G--------TRIDPALVQ-KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVV 542 (588)
Q Consensus 475 iv~f~~~~~~---g--------~~i~~~~v~-~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~v 542 (588)
++.+.+.... + ...+...+. ++++++||.+.+|..+..... . ..+.++|
T Consensus 362 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~------------~-------~~~~~~i 422 (447)
T 3b46_A 362 FVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEH------------E-------KAAENLL 422 (447)
T ss_dssp EEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGG------------G-------GGGTTEE
T ss_pred EEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCc------------c-------CCCCCEE
Confidence 5555654310 0 012333454 455679999988854421100 0 0112389
Q ss_pred EEecCCCCCHHHHHHHHHHHHHh
Q 037063 543 TAALGCLTNFEDTYRLWAFVSRF 565 (588)
Q Consensus 543 RvSlg~~~t~eDv~~li~~l~~~ 565 (588)
|+|++. +.|+|+++++.|+++
T Consensus 423 Rls~~~--~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 423 RFAVCK--DDAYLENAVERLKLL 443 (447)
T ss_dssp EEECCS--CHHHHHHHHHHGGGG
T ss_pred EEEEeC--CHHHHHHHHHHHHHH
Confidence 999874 899999999998874
No 157
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.88 E-value=1.1e-20 Score=202.62 Aligned_cols=343 Identities=10% Similarity=0.009 Sum_probs=222.5
Q ss_pred CCeeeecCCCCC------CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGHG------LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~g------l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|||+++.. +.++.+++++.+.+... ..++. . . | ..+...+
T Consensus 41 ~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~-~~~~~-----------------------~-~--~---~~~~~~~ 90 (429)
T 1s0a_A 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAM-SHVMF-----------------------G-G--I---THAPAIE 90 (429)
T ss_dssp TSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHC-SCCCC-----------------------S-S--E---ECHHHHH
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhc-ccccc-----------------------c-c--c---CCHHHHH
Confidence 567899986553 35788899887665321 11110 0 0 0 1244568
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--CC----CCCeEEE-cCCCchhHHHHHHHHHH-----h--c--
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--FY----SNPRLLT-VYDHENEAAALMIESSK-----K--R-- 247 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--~~----~gd~ll~-~~e~~s~~~~~~~~~a~-----~--~-- 247 (588)
+++++++++++++++ |+||+|+|+|+++++.++. .+ +|++|++ ...||......+ .... + .
T Consensus 91 l~~~la~~~~~~~~~--v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~-~~~~~~~~~~~~~~~ 167 (429)
T 1s0a_A 91 LCRKLVAMTPQPLEC--VFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAM-SVCDPDNSMHSLWKG 167 (429)
T ss_dssp HHHHHHHHSCTTCCE--EEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHH-TTSCTTTTTGGGGTT
T ss_pred HHHHHHHhCCCCCCE--EEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhh-hhcCCchhhcccccC
Confidence 888999999986654 9999999999999987641 12 5888664 445664232221 1100 0 0
Q ss_pred -CCEEEEEeccC-----CCCccCHHHHHHHHhhhccccCCCcceEEEEeCC-CCCCCccCC----HHHH-HHHHHcCcEE
Q 037063 248 -GARVSSAEFAW-----PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQ-SKVTGARYS----YMWM-SVAAEKGWHV 315 (588)
Q Consensus 248 -G~~v~~v~~~~-----~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~-sn~tG~~~p----l~~I-~~a~~~g~~v 315 (588)
...+..++++. ..+.+|+++|+++|++ . .+++++|++..+ +|+||.+.| +++| ++|+++|+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~----~-~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~l 242 (429)
T 1s0a_A 168 YLPENLFAPAPQSRMDGEWDERDMVGFARLMAA----H-RHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILL 242 (429)
T ss_dssp TSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHH----H-TTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEE
T ss_pred CCCCceEeCCCcccccccchHHHHHHHHHHHHh----C-CCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 11345555531 1235889999999872 0 136788888888 899999888 9999 9999999999
Q ss_pred EEeCCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCC-CceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccc
Q 037063 316 LLDATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENP-SGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIEL 391 (588)
Q Consensus 316 vvDaa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P-~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~ 391 (588)
|+|+++. ++.. ...++.....+|+++ +.|.+|. + .++|++++++++++.+.....+
T Consensus 243 i~De~~~~~g~~g~~~~~~~~~~~~d~~t--~sK~l~~-G~~~iG~~~~~~~~~~~l~~~~~~----------------- 302 (429)
T 1s0a_A 243 IADEIATGFGRTGKLFACEHAEIAPDILC--LGKALTG-GTMTLSATLTTREVAETISNGEAG----------------- 302 (429)
T ss_dssp EEECTTTTTTTTSSSSGGGGGTCCCSEEE--ECGGGGT-SSSCCEEEEECHHHHHHHHTSTTS-----------------
T ss_pred EEeehhhCCcccchHHHhhhcCCCCCEEE--ecccccC-CCccceEEEeCHHHHHHhhcCCCc-----------------
Confidence 9999986 3311 111111123478775 5597773 5 7899999999887766532100
Q ss_pred ccccccccccCCCC--CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCC
Q 037063 392 ETLDESSQSKFPES--SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVM 469 (588)
Q Consensus 392 ~~~~~~~f~e~GT~--~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~ 469 (588)
.+...+|. |..+ .++..++|+.+.+ +.+.++++.+++++.+.|.++.. .+.+..+.
T Consensus 303 ------~~~~~~t~~~n~~~---~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~------~~~~~~~~---- 360 (429)
T 1s0a_A 303 ------CFMHGPTFMGNPLA---CAAANASLAILES---GDWQQQVADIEVQLREQLAPARD------AEMVADVR---- 360 (429)
T ss_dssp ------SCSCCCTTTTCHHH---HHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHGGGGG------CTTEEEEE----
T ss_pred ------ccccCCCCCCCHHH---HHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhc------CCCEEEEE----
Confidence 00011222 2222 2455677777655 35678888999999999988621 23444222
Q ss_pred CCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC
Q 037063 470 FDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL 549 (588)
Q Consensus 470 ~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~ 549 (588)
..+.++.+.+.+. ++...+.+.|.++||.++.. . ..||+|+++.
T Consensus 361 -~~g~~~~~~~~~~----~~~~~l~~~l~~~Gi~v~~~-----------------------------~--~~iRis~~~~ 404 (429)
T 1s0a_A 361 -VLGAIGVVETTHP----VNMAALQKFFVEQGVWIRPF-----------------------------G--KLIYLMPPYI 404 (429)
T ss_dssp -EETTEEEEEESSC----BCHHHHHHHHHHTTEECCCB-----------------------------T--TEEEECCCTT
T ss_pred -EeeEEEEEEECCc----ccHHHHHHHHHHCCCEEecc-----------------------------C--CEEEEECCCC
Confidence 2356777776531 45667777777889998642 1 1899999999
Q ss_pred CCHHHHHHHHHHHHHhhhh
Q 037063 550 TNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 550 ~t~eDv~~li~~l~~~l~~ 568 (588)
++.||++++++.|++++++
T Consensus 405 ~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 405 ILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp CCHHHHHHHHHHHHHHTSS
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 9999999999999988753
No 158
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.88 E-value=3.6e-21 Score=207.49 Aligned_cols=300 Identities=14% Similarity=0.092 Sum_probs=192.4
Q ss_pred HHHHHHHHHHh----CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCE------
Q 037063 182 SKIRKRIMDFM----NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGAR------ 250 (588)
Q Consensus 182 ~~~r~~ia~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~------ 250 (588)
.++|+.|++++ +++++ .|+||+|+++++.++ .++ +++||+|++. ..|++ . ...++..|++
T Consensus 114 ~~lr~~ia~~~~~g~~~~~~--~i~~t~G~~~al~~~-~~l-~~~gd~Vl~~~p~~~~-~----~~~~~~~g~~g~~~~~ 184 (449)
T 3qgu_A 114 GALREAVASTFYGHAGRAAD--EIFISDGSKCDIARI-QMM-FGSKPTVAVQDPSYPV-Y----VDTSVMMGMTGDHNGT 184 (449)
T ss_dssp HHHHHHHHHHHHTTTTCCGG--GEEEESCHHHHHHHH-HHH-HCSSSCEEEEESCCTH-H----HHHHHHHTCSCCBCSS
T ss_pred HHHHHHHHHHHHcCCCCCHH--HEEEccCHHHHHHHH-HHH-hCCCCEEEEcCCCChh-H----HHHHHHcCCccccccc
Confidence 57889999988 66655 499999999999998 777 7899997654 44543 3 2344556887
Q ss_pred ----EEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCc
Q 037063 251 ----VSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATAL 322 (588)
Q Consensus 251 ----v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~ 322 (588)
++.++++.. +.+..+ +.+ .+++++|++++++|+||..+|.++ | ++|+++|+++|+|+++.
T Consensus 185 ~~~~~~~~~~~~~-~~~~~~-----~~~------~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~ 252 (449)
T 3qgu_A 185 GFDGIEYMVCNPD-NHFFPD-----LSK------AKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYA 252 (449)
T ss_dssp SBTTEEEEECCGG-GTTCCC-----GGG------CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTG
T ss_pred ccceeEEEecccc-cCCcCC-----hhH------cCCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchH
Confidence 999988632 222211 110 147899999999999999999555 5 77999999999999966
Q ss_pred CC-------CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccc
Q 037063 323 GS-------KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLD 395 (588)
Q Consensus 323 ~~-------~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~ 395 (588)
.. ..+..++ .....++++.|++|.+|.++.++|++++++++++........ . +...
T Consensus 253 ~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~---~------------~~~~- 315 (449)
T 3qgu_A 253 LYISNPDCPKTIYEIP-GADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHA---D------------WNRV- 315 (449)
T ss_dssp GGCCCTTSCSSGGGST-TGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHH---H------------HHHH-
T ss_pred hhhcCCCCCCCHhhcc-CCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHH---H------------HHHH-
Confidence 51 1111221 112367999999999984345699999988876420000000 0 0000
Q ss_pred ccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE
Q 037063 396 ESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS 475 (588)
Q Consensus 396 ~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i 475 (588)
. .+ ...+.+.... .+...+++......++++.++++.+++++.+.|.++ +++++.+ ..+.+
T Consensus 316 ~-~~-~~~~~~~~~~---~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~----~~~~~ 376 (449)
T 3qgu_A 316 M-TT-CFNGASNIVQ---AGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM----------GFSVYGG----DDAPY 376 (449)
T ss_dssp H-HH-SCCCCCHHHH---HHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------TCCEEES----SSSSE
T ss_pred h-hc-ccCCCCHHHH---HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC----------CCeeeCC----CCeeE
Confidence 0 00 1112222221 233344432111125778888999999999999985 2445544 23566
Q ss_pred EEEEeecCCCCCcCHHHHH-HHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHH
Q 037063 476 LAFNVFDWNGTRIDPALVQ-KLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFED 554 (588)
Q Consensus 476 v~f~~~~~~g~~i~~~~v~-~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eD 554 (588)
+.+.+.+ ++...+. ++++++||.+++|..|.+ .+.++||+|+ ..+.||
T Consensus 377 ~~~~~~~-----~~~~~~~~~l~~~~gI~v~pg~~f~~------------------------~~~~~iRis~--~~~~e~ 425 (449)
T 3qgu_A 377 IWVGFPG-----KPSWDVFAEILERCNIVTTPGSGYGP------------------------AGEGFVRASA--FGSREN 425 (449)
T ss_dssp EEEECTT-----SCHHHHHHHHHHHHCEECEEGGGGCG------------------------GGTTEEEEEC--CSCHHH
T ss_pred EEEECCC-----CCHHHHHHHHHHHCCEEEecchHhCC------------------------CCCCeEEEEe--cCCHHH
Confidence 6666652 4455554 566677999999876631 1223999995 459999
Q ss_pred HHHHHHHHHHhhhhh
Q 037063 555 TYRLWAFVSRFLDAD 569 (588)
Q Consensus 555 v~~li~~l~~~l~~~ 569 (588)
|+++++.|++++++.
T Consensus 426 i~~~l~~l~~~~~~~ 440 (449)
T 3qgu_A 426 ILEAVRRFKEAYGKR 440 (449)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999987653
No 159
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.88 E-value=4.7e-21 Score=204.90 Aligned_cols=307 Identities=15% Similarity=0.060 Sum_probs=198.6
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....+++++++++++|.+ .+++++|+++|+.+++.++ +++||+|++ ...|+. ....+...++..|++++.++.
T Consensus 80 ~p~~~~l~~~la~~~g~~----~~~~~~sG~~Ai~~al~~l-~~~Gd~Vi~~~~~y~~-~~~~~~~~~~~~g~~~~~v~~ 153 (414)
T 3ndn_A 80 NPTVSVFEERLRLIEGAP----AAFATASGMAAVFTSLGAL-LGAGDRLVAARSLFGS-CFVVCSEILPRWGVQTVFVDG 153 (414)
T ss_dssp CHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHTT-CCTTCEEEEESCCCHH-HHHHHHTHHHHTTCEEEEECT
T ss_pred ChHHHHHHHHHHHHHCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEcCCccch-HHHHHHHHHHHcCcEEEEeCC
Confidence 466789999999999973 3899999999999999999 899999764 455654 443444556778999999987
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ |+++|+++|+ +++++|+++.++|++|.+.|+++| ++|+++|+++|+|+++..+....++ .+
T Consensus 154 ~------d~~~l~~ai~--------~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~---~~ 216 (414)
T 3ndn_A 154 D------DLSQWERALS--------VPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGF---PL 216 (414)
T ss_dssp T------CHHHHHHHTS--------SCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCG---GG
T ss_pred C------CHHHHHHhcC--------CCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCch---hc
Confidence 4 7899999998 689999999999999999999999 9999999999999998765212222 23
Q ss_pred CCcEEEeccCccCCCCCCc---eEEEEEeCcchh-cccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchh
Q 037063 336 KPDFLICSFYKIFGENPSG---FGCLFVKKSSAS-VLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVS 411 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G---~G~L~v~~~~~~-~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~ 411 (588)
++|+++.|++|++| +.| .|+++++++.+. .++..... -.++.+. .
T Consensus 217 g~div~~S~sK~l~--~~G~~~~G~vv~~~~~~~~~l~~~~~~--------------------------~g~~~~~--~- 265 (414)
T 3ndn_A 217 GVDVVVYSGTKHID--GQGRVLGGAILGDREYIDGPVQKLMRH--------------------------TGPAMSA--F- 265 (414)
T ss_dssp TCSEEEEETTTTTT--CSSCCCCEEEEECHHHHTTHHHHHHHH--------------------------HCCCCCH--H-
T ss_pred CCCeEeccCCcccc--CCCCceEEEEEECHHHHHHHHHHHHHH--------------------------cCCCCCH--H-
Confidence 38999999999998 556 799999887654 33321100 0011111 1
Q ss_pred hHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE-EEeCCCCC------------CCcccEEEE
Q 037063 412 SKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV-RIYGPKVM------------FDRGPSLAF 478 (588)
Q Consensus 412 ~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v-~i~~p~~~------------~~rg~iv~f 478 (588)
....++..++. ++...++..+.++++.+.|.+. |.+ +++.|.-. ...|++++|
T Consensus 266 ---~a~~~~~~l~~--l~~r~~~~~~~a~~l~~~L~~~---------p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~ 331 (414)
T 3ndn_A 266 ---NAWVLLKGLET--LAIRVQHSNASAQRIAEFLNGH---------PSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTF 331 (414)
T ss_dssp ---HHHHHHHHGGG--HHHHHHHHHHHHHHHHHHHHTC---------TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEE
T ss_pred ---HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcC---------CCEeEEECCCCCCCcCHHHHHHhCCCCceEEEE
Confidence 11122222222 3444555566677777777763 444 45444321 124689999
Q ss_pred EeecCCC-CCcCHHHHHHHHHhCCcEeccccccCc----ccc-cchHHHHHHHHhhhcCCCCCcCCc--cEEEEecCCCC
Q 037063 479 NVFDWNG-TRIDPALVQKLADRHNISLSCGFLQNI----FFS-GEYEQERVRVLETRSGTNETRSGV--SVVTAALGCLT 550 (588)
Q Consensus 479 ~~~~~~g-~~i~~~~v~~~l~~~gI~v~~G~~c~~----~~~-~~~~~~~~~~l~~~~~~~~~~~g~--~~vRvSlg~~~ 550 (588)
.+.+... .......+...+...+|.++.|..++. ... ..... ...... .|. ..||+|+|.
T Consensus 332 ~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~--~~~~~~--------~g~~~~~iRlsvG~-- 399 (414)
T 3ndn_A 332 ALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMG--PEGRAA--------IGLGDGVVRISVGL-- 399 (414)
T ss_dssp EECSCGGGHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTH--HHHHHH--------TTCCTTEEEEECCS--
T ss_pred EEcCCccccHHHHHHHHHhCccceEcCCCCCCCceeeCccccccccCC--HHHHHh--------cCCCCCeEEEEeCc--
Confidence 9865100 001123334444445666777765442 111 01100 111111 222 399999997
Q ss_pred CHHHHHHHHHHHHHhh
Q 037063 551 NFEDTYRLWAFVSRFL 566 (588)
Q Consensus 551 t~eDv~~li~~l~~~l 566 (588)
||++.+++.|.+.|
T Consensus 400 --e~~~dli~dl~~al 413 (414)
T 3ndn_A 400 --EDTDDLIADIDRAL 413 (414)
T ss_dssp --SCHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHhh
Confidence 66777777766654
No 160
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.88 E-value=3.2e-21 Score=206.51 Aligned_cols=303 Identities=12% Similarity=0.089 Sum_probs=195.9
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHH--HHHHHhCCCCC---C---------CeEEEc-CCCchhHHHHHHHHHHh
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAF--KLLAESYPFYS---N---------PRLLTV-YDHENEAAALMIESSKK 246 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al--~lv~~s~~~~~---g---------d~ll~~-~e~~s~~~~~~~~~a~~ 246 (588)
.++|+.|++++++++++ |++|+|+++++ .+++.++ ..+ | ++|++. ..|+. . ...++.
T Consensus 79 ~~lr~~ia~~~~~~~~~--i~~t~G~~~al~l~~~~~~l-~~~~~~g~~~~~~~d~~~Vl~~~p~y~~-~----~~~~~~ 150 (422)
T 3d6k_A 79 ADIRELWAEALGLPADL--VVAQDGSSLNIMFDLISWSY-TWGNNDSSRPWSAEEKVKWLCPVPGYDR-H----FTITEH 150 (422)
T ss_dssp HHHHHHHHHHHTCCGGG--EEECSSCHHHHHHHHHHHHH-HHCCTTCSSCGGGSSCCEEEEEESCCHH-H----HHHHHH
T ss_pred HHHHHHHHHHhCCChhH--EEEecchHHHHHHHHHHHHh-cCcccccccccccCCCCEEEEeCCccHH-H----HHHHHH
Confidence 58999999999998765 99999999997 7777776 333 3 366654 44442 2 344566
Q ss_pred cCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEE-EeCCCCCCCccCCHHH---H-HHHH-HcCcEEEEeCC
Q 037063 247 RGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFV-FPLQSKVTGARYSYMW---M-SVAA-EKGWHVLLDAT 320 (588)
Q Consensus 247 ~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~-~~~~sn~tG~~~pl~~---I-~~a~-~~g~~vvvDaa 320 (588)
.|++++.++++ +++ +|+++|+++++. .++++|+ +++++||||..+|.++ | ++|+ ++|++||+|++
T Consensus 151 ~g~~~~~v~~~-~~g-~d~~~l~~~l~~-------~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~ 221 (422)
T 3d6k_A 151 FGFEMINVPMT-DEG-PDMGVVRELVKD-------PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNA 221 (422)
T ss_dssp HTCEEEEEEEE-TTE-ECHHHHHHHHTS-------TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECT
T ss_pred cCCEEEecCCC-CCC-CCHHHHHHHHhc-------CCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECC
Confidence 79999999997 454 999999999971 3688877 7999999999999985 4 6666 89999999999
Q ss_pred CcC-CC--C---CCCC-C----CCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccc
Q 037063 321 ALG-SK--D---MDTL-G----LSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEII 389 (588)
Q Consensus 321 ~~~-~~--d---~~~l-~----l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~ 389 (588)
+.. .. + ..++ + +.....++++.|++|..+ +..++|++++++++++.+......
T Consensus 222 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~GlriG~~~~~~~l~~~l~~~~~~--------------- 285 (422)
T 3d6k_A 222 YALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITH-AGSGVSFFASSKENIEWYASHANV--------------- 285 (422)
T ss_dssp TTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSC-TTSSCEEEECCHHHHHHHHHHHHH---------------
T ss_pred ccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcC-cccceEEEEeCHHHHHHHHHHHHh---------------
Confidence 852 11 1 1111 1 112346899999999844 234699999998877766532210
Q ss_pred ccccccccccccCCCCCccchhhHHHHHHHHHH---HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCC
Q 037063 390 ELETLDESSQSKFPESSISGVSSKLVECKGLDH---ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGP 466 (588)
Q Consensus 390 ~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~---l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p 466 (588)
+ ..+++.+.+ .++..+|+. +.+. ++++.++++...+++.+.|.+.- + +.++++++.|
T Consensus 286 ---------~-~~~~~~~~q----~a~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~l-~----~~~~~~~~~p 345 (422)
T 3d6k_A 286 ---------R-GIGPNKLNQ----LAHAQFFGDVAGLKAH-MLKHAASLAPKFERVLEILDSRL-S----EYGVAKWTSP 345 (422)
T ss_dssp ---------H-CSCCCHHHH----HHHHHHHCSHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-G----GGTCEEECCC
T ss_pred ---------h-cCCCCHHHH----HHHHHHHhCcchHHHH-HHHHHHHHHHHHHHHHHHHHHhc-C----cCCceEEeCC
Confidence 0 011111111 222334432 1111 34444444444555555554310 0 0124666554
Q ss_pred CCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEecc-ccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEe
Q 037063 467 KVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSC-GFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAA 545 (588)
Q Consensus 467 ~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~-G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvS 545 (588)
..+.++.+.+.+. +...+.+++.++||.+++ |..|..+. ..+.++||+|
T Consensus 346 ----~~g~~~~~~~~~~-----~~~~~~~~l~~~gV~v~~~g~~f~~~~---------------------~~~~~~iRis 395 (422)
T 3d6k_A 346 ----TGGYFISVDVVPG-----TASRVVELAKEAGIALTGAGSSFPLHN---------------------DPNNENIRLA 395 (422)
T ss_dssp ----SBSSCEEEEESTT-----CHHHHHHHHHHTTEECCCTTTTSGGGC---------------------CTTSCEEEEC
T ss_pred ----CcceEEEEECCCC-----CHHHHHHHHHHCCeEEEcCccccCCCC---------------------CCCCCeEEEe
Confidence 2355666666541 466788889999999998 44342100 0112389999
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhh
Q 037063 546 LGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 546 lg~~~t~eDv~~li~~l~~~l~~ 568 (588)
++. ++.+|++++++.|++++++
T Consensus 396 ~~~-~~~e~i~~~~~~l~~~l~~ 417 (422)
T 3d6k_A 396 PSL-PPVAELEVAMDGFATCVLM 417 (422)
T ss_dssp CSS-SCHHHHHHHHHHHHHHHHH
T ss_pred cCC-CCHHHHHHHHHHHHHHHHH
Confidence 998 8999999999999998765
No 161
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.87 E-value=2.9e-20 Score=196.40 Aligned_cols=319 Identities=13% Similarity=0.048 Sum_probs=203.2
Q ss_pred HHHHHHHHHH-HHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 179 ELESKIRKRI-MDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 179 ~~~~~~r~~i-a~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
...+++|+.+ ++++|. .+ .+++++|+|+|+.+++.++.+++||+|+ ....|++ . ...++..|++++++++
T Consensus 36 ~~~~~l~~~~~a~~~g~-~~--~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~-~----~~~~~~~G~~~~~v~~ 107 (377)
T 3ju7_A 36 PINQRFEQTIMSGFFQN-RG--AVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPA-T----PLAAIWCGLEPYFIDI 107 (377)
T ss_dssp HHHHHHHHHHHHHTSTT-CS--EEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTH-H----HHHHHHTTCEEEEECB
T ss_pred HHHHHHHHHHHHHHhCC-CC--eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHH-H----HHHHHHcCCEEEEEec
Confidence 4467999999 999993 22 3899999999999999987789999966 5566664 2 2344668999999999
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCc--ceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC--CCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKK--RGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK--DMDTLG 331 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~--t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~--d~~~l~ 331 (588)
++.++.+|+++|++++.. ++ |++|+ ++|++|...|+++| ++|+ +|++||+|++|..+. +...++
T Consensus 108 ~~~~~~~d~~~l~~~i~~-------~~~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g 176 (377)
T 3ju7_A 108 SIDDWYMDKTVLWDKIEE-------LKEEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYG 176 (377)
T ss_dssp CTTTCSBCHHHHHHHHHH-------HGGGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETT
T ss_pred CCccCCcCHHHHHHHHhc-------CCCCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEecc
Confidence 866788999999999831 34 88887 45679999999999 9999 999999999998762 112221
Q ss_pred CCCCCCcEEEecc--CccCCCCCCceEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCC-CCCc
Q 037063 332 LSLFKPDFLICSF--YKIFGENPSGFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFP-ESSI 407 (588)
Q Consensus 332 l~~~~~D~vv~S~--~K~~G~~P~G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~G-T~~~ 407 (588)
....|+.++|+ +|.+| +...|+++.++ ++.++++..... |... . . ...+.| ...+
T Consensus 177 --~~~~d~~~~S~~~~K~l~--~g~gG~~~~~~~~l~~~~~~~~~~--g~~~----~-----~------~~~~~g~~~~~ 235 (377)
T 3ju7_A 177 --QDFSGMIIYSFHATKPFG--IGEGGLIYSKNEEDIQRIKRMGNF--GFDT----N-----R------ECTMMGFNCKM 235 (377)
T ss_dssp --TTCSSEEEEECBTTSSSC--CBSCEEEEESCHHHHHHHHHHTBT--TBCT----T-----S------CBCSSCCBCCC
T ss_pred --CCCCcEEEEECCCCCcCC--CCCcEEEEECCHHHHHHHHHHHhc--CCCC----C-----C------ceeeccccCCC
Confidence 01146666665 69888 42456666665 344555443322 1100 0 0 000222 1122
Q ss_pred cchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEE-eCCCCCCCccc-EEEEEeecCCC
Q 037063 408 SGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRI-YGPKVMFDRGP-SLAFNVFDWNG 485 (588)
Q Consensus 408 ~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i-~~p~~~~~rg~-iv~f~~~~~~g 485 (588)
..+ . ...++..++ .++.+.++.+.+++++.+.|.++. ++++ +.+........ .+.+.+.+.
T Consensus 236 ~~~---~-aa~~~~~l~--~l~~~~~~~~~~~~~~~~~L~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-- 298 (377)
T 3ju7_A 236 SEY---A-AAIGIATMK--KWDDKLKERTRISEWYKQLLQSNG---------LMKKGWQLQKTEAVIQQFMPILCPEE-- 298 (377)
T ss_dssp CHH---H-HHHHHHHHH--THHHHHHHHHHHHHHHHHHHHHTT---------TTTTTCBCCCCSCBCCSSEEEECCTT--
T ss_pred CHH---H-HHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCC---------CccccccCCCCCcceEEEEEEEeCCh--
Confidence 222 1 112333333 357888888999999999998852 1100 11111111111 334444331
Q ss_pred CCcCHHHHHHHHHhCCcEecccc--ccCcc--ccc---chHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHH
Q 037063 486 TRIDPALVQKLADRHNISLSCGF--LQNIF--FSG---EYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRL 558 (588)
Q Consensus 486 ~~i~~~~v~~~l~~~gI~v~~G~--~c~~~--~~~---~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~l 558 (588)
.+.+.+.+.|.++||.++.+. .|+.. +.. ... .....+.++ .||++++...|.|||+++
T Consensus 299 --~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~-----------~l~lp~~~~~t~~di~~v 364 (377)
T 3ju7_A 299 --VRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDL-TRTNKIAKR-----------IVSLPLWEGMTKEIVEQI 364 (377)
T ss_dssp --SCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCC-HHHHHHHHH-----------EEEECCCTTCCHHHHHHH
T ss_pred --hhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCC-HHHHHHHhC-----------EEECCCCCCCCHHHHHHH
Confidence 347889999999999998876 45431 110 000 011122222 899999999999999999
Q ss_pred HHHHHHhhhh
Q 037063 559 WAFVSRFLDA 568 (588)
Q Consensus 559 i~~l~~~l~~ 568 (588)
++.|++++..
T Consensus 365 ~~~l~~~~~~ 374 (377)
T 3ju7_A 365 VICLGQKVVS 374 (377)
T ss_dssp HHHHTC----
T ss_pred HHHHHHHHhc
Confidence 9999887654
No 162
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.87 E-value=6.9e-21 Score=201.82 Aligned_cols=324 Identities=10% Similarity=0.051 Sum_probs=214.0
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|+|.++. |+.++.+++++.+.+.. ..+. + + . + ..+..++
T Consensus 38 ~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~--~~~~-~--------------------~---~--~---~~~~~~~ 86 (397)
T 2ord_A 38 KGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEK--LIHC-S--------------------N---L--F---WNRPQME 86 (397)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHH--CSCC-C--------------------T---T--S---EEHHHHH
T ss_pred CCCEEEECCccccccccCCCCHHHHHHHHHHHHh--cccC-c--------------------c---c--c---CCHHHHH
Confidence 46779998654 44578888888666532 1111 0 0 0 1 1466789
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC------CC-CeEE-EcCCCchhHHHHHHHHHHhcCCE-----
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY------SN-PRLL-TVYDHENEAAALMIESSKKRGAR----- 250 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~------~g-d~ll-~~~e~~s~~~~~~~~~a~~~G~~----- 250 (588)
+++++++++|. + .|+||+|+|+|+.+++.++ .. +| ++|+ ....||.....+ ++..|.+
T Consensus 87 l~~~la~~~g~--~--~v~~~~gg~~a~~~al~~~-~~~~~~~~~~~~~vi~~~~~yh~~~~~~----~~~~g~~~~~~~ 157 (397)
T 2ord_A 87 LAELLSKNTFG--G--KVFFANTGTEANEAAIKIA-RKYGKKKSEKKYRILSAHNSFHGRTLGS----LTATGQPKYQKP 157 (397)
T ss_dssp HHHHHHHTTTS--C--EEEEESSHHHHHHHHHHHH-HHHHHHHCTTCCEEEEEBTCCCCSSHHH----HHHSBCHHHHGG
T ss_pred HHHHHHHhcCC--C--eEEEeCCHHHHHHHHHHHH-HHHhhcCCCCCceEEEEcCCcCCCchhh----hhccCChhhccc
Confidence 99999999984 3 4999999999999998876 32 44 5654 555666533322 2334554
Q ss_pred -------EEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCc-cC---CHHHH-HHHHHcCcEEEEe
Q 037063 251 -------VSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGA-RY---SYMWM-SVAAEKGWHVLLD 318 (588)
Q Consensus 251 -------v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~-~~---pl~~I-~~a~~~g~~vvvD 318 (588)
+..++.+ |+++|+++++ +++++|++++++|+||. .+ ++++| ++|+++|+++|+|
T Consensus 158 ~~p~~~~~~~~~~~------d~~~l~~~l~--------~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~D 223 (397)
T 2ord_A 158 FEPLVPGFEYFEFN------NVEDLRRKMS--------EDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFD 223 (397)
T ss_dssp GCSCCTTEEEECTT------CHHHHHHHCC--------TTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEE
T ss_pred cCCCCCCeeEecCC------CHHHHHHHhh--------cCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 6666542 7899999887 68999999999999999 55 45667 8899999999999
Q ss_pred CCCcC-CCCCCCCCCC--CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccc
Q 037063 319 ATALG-SKDMDTLGLS--LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLD 395 (588)
Q Consensus 319 aa~~~-~~d~~~l~l~--~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~ 395 (588)
+++.. ..+-..+.+. ...+|++ +++|.+|. +.++|+++++++++ .+.+...+.
T Consensus 224 e~~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~r~G~~~~~~~~~-~l~~~~~~~-------------------- 279 (397)
T 2ord_A 224 EVQCGMGRTGKLFAYQKYGVVPDVL--TTAKGLGG-GVPIGAVIVNERAN-VLEPGDHGT-------------------- 279 (397)
T ss_dssp CTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSCCEEEEECSTTC-CCCTTSSCC--------------------
T ss_pred ecccCCccCccchhhhhhCCCCCee--eeccccCC-CcCeEEEEEchHhc-ccCCCCcCC--------------------
Confidence 99862 1111111111 1127866 66898883 56799999998875 443321110
Q ss_pred ccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccE
Q 037063 396 ESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPS 475 (588)
Q Consensus 396 ~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~i 475 (588)
.| +.+... .+++.++|+.+.+ +++.++.+++++++.+.|.++.. +.+.+.... ..+.+
T Consensus 280 --~~----~~~~~~---~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~-----~~~~~~~~~-----~~g~~ 337 (397)
T 2ord_A 280 --TF----GGNPLA---CRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKE-----EYDVVADVR-----GMGLM 337 (397)
T ss_dssp --SS----TTCHHH---HHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHH-----HCTTEEEEE-----EETTE
T ss_pred --CC----CCCHHH---HHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHH-----hCCceEEEE-----EEeEE
Confidence 00 112222 2444566666543 56778888888888888877510 022222111 24678
Q ss_pred EEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHH
Q 037063 476 LAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDT 555 (588)
Q Consensus 476 v~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv 555 (588)
+.|.+.+. .+...+.+.|.++||.++.|. . ..||+|+++.++.||+
T Consensus 338 ~~~~~~~~----~~~~~l~~~l~~~gi~v~~~~----------------------------~--~~iRis~~~~~~~e~i 383 (397)
T 2ord_A 338 IGIQFREE----VSNREVATKCFENKLLVVPAG----------------------------N--NTIRFLPPLTVEYGEI 383 (397)
T ss_dssp EEEEECTT----SCHHHHHHHHHHTTEECEEET----------------------------T--TEEEECCCTTCCHHHH
T ss_pred EEEEECCh----HHHHHHHHHHHHCCCEEccCC----------------------------C--CEEEEECCcCCCHHHH
Confidence 88877541 346677777777999988651 1 1899999999999999
Q ss_pred HHHHHHHHHhhh
Q 037063 556 YRLWAFVSRFLD 567 (588)
Q Consensus 556 ~~li~~l~~~l~ 567 (588)
+++++.|+++++
T Consensus 384 ~~~~~~l~~~l~ 395 (397)
T 2ord_A 384 DLAVETLKKVLQ 395 (397)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998875
No 163
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.87 E-value=3.1e-21 Score=205.71 Aligned_cols=311 Identities=10% Similarity=0.026 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
...+.+|+.+++++|++. ..++++|+|+|+.+++.++ +++||+|++ ...|++....+........+.+++.++.+
T Consensus 78 ~~~~~a~~~~~~~~~~~~---~~v~~~~Gs~a~~~al~~~-~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 153 (425)
T 3ecd_A 78 EVEALAIERVKRLFNAGH---ANVQPHSGAQANGAVMLAL-AKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVS 153 (425)
T ss_dssp HHHHHHHHHHHHHHTCSE---EECCCSSHHHHHHHHHHHH-CCTTCEEEEECC------------------CEEEEECCC
T ss_pred HHHHHHHHHHHHHhCCCC---ceeecCchHHHHHHHHHHc-cCCCCEEEEcccccccceecchhhhhcccceeeeecCCC
Confidence 455667799999999863 3567899999999999998 899999664 44554312122111111223355566665
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCC--CCCCCCCCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSK--DMDTLGLSL 334 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~--d~~~l~l~~ 334 (588)
..++.+|+++|++++.+ +++++|++++++| |...++++| ++|+++|+++|+|++|..+. .-..... .
T Consensus 154 ~~~~~~d~~~l~~~i~~-------~~~~~v~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~-~ 223 (425)
T 3ecd_A 154 RDTMLIDYDQVEALAQQ-------HKPSLIIAGFSAY--PRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANP-V 223 (425)
T ss_dssp TTTSSCCHHHHHHHHHH-------HCCSEEEEECSCC--CSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCG-G
T ss_pred cccCccCHHHHHHHHhh-------cCCcEEEEccccC--CCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCc-h
Confidence 44578999999999972 3688999987666 788999999 99999999999999975531 0011110 1
Q ss_pred CCCcEEEeccCccCCCCCCceEEEEEeC-cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhH
Q 037063 335 FKPDFLICSFYKIFGENPSGFGCLFVKK-SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSK 413 (588)
Q Consensus 335 ~~~D~vv~S~~K~~G~~P~G~G~L~v~~-~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~ 413 (588)
..+|++++|+||+++. |. .|+++.++ .+.+.+......+ ..|+++...+
T Consensus 224 ~~~di~~~s~sK~l~g-~~-~g~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~--- 273 (425)
T 3ecd_A 224 EHAHVVTSTTHKTLRG-PR-GGFVLTNDEEIAKKINSAVFPG-------------------------LQGGPLMHVI--- 273 (425)
T ss_dssp GTCSEEEEESSGGGCC-CS-CEEEEESCHHHHHHHHHHHC------------------------------CCCHHHH---
T ss_pred hcCcEEEecCCcccCC-CC-cEEEEeCCHHHHHHHHhhhCcc-------------------------ccCCccHHHH---
Confidence 1279999999997752 65 59999885 4444443322110 1122222222
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHH
Q 037063 414 LVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALV 493 (588)
Q Consensus 414 ~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v 493 (588)
+++..++......+++.+.++.+.+++++.+.|.++ +++++.+. ..+.++.+.+.+.. ++...+
T Consensus 274 ~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~~---~~~~~~~~~~~~~~---~~~~~~ 337 (425)
T 3ecd_A 274 AGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG----------GVDLVTGG---TDNHLLLVDLRPKG---LKGAQV 337 (425)
T ss_dssp HHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT----------TCEEGGGS---CSSSEEEEECGGGT---CCHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC----------CCeeccCC---CCceEEEEEeCCCC---CCHHHH
Confidence 344455544333346788999999999999999884 35565432 24567777765321 457788
Q ss_pred HHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCC----HHHHHHHHHHHHHhhhhh
Q 037063 494 QKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTN----FEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 494 ~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t----~eDv~~li~~l~~~l~~~ 569 (588)
.+.|.++||.++.+.. ++.... ..+...+|++++.+++ .+||+++++.|+++++..
T Consensus 338 ~~~l~~~gi~v~~~~~--p~~~~~------------------~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 338 EQALERAGITCNKNGI--PFDPEK------------------PTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp HHHHHHTTEECEECCC--TTCSSC------------------TTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCEeccccc--CCCCCC------------------CCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 8999999999985531 110000 0122389999766655 999999999999998764
No 164
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.87 E-value=4.6e-21 Score=204.63 Aligned_cols=297 Identities=10% Similarity=0.011 Sum_probs=192.8
Q ss_pred HHHHHHHHHh----CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccC
Q 037063 183 KIRKRIMDFM----NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAW 258 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~ 258 (588)
++|+.+++++ +.+. ...|++|+|+|+|+.+++.++ +++||+|++....+... ...++..|++++.++++.
T Consensus 84 ~lr~~ia~~~~~~~~~~~-~~~i~~t~g~~~al~~~~~~l-~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~v~~~~ 157 (418)
T 3rq1_A 84 DFLCAAEKECFGNFRPEG-HIRSIATAGGTGGIHHLIHNY-TEPGDEVLTADWYWGAY----RVICSDTGRTLVTYSLFD 157 (418)
T ss_dssp HHHHHHHHHHHGGGCCSS-EEEEEEESHHHHHHHHHHHHH-SCTTCEEEEESSCCTHH----HHHHHHTTCEEEEECSBC
T ss_pred HHHHHHHHHHhcccCccc-cccEEECCchHHHHHHHHHHh-cCCCCEEEECCCCchhH----HHHHHHcCCEEEEEeeeC
Confidence 5677777755 3321 125999999999999999999 89999977655443322 345577899999999864
Q ss_pred CCCccCHHHHHHHHhhhccccCCCcce-EEEEeCC-CCCCCccCCHHHH-HH---HH------HcCcEEEEeCCCcC-CC
Q 037063 259 PNLRIHSGKLMKKIVGKRKKKKKKKRG-LFVFPLQ-SKVTGARYSYMWM-SV---AA------EKGWHVLLDATALG-SK 325 (588)
Q Consensus 259 ~~~~i~~e~l~~~i~~~~~~~~~~~t~-Lv~~~~~-sn~tG~~~pl~~I-~~---a~------~~g~~vvvDaa~~~-~~ 325 (588)
+++.+|+++|++++++ ...++++ +++++++ +|+||..+|.+++ ++ |+ ++|+++|+|+++.. ..
T Consensus 158 ~~~~~d~~~l~~~l~~----~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~ 233 (418)
T 3rq1_A 158 EHNNFNHEAFQNRVNE----LAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSG 233 (418)
T ss_dssp TTSSBCHHHHHHHHHH----HHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSS
T ss_pred CCCCcCHHHHHHHHHH----hhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccC
Confidence 5678999999999972 0001455 8889989 9999999998886 54 44 89999999999532 10
Q ss_pred C---CCCC-C-CCCCCCc---EEEeccCccCCCCCCceEEEEE---eCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 326 D---MDTL-G-LSLFKPD---FLICSFYKIFGENPSGFGCLFV---KKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 326 d---~~~l-~-l~~~~~D---~vv~S~~K~~G~~P~G~G~L~v---~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
+ ...+ . ......| +++.|++|.+|.+..++|++++ ++++++.+....... ..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-~~---------------- 296 (418)
T 3rq1_A 234 EKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKST-SR---------------- 296 (418)
T ss_dssp CHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHH-HH----------------
T ss_pred ChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHH-Hh----------------
Confidence 0 0000 0 1111234 7778999988853456899998 777776654322100 00
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHH---HHh--CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCC
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDHA---DAL--GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVM 469 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~l---~~~--G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~ 469 (588)
. ...+.+..+. .++..+|+.. +.+ .++++.++.+..++++.+.|.++ | ++++.|
T Consensus 297 ----~-~~~~~~~~~~---~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g---~~~~~~--- 355 (418)
T 3rq1_A 297 ----A-TWSNICRPAM---RTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-------G---LPMLPY--- 355 (418)
T ss_dssp ----H-HTSSCCHHHH---HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------T---CCCCCC---
T ss_pred ----h-ccCCCchHHH---HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------C---CCCCCC---
Confidence 0 0001121111 2333333211 000 13456677788888888888875 2 333332
Q ss_pred CCcccEEEE-EeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCC
Q 037063 470 FDRGPSLAF-NVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGC 548 (588)
Q Consensus 470 ~~rg~iv~f-~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~ 548 (588)
.++++.+ .+. +...+.+.|.++||.+++| .+ .||+|++
T Consensus 356 --~~~~~~~~~~~-------~~~~~~~~l~~~gi~v~~g-----------------------------~~--~iRis~~- 394 (418)
T 3rq1_A 356 --RGGFFITIPTD-------SANAICEELKKEHIYVIAL-----------------------------AN--GIRIAAC- 394 (418)
T ss_dssp --CSSSEEEEECT-------THHHHHHHHHHTTEECEEC-----------------------------SS--EEEEEGG-
T ss_pred --CceEEEEcCCC-------CHHHHHHHHHhCCEEEecC-----------------------------CC--CeEEEEe-
Confidence 3444433 221 3667778889999999876 12 7999987
Q ss_pred CCCHHHHHHHHHHHHHhhhh
Q 037063 549 LTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 549 ~~t~eDv~~li~~l~~~l~~ 568 (588)
..+.+|++++++.|++++++
T Consensus 395 ~~~~~~i~~~~~~l~~~l~~ 414 (418)
T 3rq1_A 395 GIPKCQMTGLAEKIYNAMKS 414 (418)
T ss_dssp GSCHHHHTTHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHH
Confidence 46899999999999998864
No 165
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.87 E-value=2.3e-20 Score=199.43 Aligned_cols=345 Identities=11% Similarity=0.050 Sum_probs=216.6
Q ss_pred CCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|+|.++ .|+.++.+++++.+.+.. ..+. .. .++ ..+...+
T Consensus 39 ~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~--~~~~----------------------~~----~~~--~~~~~~~ 88 (426)
T 1sff_A 39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKK--LSHT----------------------CF----QVL--AYEPYLE 88 (426)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTT--CSCC----------------------CT----TTE--ECHHHHH
T ss_pred CCCEEEEcccChhhcccCCCCHHHHHHHHHHHHh--CCCc----------------------cc----ccc--CCHHHHH
Confidence 4567888753 345678888888666532 1111 00 011 1355679
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHH---hCCCCCCCeEE-EcCCCchhHHHHHHHHHHhcCC----------
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAE---SYPFYSNPRLL-TVYDHENEAAALMIESSKKRGA---------- 249 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~---s~~~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~---------- 249 (588)
+|+.|+++++.+. ...|+||+|+++|+.+++. .+ .++| +|+ ....||.....++ ...|.
T Consensus 89 l~~~la~~~~~~~-~~~v~~~~g~~~a~~~~~~~a~~~-~~~~-~vi~~~p~y~~~~~~~~----~~~g~~~~~~~~~~~ 161 (426)
T 1sff_A 89 LCEIMNQKVPGDF-AKKTLLVTTGSEAVENAVKIARAA-TKRS-GTIAFSGAYHGRTHYTL----ALTGKVNPYSAGMGL 161 (426)
T ss_dssp HHHHHHHHSSCSS-CEEEEEESSHHHHHHHHHHHHHHH-HTCC-EEEEETTCCCCSSHHHH----HHSSCCTTTTTTSCC
T ss_pred HHHHHHHhCCccc-ccEEEEeCchHHHHHHHHHHHHHh-hCCC-eEEEECCCcCCCchHhh----hhcCCccccccccCC
Confidence 9999999993232 1359999999999999987 55 4555 644 5566665333232 22233
Q ss_pred ---EEEEEeccC----CCCccCHHHHHHHHhhhccccCCCcceEEEEe-CCCCCCCccCC----HHHH-HHHHHcCcEEE
Q 037063 250 ---RVSSAEFAW----PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFP-LQSKVTGARYS----YMWM-SVAAEKGWHVL 316 (588)
Q Consensus 250 ---~v~~v~~~~----~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~-~~sn~tG~~~p----l~~I-~~a~~~g~~vv 316 (588)
.++.++++. .++.+|.++|++++++ ....+++++|++. .++| ||.+.+ +++| ++|+++|++||
T Consensus 162 ~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~---~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li 237 (426)
T 1sff_A 162 MPGHVYRALYPCPLHGISEDDAIASIHRIFKN---DAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLI 237 (426)
T ss_dssp CCSSEEEECCCBGGGTBCHHHHHHHHHHHHHH---TCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCCCcEEeCCCccccccchHHHHHHHHHHHHh---ccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 277777752 1234788999998862 0011357788884 4566 998887 8888 99999999999
Q ss_pred EeCCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccc
Q 037063 317 LDATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELET 393 (588)
Q Consensus 317 vDaa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~ 393 (588)
+|+++. ++.. ...++.....+|++ |++|.+|. +..+|++++++++++.+.....+ +
T Consensus 238 ~De~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~-GlriG~~~~~~~~~~~l~~~~~~--~---------------- 296 (426)
T 1sff_A 238 ADEVQSGAGRTGTLFAMEQMGVAPDLT--TFAKSIAG-GFPLAGVTGRAEVMDAVAPGGLG--G---------------- 296 (426)
T ss_dssp EECTTTTTTTTSSSSGGGGTTSCCSEE--EECGGGGT-SSCCEEEEEEHHHHTTSCTTSBC--C----------------
T ss_pred EechhhccCcccchhhhhhcCCCCCEE--EEcccccC-CCceEEEEEcHHHHhhhccCCcC--c----------------
Confidence 999976 2211 11111112237766 77899982 23379999999887766532111 0
Q ss_pred ccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc
Q 037063 394 LDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG 473 (588)
Q Consensus 394 ~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg 473 (588)
.. +.+... .+++.++|+++.+ +.+.++++.+++++.+.|.++... .+.+..+. ..|
T Consensus 297 -------~~-~~~~~~---~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~-----~~~~~~~~-----~~g 352 (426)
T 1sff_A 297 -------TY-AGNPIA---CVAALEVLKVFEQ---ENLLQKANDLGQKLKDGLLAIAEK-----HPEIGDVR-----GLG 352 (426)
T ss_dssp -------SS-SSCHHH---HHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHT-----CTTEEEEE-----EET
T ss_pred -------CC-CCCHHH---HHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEE-----EEE
Confidence 00 112222 2455677787765 346778888888888888775200 23333221 236
Q ss_pred cEEEEEeecCC----CCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC
Q 037063 474 PSLAFNVFDWN----GTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL 549 (588)
Q Consensus 474 ~iv~f~~~~~~----g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~ 549 (588)
.++.+.+.+.. ....+...+.+.|.++||.+++|... . .+||+++++.
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~--------------------------~--~~iRi~~~~~ 404 (426)
T 1sff_A 353 AMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPY--------------------------Y--NVLRILVPLT 404 (426)
T ss_dssp TEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEESTT--------------------------S--CEEEECCCTT
T ss_pred EEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCCC--------------------------C--CEEEEECCcc
Confidence 78888874310 00123455666677789999876321 1 2899999999
Q ss_pred CCHHHHHHHHHHHHHhhhh
Q 037063 550 TNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 550 ~t~eDv~~li~~l~~~l~~ 568 (588)
++.+|++++++.|++++++
T Consensus 405 ~~~~~i~~~~~~l~~~l~~ 423 (426)
T 1sff_A 405 IEDAQIRQGLEIISQCFDE 423 (426)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999988754
No 166
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.87 E-value=4.6e-20 Score=202.04 Aligned_cols=309 Identities=13% Similarity=0.052 Sum_probs=200.2
Q ss_pred HHHHHHHHHh----CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccC
Q 037063 183 KIRKRIMDFM----NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAW 258 (588)
Q Consensus 183 ~~r~~ia~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~ 258 (588)
++|+.|++++ |.+.+...|++|+|+++|+.+++.++..++||+|+++...+... ...++..|++++.++++.
T Consensus 138 ~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~~~~~~ 213 (500)
T 3tcm_A 138 GLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLY----SASIALHGGALVPYYLNE 213 (500)
T ss_dssp HHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHH----HHHHHHTTCEEEEEECBT
T ss_pred HHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhH----HHHHHHcCCEEEEEeccc
Confidence 4555555554 53322335999999999999999998337999976544433322 344566899999999874
Q ss_pred C-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCcCC-C----CCC
Q 037063 259 P-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATALGS-K----DMD 328 (588)
Q Consensus 259 ~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~~~-~----d~~ 328 (588)
. ++.+|+++|+++|+.. +....++++|++.+++||||..+|.+.+ ++|+++|+++++|.+.... . ...
T Consensus 214 ~~~~~~d~~~l~~~l~~~--~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~ 291 (500)
T 3tcm_A 214 STGWGLETSDVKKQLEDA--RSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFH 291 (500)
T ss_dssp TTTSBCCHHHHHHHHHHH--HHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCC
T ss_pred ccCCCCCHHHHHHHHHHH--HhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCC
Confidence 3 3479999999999821 1112378999999999999999997765 5599999999999985432 1 011
Q ss_pred -------CCCCCCCCC-cEEEeccCccC-CCCCCceEEEEE---eCcchhcccCCCCCCCceEeeecCCCcccccccccc
Q 037063 329 -------TLGLSLFKP-DFLICSFYKIF-GENPSGFGCLFV---KKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDE 396 (588)
Q Consensus 329 -------~l~l~~~~~-D~vv~S~~K~~-G~~P~G~G~L~v---~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~ 396 (588)
.++.....+ .+++.|++|.| |.+..++|++++ ++++++.+......
T Consensus 292 s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~---------------------- 349 (500)
T 3tcm_A 292 SFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASV---------------------- 349 (500)
T ss_dssp CHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHT----------------------
T ss_pred cHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhc----------------------
Confidence 111101112 25667999977 732345799998 77776655422100
Q ss_pred cccccCCCCCccchhhHHHHHHHHH-----------HHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeC
Q 037063 397 SSQSKFPESSISGVSSKLVECKGLD-----------HADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYG 465 (588)
Q Consensus 397 ~~f~e~GT~~~~~~~~~~al~~aL~-----------~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~ 465 (588)
..+++..+. +++..+++ +.+. ++.+.++++..++++.+.|.++ ++++++.
T Consensus 350 -----~~~~~~~~q---~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~l~~~L~~~---------~g~~~~~ 410 (500)
T 3tcm_A 350 -----NLCSNITGQ---ILASLVMNPPKASDESYASYKAE--KDGILASLARRAKALEHAFNKL---------EGITCNE 410 (500)
T ss_dssp -----TCCCCHHHH---HHHHHHHSCCCSSSTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTS---------TTEECCC
T ss_pred -----ccCCCHHHH---HHHHHHhcCccccchhHHHHHHH--HHHHHHHHHHHHHHHHHHHhcC---------CCcEEec
Confidence 011222221 23334442 2233 4777888889999999999884 6787765
Q ss_pred CCCCCCcccEEEEE-eecCCC-------CCcCHHH--HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCC
Q 037063 466 PKVMFDRGPSLAFN-VFDWNG-------TRIDPAL--VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNET 535 (588)
Q Consensus 466 p~~~~~rg~iv~f~-~~~~~g-------~~i~~~~--v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~ 535 (588)
| .++++.|. +....+ ..+..+. +.++|++.||.+.+|..|...
T Consensus 411 ~-----~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~---------------------- 463 (500)
T 3tcm_A 411 A-----EGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQV---------------------- 463 (500)
T ss_dssp C-----CBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCC----------------------
T ss_pred C-----CeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCC----------------------
Confidence 4 45555542 221000 0011222 458888899999998766310
Q ss_pred cCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 536 RSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 536 ~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.|...||+|++ .+.+|++++++.|++++++
T Consensus 464 -~g~~~iRis~~--~~~e~i~~~i~~l~~~~~~ 493 (500)
T 3tcm_A 464 -PGTWHFRCTIL--PQEDKIPAVISRFTVFHEA 493 (500)
T ss_dssp -TTCCBEEEESC--SCTTTHHHHHHHHHHHHHH
T ss_pred -CCCCEEEEEEC--CCHHHHHHHHHHHHHHHHH
Confidence 22338999998 7889999999999998764
No 167
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.87 E-value=6.1e-21 Score=202.64 Aligned_cols=342 Identities=14% Similarity=0.090 Sum_probs=208.0
Q ss_pred CCeeeecCCCCC-CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHG-LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRI 188 (588)
Q Consensus 110 ~~~vyLD~a~~g-l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~i 188 (588)
++.++|+.+..+ +.++.+.+++.+.+... .++.. . ..|+. ..-..++|+.|
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~~~~---------------------~---~~y~~--~~g~~~lr~~l 84 (400)
T 3asa_A 33 HTVINLSIGDTTQPLNASVAEAFASSIARL--SSPTT---------------------C---RGYGP--DFGLPALRQKL 84 (400)
T ss_dssp SCCEECSSCCCCCCCCHHHHHHHHHHHHHH--TSSSC---------------------C---CCCCC--TTCCHHHHHHH
T ss_pred CceEeccCCCCCCCCCHHHHHHHHHHHhcc--ccccc---------------------c---cCCCC--CCCCHHHHHHH
Confidence 567889888765 45677777775554221 11100 0 00111 11135899999
Q ss_pred HHH--hC-CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEc-CCCchhHHHHHHHHHHhcCCE-EEEEeccCCCCcc
Q 037063 189 MDF--MN-ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTV-YDHENEAAALMIESSKKRGAR-VSSAEFAWPNLRI 263 (588)
Q Consensus 189 a~~--lg-a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~-v~~v~~~~~~~~i 263 (588)
+++ .| ++++ .|++|+|+++++.+++.. +++||+|++. ..|+. . ...++..|++ ++.++.+ +++.+
T Consensus 85 a~~l~~g~~~~~--~v~~~~G~~~al~~~~~~--~~~gd~Vl~~~p~y~~-~----~~~~~~~g~~~~~~~~~~-~~~~~ 154 (400)
T 3asa_A 85 SEDFYRGFVDAK--EIFISDGAKVDLFRLLSF--FGPNQTVAIQDPSYPA-Y----LDIARLTGAKEIIALPCL-QENAF 154 (400)
T ss_dssp HHTTSTTSSCGG--GEEEESCHHHHHHHHHHH--HCSSCEEEEEESCCHH-H----HHHHHHTTCSEEEEEECC-GGGTT
T ss_pred HHHHHcCCCCHH--HEEEccChHHHHHHHHHH--cCCCCEEEECCCCcHH-H----HHHHHHcCCcceEecccc-hhcCc
Confidence 999 47 5554 499999999999997754 4789997654 44443 2 3445667998 9999886 22222
Q ss_pred CHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCc-CCCC-CCCCCCCC---
Q 037063 264 HSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATAL-GSKD-MDTLGLSL--- 334 (588)
Q Consensus 264 ~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~-~~~d-~~~l~l~~--- 334 (588)
.. ++++ .+++++|++++++|+||.++|.++ | ++|+++|+++|+|+++. +..+ .....+..
T Consensus 155 ~~-~l~~----------~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 223 (400)
T 3asa_A 155 FP-EFPE----------DTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPD 223 (400)
T ss_dssp CC-CCCT----------TCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTT
T ss_pred cc-Chhh----------ccCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCC
Confidence 21 1111 046889999999999999999665 5 78999999999999976 3210 00111111
Q ss_pred -CCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhH
Q 037063 335 -FKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSK 413 (588)
Q Consensus 335 -~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~ 413 (588)
...++++.|++|.+|.+..++|++++++++...+. . ... .+..... .. ..++.+....
T Consensus 224 ~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~----~--~~~----------~~~~~~~-~~-~~~~~~~~~~--- 282 (400)
T 3asa_A 224 ARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADG----H--FVI----------QDWERFL-ST-TFNGASIPAQ--- 282 (400)
T ss_dssp GGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTS----C--BHH----------HHHHHHH-HH-HCCCCCHHHH---
T ss_pred CCCceEEEecchhhcCCcchheeEEeeChhhccchh----h--hHH----------HHHHHHh-cc-CccCCChHHH---
Confidence 12458899999999842334899999887732111 0 000 0000000 00 1122333222
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEE-eecCCCCCcCHH-
Q 037063 414 LVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFN-VFDWNGTRIDPA- 491 (588)
Q Consensus 414 ~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~-~~~~~g~~i~~~- 491 (588)
+++..+|+ ...++++.++++.+++++.+.|.++ +++++.+ ..+.++.+. +++ + ++..
T Consensus 283 ~a~~~~l~---~~~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~----~~~~~~~~~~~~~--~--~~~~~ 341 (400)
T 3asa_A 283 EAGVAGLS---ILPQLEAIHYYRENSDLLRKALLAT----------GFEVFGG----EHAPYLWVKPTQA--N--ISDRD 341 (400)
T ss_dssp HHHHHHHH---HTTTCHHHHHHHHHHHHHHHHHHHT----------TCEEEEC----SSSSEEEEECCCT--T--CCTTT
T ss_pred HHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHC----------CCeeeCC----CCceEEEEeccCC--C--CCHHH
Confidence 23334443 3246788889999999999999884 3455554 235666666 542 1 2333
Q ss_pred HHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 492 LVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 492 ~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.+.++++++||.+++|..|.+ .+.++||+| ++++.||++++++.|+++++.
T Consensus 342 ~~~~l~~~~gv~v~~g~~f~~------------------------~~~~~iRis--~~~~~e~i~~~l~~l~~~~~~ 392 (400)
T 3asa_A 342 LFDFFLREYHIAITPGIGFGR------------------------SGSGFVRFS--SLGKREDILAACERLQMAPAL 392 (400)
T ss_dssp HHHHHHHHHSEECEEGGGGCG------------------------GGTTCEEEE--CCSCHHHHHHHHHHHHC----
T ss_pred HHHHHHHhCCEEEeChhHhCC------------------------CCCCEEEEE--eeCCHHHHHHHHHHHHHHHHh
Confidence 345566777999999866531 111289999 478999999999999988754
No 168
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.87 E-value=2.9e-20 Score=200.80 Aligned_cols=319 Identities=12% Similarity=0.028 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccC
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAW 258 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~ 258 (588)
....++|+.|+++++.+ .++||+|+|+|+.+++.++ +++|| |+....|+... ...++..|++++.++++.
T Consensus 75 ~~~~~l~~~la~~~~~~----~~~~~~~gt~a~~~al~~l-~~~gd-i~~~~~~~~~~----~~~~~~~G~~~~~v~~~~ 144 (456)
T 2ez2_A 75 ENFYHLERTVQELFGFK----HIVPTHQGRGAENLLSQLA-IKPGQ-YVAGNMYFTTT----RYHQEKNGAVFVDIVRDE 144 (456)
T ss_dssp HHHHHHHHHHHHHHCCS----EEEEESSHHHHHHHHHHHH-CCTTC-EEEESSCCHHH----HHHHHHTTCEEEECBCGG
T ss_pred hhHHHHHHHHHHHhCCC----cEEEeCCcHHHHHHHHHHh-CCCCC-Eeccccccchh----HHHHHHcCCEEEEecccc
Confidence 34568999999999984 4999999999999999998 89999 87777774422 234466899999998862
Q ss_pred C---------CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCC-CCCccCC---HHHH-HHHHHcCcEEEEeCCCcCC
Q 037063 259 P---------NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSK-VTGARYS---YMWM-SVAAEKGWHVLLDATALGS 324 (588)
Q Consensus 259 ~---------~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn-~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~ 324 (588)
. ++.+|+++|+++|+.. ...+.++|++++++| +||..+| +++| ++|+++|+++|+|+++..+
T Consensus 145 ~~~~~~~~~~~~~~d~~~l~~~i~~~----t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g 220 (456)
T 2ez2_A 145 AHDAGLNIAFKGDIDLKKLQKLIDEK----GAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVE 220 (456)
T ss_dssp GGCTTCCCSCTTCBCHHHHHHHHHHH----CGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHH
T ss_pred cccccccccccCCCCHHHHHHHHHhc----cccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEcccccc
Confidence 1 2578999999999720 012348999998988 9999998 7788 9999999999999997752
Q ss_pred ---------CCCCCCCC------CCCCCcEEEeccCccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcc
Q 037063 325 ---------KDMDTLGL------SLFKPDFLICSFYKIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEI 388 (588)
Q Consensus 325 ---------~d~~~l~l------~~~~~D~vv~S~~K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~ 388 (588)
.......+ ....+|++++|++|+++. | ..|+++.+ +++++.+........+.
T Consensus 221 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~-~-~gG~~~~~~~~~~~~~~~~~~~~~~~---------- 288 (456)
T 2ez2_A 221 NAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLV-N-IGGFLCMNDDEMFSSAKELVVVYEGM---------- 288 (456)
T ss_dssp HHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCC-S-SCEEEEESCHHHHHHHHHHHHHHTCC----------
T ss_pred ccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCC-C-ceeEEEECCHHHHHHHHHHHhhccCc----------
Confidence 11111110 001279999999998773 4 46888884 56665554321100000
Q ss_pred cccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCC
Q 037063 389 IELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKV 468 (588)
Q Consensus 389 ~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~ 468 (588)
. ..+..+...+ .++ ++..++.+. +...++.+.+.+++.+.|.++ +++++.|
T Consensus 289 ---------~--~~~~~~~~~~---~a~--a~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~----------g~~~~~p-- 339 (456)
T 2ez2_A 289 ---------P--SYGGLAGRDM---EAM--AIGLREAMQ-YEYIEHRVKQVRYLGDKLKAA----------GVPIVEP-- 339 (456)
T ss_dssp ---------T--TTTTCCHHHH---HHH--HHHHHHHTC-HHHHHHHHHHHHHHHHHHHHT----------TCCBCSS--
T ss_pred ---------c--cccCcchhHH---HHH--HHHHHHHhH-HHHHHHHHHHHHHHHHHHhcC----------CCccccC--
Confidence 0 0111111121 221 333334433 456677788889999999874 2333343
Q ss_pred CCCcccEEEEEeec----CCCCCcCHHHHHHHH-HhCCcEec-cccccCcccccchHHHHHHHHhhhcCCCCCcCCccEE
Q 037063 469 MFDRGPSLAFNVFD----WNGTRIDPALVQKLA-DRHNISLS-CGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVV 542 (588)
Q Consensus 469 ~~~rg~iv~f~~~~----~~g~~i~~~~v~~~l-~~~gI~v~-~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~v 542 (588)
..+..+.+.+.. .+...+....+.+.| .++||.+. .|.+|.+.. ..+ .. ....+...|
T Consensus 340 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~-~~~--------g~-----~~~~~~~~i 403 (456)
T 2ez2_A 340 --VGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRN-NVT--------GE-----HHRPKLETV 403 (456)
T ss_dssp --CCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBC-TTT--------CS-----BCCCSCCEE
T ss_pred --CCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccC-ccc--------cc-----cccCCCCeE
Confidence 235555555531 111111112224334 78899864 354432100 000 00 000122389
Q ss_pred EEecCCC-CCHHHHHHHHHHHHHhhhh
Q 037063 543 TAALGCL-TNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 543 RvSlg~~-~t~eDv~~li~~l~~~l~~ 568 (588)
|+|++.. ++.|||+++++.|++++++
T Consensus 404 Ris~~~~~~t~e~i~~~~~~l~~~l~~ 430 (456)
T 2ez2_A 404 RLTIPRRVYTYAHMDVVADGIIKLYQH 430 (456)
T ss_dssp EEECCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 9999987 8999999999999998875
No 169
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.86 E-value=4.4e-21 Score=207.78 Aligned_cols=315 Identities=10% Similarity=0.038 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC----CCCe---EEEcCCCchhHHHHHHHHHHhcCCEEE
Q 037063 180 LESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY----SNPR---LLTVYDHENEAAALMIESSKKRGARVS 252 (588)
Q Consensus 180 ~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~----~gd~---ll~~~e~~s~~~~~~~~~a~~~G~~v~ 252 (588)
...++|++|+++++.+ .|+||+|+|+|+.+++.++ .+ +||+ |++...|+... ....+..|++++
T Consensus 77 ~~~~l~~~la~~~~~~----~v~~t~ggt~A~~~al~~~-~~~~~~~Gd~~~~viv~~~~~~~~----~~~~~~~g~~~~ 147 (467)
T 1ax4_A 77 NYYDLKDKAKELFNYD----YIIPAHQGRGAENILFPVL-LKYKQKEGKAKNPVFISNFHFDTT----AAHVELNGCKAI 147 (467)
T ss_dssp HHHHHHHHHHHHHCCC----EEEEESSHHHHHHHHHHHH-HHHHHHTTCCSSCEEEESSCCHHH----HHHHHHTTCEEE
T ss_pred cHHHHHHHHHHHcCCC----cEEEcCCcHHHHHHHHHHH-HHhhccCCCccceEEEeccccchh----hHHHhccCCcee
Confidence 4568999999999972 4999999999999999988 67 8998 77665554322 233455788888
Q ss_pred EEeccC---------CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCC-CccCCHH---HH-HHHHHcCcEEEEe
Q 037063 253 SAEFAW---------PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVT-GARYSYM---WM-SVAAEKGWHVLLD 318 (588)
Q Consensus 253 ~v~~~~---------~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~t-G~~~pl~---~I-~~a~~~g~~vvvD 318 (588)
.++.+. .++.+|+++|+++|+.. ..+++++|++++++|++ |..+|.+ +| ++|+++|+++|+|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~----~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~D 223 (467)
T 1ax4_A 148 NIVTEKAFDSETYDDWKGDFDIKKLKENIAQH----GADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMD 223 (467)
T ss_dssp ECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHH----CGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred cccccccccccccCCcccccCHHHHHHHHHhc----CCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEE
Confidence 775431 13568999999999721 11368999999999999 8888765 56 8999999999999
Q ss_pred CCCcC-----------CCCCCCCCCCC------CCCcEEEeccCccCCCCCCceEEEEEe-C-cchhcccCCCC--CCCc
Q 037063 319 ATALG-----------SKDMDTLGLSL------FKPDFLICSFYKIFGENPSGFGCLFVK-K-SSASVLSGSTS--SVST 377 (588)
Q Consensus 319 aa~~~-----------~~d~~~l~l~~------~~~D~vv~S~~K~~G~~P~G~G~L~v~-~-~~~~~l~~~~~--g~~g 377 (588)
+++.. +. ...++.. ..+|++++|+||.+|. |.| |+++.+ + ++++.+..... + +
T Consensus 224 e~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~s~sK~~g~-~~G-g~~~~~d~~~l~~~~~~~~~~~~--~ 297 (467)
T 1ax4_A 224 SARFCENAYFIKARDPKY--KNATIKEVIFDMYKYADALTMSAKKDPLL-NIG-GLVAIRDNEEIFTLARQRCVPME--G 297 (467)
T ss_dssp CTTHHHHHHHHHHHCGGG--TTCCHHHHHHHHGGGCSEEEEETTSTTCC-SSC-EEEEESSCHHHHHHHHHHHHHHT--C
T ss_pred chhhhhcchhcccccccc--CCCchhhhhhhhccccceEEEeccccCCC-Ccc-eEEEeCCHHHHHHHHHhhccccc--c
Confidence 98654 21 1111100 1278999999999995 545 777777 5 66655432210 1 0
Q ss_pred eEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCC
Q 037063 378 IMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETG 457 (588)
Q Consensus 378 ~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g 457 (588)
. . +.|+.+...+ +++..+++...+ +...++...+++++.+.|.+.
T Consensus 298 ~--------------------~-~~~~~~~~~~---~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~-------- 342 (467)
T 1ax4_A 298 F--------------------V-TYGGLAGRDM---AAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLREA-------- 342 (467)
T ss_dssp S--------------------T-TTTTCCHHHH---HHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHT--------
T ss_pred c--------------------c-ccCCccchHH---HHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHhC--------
Confidence 0 0 1222222221 233334543211 122233345667788888762
Q ss_pred CCeEEEeCCCCCCCcccEEEEEeec----CCCCCcCHHHHHHHH-HhCCcEecc-ccccCcccccchHHHHHHHHhhhcC
Q 037063 458 IPLVRIYGPKVMFDRGPSLAFNVFD----WNGTRIDPALVQKLA-DRHNISLSC-GFLQNIFFSGEYEQERVRVLETRSG 531 (588)
Q Consensus 458 ~~~v~i~~p~~~~~rg~iv~f~~~~----~~g~~i~~~~v~~~l-~~~gI~v~~-G~~c~~~~~~~~~~~~~~~l~~~~~ 531 (588)
+++++.| .++..+.+.+.. ..+..++...+.+.| .++||.+++ |.++..... ..+
T Consensus 343 --~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~-----------~~g-- 403 (467)
T 1ax4_A 343 --GIPIQYP----TGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDP-----------ATG-- 403 (467)
T ss_dssp --TCCBCSS----CCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCT-----------TTC--
T ss_pred --CCCcccC----CCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCcccccccc-----------ccc--
Confidence 2333333 245555555210 000113345566666 889999987 643210000 000
Q ss_pred CCCCcCCccEEEEecCCC-CCHHHHHHHHHHHHHhhhh
Q 037063 532 TNETRSGVSVVTAALGCL-TNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 532 ~~~~~~g~~~vRvSlg~~-~t~eDv~~li~~l~~~l~~ 568 (588)
.....+...||+|++.+ +|.+||+++++.|+++++.
T Consensus 404 -~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 440 (467)
T 1ax4_A 404 -EQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEK 440 (467)
T ss_dssp -SBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHH
T ss_pred -cccccccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 00001124999999944 8999999999999998865
No 170
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.86 E-value=1.9e-20 Score=202.28 Aligned_cols=335 Identities=12% Similarity=0.042 Sum_probs=210.0
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
.--+|+|+.+..+..+.+.+++.........++.. | .+. .| ..++|+.++
T Consensus 55 ~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~-----------------Y----~~~---~G------~~~lr~~ia 104 (448)
T 3meb_A 55 GVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKE-----------------Y----PPV---AG------FPLFLEAAQ 104 (448)
T ss_dssp SSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCS-----------------C----CCT---TC------CHHHHHHHH
T ss_pred ecccccCCCCCEechHHHHHHHHHHhhcccCCCCC-----------------C----CCC---cc------hHHHHHHHH
Confidence 55689999999999988888853322001111110 0 000 01 247889999
Q ss_pred HHh-CCC-----CCCceEEE--ecCHHHHHHHHH--HhCCCCCCCeEEEcCCCchhHHHHHHHHHH----hcCCEEEEEe
Q 037063 190 DFM-NIS-----EDDYTLVF--TANQSSAFKLLA--ESYPFYSNPRLLTVYDHENEAAALMIESSK----KRGARVSSAE 255 (588)
Q Consensus 190 ~~l-ga~-----~~e~~vvf--t~g~T~al~lv~--~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~----~~G~~v~~v~ 255 (588)
+++ |.+ +++ |++ |+|+|+|+++++ .++ +.+||+|++....+.+.. ..++ ..|++++.++
T Consensus 105 ~~l~g~~~~~~~~~~--i~~~~t~ggt~al~l~~~~~~~-~~~gd~Vlv~~p~~~~~~----~~~~~~~~~~G~~v~~~~ 177 (448)
T 3meb_A 105 FLMFGKDSKAAQEGR--IASCQSLSGTGSLHIGFEFLHL-WMPKAEFYMPSTTWPNHY----GIYDKVFNKLKVPYKEYT 177 (448)
T ss_dssp HHHHCTTCHHHHTTC--EEEEEESHHHHHHHHHHHHHHH-HCTTCCEEEESSCCTHHH----HHHHHHHCTTTSCCEEEC
T ss_pred HHhcCCCccccCcCc--EEEEECCcHHHHHHHHHHHHHH-hCCCCEEEECCCCCHhHH----HHHHhhHHhCCCeEEEEe
Confidence 887 876 444 999 999999998843 444 678999765544433232 3344 7899999999
Q ss_pred c-cCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCc-CCCCC-
Q 037063 256 F-AWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATAL-GSKDM- 327 (588)
Q Consensus 256 ~-~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~-~~~d~- 327 (588)
. +.. ++.+|+++|++.++. ..++++++++++++|+||..+|.++ | ++|+++|+++++|.+.. +...-
T Consensus 178 ~~~~~~~~~~d~e~l~~~l~~-----~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~ 252 (448)
T 3meb_A 178 YLRKDGELEIDFSNTKKDIQS-----APEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSF 252 (448)
T ss_dssp CBCTTSCSSBCHHHHHHHHHH-----SCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCH
T ss_pred ccccccCCCcCHHHHHHHHHh-----CCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCc
Confidence 8 533 478999999999972 1135889999999999999999776 6 88999999999999843 22110
Q ss_pred --CCCCC----CCCCCcEEEeccCccCCCCCCceEEE--EE--------eC-----cchhcccCCCCCCCceEeeecCCC
Q 037063 328 --DTLGL----SLFKPDFLICSFYKIFGENPSGFGCL--FV--------KK-----SSASVLSGSTSSVSTIMGIEPSFS 386 (588)
Q Consensus 328 --~~l~l----~~~~~D~vv~S~~K~~G~~P~G~G~L--~v--------~~-----~~~~~l~~~~~g~~g~v~~~~~~~ 386 (588)
+...+ ......+++.|++|.||.+..++|++ ++ .+ ++++.+....
T Consensus 253 ~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~-------------- 318 (448)
T 3meb_A 253 EADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQI-------------- 318 (448)
T ss_dssp HHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHH--------------
T ss_pred ccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHH--------------
Confidence 00000 11123477889999999322338888 55 32 2322222110
Q ss_pred cccccccccccccccCCCCCccchhhHHHHHHHHHHHH---H--hCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCe-
Q 037063 387 EIIELETLDESSQSKFPESSISGVSSKLVECKGLDHAD---A--LGLILISNRARYLINWLANALMNLHHPHSETGIPL- 460 (588)
Q Consensus 387 ~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~---~--~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~- 460 (588)
..++.+...+. ..++..+|+... + ..++.+.++++.+++++++.|.++ |.++
T Consensus 319 --------------~~~~~~~~~~~-~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-------~~~~~ 376 (448)
T 3meb_A 319 --------------RKTWSMSAIHG-AYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKR-------KTPGP 376 (448)
T ss_dssp --------------HTTTSSCCHHH-HHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TCCCS
T ss_pred --------------hcccCCccHHH-HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCCCc
Confidence 01111111110 122223332110 0 125778888999999999999885 2233
Q ss_pred -----EEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCC
Q 037063 461 -----VRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNET 535 (588)
Q Consensus 461 -----v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~ 535 (588)
+.+..| .++++.| .+ ++.+.+.++++++||.+.+|
T Consensus 377 ~~~~~~~~~~~-----~~g~~~~--~~-----~~~~~~~~ll~~~gV~v~~G---------------------------- 416 (448)
T 3meb_A 377 GSKGTWDHILT-----AIGMFTF--TG-----LTPEHVDYLKEKWSIYLVKA---------------------------- 416 (448)
T ss_dssp TTTCCCTHHHH-----CCSSEEE--CC-----CCHHHHHHHHHHHCEEECSG----------------------------
T ss_pred CcccccceeCC-----CceEEEe--cC-----CCHHHHHHHHHhCCEEEeCC----------------------------
Confidence 222222 2344333 23 44677788889999998766
Q ss_pred cCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 536 RSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 536 ~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
. .|+|++..++ ++|+++++.|+++++.
T Consensus 417 -~----gRis~a~~~~-~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 417 -G----GRMSMCGLTE-SNCDYVAEAIHDAVTK 443 (448)
T ss_dssp -G----GEEEGGGCCT-TTHHHHHHHHHHHHHH
T ss_pred -C----cEEEEecCCH-HHHHHHHHHHHHHHHh
Confidence 1 3899875544 6699999999998863
No 171
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.85 E-value=4.9e-20 Score=198.97 Aligned_cols=349 Identities=11% Similarity=0.034 Sum_probs=218.5
Q ss_pred CCCCCCCHHHHHHhhhhccc-CcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH-HHHHHHHHhCCC
Q 037063 118 IGHGLFSYSQMHSCSSNVHS-SAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK-IRKRIMDFMNIS 195 (588)
Q Consensus 118 a~~gl~~~~~~~~~~~~~~~-~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~-~r~~ia~~lga~ 195 (588)
++..++++.+++++.+.+.. ...++| .+....|....+..++ +|+++++++|++
T Consensus 52 ~~~~~~~~~v~~a~~~~~~~~~~~g~~------------------------~~~~~~g~~~~~~~e~~a~~~la~~~g~~ 107 (447)
T 3h7f_A 52 ASENFVPRAVLQAQGSVLTNKYAEGLP------------------------GRRYYGGCEHVDVVENLARDRAKALFGAE 107 (447)
T ss_dssp TTCCCCCHHHHHHHTSGGGGCCCCEET------------------------TEESSSCCHHHHHHHHHHHHHHHHHHTCS
T ss_pred cCCCCCCHHHHHHHHHHhcCCccccCC------------------------cccccCccHHHHHHHHHHHHHHHHHcCCC
Confidence 45567799999998665531 112222 1111112222223344 449999999996
Q ss_pred CCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHH-HHHHHhcCCEEEEEeccCCCCccCHHHHHHHHh
Q 037063 196 EDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALM-IESSKKRGARVSSAEFAWPNLRIHSGKLMKKIV 273 (588)
Q Consensus 196 ~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~-~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~ 273 (588)
. ..+++.|+|+|+..++.++ +++||+|++ ...|++....+. ... ...+..+..++++.+++.+|.++|++++.
T Consensus 108 ~---~~v~~~sGs~a~~~a~~~~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~d~~~l~~~i~ 182 (447)
T 3h7f_A 108 F---ANVQPHSGAQANAAVLHAL-MSPGERLLGLDLANGGHLTHGMRLNF-SGKLYENGFYGVDPATHLIDMDAVRATAL 182 (447)
T ss_dssp E---EECCCSSHHHHHHHHHHHH-CCTTCEEEEECGGGTCCGGGTCTTSH-HHHSSEEEEECCCTTTCSCCHHHHHHHHH
T ss_pred c---eEEEeCCHHHHHHHHHHHh-cCCCCEEEecCcccccccchhhhhhh-cCCeeEEEEcCcCcccCCcCHHHHHHHHH
Confidence 3 3554788899999999998 899999764 344432111110 011 12356677777765567899999999996
Q ss_pred hhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC-----CCCCCCCCCCCCCcEEEeccCcc
Q 037063 274 GKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS-----KDMDTLGLSLFKPDFLICSFYKI 347 (588)
Q Consensus 274 ~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~-----~d~~~l~l~~~~~D~vv~S~~K~ 347 (588)
. .++++|++...+|+++. ++++| ++|+++|+++|+|+++..+ .....+ ..+|+++.|+||.
T Consensus 183 ~-------~~~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~----~~~di~~~s~sK~ 249 (447)
T 3h7f_A 183 E-------FRPKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV----PHADVVSTTVHKT 249 (447)
T ss_dssp H-------HCCSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST----TTCSEEEEESSGG
T ss_pred h-------cCCeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC----CCCcEEEecCCcC
Confidence 2 35789999888887776 99999 9999999999999997553 111112 1379999999997
Q ss_pred CCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhC
Q 037063 348 FGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALG 427 (588)
Q Consensus 348 ~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G 427 (588)
+|. |.| |+++.++++++.+......+ ..|+++...+ +++..++..+...+
T Consensus 250 l~G-~~g-G~i~~~~~~~~~l~~~~~~~-------------------------~~~~~~~~~~---~a~~~a~~~~~~~~ 299 (447)
T 3h7f_A 250 LGG-GRS-GLIVGKQQYAKAINSAVFPG-------------------------QQGGPLMHVI---AGKAVALKIAATPE 299 (447)
T ss_dssp GCC-CSC-EEEEECGGGHHHHHHHHTTT-------------------------TCSSCCHHHH---HHHHHHHHHTTSHH
T ss_pred CCC-CCe-EEEEECHHHHHHHhhhcCCc-------------------------ccCCccHHHH---HHHHHHHHHhhCHH
Confidence 763 776 99999988776554322110 1223333222 45556665543324
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccc
Q 037063 428 LILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCG 507 (588)
Q Consensus 428 ~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G 507 (588)
++.+.+++..+++++.+.|.++.. ..++++++.+. ..+.++.+.+... .++...+.++|++.||.++..
T Consensus 300 ~~~~~~~~~~~~~~l~~~L~~~~~-----~~~g~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~l~~~GI~v~~~ 368 (447)
T 3h7f_A 300 FADRQRRTLSGARIIADRLMAPDV-----AKAGVSVVSGG---TDVHLVLVDLRDS---PLDGQAAEDLLHEVGITVNRN 368 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSHHH-----HHTTCEEGGGS---CSSSEEEEECTTS---SCCHHHHHHHHHHTTEECBC-
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc-----cCCCeEEecCC---CCCCEEEEEcCCC---CCCHHHHHHHHHHCCeEEecc
Confidence 577888888888999888876200 00245555421 2345555555431 256778889999999998732
Q ss_pred cccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC----CCHHHHHHHHHHHHHhhhhh
Q 037063 508 FLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL----TNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 508 ~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~----~t~eDv~~li~~l~~~l~~~ 569 (588)
... +.. ... .....+|+++... .+++|++++++.|.+.|+..
T Consensus 369 ~i~--~~~-------~~p-----------~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 369 AVP--NDP-------RPP-----------MVTSGLRIGTPALATRGFGDTEFTEVADIIATALATG 414 (447)
T ss_dssp --------------------------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHSG
T ss_pred cCC--CCC-------CCC-----------CCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 100 000 000 1112799998655 46899999999999987653
No 172
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.85 E-value=2.1e-20 Score=200.44 Aligned_cols=332 Identities=12% Similarity=0.079 Sum_probs=205.7
Q ss_pred CCeeeecCCCCC-CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHG-LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRI 188 (588)
Q Consensus 110 ~~~vyLD~a~~g-l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~i 188 (588)
++.++|+.+-.. +.|+.+++++.+.+.. .++.+.. ..|+. ..-..++|+.|
T Consensus 56 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~~~~~------------------------~~y~~--~~g~~~l~~~i 107 (432)
T 3ei9_A 56 AQVISLGIGDTTEPIPEVITSAMAKKAHE--LSTIEGY------------------------SGYGA--EQGAKPLRAAI 107 (432)
T ss_dssp CCCEECSSCCCCSCCCHHHHHHHHHHHHH--TTSTTTC------------------------CCCCC--TTCCHHHHHHH
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhc--ccccCCc------------------------cCCCC--CCCCHHHHHHH
Confidence 467888877555 4677888887665532 1221100 00111 11124677888
Q ss_pred HHHh----CCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcC---------CEEEEE
Q 037063 189 MDFM----NISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRG---------ARVSSA 254 (588)
Q Consensus 189 a~~l----ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G---------~~v~~v 254 (588)
++++ ++++++ |+||+|+++++.++ ..+ +++||+|++ ...|++ .... ...+...| .+++.+
T Consensus 108 a~~~~~~~~~~~~~--i~~t~G~~~al~~l-~~l-~~~gd~Vl~~~p~y~~-~~~~-~~~~g~~~~~~~~~~~~~~~~~~ 181 (432)
T 3ei9_A 108 AKTFYGGLGIGDDD--VFVSDGAKCDISRL-QVM-FGSNVTIAVQDPSYPA-YVDS-SVIMGQTGQFNTDVQKYGNIEYM 181 (432)
T ss_dssp HHHHHTTTTCCGGG--EEEESCHHHHHHHH-HHH-HCTTCCEEEEESCCTH-HHHH-HHHHTCSCCEETTTTEETTCEEE
T ss_pred HHHHHccCCCCcce--EEECCChHHHHHHH-HHH-cCCCCEEEEeCCCCHH-HHHH-HHHcCCcccccccccccCceEEe
Confidence 8876 776654 99999999999986 556 689999765 445553 3332 23333333 367888
Q ss_pred eccCCC-CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH----HHHHHcCcEEEEeCCCcCC-----
Q 037063 255 EFAWPN-LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM----SVAAEKGWHVLLDATALGS----- 324 (588)
Q Consensus 255 ~~~~~~-~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I----~~a~~~g~~vvvDaa~~~~----- 324 (588)
+++..+ ...+ +++ .+++++|++++++|+||..+|.+++ ++|+++|+++|+|+++...
T Consensus 182 ~~~~~~~~~~~---l~~----------~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~ 248 (432)
T 3ei9_A 182 RCTPENGFFPD---LST----------VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN 248 (432)
T ss_dssp ECCGGGTTSCC---GGG----------CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC
T ss_pred ccCcccCCcCC---hhh----------CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCC
Confidence 876221 1222 211 1578999999999999999997765 5699999999999997632
Q ss_pred -CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcch--------hcccCCCCCCCceEeeecCCCccccccccc
Q 037063 325 -KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSA--------SVLSGSTSSVSTIMGIEPSFSEIIELETLD 395 (588)
Q Consensus 325 -~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~--------~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~ 395 (588)
..+..+. .....++++.|++|.||.++.++|+++++++.+ +.+....
T Consensus 249 ~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 304 (432)
T 3ei9_A 249 PRSIFEIP-GAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRII----------------------- 304 (432)
T ss_dssp CSSGGGST-TGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHH-----------------------
T ss_pred CCChhhcC-CCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHh-----------------------
Confidence 1111111 112357999999999984345589999988772 2221110
Q ss_pred ccccccCCCCCccchhhHHHHHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 396 ESSQSKFPESSISGVSSKLVECKGLDH-ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 396 ~~~f~e~GT~~~~~~~~~~al~~aL~~-l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
.+ ..++.+..+. .+..+++.. ... .++.+.++++.+++++.+.|.++ +++++.+ ..+.
T Consensus 305 --~~-~~~~~~~~~~---~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~----------g~~~~~~----~~~~ 363 (432)
T 3ei9_A 305 --CT-CFNGASNISQ---AGALACLTPEGLE-AMHKVIGFYKENTNIIIDTFTSL----------GYDVYGG----KNAP 363 (432)
T ss_dssp --HH-SCCCSCHHHH---HHHHHHSSHHHHH-HHHHHHHHHHHHHHHHHHHHHHT----------TCCEEEC----SSSS
T ss_pred --cc-ccCCCCHHHH---HHHHHHHhcccHH-HHHHHHHHHHHHHHHHHHHHHHC----------CceecCC----Ccce
Confidence 00 1112222221 222334321 111 25778888899999999999885 2445543 2356
Q ss_pred EEEEEeecCCCCCcCHHH-HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHH
Q 037063 475 SLAFNVFDWNGTRIDPAL-VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFE 553 (588)
Q Consensus 475 iv~f~~~~~~g~~i~~~~-v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~e 553 (588)
++.+.+.+ .+... +.+++++.||.+++|..|.+ .|.+.||+|+ .++.|
T Consensus 364 ~~~~~~~~-----~~~~~~~~~ll~~~gv~v~~g~~f~~------------------------~~~~~iRis~--~~~~e 412 (432)
T 3ei9_A 364 YVWVHFPN-----QSSWDVFAEILEKTHVVTTPGSGFGP------------------------GGEGFVRVSA--FGHRE 412 (432)
T ss_dssp EEEEECTT-----SCHHHHHHHHHHHHCEECEEGGGGCG------------------------GGTTEEEEEC--CSCHH
T ss_pred EEEEECCC-----CCHHHHHHHHHHHCCEEEeCchHhCC------------------------CCCCEEEEEe--cCCHH
Confidence 66666653 34544 45667778999999866531 1223999996 56999
Q ss_pred HHHHHHHHHHH
Q 037063 554 DTYRLWAFVSR 564 (588)
Q Consensus 554 Dv~~li~~l~~ 564 (588)
+|+++++.|++
T Consensus 413 ~l~~~l~rl~~ 423 (432)
T 3ei9_A 413 NILEACRRFKQ 423 (432)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999876
No 173
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.85 E-value=1e-19 Score=195.34 Aligned_cols=160 Identities=11% Similarity=0.066 Sum_probs=126.4
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....++++++|++++|.+ . .++++|+++|+.+++.++ +++||+|++ ...|++ ....+...++..|++++.++.
T Consensus 81 ~p~~~~le~~lA~l~g~~---~-~v~~~sG~~Ai~~al~al-~~~Gd~Vi~~~~~y~~-~~~~~~~~~~~~G~~~~~v~~ 154 (430)
T 3ri6_A 81 NPTVEDLEQRLKNLTGAL---G-VLALGSGMAAISTAILTL-ARAGDSVVTTDRLFGH-TLSLFQKTLPSFGIEVRFVDV 154 (430)
T ss_dssp CHHHHHHHHHHHHHHTCS---E-EEEESCHHHHHHHHHHHH-CCTTCEEEEETTCCHH-HHHHHHTHHHHTTCEEEEECT
T ss_pred CHHHHHHHHHHHHHHCCC---c-EEEECCHHHHHHHHHHHH-hCCCCEEEEcCCCchh-HHHHHHHHHHHcCCEEEEeCC
Confidence 456789999999999984 2 566667789999999998 899999765 455554 443334466788999999987
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCCCC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLSLF 335 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~~~ 335 (588)
+ |+++|+++|+ +++++|++++++|++|.+.|+++| ++|+++|+++|+|+++..+....++ ..
T Consensus 155 ~------d~~~l~~ai~--------~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~~~~---~~ 217 (430)
T 3ri6_A 155 M------DSLAVEHACD--------ETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLLEAK---RL 217 (430)
T ss_dssp T------CHHHHHHHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTCCGG---GG
T ss_pred C------CHHHHHHhhC--------CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCChH---Hc
Confidence 4 7899999997 789999999999999999999999 9999999999999998877322222 23
Q ss_pred CCcEEEeccCccCCCCCCceEEEEE
Q 037063 336 KPDFLICSFYKIFGENPSGFGCLFV 360 (588)
Q Consensus 336 ~~D~vv~S~~K~~G~~P~G~G~L~v 360 (588)
++|+++.|++|++|.+..++|.+++
T Consensus 218 g~div~~S~sK~l~g~g~~~gG~vv 242 (430)
T 3ri6_A 218 GVDIEVLSSTKFISGGGTSVGGVLI 242 (430)
T ss_dssp TCSEEEEECCCEEETTEEECCEEEE
T ss_pred CCEEEEECCcccccCCCCceEEEEE
Confidence 4899999999988721123555555
No 174
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.85 E-value=9.2e-21 Score=199.90 Aligned_cols=295 Identities=14% Similarity=0.040 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEeccCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEFAWP 259 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~ 259 (588)
.+++++.+++++|+++. ..+++|+|+|+|+.+++.++ +||+|++ ...|++ .... ...++..|++++.+ .
T Consensus 60 ~~~~~~~~a~~~g~~~~-~~~~~~~ggt~a~~~~~~~~---~gd~Vl~~~~~y~~-~~~~-~~~~~~~g~~~~~v-~--- 129 (374)
T 2aeu_A 60 AEKVNEYGLKHLGGDEN-DKCVGFNRTSSAILATILAL---KPKKVIHYLPELPG-HPSI-ERSCKIVNAKYFES-D--- 129 (374)
T ss_dssp HHHHHHHHHHHHTCCTT-EEEEEESSHHHHHHHHHHHH---CCSEEEEECSSSSC-CTHH-HHHHHHTTCEEEEE-S---
T ss_pred HHHHHHHHHHHhCCCCc-ceEEEEcChHHHHHHHHHhC---CCCEEEEecCCCCc-cHHH-HHHHHHcCcEEEEe-C---
Confidence 45777788899998521 34999999999999999986 8999664 444443 2222 22556789999887 2
Q ss_pred CCccCHHHHHHHHhhhccccCCCcceE-EEEeCCCCCCC-ccCCHHHH-HHHHHcCcEEEEeCCCcCCC---CCC--CCC
Q 037063 260 NLRIHSGKLMKKIVGKRKKKKKKKRGL-FVFPLQSKVTG-ARYSYMWM-SVAAEKGWHVLLDATALGSK---DMD--TLG 331 (588)
Q Consensus 260 ~~~i~~e~l~~~i~~~~~~~~~~~t~L-v~~~~~sn~tG-~~~pl~~I-~~a~~~g~~vvvDaa~~~~~---d~~--~l~ 331 (588)
|+++|+++ + +++++ |++++++|+|| ...++++| ++|+++|+++|+|+++.... ... .++
T Consensus 130 ----d~~~l~~~-~--------~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~ 196 (374)
T 2aeu_A 130 ----KVGEILNK-I--------DKDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALK 196 (374)
T ss_dssp ----CHHHHHTT-C--------CTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHH
T ss_pred ----CHHHHHhc-C--------CCccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccc
Confidence 66777766 4 67999 99999999999 88899999 99999999999999865431 001 111
Q ss_pred CCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchh
Q 037063 332 LSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVS 411 (588)
Q Consensus 332 l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~ 411 (588)
+.+|+++.|+||+++ +.++|++++++++++.+...... + .++++...
T Consensus 197 ---~~~di~~~S~sK~l~--g~~~G~~~~~~~~~~~l~~~~~~------------------------~--~~~~~~~~-- 243 (374)
T 2aeu_A 197 ---LGADLVVTSTDKLME--GPRGGLLAGKKELVDKIYIEGTK------------------------F--GLEAQPPL-- 243 (374)
T ss_dssp ---HTCSEEEEETTSSSS--SCSCEEEEEEHHHHHHHHHHHHT------------------------T--TCBCCHHH--
T ss_pred ---cCCcEEEecCccccc--CcceEEEEECHHHHHHHHHhhcc------------------------c--cCCCCHHH--
Confidence 238999999999876 33889999999887766432210 0 11122211
Q ss_pred hHHHHHHHHHHHHHhCHHHHHHHHHHH----HHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCC
Q 037063 412 SKLVECKGLDHADALGLILISNRARYL----INWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTR 487 (588)
Q Consensus 412 ~~~al~~aL~~l~~~G~~~i~~r~~~L----~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~ 487 (588)
.+++..+|+.+...-++.+.++.+.+ .+.+.+.|..+. ..+++.+..+ ..+.++.+ ..... .
T Consensus 244 -~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~------~~~g~~~~~~----~~g~~~~~-~~~~~--~ 309 (374)
T 2aeu_A 244 -LAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAID------DNINIVYERT----PTGFVIKR-VYKDD--T 309 (374)
T ss_dssp -HHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTC------TTEEEEEEEC----SSEEEEEE-EESSH--H
T ss_pred -HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh------hccCcceeeC----CceEEEEe-ecccc--c
Confidence 13444555543110123333444444 455555555420 0034554322 12333222 11100 0
Q ss_pred cC----HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCC-CCCHHHHHHHHHHH
Q 037063 488 ID----PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGC-LTNFEDTYRLWAFV 562 (588)
Q Consensus 488 i~----~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~-~~t~eDv~~li~~l 562 (588)
.+ .+.+.+++.++||.+++|.... .+..++|++++. ..+.++++++.++|
T Consensus 310 ~~~~~~~~~~~~ll~~~gV~v~~g~~~~-------------------------~~~~~lRi~~~~~~~~~~~l~~l~~~l 364 (374)
T 2aeu_A 310 INIKKLIEIGFNLLKNYGIITITVAGMP-------------------------GASKSLRIDLTSRDAERIDDNYIIKAI 364 (374)
T ss_dssp HHHHHHHHHHHHHHHHHCEECSTTSSSC-------------------------SSCCSEEEETTSGGGGGSCHHHHHHHH
T ss_pred ccccchHHHHHHHHHhCCEEEecCCCCC-------------------------CCCCeEEEEcCCchHHHHHHHHHHHHH
Confidence 00 0133467778899998763210 112289999874 22334599999999
Q ss_pred HHhhhhhh
Q 037063 563 SRFLDADF 570 (588)
Q Consensus 563 ~~~l~~~~ 570 (588)
++.+++.+
T Consensus 365 ~~~l~~~~ 372 (374)
T 2aeu_A 365 VESIKMAF 372 (374)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99887654
No 175
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.85 E-value=3.5e-20 Score=196.57 Aligned_cols=331 Identities=12% Similarity=0.015 Sum_probs=208.1
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
.--+|+|+.+..+..+.+.+++.+.... .+++. | .+. .| ..++|+.++
T Consensus 34 ~~g~~~d~~~~~~~~~~v~~a~~~~~~~--~~~~~-----------------Y----~~~---~g------~~~lr~~ia 81 (401)
T 7aat_A 34 GVGAYRDDNGKPYVLNCVRKAEAMIAAK--KMDKE-----------------Y----LPI---AG------LADFTRASA 81 (401)
T ss_dssp CCCSCCCTTSCCCCCHHHHHHHHHHHHT--TCCCC-----------------C----CCT---TC------CHHHHHHHH
T ss_pred eeeeEECCCCCEechHHHHHHHHHhccc--ccccC-----------------C----CCC---CC------CHHHHHHHH
Confidence 5668999999988888888876544321 11210 0 000 01 247888888
Q ss_pred HHhCCC------CCCceEEE--ecCHHHHHHHHHHhCC--CCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccC-
Q 037063 190 DFMNIS------EDDYTLVF--TANQSSAFKLLAESYP--FYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAW- 258 (588)
Q Consensus 190 ~~lga~------~~e~~vvf--t~g~T~al~lv~~s~~--~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~- 258 (588)
++++.. +++ |++ |+|+|+|+++++.++. .++||+|++....+... ...++..|++++.++++.
T Consensus 82 ~~~~~~~~~~~~~~~--i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~ 155 (401)
T 7aat_A 82 ELALGENSEAFKSGR--YVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNH----TPIFRDAGLQLQAYRYYDP 155 (401)
T ss_dssp HHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTH----HHHHHHTTCEEEEEECEET
T ss_pred HHhcCCCccccccCc--eEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhH----HHHHHHcCCeeEeeeeecc
Confidence 887643 554 877 9999999998877652 37899976544433322 334567899999999852
Q ss_pred CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC-CCCCC-----
Q 037063 259 PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG-SKDMD----- 328 (588)
Q Consensus 259 ~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~-~~d~~----- 328 (588)
.++.+|.+++++.+. + ..+++++|++++++||||..++.++ | ++|+++|+++++|.+... ..+-.
T Consensus 156 ~~~~~d~~~l~~~l~----~-~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~ 230 (401)
T 7aat_A 156 KTCSLDFTGAMEDIS----K-IPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAW 230 (401)
T ss_dssp TTTEECHHHHHHHHT----T-SCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTH
T ss_pred ccCccCHHHHHHHHH----h-CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHH
Confidence 367899999988886 2 2367899999999999999998655 5 789999999999998432 21100
Q ss_pred CCC--CCCCCCcEEEeccCccCCCCCCceEEEEEeC---cch----hcccCCCCCCCceEeeecCCCccccccccccccc
Q 037063 329 TLG--LSLFKPDFLICSFYKIFGENPSGFGCLFVKK---SSA----SVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQ 399 (588)
Q Consensus 329 ~l~--l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~---~~~----~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f 399 (588)
.+. .......+++.|++|.||.+..++|++++.. +.. ..+.....
T Consensus 231 ~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~-------------------------- 284 (401)
T 7aat_A 231 ALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIR-------------------------- 284 (401)
T ss_dssp HHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHH--------------------------
T ss_pred HHHHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHH--------------------------
Confidence 000 0122356889999999993222389999732 211 11111100
Q ss_pred ccCCCCCccchhhHHHHHHHHHH--H----HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcc
Q 037063 400 SKFPESSISGVSSKLVECKGLDH--A----DALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRG 473 (588)
Q Consensus 400 ~e~GT~~~~~~~~~~al~~aL~~--l----~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg 473 (588)
.++.+..... ..++..++.. + .+ .++++.++.+.+++++.+.|.++..+ +.++++.| .+
T Consensus 285 --~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~~~~~------~~~~~~~~-----~~ 349 (401)
T 7aat_A 285 --PMYSNPPMNG-ARIASLILNTPELRKEWLV-EVKGMADRIISMRTQLVSNLKKEGSS------HNWQHITD-----QI 349 (401)
T ss_dssp --HHHSSCCHHH-HHHHHHHHHCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCC------SCCHHHHH-----CC
T ss_pred --hccCCCChHH-HHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCC------CCCceecC-----Cc
Confidence 0011111110 0111122211 0 11 15677888889999999999885110 12333322 34
Q ss_pred cEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHH
Q 037063 474 PSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFE 553 (588)
Q Consensus 474 ~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~e 553 (588)
+++.| .+ ++.+.+.++++++||.+.. .+|+|++..++.
T Consensus 350 ~~~~~--~~-----~~~~~~~~ll~~~gi~v~~----------------------------------~~Ris~~~~~~~- 387 (401)
T 7aat_A 350 GMFCF--TG-----LKPEQVERLTKEFSIYMTK----------------------------------DGRISVAGVASS- 387 (401)
T ss_dssp SSEEE--CC-----CCHHHHHHHHHHHCEECCT----------------------------------TCEEEGGGCCTT-
T ss_pred ceEEe--cC-----CCHHHHHHHHHhCCEeccC----------------------------------CCeEEeccCChh-
Confidence 44444 23 4577788888999998742 379999877665
Q ss_pred HHHHHHHHHHHhh
Q 037063 554 DTYRLWAFVSRFL 566 (588)
Q Consensus 554 Dv~~li~~l~~~l 566 (588)
||+++++.|++.+
T Consensus 388 ~i~~~~~~l~~~~ 400 (401)
T 7aat_A 388 NVGYLAHAIHQVT 400 (401)
T ss_dssp THHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHh
Confidence 4999999998865
No 176
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.85 E-value=5.8e-20 Score=195.72 Aligned_cols=335 Identities=13% Similarity=0.020 Sum_probs=205.1
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
..-.|+|+.+....++.+.+++.+.......+ |+. ..-..++|+.++
T Consensus 43 ~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-------------------------------Y~~--~~g~~~lr~~la 89 (413)
T 3t18_A 43 ALGTLLDDKGKIIALPSVYDRLDEMDRSHIAS-------------------------------YAP--IEGEKDYRKIVI 89 (413)
T ss_dssp CSCCCBCTTSCBCCCHHHHHHHHHSCHHHHHS-------------------------------CCC--TTCCHHHHHHHH
T ss_pred cccCccCCCCCcCChHHHHHHHHhcCcccccC-------------------------------cCC--CCCCHHHHHHHH
Confidence 45568888888888888888764322100000 000 000135666666
Q ss_pred HHh-CCC-CC-CceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHH
Q 037063 190 DFM-NIS-ED-DYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSG 266 (588)
Q Consensus 190 ~~l-ga~-~~-e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e 266 (588)
+++ +.. ++ ...|++|+|+++|+.+++.++ +++||+|++....+... ...++..|++++.+++..+++.+|++
T Consensus 90 ~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~~-~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~d~~ 164 (413)
T 3t18_A 90 DTLFGPYKPEGYISAIATPGGTGAIRSAIFSY-LDEGDPLICHDYYWAPY----RKICEEFGRNFKTFEFFTDDFAFNID 164 (413)
T ss_dssp HHHHGGGCCSSEEEEEEESHHHHHHHHHHHHH-CCSSCEEEEESSCCTHH----HHHHHHHTCEEEEECCBCTTSSBCHH
T ss_pred HHHhcccCccccCcEEEcCccHHHHHHHHHHh-cCCCCEEEECCCCcccH----HHHHHHhCCeEEEeeccCCCCCcCHH
Confidence 654 221 22 236999999999999999999 89999977655444322 23456679999999985455689999
Q ss_pred HHHHHHhhhccccCCCcce-EEEEeCC-CCCCCccCCHHHH-HH---HH------HcCcEEEEeCCCcC-CCC---CCCC
Q 037063 267 KLMKKIVGKRKKKKKKKRG-LFVFPLQ-SKVTGARYSYMWM-SV---AA------EKGWHVLLDATALG-SKD---MDTL 330 (588)
Q Consensus 267 ~l~~~i~~~~~~~~~~~t~-Lv~~~~~-sn~tG~~~pl~~I-~~---a~------~~g~~vvvDaa~~~-~~d---~~~l 330 (588)
+|+++++. ...++++ +++++++ +|+||..+|.+++ ++ |+ ++|++||+|.+... ..+ ...+
T Consensus 165 ~l~~~l~~----~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~ 240 (413)
T 3t18_A 165 VYKEAIDE----GIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKF 240 (413)
T ss_dssp HHHHHHHH----HHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGG
T ss_pred HHHHHHHH----HhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHH
Confidence 99999972 0001466 8888888 9999999999887 54 44 89999999998422 110 1111
Q ss_pred -C-CCCCCCc---EEEeccCccCCCCCCceEEEEE---eCcchhcccCCCCCCCceEeeecCCCcccccccccccccccC
Q 037063 331 -G-LSLFKPD---FLICSFYKIFGENPSGFGCLFV---KKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKF 402 (588)
Q Consensus 331 -~-l~~~~~D---~vv~S~~K~~G~~P~G~G~L~v---~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~ 402 (588)
. ......| +++.|++|.||.+..++|++++ ++++++.+....... . . . ..
T Consensus 241 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~-~-------------~-------~-~~ 298 (413)
T 3t18_A 241 FEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHS-A-------------R-------C-NW 298 (413)
T ss_dssp GGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHH-H-------------H-------H-HT
T ss_pred HHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHh-h-------------h-------c-cc
Confidence 0 0111234 6778999999842334899998 777776654322100 0 0 0 00
Q ss_pred CCCCccchhhHHHHHHHHHHH-----HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE
Q 037063 403 PESSISGVSSKLVECKGLDHA-----DALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA 477 (588)
Q Consensus 403 GT~~~~~~~~~~al~~aL~~l-----~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~ 477 (588)
.+.+..+. .++..+++.. .+ .++.+.++.+...+++.+.|.++ +++++.| .++++.
T Consensus 299 ~~~~~~~~---~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~----------g~~~~~~-----~~~~~~ 359 (413)
T 3t18_A 299 SNGTHAAQ---NILIELERAENKKIYEQ-ELVDLRNMLKSRADVFVTAAKEN----------KLTMIPY-----FGGFFT 359 (413)
T ss_dssp SSCCHHHH---HHHHHTTSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT----------TCCCBCC-----CSSSCE
T ss_pred cCCChHHH---HHHHHHhcChHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHc----------CCCccCC-----CceEEE
Confidence 01121111 2333333221 11 14566777888888888888875 2334433 344433
Q ss_pred EEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHH
Q 037063 478 FNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYR 557 (588)
Q Consensus 478 f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~ 557 (588)
+. .. .+...+.+.|.++||.+++| .+ +||+|++..++.+.+++
T Consensus 360 ~~-~~-----~~~~~~~~~l~~~gv~v~~g-----------------------------~~--~iRis~~~~~~~~~l~~ 402 (413)
T 3t18_A 360 FI-PT-----DKAFDIVKDLEKENIFTIPS-----------------------------AK--GIRVAICGVGEEKIPKL 402 (413)
T ss_dssp EE-EC-----SCHHHHHHHHHHTTEECEEC-----------------------------SS--EEEECTTTSCGGGHHHH
T ss_pred Ee-CC-----CCHHHHHHHHHhCCEEEecC-----------------------------CC--ceEEEEeeCCHHHHHHH
Confidence 32 11 24677777888999999876 12 89999997666666555
Q ss_pred HHHHHHH
Q 037063 558 LWAFVSR 564 (588)
Q Consensus 558 li~~l~~ 564 (588)
+.+++++
T Consensus 403 l~~~l~~ 409 (413)
T 3t18_A 403 VQRLAFY 409 (413)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555554
No 177
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.85 E-value=3.1e-19 Score=188.97 Aligned_cols=331 Identities=11% Similarity=0.061 Sum_probs=214.3
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|||+.+. |..++.+++++.+.+....++. +. ...+..++
T Consensus 34 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-----------------------~~--------~~~~~~~~ 82 (395)
T 3nx3_A 34 KAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTS-----------------------NL--------YYNENIAA 82 (395)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCC-----------------------TT--------SBCHHHHH
T ss_pred CCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccccc-----------------------cc--------cCCHHHHH
Confidence 56789998765 3347888888866653211100 00 01466789
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-C-----CCCCeEE-EcCCCchhHHHHHH--------HHHHhcC
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-F-----YSNPRLL-TVYDHENEAAALMI--------ESSKKRG 248 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~-----~~gd~ll-~~~e~~s~~~~~~~--------~~a~~~G 248 (588)
++++++++++. + .|+||+|+|+|+.+++..+. . .++++|+ ....||......+. ......+
T Consensus 83 l~~~la~~~~~--~--~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 158 (395)
T 3nx3_A 83 AAKNLAKASAL--E--RVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLI 158 (395)
T ss_dssp HHHHHHHHHTC--S--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCC
T ss_pred HHHHHHHhcCC--C--eEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCC
Confidence 99999999983 3 49999999999999887651 1 3467755 55566643222110 0011223
Q ss_pred CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCc-
Q 037063 249 ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATAL- 322 (588)
Q Consensus 249 ~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~- 322 (588)
..+..++.+ |+++|+++++ +++++|++..++|++|.+.| +++| ++|+++|+++|+|+++.
T Consensus 159 ~~~~~~~~~------d~~~l~~~l~--------~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~ 224 (395)
T 3nx3_A 159 SGVKFAKYN------DISSVEKLVN--------EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCG 224 (395)
T ss_dssp SCEEEECTT------CHHHHHTTCC--------TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred CCcEEeCCC------CHHHHHHhcc--------CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccC
Confidence 456666543 6888988887 67899999999999999988 8999 99999999999999976
Q ss_pred CCCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcc-hhcccCCCCCCCceEeeecCCCccccccccccccc
Q 037063 323 GSKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSS-ASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQ 399 (588)
Q Consensus 323 ~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~-~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f 399 (588)
++.. ..........+|+++ +.|.+|. +.++|++++++++ ++.+.+...++ + |
T Consensus 225 ~g~~g~~~~~~~~~~~~d~~t--~sK~~~~-G~~~G~~~~~~~~~~~~~~~~~~~~--~--------------------~ 279 (395)
T 3nx3_A 225 MGRSGKFFAYEHAQILPDIMT--SAKALGC-GLSVGAFVINQKVASNSLEAGDHGS--T--------------------Y 279 (395)
T ss_dssp TTTTSSSSGGGGGTCCCSEEE--ECGGGTT-TSCCEEEEECHHHHHHHSCTTCCSS--C--------------------B
T ss_pred CCcCCcchhHHhcCCCCCEEE--ecccccC-CCceEEEEEchhhhhhhcCCcccCC--C--------------------C
Confidence 3211 011111122377765 5597774 5689999999988 77776543321 0 0
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEE
Q 037063 400 SKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFN 479 (588)
Q Consensus 400 ~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~ 479 (588)
+.+..+ .++..++|+.+.. +.+.++.+.+.+++++.|.++... .+.+.... ..+.++.+.
T Consensus 280 ----~~~~~~---~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~-----~~g~~~~~~ 339 (395)
T 3nx3_A 280 ----GGNPLV---CAGVNAVFEIFKE---EKILENVNKLTPYLEQSLDELINE-----FDFCKKRK-----GLGFMQGLS 339 (395)
T ss_dssp ----SCCHHH---HHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHH-----CTTEEEEE-----EETTEEEEE
T ss_pred ----CCCHHH---HHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEE-----eEEEEEEEE
Confidence 011111 1344466666543 345556666666666666543100 13333221 246788888
Q ss_pred eecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHH
Q 037063 480 VFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLW 559 (588)
Q Consensus 480 ~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li 559 (588)
+.+. .+...+.+.|.++||.++.+. ...||+++++..|.||+++++
T Consensus 340 ~~~~----~~~~~~~~~l~~~Gi~v~~~~------------------------------~~~iRi~~~~~~t~e~i~~~l 385 (395)
T 3nx3_A 340 LDKS----VKVAKVIQKCQENALLLISCG------------------------------ENDLRFLPPLILQKEHIDEMS 385 (395)
T ss_dssp ECTT----SCHHHHHHHHHHTTEECEEET------------------------------TTEEEECCCTTCCHHHHHHHH
T ss_pred eCCc----chHHHHHHHHHHCCCEEecCC------------------------------CCEEEEECCCCCCHHHHHHHH
Confidence 7652 246677777888999988651 128999999999999999999
Q ss_pred HHHHHhhhh
Q 037063 560 AFVSRFLDA 568 (588)
Q Consensus 560 ~~l~~~l~~ 568 (588)
+.|++++++
T Consensus 386 ~~l~~~l~~ 394 (395)
T 3nx3_A 386 EKLRKALKS 394 (395)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999998753
No 178
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.84 E-value=6.4e-21 Score=203.07 Aligned_cols=328 Identities=16% Similarity=0.171 Sum_probs=213.0
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhh-hcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSS-NVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRI 188 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~-~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~i 188 (588)
..-.|||+.+..+.++.+.+++.+ .+.. +..+ .|+. ..-..++|+.|
T Consensus 35 ~~g~~~d~~~~~~~~~~v~~a~~~~~~~~---~~~~---------------------------~y~~--~~g~~~lr~~i 82 (412)
T 1yaa_A 35 GIGAYRDDNGKPWVLPSVKAAEKLIHNDS---SYNH---------------------------EYLG--ITGLPSLTSNA 82 (412)
T ss_dssp SSCCCBCTTSCBCCCHHHHHHHHHHHTCT---TCCC---------------------------CCCC--TTCCHHHHHHH
T ss_pred eeeeeeCCCCCCCCcHHHHHHHHhhhcCc---cccc---------------------------CCCC--CCCcHHHHHHH
Confidence 556789999888888999998866 5421 0000 0100 01124788888
Q ss_pred HHHhC------CCCCCceEEE--ecCHHHHHHHHH--HhCCCCCCCeEEE-cCCCchhHHHHHHHHHHhcCCEEEEEec-
Q 037063 189 MDFMN------ISEDDYTLVF--TANQSSAFKLLA--ESYPFYSNPRLLT-VYDHENEAAALMIESSKKRGARVSSAEF- 256 (588)
Q Consensus 189 a~~lg------a~~~e~~vvf--t~g~T~al~lv~--~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a~~~G~~v~~v~~- 256 (588)
+++++ +++++ |++ |+|+|+|+.+++ ... +.+||+|++ ...|+. . ...++..|++++.++.
T Consensus 83 a~~~~~~~~~~~~~~~--i~~~~t~g~~~a~~~~~~~~~~-~~~gd~Vl~~~p~~~~-~----~~~~~~~g~~~~~v~~~ 154 (412)
T 1yaa_A 83 AKIIFGTQSDALQEDR--VISVQSLSGTGALHISAKFFSK-FFPDKLVYLSKPTWAN-H----MAIFENQGLKTATYPYW 154 (412)
T ss_dssp HHHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHH-HCTTCCEEEEESCCTT-H----HHHHHTTTCCEEEEECE
T ss_pred HHHHhcCCCCCCCcce--EEEEeccchHhHHHHHHHHHHH-hCCCCEEEEeCCCCcc-H----HHHHHHcCceEEEEeee
Confidence 88883 24554 999 999999999883 233 468999664 444543 2 3455678999999998
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC-CCC-----
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG-SKD----- 326 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~-~~d----- 326 (588)
+..++.+|+++|+++++. . .+.+.++++++++|+||..+|.++ | ++|+++|+++|+|+++.. ..+
T Consensus 155 ~~~~~~~d~~~l~~~l~~----~-~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~ 229 (412)
T 1yaa_A 155 ANETKSLDLNGFLNAIQK----A-PEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKD 229 (412)
T ss_dssp ETTTTEECHHHHHHHHHH----S-CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHH
T ss_pred cCCCCccCHHHHHHHHHh----C-CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccch
Confidence 533677999999999972 0 123567777999999999998765 5 789999999999999632 111
Q ss_pred CCCC-CCCCCC----CcEEEeccCccCCCCCCc--eEEEE--E-----eCc----chhcccCCCCCCCceEeeecCCCcc
Q 037063 327 MDTL-GLSLFK----PDFLICSFYKIFGENPSG--FGCLF--V-----KKS----SASVLSGSTSSVSTIMGIEPSFSEI 388 (588)
Q Consensus 327 ~~~l-~l~~~~----~D~vv~S~~K~~G~~P~G--~G~L~--v-----~~~----~~~~l~~~~~g~~g~v~~~~~~~~~ 388 (588)
..++ .+.... .++++.|++|.+| |.| +|+++ . +++ +++.+......
T Consensus 230 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~--~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-------------- 293 (412)
T 1yaa_A 230 AYAVRLGVEKLSTVSPVFVCQSFAKNAG--MYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRS-------------- 293 (412)
T ss_dssp THHHHHHHHHTTTTCCEEEEEECTTTSC--CGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHT--------------
T ss_pred hHHHHHHHhcCCCCcceEEEeccCCCCC--CcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhh--------------
Confidence 0011 111111 3578899999999 666 79998 5 444 44433321100
Q ss_pred cccccccccccccCCCCCccchhhHHHHHHHHHHHH-----HhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC-eEE
Q 037063 389 IELETLDESSQSKFPESSISGVSSKLVECKGLDHAD-----ALGLILISNRARYLINWLANALMNLHHPHSETGIP-LVR 462 (588)
Q Consensus 389 ~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~-----~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~-~v~ 462 (588)
..++++.... +++..+|+... ...++++.++.+.+++++.+.|.++ +.+ +++
T Consensus 294 ------------~~~~~~~~~~---~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-------~~~~~~~ 351 (412)
T 1yaa_A 294 ------------EVSNPPAYGA---KIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKL-------GTPGNWD 351 (412)
T ss_dssp ------------TTSSCCHHHH---HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------TCSSCCT
T ss_pred ------------ccCCCChHHH---HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCCCCee
Confidence 1112222221 34445555331 1136888889999999999999886 100 233
Q ss_pred EeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEE
Q 037063 463 IYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVV 542 (588)
Q Consensus 463 i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~v 542 (588)
++.| .++++.|. + ++...+.++++++||.++. .+
T Consensus 352 ~~~~-----~~~~~~~~--~-----~~~~~~~~~l~~~gi~v~~----------------------------------~~ 385 (412)
T 1yaa_A 352 HIVN-----QCGMFSFT--G-----LTPQMVKRLEETHAVYLVA----------------------------------SG 385 (412)
T ss_dssp HHHH-----CCSSEEEC--C-----CCHHHHHHHHHHHCEECCT----------------------------------TS
T ss_pred eecc-----CceEEEee--C-----CCHHHHHHHHHhCCEEecc----------------------------------Cc
Confidence 3332 24444432 2 3456678888888998753 37
Q ss_pred EEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 543 TAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 543 RvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
|+|++. .+.+|++++++.|+++++
T Consensus 386 Ris~~~-~~~~~i~~~~~~l~~~~~ 409 (412)
T 1yaa_A 386 RASIAG-LNQGNVEYVAKAIDEVVR 409 (412)
T ss_dssp EEEGGG-CCTTTHHHHHHHHHHHHH
T ss_pred EEEEcc-CCHhHHHHHHHHHHHHHH
Confidence 999985 489999999999999875
No 179
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.84 E-value=1e-19 Score=196.26 Aligned_cols=353 Identities=11% Similarity=0.049 Sum_probs=219.9
Q ss_pred CCeeeecCC------CCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYI------GHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a------~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|+|.+ ..|+.++.+++++.+.+.. . . . + ... + ...+...+
T Consensus 48 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~-~-~-~-~--------------------~~~-----~-~~~~~~~~ 97 (449)
T 3a8u_X 48 KGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLST-L-D-Y-S--------------------PGF-----Q-YGHPLSFQ 97 (449)
T ss_dssp TCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTT-C-S-C-C--------------------CSS-----S-CCCHHHHH
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHh-C-C-C-c--------------------ccc-----c-cCCHHHHH
Confidence 467899985 3455688999998766532 1 1 1 0 000 0 01356679
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC--------CCCeEE-EcCCCchhHHHHHHHHHH----hcC--
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY--------SNPRLL-TVYDHENEAAALMIESSK----KRG-- 248 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~--------~gd~ll-~~~e~~s~~~~~~~~~a~----~~G-- 248 (588)
++++++++++.+++ .|+||+|+|+|+.+++..+ .. ++++|+ ....||......+ .... +.+
T Consensus 98 l~~~la~~~~~~~~--~v~~~~ggsea~~~al~~~-~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~-~~~g~~~~~~~~~ 173 (449)
T 3a8u_X 98 LAEKITDLTPGNLN--HVFFTDSGSECALTAVKMV-RAYWRLKGQATKTKMIGRARGYHGVNIAGT-SLGGVNGNRKLFG 173 (449)
T ss_dssp HHHHHHTTSSTTEE--EEEEESSHHHHHHHHHHHH-HHHHHHTTCTTCCEEEEETTCCCCSSHHHH-HHCCCHHHHTTTC
T ss_pred HHHHHHHhCCCCCC--EEEEcCcHHHHHHHHHHHH-HHHHHhcCCCCCCEEEEECCCcCCCChhhh-hccCChhhccccC
Confidence 99999999987654 4999999999999998876 32 567866 4666765333232 1110 001
Q ss_pred ---CEEEEEeccC--CC--CccC--------HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHH
Q 037063 249 ---ARVSSAEFAW--PN--LRIH--------SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVA 308 (588)
Q Consensus 249 ---~~v~~v~~~~--~~--~~i~--------~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a 308 (588)
..+..++++. .. ..+| +++|+++|++ ...+++++|++..++++||.+.| +++| ++|
T Consensus 174 ~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~----~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~ 249 (449)
T 3a8u_X 174 QPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIEL----HDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREIC 249 (449)
T ss_dssp CCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHH----HCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHH
T ss_pred CCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHh----cCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHH
Confidence 1345555431 11 0145 8899999872 11135788888888888999999 9999 999
Q ss_pred HHcCcEEEEeCCCc-CCCCCC--CCCCCCCCCcEEEeccCccCCCCC-CceEEEEEeCcchhcccCCCCCCCceEeeecC
Q 037063 309 AEKGWHVLLDATAL-GSKDMD--TLGLSLFKPDFLICSFYKIFGENP-SGFGCLFVKKSSASVLSGSTSSVSTIMGIEPS 384 (588)
Q Consensus 309 ~~~g~~vvvDaa~~-~~~d~~--~l~l~~~~~D~vv~S~~K~~G~~P-~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~ 384 (588)
+++|+++|+|+++. ++..-. .++.....+|++ ++.|.+|. . ..+|++++++++++.+....... ..
T Consensus 250 ~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--s~sK~l~~-G~~~~G~~~~~~~~~~~l~~~~~~~-~~------ 319 (449)
T 3a8u_X 250 NQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--CIAKQVTN-GAIPMGAVIASTEIYQTFMNQPTPE-YA------ 319 (449)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSSCCEEEEEEHHHHHHHHTCSSCT-TS------
T ss_pred HHhCCEEEEeccccCccccCcchhhhhcCCCCCEE--EEcccccC-CCCceEEEEECHHHHHHhhccCccc-cc------
Confidence 99999999999984 442101 111111237876 66798872 1 23899999988877665421100 00
Q ss_pred CCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEe
Q 037063 385 FSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIY 464 (588)
Q Consensus 385 ~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~ 464 (588)
..|...+|.+...+ ..++..++|+.+++ +.+.++++++.+++++.|.++. +.+.+..+
T Consensus 320 ------------~~~~~~~t~~~~~~-~~aa~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~------~~~~~~~~ 377 (449)
T 3a8u_X 320 ------------VEFPHGYTYSAHPV-ACAAGLAALCLLQK---ENLVQSVAEVAPHFEKALHGIK------GAKNVIDI 377 (449)
T ss_dssp ------------CSSCCCCTTTTCHH-HHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHTTT------TSTTEEEE
T ss_pred ------------ccccccCCCcccHH-HHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHh------cCCCeEEE
Confidence 01101223222222 12455577777665 3567888899999999998752 12333221
Q ss_pred CCCCCCCcccEEEEEeecCCCCC-cCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEE
Q 037063 465 GPKVMFDRGPSLAFNVFDWNGTR-IDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVT 543 (588)
Q Consensus 465 ~p~~~~~rg~iv~f~~~~~~g~~-i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vR 543 (588)
. ..|.++.+.+.+..... .++..+.+.|.++||.++.+ . ..||
T Consensus 378 ~-----~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-----------------------------g--~~iR 421 (449)
T 3a8u_X 378 R-----NFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFG-----------------------------G--DTLQ 421 (449)
T ss_dssp E-----EETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEE-----------------------------T--TEEE
T ss_pred e-----eeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecC-----------------------------C--CEEE
Confidence 1 24678888876421100 01234666666779998864 1 2899
Q ss_pred EecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 544 AALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 544 vSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+|+++.++.+|++++++.|++++++
T Consensus 422 is~~~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 422 FGPTFNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EECCCcCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998764
No 180
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.84 E-value=8.3e-19 Score=188.92 Aligned_cols=330 Identities=10% Similarity=0.081 Sum_probs=216.9
Q ss_pred CCCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|..+..|+|..+. |..++.+++++.+.+.... +. | +. + ..+..
T Consensus 72 d~~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~--~~-~--------------------~~-----~---~~~~~ 120 (439)
T 2oat_A 72 DVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLT--LT-S--------------------RA-----F---YNNVL 120 (439)
T ss_dssp ETTCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCS--CC-C--------------------TT-----S---EESSH
T ss_pred ECCCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcC--cc-c--------------------Cc-----c---CCHHH
Confidence 3357789998762 2256788888866653211 11 0 00 0 02345
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--------CCCC-CeEE-EcCCCchhHHHHHHHHHHhcC---
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--------FYSN-PRLL-TVYDHENEAAALMIESSKKRG--- 248 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--------~~~g-d~ll-~~~e~~s~~~~~~~~~a~~~G--- 248 (588)
.++++++++++|. + .|+|++|+++|+.+++..+. ..+| ++|+ ....||......+ ...|
T Consensus 121 ~~l~~~la~~~g~--~--~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~----~~~g~~~ 192 (439)
T 2oat_A 121 GEYEEYITKLFNY--H--KVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAI----SSSTDPT 192 (439)
T ss_dssp HHHHHHHHHHHTC--S--EEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHH----TTCCCHH
T ss_pred HHHHHHHHHhcCC--C--EEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHh----hcCCChh
Confidence 6888999999974 3 49999999999999888752 1356 6755 5556665333221 1222
Q ss_pred ---------CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccC----CHHHH-HHHHHcCcE
Q 037063 249 ---------ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARY----SYMWM-SVAAEKGWH 314 (588)
Q Consensus 249 ---------~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~----pl~~I-~~a~~~g~~ 314 (588)
..+..+|.+ |.++|+++|.. +++++|++..+++++|.+. ++++| ++|+++|++
T Consensus 193 ~~~~~~p~~~~v~~~~~~------d~~~le~~l~~-------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gil 259 (439)
T 2oat_A 193 SYDGFGPFMPGFDIIPYN------DLPALERALQD-------PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVL 259 (439)
T ss_dssp HHTTSCSCCTTEEEECSS------CHHHHHHHTTS-------TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCE
T ss_pred cccCCCCCCCCeEEeCCC------CHHHHHHHhCC-------CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 456666542 78999998841 5688999988888899887 69999 999999999
Q ss_pred EEEeCCCcC-CCCCC--CCCCCCCCCcEEEeccCccCCCCC-CceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccc
Q 037063 315 VLLDATALG-SKDMD--TLGLSLFKPDFLICSFYKIFGENP-SGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIE 390 (588)
Q Consensus 315 vvvDaa~~~-~~d~~--~l~l~~~~~D~vv~S~~K~~G~~P-~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~ 390 (588)
+|+|+++.. +..-. .++.....+|++ ++.|.+|. + ..+|++++++++++.+.+...+ +
T Consensus 260 lI~DEv~~g~g~~g~~~~~~~~~~~~Di~--t~sK~l~~-G~~~~G~v~~~~~~~~~l~~~~~~--~------------- 321 (439)
T 2oat_A 260 FIADEIQTGLARTGRWLAVDYENVRPDIV--LLGKALSG-GLYPVSAVLCDDDIMLTIKPGEHG--S------------- 321 (439)
T ss_dssp EEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEECHHHHTTSCTTSSC--C-------------
T ss_pred EEEeccccCCccCCcchhHHHhCCCCcEE--EecccccC-CCCCeEEEEECHHHHhccCCCCcc--c-------------
Confidence 999999842 21101 111112347976 77898872 2 3499999999887766542211 0
Q ss_pred cccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCC
Q 037063 391 LETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMF 470 (588)
Q Consensus 391 ~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~ 470 (588)
.| +.+..+ .++..++|+.+.+ +.+.++++.+.+++.+.|.++. .+.+..+.
T Consensus 322 -------t~----~~~~~~---~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~-------~~~~~~~~----- 372 (439)
T 2oat_A 322 -------TY----GGNPLG---CRVAIAALEVLEE---ENLAENADKLGIILRNELMKLP-------SDVVTAVR----- 372 (439)
T ss_dssp -------SS----TTCHHH---HHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTSC-------TTTEEEEE-----
T ss_pred -------CC----CcCHHH---HHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHhc-------CCCcEEEE-----
Confidence 01 112122 2444567777655 3567889999999999998872 23332111
Q ss_pred CcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCC
Q 037063 471 DRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLT 550 (588)
Q Consensus 471 ~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~ 550 (588)
..|.++.+.+.+..+ .+...+.+.|.++||.++++ +...||+++++..
T Consensus 373 ~~g~~~~v~l~~~~~--~~~~~l~~~l~~~Gv~v~~~------------------------------~~~~iRi~~~~~~ 420 (439)
T 2oat_A 373 GKGLLNAIVIKETKD--WDAWKVCLRLRDNGLLAKPT------------------------------HGDIIRFAPPLVI 420 (439)
T ss_dssp EETTEEEEEECCCSS--CCHHHHHHHHHHTTEECCBS------------------------------SSSEEEECCCTTC
T ss_pred eeeeEEEEEEecCcc--HHHHHHHHHHHHCCeEEecC------------------------------CCCEEEEECccCC
Confidence 246788887764211 24566777777789998753 1128999999999
Q ss_pred CHHHHHHHHHHHHHhhhh
Q 037063 551 NFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 551 t~eDv~~li~~l~~~l~~ 568 (588)
+.||++++++.|++++++
T Consensus 421 t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 421 KEDELRESIEIINKTILS 438 (439)
T ss_dssp CHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999988753
No 181
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.84 E-value=2.3e-19 Score=196.37 Aligned_cols=309 Identities=13% Similarity=0.034 Sum_probs=198.8
Q ss_pred HHHHHHHHHHHHh-CCCCCCceEEEecCHHHHHHHHHHhCCCCCCC----eEEEc-CCCchhHHHHHHHHHHhcCCEEEE
Q 037063 180 LESKIRKRIMDFM-NISEDDYTLVFTANQSSAFKLLAESYPFYSNP----RLLTV-YDHENEAAALMIESSKKRGARVSS 253 (588)
Q Consensus 180 ~~~~~r~~ia~~l-ga~~~e~~vvft~g~T~al~lv~~s~~~~~gd----~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~ 253 (588)
+.+.+.+.+.+.. |.+.+..+|++|+|+++|+.+++.++ .++|| +|+++ ..|++ . ...++..|++++.
T Consensus 134 lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l-~~~gd~~~d~Vlv~~p~y~~-~----~~~~~~~g~~~v~ 207 (498)
T 3ihj_A 134 IREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKIL-VSGGGKSRTGVMIPIPQYPL-Y----SAVISELDAIQVN 207 (498)
T ss_dssp HHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHH-CCCCGGGSEEEEEEESCCTH-H----HHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHH-cCCCCCCCCEEEEeCCCchh-H----HHHHHHcCCEEEE
Confidence 3334444444444 45433345999999999999999998 77775 76654 44542 2 3345667999999
Q ss_pred EeccCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcCCC-CC
Q 037063 254 AEFAWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALGSK-DM 327 (588)
Q Consensus 254 v~~~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~~~-d~ 327 (588)
++++.. ++.+|+++|+++|+.. ....++++|++.+++||||..+|.+. | ++|+++|+++|+|.+..... +-
T Consensus 208 ~~~~~~~~~~~d~~~le~~l~~~---~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~ 284 (498)
T 3ihj_A 208 YYLDEENCWALNVNELRRAVQEA---KDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSP 284 (498)
T ss_dssp EECBGGGTTBCCHHHHHHHHHHH---TTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCT
T ss_pred eeccccccCCCCHHHHHHHHHhh---hccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCC
Confidence 998732 3578999999999821 11126899999999999999999766 5 78999999999999954421 00
Q ss_pred C--CCCCCC----------CCC-cEEEeccCccC-CCCCCceEEEEE---eCcchhcccCCCCCCCceEeeecCCCcccc
Q 037063 328 D--TLGLSL----------FKP-DFLICSFYKIF-GENPSGFGCLFV---KKSSASVLSGSTSSVSTIMGIEPSFSEIIE 390 (588)
Q Consensus 328 ~--~l~l~~----------~~~-D~vv~S~~K~~-G~~P~G~G~L~v---~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~ 390 (588)
. ...+.. ..+ -+++.|++|.| |.+..++|++++ ++++++.+......
T Consensus 285 ~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~---------------- 348 (498)
T 3ihj_A 285 DCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSV---------------- 348 (498)
T ss_dssp TCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHH----------------
T ss_pred CCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhc----------------
Confidence 0 011100 012 25677999987 743456899885 55555544322100
Q ss_pred cccccccccccCCCCCccchhhHHHHHHHH-----------HHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC
Q 037063 391 LETLDESSQSKFPESSISGVSSKLVECKGL-----------DHADALGLILISNRARYLINWLANALMNLHHPHSETGIP 459 (588)
Q Consensus 391 ~~~~~~~~f~e~GT~~~~~~~~~~al~~aL-----------~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~ 459 (588)
.. +++..+. .++..++ +++.. ++.+.+++++.++++.+.|.++ |
T Consensus 349 ----------~~-~~~~~~q---~a~~~~l~~~~~g~~~~~~~~~~--~~~~~~~l~~~~~~l~~~L~~~---------~ 403 (498)
T 3ihj_A 349 ----------RL-CPPVSGQ---AAMDIVVNPPVAGEESFEQFSRE--KESVLGNLAKKAKLTEDLFNQV---------P 403 (498)
T ss_dssp ----------SC-CCCHHHH---HHHHHHTCCCCTTSTTHHHHHHH--HHHHHHHHHHHHHHHHHHHHTS---------T
T ss_pred ----------cC-CCCHHHH---HHHHHHhcCCccCcccHHHHHHH--HHHHHHHHHHHHHHHHHHHhcC---------C
Confidence 00 1111111 2233333 12222 3667788888999999999874 6
Q ss_pred eEEEeCCCCCCCcccEEEE-EeecCCC-------CCcCHHH--HHHHHHhCCcEeccccccCcccccchHHHHHHHHhhh
Q 037063 460 LVRIYGPKVMFDRGPSLAF-NVFDWNG-------TRIDPAL--VQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETR 529 (588)
Q Consensus 460 ~v~i~~p~~~~~rg~iv~f-~~~~~~g-------~~i~~~~--v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~ 529 (588)
+++++.| .++++.| .+....+ ..++.+. +.++|.+.||.+.+|..|...
T Consensus 404 g~~~~~p-----~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~---------------- 462 (498)
T 3ihj_A 404 GIHCNPL-----QGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQR---------------- 462 (498)
T ss_dssp TEECCCC-----CBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCC----------------
T ss_pred CcEecCC-----CeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCC----------------
Confidence 7877654 4566655 3321100 0134444 578888899999998766310
Q ss_pred cCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 530 SGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 530 ~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.|...+|+|++ .+.+|++++++.|++++++
T Consensus 463 -------~~~~~~Ris~~--~~~e~l~~~i~~L~~~~~~ 492 (498)
T 3ihj_A 463 -------EGTYHFRMTIL--PPVEKLKTVLQKVKDFHIN 492 (498)
T ss_dssp -------TTCCBEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred -------CCCCEEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 22238999985 7899999999999998865
No 182
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.84 E-value=8.4e-19 Score=187.50 Aligned_cols=332 Identities=10% Similarity=0.067 Sum_probs=210.5
Q ss_pred CCeeeecCCCCC---CC----CHHHHHHhhhhcccCc-CCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 110 NNYVCFDYIGHG---LF----SYSQMHSCSSNVHSSA-ASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 110 ~~~vyLD~a~~g---l~----~~~~~~~~~~~~~~~~-~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
.+..|+|+++.. ++ ++.+++++.+.+.... ++++ .| ..+..
T Consensus 40 ~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~~~~~----------------------------~~---~~~~~ 88 (419)
T 2eo5_A 40 DGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHAAAN----------------------------DF---YNIPQ 88 (419)
T ss_dssp TSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCCCSCS----------------------------CS---CCHHH
T ss_pred CCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCcccccc----------------------------cc---CCHHH
Confidence 567899996543 22 7889998876653211 1100 00 02445
Q ss_pred HHHHHHHHHHhCCC-CCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHHH-----Hhc-----CC
Q 037063 182 SKIRKRIMDFMNIS-EDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIESS-----KKR-----GA 249 (588)
Q Consensus 182 ~~~r~~ia~~lga~-~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~a-----~~~-----G~ 249 (588)
.++++++++++|++ ++ .|+||+|+++|+.+++..+...+|++|++ ...||......+ ... .+. +.
T Consensus 89 ~~l~~~la~~~~~~~~~--~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~-~~~~~~~~~~~~~~~~~~ 165 (419)
T 2eo5_A 89 LELAKKLVTYSPGNFQK--KVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSI-SLTASKAVQRSIVGPFMP 165 (419)
T ss_dssp HHHHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHH-HHCCSCGGGGCSSCCCCT
T ss_pred HHHHHHHHHhCCCCcCC--EEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhH-hhcCCccccccccCCCCC
Confidence 68889999999986 44 49999999999999887541112788664 445554233221 110 111 23
Q ss_pred EEEEEeccCCCCc----------------cCHHHHH-HHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HH
Q 037063 250 RVSSAEFAWPNLR----------------IHSGKLM-KKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SV 307 (588)
Q Consensus 250 ~v~~v~~~~~~~~----------------i~~e~l~-~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~ 307 (588)
.++.++.+ .+.. ++.++|+ ++|++ ....+++++|++..++|+||.+.| +++| ++
T Consensus 166 ~~~~v~~~-~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~---~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l 241 (419)
T 2eo5_A 166 GVIHVPYP-NPYRNPWHINGYENPSELVNRVIEFIEDYIFVN---LVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKL 241 (419)
T ss_dssp TEEEECCC-CSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHH---TCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHH
T ss_pred CCEEECCC-ccccccccccccccchhhHHHHHHHHHHHHHhh---ccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHH
Confidence 67777774 2221 4578888 88862 001135778888877888999887 9999 99
Q ss_pred HHHcCcEEEEeCCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCC-CceEEEEEeCcchhcccCCCCCCCceEeeec
Q 037063 308 AAEKGWHVLLDATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENP-SGFGCLFVKKSSASVLSGSTSSVSTIMGIEP 383 (588)
Q Consensus 308 a~~~g~~vvvDaa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P-~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~ 383 (588)
|+++|+++|+|+++. ++.. ...++.....+|++ ++.|.+|. + .++|+++++++++ .+ ....+ ++
T Consensus 242 ~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~-G~~riG~~~~~~~~~-~~-~~~~~--~t----- 309 (419)
T 2eo5_A 242 AKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI--TLAKALGG-GIMPIGATIFRKDLD-FK-PGMHS--NT----- 309 (419)
T ss_dssp HHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TTSCCEEEEEEGGGC-CC---------C-----
T ss_pred HHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE--EecccccC-CccceEEEEEchHhh-cC-CcccC--CC-----
Confidence 999999999999976 3311 11111112347866 57798874 5 7899999999876 54 21111 00
Q ss_pred CCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEE
Q 037063 384 SFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRI 463 (588)
Q Consensus 384 ~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i 463 (588)
| +.|..+ .++..++|+.+++ +.++++.+++++.+.|.++ ...++
T Consensus 310 ---------------~----~~n~~~---~~aa~aal~~~~~-----~~~~~~~~~~~l~~~L~~~--------~~~~~- 353 (419)
T 2eo5_A 310 ---------------F----GGNALA---CAIGSKVIDIVKD-----LLPHVNEIGKIFAEELQGL--------ADDVR- 353 (419)
T ss_dssp ---------------C----CCCHHH---HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHTTS--------SSEEE-
T ss_pred ---------------C----CCCHHH---HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHh--------hhheE-
Confidence 0 112222 2455566765432 7788889999999998763 11121
Q ss_pred eCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEE
Q 037063 464 YGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVT 543 (588)
Q Consensus 464 ~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vR 543 (588)
..+.++.+.+... + .... +.+.|.++||.++.+. ..+||
T Consensus 354 -------~~g~~~~i~~~~~-~--~~~~-~~~~l~~~Gv~v~~~~------------------------------~~~lR 392 (419)
T 2eo5_A 354 -------GIGLAWGLEYNEK-K--VRDR-IIGESFKRGLLLLPAG------------------------------RSAIR 392 (419)
T ss_dssp -------EETTEEEEECSCH-H--HHHH-HHHHHHHTTEECEEET------------------------------TTEEE
T ss_pred -------eeeEEEEEEEecC-c--cHHH-HHHHHHHCCCEEecCC------------------------------CCEEE
Confidence 2466777766310 0 1134 6666668999988641 12899
Q ss_pred EecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 544 AALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 544 vSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+|+++.++.||++++++.|++++++
T Consensus 393 is~~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 393 VIPPLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999988754
No 183
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.84 E-value=2.4e-20 Score=197.84 Aligned_cols=331 Identities=12% Similarity=0.060 Sum_probs=215.1
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|+|+++. |..++.+.+++.+.+.... ..+ + .+ ..+...+
T Consensus 37 ~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~-~~~----------------------~-----~~---~~~~~~~ 85 (406)
T 4adb_A 37 QGKEYIDFAGGIAVNALGHAHPELREALNEQASKFW-HTG----------------------N-----GY---TNEPVLR 85 (406)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCS-CCC----------------------T-----TS---CCHHHHH
T ss_pred CCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhcc-ccc----------------------C-----Cc---CCHHHHH
Confidence 56789998876 2337788888766553211 000 0 00 1355789
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC-------CC-CeEE-EcCCCchhHHHHHHHHHHh--------
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY-------SN-PRLL-TVYDHENEAAALMIESSKK-------- 246 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~-------~g-d~ll-~~~e~~s~~~~~~~~~a~~-------- 246 (588)
++++++++++.+ .|+||+|+|+|+.+++..+ .. +| ++|+ ....||...... ......
T Consensus 86 l~~~la~~~~~~----~v~~~~gg~~a~~~al~~~-~~~~~~~~~~g~~~vi~~~~~y~~~~~~~-~~~~~~~~~~~~~~ 159 (406)
T 4adb_A 86 LAKKLIDATFAD----RVFFCNSGAEANEAALKLA-RKFAHDRYGSHKSGIVAFKNAFHGRTLFT-VSAGGQPAYSQDFA 159 (406)
T ss_dssp HHHHHHHHSSCS----EEEEESSHHHHHHHHHHHH-HHHHHHHTCTTCCEEEEETTCCCCSSHHH-HHHSSCGGGTGGGC
T ss_pred HHHHHHhhCCCC----eEEEeCcHHHHHHHHHHHH-HHHHHhcCCCCCcEEEEECCCcCCCcHHH-hhccCCccccccCC
Confidence 999999999874 4999999999999998876 33 55 7754 556666533322 111100
Q ss_pred -cCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccC-----CHHHH-HHHHHcCcEEEEeC
Q 037063 247 -RGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARY-----SYMWM-SVAAEKGWHVLLDA 319 (588)
Q Consensus 247 -~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~-----pl~~I-~~a~~~g~~vvvDa 319 (588)
.+..+..++. .|+++|+++++ +++++|+++ ++|++|..+ ++++| ++|+++|+++|+|+
T Consensus 160 ~~~~~~~~~~~------~d~~~l~~~l~--------~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De 224 (406)
T 4adb_A 160 PLPADIRHAAY------NDINSASALID--------DSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDE 224 (406)
T ss_dssp SCCSSEEEECT------TCHHHHHTTCS--------TTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCCceEeCC------CcHHHHHHHhc--------CCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 0134445543 36888888887 789999999 789999776 46777 89999999999999
Q ss_pred CCc-CCCCCCCC--CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccc
Q 037063 320 TAL-GSKDMDTL--GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDE 396 (588)
Q Consensus 320 a~~-~~~d~~~l--~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~ 396 (588)
++. ++..-..+ +.....+|++ +++|.+| ++.++|++++++++++.+.+...+. .
T Consensus 225 ~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~-~G~r~G~~~~~~~~~~~~~~~~~~~--~------------------ 281 (406)
T 4adb_A 225 VQTGVGRTGELYAYMHYGVTPDLL--TTAKALG-GGFPVGALLATEECARVMTVGTHGT--T------------------ 281 (406)
T ss_dssp TTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-TTSCCEEEEECHHHHHTCCTTSSCC--S------------------
T ss_pred cccCCCccchhHHHHhcCCCCCEE--Eechhhc-CCCCeEEEEEcHHHHhhhccCCcCC--C------------------
Confidence 975 22111111 1112237877 5699888 3456999999998887776543221 0
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE
Q 037063 397 SSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL 476 (588)
Q Consensus 397 ~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv 476 (588)
| +.+... .++..++|+.+. .+.+.++.+++++++.+.|.++... .+.+.-. ...+.++
T Consensus 282 --~----~~~~~~---~~a~~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~-----~~~~~~~-----~~~g~~~ 339 (406)
T 4adb_A 282 --Y----GGNPLA---SAVAGKVLELIN---TPEMLNGVKQRHDWFVERLNTINHR-----YGLFSEV-----RGLGLLI 339 (406)
T ss_dssp --S----TTCHHH---HHHHHHHHHHHS---SHHHHHHHHHHHHHHHHHHHHHHHH-----HCCEEEE-----EEETTEE
T ss_pred --C----CCCHHH---HHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHHh-----CCCceEE-----EEEEEEE
Confidence 0 111111 134445555543 2778888899999999988875100 0111111 1246788
Q ss_pred EEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHH
Q 037063 477 AFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTY 556 (588)
Q Consensus 477 ~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~ 556 (588)
.+.+.+.. ..+...+.+.|.++||.++.+. ...||+++++.++.||++
T Consensus 340 ~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~~------------------------------~~~iRi~~~~~~~~e~i~ 387 (406)
T 4adb_A 340 GCVLNADY--AGQAKQISQEAAKAGVMVLIAG------------------------------GNVVRFAPALNVSEEEVT 387 (406)
T ss_dssp EEEECTTT--TTCHHHHHHHHHHTTEECEESS------------------------------TTEEEECCCTTCCHHHHH
T ss_pred EEEEeCCc--HHHHHHHHHHHHHCCcEEeecC------------------------------CCeEEEECCCCCCHHHHH
Confidence 88876521 1246677777777899987641 128999999999999999
Q ss_pred HHHHHHHHhhhhh
Q 037063 557 RLWAFVSRFLDAD 569 (588)
Q Consensus 557 ~li~~l~~~l~~~ 569 (588)
++++.|++++++.
T Consensus 388 ~~~~~l~~~l~~~ 400 (406)
T 4adb_A 388 TGLDRFAAACEHF 400 (406)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988653
No 184
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.84 E-value=3.1e-20 Score=197.65 Aligned_cols=335 Identities=12% Similarity=0.044 Sum_probs=214.2
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
..-.|+|..+..+.++.+.+++.+.+.. .+..+ .|+. ..-..++|+.|+
T Consensus 36 ~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~---------------------------~y~~--~~g~~~lr~~la 84 (412)
T 1ajs_A 36 GVGAYRTDDCQPWVLPVVRKVEQRIANN--SSLNH---------------------------EYLP--ILGLAEFRTCAS 84 (412)
T ss_dssp CSCCCCCTTSCCCCCHHHHHHHHHHHTC--TTCCC---------------------------CCCC--TTCCHHHHHHHH
T ss_pred ccceecCCCCCccccHHHHHHHHHhhhC--hhhcc---------------------------CCCC--CCCCHHHHHHHH
Confidence 4556778777777778888887544311 00000 0110 011258899999
Q ss_pred HHh-CC-----CCCCceEEE--ecCHHHHHHHHHH--hCCCCCC-----CeEEE-cCCCchhHHHHHHHHHHhcCCE-EE
Q 037063 190 DFM-NI-----SEDDYTLVF--TANQSSAFKLLAE--SYPFYSN-----PRLLT-VYDHENEAAALMIESSKKRGAR-VS 252 (588)
Q Consensus 190 ~~l-ga-----~~~e~~vvf--t~g~T~al~lv~~--s~~~~~g-----d~ll~-~~e~~s~~~~~~~~~a~~~G~~-v~ 252 (588)
+++ +. ++++ |+| |+|+++|+.+++. .+ +++| |+|++ ...|+. . ...++..|++ ++
T Consensus 85 ~~~~~~~~~~~~~~~--v~~~~t~gg~~a~~~~~~~~~~-~~~g~~~~~d~Vl~~~p~y~~-~----~~~~~~~g~~~~~ 156 (412)
T 1ajs_A 85 RLALGDDSPALQEKR--VGGVQSLGGTGALRIGAEFLAR-WYNGTNNKDTPVYVSSPTWEN-H----NGVFTTAGFKDIR 156 (412)
T ss_dssp HHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHH-HSSSSSCCCSCEEEEESCCTH-H----HHHHHHTTCSCEE
T ss_pred HHHhcCCCCccCCCc--EEEEECCCcHHHHHHHHHHHHH-hCcCcCCCCCeEEEcCCCcHH-H----HHHHHHcCCceeE
Confidence 998 53 5554 999 9999999999864 33 5688 88664 445553 2 3455678999 99
Q ss_pred EEeccC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCc-CCCC
Q 037063 253 SAEFAW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATAL-GSKD 326 (588)
Q Consensus 253 ~v~~~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~-~~~d 326 (588)
.++.+. .++.+|+++|++++.+ ...+++++++++++|+||..+|.++ | ++|+++|+++|+|++.. +...
T Consensus 157 ~~~~~~~~~~~~d~~~l~~~l~~-----~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~ 231 (412)
T 1ajs_A 157 SYRYWDTEKRGLDLQGFLSDLEN-----APEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASG 231 (412)
T ss_dssp EEECEETTTTEECHHHHHHHHHH-----SCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTS
T ss_pred EEeeecCCCCccCHHHHHHHHHh-----CCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCC
Confidence 998842 4567899999999972 1136789999999999999998765 6 88999999999999943 3211
Q ss_pred -----CCCCC-CC-CCCCcEEEeccCccCCCCCCc--eEEEEE---eCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 327 -----MDTLG-LS-LFKPDFLICSFYKIFGENPSG--FGCLFV---KKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 327 -----~~~l~-l~-~~~~D~vv~S~~K~~G~~P~G--~G~L~v---~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
..++. +. ....++++.|++|.+| +.| +|++++ +++.++.+...... . .
T Consensus 232 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~--~~G~riG~~~~~~~~~~~~~~~~~~~~~---~--------------~- 291 (412)
T 1ajs_A 232 NLEKDAWAIRYFVSEGFELFCAQSFSKNFG--LYNERVGNLTVVAKEPDSILRVLSQMQK---I--------------V- 291 (412)
T ss_dssp CHHHHTHHHHHHHHTTCCEEEEEECTTTSC--CGGGCEEEEEEECSSHHHHHHHHHHHHH---H--------------H-
T ss_pred cccccchHHHHHhccCCcEEEEEecccccC--CCCcceEEEEEecCCHHHHHHHHHHHHH---H--------------H-
Confidence 00111 11 1113488999999999 566 899999 66533322110000 0 0
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHHH-----HhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCC
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDHAD-----ALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVM 469 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~l~-----~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~ 469 (588)
++ ..++++.... +++..+|+... ...++++.++++.+++++.+.|.++..+ ..++++.|
T Consensus 292 ---~~-~~~~~~~~~~---~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~------~~~~~~~~--- 355 (412)
T 1ajs_A 292 ---RV-TWSNPPAQGA---RIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTP------GTWNHITD--- 355 (412)
T ss_dssp ---HT-TTSSCCSHHH---HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS------SCCHHHHH---
T ss_pred ---hc-ccCCCChHHH---HHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC------CCeeEEcC---
Confidence 00 1112222221 34445665432 1136788899999999999999986211 02333322
Q ss_pred CCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC
Q 037063 470 FDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL 549 (588)
Q Consensus 470 ~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~ 549 (588)
.++++.|. + ++...+.+++.++||.++. .+|+|++.
T Consensus 356 --~~~~~~~~--~-----~~~~~~~~~l~~~gv~v~~----------------------------------~~Ris~~~- 391 (412)
T 1ajs_A 356 --QIGMFSFT--G-----LNPKQVEYLINQKHIYLLP----------------------------------SGRINMCG- 391 (412)
T ss_dssp --CCSSEEEC--C-----CCHHHHHHHHHTTCEECCT----------------------------------TSEEEGGG-
T ss_pred --CCceEEEe--C-----CCHHHHHHHHHhCCEEecC----------------------------------CcEEEeee-
Confidence 24444442 2 3356677888899998763 26999984
Q ss_pred CCHHHHHHHHHHHHHhhhh
Q 037063 550 TNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 550 ~t~eDv~~li~~l~~~l~~ 568 (588)
.+.+|++++++.|++++++
T Consensus 392 ~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 392 LTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp CCTTTHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 4889999999999998754
No 185
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.84 E-value=6.9e-20 Score=193.73 Aligned_cols=337 Identities=15% Similarity=0.101 Sum_probs=209.6
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhh-hcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSS-NVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRI 188 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~-~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~i 188 (588)
.--+|+|+.+.++.++.+++++.+ .+... +.. . |+. ..-..++|+.+
T Consensus 32 ~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~--~~~-----------------~-----------y~~--~~g~~~lr~~l 79 (397)
T 3fsl_A 32 SIGLYYNEDGIIPQLQAVAEAEARLNAQPH--GAS-----------------L-----------YLP--MEGLNCYRHAI 79 (397)
T ss_dssp SSCCCCCTTSCCCCCHHHHHHHHHHHHSCC--CCC-----------------C-----------CCC--TTCCHHHHHHH
T ss_pred eeeEEECCCCCccCcHHHHHHHHhhccCcc--ccc-----------------c-----------CCC--CCchHHHHHHH
Confidence 445688888888888999999876 54320 000 0 000 00124788888
Q ss_pred HHHhCC------CCCCceEEEecCHHHHHHHHHH--hCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc-CC
Q 037063 189 MDFMNI------SEDDYTLVFTANQSSAFKLLAE--SYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA-WP 259 (588)
Q Consensus 189 a~~lga------~~~e~~vvft~g~T~al~lv~~--s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~-~~ 259 (588)
+++++. +++...|++|+|+|+|+.+++. ++ +++||+|++....+... ...++..|++++.++.. ..
T Consensus 80 a~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~-~~~gd~vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~ 154 (397)
T 3fsl_A 80 APLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKR-YFPESGVWVSDPTWENH----VAIFAGAGFEVSTYPWYDEA 154 (397)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHH-HCTTCCEEEESSCCHHH----HHHHHHTTCCEEEECCEETT
T ss_pred HHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHh-cCCCCeEEEeCCCchhH----HHHHHHcCCceEEEeeeecc
Confidence 888754 3441159999999999999953 44 67899977655444322 34567789999999982 24
Q ss_pred CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHH---HH-HHHHHcCcEEEEeCCCcCCC-CC----CCC
Q 037063 260 NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYM---WM-SVAAEKGWHVLLDATALGSK-DM----DTL 330 (588)
Q Consensus 260 ~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~---~I-~~a~~~g~~vvvDaa~~~~~-d~----~~l 330 (588)
++.+|.++|++.+++ ..++++++++++++|+||..++.+ +| ++|+++|+++|+|.+..... +. ..+
T Consensus 155 ~~~~d~~~l~~~l~~-----~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 229 (397)
T 3fsl_A 155 TNGVRFNDLLATLKT-----LQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAI 229 (397)
T ss_dssp TTEECHHHHHHHHTT-----CCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHH
T ss_pred CCcCcHHHHHHHHHh-----CCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHH
Confidence 678999999999972 125689999999999999999887 46 78999999999999854321 10 000
Q ss_pred -CC-CCCCCcEEEeccCccCCCCCCceEEEEEeC---cchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 331 -GL-SLFKPDFLICSFYKIFGENPSGFGCLFVKK---SSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 331 -~l-~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~---~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
.+ .....++++.|++|.+|.+..++|++++.. +.++.+...... . . +. ..+++
T Consensus 230 ~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~--~-------------~------~~-~~~~~ 287 (397)
T 3fsl_A 230 RAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKA--T-------------V------RR-NYSSP 287 (397)
T ss_dssp HHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHH--H-------------H------HT-TTSSC
T ss_pred HHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHH--H-------------H------Hh-ccCCC
Confidence 00 122356888999999993223389988632 233222110000 0 0 00 01111
Q ss_pred CccchhhHHHHHHHHHHH-----HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEe
Q 037063 406 SISGVSSKLVECKGLDHA-----DALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNV 480 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l-----~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~ 480 (588)
+.... .++..+++.. ....++++.++++.+++++.+.|.++... .+++++.| .++++.+
T Consensus 288 ~~~~~---~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~------~~~~~~~~-----~~~~~~~-- 351 (397)
T 3fsl_A 288 PNFGA---QVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPE------RNFDYLLN-----QRGMFSY-- 351 (397)
T ss_dssp CSHHH---HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT------SCCTHHHH-----CCSSEEE--
T ss_pred CHHHH---HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------CCceeecC-----CceEEEe--
Confidence 11111 2222223211 01125778888899999999999885100 02333322 2343333
Q ss_pred ecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 481 FDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 481 ~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
.+ ++.+.+.+++.++||.+++| . |+|++..++ +||+++++
T Consensus 352 ~~-----~~~~~~~~~l~~~gi~v~~g---------------------------------~-Ris~~~~~~-~~i~~~~~ 391 (397)
T 3fsl_A 352 TG-----LSAAQVDRLREEFGVYLIAS---------------------------------G-RMCVAGLNT-ANVQRVAK 391 (397)
T ss_dssp CC-----CCHHHHHHHHHTTCEECCTT---------------------------------C-EEEGGGCCT-TTHHHHHH
T ss_pred cC-----CCHHHHHHHHHhCCEEECCC---------------------------------C-eEEEEecCH-hhHHHHHH
Confidence 22 34677888999999998754 1 889876555 77999999
Q ss_pred HHHHhh
Q 037063 561 FVSRFL 566 (588)
Q Consensus 561 ~l~~~l 566 (588)
.|++.+
T Consensus 392 ~l~~~l 397 (397)
T 3fsl_A 392 AFAAVM 397 (397)
T ss_dssp HHHHHC
T ss_pred HHHhhC
Confidence 998753
No 186
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.84 E-value=2e-18 Score=185.63 Aligned_cols=333 Identities=9% Similarity=0.051 Sum_probs=211.1
Q ss_pred CCCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
..+..|+|.++ .|..++.+++++.+.+... .+. | + . + ..+...
T Consensus 62 ~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~--~~~-~--------------------~---~--~---~~~~~~ 110 (433)
T 1z7d_A 62 VNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNL--TIC-S--------------------R---A--F---FSVPLG 110 (433)
T ss_dssp TTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTC--SCC-C--------------------T---T--S---EEHHHH
T ss_pred CCCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhC--CCc-c--------------------C---C--c---CCHHHH
Confidence 35778999766 2225678888886665321 111 0 0 0 0 145667
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC--------CCCC-CeEE-EcCCCchhHHHHHHHHHH----hcC
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP--------FYSN-PRLL-TVYDHENEAAALMIESSK----KRG 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~--------~~~g-d~ll-~~~e~~s~~~~~~~~~a~----~~G 248 (588)
++++++++++|. + .|+||+|+|+|+.+++..+. +.+| ++|+ ....||.....++ .... +.+
T Consensus 111 ~l~~~la~~~g~--~--~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~-~~~g~~~~~~~ 185 (433)
T 1z7d_A 111 ICERYLTNLLGY--D--KVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCI-SASTTKKCTSN 185 (433)
T ss_dssp HHHHHHHHHHTC--S--EEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------
T ss_pred HHHHHHHhhcCC--C--eEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhh-cccCCcccccc
Confidence 899999999984 3 49999999999999887642 2467 7765 4556665322221 1111 001
Q ss_pred -----CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccC----CHHHH-HHHHHcCcEEEEe
Q 037063 249 -----ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARY----SYMWM-SVAAEKGWHVLLD 318 (588)
Q Consensus 249 -----~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~----pl~~I-~~a~~~g~~vvvD 318 (588)
..+..+|. .|+++|+++|.. +++++|++..+++++|.+. ++++| ++|+++|+++|+|
T Consensus 186 ~~p~~~~v~~~~~------~d~~~le~~l~~-------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 252 (433)
T 1z7d_A 186 FGPFAPQFSKVPY------DDLEALEEELKD-------PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVAD 252 (433)
T ss_dssp ------CEEEECT------TCHHHHHHHHTS-------TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCCeEEeCC------CCHHHHHHHhCC-------CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 34555543 278999999941 5789999988888899987 68889 9999999999999
Q ss_pred CCCcC-CCCCC--CCCCCCCCCcEEEeccCccCCCCC-CceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 319 ATALG-SKDMD--TLGLSLFKPDFLICSFYKIFGENP-SGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 319 aa~~~-~~d~~--~l~l~~~~~D~vv~S~~K~~G~~P-~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
+++.. +..-. .++.....+|++ ++.|.+|. . ..+|++++++++++.+.+...+ +
T Consensus 253 Ev~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~~-G~~~~G~v~~~~~~~~~l~~~~~~--~----------------- 310 (433)
T 1z7d_A 253 EVQTGLGRTGKLLCVHHYNVKPDVI--LLGKALSG-GHYPISAVLANDDIMLVIKPGEHG--S----------------- 310 (433)
T ss_dssp CTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TSSCCEEEEECHHHHTTCCTTCCC--C-----------------
T ss_pred cCccCCCcCCcchhhHhcCCCCCEE--EECccccC-CCCCeEEEEECHHHHhhhcccccc--c-----------------
Confidence 99862 21100 111112348876 67798882 3 3489999999887766542211 0
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
.| +.+..+ .++..++|+.+++ +.+.++++.+.+++.+.|.++.. +.+.+.... ..|.
T Consensus 311 ---t~----~~~~~~---~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~~~~~-----~~g~ 367 (433)
T 1z7d_A 311 ---TY----GGNPLA---ASICVEALNVLIN---EKLCENAEKLGGPFLENLKRELK-----DSKIVRDVR-----GKGL 367 (433)
T ss_dssp ---TT----TTCHHH---HHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHT-----TCTTEEEEE-----EETT
T ss_pred ---cC----CCCHHH---HHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHH-----hCCCeEEEE-----eeee
Confidence 01 112222 2444567776655 35677888889999998887510 123332221 2467
Q ss_pred EEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHH
Q 037063 475 SLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFED 554 (588)
Q Consensus 475 iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eD 554 (588)
++.+.+.+.. .+...+.+.|.++||.++++. . ..||+++++..+.||
T Consensus 368 ~~~i~~~~~~---~~~~~~~~~l~~~Gv~v~~~~----------------------------~--~~iRi~~~~~~t~e~ 414 (433)
T 1z7d_A 368 LCAIEFKNEL---VNVLDICLKLKENGLITRDVH----------------------------D--KTIRLTPPLCITKEQ 414 (433)
T ss_dssp EEEEEECTTT---CCHHHHHHHHHHTTEECCEET----------------------------T--TEEEECCCTTCCHHH
T ss_pred EEEEEEccCh---hHHHHHHHHHHHCCeEEecCC----------------------------C--CEEEEECCcCCCHHH
Confidence 8888776421 235667777777899987530 1 289999999999999
Q ss_pred HHHHHHHHHHhhhh
Q 037063 555 TYRLWAFVSRFLDA 568 (588)
Q Consensus 555 v~~li~~l~~~l~~ 568 (588)
|+++++.|++++++
T Consensus 415 i~~~l~~l~~~l~~ 428 (433)
T 1z7d_A 415 LDECTEIIVKTVKF 428 (433)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 187
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.84 E-value=4e-19 Score=190.21 Aligned_cols=328 Identities=9% Similarity=0.029 Sum_probs=213.6
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|||.++. |..++.+++++.+.+... .+. .+ .+ ..+..++
T Consensus 55 ~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~--~~~---------------------~~-----~~---~~~~~~~ 103 (420)
T 2pb2_A 55 QGKEYIDFAGGIAVTALGHCHPALVEALKSQGETL--WHT---------------------SN-----VF---TNEPALR 103 (420)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTC--CCC---------------------CT-----TS---CCHHHHH
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhc--ccc---------------------cC-----cc---CCHHHHH
Confidence 57789998654 455788888886665321 111 00 01 1456789
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC-------CCC-eEE-EcCCCchhHHHHHHHHHHhcCCE----
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY-------SNP-RLL-TVYDHENEAAALMIESSKKRGAR---- 250 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~-------~gd-~ll-~~~e~~s~~~~~~~~~a~~~G~~---- 250 (588)
+++++++++|. + .|+||+|+|+|+.+++..+ .. +|+ +|+ ....||.....++ ...|.+
T Consensus 104 l~~~la~~~g~--~--~v~~~~ggteA~~~al~~~-~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~----~~~g~~~~~~ 174 (420)
T 2pb2_A 104 LGRKLIDATFA--E--RVLFMNSGTEANETAFKLA-RHYACVRHSPFKTKIIAFHNAFHGRSLFTV----SVGGQPKYSD 174 (420)
T ss_dssp HHHHHHHHSSC--S--EEEEESSHHHHHHHHHHHH-HHHHHHHTCTTCCEEEEETTCCCCSSHHHH----HHSSCHHHHT
T ss_pred HHHHHHhhCCC--C--eEEEeCCHHHHHHHHHHHH-HHHhhhccCCCCCEEEEEeCCcCCcCHHHH----HhcCCccccc
Confidence 99999999984 3 4999999999999999876 33 564 655 5556665333222 112322
Q ss_pred --------EEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCcc-C---CHHHH-HHHHHcCcEEEE
Q 037063 251 --------VSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGAR-Y---SYMWM-SVAAEKGWHVLL 317 (588)
Q Consensus 251 --------v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~-~---pl~~I-~~a~~~g~~vvv 317 (588)
+..++. .|+++|+++|+ +++++|++..++|++|.+ + ++++| ++|+++|+++|+
T Consensus 175 ~~~p~~~~~~~~~~------~d~~~le~~i~--------~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~ 240 (420)
T 2pb2_A 175 GFGPKPADIIHVPF------NDLHAVKAVMD--------DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVF 240 (420)
T ss_dssp TSSSCCSCEEEECT------TCHHHHHHHCC--------TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCCCCCeEEecC------CCHHHHHHHhc--------cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEE
Confidence 555554 27899999987 679999999999988862 4 46667 899999999999
Q ss_pred eCCCcC-CCCCCCC--CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 318 DATALG-SKDMDTL--GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 318 Daa~~~-~~d~~~l--~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
|+++.. +..-..+ +.....+|++ +++|.+|. +.++|++++++++++.+.+...+ .+
T Consensus 241 Dev~~g~~~~g~~~~~~~~~~~~dii--t~sK~l~~-G~~iG~~~~~~~l~~~l~~~~~~--~t---------------- 299 (420)
T 2pb2_A 241 DEVQCGMGRTGDLFAYMHYGVTPDIL--TSAKALGG-GFPVSAMLTTQEIASAFHVGSHG--ST---------------- 299 (420)
T ss_dssp ECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSCCEEEEECHHHHTTCC----C--CE----------------
T ss_pred EcCCcCcccCCcHHHHHhcCCCCCeE--EecccccC-CCceEEEEEhHHHHHhhcCCCcC--cc----------------
Confidence 999852 2110111 1112248977 56898873 45699999998876666542211 00
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
| +.+..+ .++..++|+.+++ +.+.++.+++.+++.+.|.++.. +.+.+.... ..|.
T Consensus 300 ----~----~~~~~~---~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~-----~~~~~~~~~-----~~g~ 355 (420)
T 2pb2_A 300 ----Y----GGNPLA---CAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDE-----QFDIFSDIR-----GMGL 355 (420)
T ss_dssp ----E----CCCHHH---HHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHH-----HHCCEEEEE-----EETT
T ss_pred ----c----CcCHHH---HHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHh-----cCCCeEEEE-----ecce
Confidence 0 111111 1344456666543 57788888999999998887510 012232221 2467
Q ss_pred EEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHH
Q 037063 475 SLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFED 554 (588)
Q Consensus 475 iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eD 554 (588)
++.+.+.+..+ .+...+.+.|.++||.++.+. ...||+++++..+.||
T Consensus 356 ~~~v~~~~~~~--~~~~~l~~~l~~~Gi~v~~~~------------------------------~~~iRl~~~~~~t~ee 403 (420)
T 2pb2_A 356 LIGAELKPKYK--GRARDFLYAGAEAGVMVLNAG------------------------------ADVMRFAPSLVVEEAD 403 (420)
T ss_dssp EEEEEECGGGT--TCHHHHHHHHHHTTEECEESS------------------------------TTEEEECCCTTCCHHH
T ss_pred EEEEEECCCch--HHHHHHHHHHHHCCCEEEeCC------------------------------CCEEEEECCCCCCHHH
Confidence 88887754210 135667777777999987641 1289999999999999
Q ss_pred HHHHHHHHHHhhhh
Q 037063 555 TYRLWAFVSRFLDA 568 (588)
Q Consensus 555 v~~li~~l~~~l~~ 568 (588)
++++++.|++++++
T Consensus 404 i~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 404 IHEGMQRFAQAVGK 417 (420)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 188
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.84 E-value=3e-20 Score=197.05 Aligned_cols=285 Identities=11% Similarity=0.008 Sum_probs=189.2
Q ss_pred HHHHHHHHHHhCC-----CCCCceEEEecCHHHHHHHHHHhCCCCCCC----eEEEcCCCchhHHHHHHHHHHhcCCEEE
Q 037063 182 SKIRKRIMDFMNI-----SEDDYTLVFTANQSSAFKLLAESYPFYSNP----RLLTVYDHENEAAALMIESSKKRGARVS 252 (588)
Q Consensus 182 ~~~r~~ia~~lga-----~~~e~~vvft~g~T~al~lv~~s~~~~~gd----~ll~~~e~~s~~~~~~~~~a~~~G~~v~ 252 (588)
.++|+.|+++++. +++ .+|++|+|+++++.+++.++ +++|| +|++....+... ...++..|++++
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~-~~i~~t~G~~~al~~~~~~l-~~~Gd~~~~~Vlv~~P~y~~~----~~~~~~~g~~~~ 144 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATED-RYIVVGTGSTQLCQAAVHAL-SSLARSQPVSVVAAAPFYSTY----VEETTYVRSGMY 144 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSS-SEEEEEEHHHHHHHHHHHHH-HHTSSSSSEEEEECSSCCTHH----HHHHHTTCBTTE
T ss_pred HHHHHHHHHHHHhcCCCCCCC-CeEEEeCChHHHHHHHHHHh-cCCCCCCcceEEEcCCCchhH----HHHHHHcCCeEE
Confidence 4788888888872 332 35999999999999999999 78999 877655544322 345677899998
Q ss_pred EEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCC
Q 037063 253 SAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLG 331 (588)
Q Consensus 253 ~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~ 331 (588)
.++++. + .++ . +++++|++++++||||..++ +| +.++.++++||+|.++..+ ....+.
T Consensus 145 ~~~~d~-~------~l~---~--------~~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~-~~~~l~ 203 (391)
T 3bwn_A 145 KWEGDA-W------GFD---K--------KGPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWP-HYTPIT 203 (391)
T ss_dssp EEEEES-T------TCC---C--------CSCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCST-TTSCCC
T ss_pred EecCCH-H------HcC---C--------CCCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCC-CCCccc
Confidence 888762 2 111 2 56899999999999999997 56 5334445999999997743 122332
Q ss_pred CCCCCCcEEEeccCccCCCCCCc--eEEEEE-eCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc
Q 037063 332 LSLFKPDFLICSFYKIFGENPSG--FGCLFV-KKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS 408 (588)
Q Consensus 332 l~~~~~D~vv~S~~K~~G~~P~G--~G~L~v-~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~ 408 (588)
. ....++++.|++|.|| +.| +|++++ ++++++.+....... ..+++.+.
T Consensus 204 ~-~~~~~i~~~S~SK~~g--~~GlRiG~~~~~~~~l~~~l~~~~~~~-------------------------~~~~~~~~ 255 (391)
T 3bwn_A 204 R-RQDHDIMLFTFSKITG--HAGSRIGWALVKDKEVAKKMVEYIIVN-------------------------SIGVSKES 255 (391)
T ss_dssp C-CBCCSEEEEEHHHHHS--CGGGCEEEEEECCHHHHHHHHHHHHHH-------------------------HSSCCHHH
T ss_pred c-CCCCeEEEEechhhcC--CCccceEEEEecCHHHHHHHHHHhccc-------------------------ccCCCHHH
Confidence 2 2347899999999998 445 699998 667766554322100 01112222
Q ss_pred chhhHHHHHHHHHHHH---------HhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCC---------
Q 037063 409 GVSSKLVECKGLDHAD---------ALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMF--------- 470 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~---------~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~--------- 470 (588)
+ .++..+|+.-. +..++++.++.+..++++.+.|.++ +++++..|....
T Consensus 256 q----~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------~~~~~~~p~~~~~~f~~~~~~ 322 (391)
T 3bwn_A 256 Q----VRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKES---------DAFTLPKYPEAFCNYFGKSLE 322 (391)
T ss_dssp H----HHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTC---------SSEECCCCCCEEETTTTEEEC
T ss_pred H----HHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhC---------CCcccccCCccccccccccCC
Confidence 2 23345554321 1126778888899999999999884 456665543210
Q ss_pred CcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCC
Q 037063 471 DRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLT 550 (588)
Q Consensus 471 ~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~ 550 (588)
..|..+.+.+.+ .+.+.++|.++||.+++|..|. .+.++||+|++ +
T Consensus 323 ~~g~~~~~~~~~-------~~~~~~~l~~~gV~v~pg~~fg-------------------------~~~~~iRis~~--~ 368 (391)
T 3bwn_A 323 SYPAFAWLGTKE-------ETDLVSELRRHKVMSRAGERCG-------------------------SDKKHVRVSML--S 368 (391)
T ss_dssp CCCSEEEEEESS-------SCCHHHHHHHTTEECEEGGGGT-------------------------CCTTEEEEESC--S
T ss_pred CcceEEEecCCc-------HHHHHHHHHHCCEEEccCCCCC-------------------------CCCCEEEEEec--C
Confidence 122344555543 1346788889999999997652 11238999998 4
Q ss_pred CHHHHHHHHHHHHHhhhh
Q 037063 551 NFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 551 t~eDv~~li~~l~~~l~~ 568 (588)
+.|+++++++.|++++++
T Consensus 369 ~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 369 REDVFNVFLERLANMKLI 386 (391)
T ss_dssp CHHHHHHHHHHHHSCC--
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 899999999999987654
No 189
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.83 E-value=2.7e-20 Score=201.53 Aligned_cols=318 Identities=11% Similarity=-0.000 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCC-----C----CeEEEcCCCchhHHHHHHHHHHhcCCE
Q 037063 180 LESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYS-----N----PRLLTVYDHENEAAALMIESSKKRGAR 250 (588)
Q Consensus 180 ~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~-----g----d~ll~~~e~~s~~~~~~~~~a~~~G~~ 250 (588)
...++|++++++++.+ .++||+|+|+|+.+++.++ .++ | |+|++...|..+.. ......|+.
T Consensus 75 ~~~~l~~~la~~~~~~----~v~~t~~gt~A~~~al~~~-~~~~~~~~G~~~~d~Ii~~~~h~~t~~----~~~~~~~~~ 145 (467)
T 2oqx_A 75 SYYALAESVKNIFGYQ----YTIPTHQGRGAEQIYIPVL-IKKREQEKGLDRSKMVAFSNYFFDTTQ----GHSQINGCT 145 (467)
T ss_dssp HHHHHHHHHHHHHCCS----EEEEEC--CCSHHHHHHHH-HHHHHHHHCCCTTTCEEEESSCCHHHH----HHHHHTTCE
T ss_pred hhHHHHHHHHHHhCcC----cEEEcCCcHHHHHHHHHHH-hccccccCCCCccceEEecccccccch----hhhhccCcc
Confidence 3468899999999872 4999999999999999887 677 8 88776655543221 122345666
Q ss_pred EEEEec----cC-----CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCC-CccCCH---HHH-HHHHHcCcEEE
Q 037063 251 VSSAEF----AW-----PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVT-GARYSY---MWM-SVAAEKGWHVL 316 (588)
Q Consensus 251 v~~v~~----~~-----~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~t-G~~~pl---~~I-~~a~~~g~~vv 316 (588)
+..... +. .++.+|+++|+++|++. ..+++++|++.+++|++ |..+|. ++| ++|+++|+++|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~----~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li 221 (467)
T 2oqx_A 146 VRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEV----GPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVV 221 (467)
T ss_dssp EEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHH----CGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEE
T ss_pred eeeccccccccCCCCCCccCCcCHHHHHHHHHhc----CCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 654321 10 23568999999999721 01368999999999998 888775 567 89999999999
Q ss_pred EeCCCcC-----------C---CCCCCCCCC-CCCCcEEEeccCccCCCCCCceEEEEEeCc-chhc---ccCCC-CCCC
Q 037063 317 LDATALG-----------S---KDMDTLGLS-LFKPDFLICSFYKIFGENPSGFGCLFVKKS-SASV---LSGST-SSVS 376 (588)
Q Consensus 317 vDaa~~~-----------~---~d~~~l~l~-~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~-~~~~---l~~~~-~g~~ 376 (588)
+|+++.. . .+...+... ...+|++++|+||.+|. |.| |+++.+++ +++. +++.. .++
T Consensus 222 ~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~-~~G-g~~~~~~~~~~~~~~~~~~~~~~~~- 298 (467)
T 2oqx_A 222 MDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMV-PMG-GLLCMKDDSFFDVYTECRTLCVVQE- 298 (467)
T ss_dssp EECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCC-SSC-EEEEECSGGGHHHHHHHHHHHHHTT-
T ss_pred EEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCC-CCc-eEEEecChhHHHHHHHHHHhhhccC-
Confidence 9988765 1 111111000 01278899999999985 655 77777777 4432 32221 110
Q ss_pred ceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCC
Q 037063 377 TIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSET 456 (588)
Q Consensus 377 g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~ 456 (588)
+. . ..|+.+..++ +++..+++. .+. +...++...+++++.+.|.++
T Consensus 299 ~~--------------------~-~~~~~~~~~~---~al~~~l~~--~~~-~~~~~~~~~~~~~l~~~L~~~------- 344 (467)
T 2oqx_A 299 GF--------------------P-TYGGLEGGAM---ERLAVGLYD--GMN-LDWLAYRIAQVQYLVDGLEEI------- 344 (467)
T ss_dssp SS--------------------C-CCCCCCHHHH---HHHHHHHHH--TTC-HHHHHHHHHHHHHHHHHHHHT-------
T ss_pred Cc--------------------c-cccchhhhHH---HHHHHhhHh--hhh-HHHHHHHHHHHHHHHHHHHHC-------
Confidence 10 0 1222221111 222222221 111 123344567788888888874
Q ss_pred CCCeEEEeCCCCCCCcccEEEEEeec----CCCCCcCHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcC
Q 037063 457 GIPLVRIYGPKVMFDRGPSLAFNVFD----WNGTRIDPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSG 531 (588)
Q Consensus 457 g~~~v~i~~p~~~~~rg~iv~f~~~~----~~g~~i~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~ 531 (588)
| +++. | ..+.++.+.+.+ .+...++...+.+.| .++||.+.+|..|..+....+ +
T Consensus 345 ~---~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~----------g-- 404 (467)
T 2oqx_A 345 G---VVCQ-Q----AGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKT----------G-- 404 (467)
T ss_dssp T---CCEE-E----ECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTT----------C--
T ss_pred C---Ceee-c----CCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccc----------c--
Confidence 2 2333 3 235566666632 111111123345555 889999987533311100000 0
Q ss_pred CCCCcCCccEEEEecCCC-CCHHHHHHHHHHHHHhhhh
Q 037063 532 TNETRSGVSVVTAALGCL-TNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 532 ~~~~~~g~~~vRvSlg~~-~t~eDv~~li~~l~~~l~~ 568 (588)
.....+...||++++.. ++.+||+++++.|+++++.
T Consensus 405 -~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~ 441 (467)
T 2oqx_A 405 -KQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_dssp -SBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHS
T ss_pred -ccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhh
Confidence 00001224999999998 9999999999999998865
No 190
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.83 E-value=1.8e-19 Score=192.61 Aligned_cols=336 Identities=12% Similarity=0.065 Sum_probs=210.4
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
..-+|+|..+.++.++.+.+++.+.+... ..+ . |+. ..-..++|+.++
T Consensus 55 ~~G~y~d~~~~~~~~~~v~~a~~~~~~~~---~~~----------------~-----------Y~~--~~g~~~lr~~ia 102 (420)
T 4f4e_A 55 GVGVYTNEDGKIPLLRAVRDAEKARVEAG---LPR----------------G-----------YLP--IDGIAAYDASVQ 102 (420)
T ss_dssp CCCSCCCTTSCCCCCHHHHHHHHHHHHTC---CCC----------------C-----------CCC--TTCCHHHHHHHH
T ss_pred eeeeeECCCCCccCcHHHHHHHHHHhccC---CCC----------------C-----------CCC--CCCcHHHHHHHH
Confidence 55679999999999899999886655320 000 0 000 001246778888
Q ss_pred HHhCC------CCCCceEEEecCHHHHHHHHHH--hCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEec-cCCC
Q 037063 190 DFMNI------SEDDYTLVFTANQSSAFKLLAE--SYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEF-AWPN 260 (588)
Q Consensus 190 ~~lga------~~~e~~vvft~g~T~al~lv~~--s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~-~~~~ 260 (588)
++++. +++..+|++|+|+|+|+.+++. ++ +++||+|++....+... ...++..|++++.++. +..+
T Consensus 103 ~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~-~~~gd~Vlv~~p~~~~~----~~~~~~~g~~~~~v~~~~~~~ 177 (420)
T 4f4e_A 103 KLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRT-LNPKAKVAISDPSWENH----RALFDMAGFEVVAYPYYDAKT 177 (420)
T ss_dssp HHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHH-HCTTCCEEEEESCCHHH----HHHHHHTTCCEEEEECEETTT
T ss_pred HHhcCCCccccccCceEEEECCccHHHHHHHHHHHHH-hCCCCEEEEeCCCcHhH----HHHHHHcCCeEEEeeeecccc
Confidence 77743 3331159999999999999943 55 68999977554443322 3455678999999998 3246
Q ss_pred CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcCC-CCC----CCC-
Q 037063 261 LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALGS-KDM----DTL- 330 (588)
Q Consensus 261 ~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~~-~d~----~~l- 330 (588)
+.+|.++|++.+++ ..++++++++++++|+||..++.++ | ++|+++|+++|+|.+...- .+. ..+
T Consensus 178 ~~~d~~~l~~~l~~-----~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~ 252 (420)
T 4f4e_A 178 NGVNFDGMLAALNG-----YEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVR 252 (420)
T ss_dssp TEECHHHHHHHHTT-----CCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHH
T ss_pred CccCHHHHHHHHHh-----CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHH
Confidence 78999999999972 1257899999999999999999775 5 7799999999999984321 110 000
Q ss_pred CC-CCCCCcEEEeccCccCCCCCCceEEEEEe---CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 331 GL-SLFKPDFLICSFYKIFGENPSGFGCLFVK---KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 331 ~l-~~~~~D~vv~S~~K~~G~~P~G~G~L~v~---~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
.+ .....++++.|++|.||.+..++|++++. ++.++.+...... . . +. ...+++
T Consensus 253 ~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~----------------~-~----~~-~~~~~~ 310 (420)
T 4f4e_A 253 LFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKR----------------V-I----RT-NYSNPP 310 (420)
T ss_dssp HHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHH----------------H-H----HT-TTSSCC
T ss_pred HHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHH----------------H-H----hc-ccCCCC
Confidence 00 12236788999999999322338998752 2332221100000 0 0 00 001111
Q ss_pred ccchhhHHHHHHHHHHH------HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEe
Q 037063 407 ISGVSSKLVECKGLDHA------DALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNV 480 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l------~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~ 480 (588)
.... .++..++... ++ .++++.++.+.+++++.+.|.++.- .++++++.| .++++.|
T Consensus 311 ~~~~---~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~------~~~~~~~~~-----~~g~~~~-- 373 (420)
T 4f4e_A 311 THGG---AIVAAVLASPELRASWVQ-ELGEMRDRIRAMRNGLVERLKAAGI------ERDFSFINA-----QRGMFSY-- 373 (420)
T ss_dssp SHHH---HHHHHHHHCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTC------SSCCTHHHH-----SCSSEEE--
T ss_pred HHHH---HHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCC------CCCceeECC-----CccEEEE--
Confidence 1111 2222233221 11 2577888889999999999988510 013333332 2344433
Q ss_pred ecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHH
Q 037063 481 FDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWA 560 (588)
Q Consensus 481 ~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~ 560 (588)
.+ ++.+.+.+++.++||.+++| .|+|++.. +.+||+++++
T Consensus 374 ~~-----~~~~~~~~~l~~~gI~v~~~----------------------------------~Ris~~~~-~~~~i~~~~~ 413 (420)
T 4f4e_A 374 SG-----LTSAQVDRLREEFGIYAVST----------------------------------GRICVAAL-NTRNLDVVAN 413 (420)
T ss_dssp CC-----CCHHHHHHHHHHHCEECCTT----------------------------------SEEEGGGC-CTTTHHHHHH
T ss_pred eC-----CCHHHHHHHHHhCCEEecCC----------------------------------CeEEEecC-CHHHHHHHHH
Confidence 22 45677888999999988643 28998754 5577999999
Q ss_pred HHHHhh
Q 037063 561 FVSRFL 566 (588)
Q Consensus 561 ~l~~~l 566 (588)
.|++++
T Consensus 414 ~l~~~l 419 (420)
T 4f4e_A 414 AIAAVL 419 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999876
No 191
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.83 E-value=3.8e-19 Score=196.28 Aligned_cols=309 Identities=10% Similarity=0.059 Sum_probs=187.7
Q ss_pred ceEEEecCHHHHHHHHHHh-----CCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccC---CCCccCHHHHHH
Q 037063 199 YTLVFTANQSSAFKLLAES-----YPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAW---PNLRIHSGKLMK 270 (588)
Q Consensus 199 ~~vvft~g~T~al~lv~~s-----~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~---~~~~i~~e~l~~ 270 (588)
.+|++|+|+|+|+.+++.+ + +++||+|++....+... ...++..|++++.++++. .++.+++++|++
T Consensus 165 ~~i~~t~G~t~al~~~~~~l~~~~l-~~~gd~Viv~~p~~~~~----~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~ 239 (533)
T 3f6t_A 165 TDLFPTEGGTAAIVYAFHSLAENHL-LKKGDKIAINEPIFTPY----LRIPELKDYELVEVDLHSYEKNDWEIEPNEIEK 239 (533)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHTTS-SCTTCEEEEESSCCHHH----HTSGGGGGSEEEEECCCEETTTTSEECHHHHHH
T ss_pred ceEEEECCHHHHHHHHHHHhhhhhc-cCCcCEEEEcCCCcHHH----HHHHHHcCCeEEEEEecCCcccCCCCCHHHHHH
Confidence 4699999999999999998 6 89999977654444312 344566799999998852 457789999999
Q ss_pred HHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHH-HcCcEEEEeCCCcCC-CCCCCCCCCCCCCcEEEecc
Q 037063 271 KIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAA-EKGWHVLLDATALGS-KDMDTLGLSLFKPDFLICSF 344 (588)
Q Consensus 271 ~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~-~~g~~vvvDaa~~~~-~d~~~l~l~~~~~D~vv~S~ 344 (588)
+++ +++++|++.+++|+||..+|.++ | ++|+ ++|+++|+|.++..- .+..++.-.....++++.|+
T Consensus 240 ~l~--------~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~ 311 (533)
T 3f6t_A 240 LKD--------PSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSY 311 (533)
T ss_dssp HSC--------TTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEES
T ss_pred HhC--------CCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecC
Confidence 987 78999999999999999999985 5 6777 589999999996531 11111100011245999999
Q ss_pred CccCCCCCCc--eEEEEEeCc-----chhcccCCCCCC----CceEeeecCCCccccccc-----ccccccccCCCCCcc
Q 037063 345 YKIFGENPSG--FGCLFVKKS-----SASVLSGSTSSV----STIMGIEPSFSEIIELET-----LDESSQSKFPESSIS 408 (588)
Q Consensus 345 ~K~~G~~P~G--~G~L~v~~~-----~~~~l~~~~~g~----~g~v~~~~~~~~~~~~~~-----~~~~~f~e~GT~~~~ 408 (588)
+|.+| +.| +|+++++++ +++.+.+..... .+.....+.. ...++. +....+ ..++.+..
T Consensus 312 SK~~g--~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~--~~~i~rl~~~~~~~~~~-~~~~~~~~ 386 (533)
T 3f6t_A 312 SKLFG--CTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDK--MKFIDRLCADSRSIGLY-HTAGLSTP 386 (533)
T ss_dssp HHHHT--CGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGG--CCHHHHHHHHHTTTTTG-GGCSCCHH
T ss_pred cccCC--CcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcch--hhhHHHHHHHHHHHHHh-cccCCChH
Confidence 99999 456 999999987 544442110000 0000000000 000000 000011 11222222
Q ss_pred chhhHHHHHHHHHHHH------Hh--CHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEE-E
Q 037063 409 GVSSKLVECKGLDHAD------AL--GLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAF-N 479 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~------~~--G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f-~ 479 (588)
.. .++...++..+. .. -++++.++++..++.+.+.|. + + +.+.. ..+++..+ .
T Consensus 387 ~q--~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~-------~---~~~~~-----~~~g~~~~~~ 448 (533)
T 3f6t_A 387 QQ--IMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-A-------P---KDETD-----TNTHYYSLID 448 (533)
T ss_dssp HH--HHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-C-------C---CCCST-----TBCCSEEEEE
T ss_pred HH--HHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-C-------C---ccccC-----CCceEEEEEe
Confidence 21 111111333332 01 156677777788888888885 4 1 22222 23443333 3
Q ss_pred eecC----CCC--------CcC-HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec
Q 037063 480 VFDW----NGT--------RID-PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL 546 (588)
Q Consensus 480 ~~~~----~g~--------~i~-~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl 546 (588)
+..+ .|. ..+ .+.+.++++++||.+.+|..|.. +.+.||+|+
T Consensus 449 l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~-------------------------~~~~iRls~ 503 (533)
T 3f6t_A 449 IYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGA-------------------------KPGELRVSQ 503 (533)
T ss_dssp HHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECS-------------------------STTEEEEES
T ss_pred hHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCC-------------------------CCCEEEEEE
Confidence 3210 000 012 24557788899999999977731 123999999
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhh
Q 037063 547 GCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 547 g~~~t~eDv~~li~~l~~~l~~~ 569 (588)
+. .+.+||+++++.|++++++.
T Consensus 504 a~-~~~e~i~~~i~~L~~~l~~~ 525 (533)
T 3f6t_A 504 AN-LPTEDYALIGKQVLELLKEY 525 (533)
T ss_dssp SS-SCHHHHHHHHHHHHHHHHHH
T ss_pred ee-CCHHHHHHHHHHHHHHHHHH
Confidence 65 46899999999999988763
No 192
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.83 E-value=7e-20 Score=193.63 Aligned_cols=331 Identities=14% Similarity=0.132 Sum_probs=208.5
Q ss_pred CCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHHHHHHH
Q 037063 110 NNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKIRKRIM 189 (588)
Q Consensus 110 ~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~r~~ia 189 (588)
..-.|+|..+..+.++.+.+++.+.+... ..+ .|+. ..-..++|+.|+
T Consensus 32 ~~g~~~~~~~~~~~~~~v~~a~~~~~~~~---~~~---------------------------~y~~--~~g~~~lr~~la 79 (396)
T 2q7w_A 32 GIGVYKDETGKTPVLTSVKKAEQYLLENE---TTK---------------------------NYLG--IDGIPEFGRCTQ 79 (396)
T ss_dssp SCCSCCCTTSCCCCCHHHHHHHHHHHHHC---CCC---------------------------CCCC--TTCCHHHHHHHH
T ss_pred ccccccCCCCCccCcHHHHHHHHhhcCcc---ccc---------------------------CCCC--CCCCHHHHHHHH
Confidence 45568888877788888888875543211 000 0000 011247889999
Q ss_pred HHhC------CCCCCceEEE--ecCHHHHHHHHHHhCC-CCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEEeccC-
Q 037063 190 DFMN------ISEDDYTLVF--TANQSSAFKLLAESYP-FYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSAEFAW- 258 (588)
Q Consensus 190 ~~lg------a~~~e~~vvf--t~g~T~al~lv~~s~~-~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v~~~~- 258 (588)
++++ +++++ |+| |+|+|+|+.+++..+. +.+||+|++. ..|+. . ...++..|++++.++.+.
T Consensus 80 ~~~~~~~~~~~~~~~--v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~-~----~~~~~~~g~~~~~~~~~~~ 152 (396)
T 2q7w_A 80 ELLFGKGSALINDKR--ARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPN-H----KSVFNSAGLEVREYAYYDA 152 (396)
T ss_dssp HHHHCTTCHHHHTTC--EEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTH-H----HHHHHHTTCEEEEEECEET
T ss_pred HHHhcCCCCcccccc--EEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchh-H----HHHHHHcCCceEEEecccC
Confidence 9882 23444 888 9999999999987652 4689997654 44443 2 345567899999999842
Q ss_pred CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcCC-CC----CCC
Q 037063 259 PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALGS-KD----MDT 329 (588)
Q Consensus 259 ~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~~-~d----~~~ 329 (588)
.++.+|+++|++++++ ..++++++++++++|+||..+|.++ | ++|+++|+++|+|+++... .+ ..+
T Consensus 153 ~~~~~d~~~l~~~l~~-----~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 227 (396)
T 2q7w_A 153 ENHTLDFDALINSLNE-----AQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEG 227 (396)
T ss_dssp TTTEECHHHHHHHHTT-----CCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHH
T ss_pred CCCCcCHHHHHHHHHh-----CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHH
Confidence 3567899999999972 1135789999999999999998765 6 7899999999999996542 10 001
Q ss_pred CC-CCC-CCCcEEEeccCccCCCCCCc--eEEEEE---eCcchhcccCCCCCCCceEeeecCCCcccccccccccccccC
Q 037063 330 LG-LSL-FKPDFLICSFYKIFGENPSG--FGCLFV---KKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKF 402 (588)
Q Consensus 330 l~-l~~-~~~D~vv~S~~K~~G~~P~G--~G~L~v---~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~ 402 (588)
+. +.. ...++++.|++|.+| +.| +|++++ +++.++.+...... . . +. ..
T Consensus 228 ~~~~~~~~~~~i~~~s~sK~~~--~~G~riG~~~~~~~~~~~~~~~~~~~~~---~--------------~----~~-~~ 283 (396)
T 2q7w_A 228 LRAFAAMHKELIVASSYSXNFG--LYNERVGACTLVAADSETVDRAFSQMKA---A--------------I----RA-NY 283 (396)
T ss_dssp HHHHHHHCSCEEEEEECTTTTT--CGGGCCEEEEEECSSHHHHHHHHHHHHH---H--------------H----HT-TT
T ss_pred HHHHHhcCCcEEEEEecccccc--ccccccceEEEEcCCHHHHHHHHHHHHH---H--------------H----hh-cc
Confidence 11 111 124688999999999 456 799997 44322222110000 0 0 00 11
Q ss_pred CCCCccchhhHHHHHHHHHHH------HHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC-eEEEeCCCCCCCcccE
Q 037063 403 PESSISGVSSKLVECKGLDHA------DALGLILISNRARYLINWLANALMNLHHPHSETGIP-LVRIYGPKVMFDRGPS 475 (588)
Q Consensus 403 GT~~~~~~~~~~al~~aL~~l------~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~-~v~i~~p~~~~~rg~i 475 (588)
++++.... +++..+|+.. .+ .++++.++++.+++++.+.|.++ |.+ .++++.| .+++
T Consensus 284 ~~~~~~~~---~a~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-------~~~~~~~~~~~-----~~~~ 347 (396)
T 2q7w_A 284 SNPPAHGA---SVVATILSNDALRAIWEQ-ELTDMRQRIQRMRQLFVNTLQEK-------GANRDFSFIIK-----QNGM 347 (396)
T ss_dssp SSCCHHHH---HHHHHHHTSHHHHHHHHH-HHHHC-CHHHHHHHHHHHHHHHT-------TCCSCCTHHHH-----CCSS
T ss_pred CCCCcHHH---HHHHHHhcChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhc-------CCCCCcceecC-----CCce
Confidence 12222221 2333444322 11 35677888888999999999885 111 2333322 3444
Q ss_pred EEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHH
Q 037063 476 LAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDT 555 (588)
Q Consensus 476 v~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv 555 (588)
+.+. + ++.+.+.+++.++||.+++ .+|+|++.. +.||+
T Consensus 348 ~~~~--~-----~~~~~~~~~l~~~gv~v~~----------------------------------~~Ris~~~~-~~e~i 385 (396)
T 2q7w_A 348 FSFS--G-----LTKEQVLRLREEFGVYAVA----------------------------------SGRVNVAGM-TPDNM 385 (396)
T ss_dssp EEEC--C-----CCHHHHHHHHHHHCEECCT----------------------------------TCEEEGGGC-CTTTH
T ss_pred EEEe--c-----CCHHHHHHHHHhcCeeecC----------------------------------CceEEEeec-CHHHH
Confidence 4332 2 3356678888889998763 269999854 88999
Q ss_pred HHHHHHHHHhh
Q 037063 556 YRLWAFVSRFL 566 (588)
Q Consensus 556 ~~li~~l~~~l 566 (588)
+++++.|++++
T Consensus 386 ~~~~~~l~~~l 396 (396)
T 2q7w_A 386 APLCEAIVAVL 396 (396)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
Confidence 99999998754
No 193
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.82 E-value=7.5e-20 Score=193.38 Aligned_cols=294 Identities=14% Similarity=0.128 Sum_probs=188.5
Q ss_pred HHHHHHHHHHh-CC--CCCCceEEE--ecCHHHHHHHHHHhCC-CCCCCeEEEc-CCCchhHHHHHHHHHHhcCCEEEEE
Q 037063 182 SKIRKRIMDFM-NI--SEDDYTLVF--TANQSSAFKLLAESYP-FYSNPRLLTV-YDHENEAAALMIESSKKRGARVSSA 254 (588)
Q Consensus 182 ~~~r~~ia~~l-ga--~~~e~~vvf--t~g~T~al~lv~~s~~-~~~gd~ll~~-~e~~s~~~~~~~~~a~~~G~~v~~v 254 (588)
.++|+.|++++ +. +++ .|+| |+|+|+|+.+++..+. +.+||+|++. ..|+. . ...++..|++++.+
T Consensus 72 ~~lr~~la~~~~~~~~~~~--~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~-~----~~~~~~~g~~~~~~ 144 (394)
T 2ay1_A 72 PEFQKAMGELILGDGLKSE--TTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPN-H----VSIMNFMGLPVQTY 144 (394)
T ss_dssp HHHHHHHHHHHHGGGCCGG--GEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHH-H----HHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHhCCCCCcc--cEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChh-H----HHHHHHcCCceEEE
Confidence 47888999887 55 444 4999 9999999999987752 3489996654 44543 2 34456679999999
Q ss_pred eccC-CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcCC-CC--
Q 037063 255 EFAW-PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALGS-KD-- 326 (588)
Q Consensus 255 ~~~~-~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~~-~d-- 326 (588)
+.+. .++.+|.++|+++++. . .++++++++++++|+||..+|.++ | ++|+++|+++|+|+++... .+
T Consensus 145 ~~~~~~~~~~d~~~l~~~l~~----~-~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 219 (394)
T 2ay1_A 145 RYFDAETRGVDFEGMKADLAA----A-KKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLE 219 (394)
T ss_dssp ECEETTTTEECHHHHHHHHHT----C-CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHH
T ss_pred ecccccCCccCHHHHHHHHHh----C-CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcc
Confidence 9852 3467899999999972 1 134788999999999999998764 5 7899999999999997642 10
Q ss_pred --CCCCC-CCCCCC-cEEEeccCccCCCCCCceEEEEE---eCcchhcccCCCCCCCceEeeecCCCccccccccccccc
Q 037063 327 --MDTLG-LSLFKP-DFLICSFYKIFGENPSGFGCLFV---KKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQ 399 (588)
Q Consensus 327 --~~~l~-l~~~~~-D~vv~S~~K~~G~~P~G~G~L~v---~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f 399 (588)
..++. +..... ++++.|++|.+|.+..++|++++ ++++++.+...... . . +.
T Consensus 220 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~---~--------------~----~~ 278 (394)
T 2ay1_A 220 EDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAF---L--------------N----RQ 278 (394)
T ss_dssp HHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHH---H--------------H----HT
T ss_pred cchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHH---H--------------H----hh
Confidence 00111 111123 46788999999832223699998 45443332111000 0 0 00
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHH-----HhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 400 SKFPESSISGVSSKLVECKGLDHAD-----ALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 400 ~e~GT~~~~~~~~~~al~~aL~~l~-----~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
..++++.... +++..+|+... ...++++.++++.+++++.+.|.++..+ .+++++.| .++
T Consensus 279 -~~~~~~~~~~---~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~------~~~~~~~~-----~~g 343 (394)
T 2ay1_A 279 -TYSFPPFHGA---KIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGS------DRFGFVAE-----HRG 343 (394)
T ss_dssp -TTSSCCCHHH---HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS------STTTHHHH-----CCS
T ss_pred -hcCCCChHHH---HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------CCeeEEcC-----Cce
Confidence 1111222221 33344554320 1136788888899999999999875100 01333322 234
Q ss_pred EEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHH
Q 037063 475 SLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFED 554 (588)
Q Consensus 475 iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eD 554 (588)
++.+. + ++.+.+.+++.++||.++. .+|+|++ .++.+|
T Consensus 344 ~~~~~--~-----~~~~~~~~~l~~~gi~v~~----------------------------------~~Ris~~-~~~~~~ 381 (394)
T 2ay1_A 344 MFSRL--G-----ATPEQVKRIKEEFGIYMVG----------------------------------DSRINIA-GLNDNT 381 (394)
T ss_dssp SEEEC--C-----CCHHHHHHHHHHHCEECCT----------------------------------TCEEEGG-GCCTTT
T ss_pred EEEee--C-----CCHHHHHHHHHhCCEEecC----------------------------------CCeEEee-cCCHhh
Confidence 43331 2 3356678888889998763 2699998 478999
Q ss_pred HHHHHHHHHHh
Q 037063 555 TYRLWAFVSRF 565 (588)
Q Consensus 555 v~~li~~l~~~ 565 (588)
++++++.|+++
T Consensus 382 i~~~~~~l~~~ 392 (394)
T 2ay1_A 382 IPILARAIIEV 392 (394)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 99999998875
No 194
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.82 E-value=1.4e-18 Score=184.83 Aligned_cols=168 Identities=10% Similarity=0.046 Sum_probs=125.9
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEE-cCCCchhHHHHHHHH-HHhcCCEEEEE
Q 037063 177 ESELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLT-VYDHENEAAALMIES-SKKRGARVSSA 254 (588)
Q Consensus 177 ~~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~-~~e~~s~~~~~~~~~-a~~~G~~v~~v 254 (588)
.....++++++++++.|.+ .+++++|+++|+.++ ..+ +++||+|++ ...|++ .+..+... ++..|++++.+
T Consensus 65 ~~p~~~~l~~~la~l~g~~----~~~~~~sG~~Ai~~~-~~l-~~~gd~Vi~~~~~y~~-~~~~~~~~~~~~~g~~~~~v 137 (400)
T 3nmy_A 65 HNPTRFAYERCVAALEGGT----RAFAFASGMAATSTV-MEL-LDAGSHVVAMDDLYGG-TFRLFERVRRRTAGLDFSFV 137 (400)
T ss_dssp CCHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHH-HTT-SCTTCEEEEESSCCHH-HHHHHHHTHHHHHCCEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCC----CEEEecCHHHHHHHH-HHH-cCCCCEEEEeCCCchH-HHHHHHHhhHhhcCeEEEEE
Confidence 3567789999999999984 266777779999984 566 789999765 445554 34443444 56779999999
Q ss_pred eccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCCCCCCCCC
Q 037063 255 EFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKDMDTLGLS 333 (588)
Q Consensus 255 ~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d~~~l~l~ 333 (588)
+.+ |+++|+++|+ +++++|++++++|++|.+.|+++| ++|+++|+++|+|+++..+....+++
T Consensus 138 ~~~------d~~~l~~~i~--------~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~-- 201 (400)
T 3nmy_A 138 DLT------DPAAFKAAIR--------ADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLS-- 201 (400)
T ss_dssp CTT------SHHHHHHHCC--------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGGG--
T ss_pred CCC------CHHHHHHHhc--------cCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChhh--
Confidence 874 7899999987 789999999999999999999999 99999999999999987552122332
Q ss_pred CCCCcEEEeccCccCCCCCCceEE--EEEeC-cchhcc
Q 037063 334 LFKPDFLICSFYKIFGENPSGFGC--LFVKK-SSASVL 368 (588)
Q Consensus 334 ~~~~D~vv~S~~K~~G~~P~G~G~--L~v~~-~~~~~l 368 (588)
+++|+++.|++|++|.+...+|. +++++ ++++.+
T Consensus 202 -~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l 238 (400)
T 3nmy_A 202 -LGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQM 238 (400)
T ss_dssp -GTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHH
T ss_pred -cCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHH
Confidence 23999999999988731123444 44433 444444
No 195
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.80 E-value=8.4e-19 Score=186.81 Aligned_cols=173 Identities=13% Similarity=0.029 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHhCCCCCCceEEE--ecCHHHHHHHHHHhCCCCCCCeEEEcC--CCchhHHHHHH------HHHHhcCCE
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVF--TANQSSAFKLLAESYPFYSNPRLLTVY--DHENEAAALMI------ESSKKRGAR 250 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvf--t~g~T~al~lv~~s~~~~~gd~ll~~~--e~~s~~~~~~~------~~a~~~G~~ 250 (588)
.+++++.+|+++|++ ..+++ ++|+|+|+.+++.++ +++||+|++.. .|.. ....+. ..++..|++
T Consensus 61 ~~~Le~~lA~l~g~e---~alv~p~~~sGt~Ai~~al~al-l~~GD~Vl~~~~~~y~~-~~~~~~~~g~~~~~l~~~G~~ 135 (409)
T 3jzl_A 61 RDTLERVYATVFKTE---AALVRPQIISGTHAISTVLFGI-LRPDDELLYITGQPYDT-LEEIVGIRKQGQGSLKDFHIG 135 (409)
T ss_dssp HHHHHHHHHHHHTCS---EEEEETTSCSHHHHHHHHHHHH-CCTTCEEEECSSSCCTT-HHHHHTSSSSSSSCTGGGTCE
T ss_pred HHHHHHHHHHHhCCC---cEEEECCCccHHHHHHHHHHHh-cCCCCEEEEeCCCCcHh-HHHHHhcccchhhHHHHcCCE
Confidence 678899999999984 33665 899999999999999 89999987654 3433 222110 344677999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeC----CCCCCCccCCHHHH-HHHHH--cCcEEEEeCCCcC
Q 037063 251 VSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPL----QSKVTGARYSYMWM-SVAAE--KGWHVLLDATALG 323 (588)
Q Consensus 251 v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~----~sn~tG~~~pl~~I-~~a~~--~g~~vvvDaa~~~ 323 (588)
++.++.+ +++.+|+++|+++|+ ++|++|++.+ ++|+||.+.|+++| ++|++ +|+++++|+++..
T Consensus 136 ~~~v~~~-~~g~~d~e~l~~ai~--------~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~ 206 (409)
T 3jzl_A 136 YSSVPLL-ENGDVDFPRIAKKMT--------PKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGE 206 (409)
T ss_dssp EEECCCC-TTSCCCHHHHHHHCC--------TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCT
T ss_pred EEEeCCC-CCCCcCHHHHHHhcc--------CCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccc
Confidence 9999997 678899999999998 7899999999 99999999999999 99999 9999999999776
Q ss_pred CC-CCCCCCCCCCCCcEEEeccCccCCCCC-CceEEEEEeCcchhcccC
Q 037063 324 SK-DMDTLGLSLFKPDFLICSFYKIFGENP-SGFGCLFVKKSSASVLSG 370 (588)
Q Consensus 324 ~~-d~~~l~l~~~~~D~vv~S~~K~~G~~P-~G~G~L~v~~~~~~~l~~ 370 (588)
+. ...++. .++|+++.|+||.+|.+. ...|+++.++++++.+..
T Consensus 207 ~~~~~~p~~---~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~ 252 (409)
T 3jzl_A 207 FVEYQEPPE---VGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGY 252 (409)
T ss_dssp TTSSCCSGG---GTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHH
T ss_pred ccccCCccc---cCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHH
Confidence 63 122222 348999999999887210 124999999888877654
No 196
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.80 E-value=7.1e-18 Score=182.12 Aligned_cols=306 Identities=12% Similarity=-0.023 Sum_probs=193.1
Q ss_pred hHHHHHHHHHHHHHhC-CCCCCceEEEecCHHHHHHHHHHhCC--CC-----------CCCeEE-EcCCCchhHHHHHHH
Q 037063 178 SELESKIRKRIMDFMN-ISEDDYTLVFTANQSSAFKLLAESYP--FY-----------SNPRLL-TVYDHENEAAALMIE 242 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lg-a~~~e~~vvft~g~T~al~lv~~s~~--~~-----------~gd~ll-~~~e~~s~~~~~~~~ 242 (588)
.+...+++++++++++ .+++ .|+||+|+|+|+.+++.... .+ +|++|+ ....||.....++..
T Consensus 100 ~~~~~~la~~la~~~~~~~~~--~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~ 177 (449)
T 2cjg_A 100 SVAMARFVETFARVLGDPALP--HLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSL 177 (449)
T ss_dssp CHHHHHHHHHHHHHHCCTTCC--EEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGT
T ss_pred CHHHHHHHHHHHHhcCCCCCC--EEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhh
Confidence 3456788999999997 3343 59999999999999886431 11 277866 455566532222110
Q ss_pred H----HHhcCC-----EEEEEeccC--CCC-------ccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---
Q 037063 243 S----SKKRGA-----RVSSAEFAW--PNL-------RIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS--- 301 (588)
Q Consensus 243 ~----a~~~G~-----~v~~v~~~~--~~~-------~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p--- 301 (588)
. ..+.|. .+..+|.+. .+. .++.++|+++|++ ..+++++|++..++|++|.+.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~-----~~~~~~~vi~ep~~~~~G~~~~~~~ 252 (449)
T 2cjg_A 178 TNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFET-----RPHDIACFVAEPIQGEGGDRHFRPE 252 (449)
T ss_dssp CCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-----STTTEEEEEECSEETTTTCEECCHH
T ss_pred cCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHh-----cCCceEEEEEeCcCCCCCCccCCHH
Confidence 0 011232 566666641 110 2455668888851 1257899999999999998777
Q ss_pred -HHHH-HHHHHcCcEEEEeCCCc-CCCCCC--CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCC
Q 037063 302 -YMWM-SVAAEKGWHVLLDATAL-GSKDMD--TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVS 376 (588)
Q Consensus 302 -l~~I-~~a~~~g~~vvvDaa~~-~~~d~~--~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~ 376 (588)
+++| ++|+++|+++|+|+++. ++..-. .+......+|+++ +.|.+ | +|++++++++++.+.+.+.+.
T Consensus 253 ~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~t--~sK~l---~--iG~~~~~~~~~~~l~~~~~~~- 324 (449)
T 2cjg_A 253 FFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVA--FGKKT---Q--VCGVMAGRRVDEVADNVFAVP- 324 (449)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEE--ECGGG---S--SEEEEECGGGGGSTTCTTTST-
T ss_pred HHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEEE--ecCcc---c--EEEEEECHHHhhhhhhcccCC-
Confidence 8888 99999999999999987 331101 1111123478775 55966 3 799999998877655432110
Q ss_pred ceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCC
Q 037063 377 TIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSET 456 (588)
Q Consensus 377 g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~ 456 (588)
+. ..+|.+...+ ..++..++|+.+.+ +.+.++++.+.+++++.|.++..
T Consensus 325 ~~----------------------~~~t~~~n~~-~~~aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~----- 373 (449)
T 2cjg_A 325 SR----------------------LNSTWGGNLT-DMVRARRILEVIEA---EGLFERAVQHGKYLRARLDELAA----- 373 (449)
T ss_dssp TS----------------------SCCSSSSCHH-HHHHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred cc----------------------cccCCCCCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHh-----
Confidence 00 0112111111 12455577777655 45678888888999998887510
Q ss_pred CCCe-EEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCC
Q 037063 457 GIPL-VRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNET 535 (588)
Q Consensus 457 g~~~-v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~ 535 (588)
+.+. +..+. ..|.++.+.+.+. .....+.+.|.++||.++.+.
T Consensus 374 ~~~~~~~~~~-----~~g~~~~~~~~~~----~~~~~~~~~l~~~Gv~v~~~g--------------------------- 417 (449)
T 2cjg_A 374 DFPAVVLDPR-----GRGLMCAFSLPTT----ADRDELIRQLWQRAVIVLPAG--------------------------- 417 (449)
T ss_dssp HSTTTSEEEE-----EETTEEEEECSSH----HHHHHHHHHHHHTTEECEEET---------------------------
T ss_pred hCCCceeeEe-----eccEEEEEEECCh----HHHHHHHHHHHHCCeEEecCC---------------------------
Confidence 0122 22221 2467888776531 124456666667899987641
Q ss_pred cCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 536 RSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 536 ~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
..+||+++++.++.|||+++++.|++++++
T Consensus 418 ---~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 418 ---ADTVRFRPPLTVSTAEIDAAIAAVRSALPV 447 (449)
T ss_dssp ---TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 128999999999999999999999998754
No 197
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.80 E-value=1.7e-17 Score=178.14 Aligned_cols=345 Identities=12% Similarity=0.036 Sum_probs=212.8
Q ss_pred CCeeeecCCCCCC------CCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGHGL------FSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~gl------~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+.-|+|.++... .++.+++++.+.+... .+. ... ....+...+
T Consensus 41 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~----------------------~~~------~~~~~~~~~ 90 (439)
T 3dxv_A 41 NGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANP--AGA----------------------TIL------SASNAPAVT 90 (439)
T ss_dssp TSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSC--SCS----------------------CSS------SSEEHHHHH
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhc--cCc----------------------ccc------ccCCHHHHH
Confidence 5677999887654 6788888876665321 111 000 001467789
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCe-EEEcCCCchhHHHHHHHHHHhcCCE-----------
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPR-LLTVYDHENEAAALMIESSKKRGAR----------- 250 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~-ll~~~e~~s~~~~~~~~~a~~~G~~----------- 250 (588)
++++++++++...+ ..|+||+|+++|+.+++.... +.++++ |+....||......+ ...|..
T Consensus 91 l~~~la~~~~~~~~-~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~----~~~~~~~~~~~~~~~~~ 165 (439)
T 3dxv_A 91 LAERLLASFPGEGT-HKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSM----AFSGHSVQADAAKADGL 165 (439)
T ss_dssp HHHHHHHTTTCTTT-EEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHH----CC-------------CE
T ss_pred HHHHHHHhCCCCCC-CEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHH----hhcCCCchhhccccCCC
Confidence 99999999976542 259999999999999888631 124456 455666665333221 111211
Q ss_pred ---EEEEeccCCCCcc-----CHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEE
Q 037063 251 ---VSSAEFAWPNLRI-----HSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLL 317 (588)
Q Consensus 251 ---v~~v~~~~~~~~i-----~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvv 317 (588)
+..++.+ ..... |+++|+++|. +...+++++|++..+++++|.+.| +++| ++|+++|+++|+
T Consensus 166 ~~~~~~~~~~-~~~~~~~~~~d~~~le~~l~----~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 240 (439)
T 3dxv_A 166 ILLPYPDPYR-PYRNDPTGDAILTLLTEKLA----AVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVC 240 (439)
T ss_dssp EEECCCCSSS-CBTTBTTSHHHHHHHHHHHH----TSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred CCCcEEcCCC-cccccccHHHHHHHHHHHHH----hcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 1233332 11111 5889999984 112267899999999999999999 9999 999999999999
Q ss_pred eCCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 318 DATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 318 Daa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
|.++. ++.. ...++.....+|++ |+.|.+|. ..++|++++++++++.+.+...+
T Consensus 241 DE~~~g~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G~riG~~~~~~~~~~~~~~~~~~-------------------- 297 (439)
T 3dxv_A 241 DEVKVGLARSGRLHCFEHEGFVPDIL--VLGKGLGG-GLPLSAVIAPAEILDCASAFAMQ-------------------- 297 (439)
T ss_dssp ECTTTCTTTTSSSSGGGGTTCCCSEE--EECGGGGT-TSCCEEEEEEHHHHTSCSSSSCC--------------------
T ss_pred eccccCCCcCchhhHHHhcCCCCCEE--EEcchhcC-CcceEEEEECHHHHhhhcCCCcC--------------------
Confidence 99975 2110 11111112337876 77898873 34689999999887766543221
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
+|. ...+ ..++..++|+.+.. +.+.++++.+.+++++.|.++... .+.+.... ..|.
T Consensus 298 --------~t~-~~~~-~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~-----~~g~ 354 (439)
T 3dxv_A 298 --------TLH-GNPI-SAAAGLAVLETIDR---DDLPAMAERKGRLLRDGLSELAKR-----HPLIGDIR-----GRGL 354 (439)
T ss_dssp --------TTT-TCHH-HHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHH-----CTTEEEEE-----EETT
T ss_pred --------CCc-ccHH-HHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEE-----EEEE
Confidence 111 1111 12344456666554 445666667777777776654100 13333322 2467
Q ss_pred EEEEEeecCCC----CCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCC
Q 037063 475 SLAFNVFDWNG----TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLT 550 (588)
Q Consensus 475 iv~f~~~~~~g----~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~ 550 (588)
++.+.+.+... .......+.+.|.++||.++.|.. ....||+++++..
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----------------------------~~~~iRi~~~~~~ 406 (439)
T 3dxv_A 355 ACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGM----------------------------NGNVLEFTPPLTI 406 (439)
T ss_dssp EEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEEST----------------------------TSCEEEECCCTTC
T ss_pred EEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCC----------------------------CCCEEEEECCCCC
Confidence 77777632110 001234566666667999887621 1128999999999
Q ss_pred CHHHHHHHHHHHHHhhhh
Q 037063 551 NFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 551 t~eDv~~li~~l~~~l~~ 568 (588)
+.||++++++.|++++++
T Consensus 407 t~e~i~~~l~~l~~~l~~ 424 (439)
T 3dxv_A 407 TETDIHKALDLLDRAFSE 424 (439)
T ss_dssp CHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999998865
No 198
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.79 E-value=1.1e-18 Score=181.82 Aligned_cols=293 Identities=11% Similarity=0.007 Sum_probs=191.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCe--EEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPR--LLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~--ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
....+++|+++++++|.+. .+|++|+|+|+.+++.++ .++||+ |++...++...... ...+...|++++.++
T Consensus 47 ~~~~~~l~~~la~~~~~~~----~i~~~~g~~a~~~a~~~~-~~~g~~~vvi~~~~~~~~~~~~-~~~~~~~g~~~~~v~ 120 (359)
T 3pj0_A 47 GAVIEDFETKIAKILGKQS----AVFFPSGTMAQQIALRIW-ADRKENRRVAYHPLSHLEIHEQ-DGLKELQQITPLLLG 120 (359)
T ss_dssp SHHHHHHHHHHHHHHTCSE----EEEESCHHHHHHHHHHHH-HHHHTCCEEEECTTCHHHHSST-THHHHHHCCEEEECS
T ss_pred CHHHHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHH-HhcCCCcEEEEeccceeeehhc-chHHHhcCceEEecC
Confidence 3567799999999999852 466689999999999888 677887 55554444312111 122234599999888
Q ss_pred ccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCC-CccCCHHHH----HHHHHcCcEEEEeCCCcCC------
Q 037063 256 FAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVT-GARYSYMWM----SVAAEKGWHVLLDATALGS------ 324 (588)
Q Consensus 256 ~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~t-G~~~pl~~I----~~a~~~g~~vvvDaa~~~~------ 324 (588)
. +++.+|+++|+++ . +++++|+++.++|++ |..+|.+++ ++|+++|++||+|+++...
T Consensus 121 ~--~~~~~d~~~l~~~-~--------~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~ 189 (359)
T 3pj0_A 121 T--ANQLLTIDDIKSL-R--------EPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQ 189 (359)
T ss_dssp C--TTSCCCHHHHHTC-S--------SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHT
T ss_pred C--cCCCcCHHHHHhc-c--------CCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhC
Confidence 6 4678999998876 4 689999999998887 799997774 7789999999999986432
Q ss_pred CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCC--CCCCceEeeecCCCcccccccccccccccC
Q 037063 325 KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGST--SSVSTIMGIEPSFSEIIELETLDESSQSKF 402 (588)
Q Consensus 325 ~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~--~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~ 402 (588)
....++. ...|+++.|+||.+|. |.| |+++.++++++.+.... .+
T Consensus 190 ~~~~~~~---~~~d~~~~s~sK~~~~-~~g-g~~~~~~~l~~~~~~~~~~~~---------------------------- 236 (359)
T 3pj0_A 190 KSAEEIC---ALFDSVYVSFYKGIGG-IAG-AILAGNDDFVQEAKIWKRRYG---------------------------- 236 (359)
T ss_dssp CCHHHHH---TTCSEEEEESSSTTCC-SSC-EEEEECHHHHHHHHHHHHHTT----------------------------
T ss_pred CCHHHhh---ccCCEEEEeccccCCC-cce-EEEECCHHHHHHHHHHHHHhC----------------------------
Confidence 1111111 2379999999997774 666 88888888877664321 11
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEe-CCCCCCCcccEEEEEee
Q 037063 403 PESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIY-GPKVMFDRGPSLAFNVF 481 (588)
Q Consensus 403 GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~-~p~~~~~rg~iv~f~~~ 481 (588)
++.........+++ .+++.. ++ ..++....++++.+.|.++ +++++. .| ..++++.+.+.
T Consensus 237 ~~~~~~~~~~~a~~-~~l~~~----~~-~~~~~~~~~~~l~~~L~~~---------~g~~~~~~~----~~~~~~~~~~~ 297 (359)
T 3pj0_A 237 GDLISLYPYILSAD-YYFEKR----IG-KMAEYFEAAKGLAERFNSC---------SGVKTVPEV----PVSNMFHVYFE 297 (359)
T ss_dssp CCCSCCHHHHHHHH-HHHHHH----GG-GHHHHHHHHHHHHHHHHTS---------TTEEEESSS----CSSSEEEEEES
T ss_pred CCcchhHHHHHHHH-HHHHHH----HH-HhHHHHHHHHHHHHHHhhC---------CCceeeccC----CcceEEEEEec
Confidence 00000011001111 333322 12 2334567788889999874 678875 23 34566666665
Q ss_pred cCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC---CCHHHHHHH
Q 037063 482 DWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL---TNFEDTYRL 558 (588)
Q Consensus 482 ~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~---~t~eDv~~l 558 (588)
... ..+...+.+.|.++||.++.|.... ..|...+|++++.- .+.|+++..
T Consensus 298 ~~~--~~~~~~l~~~l~~~GV~v~~g~~~~------------------------~~~~~~~r~~i~~~~~~~~~e~l~~~ 351 (359)
T 3pj0_A 298 NSA--DEIGAILTKIQDETGVGISGYLQEK------------------------SADVCAFEVSVGDAFAEIPAKNLELV 351 (359)
T ss_dssp SCH--HHHHHHHHHHHHHHCEECCSCCEEE------------------------ETTEEEEEEECCTTGGGSCHHHHHHH
T ss_pred Ccc--chhHHHHHHHHHhcCcEecCCcccc------------------------CCCceEEEEEecCccccCCHHHHHHH
Confidence 311 0234567888888999999874321 02334899988643 577888888
Q ss_pred HHHHHHh
Q 037063 559 WAFVSRF 565 (588)
Q Consensus 559 i~~l~~~ 565 (588)
++.|.+.
T Consensus 352 l~~l~~~ 358 (359)
T 3pj0_A 352 FRCLEKE 358 (359)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 8877654
No 199
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.79 E-value=1.7e-17 Score=177.86 Aligned_cols=350 Identities=10% Similarity=0.017 Sum_probs=214.6
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|||.++. |..++.+++++.+.+......++ +. ..+...+
T Consensus 41 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~------------------------------~~-~~~~~~~ 89 (433)
T 1zod_A 41 DGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFS------------------------------EM-LSRPVVD 89 (433)
T ss_dssp TCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCT------------------------------TC-CCHHHHH
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCccccc------------------------------cc-CCHHHHH
Confidence 56789998432 33478889888766532111000 00 1345678
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEE-EcCCCchhHHHHHHHHHH--------hcCCEEEE
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLL-TVYDHENEAAALMIESSK--------KRGARVSS 253 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll-~~~e~~s~~~~~~~~~a~--------~~G~~v~~ 253 (588)
++++++++++++++ .|+||+|+++|+.+++..+. +..+++|+ ....||......+ .... .....+..
T Consensus 90 l~~~la~~~~~~~~--~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~-~~~~~~~~~~~~~~~~~~~~ 166 (433)
T 1zod_A 90 LATRLANITPPGLD--RALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAA-SATYSAGRKGVGPAAVGSFA 166 (433)
T ss_dssp HHHHHHHHSCTTCC--EEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHH-HTCCSSCCSSSCCCCTTEEE
T ss_pred HHHHHHHhCCCCcC--EEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHH-hhcCCccccccCCCCCCceE
Confidence 88999999998655 49999999999999987541 12346665 4445664232221 1100 00123444
Q ss_pred EeccCC-----------CCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEE
Q 037063 254 AEFAWP-----------NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLL 317 (588)
Q Consensus 254 v~~~~~-----------~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvv 317 (588)
++++.. .+.+++++|+++|++ ...+++++|++..++|+||.+.| +++| ++|+++|+++|+
T Consensus 167 v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~----~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 242 (433)
T 1zod_A 167 IPAPFTYRPRFERNGAYDYLAELDYAFDLIDR----QSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLIL 242 (433)
T ss_dssp ECCCCTTSCCCEETTEECHHHHHHHHHHHHHH----HCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEE
T ss_pred ecCCcccccccCCchhhhHHHHHHHHHHHHHh----cCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Confidence 544210 012468899998872 11136788888877888998877 9999 999999999999
Q ss_pred eCCCc-CCCCCC--CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 318 DATAL-GSKDMD--TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 318 Daa~~-~~~d~~--~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
|+++. ++..-. .++.....+|++ ++.|.||. +.++|++++++++++.+.+....
T Consensus 243 DEv~~~~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G~~ig~~~~~~~~~~~~~~~~~~-------------------- 299 (433)
T 1zod_A 243 DEAQTGVGRTGTMFACQRDGVTPDIL--TLSKTLGA-GLPLAAIVTSAAIEERAHELGYL-------------------- 299 (433)
T ss_dssp ECTTTTTTTTSSSSTHHHHTCCCSEE--EECHHHHT-TSSCEEEEECHHHHHHHHHTTCC--------------------
T ss_pred eccccCCCcCchHhHHhhcCCCCCEE--EecccccC-CCCeeEEEEhHHHHHhhccCCCC--------------------
Confidence 99977 431101 111112237865 66698774 46699999999887766431100
Q ss_pred cccccccCCCC--CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCc
Q 037063 395 DESSQSKFPES--SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDR 472 (588)
Q Consensus 395 ~~~~f~e~GT~--~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~r 472 (588)
..+|. +..+ .++..++|+.+.+. .+.++++.+.+++++.|.++.. ..+.+..+. ..
T Consensus 300 ------~~~t~~~~~~~---~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~l~~-----~~~~~~~~~-----~~ 357 (433)
T 1zod_A 300 ------FYTTHVSDPLP---AAVGLRVLDVVQRD---GLVARANVMGDRLRRGLLDLME-----RFDCIGDVR-----GR 357 (433)
T ss_dssp ------CCCTTTTCHHH---HHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHH-----HCTTEEEEE-----EE
T ss_pred ------CCCCCCcCHHH---HHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHH-----hCCCeEEEE-----EE
Confidence 01111 2222 24455777776653 3567777888888888876510 013333221 24
Q ss_pred ccEEEEEeecCC--CC--CcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCC
Q 037063 473 GPSLAFNVFDWN--GT--RIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGC 548 (588)
Q Consensus 473 g~iv~f~~~~~~--g~--~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~ 548 (588)
|.++.+.+.+.. +. ......+.+.|.++||.++.|... .+..+||+++++
T Consensus 358 g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--------------------------~~~~~lRi~~~~ 411 (433)
T 1zod_A 358 GLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLP--------------------------GMGGVFRIAPPL 411 (433)
T ss_dssp TTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCT--------------------------TSCCEEEECCCT
T ss_pred EEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCC--------------------------CCCCEEEEECCc
Confidence 677777765310 00 012455666666889999876311 111289999999
Q ss_pred CCCHHHHHHHHHHHHHhhhh
Q 037063 549 LTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 549 ~~t~eDv~~li~~l~~~l~~ 568 (588)
..+.+|++++++.|++++++
T Consensus 412 ~~t~~~i~~~l~~l~~~l~~ 431 (433)
T 1zod_A 412 TVSEDEIDLGLSLLGQAIER 431 (433)
T ss_dssp TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999988754
No 200
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.66 E-value=6.6e-21 Score=201.70 Aligned_cols=300 Identities=12% Similarity=0.130 Sum_probs=193.2
Q ss_pred HHHHHHHHHH----hC--CCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcC-CCchhHHHHHHHHHHhcCCEEEEE
Q 037063 182 SKIRKRIMDF----MN--ISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVY-DHENEAAALMIESSKKRGARVSSA 254 (588)
Q Consensus 182 ~~~r~~ia~~----lg--a~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~-e~~s~~~~~~~~~a~~~G~~v~~v 254 (588)
.++|+.++++ +| ++++ .|++|+|+++|+.+++.++ .++||+|++.. .|++ . ...++..|++++.+
T Consensus 69 ~~l~~~la~~l~~~~g~~~~~~--~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~~~~-~----~~~~~~~g~~~~~~ 140 (392)
T 3b1d_A 69 DELLQAVLDWEKSEHQYSFDKE--DIVFVEGVVPAISIAIQAF-TKEGEAVLINSPVYPP-F----ARSVRLNNRKLVSN 140 (392)
Confidence 3455555554 45 4444 4999999999999999998 88999976543 3442 2 34456679999998
Q ss_pred eccCCC--CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC---HHHH-HHHHHcCcEEEEeCCCcCCC---
Q 037063 255 EFAWPN--LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS---YMWM-SVAAEKGWHVLLDATALGSK--- 325 (588)
Q Consensus 255 ~~~~~~--~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p---l~~I-~~a~~~g~~vvvDaa~~~~~--- 325 (588)
+.+..+ ..+|+++|++++++ .++++|++++++|+||..+| +++| ++|+++|+++|+|+++....
T Consensus 141 ~~~~~~g~~~~d~~~l~~~l~~-------~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g 213 (392)
T 3b1d_A 141 SLKEENGLFQIDFEQLENDIVE-------NDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFG 213 (392)
Confidence 885232 34888999988862 46789999999999999998 6667 88999999999999965420
Q ss_pred -CCCC-CCCCC--CCCcEEEeccCccCCCCCCceEEEEEeCc-chhcccCCCCCCCceEeeecCCCcccccccccccccc
Q 037063 326 -DMDT-LGLSL--FKPDFLICSFYKIFGENPSGFGCLFVKKS-SASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS 400 (588)
Q Consensus 326 -d~~~-l~l~~--~~~D~vv~S~~K~~G~~P~G~G~L~v~~~-~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~ 400 (588)
...+ ..+.. ...++++.|++|.+|.+..++|+++++++ +++.+.......
T Consensus 214 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~------------------------- 268 (392)
T 3b1d_A 214 HEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVN------------------------- 268 (392)
Confidence 0111 11111 33568899999988843446899998754 666554432110
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE-EE
Q 037063 401 KFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA-FN 479 (588)
Q Consensus 401 e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~-f~ 479 (588)
..++.+.... +++.++|+.... .++++.++.+.+++++.+.|.+. .|+++++.+ .++++. +.
T Consensus 269 ~~~~~~~~~~---~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~l~~~--------~~~~~~~~~-----~~~~~~~i~ 331 (392)
T 3b1d_A 269 NHHEVSSLGY---IATETAYRYGKP-WLVALKAVLEENIQFAVEYFAQE--------APRLKVMKP-----QGTYLIWLD 331 (392)
Confidence 0011122211 223344443222 25677777888888888888761 245665543 344443 44
Q ss_pred eecCCCCCcCHHHHHHHH-HhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHH
Q 037063 480 VFDWNGTRIDPALVQKLA-DRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRL 558 (588)
Q Consensus 480 ~~~~~g~~i~~~~v~~~l-~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~l 558 (588)
+... + .+...+.+.| +++||.+++|..+.+ .+.+++|++++. +.|+|+++
T Consensus 332 ~~~~-~--~~~~~l~~~l~~~~gi~v~~g~~f~~------------------------~~~~~iRi~~~~--~~e~i~~~ 382 (392)
T 3b1d_A 332 FSDY-G--LTDDALFTLLHDQAKVILNRGSDYGS------------------------EGELHARLNIAA--PKSLVEEI 382 (392)
Confidence 4321 1 2344455555 588999988744310 112389999875 57999999
Q ss_pred HHHHHHhhh
Q 037063 559 WAFVSRFLD 567 (588)
Q Consensus 559 i~~l~~~l~ 567 (588)
++.|+++++
T Consensus 383 l~~l~~~l~ 391 (392)
T 3b1d_A 383 CKRIVCCLP 391 (392)
Confidence 999988764
No 201
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.79 E-value=2.4e-18 Score=179.31 Aligned_cols=293 Identities=10% Similarity=-0.004 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC--eEEEcCCCchhHHHHHHHHHHhcCCEEEEEec
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP--RLLTVYDHENEAAALMIESSKKRGARVSSAEF 256 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd--~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~ 256 (588)
....++++++++++|.+ . .++++|+|+|+.+++.++ .++|| .|++...+|...+.. ...+...|++++.++.
T Consensus 47 ~~~~~l~~~la~~~~~~---~-~i~~~~G~~a~~~al~~~-~~~gd~~~vi~~~~~~~~~~~~-~~~~~~~g~~~~~v~~ 120 (357)
T 3lws_A 47 AIIEPFEQKFADVLGMD---D-AVFFPSGTMAQQVALRIW-SDETDNRTVAYHPLCHLEIHEQ-DGLKELHPIETILVGA 120 (357)
T ss_dssp TTHHHHHHHHHHHHTCS---E-EEEESCHHHHHHHHHHHH-HHHHTCCEEEECTTCHHHHSST-THHHHHSSCEEEECSC
T ss_pred hHHHHHHHHHHHHhCCC---c-EEEecCcHHHHHHHHHHH-hhcCCCcEEEecccceeeeecc-chhhhccCcEEEEecC
Confidence 34568999999999984 2 466688899999988887 67788 566654444312211 1233456999988875
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCC-CccCC---HHHH-HHHHHcCcEEEEeCCCc---C---CC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVT-GARYS---YMWM-SVAAEKGWHVLLDATAL---G---SK 325 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~t-G~~~p---l~~I-~~a~~~g~~vvvDaa~~---~---~~ 325 (588)
+++.+|+++|+++ . ++++|+++.++|++ |..+| +++| ++|+++|++||+|+++. . +.
T Consensus 121 --~~~~~d~~~l~~~-~---------~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 188 (357)
T 3lws_A 121 --ADRLMTLDEIKAL-P---------DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEK 188 (357)
T ss_dssp --TTSCCCHHHHHTC-C---------SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTC
T ss_pred --CCCCcCHHHHhcC-c---------CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCC
Confidence 4567999888754 2 28999999999998 99998 5567 88999999999999865 1 21
Q ss_pred CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 326 DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 326 d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
....+. ..+|.++.|++|.++. |.| |+++.++++++.+...... ..++.
T Consensus 189 ~~~~~~---~~~d~~~~s~sK~~~~-~~g-g~~~~~~~~~~~~~~~~~~--------------------------~~~~~ 237 (357)
T 3lws_A 189 TAAEIA---GLFDSIYISFYKGLGG-IAG-AILAGPAAFCQTARIWKRR--------------------------YGGDL 237 (357)
T ss_dssp CHHHHH---TTSSEEEEESSSTTCC-SSC-EEEEECHHHHHHHHHHHHH--------------------------TTCCC
T ss_pred ChHHHH---hcCCEEEEeccccCCC-Cce-EEEEcCHHHHHHHHHHHHH--------------------------hcCCc
Confidence 111221 2378999999998853 778 9999888887665422100 00001
Q ss_pred CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEe-CCCCCCCcccEEEEEeecCC
Q 037063 406 SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIY-GPKVMFDRGPSLAFNVFDWN 484 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~-~p~~~~~rg~iv~f~~~~~~ 484 (588)
....... ++...+|+.. ++.+ ++..+.++++.+.|.++ +++++. .| ..+.++.+.+.+..
T Consensus 238 ~~~~~~~-~~~~~~l~~~----~~~~-~~~~~~~~~l~~~L~~~---------~g~~~~~~~----~~~~~~~~~~~~~~ 298 (357)
T 3lws_A 238 ISLYPYI-VSADYYYELR----KDRM-GQYYEQAKQLAEQFNAL---------PGVHTTPEV----PVSNMFHLHFDGQA 298 (357)
T ss_dssp SCCHHHH-HHHHHHHHHH----TTCH-HHHHHHHHHHHHHHHTS---------TTEEEESSS----CSSSEEEEEEESCH
T ss_pred ccchHHH-HHHHHHHHHH----HHHH-HHHHHHHHHHHHHHHhC---------CCCeeccCC----CcceEEEEEecCCh
Confidence 1011100 1112344331 1222 23456678888888874 678874 33 34677777776420
Q ss_pred CCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC---CCHHHHHHHHHH
Q 037063 485 GTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL---TNFEDTYRLWAF 561 (588)
Q Consensus 485 g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~---~t~eDv~~li~~ 561 (588)
..+...+.+.|.++||.++.|.... .|...+|++++.. .+.++++..++.
T Consensus 299 --~~~~~~~~~~l~~~Gi~v~~g~~~~-------------------------~~~~~~r~~i~~~~~~~~~~~l~~al~~ 351 (357)
T 3lws_A 299 --ADISPKLEQVQEETGLGFVGYLVDK-------------------------DGYCSTEISVGDAYGELDQQTRDAGFAR 351 (357)
T ss_dssp --HHHHHHHHHHHHHHCEESCSCCEEC-------------------------SSEEEEEEEBCTTGGGSCHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHhcCeEEecccccC-------------------------CCceEEEEEecchhhhcCHHHHHHHHHH
Confidence 0124567788888999999873210 2333899998854 477888888887
Q ss_pred HHHhh
Q 037063 562 VSRFL 566 (588)
Q Consensus 562 l~~~l 566 (588)
|.+.+
T Consensus 352 l~~al 356 (357)
T 3lws_A 352 LRQAF 356 (357)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 77654
No 202
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.78 E-value=1.4e-17 Score=178.28 Aligned_cols=356 Identities=11% Similarity=-0.023 Sum_probs=204.1
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+.-|||..+. |..++.+++++.+.+.......+ . . ...+...+
T Consensus 27 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~------------------------~-~-----~~~~~~~~ 76 (430)
T 3i4j_A 27 AGRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHG------------------------S-Q-----FSSDVLEE 76 (430)
T ss_dssp TSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCT------------------------T-T-----CEEHHHHH
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhcccccc------------------------c-c-----cCCHHHHH
Confidence 56779998774 33488888888666532111000 0 0 01456678
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCC--------CCCCeEE-EcCCCchhHHHHHHHHHHhcC------
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPF--------YSNPRLL-TVYDHENEAAALMIESSKKRG------ 248 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~--------~~gd~ll-~~~e~~s~~~~~~~~~a~~~G------ 248 (588)
++++++++++.++++ |+||+|+++|+.+++..+ . ..+++|+ ....||...... ........
T Consensus 77 l~~~la~~~~~~~~~--v~~~~gg~ea~~~al~~~-~~~~~~~g~~~~~~vi~~~~~yhg~~~~~-~~~~~~~~~~~~~~ 152 (430)
T 3i4j_A 77 YAGRLARFVGLPTFR--FWAVSGGSEATESAVKLA-RQYHVERGEPGRFKVITRVPSYHGASLGS-LAASGMGARRELYT 152 (430)
T ss_dssp HHHHHHHHTTCTTCE--EEEESSHHHHHHHHHHHH-HHHHHHTTCTTCCEEEEETTC-----------------------
T ss_pred HHHHHHHhCCCCCCE--EEEeCcHHHHHHHHHHHH-HHHHHhcCCCCCcEEEEEeCCcCCCCccc-ccccCccccccccC
Confidence 999999999987654 999999999999988876 3 2356765 455555422111 11100000
Q ss_pred ---C--EEEEEeccCCC---CccCHHHHHHHHhhhccccCCCcceEEEEeCCCC-CCCccCC----HHHH-HHHHHcCcE
Q 037063 249 ---A--RVSSAEFAWPN---LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSK-VTGARYS----YMWM-SVAAEKGWH 314 (588)
Q Consensus 249 ---~--~v~~v~~~~~~---~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn-~tG~~~p----l~~I-~~a~~~g~~ 314 (588)
. .+..++.+ .. +..+.++|+++|++ ...+++++|++..+++ ++|.+.+ +++| ++|+++|++
T Consensus 153 ~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~l~~----~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 227 (430)
T 3i4j_A 153 PLMRPEAWPKLPKP-DPARNGAEDAEGLRALLER----EGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGII 227 (430)
T ss_dssp ---CGGGSCEECCC-CTTSCHHHHHTHHHHHHHH----HCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCE
T ss_pred CcCCCCCceEcCCC-cccchhhHHHHHHHHHHHh----cCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence 0 23334432 11 23456889998872 1114578888888888 9999888 9999 999999999
Q ss_pred EEEeCCCc-CCCC--CCCCCCC-CCCCcEEEeccCccCCCCC-CceEEEEEeCcchhcccCCCCCCCceEeeecCCCccc
Q 037063 315 VLLDATAL-GSKD--MDTLGLS-LFKPDFLICSFYKIFGENP-SGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEII 389 (588)
Q Consensus 315 vvvDaa~~-~~~d--~~~l~l~-~~~~D~vv~S~~K~~G~~P-~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~ 389 (588)
+|+|.++. ++.. ...+..- ...+|+++ +.|.+|. . ..+|++++++++++.+.+....
T Consensus 228 li~DEv~~~~~~~g~~~~~~~~~~~~~di~t--~sK~l~~-G~~r~G~~~~~~~i~~~~~~~~~~--------------- 289 (430)
T 3i4j_A 228 FIADEVMSGMGRCGSPLALSRWSGVTPDIAV--LGKGLAA-GYAPLAGLLAAPQVYETVMGGSGA--------------- 289 (430)
T ss_dssp EEEECTTTTTTTTSSSSGGGGTTTCCCSEEE--ECGGGTT-TSSCCEEEEECHHHHHHHHHTTCB---------------
T ss_pred EEEechhhCCCcccchhhhhhhcCCCCcEEE--EcccccC-CccccEEEEECHHHHHHHhccCCc---------------
Confidence 99999865 3211 1111111 22378765 5598873 3 4589999999888766532100
Q ss_pred ccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCC
Q 037063 390 ELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVM 469 (588)
Q Consensus 390 ~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~ 469 (588)
+...+|.+...+ ..++..++|+.++. +.+.++++++.+++++.|.++.. ..+.+..+.
T Consensus 290 ---------~~~~~t~~~~~~-~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~---- 347 (430)
T 3i4j_A 290 ---------FMHGFTYAGHPV-SVAAGLSVLDIVER---EDLTGAAKERGAQLLAGLQALQA-----RFPQMMQVR---- 347 (430)
T ss_dssp ---------CCCCCTTTTCHH-HHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHH-----HCTTEEEEE----
T ss_pred ---------ccccCCCCCCHH-HHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHH-----hCCCeEEEE----
Confidence 000111111111 12344566776654 33445555555555555554310 024454432
Q ss_pred CCcccEEEEEeecCCCC-----CcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEE
Q 037063 470 FDRGPSLAFNVFDWNGT-----RIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTA 544 (588)
Q Consensus 470 ~~rg~iv~f~~~~~~g~-----~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRv 544 (588)
..|.++.+.+.+.... ......+.+.|.++||.++.+.... .. .+...+|+
T Consensus 348 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~---------------~~--------~~~~~iRi 403 (430)
T 3i4j_A 348 -GTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAE---------------PN--------GRGDHLLL 403 (430)
T ss_dssp -EETTEEEEEEC------------CHHHHHHHHHHTTEECC----------------------------------CEEEE
T ss_pred -EEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEeccccc---------------CC--------CCCCEEEE
Confidence 2467777776542110 0113556777778999998752210 00 11238999
Q ss_pred ecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 545 ALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 545 Slg~~~t~eDv~~li~~l~~~l~~ 568 (588)
++++..+.||++++++.|++++++
T Consensus 404 ~~~~~~t~e~i~~~l~~l~~~l~~ 427 (430)
T 3i4j_A 404 GPPLSITAAEVDGLLALLAGALED 427 (430)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998875
No 203
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.78 E-value=1.4e-18 Score=186.42 Aligned_cols=287 Identities=12% Similarity=0.026 Sum_probs=185.6
Q ss_pred HHHHHHHHHHhC------CCCCCceEEEecCHHHHHHHHHHhCC-------CCCCCeEEEcCCCchhHHHHHHHHHHhcC
Q 037063 182 SKIRKRIMDFMN------ISEDDYTLVFTANQSSAFKLLAESYP-------FYSNPRLLTVYDHENEAAALMIESSKKRG 248 (588)
Q Consensus 182 ~~~r~~ia~~lg------a~~~e~~vvft~g~T~al~lv~~s~~-------~~~gd~ll~~~e~~s~~~~~~~~~a~~~G 248 (588)
.++|+.|+++++ ++++ .|++|+|+++++.+++.++. +++||+|++....+... ...++..|
T Consensus 103 ~~lr~aia~~~~~~~~~~~~~~--~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~----~~~~~~~g 176 (427)
T 2hox_A 103 FELEKTIKELHEVVGNAAAKDR--YIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVF----REQTKYFD 176 (427)
T ss_dssp HHHHHHHHHHHHHHTCBCCTTC--EEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHH----HHHHHHSC
T ss_pred HHHHHHHHHHHHHhCCcCCCCC--EEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccH----HHHHHHcC
Confidence 477888888875 5554 49999999999999999984 78999987665554322 34456678
Q ss_pred CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHHHcCcEEEEeCCCcCC-CCC
Q 037063 249 ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAAEKGWHVLLDATALGS-KDM 327 (588)
Q Consensus 249 ~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~~g~~vvvDaa~~~~-~d~ 327 (588)
++++... +|.++|+++++ +++++|++++++||||.+++ +.+ + ++.++.|.+.+-+ ..+
T Consensus 177 ~~~~~~~-------~d~~~l~~~~~--------~~~k~v~l~~p~NPtG~~~~-~~l---~--~~~~i~d~~~~~~~~s~ 235 (427)
T 2hox_A 177 KKGYVWA-------GNAANYVNVSN--------PEQYIEMVTSPNNPEGLLRH-AVI---K--GCKSIYDMVYYWPHYTP 235 (427)
T ss_dssp BTTEEEE-------EEGGGGTTCSC--------GGGEEEEEESSCTTTCCCCC-CSS---T--TCEEEEECTTCSTTTSC
T ss_pred Ceeeeec-------CCHHHHHHhhc--------CCceEEEEcCCCCCcccccH-HHH---c--CCCEEEeecccCCCCCc
Confidence 8776433 45677777665 57899999999999999999 433 2 5678889875532 112
Q ss_pred CCCCCCCCCCcEEEeccCccCCCCCCceEEEEEe-CcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCC
Q 037063 328 DTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVK-KSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESS 406 (588)
Q Consensus 328 ~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~-~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~ 406 (588)
..+ . ...|+++.|++|.+|.+...+|+++++ +++++.+....... ..+++.
T Consensus 236 ~~~--~-~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~~~~-------------------------~~~~~~ 287 (427)
T 2hox_A 236 IKY--K-ADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKN-------------------------TEGTPR 287 (427)
T ss_dssp CCS--C-BCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHHHH-------------------------TSSCCH
T ss_pred ccc--C-CCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHHHhc-------------------------CCCCCH
Confidence 222 2 347999999999999422238999995 67766665332110 112222
Q ss_pred ccchhhHHHHHHHHHHHHH-h-----C----HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEE--eC-CCC-----
Q 037063 407 ISGVSSKLVECKGLDHADA-L-----G----LILISNRARYLINWLANALMNLHHPHSETGIPLVRI--YG-PKV----- 468 (588)
Q Consensus 407 ~~~~~~~~al~~aL~~l~~-~-----G----~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i--~~-p~~----- 468 (588)
+.+. ++..+|+...+ + + ++...++++...+++.+.|+++ +++++ +. |..
T Consensus 288 ~~q~----a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------~g~~~~~~~~~~~~~~~~ 354 (427)
T 2hox_A 288 ETQL----RSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQS---------DRFSYQELPQSEYCNYFR 354 (427)
T ss_dssp HHHH----HHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTS---------SSEECCCCCSCEEETTTT
T ss_pred HHHH----HHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhC---------cCcccccccccccccccc
Confidence 2222 22234432110 0 1 3456677778888899988874 45554 22 210
Q ss_pred -CCCccc-EEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEec
Q 037063 469 -MFDRGP-SLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAAL 546 (588)
Q Consensus 469 -~~~rg~-iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSl 546 (588)
....++ .+-+.+.. + ..+.+.++++++||.+++|..|. .+.++||+|+
T Consensus 355 ~~~p~~g~f~~~~~~~-~----~~~~~~~ll~~~gI~v~pg~~f~-------------------------~~~~~~Ris~ 404 (427)
T 2hox_A 355 RMRPPSPSYAWVKCEW-E----EDKDCYQTFQNGRINTQNGVGFE-------------------------ASSRYVRLSL 404 (427)
T ss_dssp EEECCCCSEEEEEECS-G----GGCSHHHHHHHTTEECEEGGGGT-------------------------SCTTEEEEEC
T ss_pred ccCCCCceEEEEECCC-c----HHHHHHHHHHHCCEEEcCCCccC-------------------------CCCCEEEEEe
Confidence 012234 44445543 1 12335667778999999986652 1123899999
Q ss_pred CCCCCHHHHHHHHHHHHHhhhh
Q 037063 547 GCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 547 g~~~t~eDv~~li~~l~~~l~~ 568 (588)
+ ++.|+++++++.|++++++
T Consensus 405 ~--~~~e~l~~~l~~l~~~~~~ 424 (427)
T 2hox_A 405 I--KTQDDFDQLMYYLKDMVKA 424 (427)
T ss_dssp S--SCHHHHHHHHHHHHHHHTC
T ss_pred c--CCHHHHHHHHHHHHHHHhh
Confidence 8 4889999999999998754
No 204
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.78 E-value=1.3e-16 Score=172.05 Aligned_cols=352 Identities=11% Similarity=0.050 Sum_probs=214.2
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+.-|||..+. |.-++.+++++.+.+..... .+ . ....+...+
T Consensus 47 ~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~-~~------------------------~------~~~~~~~~~ 95 (452)
T 3n5m_A 47 QGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSY-FP------------------------M------SQSHEPAIK 95 (452)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCC-CC------------------------T------TSEEHHHHH
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCC-cc------------------------c------ccCCHHHHH
Confidence 56789998665 44578899988766632111 00 0 001466779
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCC-----C---CCCeEE-EcCCCchhHHHHHHHHHHhcC------
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPF-----Y---SNPRLL-TVYDHENEAAALMIESSKKRG------ 248 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~-----~---~gd~ll-~~~e~~s~~~~~~~~~a~~~G------ 248 (588)
++++++++++.+.+ |+||+|+|+|+..++..+ . + ++++|+ ....||......+ ...|
T Consensus 96 la~~l~~~~~~~~~---v~~~~ggseA~~~al~~~-~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~----~~~~~~~~~~ 167 (452)
T 3n5m_A 96 LAEKLNEWLGGEYV---IFFSNSGSEANETAFKIA-RQYYAQKGEPHRYKFMSRYRGYHGNTMATM----AATGQAQRRY 167 (452)
T ss_dssp HHHHHHHHHTSCEE---EEEESSHHHHHHHHHHHH-HHHHHTTTCTTCCEEEEETTCCCCSSHHHH----HSCCCGGGTT
T ss_pred HHHHHHHhCCCCce---EEEeCchHHHHHHHHHHH-HHHHHhcCCCCCCEEEEECCCcCCCCHHHH----hcCCchhhcc
Confidence 99999999987532 999999999999988876 3 3 567765 5556664222211 1111
Q ss_pred ------CEEEEEeccCCCCcc---C---------HHHHHHHHhhhccccCCCcceEEEEeCC-CCCCCccCC----HHHH
Q 037063 249 ------ARVSSAEFAWPNLRI---H---------SGKLMKKIVGKRKKKKKKKRGLFVFPLQ-SKVTGARYS----YMWM 305 (588)
Q Consensus 249 ------~~v~~v~~~~~~~~i---~---------~e~l~~~i~~~~~~~~~~~t~Lv~~~~~-sn~tG~~~p----l~~I 305 (588)
..+..++.. ...+. + .++|+++|++ ...+++++|++..+ +| +|.+.| +++|
T Consensus 168 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~~l~~----~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l 241 (452)
T 3n5m_A 168 QYEPFASGFLHVTPP-DCYRMPGIERENIYDVECVKEVDRVMTW----ELSETIAAFIMEPIITG-GGILMAPQDYMKAV 241 (452)
T ss_dssp TTCCCCSCEEEECCC-CTTTSTTTTTSCGGGCHHHHHHHHHHHH----HCGGGEEEEEECSSBTT-TTCBCCCTTHHHHH
T ss_pred ccCCCCCCCeEeCCC-ccccCccCCchhhHHHHHHHHHHHHHHh----cCCCCEEEEEEccccCC-CCeeeCCHHHHHHH
Confidence 124444432 11111 1 7889988861 11246888999888 89 999998 9999
Q ss_pred -HHHHHcCcEEEEeCCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEee
Q 037063 306 -SVAAEKGWHVLLDATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGI 381 (588)
Q Consensus 306 -~~a~~~g~~vvvDaa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~ 381 (588)
++|+++|+++|+|.++. ++.. ..........+|+++ +.|.+|.++.++|++++++++++.+...... +
T Consensus 242 ~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t--~sK~l~~G~~~ig~~~~~~~i~~~~~~~~~~--~---- 313 (452)
T 3n5m_A 242 HETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIIT--MAKGITSAYLPLSATAVKREIYEAFKGKGEY--E---- 313 (452)
T ss_dssp HHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEE--ECGGGGTTSSCCEEEEEEHHHHGGGCSSSTT--C----
T ss_pred HHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEe--ecccccCCCcceEEEEECHHHHHHHhhccCC--C----
Confidence 99999999999999965 3211 111111122378765 5697764226789999999988877541100 0
Q ss_pred ecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeE
Q 037063 382 EPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLV 461 (588)
Q Consensus 382 ~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v 461 (588)
.+...+|.+...+. .++..++|+.++. +.+.++++++.+++++.|.++.. +.+.+
T Consensus 314 ----------------~~~~~~t~~~~~~~-~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~-----~~~~~ 368 (452)
T 3n5m_A 314 ----------------FFRHINTFGGNPAA-CALALKNLEIIEN---ENLIERSAQMGSLLLEQLKEEIG-----EHPLV 368 (452)
T ss_dssp ----------------SCCCCCSSTTCHHH-HHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHT-----TCTTE
T ss_pred ----------------CccccCCCCCCHHH-HHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHh-----cCCCe
Confidence 00011222222221 2344466766654 34566666777777777765411 12334
Q ss_pred EEeCCCCCCCcccEEEEEeecCCC--CCcC---HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCc
Q 037063 462 RIYGPKVMFDRGPSLAFNVFDWNG--TRID---PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETR 536 (588)
Q Consensus 462 ~i~~p~~~~~rg~iv~f~~~~~~g--~~i~---~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~ 536 (588)
..+. ..|.++.+.+.+... ..++ ...+.+.|.++||.++++..+.+
T Consensus 369 ~~~~-----~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~------------------------ 419 (452)
T 3n5m_A 369 GDIR-----GKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTA------------------------ 419 (452)
T ss_dssp EEEE-----ESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSST------------------------
T ss_pred EEEE-----EEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccC------------------------
Confidence 3322 245667776642111 1111 13466777788999987643311
Q ss_pred CCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 537 SGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 537 ~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
.+...||+++++..|.|||+++++.|++++++
T Consensus 420 ~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 420 GYNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp TCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 11239999999999999999999999998763
No 205
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.78 E-value=3.9e-17 Score=176.75 Aligned_cols=346 Identities=12% Similarity=0.046 Sum_probs=210.4
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|||..+. |.-++.+++++.+.+.......+ .. . + ..+...+
T Consensus 48 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-----------------------~~-~---~--~~~~~~~ 98 (459)
T 4a6r_A 48 EGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNT-----------------------FF-K---T--THPAVVE 98 (459)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCT-----------------------TS-S---S--CCHHHHH
T ss_pred CCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhcccccc-----------------------cc-c---c--CCHHHHH
Confidence 56789998764 44578889988766643111110 00 0 0 1456678
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC--------CCCeEE-EcCCCchhHHHHHHHHH---------H
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY--------SNPRLL-TVYDHENEAAALMIESS---------K 245 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~--------~gd~ll-~~~e~~s~~~~~~~~~a---------~ 245 (588)
++++++++++.+.+. |+||+|+++|+..++..+ .+ ++++|+ ....||......+ ... .
T Consensus 99 la~~l~~~~~~~~~~--v~~~~ggseA~~~al~~~-~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~-~~~~~~~~~~~~~ 174 (459)
T 4a6r_A 99 LSSLLAEVTPAGFDR--VFYTNSGSESVDTMIRMV-RRYWDVQGKPEKKTLIGRWNGYHGSTIGGA-SLGGMKYMHEQGD 174 (459)
T ss_dssp HHHHHHHHSCTTCCE--EEEESSHHHHHHHHHHHH-HHHHHHTTCTTCCEEEEETTCCCCSSHHHH-HHSCCTTTC---C
T ss_pred HHHHHHHhCCCCCCE--EEEeCchHHHHHHHHHHH-HHHHHhcCCCCCCEEEEECCCcCCccHHHH-hhcCChhhccccC
Confidence 999999999876654 999999999999988876 33 356665 4555664232211 110 0
Q ss_pred hcCCEEEEEeccC----CCCccC--------HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHH
Q 037063 246 KRGARVSSAEFAW----PNLRIH--------SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVA 308 (588)
Q Consensus 246 ~~G~~v~~v~~~~----~~~~i~--------~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a 308 (588)
.....+..++... .+. ++ .++|+++|.+ ...+++++|++..+++.+|.+.| +++| ++|
T Consensus 175 ~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~----~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~ 249 (459)
T 4a6r_A 175 LPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILE----IGADKVAAFVGEPIQGAGGVIVPPATYWPEIERIC 249 (459)
T ss_dssp CSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHH----HCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHH
T ss_pred CCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHH----cCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHH
Confidence 1112344555321 111 34 6788888862 11246788888888999999998 9999 999
Q ss_pred HHcCcEEEEeCCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhccc---CCCCCCCceEeee
Q 037063 309 AEKGWHVLLDATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLS---GSTSSVSTIMGIE 382 (588)
Q Consensus 309 ~~~g~~vvvDaa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~---~~~~g~~g~v~~~ 382 (588)
+++|+++|+|.++. ++.. ..........+|++++ .|.+|.+..++|++++++++++.+. +...+ ++
T Consensus 250 ~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t~--sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~~--~t---- 321 (459)
T 4a6r_A 250 RKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTA--AKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHG--FT---- 321 (459)
T ss_dssp HHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEE--CGGGGTTSSCCEEEEECHHHHHHHHHHCTTHHH--HH----
T ss_pred HHcCCEEEEeccccCCCcccccchHhhcCCCCCeeeh--hhhhcCCCCCccceeeCHHHHHHhhcCCCcccC--CC----
Confidence 99999999999965 2211 1101111224787765 4966521246899999999887665 22211 00
Q ss_pred cCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHH-HHHHHHHHHH-HcccCCCCCCCCCe
Q 037063 383 PSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRAR-YLINWLANAL-MNLHHPHSETGIPL 460 (588)
Q Consensus 383 ~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~-~L~~~l~~~L-~~L~h~~~~~g~~~ 460 (588)
| +.+..+ .++..++|+.++.. .+.++++ .+.+++++.| ..|. +.+.
T Consensus 322 ----------------~----~~~~~~---~aaa~aal~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~------~~~~ 369 (459)
T 4a6r_A 322 ----------------Y----SGHPVC---AAVAHANVAALRDE---GIVQRVKDDIGPYMQKRWRETFS------RFEH 369 (459)
T ss_dssp ----------------H----CSCHHH---HHHHHHHHHHHHHT---CHHHHHHHTHHHHHHHHHHHHHT------TCTT
T ss_pred ----------------C----CCCHHH---HHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHh------cCCC
Confidence 0 011111 13444667666542 3444555 5555555555 3331 1244
Q ss_pred EEEeCCCCCCCcccEEEEEeecCCCC--Cc-----CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCC
Q 037063 461 VRIYGPKVMFDRGPSLAFNVFDWNGT--RI-----DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTN 533 (588)
Q Consensus 461 v~i~~p~~~~~rg~iv~f~~~~~~g~--~i-----~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~ 533 (588)
+..+. ..|.++.+.+.+.... .+ ....+.+.|.++||.++++
T Consensus 370 ~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-------------------------- 418 (459)
T 4a6r_A 370 VDDVR-----GVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRAC-------------------------- 418 (459)
T ss_dssp EEEEE-----EETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEE--------------------------
T ss_pred eEEEE-----EEEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecC--------------------------
Confidence 44332 3467777776532111 01 0345666677789998864
Q ss_pred CCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 534 ETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 534 ~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
. .+||+++++..+.||++++++.|++++++.
T Consensus 419 ---g--~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 449 (459)
T 4a6r_A 419 ---G--DHIVSAPPLVMTRAEVDEMLAVAERCLEEF 449 (459)
T ss_dssp ---T--TEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ---C--CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 289999999999999999999999988653
No 206
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.78 E-value=1.6e-17 Score=186.90 Aligned_cols=310 Identities=11% Similarity=0.018 Sum_probs=206.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
...+.++++.+|+++|++ +.+++++|++.|+..++.++ +++||+|+++...|..... .+...|+++++++.+
T Consensus 194 ~g~i~eaE~~lA~~fGa~---~a~~v~nGts~An~~ai~al-~~pGD~VLv~r~~H~S~~~----~l~lsGa~pv~v~~~ 265 (715)
T 3n75_A 194 SGPHKEAEQYIARVFNAD---RSYMVTNGTSTANKIVGMYS-APAGSTILIDRNCHKSLTH----LMMMSDVTPIYFRPT 265 (715)
T ss_dssp BTHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHHH-CCTTCEEEEESSCCHHHHH----HHHHSCCEEEEECCC
T ss_pred cHHHHHHHHHHHHHhCCC---CceEECcHHHHHHHHHHHHh-CCCCCEEEECCCccHHHHH----HHHHcCCEEEEEecc
Confidence 456789999999999995 34777777789999999998 8999998766655543443 345679999999875
Q ss_pred CCCCc----c-----CHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCC-
Q 037063 258 WPNLR----I-----HSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKD- 326 (588)
Q Consensus 258 ~~~~~----i-----~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d- 326 (588)
+.+.. + |+++|+++|.+. ...+.+++++++++ |++|..+|+++| ++|++++ +++|+|+.....
T Consensus 266 ~~~~gi~~~i~~~~~d~e~Le~~l~~~---~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f 339 (715)
T 3n75_A 266 RNAYGILGGIPQSEFQHATIAKRVKET---PNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNF 339 (715)
T ss_dssp BCTTCCBCCCCGGGGSHHHHHHHHHHS---TTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGG
T ss_pred ccccccccCcccccCCHHHHHHHHhhC---cCccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEcccccccccc
Confidence 33222 3 899999999731 11112348888888 999999999999 8887653 799999765410
Q ss_pred ------CCCCCCCCCCCcEE---EeccCccCCCCCCceEEEEEeCcchh-cccCCCCCCCceEeeecCCCcccccccccc
Q 037063 327 ------MDTLGLSLFKPDFL---ICSFYKIFGENPSGFGCLFVKKSSAS-VLSGSTSSVSTIMGIEPSFSEIIELETLDE 396 (588)
Q Consensus 327 ------~~~l~l~~~~~D~v---v~S~~K~~G~~P~G~G~L~v~~~~~~-~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~ 396 (588)
...+... ..+|++ +.|+||.+|. +++.|+++++++... .+....
T Consensus 340 ~~~~~~~~al~~g-~~aD~vii~~~S~hKtL~g-ltqgs~i~v~~~i~~~~~~~~~------------------------ 393 (715)
T 3n75_A 340 SPIYEGKCGMSGG-RVEGKVIYETQSTHKLLAA-FSQASMIHVKGDVNEETFNEAY------------------------ 393 (715)
T ss_dssp SGGGTTSSTTSSS-CCTTCEEEEEECHHHHSSC-CTTCEEEEEESCCCHHHHHHHH------------------------
T ss_pred CCccccccccccC-cCCCEEEEEEecccccccC-CCCeeEEEeCchhhHHHHHHHH------------------------
Confidence 1122211 125765 8999997773 778899999876311 111000
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCe--EEEeCCCCCC---
Q 037063 397 SSQSKFPESSISGVSSKLVECKGLDHADA-LGLILISNRARYLINWLANALMNLHHPHSETGIPL--VRIYGPKVMF--- 470 (588)
Q Consensus 397 ~~f~e~GT~~~~~~~~~~al~~aL~~l~~-~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~--v~i~~p~~~~--- 470 (588)
..+ ..+++++..+ +++..|++++.. .| +.+.+++..++++++++|.+++.- .++ ++++++....
T Consensus 394 ~~~-~STSpsy~~~---AsldaA~~~~~~~~g-~~~~~~l~~~a~~~r~~L~~i~~~-----~~~~~~~~~~~~~~~~~~ 463 (715)
T 3n75_A 394 MMH-TTTSPHYGIV---ASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTE-----SDGWFFDVWQPDHIDTTE 463 (715)
T ss_dssp HHT-SCSSCCHHHH---HHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-----SSSCCCEESSCSCCCSCS
T ss_pred Hhh-cCCCchHHHH---HHHHHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHHhhhh-----cccceeeccCcccccchh
Confidence 012 4556776664 788889888864 34 557888999999999999886310 001 3444432100
Q ss_pred ----------------------CcccEEEEEeec--CCCC----CcCHHHHHHHHHhCCcEeccccccCcccccchHHHH
Q 037063 471 ----------------------DRGPSLAFNVFD--WNGT----RIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQER 522 (588)
Q Consensus 471 ----------------------~rg~iv~f~~~~--~~g~----~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~ 522 (588)
....=+++.+.+ .+|. .++...+.+.|+++||.+--..
T Consensus 464 ~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d-------------- 529 (715)
T 3n75_A 464 CWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTG-------------- 529 (715)
T ss_dssp CEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEE--------------
T ss_pred hhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccCCCcHHHHHHHHHHCCCEEEecC--------------
Confidence 001123444432 2232 4778889999999999764221
Q ss_pred HHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhh
Q 037063 523 VRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 523 ~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~ 567 (588)
...|=+=+...+|.+++++|+++|.+|-+
T Consensus 530 ----------------~~~vl~l~s~g~~~~~~~~L~~aL~~~~~ 558 (715)
T 3n75_A 530 ----------------PYNLLFLFSIGIDKTKALSLLRALTDFKR 558 (715)
T ss_dssp ----------------TTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred ----------------CCcEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 11555556677899999999999998754
No 207
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.77 E-value=8e-17 Score=174.33 Aligned_cols=354 Identities=12% Similarity=0.017 Sum_probs=209.0
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+.-|||..+. |.-++.+++++.+.+.......+ .. .+ ..+...+
T Consensus 49 ~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-----------------------~~----~~--~~~~~~~ 99 (460)
T 3gju_A 49 NGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHA-----------------------YV----GH--GTEASIT 99 (460)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCC-----------------------CT----TC--CCHHHHH
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcccccc-----------------------cc----cc--CCHHHHH
Confidence 56789998754 45578888887665532111000 00 00 1356678
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC--------CCCeEE-EcCCCchhHHHHHHHHH---------H
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY--------SNPRLL-TVYDHENEAAALMIESS---------K 245 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~--------~gd~ll-~~~e~~s~~~~~~~~~a---------~ 245 (588)
++++++++++.+.+ .|+||+|+++|+.+++..+ .+ .+++|+ ....||......+ ... .
T Consensus 100 la~~l~~~~~~~~~--~v~~~~gGseA~~~al~~~-~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~-~~~~~~~~~~~~~ 175 (460)
T 3gju_A 100 LAKMIIDRAPKGMS--RVYFGLSGSDANETNIKLI-WYYNNVLGRPEKKKIISRWRGYHGSGVMTG-SLTGLDLFHNAFD 175 (460)
T ss_dssp HHHHHHHHSCTTEE--EEEEESSHHHHHHHHHHHH-HHHHHHTTCTTCCEEEEETTCCCCSSHHHH-HHCCCGGGTTTTT
T ss_pred HHHHHHhhCCCCcC--EEEEeCchHHHHHHHHHHH-HHHHHhcCCCCCCEEEEECCCcCCCCHHHh-hccCCcccccccC
Confidence 99999999876654 4999999999999988876 32 346655 4556665332221 110 0
Q ss_pred hcCCEEEEEeccC----CCCccC--------HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHH
Q 037063 246 KRGARVSSAEFAW----PNLRIH--------SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVA 308 (588)
Q Consensus 246 ~~G~~v~~v~~~~----~~~~i~--------~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a 308 (588)
..+..+..++... ++..++ .++|+++|.+ ...+++++|++..+++++|.+.+ +++| ++|
T Consensus 176 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~----~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~ 251 (460)
T 3gju_A 176 LPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILA----EGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVL 251 (460)
T ss_dssp CSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHH----HCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHH
T ss_pred CCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHh----cCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHH
Confidence 1122455565431 111122 5788888862 11246889999999999999887 8999 999
Q ss_pred HHcCcEEEEeCCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCC-CceEEEEEeCcchhcccCCCCCCCceEeeecC
Q 037063 309 AEKGWHVLLDATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENP-SGFGCLFVKKSSASVLSGSTSSVSTIMGIEPS 384 (588)
Q Consensus 309 ~~~g~~vvvDaa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P-~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~ 384 (588)
+++|+++|+|.++. ++.. ..........+|++++ .|.+|. + ..+|++++++++++.+....... .
T Consensus 252 ~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~--sK~l~g-G~~~lg~v~~~~~i~~~~~~~~~~~-~------- 320 (460)
T 3gju_A 252 KKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLITI--AKGLTS-AYAPLSGVIVADRVWQVLVQGSDKL-G------- 320 (460)
T ss_dssp HHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEE--CGGGTT-TSSCCEEEEEEHHHHHHHHHHHHHH-C-------
T ss_pred HHcCCEEEEeccccCCCcccccchHhhcCCCCCeeee--ehhhcC-CCCCeEEEEECHHHHHHHhcccccc-c-------
Confidence 99999999999966 3211 1101111223787754 597763 3 46799999999887764210000 0
Q ss_pred CCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEE
Q 037063 385 FSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALG-LILISNRARYLINWLANALMNLHHPHSETGIPLVRI 463 (588)
Q Consensus 385 ~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G-~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i 463 (588)
.+...+|.+...+ ..++..++|+.++..+ ++++.+....+.+.|.+.+.+ .+.+..
T Consensus 321 -------------~~~~~~t~~~~~~-~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---------~~~~~~ 377 (460)
T 3gju_A 321 -------------SLGHGWTYSAHPI-CVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGG---------HKNVGE 377 (460)
T ss_dssp -------------SCSCCCTTTTCHH-HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTT---------STTEEE
T ss_pred -------------ccccCCCCCCCHH-HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc---------CCCeEE
Confidence 0000111211111 1244456777665432 233444444444444444443 234433
Q ss_pred eCCCCCCCcccEEEEEeecCCCC--Cc-----CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCc
Q 037063 464 YGPKVMFDRGPSLAFNVFDWNGT--RI-----DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETR 536 (588)
Q Consensus 464 ~~p~~~~~rg~iv~f~~~~~~g~--~i-----~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~ 536 (588)
+. ..|.++.+.+.+.... .+ ....+.+.|.++||.++++.
T Consensus 378 ~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---------------------------- 424 (460)
T 3gju_A 378 VR-----GDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP---------------------------- 424 (460)
T ss_dssp EE-----EETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS----------------------------
T ss_pred Ee-----eeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC----------------------------
Confidence 32 2467777776532111 01 13456677777899987641
Q ss_pred CCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 537 SGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 537 ~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+..+||+++++..|.||++++++.|++++++
T Consensus 425 -~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 455 (460)
T 3gju_A 425 -QGDILGFAPPLCLTREQADIVVSKTADAVKS 455 (460)
T ss_dssp -SSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 0128999999999999999999999998875
No 208
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.77 E-value=3.5e-17 Score=177.14 Aligned_cols=345 Identities=12% Similarity=0.040 Sum_probs=218.6
Q ss_pred CCe--eeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 110 NNY--VCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 110 ~~~--vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
++. -|||..+. |.-++.+.+++.+.+.... +.+ . +....+..
T Consensus 71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~----~~~--------------------~------~~~~~~~~ 120 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMN----HVM--------------------F------GGLTHEPA 120 (457)
T ss_dssp TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCS----CCC--------------------S------SSEECHHH
T ss_pred CCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhcc----Ccc--------------------c------cccCCHHH
Confidence 566 89998763 5568888888866653311 100 0 00114566
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC-------CCC-eEE-EcCCCchhHHHHHH---------HH
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY-------SNP-RLL-TVYDHENEAAALMI---------ES 243 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~-------~gd-~ll-~~~e~~s~~~~~~~---------~~ 243 (588)
.+++++++++++.+.+ .|+||+|+++|+.+++..+ .+ +|+ +|+ ....||......+. ..
T Consensus 121 ~~L~e~la~~~~~~~~--~v~~~~sGseA~~~Alk~a-~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 197 (457)
T 3tfu_A 121 ARLAKLLVDITPAGLD--TVFFSDSGSVSVEVAAKMA-LQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSL 197 (457)
T ss_dssp HHHHHHHHHHSSTTEE--EEEEESSHHHHHHHHHHHH-HHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC------
T ss_pred HHHHHHHHHhCCCCcC--EEEEeCcHHHHHHHHHHHH-HHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCccccccc
Confidence 7999999999987654 4999999999999988776 32 555 555 45566653322110 00
Q ss_pred HHhcCCEEEEEeccCC-CCccCHHHHHHHHhhhccccCCCcceEEEEeC-CCCCCCccCC----HHHH-HHHHHcCcEEE
Q 037063 244 SKKRGARVSSAEFAWP-NLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPL-QSKVTGARYS----YMWM-SVAAEKGWHVL 316 (588)
Q Consensus 244 a~~~G~~v~~v~~~~~-~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~-~sn~tG~~~p----l~~I-~~a~~~g~~vv 316 (588)
.......+..++.... ....|.++|+++|++. .+++++|++.. ++|++|.+.| +++| ++|+++|+++|
T Consensus 198 ~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~-----~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI 272 (457)
T 3tfu_A 198 WTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQH-----AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLI 272 (457)
T ss_dssp ----CCCCEEECCCCSSCCHHHHHHHHHHHHHH-----GGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEE
T ss_pred ccCCCCCceEecCCCcccCHHHHHHHHHHHHhC-----CCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 0111223444444211 1224778899888721 14688999999 9999999998 8889 99999999999
Q ss_pred EeCCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCC-CceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccc
Q 037063 317 LDATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENP-SGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELE 392 (588)
Q Consensus 317 vDaa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P-~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~ 392 (588)
+|+++. ++.. ...++.....+|++ ++.|.+|. + .++|++++++++++.+.....+
T Consensus 273 ~DEv~~g~gr~G~~~a~~~~~~~pdii--t~sK~l~g-G~~~lG~v~~~~~i~~~~~~~~~~------------------ 331 (457)
T 3tfu_A 273 FDEIATGFGRTGALFAADHAGVSPDIM--CVGKALTG-GYLSLAATLCTADVAHTISAGAAG------------------ 331 (457)
T ss_dssp EECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGT-TSSCCEEEEEEHHHHHHHHHSSSC------------------
T ss_pred EEcCccCCccccchhHhHhcCCCceEE--EEChhhhC-CCcceEEEEEcHHHHHHhhccCCC------------------
Confidence 999965 2210 11111112348877 66796662 3 3689999999988766311000
Q ss_pred cccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCc
Q 037063 393 TLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDR 472 (588)
Q Consensus 393 ~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~r 472 (588)
.|...+|.+...+ ..++..++|+.+.+ +.+.++++.+.+++++.|.++. ..+.+..+. ..
T Consensus 332 -----~~~~~~t~~~n~~-a~aaa~aaL~~~~~---~~~~~~~~~~~~~l~~~L~~l~------~~~~v~~vr-----~~ 391 (457)
T 3tfu_A 332 -----ALMHGPTFMANPL-ACAVSVASVELLLG---QDWRTRITELAAGLTAGLDTAR------ALPAVTDVR-----VC 391 (457)
T ss_dssp -----SCCCCCTTTTCHH-HHHHHHHHHHHHHT---SCHHHHHHHHHHHHHHHHGGGG------GSTTEEEEE-----EC
T ss_pred -----ceeEecCCCcCHH-HHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHh------cCCCeeeee-----cC
Confidence 0001112211111 12344466666654 4567888888899999998863 123443221 24
Q ss_pred ccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCH
Q 037063 473 GPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNF 552 (588)
Q Consensus 473 g~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~ 552 (588)
|.++.+.+.+. .+...+.+.|.++||.+++. . ..||+++.+..|.
T Consensus 392 G~~~~i~l~~~----~~~~~~~~~l~~~Gv~v~~~-----------------------------~--~~lRi~p~~~~t~ 436 (457)
T 3tfu_A 392 GAIGVIECDRP----VDLAVATPAALDRGVWLRPF-----------------------------R--NLVYAMPPYICTP 436 (457)
T ss_dssp SSCEEEEESSC----CCHHHHHHHHHHTTEECCCB-----------------------------T--TEEEECCCTTCCH
T ss_pred CeEEEEEECCc----ccHHHHHHHHHHCCeEEEec-----------------------------C--CEEEEECCCCCCH
Confidence 67888877642 34667777777789998752 1 1899999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 037063 553 EDTYRLWAFVSRFLDA 568 (588)
Q Consensus 553 eDv~~li~~l~~~l~~ 568 (588)
|||+++++.|++++++
T Consensus 437 eei~~~l~~L~~~l~~ 452 (457)
T 3tfu_A 437 AEITQITSAMVEVARL 452 (457)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998865
No 209
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.76 E-value=2.8e-17 Score=175.70 Aligned_cols=175 Identities=13% Similarity=0.042 Sum_probs=138.0
Q ss_pred HHHHHHHHHHHhCCCCCCceEEE--ecCHHHHHHHHHHhCCCCCCCeEEEcC--CCchhHHHHH-------HHHHHhcCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVF--TANQSSAFKLLAESYPFYSNPRLLTVY--DHENEAAALM-------IESSKKRGA 249 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvf--t~g~T~al~lv~~s~~~~~gd~ll~~~--e~~s~~~~~~-------~~~a~~~G~ 249 (588)
.+++++++|+++|++ ..+++ ++|+|+|+.+++.++ +++||+|++.. .|.. ....+ ...++..|+
T Consensus 75 ~~~Le~~lA~l~g~e---~alv~p~~~sGt~Ai~~al~al-l~pGD~Vl~~~~~~y~~-~~~~~g~~~~~~~~~l~~~G~ 149 (427)
T 3i16_A 75 RDSLDAVYARVFNTE---SALVRPHFVNGTHALGAALFGN-LRPGNTMLSVCGEPYDT-LHDVIGITENSNMGSLKEFGI 149 (427)
T ss_dssp HHHHHHHHHHHHTCS---EEEEETTCCSHHHHHHHHHHHH-CCTTCEEEESSSSCCGG-GHHHHTCSCCCSSCCTGGGTC
T ss_pred HHHHHHHHHHHhCCc---ceEEeCCCccHHHHHHHHHHHH-hCCCCEEEEeCCCccHH-HHHHHhccccchHHHHHHcCC
Confidence 678889999999995 34666 889999999999998 89999987654 4443 33221 034466799
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeC----CCCCCCccCCHHHH-HHHHH--cCcEEEEeCCCc
Q 037063 250 RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPL----QSKVTGARYSYMWM-SVAAE--KGWHVLLDATAL 322 (588)
Q Consensus 250 ~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~----~sn~tG~~~pl~~I-~~a~~--~g~~vvvDaa~~ 322 (588)
+++.++.+ +++.+|.++|++++++ .+++++|++.+ ++|++|.+.|+++| ++|++ +|+++++|+++.
T Consensus 150 ~~~~v~~~-~~g~~D~e~l~~~l~~------~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~ 222 (427)
T 3i16_A 150 NYKQVDLK-EDGKPNLEEIEKVLKE------DESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYG 222 (427)
T ss_dssp EEEECCCC-TTSSCCHHHHHHHHHT------CTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTT
T ss_pred EEEEecCc-cCCCcCHHHHHHHhhC------CCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCc
Confidence 99999987 6788999999999971 14799999999 99999999999999 99999 999999999987
Q ss_pred CCC-CCCCCCCCCCCCcEEEeccCccCCCCC-CceEEEEEeCcchhcccC
Q 037063 323 GSK-DMDTLGLSLFKPDFLICSFYKIFGENP-SGFGCLFVKKSSASVLSG 370 (588)
Q Consensus 323 ~~~-d~~~l~l~~~~~D~vv~S~~K~~G~~P-~G~G~L~v~~~~~~~l~~ 370 (588)
.+. ...++. .++|+++.|+||.+|.+. ...|+++.+++++++++.
T Consensus 223 ~~~~~~~p~~---~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~ 269 (427)
T 3i16_A 223 EFMDTKEPTD---VGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSY 269 (427)
T ss_dssp TTSSSSCGGG---GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHH
T ss_pred cccccCCccc---cCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHH
Confidence 763 223322 348999999999888210 335999999998887754
No 210
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.76 E-value=3.8e-16 Score=168.36 Aligned_cols=349 Identities=11% Similarity=0.030 Sum_probs=205.3
Q ss_pred CCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|||..+ .|.-++.+.+++.+.+.......+ . + ...+...+
T Consensus 42 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~------------------------~-----~-~~~~~~~~ 91 (448)
T 3dod_A 42 NGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTL------------------------L-----G-MTNVPATQ 91 (448)
T ss_dssp TSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCCC------------------------S-----S-SEEHHHHH
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccc------------------------c-----c-cCCHHHHH
Confidence 5678999876 345578889888766533111000 0 0 01456678
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC----CC----CeEE-EcCCCchhHHHHHHHHHHh--------
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY----SN----PRLL-TVYDHENEAAALMIESSKK-------- 246 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~----~g----d~ll-~~~e~~s~~~~~~~~~a~~-------- 246 (588)
++++++++++...+ .|+||+|+|+|+.+++..+ .+ +| ++|+ ....||......+ .....
T Consensus 92 la~~l~~~~~~~~~--~v~~~~sGseA~~~al~~~-~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~-~~~~~~~~~~~~~ 167 (448)
T 3dod_A 92 LAETLIDISPKKLT--RVFYSDSGAEAMEIALKMA-FQYWKNIGKPEKQKFIAMKNGYHGDTIGAV-SVGSIELFHHVYG 167 (448)
T ss_dssp HHHHHHHHSCTTEE--EEEEESSHHHHHHHHHHHH-HHHHHHTTCTTCCEEEEEC-------------------------
T ss_pred HHHHHHHhCCCCCC--EEEEeCchHHHHHHHHHHH-HHHHHhhCCCCCCEEEEECCCCCCccHHHH-HhcCCcccccccc
Confidence 99999999976544 4999999999999988776 33 44 7765 4455554222111 11000
Q ss_pred -cCCEEEEEeccCCCCc-----------cCHHHHHHHHhhhccccCCCcceEEEEeCCC-CCCCccCC----HHHH-HHH
Q 037063 247 -RGARVSSAEFAWPNLR-----------IHSGKLMKKIVGKRKKKKKKKRGLFVFPLQS-KVTGARYS----YMWM-SVA 308 (588)
Q Consensus 247 -~G~~v~~v~~~~~~~~-----------i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~s-n~tG~~~p----l~~I-~~a 308 (588)
....+..++.. ...+ .|.++|+++|.. ..+++++|++..++ +++|.+.| +++| ++|
T Consensus 168 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~ 241 (448)
T 3dod_A 168 PLMFESYKAPIP-YVYRSESGDPDECRDQCLRELAQLLEE-----HHEEIAALSIESMVQGASGMIVMPEGYLAGVRELC 241 (448)
T ss_dssp -----CEEECCC-CCTTSSSCCHHHHHHHHHHHHHHHHHH-----HGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHH
T ss_pred CCCCCceEeCCC-ccccCCccchhhhhHHHHHHHHHHHHh-----CCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHH
Confidence 01223444442 1111 247889888862 01467888888887 99998887 8999 999
Q ss_pred HHcCcEEEEeCCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCC-CceEEEEEeCcchhcccCCCCCCCceEeeecC
Q 037063 309 AEKGWHVLLDATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENP-SGFGCLFVKKSSASVLSGSTSSVSTIMGIEPS 384 (588)
Q Consensus 309 ~~~g~~vvvDaa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P-~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~ 384 (588)
+++|+++|+|.++. ++.. ..........+|+++ +.|.+|. + ..+|++++++++++.+....... +
T Consensus 242 ~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t--~sK~l~~-G~~~ig~v~~~~~~~~~~~~~~~~~-~------- 310 (448)
T 3dod_A 242 TTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMA--AGKGITG-GYLPIAVTFATEDIYKAFYDDYENL-K------- 310 (448)
T ss_dssp HHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEE--ECGGGGT-TSSCCEEEEEEHHHHHTTCSCGGGC-C-------
T ss_pred HHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEE--ecccccC-CcCceEEEEECHHHHHHhhhccccC-C-------
Confidence 99999999999865 2211 101111123378765 4597773 4 36799999999888776521000 0
Q ss_pred CCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEe
Q 037063 385 FSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIY 464 (588)
Q Consensus 385 ~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~ 464 (588)
.+...+|.+...+ ..++..++|+.++. +.+.++++++.+++++.|.++. +.+.+...
T Consensus 311 -------------~~~~~~t~~~~~~-~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~l~------~~~~~~~~ 367 (448)
T 3dod_A 311 -------------TFFHGHSYTGNQL-GCAVALENLALFES---ENIVEQVAEKSKKLHFLLQDLH------ALPHVGDI 367 (448)
T ss_dssp -------------CCCCCCTTTTCHH-HHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHT------TSTTEEEE
T ss_pred -------------cccccCCCCcCHH-HHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHh------cCCCeEEE
Confidence 0001122222222 12444567776654 3455566666666666665531 12333322
Q ss_pred CCCCCCCcccEEEEEeecCCCCC--cC-----HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcC
Q 037063 465 GPKVMFDRGPSLAFNVFDWNGTR--ID-----PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRS 537 (588)
Q Consensus 465 ~p~~~~~rg~iv~f~~~~~~g~~--i~-----~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~ 537 (588)
. ..|.++.+.+.+..... .. ...+.+.|.++||.++++ .
T Consensus 368 ~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------------------------~ 413 (448)
T 3dod_A 368 R-----QLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPL-----------------------------G 413 (448)
T ss_dssp E-----EETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEE-----------------------------T
T ss_pred E-----eeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEecc-----------------------------C
Confidence 1 24667777775421110 00 245666677789998764 1
Q ss_pred CccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 538 GVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 538 g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
..||+++++..|.|||+++++.|++++++
T Consensus 414 --~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 442 (448)
T 3dod_A 414 --DVIAFLPPLASTAEELSEMVAIMKQAIHE 442 (448)
T ss_dssp --TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred --CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 28999999999999999999999998865
No 211
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.76 E-value=3.2e-17 Score=174.38 Aligned_cols=290 Identities=12% Similarity=0.052 Sum_probs=184.2
Q ss_pred HHHHHHHHHHh-CCC-----CCCceE--EEecCHHHHHHHH---HHhCCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCE
Q 037063 182 SKIRKRIMDFM-NIS-----EDDYTL--VFTANQSSAFKLL---AESYPFYSNPRLLTVYDHENEAAALMIESSKKRGAR 250 (588)
Q Consensus 182 ~~~r~~ia~~l-ga~-----~~e~~v--vft~g~T~al~lv---~~s~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~ 250 (588)
.++|+.|++++ +.. +++ | +.|.++++++.++ +.++ .++||+|++....+... ...++..|++
T Consensus 82 ~~lr~~ia~~~~~~~~~~~~~~~--i~~~~~~~g~ga~~~~~~~~~~~-~~~gd~Vlv~~p~y~~~----~~~~~~~g~~ 154 (409)
T 4eu1_A 82 ASFVEEAQKLCFGPTCAALRDGR--IASCQTLGGTGALRIGGDLLNRF-VANCNRIYGPDVGYPNH----ESIFAKAGME 154 (409)
T ss_dssp HHHHHHHHHHHHCSSCHHHHTTC--EEEEEESHHHHHHHHHHHHGGGT-SSSCCEEEEESSCCTHH----HHHHHHTTCE
T ss_pred HHHHHHHHHHHcCCCchhhccCc--eeeeecccchHHHHHHHHHHHHh-cCCCCEEEEeCCCcHhH----HHHHHHcCCe
Confidence 47888888876 664 444 6 4599999999875 4455 67899977655444322 3455678999
Q ss_pred EEEEecc-CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCCcC-C
Q 037063 251 VSSAEFA-WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATALG-S 324 (588)
Q Consensus 251 v~~v~~~-~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~~-~ 324 (588)
++.++++ ..++.+|+++|++.+++ ..+++++++++.++||||..+|.++ | ++|+++|+++|+|.+... .
T Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~ 229 (409)
T 4eu1_A 155 LTPYSYYDPATKGLNLAGMLECLDK-----APEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFA 229 (409)
T ss_dssp EEEECCEETTTTEECHHHHHHHHHH-----SCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTT
T ss_pred EEEEEeecCcCCcCcHHHHHHHHHh-----CCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccc
Confidence 9999983 24567999999999962 1145788888999999999999776 6 889999999999998432 2
Q ss_pred CCC-----CCC-CC-CCCCCcEEEeccCccCCCCCCceEEE--EEeC-c----chhcccCCCCCCCceEeeecCCCcccc
Q 037063 325 KDM-----DTL-GL-SLFKPDFLICSFYKIFGENPSGFGCL--FVKK-S----SASVLSGSTSSVSTIMGIEPSFSEIIE 390 (588)
Q Consensus 325 ~d~-----~~l-~l-~~~~~D~vv~S~~K~~G~~P~G~G~L--~v~~-~----~~~~l~~~~~g~~g~v~~~~~~~~~~~ 390 (588)
..- ..+ .+ ......+++.|++|.||.+..++|++ ++.+ + +++.+...... +
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~--~------------- 294 (409)
T 4eu1_A 230 TGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRP--M------------- 294 (409)
T ss_dssp TSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHH--H-------------
T ss_pred cCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhh--h-------------
Confidence 100 000 00 11123477889999998423347887 5544 4 33333221100 0
Q ss_pred cccccccccccCCCCCccchhhHHHHHHHHHHHH-----HhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCe-EEEe
Q 037063 391 LETLDESSQSKFPESSISGVSSKLVECKGLDHAD-----ALGLILISNRARYLINWLANALMNLHHPHSETGIPL-VRIY 464 (588)
Q Consensus 391 ~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~-----~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~-v~i~ 464 (588)
..+++.+.+ .++..+|+... ...++++.++.++.++++.+.|.++ |.+. ++++
T Consensus 295 ----------~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~~ 353 (409)
T 4eu1_A 295 ----------YNNPPLYGA----WVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKAC-------GSVHDWSHI 353 (409)
T ss_dssp ----------HSSCCHHHH----HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------TCCSCCHHH
T ss_pred ----------cCCCChHHH----HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCCCccee
Confidence 001111111 23334444210 1125677888888999999999885 2221 3333
Q ss_pred CCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEE
Q 037063 465 GPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTA 544 (588)
Q Consensus 465 ~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRv 544 (588)
.| .++++.| .+ ++.+.+.++++++||.+.+| .|+
T Consensus 354 ~~-----~~~~~~~--~~-----~~~~~~~~ll~~~gv~v~p~----------------------------------~Ri 387 (409)
T 4eu1_A 354 ER-----QVGMMAY--TG-----LTREQVELLRSEYHIYMTLN----------------------------------GRA 387 (409)
T ss_dssp HH-----SCSSEEE--CC-----CCHHHHHHHHHHHCEECCTT----------------------------------CEE
T ss_pred cC-----CceEEEE--eC-----CCHHHHHHHHHcCCEEEcCC----------------------------------CEE
Confidence 22 3455444 22 34666778888889987643 478
Q ss_pred ecCCCCCHHHHHHHHHHHHHhh
Q 037063 545 ALGCLTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 545 Slg~~~t~eDv~~li~~l~~~l 566 (588)
|++..+ .+||+++++.|++++
T Consensus 388 ~~~~~~-~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 388 AVSGLN-STNVEYVSQAIHNVT 408 (409)
T ss_dssp EGGGCC-TTTHHHHHHHHHHHH
T ss_pred EEEecC-HhhHHHHHHHHHHHh
Confidence 887654 467999999998865
No 212
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.75 E-value=2.6e-16 Score=170.96 Aligned_cols=348 Identities=9% Similarity=0.017 Sum_probs=216.2
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+.-|||..+. |.-++.+++++.+.+.......+ .. . ...+...+
T Consensus 53 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-----------------------~~-~-----~~~~~~~~ 103 (472)
T 3hmu_A 53 EGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNT-----------------------FF-K-----TTHVPAIA 103 (472)
T ss_dssp TCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCS-----------------------SS-S-----EECHHHHH
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhcccccc-----------------------cc-c-----cCCHHHHH
Confidence 67789998763 55678899988766643111000 00 0 01456678
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC--------CCCeEE-EcCCCchhHHHHHHHHH------Hh--
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY--------SNPRLL-TVYDHENEAAALMIESS------KK-- 246 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~--------~gd~ll-~~~e~~s~~~~~~~~~a------~~-- 246 (588)
+.++++++++.+.+ .|+|++|+++|+..++..+ .+ .+++|+ ....||......+ ... +.
T Consensus 104 lae~l~~~~~~~~~--~v~~~~sGseA~~~aik~a-~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~-~~~~~~~~~~~~~ 179 (472)
T 3hmu_A 104 LAQKLAELAPGDLN--HVFFAGGGSEANDTNIRMV-RTYWQNKGQPEKTVIISRKNAYHGSTVASS-ALGGMAGMHAQSG 179 (472)
T ss_dssp HHHHHHHHSCTTEE--EEEEESSHHHHHHHHHHHH-HHHHHHTTCTTCCEEEEETTCCCCSSHHHH-HHSCCHHHHHTTC
T ss_pred HHHHHHHhCCCCCC--EEEEeCCHHHHHHHHHHHH-HHHHHhcCCCCCCEEEEEcCcCCCccHHhh-hccCChhhccccC
Confidence 99999999876544 4999999999999888876 32 345555 5556665332221 110 00
Q ss_pred cCCEEEEEeccC----CCCccC--------HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHH
Q 037063 247 RGARVSSAEFAW----PNLRIH--------SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAA 309 (588)
Q Consensus 247 ~G~~v~~v~~~~----~~~~i~--------~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~ 309 (588)
....+..++... .+. .+ .++|+++|++ ...+++.+|++..+++.+|.+.| +++| ++|+
T Consensus 180 ~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~----~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~ 254 (472)
T 3hmu_A 180 LIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILE----LGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICD 254 (472)
T ss_dssp CCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHH----HCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHH
T ss_pred CCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHh----cCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHH
Confidence 111345555421 111 23 6788888862 11246889999999999999998 9999 9999
Q ss_pred HcCcEEEEeCCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCC
Q 037063 310 EKGWHVLLDATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFS 386 (588)
Q Consensus 310 ~~g~~vvvDaa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~ 386 (588)
++|+++|+|.++. ++.. ..........+|++++| |.+|.+-..+|++++++++++.+.+....
T Consensus 255 ~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~s--K~l~gg~~plG~v~~~~~i~~~~~~~~~~------------ 320 (472)
T 3hmu_A 255 KYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMTIA--KGLSSGYAPIGGSIVCDEVAHVIGKDEFN------------ 320 (472)
T ss_dssp HTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEEC--GGGTTTSSCCEEEEEEHHHHHHHTTSCBC------------
T ss_pred HcCCEEEEEccccCCcccCccchhHHhCCCCceeeec--hhhhcCCcceEEEEECHHHHHhcccCCcc------------
Confidence 9999999999976 3211 11000112348988654 97663113579999999988877321100
Q ss_pred cccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHH-HHHHHHHHHHHcccCCCCCCCCCeEEEeC
Q 037063 387 EIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRAR-YLINWLANALMNLHHPHSETGIPLVRIYG 465 (588)
Q Consensus 387 ~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~-~L~~~l~~~L~~L~h~~~~~g~~~v~i~~ 465 (588)
..+|.+...+ ..++..++|+.+++ +.+.++++ .+.+++++.|.+|.. .+.+..+.
T Consensus 321 --------------~~~t~~~np~-a~aAa~aaL~~~~~---~~~~~~~~~~~~~~l~~~L~~l~~------~~~v~~vr 376 (472)
T 3hmu_A 321 --------------HGYTYSGHPV-AAAVALENLRILEE---ENILDHVRNVAAPYLKEKWEALTD------HPLVGEAK 376 (472)
T ss_dssp --------------CCCTTTTCHH-HHHHHHHHHHHHHH---TTHHHHHHHTHHHHHHHHHHGGGG------STTEEEEE
T ss_pred --------------ccCCCCCCHH-HHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHhc------CCCeEEEE
Confidence 1112221211 12444566776654 45667777 778888888877621 23343332
Q ss_pred CCCCCCcccEEEEEeecCCC--CCc------CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcC
Q 037063 466 PKVMFDRGPSLAFNVFDWNG--TRI------DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRS 537 (588)
Q Consensus 466 p~~~~~rg~iv~f~~~~~~g--~~i------~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~ 537 (588)
..|.++.+.+..... ..+ ....+.+.|.++||.++++ .
T Consensus 377 -----~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-----------------------------g 422 (472)
T 3hmu_A 377 -----IVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHV-----------------------------G 422 (472)
T ss_dssp -----EETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEE-----------------------------T
T ss_pred -----ecCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEec-----------------------------C
Confidence 346787887753210 111 0345666677789988764 1
Q ss_pred CccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 538 GVSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 538 g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
.+||+++.+..|.|||+++++.|++++++.
T Consensus 423 --~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~ 452 (472)
T 3hmu_A 423 --DRMIISPPLVITPAEIDEMFVRIRKSLDEA 452 (472)
T ss_dssp --TEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred --CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 289999999999999999999999998763
No 213
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.74 E-value=3e-16 Score=170.66 Aligned_cols=352 Identities=10% Similarity=0.017 Sum_probs=216.6
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+.-|||..+. |.-++.+++++.+.+.....+.+ . . ...+...+
T Consensus 52 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~-----------------------~--~-----~~~~~~~~ 101 (476)
T 3i5t_A 52 DGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASP-----------------------W--Y-----MATSPAAR 101 (476)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCT-----------------------T--T-----CBCHHHHH
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCccc-----------------------C--c-----cCCHHHHH
Confidence 57789998654 55688999988766643111110 0 0 01456778
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC-------C-CCeEE-EcCCCchhHHHHHHHHHH---------
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY-------S-NPRLL-TVYDHENEAAALMIESSK--------- 245 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~-------~-gd~ll-~~~e~~s~~~~~~~~~a~--------- 245 (588)
+.++++++++.+.+ .|+|++|+++|+..++..+ .+ + +++|+ ....||......+ ....
T Consensus 102 la~~l~~~~~~~~~--~v~~~~sGseA~~~Aik~a-~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~-~~~~~~~~~~~~~ 177 (476)
T 3i5t_A 102 LAEKIATLTPGDLN--RIFFTTGGSTAVDSALRFS-EFYNNVLGRPQKKRIIVRYDGYHGSTALTA-ACTGRTGNWPNFD 177 (476)
T ss_dssp HHHHHHTTSSTTCC--EEEEESSHHHHHHHHHHHH-HHHHHHTTCTTCCEEEEETTCCCCSSHHHH-HTCCCGGGCTTSC
T ss_pred HHHHHHhcCCCCcC--EEEEeCchHHHHHHHHHHH-HHHHHhcCCCCCCEEEEEcCCcCcCChhhc-cccCChhhccccC
Confidence 99999999876554 4999999999999888776 22 3 34555 5556665332221 1100
Q ss_pred hcCCEEEEEeccC--CCCccC--------HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHH
Q 037063 246 KRGARVSSAEFAW--PNLRIH--------SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAE 310 (588)
Q Consensus 246 ~~G~~v~~v~~~~--~~~~i~--------~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~ 310 (588)
.....+..++... .....+ .++|+++|.+ ...+++++|++..+++++|.+.+ +++| ++|++
T Consensus 178 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~----~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~ 253 (476)
T 3i5t_A 178 IAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIES----LGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEK 253 (476)
T ss_dssp CCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHH----HCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHH
T ss_pred CCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHh----cCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHH
Confidence 0011234444321 000111 6788888862 11246789999999999998777 8999 99999
Q ss_pred cCcEEEEeCCCc-CCCC--CCCCC-CCCCCCcEEEeccCccCCCCC-CceEEEEEeCcchhcccCCCCCCCceEeeecCC
Q 037063 311 KGWHVLLDATAL-GSKD--MDTLG-LSLFKPDFLICSFYKIFGENP-SGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSF 385 (588)
Q Consensus 311 ~g~~vvvDaa~~-~~~d--~~~l~-l~~~~~D~vv~S~~K~~G~~P-~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~ 385 (588)
+|+++|+|.++. ++.. .-... .....+|++++| |.+|. + ..+|++++++++++.+.+..... +
T Consensus 254 ~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~s--K~l~~-G~~plg~v~~~~~i~~~~~~~~~~~-~-------- 321 (476)
T 3i5t_A 254 HDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFA--KGVTS-GYVPLGGLAISEAVLARISGENAKG-S-------- 321 (476)
T ss_dssp TTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEEC--GGGGT-TSSCCEEEEECHHHHHTTSGGGCTT-C--------
T ss_pred cCCEEEEEecccCCccccCceeeecccCCCcchhhhh--hhhcC-CCcCeEEEEECHHHHHHHhcCCccc-c--------
Confidence 999999999976 3211 10011 112348987654 97763 3 46799999998887765421000 0
Q ss_pred CcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeC
Q 037063 386 SEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYG 465 (588)
Q Consensus 386 ~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~ 465 (588)
.|...+|.+...+ ..++..++|+.+++ +.+.++++.+.+++++.|..|. ..+.+..+.
T Consensus 322 ------------~~~~~~t~~~np~-a~aAa~aaL~~~~~---~~~~~~~~~~~~~l~~~L~~l~------~~~~v~~v~ 379 (476)
T 3i5t_A 322 ------------WFTNGYTYSNQPV-ACAAALANIELMER---EGIVDQAREMADYFAAALASLR------DLPGVAETR 379 (476)
T ss_dssp ------------EECCCCTTTTCHH-HHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHTTT------TSTTEEEEE
T ss_pred ------------cccccCCCCcCHH-HHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHh------cCCCeEEEE
Confidence 0001122222222 12444566776654 4577888888888988888763 124444332
Q ss_pred CCCCCCcccEEEEEeecCCCC--Cc-----CHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCC
Q 037063 466 PKVMFDRGPSLAFNVFDWNGT--RI-----DPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSG 538 (588)
Q Consensus 466 p~~~~~rg~iv~f~~~~~~g~--~i-----~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g 538 (588)
..|.++.+.+.+.... .+ ....+.+.|.++||.+++. .
T Consensus 380 -----~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-----------------------------g- 424 (476)
T 3i5t_A 380 -----SVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPL-----------------------------G- 424 (476)
T ss_dssp -----EETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEE-----------------------------T-
T ss_pred -----ecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEec-----------------------------C-
Confidence 3467777777542111 11 1334666666789988752 1
Q ss_pred ccEEEEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 539 VSVVTAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 539 ~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
..||+++.+..+.+||+++++.|++++++.
T Consensus 425 -~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~ 454 (476)
T 3i5t_A 425 -DLCVISPPLIISRAQIDEMVAIMRQAITEV 454 (476)
T ss_dssp -TEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred -CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 289999999999999999999999988753
No 214
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.74 E-value=2.2e-16 Score=168.76 Aligned_cols=174 Identities=10% Similarity=0.079 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHhCCCCCCceEEE--ecCHHHHHHHHHHhCCCCCCCeEEEcC--CCchhHHHHH-------HHHHHhcCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVF--TANQSSAFKLLAESYPFYSNPRLLTVY--DHENEAAALM-------IESSKKRGA 249 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvf--t~g~T~al~lv~~s~~~~~gd~ll~~~--e~~s~~~~~~-------~~~a~~~G~ 249 (588)
.+++++++++++|++ +.+++ ++|+|+|+.+++.++ +++||+|++.. .|+. ....+ ...++..|+
T Consensus 76 ~~~Le~~lA~l~g~e---~alv~p~~~sGt~A~~~al~al-l~pGD~Vl~~~~~~y~~-~~~~~g~~~~~~~~~l~~~G~ 150 (427)
T 3hvy_A 76 RDSLDRVYANIFNTE---SAFVRPHFVNGTHAIGAALFGN-LRPNDTMMSICGMPYDT-LHDIIGMDDSKKVGSLREYGV 150 (427)
T ss_dssp HHHHHHHHHHHHTCS---EEEEETTCCSHHHHHHHHHHHT-CCTTCEEEECSSSCCGG-GHHHHTCCTTCCSCCTGGGTC
T ss_pred HHHHHHHHHHHhCCC---ceEEeCCCCcHHHHHHHHHHHh-cCCCCEEEEeCCCCchh-HHHHhccccchhhhHHHHcCC
Confidence 678999999999985 33665 889999999999999 99999987654 4443 22221 033456799
Q ss_pred EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeC----CCCCCCccCCHHHH-HHHHH--cCcEEEEeCCCc
Q 037063 250 RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPL----QSKVTGARYSYMWM-SVAAE--KGWHVLLDATAL 322 (588)
Q Consensus 250 ~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~----~sn~tG~~~pl~~I-~~a~~--~g~~vvvDaa~~ 322 (588)
+++.++. +++.+|+++|++++++ .++|++|++.+ ++|+||.+.|+++| ++|++ +|+++++|+++.
T Consensus 151 ~~~~v~~--~~~~~d~e~l~~~i~~------~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~ 222 (427)
T 3hvy_A 151 KYKMVDL--KDGKVDINTVKEELKK------DDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYG 222 (427)
T ss_dssp EEEECCC--BTTBCCHHHHHHHHHH------CTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred EEEEecC--CCCCcCHHHHHHHhhC------CCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence 9999988 4678999999999972 14799999999 99999999999999 99999 899999999977
Q ss_pred CCC-CCCCCCCCCCCCcEEEeccCccCCCCC-CceEEEEEeCcchhcccC
Q 037063 323 GSK-DMDTLGLSLFKPDFLICSFYKIFGENP-SGFGCLFVKKSSASVLSG 370 (588)
Q Consensus 323 ~~~-d~~~l~l~~~~~D~vv~S~~K~~G~~P-~G~G~L~v~~~~~~~l~~ 370 (588)
.+. ...++. .++|+++.|+||.+|.+. ...|+++.++++++++..
T Consensus 223 ~~~~~~~p~~---~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~ 269 (427)
T 3hvy_A 223 EFVEEKEPTD---VGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATF 269 (427)
T ss_dssp TTTSSSCGGG---GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHH
T ss_pred ccccCCCCcc---cCCeEEEECCcccccccccceEEEEEECHHHHHHHHH
Confidence 663 233332 348999999999887210 234999999988887754
No 215
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.74 E-value=1.5e-16 Score=170.63 Aligned_cols=330 Identities=13% Similarity=0.047 Sum_probs=202.8
Q ss_pred CCeeeecCCCCC------CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGHG------LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~g------l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|||+.+.. ..++.+++++.+.+.... . ++. ..+...+
T Consensus 53 ~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~-----------------------------~~~-~~~~~~~ 99 (434)
T 3l44_A 53 DGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGV---L-----------------------------YGT-PTALEVK 99 (434)
T ss_dssp TCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCS---C-----------------------------CSS-CCHHHHH
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCc---C-----------------------------CCC-CCHHHHH
Confidence 577899987653 357888888866653210 0 000 1345568
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCC--CCCeEE-EcCCCchhHHHHHHHHHHhcCC-----------
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFY--SNPRLL-TVYDHENEAAALMIESSKKRGA----------- 249 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~--~gd~ll-~~~e~~s~~~~~~~~~a~~~G~----------- 249 (588)
++++++++++ +++ .|+||+|+|+|+.+++..+ .. ++++|+ ....||......+ ...|.
T Consensus 100 l~~~la~~~~-~~~--~v~~~~sGsea~~~ai~~a-~~~~~~~~vi~~~~~yhg~~~~~~----~~~g~~~~~~~~~~~~ 171 (434)
T 3l44_A 100 FAKMLKEAMP-ALD--KVRFVNSGTEAVMTTIRVA-RAYTGRTKIMKFAGCYHGHSDLVL----VAAGSGPSTLGTPDSA 171 (434)
T ss_dssp HHHHHHHHCT-TCS--EEEEESSHHHHHHHHHHHH-HHHHCCCEEEEETTCCCCSSGGGG----BC-------CCCBSST
T ss_pred HHHHHHHhCC-CCC--EEEEeCchHHHHHHHHHHH-HHhhCCCEEEEEcCccCCCcHHHH----hhcCCcccccCCCCcC
Confidence 8899999987 444 4999999999999988765 22 566765 4555554221110 01111
Q ss_pred --------EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEE
Q 037063 250 --------RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVL 316 (588)
Q Consensus 250 --------~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vv 316 (588)
.+..+|.+ |.++|+++|.+. .+++++|++..+++.+|.+.| +++| ++|+++|+++|
T Consensus 172 ~~~~~~~~~~~~~~~~------d~~~le~~l~~~-----~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI 240 (434)
T 3l44_A 172 GVPQSIAQEVITVPFN------NVETLKEALDKW-----GHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVI 240 (434)
T ss_dssp TCCHHHHTTEEEECTT------CHHHHHHHHHHH-----GGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEE
T ss_pred CCCCcCCCceEecCcc------cHHHHHHHHHhC-----CCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 22233221 788999988721 146789999999999999998 9999 99999999999
Q ss_pred EeCCCcC---CCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccc
Q 037063 317 LDATALG---SKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIEL 391 (588)
Q Consensus 317 vDaa~~~---~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~ 391 (588)
+|+++.. +.. ...++ ..+|++ ++.|.+|. +.++|++++++++++.+.+....
T Consensus 241 ~DEv~~g~~~g~~~~~~~~~---~~~di~--t~sK~~~~-G~~iG~~~~~~~i~~~~~~~~~~----------------- 297 (434)
T 3l44_A 241 YDEVITAFRFMYGGAQDLLG---VTPDLT--ALGKVIGG-GLPIGAYGGKKEIMEQVAPLGPA----------------- 297 (434)
T ss_dssp EECTTTTTTSSSSCHHHHHT---CCCSEE--EEEGGGGT-TSSCEEEEECHHHHTTBTTTSSB-----------------
T ss_pred EeccccceeccccHHHHHcC---CCCCee--ehhhhhcC-CcCeeeEEEcHHHHHhhccCCCc-----------------
Confidence 9999762 100 01112 237865 45697773 67899999999888776542100
Q ss_pred ccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCC
Q 037063 392 ETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFD 471 (588)
Q Consensus 392 ~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~ 471 (588)
+ ..+|.+...+ ..++..++|+.+.+ +.+.++++++.+++++.|.++... .+.+... ..
T Consensus 298 -------~-~~~t~~~~~~-a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~-----~~~~~~~-----~~ 355 (434)
T 3l44_A 298 -------Y-QAGTMAGNPA-SMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQAAK-----HNIDITL-----NR 355 (434)
T ss_dssp -------C-CCCTTTTCHH-HHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHH-----TTCCEEE-----EE
T ss_pred -------c-cCCCCCcCHH-HHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHh-----CCCCEEE-----Ee
Confidence 0 1112222221 12344456665543 455666667777777776653100 1111111 13
Q ss_pred cccEEEEEeecCCC---------CCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEE
Q 037063 472 RGPSLAFNVFDWNG---------TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVV 542 (588)
Q Consensus 472 rg~iv~f~~~~~~g---------~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~v 542 (588)
.+.++.+.+.+... .......+.+.|.++||.++.+.. ..+
T Consensus 356 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~------------------------------~~~ 405 (434)
T 3l44_A 356 LKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSKY------------------------------EAW 405 (434)
T ss_dssp ETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSSTT------------------------------CCE
T ss_pred eccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecCC------------------------------CcE
Confidence 46788887743110 001124566677778999886521 168
Q ss_pred EEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 543 TAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 543 RvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
|++ +..|.||++++++.|++++++
T Consensus 406 rl~--~~~t~e~i~~~l~~l~~~l~~ 429 (434)
T 3l44_A 406 FLT--TEHTKEDIEYTIEAVGRAFAA 429 (434)
T ss_dssp ECC--TTCCHHHHHHHHHHHHHHHHH
T ss_pred EEe--cccCHHHHHHHHHHHHHHHHH
Confidence 886 567999999999999998865
No 216
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.73 E-value=5.2e-17 Score=173.82 Aligned_cols=335 Identities=12% Similarity=0.070 Sum_probs=201.2
Q ss_pred CCeeeecCCCCC------CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGHG------LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~g------l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+.-|||..+.. ..++.+++++.+.+.... + | +. ..+...+
T Consensus 50 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~----~-------------~---------------~~-~~~~~~~ 96 (427)
T 3fq8_A 50 DGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGT----S-------------F---------------GA-PCALENV 96 (427)
T ss_dssp TSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCS----C-------------C---------------SS-CCHHHHH
T ss_pred CCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCC----C-------------c---------------CC-CCHHHHH
Confidence 567899987653 348888888866653210 0 0 00 1456678
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEE-EcCCCchhHHHHH-------HHH--HHhcC----
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLL-TVYDHENEAAALM-------IES--SKKRG---- 248 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll-~~~e~~s~~~~~~-------~~~--a~~~G---- 248 (588)
++++++++++ +++ .|+||+|+|+|+.+++.... +..+++|+ ....||......+ ... ....|
T Consensus 97 la~~l~~~~~-~~~--~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (427)
T 3fq8_A 97 LAEMVNDAVP-SIE--MVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKK 173 (427)
T ss_dssp HHHHHHHHST-TCS--EEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHH
T ss_pred HHHHHHHhCC-CCC--EEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCc
Confidence 9999999997 444 49999999999998884321 12345654 4555554111000 000 00001
Q ss_pred --CEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCC
Q 037063 249 --ARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATA 321 (588)
Q Consensus 249 --~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~ 321 (588)
..+..++.+ |+++|++++++ ..+++++|++..+++.+|.+.| +++| ++|+++|+++|+|+++
T Consensus 174 ~~~~~~~~~~~------d~~~le~~l~~-----~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~ 242 (427)
T 3fq8_A 174 TTANTLTTPYN------DLEAVKALFAE-----NPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVI 242 (427)
T ss_dssp HHTTEEEEETT------CHHHHHHHHHH-----STTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTT
T ss_pred ccCceeecCCC------CHHHHHHHHHh-----CCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 123444432 78999999972 1137899999999999999999 9999 9999999999999997
Q ss_pred cC---CC--CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccc
Q 037063 322 LG---SK--DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDE 396 (588)
Q Consensus 322 ~~---~~--d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~ 396 (588)
.. +. .....+ ..+|++++ .|.+|. ...+|++++++++++.+.+....
T Consensus 243 ~g~~~g~~~~~~~~~---~~~di~t~--sK~~~~-G~~~G~~~~~~~~~~~~~~~~~~---------------------- 294 (427)
T 3fq8_A 243 TGFRIAYGGVQEKFG---VTPDLTTL--GKIIGG-GLPVGAYGGKREIMQLVAPAGPM---------------------- 294 (427)
T ss_dssp TBTTTBTTHHHHHTT---CCCSEEEE--CGGGGT-TSSCEEEEECHHHHTTBTTTSSB----------------------
T ss_pred cccccCcchhhHhcC---CCCChhhh--hhhhhC-CcceEEEEEcHHHHHhhccCCCc----------------------
Confidence 61 10 011122 23787654 598873 34599999999888777643100
Q ss_pred cccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEE
Q 037063 397 SSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSL 476 (588)
Q Consensus 397 ~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv 476 (588)
+ ..+|.+...+ ..++..++|+.+.+ +.+.++++++.+++++.|.++.... +.+. .+ ...+.++
T Consensus 295 --~-~~~t~~~~~~-~~aa~~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~-~~------~~~g~~~ 357 (427)
T 3fq8_A 295 --Y-QAGTLSGNPL-AMTAGIKTLELLRQ---PGTYEYLDQITKRLSDGLLAIAQET---GHAA-CG------GQVSGMF 357 (427)
T ss_dssp --C-CCCTTTTCHH-HHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHT---TCCC-EE------EEETTEE
T ss_pred --c-ccCCCCcCHH-HHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhC---CCCe-EE------EEeeeEE
Confidence 0 1122221221 12444456665543 4456667777777777766531000 0111 11 1245677
Q ss_pred EEEeecCCCC---------CcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecC
Q 037063 477 AFNVFDWNGT---------RIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALG 547 (588)
Q Consensus 477 ~f~~~~~~g~---------~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg 547 (588)
.|.+.+.... ......+.+.|.++||.++.+.. .|+++.
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~--------------------------------~r~~~~ 405 (427)
T 3fq8_A 358 GFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF--------------------------------EAGFTS 405 (427)
T ss_dssp EEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT--------------------------------SCEECC
T ss_pred EEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCC--------------------------------CCEEee
Confidence 7776542100 00124566677778999876521 144556
Q ss_pred CCCCHHHHHHHHHHHHHhhhh
Q 037063 548 CLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 548 ~~~t~eDv~~li~~l~~~l~~ 568 (588)
+..|.||++++++.|++++++
T Consensus 406 ~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 406 LAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp TTCCHHHHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHh
Confidence 788999999999999998764
No 217
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.73 E-value=4.5e-16 Score=169.07 Aligned_cols=342 Identities=15% Similarity=0.124 Sum_probs=201.2
Q ss_pred CCCCeeeecCCC------CCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCC-chhHH
Q 037063 108 SLNNYVCFDYIG------HGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGS-EESEL 180 (588)
Q Consensus 108 ~~~~~vyLD~a~------~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~-~~~~~ 180 (588)
|..+..|||..+ .|.-++.+++++.+.+......+. + .++. ...++
T Consensus 59 d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~--------------------------~~~~~~~~~l 111 (472)
T 1ohv_A 59 DVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINR-P--------------------------ALGILPPENF 111 (472)
T ss_dssp BTTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCC-C--------------------------CTTTSCBTTH
T ss_pred eCCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcccccc-c--------------------------ccccccHHHH
Confidence 336788999855 355688899988665421101111 0 0010 01345
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC------------C------------CCC---CeEE-EcCCC
Q 037063 181 ESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP------------F------------YSN---PRLL-TVYDH 232 (588)
Q Consensus 181 ~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~------------~------------~~g---d~ll-~~~e~ 232 (588)
.+++.++++++++...+ .|+|++|+++|+..++.... + ++| ++|+ ....|
T Consensus 112 ~~~la~~l~~~~~~~~~--~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~y 189 (472)
T 1ohv_A 112 VEKLRESLLSVAPKGMS--QLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAF 189 (472)
T ss_dssp HHHHHHTGGGGCCTTCC--EEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCC
T ss_pred HHHHHHHHHHhCCCCcC--EEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCc
Confidence 55666666666654444 49999999999998887651 0 145 6655 55567
Q ss_pred chhHHHHHHHHH-----HhcCCEE---EEEeccC---C-C---------CccCHHHHHHHHhhhccccCCCcceEEEEeC
Q 037063 233 ENEAAALMIESS-----KKRGARV---SSAEFAW---P-N---------LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPL 291 (588)
Q Consensus 233 ~s~~~~~~~~~a-----~~~G~~v---~~v~~~~---~-~---------~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~ 291 (588)
|......+ .+. +..|..+ ..+++.. + . ...|+++|+++|+.. .....++++|++..
T Consensus 190 Hg~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~~~~~~~~~vive~ 266 (472)
T 1ohv_A 190 HGRTMGCL-ATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKY--RKKKKTVAGIIVEP 266 (472)
T ss_dssp CCSSHHHH-HHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHH--HHTTCCEEEEEECS
T ss_pred ccccHHHH-hcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhc--CCCCCCEEEEEEcC
Confidence 76443332 111 1122221 1223310 0 0 012578888888720 00012789999998
Q ss_pred CCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCc-CCC-----CCCCCCCCCCCCcEEEeccCcc-CCCCCCceEEEE
Q 037063 292 QSKVTGARYS----YMWM-SVAAEKGWHVLLDATAL-GSK-----DMDTLGLSLFKPDFLICSFYKI-FGENPSGFGCLF 359 (588)
Q Consensus 292 ~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~-~~~-----d~~~l~l~~~~~D~vv~S~~K~-~G~~P~G~G~L~ 359 (588)
++|++|.+.| +++| ++|+++|+++|+|+++. ++. ....+++. ..+|+++ +.|. +| | |+++
T Consensus 267 v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~-~~~Di~t--~sK~~l~----G-G~~~ 338 (472)
T 1ohv_A 267 IQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLD-DPADVMT--FSKKMMT----G-GFFH 338 (472)
T ss_dssp SBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCS-SCCSEEE--ECGGGSS----E-EEEE
T ss_pred CcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCC-CCCCEEE--Ecccccc----C-CccC
Confidence 9999999988 9999 99999999999999987 331 11122211 1278875 4596 45 3 6554
Q ss_pred EeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 037063 360 VKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLI 439 (588)
Q Consensus 360 v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~ 439 (588)
++++ ..+.+.. ..+|.+...+ ..++..++|+.+.+ +.+.++++.+.
T Consensus 339 -~~~~-~~~~~~~----------------------------~~~T~~~~~~-~~aaa~aal~~~~~---~~~~~~~~~~~ 384 (472)
T 1ohv_A 339 -KEEF-RPNAPYR----------------------------IFNTWLGDPS-KNLLLAEVINIIKR---EDLLSNAAHAG 384 (472)
T ss_dssp -CGGG-SCSSSSS----------------------------SCCSSSSCHH-HHHHHHHHHHHHHH---TTHHHHHHHHH
T ss_pred -chhh-ccccccc----------------------------ccCccCccHH-HHHHHHHHHHHHHh---CCHHHHHHHHH
Confidence 4443 1111111 1223211111 12455577887765 34678888888
Q ss_pred HHHHHHHHcc--cCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccc
Q 037063 440 NWLANALMNL--HHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGE 517 (588)
Q Consensus 440 ~~l~~~L~~L--~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~ 517 (588)
++|+++|.++ +++. .+.... ..+.++.|.+.+. .....+.+.|.++||.+..+
T Consensus 385 ~~l~~~L~~l~~~~~~------~v~~~~-----~~g~~~~~~~~~~----~~~~~~~~~l~~~Gv~~~~~---------- 439 (472)
T 1ohv_A 385 KVLLTGLLDLQARYPQ------FISRVR-----GRGTFCSFDTPDE----SIRNKLISIARNKGVMLGGC---------- 439 (472)
T ss_dssp HHHHHHHHHHHHHCTT------TCEEEE-----EETTEEEEECSSH----HHHHHHHHHHHHTTEECEEE----------
T ss_pred HHHHHHHHHHHhhCCC------cEEeec-----CCceEEEEEeCCh----hHHHHHHHHHHHCCeEEecC----------
Confidence 9998888875 2221 121111 2467877766431 12445666666789988753
Q ss_pred hHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 518 YEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 518 ~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~ 568 (588)
|..+||+++++.+|.+||+++++.|++++++
T Consensus 440 --------------------g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 440 --------------------GDKSIRFRPTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp --------------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred --------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 1128999999999999999999999988754
No 218
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.72 E-value=5.8e-17 Score=173.88 Aligned_cols=176 Identities=11% Similarity=0.016 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCCeEEEcC--CCchhHHHHHH------HHHHhcCCE
Q 037063 179 ELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNPRLLTVY--DHENEAAALMI------ESSKKRGAR 250 (588)
Q Consensus 179 ~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd~ll~~~--e~~s~~~~~~~------~~a~~~G~~ 250 (588)
...+++++.+++++|++.....++|+ |+|+|+.+++.++ +++||+|++.. .|.+ ....+. ..++..|++
T Consensus 65 ~~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al-~~~Gd~Vl~~~~~~y~~-~~~~~~l~g~~~~~~~~~G~~ 141 (431)
T 3ht4_A 65 IGRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGI-LRPGDELLYITGKPYDT-LEEIVGVRGKGVGSFKEYNIG 141 (431)
T ss_dssp HHHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTT-CCTTCEEEECSSSCCTT-HHHHTTSSSCSSSCSGGGTCE
T ss_pred hhHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHh-CCCCCEEEEeCCCCchh-HHHHHhhcccccchHHHcCCE
Confidence 34779999999999996432122355 7799999999999 89999987664 4443 332221 234567999
Q ss_pred EEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeC----CCCCCCccCCHHHH-HHHHH--cCcEEEEeCCCcC
Q 037063 251 VSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPL----QSKVTGARYSYMWM-SVAAE--KGWHVLLDATALG 323 (588)
Q Consensus 251 v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~----~sn~tG~~~pl~~I-~~a~~--~g~~vvvDaa~~~ 323 (588)
++.++.+ +++.+|+++|+++|+ +++++|++.+ +++++|.+.++++| ++|++ +|+++++|+++..
T Consensus 142 ~~~v~~~-~~~~~d~e~l~~~l~--------~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~ 212 (431)
T 3ht4_A 142 YNAVPLT-EGGLVDFEAVAAAIH--------SNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGE 212 (431)
T ss_dssp EEECCBC-TTSSBCHHHHHHHCC--------TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCT
T ss_pred EEEeCCC-CCCCcCHHHHHhhcC--------CCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChh
Confidence 9999998 568899999999998 7899999996 55555556667777 89999 9999999999776
Q ss_pred CC-CCCCCCCCCCCCcEEEeccCccCC--CCCCceEEEEEeCcchhcccC
Q 037063 324 SK-DMDTLGLSLFKPDFLICSFYKIFG--ENPSGFGCLFVKKSSASVLSG 370 (588)
Q Consensus 324 ~~-d~~~l~l~~~~~D~vv~S~~K~~G--~~P~G~G~L~v~~~~~~~l~~ 370 (588)
+. ...++. ..+|+++.|++|.+| ++|.| |+++.++++++.+..
T Consensus 213 ~~~~~~~~~---~g~Di~~~S~sK~lgg~~~~~G-G~v~~~~~li~~l~~ 258 (431)
T 3ht4_A 213 FIEEQEPCH---VGADLMAGSLIKNPGGGIVKTG-GYIVGKEQYVEACAY 258 (431)
T ss_dssp TSSSCCGGG---TTCSEEEEETTSGGGTTTCSSC-EEEEECHHHHHHHHH
T ss_pred hccCCCccc---cCCeEEEcCccccCCCCCCCce-EEEEecHHHHHHHHH
Confidence 52 122222 248999999999754 22667 999999988877654
No 219
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.72 E-value=5.6e-16 Score=166.17 Aligned_cols=337 Identities=10% Similarity=0.034 Sum_probs=206.4
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|+|.++. |..++.+++++.+.+... +. . +. ..+...+
T Consensus 54 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~---~~-~----------------------------~~-~~~~~~~ 100 (434)
T 2epj_A 54 DGARIVDLVLAYGPLILGHKHPRVLEAVEEALARG---WL-Y----------------------------GA-PGEAEVL 100 (434)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTC---SC-C----------------------------SS-CCHHHHH
T ss_pred CCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhC---CC-C----------------------------CC-CCHHHHH
Confidence 56779998654 446788888886665321 10 0 00 1456678
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeE-EEcCCCchhHHHHHH----HHH-----HhcCC---
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRL-LTVYDHENEAAALMI----ESS-----KKRGA--- 249 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~l-l~~~e~~s~~~~~~~----~~a-----~~~G~--- 249 (588)
++++++++++ .++ .|+||+|+|+|+.+++.... +..+++| +....||......+. ... ...|+
T Consensus 101 l~~~la~~~~-~~~--~v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~ 177 (434)
T 2epj_A 101 LAEKILGYVK-RGG--MIRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEA 177 (434)
T ss_dssp HHHHHHHHHC-TTC--EEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHH
T ss_pred HHHHHHHhCC-CCC--EEEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCc
Confidence 9999999995 333 49999999999999887611 2345664 455566642111100 000 01232
Q ss_pred ---EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCC
Q 037063 250 ---RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATA 321 (588)
Q Consensus 250 ---~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~ 321 (588)
.+..++. .|+++|+++|++. .+++++|++..+++++|.+.| +++| ++|+++|+++|+|+++
T Consensus 178 ~~~~~~~~~~------~d~~~le~~l~~~-----~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~ 246 (434)
T 2epj_A 178 VARLTLVTPY------NDVEALERVFAEY-----GDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVV 246 (434)
T ss_dssp HHTTEEEEET------TCHHHHHHHHHHH-----GGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETT
T ss_pred ccCceEecCC------CCHHHHHHHHHhC-----CCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcch
Confidence 3455543 2789999998721 136788999888888999998 9999 9999999999999998
Q ss_pred cCCCCCCCC---CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccc
Q 037063 322 LGSKDMDTL---GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESS 398 (588)
Q Consensus 322 ~~~~d~~~l---~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~ 398 (588)
. +...... +.....+|++ |++|.+|. +..+|++++++++++.+.+....
T Consensus 247 ~-g~~~g~~~~~~~~~~~~di~--s~sK~l~~-G~~~G~v~~~~~~~~~l~~~~~~------------------------ 298 (434)
T 2epj_A 247 T-GFRLGLEGAQGYFNIEGDII--VLGKIIGG-GFPVGAVAGSREVMSLLTPQGKV------------------------ 298 (434)
T ss_dssp T-TTTSSTTHHHHHHTCCCSEE--EEEGGGGT-TSSCEEEEECHHHHTTBTTTSSB------------------------
T ss_pred h-ceeCCcchhhHHhCCCCCee--eecchhcC-CcceeeeeecHHHHHhhccCCCc------------------------
Confidence 7 2111111 0001237875 66798874 34589999999887766542100
Q ss_pred cccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEE
Q 037063 399 QSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAF 478 (588)
Q Consensus 399 f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f 478 (588)
+ ..+|.+...+ ..++..++|+.+++ +.+.++++.+.+++++.|.++.... +.. ..+. ..|.++.+
T Consensus 299 ~-~~~t~~~~~~-~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~---~~~-~~~~------~~g~~~~i 363 (434)
T 2epj_A 299 F-NAGTFNAHPI-TMAAGLATLKALEE---EPVYSVSREAAKALEEAASEVLDRT---GLP-YTIN------RVESMMQL 363 (434)
T ss_dssp C-CCCTTTTCHH-HHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHHHHHHH---TCC-EEEE------EETTEEEE
T ss_pred c-cCCCCCcCHH-HHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhhC---CCc-EEEE------EeeeEEEE
Confidence 0 1122221111 12455567777665 3466777888888888887641000 111 1111 24677777
Q ss_pred EeecCC--C-------CCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC
Q 037063 479 NVFDWN--G-------TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL 549 (588)
Q Consensus 479 ~~~~~~--g-------~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~ 549 (588)
.+.+.. + .......+.+.|.++||.++.|. . ..+|++ +.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----------------------------~--~~~~~~--~~ 411 (434)
T 2epj_A 364 FIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSN----------------------------L--EAVFTG--LP 411 (434)
T ss_dssp EETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSST----------------------------T--SCEECC--TT
T ss_pred EEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccC----------------------------C--CcEEEe--cc
Confidence 775310 0 00123456666778899987651 1 145555 67
Q ss_pred CCHHHHHHHHHHHHHhhhh
Q 037063 550 TNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 550 ~t~eDv~~li~~l~~~l~~ 568 (588)
.+.+|++++++.|++++++
T Consensus 412 ~t~e~i~~~l~~l~~~l~~ 430 (434)
T 2epj_A 412 HQGEALEIAVEGLRSSLKT 430 (434)
T ss_dssp CSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 8999999999999998765
No 220
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.72 E-value=1.3e-16 Score=170.88 Aligned_cols=333 Identities=13% Similarity=0.093 Sum_probs=199.6
Q ss_pred CCeeeecCCCCC------CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGHG------LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~g------l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|||+.+.. ..++.+++++.+.+.... . ++. ..+...+
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~---~-----------------------------~~~-~~~~~~~ 97 (429)
T 4e77_A 51 DGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGL---S-----------------------------FGA-PTEMEVK 97 (429)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCS---C-----------------------------CSS-CCHHHHH
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCc---c-----------------------------cCC-CCHHHHH
Confidence 578899997653 247888888876653210 0 000 1355678
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEE-EcCCCchhHHHHHHHHHHhcCC------------
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLL-TVYDHENEAAALMIESSKKRGA------------ 249 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~------------ 249 (588)
++++++++++ .++ .|+||+|+|+|+.+++.... +..+++|+ ....||...... ... ...|.
T Consensus 98 la~~l~~~~~-~~~--~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~-~~~-~~~~~~~~~~~~~~~~~ 172 (429)
T 4e77_A 98 MAQLVTDLVP-TMD--MVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCL-LVK-AGSGALTLGQPNSPGVP 172 (429)
T ss_dssp HHHHHHHHST-TCS--EEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC--------------------CCCTTSC
T ss_pred HHHHHHhhCC-CCC--EEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhh-hhh-cCCcccccCCCCcCCCC
Confidence 8999999987 344 49999999999999887431 12345554 566666532211 100 00111
Q ss_pred -----EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeC
Q 037063 250 -----RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDA 319 (588)
Q Consensus 250 -----~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDa 319 (588)
.+..++. .|.++|+++|++ ..+++++|++..+++.+|.+.| +++| ++|+++|+++|+|+
T Consensus 173 ~~~~~~~~~~~~------~d~~~le~~l~~-----~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DE 241 (429)
T 4e77_A 173 TDFAKHTLTCTY------NDLASVRQAFEQ-----YPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDE 241 (429)
T ss_dssp GGGGTTEEEECT------TCHHHHHHHHHH-----STTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEE
T ss_pred CccCCceeecCC------CCHHHHHHHHHh-----cCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1222222 178999999872 1146788888888888999999 9999 99999999999999
Q ss_pred CCc---CCC--CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 320 TAL---GSK--DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 320 a~~---~~~--d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
++. .+. ....++ ..+|++ ++.|.+|. +.++|+++.++++++.+.+....
T Consensus 242 v~~g~r~g~~~~~~~~~---~~pdi~--t~sK~~~~-G~~~G~~~~~~~~~~~l~~~~~~-------------------- 295 (429)
T 4e77_A 242 VMTGFRVALAGAQDYYH---VIPDLT--CLGKIIGG-GMPVGAFGGRREVMNALAPTGPV-------------------- 295 (429)
T ss_dssp TTTBTTTBTTCHHHHTT---CCCSEE--EEEGGGGT-TSCCEEEEECHHHHTTBTTTSSB--------------------
T ss_pred cccCcccCcchHHHhcC---CCCCee--eecccccC-CCCeEEEEECHHHHHHhccCCCc--------------------
Confidence 987 221 011222 237875 66698873 56789999999888776542110
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
+ ..+|.+...+ ..++..++|+.++. +.+.++++++.+++++.|.++.... +... .+ ...|.
T Consensus 296 ----~-~~~t~~~~~~-~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~---~~~~-~~------~~~g~ 356 (429)
T 4e77_A 296 ----Y-QAGTLSGNPI-AMAAGFACLTEISQ---VGVYETLTELTDSLATGLRHAAKEE---NIPL-VV------NHVGG 356 (429)
T ss_dssp ----C-C--CCCCCHH-HHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHT---TCCC-EE------EEETT
T ss_pred ----c-ccCCCCCCHH-HHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhC---CCce-EE------EEeee
Confidence 0 1112111111 12444566666533 4566667777777777766531000 1111 11 12467
Q ss_pred EEEEEeecCCC-CC---------cCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEE
Q 037063 475 SLAFNVFDWNG-TR---------IDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTA 544 (588)
Q Consensus 475 iv~f~~~~~~g-~~---------i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRv 544 (588)
++.+.+.+... .. .....+.+.|.++||.++.+.. ..+|+
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------------------------------~~~~~ 406 (429)
T 4e77_A 357 MFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSAF------------------------------EAGFM 406 (429)
T ss_dssp EEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSSTT------------------------------SCEEC
T ss_pred EEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeecCC------------------------------CCEEE
Confidence 77777754210 00 0124566667778999876511 14555
Q ss_pred ecCCCCCHHHHHHHHHHHHHhhhh
Q 037063 545 ALGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 545 Slg~~~t~eDv~~li~~l~~~l~~ 568 (588)
....|.||++++++.|++++++
T Consensus 407 --~~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 407 --SLAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp --CTTCCHHHHHHHHHHHHHHHTT
T ss_pred --eccCCHHHHHHHHHHHHHHHHh
Confidence 4778999999999999998764
No 221
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.72 E-value=2.9e-16 Score=168.20 Aligned_cols=332 Identities=11% Similarity=0.011 Sum_probs=202.5
Q ss_pred CCeeeecCCCCC------CCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGHG------LFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~g------l~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+.-|||+.+.. ..++.+++++.+.+.... . ++. ..+...+
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~---~-----------------------------~~~-~~~~~~~ 97 (429)
T 3k28_A 51 DGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGT---S-----------------------------FGA-PTEIENK 97 (429)
T ss_dssp TCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCS---C-----------------------------CSS-CCHHHHH
T ss_pred CCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCc---C-----------------------------cCC-CCHHHHH
Confidence 577899998753 358889998866653210 0 000 0345568
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCC-CCCCeEE-EcCCCchhHHHHHHHHHHhcCC------------
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPF-YSNPRLL-TVYDHENEAAALMIESSKKRGA------------ 249 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~-~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~------------ 249 (588)
++++++++++ .++ .|+||+|+|+|+.+++..+.. .++++|+ ....||...... ....|.
T Consensus 98 l~~~la~~~~-~~~--~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~----~~~~g~~~~~~~~~~~~~ 170 (429)
T 3k28_A 98 LAKLVIERVP-SIE--IVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSL----LIKAGSGVATLGLPDSPG 170 (429)
T ss_dssp HHHHHHHHST-TCS--EEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGG----CSSCCTTC-----CCCTT
T ss_pred HHHHHHHhCC-CCC--EEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHH----HHhcCCcccccCCCCcCC
Confidence 8999999986 344 499999999999998876511 2455655 455555322111 011121
Q ss_pred -------EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEE
Q 037063 250 -------RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLL 317 (588)
Q Consensus 250 -------~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvv 317 (588)
.+..++.+ |.++|++++.+. .+++++|++..+++.+|.+.| +++| ++|+++|+++|+
T Consensus 171 ~~~~~~~~~~~~~~~------d~~~le~~l~~~-----~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 239 (429)
T 3k28_A 171 VPEGVAKNTITVAYN------DLESVKYAFEQF-----GDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIF 239 (429)
T ss_dssp CCHHHHTTEEEEETT------CHHHHHHHHHHH-----GGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEE
T ss_pred CCCcccCceeecCCC------CHHHHHHHHHhC-----CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 23333321 788999988721 146788999989999999999 9999 999999999999
Q ss_pred eCCCcCCCCCCCC---CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccc
Q 037063 318 DATALGSKDMDTL---GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETL 394 (588)
Q Consensus 318 Daa~~~~~d~~~l---~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~ 394 (588)
|+++.. ...... ......+|+++ +.|.+|. +.++|++++++++++.+.+....
T Consensus 240 DEv~~g-~~~g~~~~~~~~~~~~di~t--~sK~~~~-G~~iG~~~~~~~~~~~~~~~~~~-------------------- 295 (429)
T 3k28_A 240 DEVMTG-FRVAYNCGQGYYGVTPDLTC--LGKVIGG-GLPVGAYGGKAEIMRQVAPSGPI-------------------- 295 (429)
T ss_dssp ECTTTT-TTSSTTHHHHHHTCCCSEEE--ECGGGGT-TSCCEEEEECHHHHTTBTTTSSB--------------------
T ss_pred eccccc-cccCcchHHHHhCCCCceeh--hhhhhcC-CCCeEEEEEcHHHHhhhccCCCc--------------------
Confidence 999752 100110 00012377764 5697774 56799999999888766542100
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCccc
Q 037063 395 DESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGP 474 (588)
Q Consensus 395 ~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~ 474 (588)
+ ..+|.+...+ +..+++..++.+. +++.++++++.+++++.|.++... .+.+... ...|.
T Consensus 296 ----~-~~~t~~~~~~----a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~-----~~~~~~~-----~~~g~ 355 (429)
T 3k28_A 296 ----Y-QAGTLSGNPL----AMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEK-----HGIPHHI-----NRAGS 355 (429)
T ss_dssp ----C-CCCTTTTCHH----HHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHH-----TTCCCEE-----EEETT
T ss_pred ----c-ccCCCCCChH----HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhh-----CCCCEEE-----Eeecc
Confidence 0 1112222221 2223333343333 667778888888888888764100 0111111 12456
Q ss_pred EEEEEeecCCCC---------CcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEe
Q 037063 475 SLAFNVFDWNGT---------RIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAA 545 (588)
Q Consensus 475 iv~f~~~~~~g~---------~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvS 545 (588)
++.+.+.+.... ......+.+.|.++||.++.+. . ..+|++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----------------------------~--~~~r~~ 405 (429)
T 3k28_A 356 MIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQ----------------------------F--EGLFLS 405 (429)
T ss_dssp EEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSST----------------------------T--SCBCCC
T ss_pred EEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEecCC----------------------------C--CCEEEE
Confidence 777766432100 0112456666778899987641 1 167876
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhh
Q 037063 546 LGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 546 lg~~~t~eDv~~li~~l~~~l~~ 568 (588)
+..|.||++++++.|++++++
T Consensus 406 --~~~t~e~i~~~l~~l~~~l~~ 426 (429)
T 3k28_A 406 --TVHSDADIEATIAAAEIAMSK 426 (429)
T ss_dssp --TTCCHHHHHHHHHHHHHHHHT
T ss_pred --CCCCHHHHHHHHHHHHHHHHH
Confidence 577999999999999998764
No 222
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.71 E-value=7.9e-16 Score=166.00 Aligned_cols=334 Identities=13% Similarity=0.016 Sum_probs=196.8
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|+|.++. |..++.+++++.+.+... .. ++. ..+..++
T Consensus 55 ~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~---~~-----------------------------~~~-~~~~~~~ 101 (453)
T 2cy8_A 55 DGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHG---VQ-----------------------------YAA-SHPLEVR 101 (453)
T ss_dssp TCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTT---CS-----------------------------SCS-SCHHHHH
T ss_pred CCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhC---CC-----------------------------CCC-CCHHHHH
Confidence 45679998544 446788888886665320 00 000 1466778
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHh---CCCCCCCeE-EEcCCCchhHHHHHHHHH-------HhcCCE--
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAES---YPFYSNPRL-LTVYDHENEAAALMIESS-------KKRGAR-- 250 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s---~~~~~gd~l-l~~~e~~s~~~~~~~~~a-------~~~G~~-- 250 (588)
+.+++++.++ +++ .|+||+|+++|+.+++.. + .+ +++| +....||...... .... ...|+.
T Consensus 102 la~~l~~~~~-~~~--~v~~~~gg~eA~~~al~~ar~~-~~-~~~vi~~~~~yhg~~~~~-~~~~~~~~~~~~~~g~~~~ 175 (453)
T 2cy8_A 102 WAERIVAAFP-SIR--KLRFTGSGTETTLLALRVARAF-TG-RRMILRFEGHYHGWHDFS-ASGYNSHFDGQPAPGVLPE 175 (453)
T ss_dssp HHHHHHHHCT-TCS--EEEEESCHHHHHHHHHHHHHHH-HC-CCEEEEECC-----------------------------
T ss_pred HHHHHHhhCC-CCC--EEEEeCCHHHHHHHHHHHHHHh-hC-CCEEEEEcCCcCCCchhh-HhhcCCccCCCcCCCCCcc
Confidence 8888888886 444 499999999999998887 5 33 4564 4555566422111 1101 012332
Q ss_pred ----EEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCC
Q 037063 251 ----VSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATA 321 (588)
Q Consensus 251 ----v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~ 321 (588)
+..++. .|+++|+++|++. .+++++|++..+++++|.+.| +++| ++|+++|+++|+|+++
T Consensus 176 ~~~~~~~~~~------~d~~~le~~l~~~-----~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~ 244 (453)
T 2cy8_A 176 TTANTLLIRP------DDIEGMREVFANH-----GSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVI 244 (453)
T ss_dssp CGGGEEEECT------TCHHHHHHHHHHH-----GGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred ccCceeecCC------CCHHHHHHHHHhc-----CCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCc
Confidence 333332 3789999998720 136788888888788999988 9999 9999999999999998
Q ss_pred cCCCCCCCC---CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccc
Q 037063 322 LGSKDMDTL---GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESS 398 (588)
Q Consensus 322 ~~~~d~~~l---~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~ 398 (588)
. +...... +.....+|++ |+.|.+|. +.++|++++++++++.+.+...+. .
T Consensus 245 ~-g~~~g~~~~~~~~~~~~di~--s~sK~l~~-G~~~G~v~~~~~~~~~l~~~~~~~--~-------------------- 298 (453)
T 2cy8_A 245 S-GFRVGNHGMQALLDVQPDLT--CLAKASAG-GLPGGILGGREDVMGVLSRGSDRK--V-------------------- 298 (453)
T ss_dssp T-TTTTCTTHHHHHHTCCCSEE--EEEGGGGT-TSSCEEEEECHHHHTTSSSCC--------------------------
T ss_pred c-ccccCchhhhHHhCCCCcEE--EEChhhhC-CcceEEEechHHHHHHhccccCCC--c--------------------
Confidence 6 3111111 0001237865 67798874 456999999998877665411010 0
Q ss_pred cccCCCCCccchhhHHHHHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE
Q 037063 399 QSKFPESSISGVSSKLVECKGLDH-ADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA 477 (588)
Q Consensus 399 f~e~GT~~~~~~~~~~al~~aL~~-l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~ 477 (588)
+ ..+|.+...+ ..++..++|+. + .+.+.++++.+.+++++.|.++... .+.+..+. ..|.++.
T Consensus 299 ~-~~~t~~~n~~-~~aa~~aal~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~-----~~~~~~~~-----~~g~~~~ 362 (453)
T 2cy8_A 299 L-HQGTFTGNPI-TAAAAIAAIDTIL----EDDVCAKINDLGQFAREAMNHLFAR-----KGLNWLAY-----GRFSGFH 362 (453)
T ss_dssp ------CCCCHH-HHHHHHHHHHHHH----HTTHHHHHHHHHHHHHHHHHHHHHH-----TTCCEEEE-----CCTTEEE
T ss_pred e-eCCCCCCCHH-HHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHHHHHHhh-----CCCcEEEE-----EeeeEEE
Confidence 0 1112121111 12444456665 4 2556788888888888888765100 11111111 3467777
Q ss_pred EEeec-----C------CC----CCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEE
Q 037063 478 FNVFD-----W------NG----TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVV 542 (588)
Q Consensus 478 f~~~~-----~------~g----~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~v 542 (588)
+.+.+ . .. .......+.+.|.++||.++.+ + .+
T Consensus 363 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~------------------------------~--~~ 410 (453)
T 2cy8_A 363 LMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGGR------------------------------G--SV 410 (453)
T ss_dssp EEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTT------------------------------T--EE
T ss_pred EEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeCC------------------------------C--CE
Confidence 77753 1 00 0011345666666789988421 1 46
Q ss_pred EEecCCCCCHHHHHHHHHHHHHhhhhh
Q 037063 543 TAALGCLTNFEDTYRLWAFVSRFLDAD 569 (588)
Q Consensus 543 RvSlg~~~t~eDv~~li~~l~~~l~~~ 569 (588)
|++ +..+.+|++++++.|++++++.
T Consensus 411 ~l~--~~~t~~~i~~~l~~l~~~l~~~ 435 (453)
T 2cy8_A 411 FLS--AQHEREHVEHLVTTFDRVLDRL 435 (453)
T ss_dssp ECC--TTCCHHHHHHHHHHHHHHHHHH
T ss_pred Eee--ccCCHHHHHHHHHHHHHHHHHH
Confidence 654 7789999999999999988654
No 223
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.71 E-value=2.8e-16 Score=173.63 Aligned_cols=158 Identities=13% Similarity=0.090 Sum_probs=112.5
Q ss_pred ceEEEecCHHHHHHHHHHh-----CCCCCCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCC-CCccCHHHHHHHH
Q 037063 199 YTLVFTANQSSAFKLLAES-----YPFYSNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWP-NLRIHSGKLMKKI 272 (588)
Q Consensus 199 ~~vvft~g~T~al~lv~~s-----~~~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~-~~~i~~e~l~~~i 272 (588)
.+|++|+|+++|+.+++.+ + +++||+|++....+.... .... ....|++++.++.+.. +..+|.++|++.+
T Consensus 166 ~~I~~t~G~~eal~~~~~~l~~~~l-~~~Gd~Vlv~~P~y~~~~-~~~~-~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~ 242 (546)
T 2zy4_A 166 VNLFAVEGGTAAMAYIFESLKLNGL-LKAGDKVAIGMPVFTPYI-EIPE-LAQYALEEVAINADPSLNWQYPDSELDKLK 242 (546)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHTTS-SCTTCEEEEEESCCHHHH-HHHH-STTSCCEEEEEECBGGGTTBCCHHHHGGGG
T ss_pred ceEEEECCHHHHHHHHHHHhhhhhc-CCCCCEEEEeCCCCccHH-HHHH-HcCCCcEEEEEecCcccCCCCCHHHHHHhh
Confidence 4699999999999999887 5 789999765544333122 1111 2345799999998632 2458999988776
Q ss_pred hhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHH--HHcCcEEEEeCCCcCCC-CCCCC-CCCCCCCcEEEecc
Q 037063 273 VGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVA--AEKGWHVLLDATALGSK-DMDTL-GLSLFKPDFLICSF 344 (588)
Q Consensus 273 ~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a--~~~g~~vvvDaa~~~~~-d~~~l-~l~~~~~D~vv~S~ 344 (588)
+ +++++|++++++||||..+|.++ | ++| +++|++||+|.+..... +...+ .+. ...++++.|+
T Consensus 243 ~--------~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~-~~~~i~~~S~ 313 (546)
T 2zy4_A 243 D--------PAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAIC-PENTLLVYSF 313 (546)
T ss_dssp S--------TTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHC-GGGEEEEEES
T ss_pred C--------CCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhC-CCCEEEEEeC
Confidence 5 68999999999999999999776 4 667 77899999999965321 11111 110 1257899999
Q ss_pred CccCCCCCCceEEEEEeCc-chhcc
Q 037063 345 YKIFGENPSGFGCLFVKKS-SASVL 368 (588)
Q Consensus 345 ~K~~G~~P~G~G~L~v~~~-~~~~l 368 (588)
+|.+|.+..++|+++++++ +++.+
T Consensus 314 SK~~g~~GlRiG~~~~~~~~l~~~l 338 (546)
T 2zy4_A 314 SKYFGATGWRLGVVAAHQQNVFDLA 338 (546)
T ss_dssp TTTTTCGGGCEEEEEEESSCHHHHH
T ss_pred ccccCCCCcceEEEEECCHHHHHHH
Confidence 9999842234899999986 66554
No 224
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.71 E-value=8.8e-16 Score=165.89 Aligned_cols=347 Identities=10% Similarity=0.009 Sum_probs=205.5
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|||+.+. |.-++.+++++.+.+..... . + .. .+ ..+...+
T Consensus 62 ~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~--~--~--------------------~~----~~--~~~~~~~ 111 (453)
T 4ffc_A 62 DGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTH--T--C--------------------FM----VT--PYEQYVQ 111 (453)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSC--C--T--------------------TT----TS--CCHHHHH
T ss_pred CCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccc--c--c--------------------cC----cC--CCHHHHH
Confidence 56789998864 44588889888766533110 0 0 00 00 1455678
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCC-CeEE-EcCCCchhHHHHHHHHHH-----h-----cCCEE
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSN-PRLL-TVYDHENEAAALMIESSK-----K-----RGARV 251 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~g-d~ll-~~~e~~s~~~~~~~~~a~-----~-----~G~~v 251 (588)
++++++++++.+. ...|+||+|+|+|+.+++......+| ++|+ ....||...... ..+.. + ....+
T Consensus 112 la~~l~~~~~~~~-~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~-~~~~~~~~~~~~~~~~~~~~~ 189 (453)
T 4ffc_A 112 VAELLNALTPGDH-DKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLT-MALTAKSMPYKSQFGPFAPEV 189 (453)
T ss_dssp HHHHHHHHSSCSS-CEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHH-HHHCCCCTTTTTTSCSCCSSE
T ss_pred HHHHHHHhCCCCC-CcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHH-HhhcCCCcccccCCCCCCCCc
Confidence 9999999998642 13599999999999998866421134 5555 566666533222 11100 0 01145
Q ss_pred EEEeccCC--C-CccC--------HHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEE
Q 037063 252 SSAEFAWP--N-LRIH--------SGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHV 315 (588)
Q Consensus 252 ~~v~~~~~--~-~~i~--------~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~v 315 (588)
..+++..+ + ..++ .+.|++.+. ..++.+|++..+++..|.+.| +++| ++|+++|+++
T Consensus 190 ~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~-------~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~ll 262 (453)
T 4ffc_A 190 YRMPASYPLRDEPGLTGEEAARRAISRIETQIG-------AQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVF 262 (453)
T ss_dssp EEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTC-------GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEE
T ss_pred EEeCCCccccCccccchHHHHHHHHHHHHHhcC-------CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 66665311 1 0112 233443332 145677888877777888888 8889 9999999999
Q ss_pred EEeCCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccc
Q 037063 316 LLDATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELE 392 (588)
Q Consensus 316 vvDaa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~ 392 (588)
|+|.++. ++.. ....+.....+|+++ +.|.+|. +.++|++++++++++.+.+...++
T Consensus 263 I~DEv~~g~g~~g~~~a~~~~~~~pdi~t--~sK~~~~-G~~~G~~~~~~~i~~~~~~~~~~~----------------- 322 (453)
T 4ffc_A 263 IADEVQTGFARTGAWFASEHEGIVPDIVT--MAKGIAG-GMPLSAVTGRAELMDAVYAGGLGG----------------- 322 (453)
T ss_dssp EEECTTTTTTTTSSSSTHHHHTCCCSEEE--ECGGGGT-TSSCEEEEEEHHHHTTSCTTSSCC-----------------
T ss_pred EEecCccCCCcccccchhhhcCCCcchHh--hhhhhcC-CcCeEEEEECHHHHhhhcccCcCC-----------------
Confidence 9999975 2211 111110122378765 5597774 456899999998887776543221
Q ss_pred cccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCc
Q 037063 393 TLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDR 472 (588)
Q Consensus 393 ~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~r 472 (588)
|.+...+ ..++..++|+.++. +.+.++++++.+++++.|.++.. ..+.+..+. ..
T Consensus 323 -----------t~~~~~~-~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~l~~~~~-----~~~~~~~~~-----~~ 377 (453)
T 4ffc_A 323 -----------TYGGNPV-TCAAAVAALGVMRE---LDLPARARAIEASVTSRLSALAE-----EVDIIGEVR-----GR 377 (453)
T ss_dssp -----------SSSSCHH-HHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHH-----HCSSEEEEE-----EE
T ss_pred -----------CCCcCHH-HHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHHHHh-----hCCCeEEEE-----ee
Confidence 1111111 11344466666654 34455556666666666554310 023333221 24
Q ss_pred ccEEEEEeecCCC---CCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC
Q 037063 473 GPSLAFNVFDWNG---TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL 549 (588)
Q Consensus 473 g~iv~f~~~~~~g---~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~ 549 (588)
|.++.+.+.+... .......+.+.|.++||.++++.. . ...+|+++++.
T Consensus 378 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------------~-~~~iRi~~~~~ 429 (453)
T 4ffc_A 378 GAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGT---------------------------F-GNVIRLLPPLV 429 (453)
T ss_dssp TTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECT---------------------------T-SCEEEECCCTT
T ss_pred ceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCC---------------------------C-CCEEEEECCCC
Confidence 6777777743100 001234566777788999876511 1 12899999999
Q ss_pred CCHHHHHHHHHHHHHhhhh
Q 037063 550 TNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 550 ~t~eDv~~li~~l~~~l~~ 568 (588)
.+.|||+++++.|++++++
T Consensus 430 ~t~e~i~~~l~~l~~~l~~ 448 (453)
T 4ffc_A 430 IGDDLLDEGITALSDIIRA 448 (453)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998875
No 225
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.70 E-value=3.5e-15 Score=161.05 Aligned_cols=351 Identities=9% Similarity=-0.022 Sum_probs=207.9
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|||..+. |.-++.+++++.+.+... .+. + .. .+ ..+...+
T Consensus 59 ~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~--~~~--~--------------------~~----~~--~~~~~~~ 108 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDF--THT--C--------------------FM----VT--PYEGYVA 108 (451)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTC--SCC--T--------------------TT----TS--CCHHHHH
T ss_pred CCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhc--ccc--c--------------------CC----cc--CCHHHHH
Confidence 57789998764 445888888887665321 111 0 00 00 1355678
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCC-CeEE-EcCCCchhHHHHHHHHHH-----h-----cCCEE
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSN-PRLL-TVYDHENEAAALMIESSK-----K-----RGARV 251 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~g-d~ll-~~~e~~s~~~~~~~~~a~-----~-----~G~~v 251 (588)
++++++++++.+. .+.|+||+|+|+|+.+++......+| ++|+ ....||...... ..+.. + ....+
T Consensus 109 la~~l~~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~-~~~~~~~~~~~~~~~~~~~~~ 186 (451)
T 3oks_A 109 VCEQLNRLTPVRG-DKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLT-MALTAKVMPYKDGFGPFAPEI 186 (451)
T ss_dssp HHHHHHHHSSCCS-SEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHH-HHHCCCCTTTTTTCCSCCSSE
T ss_pred HHHHHHHhCCcCC-CCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHH-HHhcCCCcccccCCCCCCCCc
Confidence 9999999987542 23599999999999998876521134 5555 556666533222 11100 0 11256
Q ss_pred EEEeccCC--C----------CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcE
Q 037063 252 SSAEFAWP--N----------LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWH 314 (588)
Q Consensus 252 ~~v~~~~~--~----------~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~ 314 (588)
..+++..+ + +..+.+.+++.|.+ ....+++.+|++..+++..|.+.| +++| ++|+++|++
T Consensus 187 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~---~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~ 263 (451)
T 3oks_A 187 YRAPLSYPFRDAEFGKELATDGELAAKRAITVIDK---QIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVV 263 (451)
T ss_dssp EEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHH---HTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCE
T ss_pred EEeCCCccccccccccccchhhHHHHHHHHHHHHh---hcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCE
Confidence 66665310 0 00123444444441 111246788888888888889888 9999 999999999
Q ss_pred EEEeCCCc-CCCC--CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccc
Q 037063 315 VLLDATAL-GSKD--MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIEL 391 (588)
Q Consensus 315 vvvDaa~~-~~~d--~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~ 391 (588)
+|+|.++. ++.. ...+......+|++ ++.|.+|. +..+|++++++++++.+.+...+. +
T Consensus 264 lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~-G~~iG~v~~~~~~~~~~~~~~~~~--t------------- 325 (451)
T 3oks_A 264 FIADEVQTGFARTGAMFACEHEGIDPDLI--VTAKGIAG-GLPLSAVTGRAEIMDSPHVSGLGG--T------------- 325 (451)
T ss_dssp EEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-TSSCEEEEEEHHHHTCSCTTSBCC--S-------------
T ss_pred EEEEecccCCCccccchhhhhcCCCCCee--eehhhhhC-CcceEEEEECHHHHhhhcCCCcCC--C-------------
Confidence 99999975 2211 11111112237877 55697774 456899999998887776433221 0
Q ss_pred ccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCC
Q 037063 392 ETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFD 471 (588)
Q Consensus 392 ~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~ 471 (588)
| +.+..+ .++..++|+.+++ +.+.++.+++.+++++.|.++.. ..+.+..+. .
T Consensus 326 -------~----~~~~~~---~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~-----~~~~~~~~~-----~ 378 (451)
T 3oks_A 326 -------Y----GGNPIA---CAAALATIETIES---EGLVARAQQIEKIMKDRLGRLQA-----EDDRIGDVR-----G 378 (451)
T ss_dssp -------S----SSCHHH---HHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHH-----HCTTEEEEE-----E
T ss_pred -------C----CCCHHH---HHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHh-----hCCCeEEEE-----E
Confidence 0 011111 1344466766654 34555666666666666655310 013333221 2
Q ss_pred cccEEEEEeecCCC---CCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCC
Q 037063 472 RGPSLAFNVFDWNG---TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGC 548 (588)
Q Consensus 472 rg~iv~f~~~~~~g---~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~ 548 (588)
.|.++.+.+.+... .......+.+.|.++||.++++... . ..+|+++++
T Consensus 379 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--------------------------~--~~iRi~~~~ 430 (451)
T 3oks_A 379 RGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTY--------------------------G--NVVRFLPPL 430 (451)
T ss_dssp ETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECTT--------------------------S--CEEEECCCT
T ss_pred eeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCCC--------------------------C--CEEEEECCC
Confidence 46778787743100 0012445677777889998764110 1 289999999
Q ss_pred CCCHHHHHHHHHHHHHhhhh
Q 037063 549 LTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 549 ~~t~eDv~~li~~l~~~l~~ 568 (588)
..+.|||+++++.|++++++
T Consensus 431 ~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 431 SIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp TCCHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHhh
Confidence 99999999999999998763
No 226
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.68 E-value=1.1e-14 Score=152.66 Aligned_cols=358 Identities=13% Similarity=0.063 Sum_probs=211.5
Q ss_pred CCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCch--hHHHHHHHHHHHHHhCCC
Q 037063 118 IGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEE--SELESKIRKRIMDFMNIS 195 (588)
Q Consensus 118 a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~--~~~~~~~r~~ia~~lga~ 195 (588)
++-...|+.|++++...+... |-.+.+. +.+||+.+ .+++.-++++..++||++
T Consensus 61 ASEN~~S~aV~~a~gS~ltnK-----------------------YaEGyPg-~RyYgGce~vD~iE~la~~rak~lF~a~ 116 (490)
T 3ou5_A 61 ASENFCSRAALEALGSCLNNK-----------------------YSEGYPG-KRYYGGAEVVDEIELLCQRRALEAFDLD 116 (490)
T ss_dssp TTCCCCCHHHHHHHTSGGGTC-----------------------CCCC-----------CHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCcCCHHHHHHhcCccccc-----------------------ccCCCCC-ccccCCChHHHHHHHHHHHHHHHHhCCC
Confidence 677789999999975444321 1122222 34566654 778888899999999998
Q ss_pred CCCceE-EEecCHHHHHHHHHHhCCCCCCCeEE-EcCCCchh-HHHHHHH----HHHhcCCEEEEEeccCCCCccCHHHH
Q 037063 196 EDDYTL-VFTANQSSAFKLLAESYPFYSNPRLL-TVYDHENE-AAALMIE----SSKKRGARVSSAEFAWPNLRIHSGKL 268 (588)
Q Consensus 196 ~~e~~v-vft~g~T~al~lv~~s~~~~~gd~ll-~~~e~~s~-~~~~~~~----~a~~~G~~v~~v~~~~~~~~i~~e~l 268 (588)
..++.| |=.-+++.|+..+..++ ++|||+|+ .+..+..- ++..+.. -+..+-.++...+++..++.||.+++
T Consensus 117 ~A~w~VNVQP~SGs~AN~avy~Al-l~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~ 195 (490)
T 3ou5_A 117 PAQWGVNVQPYSGSPANLAVYTAL-LQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQL 195 (490)
T ss_dssp TTTEEEECCCSSHHHHHHHHHHHH-CC-CCCEECBC----------------------------CBCEETTTTEECHHHH
T ss_pred ccccCCCCCcCCHHHHHHHHHHHH-cCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHH
Confidence 664322 33347788888888999 99999987 22222110 1111000 00111234555566767889999999
Q ss_pred HHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCC-----CCCCCCCCCCCCCcEEEe
Q 037063 269 MKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGS-----KDMDTLGLSLFKPDFLIC 342 (588)
Q Consensus 269 ~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~-----~d~~~l~l~~~~~D~vv~ 342 (588)
++...+ .+++||++-... .-..+|++++ ++|++.|+++++|.+|..+ .-..++. .+|++.+
T Consensus 196 ~~~A~~-------~kPklIi~G~Sa--Y~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~----~ADvVTt 262 (490)
T 3ou5_A 196 ALTARL-------FRPRLIIAGTSA--YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK----HADIVTT 262 (490)
T ss_dssp HHHHHH-------HCCSEEEECCSS--CCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG----TCSEEEE
T ss_pred HHHHhh-------cCCCeEEECCcc--CccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccc----cceEEec
Confidence 999874 578999887644 4567899999 9999999999999998775 2235554 2899999
Q ss_pred ccCc-cCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccc-cCCCCCccchhhHHHHHHHH
Q 037063 343 SFYK-IFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQS-KFPESSISGVSSKLVECKGL 420 (588)
Q Consensus 343 S~~K-~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~-e~GT~~~~~~~~~~al~~aL 420 (588)
|.|| +.| |.| |+++.+++... ..+.. +. ...... ...++. ..|- -.|.|-...+ ++...++
T Consensus 263 TTHKTLrG--PrG-G~Il~~~~~~~-~~~k~-~~-~~~~~~-----~kkin~---aVFPg~qggp~~h~I---AAkAVaf 325 (490)
T 3ou5_A 263 TTHKTLRG--ARS-GLIFYRKGVKA-VDPKT-GR-EIPYTF-----EDRINF---AVFPSLQGGPHNHAI---AAVAVAL 325 (490)
T ss_dssp ESSSTTCS--CSC-EEEEEECSEEE-ECC---CC-EEECCC-----HHHHHH---HHTTTTCSSCCHHHH---HHHHHHH
T ss_pred cccccccC--CCc-eEEEecccccc-ccccc-cc-hhHHHH-----HHHHHh---hcCccccccchHHHH---HHHHHHH
Confidence 9999 455 875 88888876421 11100 00 000000 000000 0120 1233333333 6655666
Q ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhC
Q 037063 421 DHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRH 500 (588)
Q Consensus 421 ~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~ 500 (588)
.....-......+++...++.|.+.|.+. +++|+... .....+.+.+.... ++...+++.|++.
T Consensus 326 ~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~----------G~~vvsGg---TdnHlvLvDl~~~g---~tG~~ae~~Le~a 389 (490)
T 3ou5_A 326 KQACTPMFREYSLQVLKNARAMADALLER----------GYSLVSGG---TDNHLVLVDLRPKG---LDGARAERVLELV 389 (490)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHHT----------TCEEGGGS---CSSSEEEEECGGGT---CCHHHHHHHHHHT
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHHHhC----------CCeeecCC---CCceEEEEeccccC---CCHHHHHHHHHHc
Confidence 54333224667788888888888888874 45666432 34567777775532 6788899999999
Q ss_pred CcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCC----CCHHHHHHHHHHHHHhhh
Q 037063 501 NISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCL----TNFEDTYRLWAFVSRFLD 567 (588)
Q Consensus 501 gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~----~t~eDv~~li~~l~~~l~ 567 (588)
||.+---. . |+- . ...-.+.|||..... -.++|+..+.++|.+.|+
T Consensus 390 gItvNkN~-i-P~D--~-----------------sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 390 SITANKNT-C-PGD--R-----------------SAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp TEECEEEC-C-TTC--C-----------------CSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CcEECCCC-C-CCC--C-----------------CCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 99763210 0 100 0 001112799986322 267999999999988775
No 227
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.67 E-value=3.2e-15 Score=159.81 Aligned_cols=334 Identities=12% Similarity=0.047 Sum_probs=203.1
Q ss_pred CCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHH
Q 037063 110 NNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESK 183 (588)
Q Consensus 110 ~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~ 183 (588)
.+..|+|.++. |+.++.+++++.+.+... .. ++. ..+...+
T Consensus 50 ~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~---~~-----------------------------~~~-~~~~~~~ 96 (424)
T 2e7u_A 50 DGNRYLDYVMSWGPLILGHAHPKVLARVRETLERG---LT-----------------------------FGA-PSPLEVA 96 (424)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTC---SC-----------------------------CSS-CCHHHHH
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhC---CC-----------------------------CCC-CCHHHHH
Confidence 56779998753 456788888886665321 00 000 1456678
Q ss_pred HHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhC-CCCCCCeE-EEcCCCchhHHHHHHHHH----------HhcCC--
Q 037063 184 IRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESY-PFYSNPRL-LTVYDHENEAAALMIESS----------KKRGA-- 249 (588)
Q Consensus 184 ~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~-~~~~gd~l-l~~~e~~s~~~~~~~~~a----------~~~G~-- 249 (588)
++++++++++ .++ .|+||+|+++|+.+++... .+..+++| +....||......+ ..+ ...|+
T Consensus 97 l~~~l~~~~~-~~~--~v~~~~~g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~-~~~~~~~~~~~~p~~~g~~~ 172 (424)
T 2e7u_A 97 LAKKVKRAYP-FVD--LVRFVNSGTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLL-VEAGSGALTLGVPSSAGVPE 172 (424)
T ss_dssp HHHHHHHHCT-TCC--EEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGS-EECCSSSCCBCEESSTTCCH
T ss_pred HHHHHHHhCC-CCC--EEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHH-HhcCCcccccCCCCCCCCCC
Confidence 9999999986 444 4999999999999888751 02344664 45555654111110 000 01122
Q ss_pred ----EEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCC
Q 037063 250 ----RVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDAT 320 (588)
Q Consensus 250 ----~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa 320 (588)
.+..++. .|.++|++++++. .+++++|++..+++.+|.+.| +++| ++ +++|+++|+|.+
T Consensus 173 ~~~~~~~~~~~------~d~~~le~~l~~~-----~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv 240 (424)
T 2e7u_A 173 EYAKLTLVLEY------NDPEGLREVLKRR-----GEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEV 240 (424)
T ss_dssp HHHTTEEEECT------TCHHHHHHHHHHH-----GGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECT
T ss_pred ccCCceEeCCC------CCHHHHHHHHHhC-----CCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecC
Confidence 3444443 3789999988720 135778888777777999998 8899 89 999999999999
Q ss_pred CcCCCCCCCC---CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccccccc
Q 037063 321 ALGSKDMDTL---GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDES 397 (588)
Q Consensus 321 ~~~~~d~~~l---~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~ 397 (588)
+. +...... +.....+|++ |++|.+|. +..+|++++++++++.+.+....
T Consensus 241 ~~-g~~~g~~~~~~~~~~~~di~--s~sK~l~~-G~~~G~~~~~~~~~~~~~~~~~~----------------------- 293 (424)
T 2e7u_A 241 MT-GFRLAFGGATELLGLKPDLV--TLGKILGG-GLPAAAYAGRREIMEKVAPLGPV----------------------- 293 (424)
T ss_dssp TT-TTTSSTTHHHHHHTCCCSEE--EECGGGGT-TSSCEEEEECHHHHTTBTTTSSB-----------------------
T ss_pred cc-ccccchhHHHHHhCCCcchh--hhhhhhhC-CcceEEEEEcHHHHhhhcccCCc-----------------------
Confidence 87 2111111 0001237865 77898874 45689999999887776542100
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEE
Q 037063 398 SQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLA 477 (588)
Q Consensus 398 ~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~ 477 (588)
+ ..+|.+...+ ..++..++|+.+++. +.+.++++++.+++++.|.++.... +... .+. ..|.++.
T Consensus 294 -~-~~~t~~~~~~-~~aaa~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~---~~~~-~~~------~~g~~~~ 358 (424)
T 2e7u_A 294 -Y-QAGTLSGNPL-AMAAGLATLELLEEN--PGYYAYLEDLGARLEAGLKEVLKEK---GLPH-TVN------RVGSMIT 358 (424)
T ss_dssp -C-CCCTTCSCHH-HHHHHHHHHHHHHHC--THHHHHHHHHHHHHHHHHHHHHHHT---TCCC-EEE------EETTEEE
T ss_pred -c-cCCCCCCCHH-HHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHhC---CCce-EEE------eeceEEE
Confidence 0 1112121111 124555777776652 6678888888899988887752000 1111 111 2466777
Q ss_pred EEeecCCC---------CCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCC
Q 037063 478 FNVFDWNG---------TRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGC 548 (588)
Q Consensus 478 f~~~~~~g---------~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~ 548 (588)
+.+.+... .......+.+.|.++||.++.|. .+ .+|++ +
T Consensus 359 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----------------------------~~--~~~~~--~ 406 (424)
T 2e7u_A 359 VFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSN----------------------------FE--AAFLS--V 406 (424)
T ss_dssp EESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSS----------------------------SS--CEECC--T
T ss_pred EEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccC----------------------------CC--ceEee--c
Confidence 77643100 00113456666668999987651 11 45655 6
Q ss_pred CCCHHHHHHHHHHHHHhh
Q 037063 549 LTNFEDTYRLWAFVSRFL 566 (588)
Q Consensus 549 ~~t~eDv~~li~~l~~~l 566 (588)
..+.+|++++++.|+++|
T Consensus 407 ~~t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 407 AHREEDVEKTLEALRKAL 424 (424)
T ss_dssp TCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHhC
Confidence 789999999999998754
No 228
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.65 E-value=4e-15 Score=158.47 Aligned_cols=325 Identities=11% Similarity=0.002 Sum_probs=190.0
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCC----CCeEEEcCCCchhHHHHHHHHHHhcCCEEEE
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYS----NPRLLTVYDHENEAAALMIESSKKRGARVSS 253 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~----gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~ 253 (588)
..+.+.+...+.+++|.+. ....++++|+|.+.++++.+. .++ ++.|+.+...|.... +.+...|+..++
T Consensus 97 ~~~e~~~~~~~~~~lGlp~-~~~~~lV~GaT~~~~a~~L~a-ar~~~~~~~~viv~r~aHkSv~----kAl~l~Gl~p~~ 170 (450)
T 3bc8_A 97 NKITNSLVLNVIKLAGVHS-VASCFVVPMATGMSLTLCFLT-LRHKRPKAKYIIWPRIDQKSCF----KSMVTAGFEPVV 170 (450)
T ss_dssp HHHHHHHHHHHHHHHTCTT-CCEEEEESSCHHHHHHHHHHH-HHHHCTTCCEEEEECCCCHHHH----HHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHhCCCCC-CceEEEECCHHHHHHHHHHHH-cchhhcCCCEEEEECCcHHHHH----HHHHHcCCeeEE
Confidence 4677889999999999964 456799999986655554443 233 677765555554233 344567999988
Q ss_pred Eecc--CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEEeCCCcCCCC-CCC
Q 037063 254 AEFA--WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLLDATALGSKD-MDT 329 (588)
Q Consensus 254 v~~~--~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~d-~~~ 329 (588)
++.. .+.+.+|+++|+++|.+. ..+.+.+|+.+...+.+|...|+++| ++|+++|++++||+|+.+-.. ..+
T Consensus 171 v~~~~~~~~~~id~~~le~aI~~~----~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~ 246 (450)
T 3bc8_A 171 IENVLEGDELRTDLKAVEAKIQEL----GPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMH 246 (450)
T ss_dssp ECCEEETTEEECCHHHHHHHHHHH----CGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHH
T ss_pred EEeeecCccCCcCHHHHHHHHHhc----CCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHh
Confidence 8662 146789999999999731 11244555555444446799999999 999999999999999776310 011
Q ss_pred C---CCCCCCCcEEEeccCccCCCCCCceEEEEEeCc-chhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 330 L---GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKS-SASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 330 l---~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~-~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
+ .+...++|+++.|.||+++. |+|.+++++++. .++.+...+.+. ..++|
T Consensus 247 l~~~a~~~~~AD~~v~S~HK~l~a-~~~~~~l~~rd~~~~~~~~~~~~g~-------------------------~s~Sp 300 (450)
T 3bc8_A 247 LIQQGARVGRIDAFVQSLDKNFMV-PVGGAIIAGFNEPFIQDISKMYPGR-------------------------ASASP 300 (450)
T ss_dssp HHHHHHHHSCCCEEEEEHHHHHSC-CSSCEEEEESCHHHHHHHHHHSCSC-------------------------BCSHH
T ss_pred HHHHHhcccCCCEEEECCccCCCc-hhccEEEEecCHHHHHHHHHHhhcC-------------------------CcccH
Confidence 1 00001499999999998775 999999999753 333332222110 01111
Q ss_pred CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCC-
Q 037063 406 SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWN- 484 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~- 484 (588)
+ ..+...+..+-.-|+.++.++...+++++++.|.++.-. -+.++++... .+.-.++.+....
T Consensus 301 s-------L~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~------~g~~~l~~~~---~~~~~~~~l~~~~~ 364 (450)
T 3bc8_A 301 S-------LDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEA------HNERLLQTPH---NPISLAMTLKTIDG 364 (450)
T ss_dssp H-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------TTCCBCCCTT---CSSEEEEECTTTSS
T ss_pred H-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh------cCceecCCcc---CCCcceeecccccc
Confidence 1 112233322222346666777788899999999875200 0455555321 1111223332110
Q ss_pred CCCcCHHHHHHHHHhCCc---Eecc-ccc---cCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHH
Q 037063 485 GTRIDPALVQKLADRHNI---SLSC-GFL---QNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYR 557 (588)
Q Consensus 485 g~~i~~~~v~~~l~~~gI---~v~~-G~~---c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~ 557 (588)
....++..+.-.+...|+ .+.+ |.. +...+ +.| ...-.......|-+.++..++.+|+++
T Consensus 365 ~~~~D~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l-~~~------------gi~~E~~~~~~i~~~~sig~~~~di~~ 431 (450)
T 3bc8_A 365 HHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTF-RGF------------MSHADNYPCAYLNAAAAIGMKMQDVDL 431 (450)
T ss_dssp SSSCHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEE-ETT------------TTTSSCCSSCEEEEECCTTCCHHHHHH
T ss_pred cccCCCceeEEEecCCCCccceeeecccccchhHHHH-HHc------------CCeeecCCCCcEEEEecCCCCHHHHHH
Confidence 001345555444444454 2220 000 00000 000 000001222388888899999999999
Q ss_pred HHHHHHHhhh
Q 037063 558 LWAFVSRFLD 567 (588)
Q Consensus 558 li~~l~~~l~ 567 (588)
|++.|+++++
T Consensus 432 l~~~L~~~~~ 441 (450)
T 3bc8_A 432 FIKRLDKCLN 441 (450)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999754
No 229
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.59 E-value=6.4e-14 Score=149.02 Aligned_cols=292 Identities=10% Similarity=0.109 Sum_probs=178.1
Q ss_pred HHHHHHHHHh-CC-----CCCCceEEEecCHHHHHHHHHHhCCCC--CCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEE
Q 037063 183 KIRKRIMDFM-NI-----SEDDYTLVFTANQSSAFKLLAESYPFY--SNPRLLTVYDHENEAAALMIESSKKRGARVSSA 254 (588)
Q Consensus 183 ~~r~~ia~~l-ga-----~~~e~~vvft~g~T~al~lv~~s~~~~--~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v 254 (588)
++|+.|++++ +. ++++.+|+.|.|+++|+.+++..+ .. + |+|++....+.+. ...++..|++++.+
T Consensus 76 ~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l-~~~~~-d~Vlv~~P~y~~~----~~~~~~~g~~~~~v 149 (405)
T 3k7y_A 76 DFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFL-KMLNV-ETLYVTNPPYINH----VNMIESRGFNLKYI 149 (405)
T ss_dssp HHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHH-HTTTC-CEEEEESSCCHHH----HHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHH-HhcCC-CEEEEeCCCCHhH----HHHHHHcCCeEEEE
Confidence 6777777765 21 223224799999999999998877 44 7 9987666654422 34567789999999
Q ss_pred ec-cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCC-CCCCCccCCHHH---H-HHHHHcCcEEEEeCCCc-CCCC-
Q 037063 255 EF-AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQ-SKVTGARYSYMW---M-SVAAEKGWHVLLDATAL-GSKD- 326 (588)
Q Consensus 255 ~~-~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~-sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~~-~~~d- 326 (588)
|+ +..+..+|.++|++.+.+ .++++++++... +||||..++.++ | ++|+++|++||+|.+.. +..+
T Consensus 150 ~~~~~~~~~~d~~~l~~~l~~------~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~ 223 (405)
T 3k7y_A 150 NFFDYNLIDINYDLFLNDLRN------IPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTN 223 (405)
T ss_dssp CCEETTTTEECHHHHHHHHHH------SCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSS
T ss_pred eccccccCCcCHHHHHHHHHh------CCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCC
Confidence 98 423578999999999972 135677777654 899999999887 4 67899999999998732 1110
Q ss_pred CC----CC-CC-CCCCCcEEEeccCccCCCCCCceEEEEE---eCcchhcccCCCCCCCceEeeecCCCccccccccccc
Q 037063 327 MD----TL-GL-SLFKPDFLICSFYKIFGENPSGFGCLFV---KKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDES 397 (588)
Q Consensus 327 ~~----~l-~l-~~~~~D~vv~S~~K~~G~~P~G~G~L~v---~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~ 397 (588)
.. .+ .+ +...--+++.|+.|.||++..++|++++ ++++++.+...... . .
T Consensus 224 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~---~--------------~---- 282 (405)
T 3k7y_A 224 LEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCF---I--------------V---- 282 (405)
T ss_dssp TTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHH---H--------------H----
T ss_pred cccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHH---H--------------H----
Confidence 00 00 00 1111346788999999865677999875 23333322211000 0 0
Q ss_pred ccccCCCCCccchhhHHHHHHHHHH-------HHHhCHHHHHHHHHHHHHHHHHHHH----cccCCCCCCCCC-eEEEeC
Q 037063 398 SQSKFPESSISGVSSKLVECKGLDH-------ADALGLILISNRARYLINWLANALM----NLHHPHSETGIP-LVRIYG 465 (588)
Q Consensus 398 ~f~e~GT~~~~~~~~~~al~~aL~~-------l~~~G~~~i~~r~~~L~~~l~~~L~----~L~h~~~~~g~~-~v~i~~ 465 (588)
+. ....++..+. .++..+|.. .+. +..+.++.+..++++.+.|. ++ |.+ .++++.
T Consensus 283 ~~-~~~~~~~~~q---~~~~~~l~~~~l~~~~~~~--l~~~~~~~~~~R~~l~~~L~~~~~~~-------g~~~~~~~~~ 349 (405)
T 3k7y_A 283 RK-FYSSPVIHTN---RILCQLLNNQNLKLNWIKE--LSQLSQRITNNRILFFNKLETYQKKY-------NLNYDWNVYK 349 (405)
T ss_dssp HT-TTSSCCHHHH---HHHHHHHHCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHGGGG-------TCCCCGGGGS
T ss_pred hc-ccCCCcHHHH---HHHHHHhCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhhhc-------CCCCCCcccc
Confidence 00 0001111110 122233321 111 35566778888889999998 75 211 122222
Q ss_pred CCCCCCcccEEEEEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEe
Q 037063 466 PKVMFDRGPSLAFNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAA 545 (588)
Q Consensus 466 p~~~~~rg~iv~f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvS 545 (588)
.+|++..|. + ++.+.+.++ .++||.+.+| . |+|
T Consensus 350 -----p~gg~f~~~--~-----l~~~~~~~L-~~~gV~v~p~---------------------------------~-Ris 382 (405)
T 3k7y_A 350 -----KQRGLFSFV--P-----LLAKIAEHL-KTHHIYIINN---------------------------------G-RIN 382 (405)
T ss_dssp -----SCCSSEEEC--G-----GGGGGTTTT-TTTTEECCTT---------------------------------S-EEE
T ss_pred -----CCceEEEec--C-----CCHHHHHHH-HHCCEeecCC---------------------------------C-eEE
Confidence 345655442 2 223344455 7889987643 1 899
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhh
Q 037063 546 LGCLTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 546 lg~~~t~eDv~~li~~l~~~l~~ 568 (588)
++.. +.++|+++++.|++++++
T Consensus 383 ~a~~-~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 383 VSGI-TKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp GGGC-CTTHHHHHHHHHHHHHHC
T ss_pred Eecc-CHHHHHHHHHHHHHHHhh
Confidence 8633 558999999999998764
No 230
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.55 E-value=1.5e-13 Score=147.48 Aligned_cols=336 Identities=12% Similarity=0.073 Sum_probs=196.2
Q ss_pred CCCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|.++.-|||+.+. |--.+.+++++.+.+..... . .. + ....
T Consensus 83 D~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~--~---------------------~~-~---------~~~~ 129 (454)
T 4ao9_A 83 DADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGIN--L---------------------TG-H---------NLLE 129 (454)
T ss_dssp ETTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSC--C---------------------CS-E---------ESSH
T ss_pred ECCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCC--c---------------------cC-C---------cHHH
Confidence 3468899998654 44567888887666533110 0 00 0 1223
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCC-CeEE-EcCCCchhHHHHHHHHHHhc--CCEEEEEecc
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSN-PRLL-TVYDHENEAAALMIESSKKR--GARVSSAEFA 257 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~g-d~ll-~~~e~~s~~~~~~~~~a~~~--G~~v~~v~~~ 257 (588)
.++.++|++.+.- -+.|.|++++|+|+..+++....-.| ++|+ ....||......+ ...... ...+..+|.
T Consensus 130 ~~lae~l~~~~p~---~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~-~~~~~~~~~~~~~~~p~- 204 (454)
T 4ao9_A 130 GRLARLICERFPQ---IEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFG-ARPSPTTVPFDFLVLPY- 204 (454)
T ss_dssp HHHHHHHHHHSTT---CSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBS-SSBCTTSCCSEEEEECT-
T ss_pred HHHHHHHHHhCCC---CCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCcccccc-ccccCccCCCCcccCCC-
Confidence 4677778888753 23599999999998877654311123 3455 5556664221110 000001 123333333
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCcCC--C--CCC
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATALGS--K--DMD 328 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~~~--~--d~~ 328 (588)
-|.+.+++.|.+ ..+++..|++.-+....|.+.| ++.| ++|+++|+++|+|.++..- . -..
T Consensus 205 -----nd~~~l~~~l~~-----~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~G~~~a~e 274 (454)
T 4ao9_A 205 -----NDAQTARAQIER-----HGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTSRLAPHGLAN 274 (454)
T ss_dssp -----TCHHHHHHHHHH-----TGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGGGGSTTCHHH
T ss_pred -----chHHHHHHHHhh-----cCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcCCCccccchh
Confidence 267889988873 1245788888888888999998 8889 9999999999999998641 0 011
Q ss_pred CCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCcc
Q 037063 329 TLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSIS 408 (588)
Q Consensus 329 ~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~ 408 (588)
.++ ..||+++ +-|.+|. ...+|++..++++++.+.+.... .+ ..||.+-.
T Consensus 275 ~~g---v~PDi~t--~gK~lgg-G~Piga~~~~~ei~~~~~~~~~~-----------------------~~-h~~T~~gn 324 (454)
T 4ao9_A 275 KLG---IRSDLTT--LGKYIGG-GMSFGAFGGRADVMALFDPRTGP-----------------------LA-HSGTFNNN 324 (454)
T ss_dssp HHT---CCCSEEE--EEGGGGT-TSSCEEEEECHHHHGGGCTTTCS-----------------------CC-CCCTTTTC
T ss_pred ccC---CCCcEEE--eccccCC-CCcceeeeeHHHHHHHHhhccCC-----------------------cc-ccCCCCCC
Confidence 223 2489875 4575552 34589999999998877543210 00 23343332
Q ss_pred chhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCCC--
Q 037063 409 GVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNGT-- 486 (588)
Q Consensus 409 ~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g~-- 486 (588)
.+ ++.+|+..++.+--+.+.+++.++.++|+++|.++.... +.+ ..+- ..|.++.+.+.+.+-.
T Consensus 325 Pl----a~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~---~~~-~~vr------g~G~m~gi~f~~~~~~~~ 390 (454)
T 4ao9_A 325 VM----TMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANE---GVA-MQFT------GIGSLMNAHFVQGDVRSS 390 (454)
T ss_dssp HH----HHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---TBS-CEEE------EETTEEEEESCCSCCCSG
T ss_pred HH----HHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhC---CCC-EEEe------eeceEEEEEEecCCCCCH
Confidence 22 233444444433336677888888888888887652100 111 1121 2356666655321100
Q ss_pred ----CcCHH---HHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHH
Q 037063 487 ----RIDPA---LVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLW 559 (588)
Q Consensus 487 ----~i~~~---~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li 559 (588)
..+.. .+...+-++||.+++. + .+.+|+ ..|+||||+++
T Consensus 391 ~~~~~~d~~~~~~~~~~ll~~Gv~~~p~------------------------------~--~~~~s~--~~T~~dId~~l 436 (454)
T 4ao9_A 391 EDLAAVDGRLRQLLFFHLLNEDIYSSPR------------------------------G--FVVLSL--PLTDADIDRYV 436 (454)
T ss_dssp GGGTTCCHHHHHHHHHHHHHTTEECCTT------------------------------C--EEECCT--TCCHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHCCEEEcCC------------------------------C--CEEEeC--CCCHHHHHHHH
Confidence 11222 2334455678887532 1 455554 46999999999
Q ss_pred HHHHHhhhhh
Q 037063 560 AFVSRFLDAD 569 (588)
Q Consensus 560 ~~l~~~l~~~ 569 (588)
++|+++|++.
T Consensus 437 ~al~~~l~~~ 446 (454)
T 4ao9_A 437 AAIGSFIGGH 446 (454)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhc
Confidence 9999998863
No 231
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.49 E-value=1.2e-12 Score=137.85 Aligned_cols=326 Identities=12% Similarity=0.006 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCC---C-CeEEEcCCCchhHHHHHHHHHHhcCCEEEEEe
Q 037063 180 LESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYS---N-PRLLTVYDHENEAAALMIESSKKRGARVSSAE 255 (588)
Q Consensus 180 ~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~---g-d~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~ 255 (588)
+-+.+-..+.+.+|.+.. ...++++|+|.++..++.+. .++ | ++|+.+...|-+.+.. +...|++.++++
T Consensus 117 ltn~l~ld~L~~~G~~~~-~~~flVnGsTgg~lamilaa-~r~~rpg~d~VIvpRn~HKSv~kA----liL~Gl~Pv~V~ 190 (501)
T 3hl2_A 117 ITNSLVLDIIKLAGVHTV-ANCFVVPMATGMSLTLCFLT-LRHKRPKAKYIIWPRIDQKSCFKS----MITAGFEPVVIE 190 (501)
T ss_dssp HHHHHHHHHHHHTTCTTC-CEEEEESSCHHHHHHHHHHH-HHHHCTTCCEEEEECCCCHHHHHH----HHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCCC-CcEEEECcHHHHHHHHHHHH-cCcccCCCCEEEEecchHHHHHHH----HHHcCCeEEEEe
Confidence 333344444455698743 36899999997666555544 443 4 7877665544434444 345699999997
Q ss_pred cc--CCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCC-CCccCCHHHH-HHHHHcCcEEEEeCCCcCCC----C-
Q 037063 256 FA--WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKV-TGARYSYMWM-SVAAEKGWHVLLDATALGSK----D- 326 (588)
Q Consensus 256 ~~--~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~-tG~~~pl~~I-~~a~~~g~~vvvDaa~~~~~----d- 326 (588)
.. .+...+|+++|+++|++. .....+++++..++. .|...|+++| ++||++|++++||+|+.+-. +
T Consensus 191 p~~d~~~~~id~e~le~aI~e~-----ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~l 265 (501)
T 3hl2_A 191 NVLEGDELRTDLKAVEAKVQEL-----GPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHL 265 (501)
T ss_dssp EEEETTEEEECHHHHHHHHHHH-----CGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHH
T ss_pred eeecccccCCCHHHHHHHHHhc-----CCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhh
Confidence 63 245789999999999831 123444444444433 4577999999 99999999999999966631 0
Q ss_pred -CCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCc-chhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 327 -MDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKS-SASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 327 -~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~-~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
...+.+ -++|+++.|.||++-. |.|.|+++.+++ .++.+...+.| |
T Consensus 266 p~sA~~~--GrAD~vVqS~HK~llv-pIGG~ii~~~d~e~l~~~~~~yPG-----------------------------r 313 (501)
T 3hl2_A 266 IQQGARV--GRIDAFVQSLDKNFMV-PVGGAIIAGFNDSFIQEISKMYPG-----------------------------R 313 (501)
T ss_dssp HHHHHHH--SCCCEEEEEHHHHHCC-CSSCEEEEESCHHHHHHHHHTSCS-----------------------------C
T ss_pred HHHHHhc--CCCcEEEeccccccee-ecCceEEEeCCHHHHHHHHHhCCC-----------------------------C
Confidence 011111 1399999999996654 888777777763 44544333322 1
Q ss_pred CCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCC
Q 037063 405 SSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWN 484 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~ 484 (588)
.+-... +.+..++..+-.-|+.++.++...+++||+++|.++.... +-+++.-+ ...=-+++.+....
T Consensus 314 ~S~Sps---ldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~------ge~ll~~~---~n~is~a~tl~~~~ 381 (501)
T 3hl2_A 314 ASASPS---LDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAY------NERLLHTP---HNPISLAMTLKTLD 381 (501)
T ss_dssp BCSHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------TCCBCCCT---TCSSEEEEECTTSC
T ss_pred CCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------ChhhcCCC---CCceeEEEeccccc
Confidence 111111 3344566666666789999999999999999999874322 11222211 11123444443321
Q ss_pred C-CCcCHHHHHHHHHhCCcE----eccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHH
Q 037063 485 G-TRIDPALVQKLADRHNIS----LSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLW 559 (588)
Q Consensus 485 g-~~i~~~~v~~~l~~~gI~----v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li 559 (588)
. ..-....+-..|-..+|. |..|..-..+... +.. .+......-.+++.+.-..-.+.+|||.|+
T Consensus 382 ~~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~---------f~~-~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~ 451 (501)
T 3hl2_A 382 EHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYT---------FRG-FMSHTNNYPCAYLNAASAIGMKMQDVDLFI 451 (501)
T ss_dssp TTTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEE---------ESS-TTTTSSCCSSCEEEEECCTTCCHHHHHHHH
T ss_pred ccccccHHHHHHHHHhcCCCcceeecCCCceEECCee---------ecC-cccCCCCCCchHHHHHHHcCCCHHHHHHHH
Confidence 1 112244556666666663 1222100000000 000 000000011238888888888999999999
Q ss_pred HHHHHhhhhhh
Q 037063 560 AFVSRFLDADF 570 (588)
Q Consensus 560 ~~l~~~l~~~~ 570 (588)
+.|.+.+.+-.
T Consensus 452 ~~l~~~~~~~~ 462 (501)
T 3hl2_A 452 KRLDRCLKAVR 462 (501)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99998876543
No 232
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.19 E-value=5.4e-15 Score=159.66 Aligned_cols=300 Identities=10% Similarity=-0.012 Sum_probs=180.7
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC-CCCCCeEE-EcCCCchhHHHHHHHHHHhcCC--EEEE
Q 037063 178 SELESKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP-FYSNPRLL-TVYDHENEAAALMIESSKKRGA--RVSS 253 (588)
Q Consensus 178 ~~~~~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~-~~~gd~ll-~~~e~~s~~~~~~~~~a~~~G~--~v~~ 253 (588)
.+...++.++|+++++ ..+ .++|++++|+|+..++.... +..+++|+ ....||......+.. ....|+ .+..
T Consensus 139 ~~~~~~Lae~L~~~~p-~~~--~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg-~~~~g~~~~~~~ 214 (465)
T 2yky_A 139 TENEALFAEAVCDRFP-SID--LVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASG-HAPTNAPYHVVL 214 (465)
Confidence 3455688889999985 233 39999999999998887642 23346655 555666533222100 012344 2333
Q ss_pred EeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeCCCcCCCCCC
Q 037063 254 AEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDATALGSKDMD 328 (588)
Q Consensus 254 v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~~~~d~~ 328 (588)
++. -|+++|+++|++ . .+++++|++..+.+.+|.+.| ++.| ++|+++|+++|+|.++. .. ..
T Consensus 215 ~~~------~d~~~l~~~l~~----~-~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r-~g 281 (465)
T 2yky_A 215 GVY------NDVEGTADLLKR----H-GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SR-LS 281 (465)
Confidence 332 267888888862 1 146888888877777999888 8888 99999999999999987 31 11
Q ss_pred CC---CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCC
Q 037063 329 TL---GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPES 405 (588)
Q Consensus 329 ~l---~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~ 405 (588)
.. +.....+|++ ++.|.+|. +..+|++++++++++.+.+...+ .+ + ..+|.
T Consensus 282 ~~~a~~~~gv~pDi~--t~sK~lg~-G~piG~v~~~~~i~~~l~~~~~g---~~-------------------~-~~~T~ 335 (465)
T 2yky_A 282 GGGAQEMLGISADLT--TLGKYIGG-GMSFGAFGGRRDLMERFDPARDG---AF-------------------A-HAGTF 335 (465)
Confidence 11 1111237755 67898883 34589999999988877652111 00 0 01111
Q ss_pred CccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCC-
Q 037063 406 SISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWN- 484 (588)
Q Consensus 406 ~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~- 484 (588)
+...+ ..++..++|+.+++ +.+.++++++.++++++|.++.. ...+... ....|.++.|.+.+..
T Consensus 336 ~~npl-a~aAa~aaL~~l~~---~~~~~~~~~~~~~l~~~L~~~~~--------~~~~~~~--v~g~G~~~~i~~~~~~~ 401 (465)
T 2yky_A 336 NNNIL-TMSAGHAALTQIYT---RQAASDLSASGDRFRANLNRIAV--------ENQAPLQ--FTGLGSLGTIHFSRAPI 401 (465)
Confidence 11111 01344466777655 45788888899999998887521 1111111 1135677777654300
Q ss_pred ---CC-----CcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHH
Q 037063 485 ---GT-----RIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTY 556 (588)
Q Consensus 485 ---g~-----~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~ 556 (588)
+. .-....+.+.|.++||.+.++. .+ . +.+..|.|||+
T Consensus 402 ~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~~----------------------------~~--~----~s~~~t~edid 447 (465)
T 2yky_A 402 RSAGDVRAADQQLKELFFFHMLRKGIYLAPRG----------------------------MY--A----LSLEIADAGRD 447 (465)
Confidence 00 0012334555556888876541 11 2 44668999999
Q ss_pred HHHHHHHHhhhh
Q 037063 557 RLWAFVSRFLDA 568 (588)
Q Consensus 557 ~li~~l~~~l~~ 568 (588)
++++.|.+++++
T Consensus 448 ~~l~~l~~~l~~ 459 (465)
T 2yky_A 448 AFAEALADFIGE 459 (465)
Confidence 999999988765
No 233
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.42 E-value=3.2e-12 Score=136.33 Aligned_cols=345 Identities=15% Similarity=0.088 Sum_probs=197.7
Q ss_pred cCCCCCCeeeecCCCCCCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHHHH
Q 037063 105 FHLSLNNYVCFDYIGHGLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELESKI 184 (588)
Q Consensus 105 ~~l~~~~~vyLD~a~~gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~ 184 (588)
|..++.=-+|.|-.|-.+..+.|.++....+.... .|+ | +.. .| ..+.
T Consensus 45 ~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~---~~~----------------Y----~p~---~G------~p~l 92 (420)
T 4h51_A 45 PKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNL---DYE----------------Y----LPI---SG------YQPF 92 (420)
T ss_dssp SCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTC---CCC----------------C----CCT---TC------CHHH
T ss_pred CCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCC---CCC----------------C----CCc---CC------hHHH
Confidence 33333445899999998888888887532221110 110 0 010 01 1366
Q ss_pred HHHHHHHh-CC--CCCCceEEEecCHHHHHHHHHHhCC---CCCCCeEEEcCCCchhHHHHHHHHHHhcCCE-EEEEec-
Q 037063 185 RKRIMDFM-NI--SEDDYTLVFTANQSSAFKLLAESYP---FYSNPRLLTVYDHENEAAALMIESSKKRGAR-VSSAEF- 256 (588)
Q Consensus 185 r~~ia~~l-ga--~~~e~~vvft~g~T~al~lv~~s~~---~~~gd~ll~~~e~~s~~~~~~~~~a~~~G~~-v~~v~~- 256 (588)
|+.+++++ |- +.+....+-|.|+|.|+...+..+. ..+||+|+++..+..+.. ...+..|++ |...+.
T Consensus 93 r~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~----~i~~~aG~~~V~~~~~~ 168 (420)
T 4h51_A 93 IDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHY----GVVKAAGWKNICTYAYY 168 (420)
T ss_dssp HHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHH----HHHHHTTCCCEEEEECE
T ss_pred HHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHH----HHHHHcCCeEEEeeccc
Confidence 77777764 32 2222234558899988876654331 578999776555554333 233456776 444433
Q ss_pred cCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHH---H-HHHHHcCcEEEEeCCC-cCCC-C--CC
Q 037063 257 AWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMW---M-SVAAEKGWHVLLDATA-LGSK-D--MD 328 (588)
Q Consensus 257 ~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~---I-~~a~~~g~~vvvDaa~-~~~~-d--~~ 328 (588)
+..+..++.+.+.+.+.. ..++++++.++.++||||..++.++ | ++|++++++++.|.+- .+.. + ..
T Consensus 169 ~~~~~~~d~~~~~~~l~~-----~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~ 243 (420)
T 4h51_A 169 DPKTVSLNFEGMKKDILA-----APDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTD 243 (420)
T ss_dssp EGGGTEECHHHHHHHHHH-----SCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHH
T ss_pred cccccCCCHHHHHHHHhc-----cCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccc
Confidence 224556788888888762 2367889999999999999999876 4 7899999999999882 2210 0 00
Q ss_pred CC----CCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCC
Q 037063 329 TL----GLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPE 404 (588)
Q Consensus 329 ~l----~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT 404 (588)
.. ..+....-+++.|+.|.||++..++|++.+..+..+....... ... .+ . +. ....
T Consensus 244 ~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~----~l~---------~~-~----r~-~~s~ 304 (420)
T 4h51_A 244 AYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKS----VMD---------SL-I----RE-EYTC 304 (420)
T ss_dssp THHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHH----HHH---------HH-H----HT-TTSS
T ss_pred hHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHH----HHH---------Hh-h----hc-ccCc
Confidence 00 0011113467789999888545569999988776543321110 000 00 0 00 0111
Q ss_pred CCccchhhHHHHHHHHH------HHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCe-EEEeCCCCCCCcccEEE
Q 037063 405 SSISGVSSKLVECKGLD------HADALGLILISNRARYLINWLANALMNLHHPHSETGIPL-VRIYGPKVMFDRGPSLA 477 (588)
Q Consensus 405 ~~~~~~~~~~al~~aL~------~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~-v~i~~p~~~~~rg~iv~ 477 (588)
++..+. .++...+. .+.+ -++.+.+|++..++.|++.|.++ |.++ +..+. .++++++
T Consensus 305 ~p~~~a---~~~~~~l~d~~l~~~~~~-~~~~m~~r~~~~R~~l~~~L~~~-------g~~~~~~~i~-----~q~GmF~ 368 (420)
T 4h51_A 305 PPAHGA---RLAHLILSNNELRKEWEA-ELSAMAERIRTMRRTVYDELLRL-------QTPGSWEHVI-----NQIGMFS 368 (420)
T ss_dssp CCHHHH---HHHHHHHHSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT-------TCSSCCTHHH-----HCCSSEE
T ss_pred chHHHH---HHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh-------CCCCCCCeec-----CCCceEE
Confidence 111111 11112221 1111 15778888899999999999986 2221 11111 2344444
Q ss_pred EEeecCCCCCcCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHH
Q 037063 478 FNVFDWNGTRIDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYR 557 (588)
Q Consensus 478 f~~~~~~g~~i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~ 557 (588)
| .+ ++++.+ ++|+++||.+-. .| |||+.. -|.+.|++
T Consensus 369 ~--~g-----ls~e~v-~~L~e~~Vy~~~------------------------------~g----Ris~Ag-l~~~ni~~ 405 (420)
T 4h51_A 369 F--LG-----LSKAQC-EYCQNHNIFITV------------------------------SG----RANMAG-LTHETALM 405 (420)
T ss_dssp E--CC-----CCHHHH-HHHHHTTEECCT------------------------------TC----EEEGGG-CCHHHHHH
T ss_pred e--cC-----cCHHHH-HHHHhCCEEEcC------------------------------CC----EEEecc-CCHHHHHH
Confidence 3 23 567766 466788997642 22 888753 37799999
Q ss_pred HHHHHHHhhhh
Q 037063 558 LWAFVSRFLDA 568 (588)
Q Consensus 558 li~~l~~~l~~ 568 (588)
++++|.+.++.
T Consensus 406 ~a~aI~~vvr~ 416 (420)
T 4h51_A 406 LAQTINDAVRN 416 (420)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHHH
Confidence 99999998765
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.38 E-value=1.2e-10 Score=125.19 Aligned_cols=356 Identities=11% Similarity=0.022 Sum_probs=205.0
Q ss_pred CCCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHH
Q 037063 108 SLNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELE 181 (588)
Q Consensus 108 ~~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~ 181 (588)
|..+..|||..+. |--.+.+++++.+.+..-. |++ +.. ...+..
T Consensus 60 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~----~~~-------------------~~~-------~~~~~~ 109 (456)
T 4atq_A 60 DVDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFT----HTC-------------------FMV-------TPYEGY 109 (456)
T ss_dssp ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCS----CCT-------------------TTT-------SCCHHH
T ss_pred eCCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhcc----Ccc-------------------cCc-------cCcHHH
Confidence 3468899998553 5567788888765553211 110 000 012334
Q ss_pred HHHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCCCCCCC-eEE-EcCCCchhHHHHHHHHHH-----h-----cCC
Q 037063 182 SKIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYPFYSNP-RLL-TVYDHENEAAALMIESSK-----K-----RGA 249 (588)
Q Consensus 182 ~~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~~~~gd-~ll-~~~e~~s~~~~~~~~~a~-----~-----~G~ 249 (588)
.++-+++.+++..+.- ..++|++++|+|+..+++.-....|. +|+ ....||......+ .... + ...
T Consensus 110 ~~lae~L~~~~p~~~~-~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~al-s~t~~~~~~~~~~~p~~~ 187 (456)
T 4atq_A 110 VAVTEQLNRLTPGDHA-KRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTM-ALTAKAMPYKTNFGPFAP 187 (456)
T ss_dssp HHHHHHHHHHSSCSSC-EEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHH-HHCCCCTTTTTTSCSCCS
T ss_pred HHHHHHHHHhCCCCCC-cEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCcccccc-ccccCccccccCCCCccc
Confidence 4667778888754322 35899999999988776543222333 455 5667776333221 1100 0 012
Q ss_pred EEEEEeccCCC-----CccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHHHcCcEEEEeC
Q 037063 250 RVSSAEFAWPN-----LRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAAEKGWHVLLDA 319 (588)
Q Consensus 250 ~v~~v~~~~~~-----~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~~~g~~vvvDa 319 (588)
.+..+|...+. ...+.+.+++.++.-......++...|++.-+....|.+.| ++.| ++|+++|+++|+|.
T Consensus 188 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DE 267 (456)
T 4atq_A 188 EVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADE 267 (456)
T ss_dssp SEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEEC
T ss_pred cceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecc
Confidence 45556553111 11123334443331001112246788888888888898887 7778 99999999999999
Q ss_pred CCcC-C-----CCCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCccccccc
Q 037063 320 TALG-S-----KDMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELET 393 (588)
Q Consensus 320 a~~~-~-----~d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~ 393 (588)
+|.. + .-...+++ .||+++++ |.+|. ..-+|++++++++++.+.+...+ ++
T Consensus 268 V~tG~GRtG~~~a~e~~gv---~PDivt~g--K~lgg-g~P~~av~~~~~i~~~~~~~~~~--~T--------------- 324 (456)
T 4atq_A 268 VQSGFCRTGEWFAVDHEGV---VPDIITMA--KGIAG-GLPLSAITGRADLLDAVHPGGLG--GT--------------- 324 (456)
T ss_dssp TTTTTTTTSSSSGGGGTTC---CCSEEEEC--GGGGT-TSSCEEEEEEHHHHTTSCTTSSC--CS---------------
T ss_pred cccccCCccccccccccCC---CCchhhhh--hcccC-cCCceeeEecHHHHhcccccCCC--CC---------------
Confidence 9765 2 11233443 49998776 74442 23479999999988777654332 11
Q ss_pred ccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHccc--CCCCCCCCCeEEEeCCCCCCC
Q 037063 394 LDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLH--HPHSETGIPLVRIYGPKVMFD 471 (588)
Q Consensus 394 ~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~--h~~~~~g~~~v~i~~p~~~~~ 471 (588)
| .| |..+ .++..+.|+.+++ +.+.++.+.+.+++.++|++|. ++.. +.+.|.=+ ..
T Consensus 325 -----f--~g--npla---~aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~--~~~~v~~V-----RG 382 (456)
T 4atq_A 325 -----Y--GG--NPVA---CAAALAAIDTMEQ---HDLNGRARHIEELALGKLRELAAELSAG--GGSVVGDI-----RG 382 (456)
T ss_dssp -----S--SS--CHHH---HHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCC-------CEEEE-----EE
T ss_pred -----C--CC--ChHH---HHhhHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhcccc--cCCceEEe-----ee
Confidence 0 11 1111 2444466676665 4466777777777777776652 1100 01222100 12
Q ss_pred cccEEEEEeecCCCCCcCH---HHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCC
Q 037063 472 RGPSLAFNVFDWNGTRIDP---ALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGC 548 (588)
Q Consensus 472 rg~iv~f~~~~~~g~~i~~---~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~ 548 (588)
+|-++.+.+.+.....-+. ..+.+.+.++|+.++... ....+||+.+.+
T Consensus 383 ~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g----------------------------~~~~~irl~PpL 434 (456)
T 4atq_A 383 RGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTCG----------------------------TYGNVIRLLPPL 434 (456)
T ss_dssp ETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEEC----------------------------TTSCEEEECCCT
T ss_pred cceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecC----------------------------CCCCEEEEECCC
Confidence 4678888775432111122 345666677899876420 001289999999
Q ss_pred CCCHHHHHHHHHHHHHhhhh
Q 037063 549 LTNFEDTYRLWAFVSRFLDA 568 (588)
Q Consensus 549 ~~t~eDv~~li~~l~~~l~~ 568 (588)
..|.|||+++++.|.+.|++
T Consensus 435 ~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 435 VISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999998875
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.29 E-value=4.5e-10 Score=121.37 Aligned_cols=354 Identities=13% Similarity=0.107 Sum_probs=205.9
Q ss_pred CCCeeeecCCCC------CCCCHHHHHHhhhhcccCcCCCCCCCCCCCCCCCCCcccccccccccccccccCCchhHHHH
Q 037063 109 LNNYVCFDYIGH------GLFSYSQMHSCSSNVHSSAASTSSSSPLPSVQLEPPFFDICYRSVNLNSWLQYGSEESELES 182 (588)
Q Consensus 109 ~~~~vyLD~a~~------gl~~~~~~~~~~~~~~~~~~~np~s~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~ 182 (588)
.++.-|||..+. |--.+.+.+++.+.+.+-...+. || + ...+...
T Consensus 64 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~-------------~~---------------~-~~~~~~~ 114 (473)
T 4e3q_A 64 VNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHA-------------FF---------------G-RMSDQTV 114 (473)
T ss_dssp TTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCCC-------------CT---------------T-EEEHHHH
T ss_pred CCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcccccc-------------cc---------------c-ccCHHHH
Confidence 368889997654 45567788887665543111000 01 0 0134445
Q ss_pred HHHHHHHHHhCCCCCCceEEEecCHHHHHHHHHHhCC------CCCCCe-EE-EcCCCchhHHHHHHHHH-----HhcC-
Q 037063 183 KIRKRIMDFMNISEDDYTLVFTANQSSAFKLLAESYP------FYSNPR-LL-TVYDHENEAAALMIESS-----KKRG- 248 (588)
Q Consensus 183 ~~r~~ia~~lga~~~e~~vvft~g~T~al~lv~~s~~------~~~gd~-ll-~~~e~~s~~~~~~~~~a-----~~~G- 248 (588)
++-++|.++...+-+ .|.|+.++|+|+..+++... -+++.. |+ ....||......+ ... +..+
T Consensus 115 ~lAe~L~~~~p~~~~--~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~-s~tg~~~~~~~~~ 191 (473)
T 4e3q_A 115 MLSEKLVEVSPFDSG--RVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSA-SMTGKPYNSVFGL 191 (473)
T ss_dssp HHHHHHHHHSSCSSC--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHH-HHSCCGGGGGGTC
T ss_pred HHHHHHHhhCCCCcc--EEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccc-cccccccccccCC
Confidence 677888888765433 49999999999887766421 124443 55 5566776333222 110 0011
Q ss_pred --CEEEEEeccC-----CCCcc-------CHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC----HHHH-HHHH
Q 037063 249 --ARVSSAEFAW-----PNLRI-------HSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS----YMWM-SVAA 309 (588)
Q Consensus 249 --~~v~~v~~~~-----~~~~i-------~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p----l~~I-~~a~ 309 (588)
..+..++... ..+.. ..+++++.|. +...++...|++.-+...-|.+.| ++.| ++|+
T Consensus 192 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~----~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~ 267 (473)
T 4e3q_A 192 PLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQ----REGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILR 267 (473)
T ss_dssp SCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHH----HHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHH
T ss_pred CCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHH----hhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhc
Confidence 1223333210 01111 1234555554 222356788999988888899887 6678 9999
Q ss_pred HcCcEEEEeCCCcC-CC-----CCCCCCCCCCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeec
Q 037063 310 EKGWHVLLDATALG-SK-----DMDTLGLSLFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEP 383 (588)
Q Consensus 310 ~~g~~vvvDaa~~~-~~-----d~~~l~l~~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~ 383 (588)
++|+++|+|.++.. +. -...++ ..||++++ -|.+|.+-.-+|++++++++.+.+....... +
T Consensus 268 ~~gilLI~DEV~tGfGRtG~~fa~e~~g---v~PDi~t~--~K~l~gG~~Pl~av~~~~~i~~~~~~~~~~~-~------ 335 (473)
T 4e3q_A 268 KYDIPVISDEVICGFGRTGNTWGCVTYD---FTPDAIIS--SKNLTAGFFPMGAVILGPELSKRLETAIEAI-E------ 335 (473)
T ss_dssp HTTCCEEEECTTTSSSTTSSSCHHHHTT---CCCSEEEE--CGGGGTTSSCCEEEEECHHHHHHHHHHHHHH-S------
T ss_pred ccceEEeccCccccCCcccchhHHHhcC---CCCChHHh--cccccCCCCCcccccccHHHHHHhccccccc-c------
Confidence 99999999999765 21 012233 34998865 4855421123799999999877653211000 0
Q ss_pred CCCcccccccccccccccCCCCCccchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCeEEE
Q 037063 384 SFSEIIELETLDESSQSKFPESSISGVSSKLVECKGLDHADALGLILISNRARYLINWLANALMNLHHPHSETGIPLVRI 463 (588)
Q Consensus 384 ~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~~al~~aL~~l~~~G~~~i~~r~~~L~~~l~~~L~~L~h~~~~~g~~~v~i 463 (588)
.|...+|.+-..+ ..++..+.|+.+++ +.+.++++.+.++|.++|++|.. .+.|.-
T Consensus 336 --------------~~~hg~T~~Gnpl-a~Aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~------~~~v~~ 391 (473)
T 4e3q_A 336 --------------EFPHGFTASGHPV-GCAIALKAIDVVMN---EGLAENVRRLAPRFEERLKHIAE------RPNIGE 391 (473)
T ss_dssp --------------CCCCCCTTTTCHH-HHHHHHHHHHHHHH---SSHHHHHHHHHHHHHHHHHHHTT------STTEEE
T ss_pred --------------ccccCCCCCCCcc-hhhhhhhhhhhhcc---ccHHHHHHHHHHHHHHHHHHHhc------CCCeeE
Confidence 0001222222222 12334456666655 55677888888899888888731 233321
Q ss_pred eCCCCCCCcccEEEEEeecCCCC--CcC-----HHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCc
Q 037063 464 YGPKVMFDRGPSLAFNVFDWNGT--RID-----PALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETR 536 (588)
Q Consensus 464 ~~p~~~~~rg~iv~f~~~~~~g~--~i~-----~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~ 536 (588)
+ ..+|-++.+.+...... ..+ ...+.+.+.++|+.+++.
T Consensus 392 v-----RG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------------------------- 437 (473)
T 4e3q_A 392 Y-----RGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPL----------------------------- 437 (473)
T ss_dssp E-----EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEE-----------------------------
T ss_pred E-----eecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEec-----------------------------
Confidence 1 12456777776432211 111 345677777889987642
Q ss_pred CCccEEEEecCCCCCHHHHHHHHHHHHHhhhhhh
Q 037063 537 SGVSVVTAALGCLTNFEDTYRLWAFVSRFLDADF 570 (588)
Q Consensus 537 ~g~~~vRvSlg~~~t~eDv~~li~~l~~~l~~~~ 570 (588)
| ..||+++.+..|.+|||++++.+.+.|++-+
T Consensus 438 -g-~~i~l~PPL~it~~eid~~~~~l~~al~~v~ 469 (473)
T 4e3q_A 438 -G-QSVVLCPPFILTEAQMDEMFDKLEKALDKVF 469 (473)
T ss_dssp -T-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred -C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 1899999999999999999999999988754
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.69 E-value=2.1e-07 Score=107.10 Aligned_cols=227 Identities=14% Similarity=0.101 Sum_probs=130.2
Q ss_pred HHHHHHHhhhccccCCCcceEEEEeCC-CCCCCccCC----HHHH-HHHHHcCcEEEEeCCCcC-CC---C--CCCCCCC
Q 037063 266 GKLMKKIVGKRKKKKKKKRGLFVFPLQ-SKVTGARYS----YMWM-SVAAEKGWHVLLDATALG-SK---D--MDTLGLS 333 (588)
Q Consensus 266 e~l~~~i~~~~~~~~~~~t~Lv~~~~~-sn~tG~~~p----l~~I-~~a~~~g~~vvvDaa~~~-~~---d--~~~l~l~ 333 (588)
+.|++.|.+.......+++.+|++.-+ ++..|.+.| +++| ++|+++|+++|+|.++.. +. . ...++
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~g-- 654 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLG-- 654 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHS--
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcC--
Confidence 456666641000012356888988886 888898886 7788 999999999999998653 21 0 11223
Q ss_pred CCCCcEEEeccCccCCCCCCceEEEEEeCcchhcccCCCCCCCceEeeecCCCcccccccccccccccCCCCCccchhhH
Q 037063 334 LFKPDFLICSFYKIFGENPSGFGCLFVKKSSASVLSGSTSSVSTIMGIEPSFSEIIELETLDESSQSKFPESSISGVSSK 413 (588)
Q Consensus 334 ~~~~D~vv~S~~K~~G~~P~G~G~L~v~~~~~~~l~~~~~g~~g~v~~~~~~~~~~~~~~~~~~~f~e~GT~~~~~~~~~ 413 (588)
..||++ ++.|.+|.+-.-+|++++++++++.+.+.... + .|...+|..-..+ ..
T Consensus 655 -v~PDii--tlsK~L~gG~~Plgav~~~~~i~~~~~~~~~~--~--------------------~~~hg~T~~g~Pl-a~ 708 (831)
T 4a0g_A 655 -CKPDIA--CFAKLLTGGMVPLAVTLATDAVFDSFSGDSKL--K--------------------ALLHGHSYSAHAM-GC 708 (831)
T ss_dssp -SCCSEE--EECGGGGTTSSCCEEEEECHHHHHTTCSSCGG--G--------------------SCCCCCTTTTCHH-HH
T ss_pred -CCCcEE--EEecccccCccCcEEEEECHHHHHHHhccccc--c--------------------cceeecCCcccHH-HH
Confidence 248976 47797652102369999999988766532100 0 0101122222222 12
Q ss_pred HHHHHHHHHHHHhCHHHHHHHH----HHH----HHHHHHHHHcccCCCCCCCCCeEEEeCCCCCCCcccEEEEEeecCCC
Q 037063 414 LVECKGLDHADALGLILISNRA----RYL----INWLANALMNLHHPHSETGIPLVRIYGPKVMFDRGPSLAFNVFDWNG 485 (588)
Q Consensus 414 ~al~~aL~~l~~~G~~~i~~r~----~~L----~~~l~~~L~~L~h~~~~~g~~~v~i~~p~~~~~rg~iv~f~~~~~~g 485 (588)
++..++|+.+++.+ +.+++ ..+ .+.+.+.+.+. +.+.-+. ..|.++.+.+.+...
T Consensus 709 Aaala~L~~i~~~~---l~~~~~~~~~~l~~~l~~~l~~~l~~~---------~~v~~vr-----g~Gl~~~iel~~~~~ 771 (831)
T 4a0g_A 709 ATAAKAIQWFKDPE---TNHNITSQGKTLRELWDEELVQQISSH---------SAVQRVV-----VIGTLFALELKADAS 771 (831)
T ss_dssp HHHHHHHHHHHCTT---TCTTBCTTSSBBCCCSCHHHHHHHHHS---------TTEEEEE-----EETTEEEEEEC----
T ss_pred HHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHHHHhhC---------CCceeEe-----ecccEEEEEEecCcc
Confidence 44456777665432 22222 222 22344455542 3332221 246777877753211
Q ss_pred -CC---cCHHHHHHHHHhCCcEeccccccCcccccchHHHHHHHHhhhcCCCCCcCCccEEEEecCCCCCHHHHHHHHHH
Q 037063 486 -TR---IDPALVQKLADRHNISLSCGFLQNIFFSGEYEQERVRVLETRSGTNETRSGVSVVTAALGCLTNFEDTYRLWAF 561 (588)
Q Consensus 486 -~~---i~~~~v~~~l~~~gI~v~~G~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~vRvSlg~~~t~eDv~~li~~ 561 (588)
.. .....+.+.+.++||.++++ . ..||+++.+..|.+||+++++.
T Consensus 772 ~~~~~~~~a~~~~~~l~e~Gv~v~p~-----------------------------g--~~lrl~pp~~~t~e~id~~~~~ 820 (831)
T 4a0g_A 772 NSGYASLYAKSLLIMLREDGIFTRPL-----------------------------G--NVIYLMCGPCTSPEICRRLLTK 820 (831)
T ss_dssp -----CHHHHHHHHHHHHTTEECCCB-----------------------------T--TEEEEECCTTCCHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHCCcEEEec-----------------------------C--CEEEEECCCCCCHHHHHHHHHH
Confidence 00 11334667777899998753 1 1899999999999999999999
Q ss_pred HHHhhhh
Q 037063 562 VSRFLDA 568 (588)
Q Consensus 562 l~~~l~~ 568 (588)
|.+.+++
T Consensus 821 l~~~l~~ 827 (831)
T 4a0g_A 821 LYKRLGE 827 (831)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 9998764
No 237
>1h9i_I EETI-II, trypsin inhibitor II; hydrolase/inhibitor, complex (serine protease/inhibitor), squash inhibitor, cystine knot; 1.9A {Ecballium elaterium} SCOP: g.3.2.1
Probab=51.66 E-value=2.9 Score=26.51 Aligned_cols=21 Identities=43% Similarity=0.928 Sum_probs=11.8
Q ss_pred ccccCCCcCC--CCCCCCCCCCC
Q 037063 12 EACCRGCCPN--PFHGLPLDHHH 32 (588)
Q Consensus 12 ~~~~~~~~~~--~~~~~~~~~~~ 32 (588)
.-|+.||.-. -+-|+|+.||+
T Consensus 13 sDCL~~CvCl~~~~~~~~~~~~~ 35 (36)
T 1h9i_I 13 SDCLAGCVCTNNKFCGSPHHHHH 35 (36)
T ss_dssp GGSCTTCEECTTSBEECC-----
T ss_pred cccccCCEEecCCccCCCccccc
Confidence 4699999766 55667775554
No 238
>2hm3_A Nematocyst outer WALL antigen; disulfide, evolution, cysteine rich, structural protein; NMR {Hydra vulgaris} PDB: 2hm4_A 2hm5_A 2hm6_A
Probab=48.76 E-value=2.6 Score=25.21 Aligned_cols=18 Identities=39% Similarity=1.008 Sum_probs=10.5
Q ss_pred CCCCccccccccccCCCcC
Q 037063 2 LSPCTGEALSEACCRGCCP 20 (588)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~ 20 (588)
|+-|++.+ -..|-+|||-
T Consensus 9 psgcsgdc-ypeckpgccg 26 (31)
T 2hm3_A 9 PSGCSGDC-YPECKPGCCG 26 (31)
T ss_dssp CTTCCGGG-TTTTCHHHHH
T ss_pred CCCcCccc-cCccCCCccc
Confidence 34455555 4556777774
No 239
>2pq4_B Periplasmic nitrate reductase precursor; NAPD/NAPA1-35, mixed beta-alpha sandwich structure, protein- peptide complex, alpha-helix; NMR {Escherichia coli}
Probab=44.44 E-value=5.4 Score=25.94 Aligned_cols=12 Identities=17% Similarity=0.279 Sum_probs=9.2
Q ss_pred HHhhhhHhhhcc
Q 037063 48 AARHEFKVTTTS 59 (588)
Q Consensus 48 ~~~~~~~~~~~~ 59 (588)
.+||+|||+++.
T Consensus 3 lsRR~FLK~~aa 14 (35)
T 2pq4_B 3 LSRRSFMKANAV 14 (35)
T ss_dssp CCSHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 379999997653
No 240
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=35.38 E-value=1e+02 Score=26.99 Aligned_cols=70 Identities=10% Similarity=0.077 Sum_probs=44.9
Q ss_pred cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HH
Q 037063 229 VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SV 307 (588)
Q Consensus 229 ~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~ 307 (588)
..|.|.--...+..+.+..|.+|.....+ +.++++.+.+.+ .+..+|.++... +.....+.++ +.
T Consensus 27 ~gd~HdiG~~~va~~l~~~G~eVi~lG~~-----~p~e~lv~aa~~-------~~~diV~lS~~~--~~~~~~~~~~i~~ 92 (161)
T 2yxb_A 27 GLDGHDRGAKVVARALRDAGFEVVYTGLR-----QTPEQVAMAAVQ-------EDVDVIGVSILN--GAHLHLMKRLMAK 92 (161)
T ss_dssp SSSSCCHHHHHHHHHHHHTTCEEECCCSB-----CCHHHHHHHHHH-------TTCSEEEEEESS--SCHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHh-------cCCCEEEEEeec--hhhHHHHHHHHHH
Confidence 44555423334456678899999987654 678888888763 577888887653 3334445555 66
Q ss_pred HHHcC
Q 037063 308 AAEKG 312 (588)
Q Consensus 308 a~~~g 312 (588)
+++.|
T Consensus 93 L~~~g 97 (161)
T 2yxb_A 93 LRELG 97 (161)
T ss_dssp HHHTT
T ss_pred HHhcC
Confidence 66643
No 241
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=29.21 E-value=1.9e+02 Score=26.33 Aligned_cols=80 Identities=13% Similarity=0.105 Sum_probs=51.9
Q ss_pred cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HH
Q 037063 229 VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SV 307 (588)
Q Consensus 229 ~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~ 307 (588)
..|.|.--...+..+.+..|.+|+.+..+ +..+++.+.+.+ .++.+|.++.... .....+.++ +.
T Consensus 97 ~gd~H~iG~~~va~~l~~~G~~v~~LG~~-----vp~~~l~~~~~~-------~~~d~v~lS~~~~--~~~~~~~~~i~~ 162 (210)
T 1y80_A 97 KGDLHDIGKNLVAMMLESGGFTVYNLGVD-----IEPGKFVEAVKK-------YQPDIVGMSALLT--TTMMNMKSTIDA 162 (210)
T ss_dssp TTCCCCHHHHHHHHHHHHTTCEEEECCSS-----BCHHHHHHHHHH-------HCCSEEEEECCSG--GGTHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHH-------cCCCEEEEecccc--ccHHHHHHHHHH
Confidence 34555422233345667889999987654 678888888863 4678888887533 233445555 67
Q ss_pred HHHcC----cEEEEeCCCc
Q 037063 308 AAEKG----WHVLLDATAL 322 (588)
Q Consensus 308 a~~~g----~~vvvDaa~~ 322 (588)
+++.| +.|++=++..
T Consensus 163 l~~~~~~~~~~v~vGG~~~ 181 (210)
T 1y80_A 163 LIAAGLRDRVKVIVGGAPL 181 (210)
T ss_dssp HHHTTCGGGCEEEEESTTC
T ss_pred HHhcCCCCCCeEEEECCCC
Confidence 77754 7888876644
No 242
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=29.04 E-value=1.8e+02 Score=28.07 Aligned_cols=78 Identities=12% Similarity=-0.061 Sum_probs=47.0
Q ss_pred CCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC
Q 037063 222 SNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS 301 (588)
Q Consensus 222 ~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p 301 (588)
++..+++..+-+ .-++++.|.++..+.--.++...++.+|.++++ ..+..+.+.|++..+.+.
T Consensus 178 ~~~~~v~~H~af-------~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~----~ik~~~v~~if~e~~~~~------ 240 (286)
T 3gi1_A 178 RSKTFVTQHTAF-------SYLAKRFGLKQLGISGISPEQEPSPRQLKEIQD----FVKEYNVKTIFAEDNVNP------ 240 (286)
T ss_dssp SCCEEEEEESCC-------HHHHHHTTCEEEEEECSCC---CCHHHHHHHHH----HHHHTTCCEEEECTTSCT------
T ss_pred CCCEEEEECCch-------HHHHHHCCCeEeeccccCCCCCCCHHHHHHHHH----HHHHcCCCEEEEeCCCCh------
Confidence 355577655433 235678899988764322445577777777776 222356777777655432
Q ss_pred HHHH-HHHHHcCcEEEE
Q 037063 302 YMWM-SVAAEKGWHVLL 317 (588)
Q Consensus 302 l~~I-~~a~~~g~~vvv 317 (588)
+-+ .+|++.|+.+++
T Consensus 241 -~~~~~la~~~g~~v~~ 256 (286)
T 3gi1_A 241 -KIAHAIAKSTGAKVKT 256 (286)
T ss_dssp -HHHHHHHHTTTCEEEE
T ss_pred -HHHHHHHHHhCCeEEE
Confidence 344 678889988763
No 243
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=28.16 E-value=1.7e+02 Score=28.83 Aligned_cols=114 Identities=14% Similarity=0.092 Sum_probs=54.9
Q ss_pred HHHHHHHHHhC--CCCCCceEEEecCHH-HHHHHHHHhCCCCCCCe--EEEcCCCchhHHHHHHHHHHhcCCEEEEEecc
Q 037063 183 KIRKRIMDFMN--ISEDDYTLVFTANQS-SAFKLLAESYPFYSNPR--LLTVYDHENEAAALMIESSKKRGARVSSAEFA 257 (588)
Q Consensus 183 ~~r~~ia~~lg--a~~~e~~vvft~g~T-~al~lv~~s~~~~~gd~--ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~ 257 (588)
.+++.|+++-- +.. ..+|+|-+.+ .++..+..+ .+.|.+ |+....-|..--..+.......|+.+..++-.
T Consensus 106 ~a~~~I~~~~~~~I~~--g~~ILTh~~S~tv~~~l~~A--~~~gk~~~V~v~EsrP~~qG~~la~~L~~~gI~vtli~Ds 181 (315)
T 3ecs_A 106 LSRNKIADLCHTFIKD--GATILTHAYSRVVLRVLEAA--VAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVVLDA 181 (315)
T ss_dssp THHHHHHHHHGGGCCT--TEEEEECSCCHHHHHHHHHH--HTTTCCEEEEEECCTTTTHHHHHHHHHHTTTCCEEEECGG
T ss_pred HHHHHHHHHHHHHcCC--CCEEEEcCCcHHHHHHHHHH--HHcCCeEEEEEecCCCcchHHHHHHHHHHcCCCEEEEehh
Confidence 34555655432 222 2477775544 444444444 344554 54433333211122334445679988887532
Q ss_pred CCCCccCHHHHHHHHhhhccccCCCcceEEEEe-CCCCCCCccCC-H--HHH-HHHHHcCcEEEEe
Q 037063 258 WPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFP-LQSKVTGARYS-Y--MWM-SVAAEKGWHVLLD 318 (588)
Q Consensus 258 ~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~-~~sn~tG~~~p-l--~~I-~~a~~~g~~vvvD 318 (588)
.+-..+. +...|++- ..-...|.+.. + -.+ -+|+.+|++|+|=
T Consensus 182 ---------a~~~~m~---------~vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~ 229 (315)
T 3ecs_A 182 ---------AVGYIME---------KADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVV 229 (315)
T ss_dssp ---------GHHHHGG---------GCSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEE
T ss_pred ---------HHHHHHH---------hCCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEE
Confidence 2333333 22233332 22233444332 2 235 6788899999883
No 244
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=26.96 E-value=2.1e+02 Score=28.00 Aligned_cols=77 Identities=14% Similarity=0.032 Sum_probs=48.6
Q ss_pred CCCeEEEcCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCC
Q 037063 222 SNPRLLTVYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYS 301 (588)
Q Consensus 222 ~gd~ll~~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~p 301 (588)
++..+++..+-+ ..++++.|.++..+.-..++...++.+|.++++ ..+..+.+.|++..+.+
T Consensus 189 ~~~~~v~~H~af-------~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~----~ik~~~v~~If~e~~~~------- 250 (312)
T 2o1e_A 189 EKKEFITQHTAF-------GYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKT----YAKEHNVKVIYFEEIAS------- 250 (312)
T ss_dssp SCCEEEESSCTT-------HHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHH----HTTSSCCCEEECSSCCC-------
T ss_pred CCCEEEEECCch-------HHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHH----HHHHcCCCEEEEeCCCC-------
Confidence 355577764433 345678899987653222455678888888887 33345667776654433
Q ss_pred HHHH-HHHHHcCcEEE
Q 037063 302 YMWM-SVAAEKGWHVL 316 (588)
Q Consensus 302 l~~I-~~a~~~g~~vv 316 (588)
-+.+ .++++.|+.++
T Consensus 251 ~~~~~~ia~e~g~~v~ 266 (312)
T 2o1e_A 251 SKVADTLASEIGAKTE 266 (312)
T ss_dssp HHHHHHHHHHTCCEEE
T ss_pred hHHHHHHHHHhCCcEE
Confidence 3445 77888998864
No 245
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=26.10 E-value=1.6e+02 Score=27.97 Aligned_cols=81 Identities=10% Similarity=0.085 Sum_probs=51.4
Q ss_pred cCCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HH
Q 037063 229 VYDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SV 307 (588)
Q Consensus 229 ~~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~ 307 (588)
..|.|.--...+..+.+..|.+|+.+..+ +.++++.+.+.+ .+..+|.++.... .....+..+ +.
T Consensus 132 ~gd~HdiG~~iva~~L~~~G~~Vi~LG~~-----vp~e~l~~~~~~-------~~~d~V~lS~l~~--~~~~~~~~~i~~ 197 (258)
T 2i2x_B 132 EGDVHDIGKNIVTALLRANGYNVVDLGRD-----VPAEEVLAAVQK-------EKPIMLTGTALMT--TTMYAFKEVNDM 197 (258)
T ss_dssp TTCCCCHHHHHHHHHHHHTTCEEEEEEEE-----CCSHHHHHHHHH-------HCCSEEEEECCCT--TTTTHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHH-------cCCCEEEEEeecc--CCHHHHHHHHHH
Confidence 34555422223345567899999998765 566888777763 4678888887643 334456665 77
Q ss_pred HHHcC--cEEEEeCCCcC
Q 037063 308 AAEKG--WHVLLDATALG 323 (588)
Q Consensus 308 a~~~g--~~vvvDaa~~~ 323 (588)
.++.| +.|++=++...
T Consensus 198 l~~~~~~~~v~vGG~~~~ 215 (258)
T 2i2x_B 198 LLENGIKIPFACGGGAVN 215 (258)
T ss_dssp HHTTTCCCCEEEESTTCC
T ss_pred HHhcCCCCcEEEECccCC
Confidence 77654 77777665443
No 246
>1h9h_I EETI-II, trypsin inhibitor II; hydrolase inhibitor, complex (serine protease/inhibitor), squash inhibitor, cystine knot, hydrolase; 1.5A {Ecballium elaterium} SCOP: g.3.2.1 PDB: 1mcv_I
Probab=24.73 E-value=14 Score=23.49 Aligned_cols=21 Identities=43% Similarity=0.910 Sum_probs=11.0
Q ss_pred ccccCCCcCC--CCCCCCCCCCC
Q 037063 12 EACCRGCCPN--PFHGLPLDHHH 32 (588)
Q Consensus 12 ~~~~~~~~~~--~~~~~~~~~~~ 32 (588)
.-|+.+|.-. .+-|+|+.||+
T Consensus 13 sDCl~~CvC~~~G~~~~~~~~~~ 35 (36)
T 1h9h_I 13 SDCLAGCVCGPNGFCGSPHHHHH 35 (36)
T ss_dssp GGSCTTCEECTTSBEECC-----
T ss_pred cCccccCeEccCCCcCCCccccc
Confidence 4688888654 56677876654
No 247
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=23.82 E-value=2.2e+02 Score=25.33 Aligned_cols=32 Identities=13% Similarity=0.135 Sum_probs=21.4
Q ss_pred CcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEE
Q 037063 282 KKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLL 317 (588)
Q Consensus 282 ~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvv 317 (588)
++.-+|+++. +|....+-++ +.||++|+.++.
T Consensus 113 ~~DvvI~iS~----SG~t~~~i~~~~~ak~~g~~vI~ 145 (199)
T 1x92_A 113 PGDVLLAIST----SGNSANVIQAIQAAHDREMLVVA 145 (199)
T ss_dssp TTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEE
Confidence 4555666654 5666555555 999999987653
No 248
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=23.36 E-value=3e+02 Score=25.69 Aligned_cols=67 Identities=7% Similarity=0.007 Sum_probs=47.6
Q ss_pred HHHHHHhcCCEEEEEeccC-------CCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHHc
Q 037063 240 MIESSKKRGARVSSAEFAW-------PNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAEK 311 (588)
Q Consensus 240 ~~~~a~~~G~~v~~v~~~~-------~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~ 311 (588)
+.++.+..+..+..++... ..+.++.++..+++.. -+.+.++..|-+...-...+.+++ +.+++.
T Consensus 175 ~~~~~~~~~~Dv~il~~g~~~~~~~~~~~hm~~~ea~~~~~~-------l~~~~vi~~H~~~~~~~~~~~~~l~~~~~~~ 247 (264)
T 3rpc_A 175 VEKALLRFDPNVIIMNTGYAQILGFEDSIIMGTKDIGRMVVR-------KPEAKIIAVHMDTVNHTATSRKDVRKFIKGN 247 (264)
T ss_dssp HHHHHHHHCCSEEEEECSCBCBTTCSSCSSCCHHHHHHHHHH-------CTTSEEEEESCSSSTTBCSCHHHHHHHHHHT
T ss_pred HHHHHHHhCCCEEEEecCccccccccCCcccCHHHHHHHHHh-------CCcCeEEEEccccccccccCHHHHHHHHHHc
Confidence 4556666788888888752 2346788887777752 346778888988665566788898 778877
Q ss_pred Cc
Q 037063 312 GW 313 (588)
Q Consensus 312 g~ 313 (588)
|+
T Consensus 248 g~ 249 (264)
T 3rpc_A 248 NI 249 (264)
T ss_dssp TC
T ss_pred CC
Confidence 64
No 249
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=22.51 E-value=2.2e+02 Score=26.97 Aligned_cols=75 Identities=13% Similarity=0.126 Sum_probs=43.5
Q ss_pred CCCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHH
Q 037063 230 YDHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAA 309 (588)
Q Consensus 230 ~e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~ 309 (588)
.++.......+.+.+++.|.++.....+ .+..-..+.++.++. .+...+++..... . .-.+.++.++
T Consensus 14 ~~~~~~~~~gi~~~a~~~g~~~~~~~~~-~~~~~~~~~i~~l~~--------~~vdgiIi~~~~~-~---~~~~~~~~~~ 80 (313)
T 3m9w_A 14 LERWQKDRDIFVKKAESLGAKVFVQSAN-GNEETQMSQIENMIN--------RGVDVLVIIPYNG-Q---VLSNVVKEAK 80 (313)
T ss_dssp SSTTHHHHHHHHHHHHHTSCEEEEEECT-TCHHHHHHHHHHHHH--------TTCSEEEEECSST-T---SCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHH--------cCCCEEEEeCCCh-h---hhHHHHHHHH
Confidence 4566677888888899999999887654 211111233444444 3444444433221 1 1123457788
Q ss_pred HcCcEEEE
Q 037063 310 EKGWHVLL 317 (588)
Q Consensus 310 ~~g~~vvv 317 (588)
+.|++||+
T Consensus 81 ~~~iPvV~ 88 (313)
T 3m9w_A 81 QEGIKVLA 88 (313)
T ss_dssp TTTCEEEE
T ss_pred HCCCeEEE
Confidence 88998765
No 250
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=22.15 E-value=2.5e+02 Score=24.84 Aligned_cols=32 Identities=9% Similarity=0.110 Sum_probs=21.8
Q ss_pred CcceEEEEeCCCCCCCccCCHHHH-HHHHHcCcEEEE
Q 037063 282 KKRGLFVFPLQSKVTGARYSYMWM-SVAAEKGWHVLL 317 (588)
Q Consensus 282 ~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~~g~~vvv 317 (588)
++.-+|+++. +|....+-++ +.||++|+.++.
T Consensus 109 ~~DvvI~iS~----SG~t~~~i~~~~~ak~~g~~vI~ 141 (196)
T 2yva_A 109 AGDVLLAIST----RGNSRDIVKAVEAAVTRDMTIVA 141 (196)
T ss_dssp TTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEE
Confidence 4555666654 5766666565 999999987653
No 251
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=21.91 E-value=35 Score=35.56 Aligned_cols=29 Identities=17% Similarity=0.252 Sum_probs=26.3
Q ss_pred CCCCCCccCCHHHH-HHHHHcCcEEEEeCC
Q 037063 292 QSKVTGARYSYMWM-SVAAEKGWHVLLDAT 320 (588)
Q Consensus 292 ~sn~tG~~~pl~~I-~~a~~~g~~vvvDaa 320 (588)
+.+-.|+..+++.+ +.||++|+.||+|.+
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 45668999999998 999999999999987
No 252
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=21.04 E-value=3.8e+02 Score=24.89 Aligned_cols=72 Identities=7% Similarity=-0.085 Sum_probs=40.5
Q ss_pred CCchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHHH
Q 037063 231 DHENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAAE 310 (588)
Q Consensus 231 e~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~ 310 (588)
++.......+.+.+++.|.++.....+ .+..-..+.++.++. .+...+++..... + + +.++.+++
T Consensus 21 ~~~~~~~~gi~~~a~~~g~~~~~~~~~-~~~~~~~~~~~~l~~--------~~vdgiIi~~~~~-~----~-~~~~~l~~ 85 (287)
T 3bbl_A 21 HILDQFLSSMVREAGAVNYFVLPFPFS-EDRSQIDIYRDLIRS--------GNVDGFVLSSINY-N----D-PRVQFLLK 85 (287)
T ss_dssp CTHHHHHHHHHHHHHHTTCEEEECCCC-SSTTCCHHHHHHHHT--------TCCSEEEECSCCT-T----C-HHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEeCC-CchHHHHHHHHHHHc--------CCCCEEEEeecCC-C----c-HHHHHHHh
Confidence 455667777788888999998776543 222223344555544 4454444433221 1 1 34566677
Q ss_pred cCcEEEE
Q 037063 311 KGWHVLL 317 (588)
Q Consensus 311 ~g~~vvv 317 (588)
.|+++|+
T Consensus 86 ~~iPvV~ 92 (287)
T 3bbl_A 86 QKFPFVA 92 (287)
T ss_dssp TTCCEEE
T ss_pred cCCCEEE
Confidence 7887554
No 253
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=20.80 E-value=1.8e+02 Score=27.07 Aligned_cols=70 Identities=9% Similarity=-0.099 Sum_probs=39.5
Q ss_pred CchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHHHHHHHc
Q 037063 232 HENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWMSVAAEK 311 (588)
Q Consensus 232 ~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I~~a~~~ 311 (588)
+.......+.+.+++.|.++.....+ .+..-..+.++.++. .+...|++..... -+.++.+++.
T Consensus 21 ~~~~~~~gi~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~l~~--------~~vdgiIi~~~~~-------~~~~~~l~~~ 84 (276)
T 3jy6_A 21 FSTELFKGISSILESRGYIGVLFDAN-ADIEREKTLLRAIGS--------RGFDGLILQSFSN-------PQTVQEILHQ 84 (276)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEECT-TCHHHHHHHHHHHHT--------TTCSEEEEESSCC-------HHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCC-CCHHHHHHHHHHHHh--------CCCCEEEEecCCc-------HHHHHHHHHC
Confidence 44556677778888999999887764 211111122333333 4454454443321 3344778888
Q ss_pred CcEEEE
Q 037063 312 GWHVLL 317 (588)
Q Consensus 312 g~~vvv 317 (588)
|+++|+
T Consensus 85 ~iPvV~ 90 (276)
T 3jy6_A 85 QMPVVS 90 (276)
T ss_dssp SSCEEE
T ss_pred CCCEEE
Confidence 987654
No 254
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=20.79 E-value=3.4e+02 Score=26.03 Aligned_cols=73 Identities=7% Similarity=-0.025 Sum_probs=40.2
Q ss_pred CchhHHHHHHHHHHhcCCEEEEEeccCCCCccCHHHHHHHHhhhccccCCCcceEEEEeCCCCCCCccCCHHHH-HHHHH
Q 037063 232 HENEAAALMIESSKKRGARVSSAEFAWPNLRIHSGKLMKKIVGKRKKKKKKKRGLFVFPLQSKVTGARYSYMWM-SVAAE 310 (588)
Q Consensus 232 ~~s~~~~~~~~~a~~~G~~v~~v~~~~~~~~i~~e~l~~~i~~~~~~~~~~~t~Lv~~~~~sn~tG~~~pl~~I-~~a~~ 310 (588)
++......+.+.+++.|..+...... .+..-..+.++.++. .+..-+++... ..+-+.+ +.+++
T Consensus 77 ~~~~~~~gi~~~a~~~g~~~~~~~~~-~~~~~~~~~~~~l~~--------~~vdgiIi~~~------~~~~~~~~~~~~~ 141 (338)
T 3dbi_A 77 YFSELLFHAARMAEEKGRQLLLADGK-HSAEEERQAIQYLLD--------LRCDAIMIYPR------FLSVDEIDDIIDA 141 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECT-TSHHHHHHHHHHHHH--------TTCSEEEECCS------SSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHCCCEEEEEeCC-CChHHHHHHHHHHHh--------CCCCEEEEeCC------CCChHHHHHHHHc
Confidence 44556677778888999999887654 211111223333444 34444444322 1233556 78888
Q ss_pred cCcEEE-EeC
Q 037063 311 KGWHVL-LDA 319 (588)
Q Consensus 311 ~g~~vv-vDa 319 (588)
.+++++ +|.
T Consensus 142 ~~iPvV~~~~ 151 (338)
T 3dbi_A 142 HSQPIMVLNR 151 (338)
T ss_dssp CSSCEEEESS
T ss_pred CCCCEEEEcC
Confidence 888644 453
Done!