BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>037071
MCEKRVDDVKELDKNATEATEGFLRPTDIDEVKVEQQEDGLDGAPYSIKASLCCNYKPGL
LSDLRRVLEALHLSIVKAEIATLEGSMKNIFVMASCKELNFENTEVCQSLVSSVHQAIRS
VLDKFSATEEFLLGAKLSNKRRRVSLFDSSLSSSSDYLWHPRITISRLRPSLVRTITAVA
QRRLPTMGGSSVWEKWEKERLLEEKGVF

High Scoring Gene Products

Symbol, full name Information P value
AT1G68810 protein from Arabidopsis thaliana 1.1e-13
BHLH32
AT3G25710
protein from Arabidopsis thaliana 1.7e-11
AT2G41130 protein from Arabidopsis thaliana 4.7e-11
AT3G56770 protein from Arabidopsis thaliana 5.6e-10
P0665D10.21
DNA binding protein-like
protein from Oryza sativa Japonica Group 6.7e-10
AT2G40200 protein from Arabidopsis thaliana 1.6e-09
Os01g0159800
ESTs C26093(C11622)
protein from Oryza sativa Japonica Group 1.7e-09
P0431A03.9
DNA-binding protein-like
protein from Oryza sativa Japonica Group 8.3e-09
OSJNBb0033J23.9
Helix-loop-helix DNA-binding domain containing protein, expressed
protein from Oryza sativa Japonica Group 1.2e-08
OJ1294_G06.8
DNA binding protein-like
protein from Oryza sativa Japonica Group 2.4e-07
OSJNBb0099P06.13
cDNA clone:002-168-H12, full insert sequence
protein from Oryza sativa Japonica Group 5.3e-07
OJ1666_A04.16
Os08g0477900 protein
protein from Oryza sativa Japonica Group 1.4e-05
OSJNBb0019B14.23
BHLH-like protein
protein from Oryza sativa Japonica Group 0.00036

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037071
        (208 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species...   183  1.1e-13   1
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37...   139  1.7e-11   2
TAIR|locus:2063203 - symbol:AT2G41130 "AT2G41130" species...   154  4.7e-11   1
TAIR|locus:2103560 - symbol:AT3G56770 "AT3G56770" species...   143  5.6e-10   1
UNIPROTKB|Q9FTQ1 - symbol:P0665D10.21 "DNA binding protei...   145  6.7e-10   1
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species...   141  1.6e-09   1
UNIPROTKB|Q7F7Z2 - symbol:Os01g0159800 "ESTs C26093(C1162...   141  1.7e-09   1
UNIPROTKB|Q6ZA99 - symbol:P0431A03.9 "Os08g0432800 protei...   138  8.3e-09   1
UNIPROTKB|Q7XZF8 - symbol:OSJNBb0033J23.9 "Helix-loop-hel...   134  1.2e-08   1
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote...   126  2.4e-07   2
UNIPROTKB|Q75IR0 - symbol:OSJNBb0099P06.13 "Putative unch...   128  5.3e-07   1
UNIPROTKB|Q6ZJC8 - symbol:OJ1666_A04.16 "Os08g0477900 pro...   117  1.4e-05   1
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro...   106  0.00036   1


>TAIR|locus:2012393 [details] [associations]
            symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
            GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
            SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
            IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
            HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
            EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
            TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
            InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
            ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
        Length = 368

 Score = 183 (69.5 bits), Expect = 1.1e-13, P = 1.1e-13
 Identities = 48/142 (33%), Positives = 83/142 (58%)

Query:     6 VDDVKELDKNATEATEGFLRPTDIDEVKV---EQQEDGLDGAPYSIKASLCCNYKPGLLS 62
             +  VKEL +  +  +E  L PT+ DE+ V   E++E G DG  + IKASLCC  +  LL 
Sbjct:   216 IQHVKELKRETSVISETNLVPTESDELTVAFTEEEETG-DGR-FVIKASLCCEDRSDLLP 273

Query:    63 DLRRVLEALHLSIVKAEIATLEGSMKNIFVMASCKELNFENTEVCQSLVSSVHQAIRSVL 122
             D+ + L+A+ L  +KAEI T+ G +KN+  +   +E + E  E  +  + ++ +A+++V+
Sbjct:   274 DMIKTLKAMRLKTLKAEITTVGGRVKNVLFVTG-EESSGEEVEE-EYCIGTIEEALKAVM 331

Query:   123 DKFSATEEFLLGAKLSNKRRRV 144
             +K +  E    G   + KR+R+
Sbjct:   332 EKSNVEESSSSG---NAKRQRM 350


>TAIR|locus:2085964 [details] [associations]
            symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0009718
            "anthocyanin-containing compound biosynthetic process"
            evidence=IMP] [GO:0016036 "cellular response to phosphate
            starvation" evidence=IMP] [GO:0080147 "root hair cell development"
            evidence=IMP] [GO:0048364 "root development" evidence=IEP]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
            GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
            HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
            EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
            IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
            ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
            PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
            KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
            PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
        Length = 344

 Score = 139 (54.0 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
 Identities = 29/89 (32%), Positives = 53/89 (59%)

Query:     6 VDDVKELDKNATEATEGFLRPTDIDEVKVEQQEDGLDGAPYSIKASLCCNYKPGLLSDLR 65
             +  +KEL +  ++ T+ +  PT+ D++ V+   +  +G    I+AS CC  +  L+ D+ 
Sbjct:   174 IQHMKELKRQTSQITDTYQVPTECDDLTVDSSYNDEEGN-LVIRASFCCQDRTDLMHDVI 232

Query:    66 RVLEALHLSIVKAEIATLEGSMKNIFVMA 94
               L++L L  +KAEIAT+ G +KNI  ++
Sbjct:   233 NALKSLRLRTLKAEIATVGGRVKNILFLS 261

 Score = 43 (20.2 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
 Identities = 6/25 (24%), Positives = 18/25 (72%)

Query:   100 NFENTEVCQSLVSSVHQAIRSVLDK 124
             +++   +  + VSS+ +A+++V++K
Sbjct:   284 DYDEERMMNNRVSSIEEALKAVIEK 308


>TAIR|locus:2063203 [details] [associations]
            symbol:AT2G41130 "AT2G41130" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR011598
            Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009941
            GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            EMBL:AC004261 EMBL:AK119059 EMBL:AY074639 IPI:IPI00526770
            PIR:T02106 RefSeq:NP_181646.1 UniGene:At.37024
            ProteinModelPortal:O80674 SMR:O80674 EnsemblPlants:AT2G41130.1
            GeneID:818712 KEGG:ath:AT2G41130 TAIR:At2g41130 eggNOG:NOG239121
            HOGENOM:HOG000006083 InParanoid:O80674 OMA:RERIKSH PhylomeDB:O80674
            ProtClustDB:CLSN2683662 Genevestigator:O80674 Uniprot:O80674
        Length = 253

 Score = 154 (59.3 bits), Expect = 4.7e-11, P = 4.7e-11
 Identities = 41/143 (28%), Positives = 79/143 (55%)

Query:     4 KRVDDVKELDKNATEATEG--FLRPTDIDEVKVEQQEDGLDGAPYSIKASLCCNYKPGLL 61
             K V  V+EL +   E ++    L P++ DE+ V    D  +      KASLCC  +  LL
Sbjct:   107 KVVQRVRELKQQTLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLL 166

Query:    62 SDLRRVLEALHLSIVKAEIATLEGSMKNIFVMASCKELN-FENTEVCQSLVSSV-HQAIR 119
              DL  +L++L++  ++AE+ T+ G  +++ V+A+ KE++  E+    Q+ + S+  ++ +
Sbjct:   167 PDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLLERSSK 226

Query:   120 SVLDKFSATEEFLLGAKLSNKRR 142
             S++++ S       G + S +RR
Sbjct:   227 SLMERSSGGG----GGERSKRRR 245


>TAIR|locus:2103560 [details] [associations]
            symbol:AT3G56770 "AT3G56770" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
            Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
            GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
            EMBL:AL390921 HOGENOM:HOG000006083 ProtClustDB:CLSN2683662
            IPI:IPI00540753 PIR:T51265 RefSeq:NP_191236.1 UniGene:At.53958
            ProteinModelPortal:Q9LET0 SMR:Q9LET0 EnsemblPlants:AT3G56770.1
            GeneID:824844 KEGG:ath:AT3G56770 TAIR:At3g56770 eggNOG:NOG237033
            InParanoid:Q9LET0 OMA:RRIIFKV PhylomeDB:Q9LET0
            Genevestigator:Q9LET0 Uniprot:Q9LET0
        Length = 230

 Score = 143 (55.4 bits), Expect = 5.6e-10, P = 5.6e-10
 Identities = 42/125 (33%), Positives = 68/125 (54%)

Query:     4 KRVDDVKELDKNATEATEGFLRPTDIDEVKVEQQEDGLDGAPYSI--KASLCCNYKPGLL 61
             K V  VKEL +   E T+  + P++ DE+ V   ED   G    I  K S CC  +P LL
Sbjct:    85 KVVQRVKELKQQTLEITDETI-PSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELL 143

Query:    62 SDLRRVLEALHLSIVKAEIATLEGSMKNIFVMASCKELNFENTEVCQSLVSSVHQAIRSV 121
              DL   L++L +  + A++ T+ G  +N+ V+A+ KE +       QS V+ +  A++S+
Sbjct:   144 KDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHG-----VQS-VNFLQNALKSL 197

Query:   122 LDKFS 126
             L++ S
Sbjct:   198 LERSS 202


>UNIPROTKB|Q9FTQ1 [details] [associations]
            symbol:P0665D10.21 "DNA binding protein-like" species:39947
            "Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
            EMBL:AP002861 EMBL:AP002745 RefSeq:NP_001042409.1 UniGene:Os.26488
            STRING:Q9FTQ1 GeneID:4324583 KEGG:osa:4324583 OMA:VRFTFLI
            ProtClustDB:CLSN2691217 Uniprot:Q9FTQ1
        Length = 267

 Score = 145 (56.1 bits), Expect = 6.7e-10, P = 6.7e-10
 Identities = 46/143 (32%), Positives = 74/143 (51%)

Query:     6 VDDVKELDKNATEATEGFLRPTDIDEVKVEQQE-DGLDG-APYSIKASLCCNYKPGLLSD 63
             V  VK+L   A         P+  DEV V++    G  G  P  ++A+L C+ +  L  D
Sbjct:   120 VGHVKKLKSAAARVGRRATVPSGADEVAVDEASATGGGGEGPLLLRATLSCDDRADLFVD 179

Query:    64 LRRVLEALHLSIVKAEIATLEGSMKNIFVMASCKELNFENTEVCQSLVSSVHQAIRSVLD 123
             ++R L+ L L +V +E+ TL G ++  F++ SC            + ++SV  A++SVLD
Sbjct:   180 VKRALQPLGLEVVGSEVTTLGGRVRLAFLV-SCGSRG----GAAAAAMASVRHALQSVLD 234

Query:   124 KFSATEEFLLGAK--LSNKRRRV 144
             K S+  +F   A   L +KRR+V
Sbjct:   235 KASSGFDFAPRAASLLGSKRRKV 257


>TAIR|locus:2065086 [details] [associations]
            symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
            GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
            SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
            IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
            ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
            GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
            HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
            ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
            Uniprot:Q9XEF0
        Length = 254

 Score = 141 (54.7 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 40/142 (28%), Positives = 75/142 (52%)

Query:     6 VDDVKELDKNATEATEGFLRPTDIDEVKVEQQE-DGLDGAPYSI--KASLCCNYKPGLLS 62
             ++ VKEL + A E+      PT+ DEV V+ +     +    +I  KAS CC  +P  +S
Sbjct:   105 IEQVKELKQKAAESPIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAIS 164

Query:    63 DLRRVLEALHLSIVKAEIATLEGSMKNIFVMASCKELNFENTEVCQSLVSSVHQAIRSVL 122
             ++ RVL  L L  ++AEI ++ G M+  F++   K+ N   T    +   ++ Q++ S L
Sbjct:   165 EIIRVLTKLQLETIQAEIISVGGRMRINFIL---KDSNCNETTNIAASAKALKQSLCSAL 221

Query:   123 DKFSATEEFLLGA-KLSNKRRR 143
             ++ +++        ++ +KR+R
Sbjct:   222 NRITSSSTTTSSVCRIRSKRQR 243


>UNIPROTKB|Q7F7Z2 [details] [associations]
            symbol:Os01g0159800 "ESTs C26093(C11622)" species:39947
            "Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
            EMBL:CM000138 OMA:QPETISD ProtClustDB:CLSN2691085 EMBL:AP002539
            RefSeq:NP_001042087.1 UniGene:Os.1443
            EnsemblPlants:LOC_Os01g06640.1 EnsemblPlants:LOC_Os01g06640.2
            GeneID:4324065 KEGG:osa:4324065 Uniprot:Q7F7Z2
        Length = 258

 Score = 141 (54.7 bits), Expect = 1.7e-09, P = 1.7e-09
 Identities = 43/149 (28%), Positives = 75/149 (50%)

Query:     6 VDDVKELDKNATEATEGFLRPTDIDEVKVEQ-QEDGLDGAP--------YSIKASLCCNY 56
             VD VK+L + A+E T+    P + +EV +E    D    A           IKAS+ C+ 
Sbjct:   107 VDQVKDLKRKASEITQRTPLPPETNEVSIECFTGDAATAATTVAGNHKTLYIKASISCDD 166

Query:    57 KPGLLSDLRRVLEALHLSIVKAEIATLEGSMKNIFVMASCKELNFENTEVCQSLVSSVHQ 116
             +P L++ +      L L  V+AE+ +L G ++++F++  C+E         +SL  +V Q
Sbjct:   167 RPDLIAGITHAFHGLRLRTVRAEMTSLGGRVQHVFIL--CREEGIAGGVSLKSLKEAVRQ 224

Query:   117 AIRSVLDKFSATEEFLLGAK-LSNKRRRV 144
             A+  V     A+ E + G+    +KR+R+
Sbjct:   225 ALAKV-----ASPELVYGSSHFQSKRQRI 248


>UNIPROTKB|Q6ZA99 [details] [associations]
            symbol:P0431A03.9 "Os08g0432800 protein" species:39947
            "Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
            SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
            UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
            KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
            ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
        Length = 345

 Score = 138 (53.6 bits), Expect = 8.3e-09, P = 8.3e-09
 Identities = 40/122 (32%), Positives = 70/122 (57%)

Query:    24 LRPTDIDEVKVEQQEDGLDGAPYSIKASLCCNYKPGLLSDLRRVLEALHLSIVKAEIATL 83
             L PT+ DE++V+   D  +G     +ASLCC  +  L+  + R L AL L   +AEIATL
Sbjct:   193 LLPTEDDELEVDAAAD--EGGRLVARASLCCEDRADLIPGIARALAALRLRARRAEIATL 250

Query:    84 EGSMKNIFVMASCKEL------NFENTE----VCQS-----LVSSVHQAIRSVLDKFSAT 128
              G ++++ ++A+ +E       N ++ E    V  S     LV+S+H+A+R V+++ +A+
Sbjct:   251 GGRVRSVLLIAAVEEEDPDEAGNDDDGEHGYGVAASHRRHELVASIHEALRGVMNRKAAS 310

Query:   129 EE 130
              +
Sbjct:   311 SD 312


>UNIPROTKB|Q7XZF8 [details] [associations]
            symbol:OSJNBb0033J23.9 "Helix-loop-helix DNA-binding domain
            containing protein, expressed" species:39947 "Oryza sativa Japonica
            Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
            Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
            GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459
            HOGENOM:HOG000006083 OMA:RERIKSH EMBL:AC137507 STRING:Q7XZF8
            EnsemblPlants:LOC_Os03g59670.1 Uniprot:Q7XZF8
        Length = 268

 Score = 134 (52.2 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 35/95 (36%), Positives = 52/95 (54%)

Query:     4 KRVDDVKELDKNATEATEGFLRPTDIDEVKVEQQEDG----LDGAPYSIKASLCCNYKPG 59
             +RV D+K+      EA    L PT+ DE+ V     G      GA    +AS+CC+ +  
Sbjct:   110 ERVRDLKQRMAGIGEAAPAHLFPTEHDEIVVLASGGGGVGGAGGAAAVFEASVCCDDRCD 169

Query:    60 LLSDLRRVLEALHLSIVKAEIATLEGSMKNIFVMA 94
             LL +L   L AL L  ++AE+ATL G ++N+ V+A
Sbjct:   170 LLPELIETLRALRLRTLRAEMATLGGRVRNVLVLA 204


>UNIPROTKB|Q6ESL3 [details] [associations]
            symbol:OJ1294_G06.8 "DNA binding protein-like"
            species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
            evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
            EMBL:AP005093 ProteinModelPortal:Q6ESL3
            EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
            Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
        Length = 363

 Score = 126 (49.4 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
 Identities = 30/89 (33%), Positives = 51/89 (57%)

Query:     7 DDVKELDKNATEATEGFLRPTDIDEVKVEQQEDGLDGAPYSIKASLCCNYKPGLLSDLRR 66
             DD   + + +  A +  L PT+ DE+ V+   D  +G    ++ASLCC  +P L+ D+ R
Sbjct:   177 DDDAVVGRRSAAAQQ--LLPTEADELAVDAAVDA-EGK-LVVRASLCCEDRPDLIPDIAR 232

Query:    67 VLEALHLSIVKAEIATLEGSMKNIFVMAS 95
              L AL L   +AEI TL G ++++ ++ +
Sbjct:   233 ALAALRLRARRAEITTLGGRVRSVLLITA 261

 Score = 38 (18.4 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
 Identities = 6/17 (35%), Positives = 14/17 (82%)

Query:   111 VSSVHQAIRSVLDKFSA 127
             +++V +A+R V+D+ +A
Sbjct:   310 IATVQEALRGVMDRRAA 326


>UNIPROTKB|Q75IR0 [details] [associations]
            symbol:OSJNBb0099P06.13 "Putative uncharacterized protein
            OSJNBb0099P06.13" species:39947 "Oryza sativa Japonica Group"
            [GO:0005634 "nucleus" evidence=IC] InterPro:IPR002912
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF01842 PROSITE:PS50888
            SMART:SM00353 GO:GO:0005634 GO:GO:0016597 GO:GO:0008152
            EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC124144
            EMBL:AC134341 EMBL:AK110619 RefSeq:NP_001054739.1 UniGene:Os.56950
            EnsemblPlants:LOC_Os05g07120.1 EnsemblPlants:LOC_Os05g07120.2
            GeneID:4337905 KEGG:osa:4337905 eggNOG:NOG309133
            HOGENOM:HOG000241234 OMA:VSCDDRP ProtClustDB:CLSN2691085
            Uniprot:Q75IR0
        Length = 271

 Score = 128 (50.1 bits), Expect = 5.3e-07, P = 5.3e-07
 Identities = 42/144 (29%), Positives = 71/144 (49%)

Query:     6 VDDVKELDKNATEATEGFLR---PTDIDEVKVEQQEDG--LDGAPYSIKASLCCNYKPGL 60
             V+ VK L   ATEAT        P + +EV V+    G     A   ++A++ C+ +PGL
Sbjct:   108 VNQVKHLKTRATEATTPSTAATIPPEANEVTVQCYAGGEHTAAARTYVRATVSCDDRPGL 167

Query:    61 LSDLRRVLEALHLSIVKAEIATLEGSMKNIFVMASCKELNFENTEVCQSLVSSVHQAIRS 120
             L+D+      L L  + A+++ L G  ++ FV+  C+E   E     ++    + +A+R 
Sbjct:   168 LADIAATFRRLRLRPLSADMSCLGGRTRHAFVL--CREEEEEEDAAAEA--RPLKEAVRQ 223

Query:   121 VLDKFSATEEFLLGAKLSNKRRRV 144
              L K  A  E + G    +KR+R+
Sbjct:   224 ALAKV-ALPETVYGGGGRSKRQRL 246


>UNIPROTKB|Q6ZJC8 [details] [associations]
            symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
            "Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
            EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
            EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
            OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
        Length = 223

 Score = 117 (46.2 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 40/133 (30%), Positives = 69/133 (51%)

Query:     6 VDDVKELDKNATEATEG--FLRPTDIDEVKVEQQEDG---LDGAPY-----------SIK 49
             V  V+EL   A +ATEG   + P + DEV VE ++D     D   Y            ++
Sbjct:    61 VRHVRELRCRADDATEGADVVVPGEGDEVGVEDEDDDEGERDEGCYVVGGGDRRWRRRVR 120

Query:    50 ASLCCNYKPGLLSDLRRVLEALHLSIVKAEIATLEGSMKNIFVMASCKELNFENTEVCQS 109
             A +CC  +PGL+SDL R + ++    V+AE+AT+ G  +++  +      +  + +   +
Sbjct:   121 AWVCCADRPGLMSDLGRAVRSVSARPVRAEVATVGGRTRSVLELDVVVASDAADNDRAVA 180

Query:   110 LVSSVHQAIRSVL 122
             L S++  A+R+VL
Sbjct:   181 L-SALRAALRTVL 192


>UNIPROTKB|Q69MD0 [details] [associations]
            symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
            "Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
            ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
            Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
        Length = 215

 Score = 106 (42.4 bits), Expect = 0.00036, P = 0.00036
 Identities = 41/145 (28%), Positives = 73/145 (50%)

Query:     9 VKELDKNATEAT-EGFLRPTDIDEVKVEQQEDGLDG---------APYSIKASLCCNYKP 58
             V+ + K  +EA     + P + DEV VE++E  ++G         A   +KAS+CC  +P
Sbjct:    70 VRYVRKLRSEAAGSAAVVPGEGDEVVVEEEEVEVEGCSCDAGERQAARRVKASVCCADRP 129

Query:    59 GLLSDLRRVLEALHLSIVKAEIATLEGSMKNIFVMASCKELNFENTEVCQSLVSSVHQAI 118
             GL+S+L     ++    V+AEIAT+ G  ++   +   +           S + ++  A+
Sbjct:   130 GLMSELGDAERSVSARAVRAEIATVGGRTRSDLELDVARTAAAGGGSNGASQLPALQAAL 189

Query:   119 RSVLDKFSATEEFLLGAKLSNKRRR 143
             R+V+     ++E LL  + S K+RR
Sbjct:   190 RAVI----MSQEELLAVE-SYKQRR 209


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.377    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      208       183   0.00076  110 3  11 22  0.42    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  13
  No. of states in DFA:  577 (61 KB)
  Total size of DFA:  139 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.83u 0.13s 16.96t   Elapsed:  00:00:01
  Total cpu time:  16.83u 0.13s 16.96t   Elapsed:  00:00:01
  Start:  Mon May 20 21:18:58 2013   End:  Mon May 20 21:18:59 2013

Back to top