Your job contains 1 sequence.
>037075
DKSTPSHDGEYLQHRDEQRTGLRGSPFSQRDSRLRHFSPDSEKSKMTDKNAEPSEVLWIG
FPALLKVDEVILRKAFSPFGEIEKITVFPGRSYAFVQFRSIISACRAKETLQGKLFGNPR
VHICFAKSEAGANSGRGSLNAPSSPHFKLNGRSGSSENFRPARNFGSFAGDPSVRSPQLI
SNLDSGDADVYNFNRKGTLWSSGNNAYEPMRLGEVRNEPGLSQDMYEHRMSPPIERTPHF
HEVPHKRPVYEESWDSPEDSYYQPGAKKLKIGSFPPDKELPEYPFSDLEQEKHTFSRTYS
DFSQPEVFDKNLDAGPFGYKQIPDQQMNLALPCREKNDHWRTPHDSFQAGFGSLPPNPVD
RKKFTPELEKPSFKEWKWEGTIAKGGTPVCRARCFPVGKVMDMMLPEFLDCTARTGLDML
AKHYYQASGSWVVFFVPGSDGDIGFYNEFMHYLEEKQRAAVAKLDDKTTLFLVPPSEFSE
KVLKVPGKLSISGVVLRLEPPGYNQGPIHHPNELKDANYLSFNADASYLNQSMRSEPFPS
RVSFPDMTMSAQSASYPGSVHSMGNISDSYGENRHEYPPHQMNTSLRPNHSPHYMQNPVS
GNRNIPSQASNSFVDSSIDGHPSVVPKVVQETSSAYTDGISGIPLSENRQLSHQETKPSG
SLPTPIASLQPEQLAQLASTLLGQQGQAGFTPNVSTAENQRQTATGHQSDSPLRSSQVYA
LQNNPVMPETSQFGQVQQLQRQQQTSSVIAAVNPATQREVQSGQAESQQLQTTGNQDADA
DPQKRLQATLQLAAALLQQIQRGKGT
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037075
(806 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2135605 - symbol:AT4G12640 species:3702 "Arabi... 1560 3.6e-160 1
TAIR|locus:2058203 - symbol:FPA species:3702 "Arabidopsis... 390 4.2e-49 2
TAIR|locus:2077427 - symbol:AT3G08000 species:3702 "Arabi... 109 3.9e-05 1
UNIPROTKB|D4ADG1 - symbol:D4ADG1 "Uncharacterized protein... 118 0.00022 2
UNIPROTKB|G4NFS0 - symbol:MGG_08741 "tRNA selenocysteine-... 124 0.00024 1
DICTYBASE|DDB_G0293252 - symbol:DDB_G0293252 "putative RN... 127 0.00024 1
WB|WBGene00012904 - symbol:tiar-2 species:6239 "Caenorhab... 124 0.00026 1
UNIPROTKB|F8WE16 - symbol:TIA1 "Nucleolysin TIA-1 isoform... 101 0.00028 1
ASPGD|ASPL0000066087 - symbol:AN7474 species:162425 "Emer... 129 0.00028 1
DICTYBASE|DDB_G0279639 - symbol:DDB_G0279639 "RNA-binding... 126 0.00094 2
>TAIR|locus:2135605 [details] [associations]
symbol:AT4G12640 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002687 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR012921 Pfam:PF07744 IPI:IPI00546459 RefSeq:NP_193001.2
UniGene:At.46444 ProteinModelPortal:F4JRD9 SMR:F4JRD9 PRIDE:F4JRD9
EnsemblPlants:AT4G12640.1 GeneID:826877 KEGG:ath:AT4G12640
OMA:ERNYEAG Uniprot:F4JRD9
Length = 823
Score = 1560 (554.2 bits), Expect = 3.6e-160, P = 3.6e-160
Identities = 346/719 (48%), Positives = 445/719 (61%)
Query: 3 STPSHDGEYLQHRDEQRTGLRGSPFSQRDSRLRHFSPDS-EKSKMTDKNAEPSEVLWIGF 61
ST S + +H DEQR+ RGS F QRDSR+R+ SPD+ KSKM D+NAEPSEVL+IGF
Sbjct: 99 STGSRTDDIYRH-DEQRSAARGSSFVQRDSRMRYESPDTYSKSKMNDRNAEPSEVLYIGF 157
Query: 62 PALLKVDEVILRKAFSPFGEIEKITVFPGRSYAFVQFRSIISACRAKETLQGKLFGNPRV 121
PA LKVD+ +LR FS FGEI K+TVFPGRSYAFVQFR++++AC+AKE+LQGKLFGNPRV
Sbjct: 158 PASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMAACKAKESLQGKLFGNPRV 217
Query: 122 HICFAKSE-AGANSGRGSLNAPSSPHFKLNGRSGSSENFRPARNFGSFAGDPSVRSPQLI 180
HICFAKSE + + SGRG SP ++ R GSSE + RN+GS + PSVR P I
Sbjct: 218 HICFAKSEPSSSGSGRGPSGRSLSPPYRSVDRLGSSEGYLQDRNYGSISRIPSVREPHYI 277
Query: 181 SNLDSGDADVYNFNRKGTLWSSGNNAYEPMRLGEVRNEPGLSQDMYEHRMSPPIERTPHF 240
+ D D++ Y FNRK S G AY G R+ QDM+E+ SP E F
Sbjct: 278 EDRDLEDSEGYIFNRKRDSSSDGGPAY-----GRSRSTHRFPQDMHEYHGSPG-EMGTSF 331
Query: 241 HEVPHKRPV----YEESWDSPEDSYYQPGAKKLKIGSFPPDKELPEYPFSDLEQEKHTFS 296
+ PH+ YEE WD PED YY K+LK S P+++LP + S +EQE+ FS
Sbjct: 332 RDNPHRFQTRSSEYEEPWDLPEDDYYYQEIKRLKTRSSQPERQLPGHQLSGIEQERRPFS 391
Query: 297 RTYSDFSQPEVFDKNLDAGPFGYKQIPDQQMNLALPCREKNDHWRTPHDSFQAGFGSLPP 356
R +DFS + F++N +AG Y Q +Q +NLA+ +K+ R PH+ G+ LP
Sbjct: 392 RASADFSPKDAFERNYEAGQLRYNQTVEQPLNLAIRNGDKSS-LREPHEELMGGY-PLPS 449
Query: 357 NPVDRKKFTPELEKPSFKEWKWEGTIAKGGTPVCRARCFPVGKVMDMMLPEFLDCTARTG 416
+RK++TPEL +PS K+W WEGTIAKGG P+CRA+CFPVGKVMDMMLPEFLDCTARTG
Sbjct: 450 VVPERKRYTPELNRPSLKDWNWEGTIAKGGNPICRAKCFPVGKVMDMMLPEFLDCTARTG 509
Query: 417 LDMLAKHYYQASGSWVVFFVPGSDGDIGFYNEFMHYLEEKQRAAVAKLDDKTTLFLVPPS 476
LDMLAKHYYQ+S +WVVFFVPGSD DI FY+EFMHYLEEKQRAAV+KLDD TTLFLVPPS
Sbjct: 510 LDMLAKHYYQSSKAWVVFFVPGSDADIVFYDEFMHYLEEKQRAAVSKLDDTTTLFLVPPS 569
Query: 477 EFSEKVLKVPGKLSISGVVLRLEPPGYNQG-PIHHPNELKDANYLSFNADASYLNQSMRS 535
+FSEKVLKVPGKLSISGV+LRLE G G P+ E KD + L++ + SY +++ +
Sbjct: 570 DFSEKVLKVPGKLSISGVILRLECGGSGSGGPVQQQGERKDTDLLTYYGETSY-SEASGA 628
Query: 536 EPFPSRVSFPDMTMSAQSASYPGSVHSMGN-ISDSYGENRHEY-----PPHQMNTSLRPN 589
P P T +SA SM + D + + H Y PP N P
Sbjct: 629 FPDVGNPRIPGPTAFLRSAGRDNQSASMDPYVEDKHDQLSHRYSGSDWPPRDTN----PR 684
Query: 590 HSPHYMQNPVSGNRN-IPSQASNSFVDSSIDGHPSVVPKVVQETSSAYTDGISGIPLSEN 648
SP ++ + V + +P + N+ + D + VP Q + S +P +
Sbjct: 685 SSP-FIDHTVQKHSGFVPGKQQNADLSRYHDTE-TPVPAGFQPEQLTHL--ASSLP-RQQ 739
Query: 649 RQLSHQETKPSGSLPTPIASLQPEQLAQLAST--LLGQQGQAGFTPNVSTAENQRQTAT 705
+Q+ + +P P AS Q AQ S L+ Q Q + ++ +Q+Q T
Sbjct: 740 QQVQNTPNQPERYAPEGRASFSHLQHAQTPSIPQLVTPQNQ---NVQIQSSNSQQQEET 795
Score = 133 (51.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 38/86 (44%), Positives = 47/86 (54%)
Query: 53 PSEVLWIG-FPALLKVDEVILRKAFSPFGEIEKITVFPGRSYAFVQFRSIISACRAKETL 111
PS LW+G P + E+ R F FGE+E + PGRSYAFV F A A E+L
Sbjct: 21 PSRHLWVGNLPHGILERELADR--FLRFGELESLAFQPGRSYAFVNFNHDEDAFAAIESL 78
Query: 112 QG-KLFGNPRVHICFAKSEAGANSGR 136
QG L GNP + I FAK+E + R
Sbjct: 79 QGFPLSGNP-LRIEFAKAEKSSTGSR 103
Score = 74 (31.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 56/196 (28%), Positives = 77/196 (39%)
Query: 607 SQASNSFVDSSIDGHPSVV-PKVVQETSSAYTDGISGIPLSENR--QLSHQETKPSGSLP 663
S+AS +F D G+P + P ++ S P E++ QLSH+ SGS
Sbjct: 623 SEASGAFPDV---GNPRIPGPTAFLRSAGRDNQSASMDPYVEDKHDQLSHRY---SGS-D 675
Query: 664 TPIASLQPEQLAQLASTLLGQQGQAGFTPNVS-TAENQR--QTAT----GHQSD--SPLR 714
P P + T+ Q +GF P A+ R T T G Q + + L
Sbjct: 676 WPPRDTNPRSSPFIDHTV---QKHSGFVPGKQQNADLSRYHDTETPVPAGFQPEQLTHLA 732
Query: 715 SS---QVYALQNNPVMPE--TSXXXXXXXXXXXXXTSSVIAAVNPATQREVQSGQAESQQ 769
SS Q +QN P PE T S+ V P Q VQ + SQQ
Sbjct: 733 SSLPRQQQQVQNTPNQPERYAPEGRASFSHLQHAQTPSIPQLVTPQNQN-VQIQSSNSQQ 791
Query: 770 LQTTGNQDADADPQKR 785
+ T +A+PQKR
Sbjct: 792 QEET-----EANPQKR 802
Score = 43 (20.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 21/100 (21%), Positives = 39/100 (39%)
Query: 523 NADASYLNQSMRSEPFPSRVSFPDMTMSAQSASYPGSVHSMGNISDSYGENRHEYPPHQM 582
NAD S + + P P+ F ++ ++S P + N + R+
Sbjct: 706 NADLSRYHDT--ETPVPA--GFQPEQLTHLASSLPRQQQQVQNTPNQ--PERYAPEGRAS 759
Query: 583 NTSLRPNHSPHYMQNPVSGNRNIPSQASNSFVDSSIDGHP 622
+ L+ +P Q N+N+ Q+SNS + +P
Sbjct: 760 FSHLQHAQTPSIPQLVTPQNQNVQIQSSNSQQQEETEANP 799
>TAIR|locus:2058203 [details] [associations]
symbol:FPA species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=IMP] [GO:0000785 "chromatin"
evidence=IDA] [GO:0009553 "embryo sac development" evidence=IGI]
[GO:0009790 "embryo development" evidence=IGI] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0006378 "mRNA
polyadenylation" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0030154 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0000785
GO:GO:0006351 GO:GO:0003723 GO:GO:0009790 GO:GO:0009911
GO:GO:0031048 GO:GO:0010228 GO:GO:0009908 GO:GO:0009553
EMBL:AC002335 InterPro:IPR012921 Pfam:PF07744 HSSP:Q9V535
EMBL:AY849993 EMBL:AY094463 EMBL:BT003029 EMBL:AK317032
EMBL:AK318833 IPI:IPI00545884 IPI:IPI00852356 IPI:IPI00955350
RefSeq:NP_001078046.1 RefSeq:NP_001078047.1 RefSeq:NP_001078048.1
RefSeq:NP_181869.2 UniGene:At.12188 UniGene:At.36898
ProteinModelPortal:Q8LPQ9 SMR:Q8LPQ9 IntAct:Q8LPQ9 STRING:Q8LPQ9
PaxDb:Q8LPQ9 PRIDE:Q8LPQ9 EnsemblPlants:AT2G43410.2
EnsemblPlants:AT2G43410.3 EnsemblPlants:AT2G43410.4 GeneID:818942
KEGG:ath:AT2G43410 TAIR:At2g43410 eggNOG:NOG250829
HOGENOM:HOG000015139 InParanoid:A8MQX1 OMA:TSAYIDF PhylomeDB:Q8LPQ9
ProtClustDB:CLSN2697851 Genevestigator:Q8LPQ9 PROSITE:PS50917
Uniprot:Q8LPQ9
Length = 901
Score = 390 (142.3 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 137/431 (31%), Positives = 196/431 (45%)
Query: 332 PCREKNDHWRTPHDSFQAGFGSLPPNPVDRKKF------TPELEKPSFKEWKWEGTIAKG 385
P + + RT D GF P VD + F + P + W G IAKG
Sbjct: 392 PAQLVRESKRTRRDGSVDGF---TPMGVDERSFGRGSVAARPIRGPPDSDHIWRGMIAKG 448
Query: 386 GTPVCRARCFPVGKVMDMMLPEFLDCTARTGLDMLAKHYYQASGSWVVFFVPGSDGDIGF 445
GTPVC ARC P+GK ++ LPE ++C+ART L+MLAKHY A G +VFFVP + D
Sbjct: 449 GTPVCCARCVPMGKGIETKLPEVVNCSARTDLNMLAKHYAVAIGCEIVFFVPDREEDFAS 508
Query: 446 YNEFMHYLEEKQRAAVAKLDDKTTLFLVPPSEFSEKVLKVPGKLSISGVVLRLEPPG--- 502
Y EF+ YL K RA VAKLDD TTLFLVPPS+F VL+V + + GVVL+L PP
Sbjct: 509 YTEFLRYLSSKDRAGVAKLDDGTTLFLVPPSDFLTDVLQVTRQERLYGVVLKLPPPAVPV 568
Query: 503 ---YNQ----GPIHHPNELKDANYLSFNADASYLNQSMRSEPFPSRVSF----PDMTMSA 551
Y Q P+H+ ++ +D+ A+AS+ S+ +P R ++ P+ +A
Sbjct: 569 TASYRQESQSNPLHYMDQARDSP-----ANASH---SL----YPPRENYIRGAPEHLTAA 616
Query: 552 QSASYPGSVHSMGNISDSYGENRHEYPPHQMNT--SLRPNHSPHYMQNPVSGNRNIPSQA 609
S + N + G + P + T S+ P S P + + P
Sbjct: 617 SKPSVSEPLRIPNNAAPQAGVS---LTPELLATLASILPATS-----QPAAPESHQPMSG 668
Query: 610 SNSFVDSSIDGHPSVVPKVVQETSSAYTDGISGIPLSENR---QLSHQETKPSGSLPTPI 666
++ V ++ H S + S A+ G + + N+ Q +Q T P+G LP P
Sbjct: 669 PSTVVSTA---HQSNGLYNGEAPSQAWKRGPQTVHDASNQSFQQYGNQYT-PAGQLPPPP 724
Query: 667 -----ASLQPEQLAQLASTLLGQQGQAGFTPNVSTAENQRQTA----TGHQSDSPLRSSQ 717
AS P + + + Q Q+ P +S N T S+ P+
Sbjct: 725 SRYPPASNNPNYTSGMVHGNMQYQSQSVNMPQLSPLPNMPHNNYSMYTQGSSNHPVSQPM 784
Query: 718 VYALQNNPVMP 728
V Q MP
Sbjct: 785 VQQYQPEASMP 795
Score = 204 (76.9 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 48/123 (39%), Positives = 71/123 (57%)
Query: 10 EYLQHRDEQRTGLRGSPFSQRDSRLRHFSPDSEKSKMTDK-NAEPSEVLWIGFP--ALLK 66
++L+ + ++ GS + R+ + H P S K + +PS+VLWIGFP A
Sbjct: 162 DFLRSQAPKKEQWAGS-YDNRNGNMNH-KPQYPHSYEDFKGDVQPSKVLWIGFPPTATQC 219
Query: 67 VDEVILRKAFSPFGEIEKITVFPGRSYAFVQFRSIISACRAKETLQGKLFGNPRVHICFA 126
DE IL A FGEIE++ +P R++A V+FRS A + KE LQG+LF NPR+ I ++
Sbjct: 220 NDEQILHNAMILFGEIERVKSYPSRNFALVEFRSAEEARQCKEGLQGRLFNNPRIKIMYS 279
Query: 127 KSE 129
E
Sbjct: 280 NDE 282
Score = 120 (47.3 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 41 SEKSKMTDKNAEPSEVLWIGFPALLKVDEVILRKAFSPFGEIEKITVFPGRSYAFVQFRS 100
S K D + S LW+G + E L + F +G+I++ITV+ R +AF+ +R
Sbjct: 4 SMKPFRADDSGFQSNNLWVG-SLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRH 62
Query: 101 IISACRAKETLQGKLFGNPRVHICFAK 127
+ A AKE LQG ++ I +A+
Sbjct: 63 VEEAVAAKEALQGANLNGSQIKIEYAR 89
Score = 102 (41.0 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 34/107 (31%), Positives = 53/107 (49%)
Query: 51 AEPSEVLWIGF--PALLKVDEVILRKAFSPFGEIEKITVFPGRSYAFVQFRSIISACRAK 108
A+P + LW+G P + K D L + FS FG+IE R AF+ + + A +AK
Sbjct: 91 AKPCKSLWVGGIGPNVSKDD---LEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQAK 147
Query: 109 ETLQGKLFGNPRVHICFAKSEA-------GANSGR-GSLN-APSSPH 146
++ GK G + + F +S+A G+ R G++N P PH
Sbjct: 148 -SMNGKPMGGSFLRVDFLRSQAPKKEQWAGSYDNRNGNMNHKPQYPH 193
Score = 60 (26.2 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 39/195 (20%), Positives = 74/195 (37%)
Query: 511 PNELKDANYLSFNADASYLNQSMRSEPFPSRVSFPDMTMSAQSASYPGSVHSMGNISDSY 570
P + DA+ SF + + + P PSR +P + + S G VH GN+ Y
Sbjct: 696 PQTVHDASNQSFQQYGNQYTPAGQLPPPPSR--YPPASNNPNYTS--GMVH--GNMQ--Y 747
Query: 571 GENRHEYPPHQMNTSLRPNHSPHYMQNPVSGNRNIPSQASNSFVDSSIDGHPSVVPKVVQ 630
P Q++ H+ + M S N + + + + + P +
Sbjct: 748 QSQSVNMP--QLSPLPNMPHNNYSMYTQGSSNHPVSQPMVQQYQPEASMPNQNYGP--IP 803
Query: 631 ETSSAYTDGISGIPLSENRQLSHQETKPSGSLPTPIASLQPEQLAQLASTLLGQQGQAGF 690
A G+ ++ + L+ + + + P A+L+P+ A ++ GQ
Sbjct: 804 SYQQA---NFHGVTTNQAQNLNPSQFQAAMQPPADKANLEPQNQALRLQPMISGDGQG-- 858
Query: 691 TPNVSTAENQRQTAT 705
T + +NQR +T
Sbjct: 859 TTDGEVDKNQRYQST 873
>TAIR|locus:2077427 [details] [associations]
symbol:AT3G08000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC013483 eggNOG:COG0724
HOGENOM:HOG000276232 HSSP:Q14103 UniGene:At.40270 UniGene:At.28103
EMBL:BT012118 EMBL:BT012373 IPI:IPI00520412 RefSeq:NP_187457.1
ProteinModelPortal:Q9SFB4 SMR:Q9SFB4 EnsemblPlants:AT3G08000.1
GeneID:819991 KEGG:ath:AT3G08000 TAIR:At3g08000 InParanoid:Q9SFB4
OMA:FCTSSSA PhylomeDB:Q9SFB4 ProtClustDB:CLSN2915579
Genevestigator:Q9SFB4 Uniprot:Q9SFB4
Length = 143
Score = 109 (43.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 37/98 (37%), Positives = 49/98 (50%)
Query: 36 HFSPDSEKSKMTDKNAEPSEVLWIGFPALLKVDEVILRKAFSPFGEIEKITVF----PGR 91
HF P T +A PS L+IG + VDE L+ AFS FGE+ ++ + GR
Sbjct: 26 HFLPQF----CTSSSASPSSKLFIGGLSW-SVDEQSLKDAFSSFGEVAEVRIAYDKGSGR 80
Query: 92 S--YAFVQFRSIISACRAKETLQGK-LFGNPRVHICFA 126
S + FV F A AK+ + GK L G P + I FA
Sbjct: 81 SRGFGFVDFAEEGDALSAKDAMDGKGLLGRP-LRISFA 117
>UNIPROTKB|D4ADG1 [details] [associations]
symbol:D4ADG1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001751 InterPro:IPR002048 InterPro:IPR011992
PROSITE:PS00303 PROSITE:PS50222 Prosite:PS00018 GO:GO:0005509
Gene3D:1.10.238.10 InterPro:IPR018247 InterPro:IPR013787
Pfam:PF01023 OrthoDB:EOG4RJG10 IPI:IPI00779912
Ensembl:ENSRNOT00000035763 Uniprot:D4ADG1
Length = 2862
Score = 118 (46.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 79/306 (25%), Positives = 117/306 (38%)
Query: 499 EPPGYNQGPIH-HPNELKDANYLSFNADASYLNQS--MRSEPFPSRVSFPDMTMSAQSAS 555
E PG + P+H +E ++ S S QS E + P S
Sbjct: 927 ETPG--RSPVHPESSEGEEHTEASQRHSRSTQRQSRLQHGESIHGQHGSPQRQGQGHSRP 984
Query: 556 YPG-SVHSMGNISDS--YGENRHEYPPHQMNTSLRPNHSPHYMQNPV----SG--NRNIP 606
+ G +VH DS ++RH+ P H T P SP + ++ SG R+
Sbjct: 985 HHGETVHGQRQFPDSSRQPQSRHDEPSHS-GTGRTPRRSPIHPESSDGEEHSGFSQRHSE 1043
Query: 607 S---QASNSFVDSSIDGHPSVVPKVVQETSSAYT-DGISGIPL-SENRQLSHQ--ETKPS 659
S QA + +S H P++ E+S G S S +R HQ E+ P
Sbjct: 1044 STHRQAGHQHRESGYGQHGK--PQIHSESSEGEEHSGFSQRHSESAHRHAGHQHRESVP- 1100
Query: 660 GSLPTPIASLQPEQLAQLASTLLGQQGQAGFTPNVSTAENQRQTATGHQSDSPLRSSQVY 719
G +P + Q Q ++ Q G +P ++ RQ GH+ S RSS+
Sbjct: 1101 GQHGSPQSQFQGHSRLQHGESVPAQHG----SPQRQGQDSSRQPQYGHEGPSHSRSSR-- 1154
Query: 720 ALQNNPVMPETSXXXXXXXXXXXXXTSSVIAAVNPATQREVQSGQAESQQLQTTGNQDAD 779
+ + +PV PE+S S+ A + RE GQ S Q Q QD+
Sbjct: 1155 SPRRSPVHPESSEGEEHSEASQRHSGSTHSHAAHQ--HRESVCGQHGSPQSQF---QDST 1209
Query: 780 ADPQKR 785
PQ R
Sbjct: 1210 GHPQSR 1215
Score = 71 (30.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 33/135 (24%), Positives = 56/135 (41%)
Query: 127 KSEAGANSGRGSLNAPSSPHFKLNGRSGSSENFRPARNFGSFAGDPSVRSPQLISNLDSG 186
+S + + G GS + PS F +G SGS ++ + ++GS +G PS S
Sbjct: 815 QSSSSEHHGSGS-SQPSG--FGEHG-SGS-HHWSSSGHYGSGSGQPSGFGKHEYSTHQPT 869
Query: 187 DADVYNFNRKGTL---WSSGNNAYEPMRLGEVRNEPGLSQDMYEHRMSPPIERTPHFHEV 243
+ Y+ + G W + + GE + P S + H S + + E
Sbjct: 870 SSG-YHESGSGPSSRSWQHRTGSGQSFGFGEHESGPDQSSSSWRHWTSSGQSQYDNHRET 928
Query: 244 PHKRPVYEESWDSPE 258
P + PV+ ES + E
Sbjct: 929 PGRSPVHPESSEGEE 943
>UNIPROTKB|G4NFS0 [details] [associations]
symbol:MGG_08741 "tRNA selenocysteine-associated protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:CM001236 RefSeq:XP_003719244.1
EnsemblFungi:MGG_08741T0 GeneID:2679034 KEGG:mgr:MGG_08741
Uniprot:G4NFS0
Length = 415
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 41/136 (30%), Positives = 59/136 (43%)
Query: 38 SPDSEKSKMTDKNAEPSEVLWIGFPALLKVDEVILRKAFSPFGEIEKITVFPGRSYAFVQ 97
+P ++ TD N + V G + DE LR F FG+I + + PG+ FVQ
Sbjct: 270 NPMQPMNQFTDPNN--TTVFVGGLSGYVTEDE--LRSFFQGFGDITYVKIPPGKGCGFVQ 325
Query: 98 FRSIISACRAKETLQGKLFGNPRVHICFAKSEAGANSGRGSLNAPSSPHFKLNGRSGSSE 157
F +A A +QG GN RV + + +S+ + G AP PH+ G
Sbjct: 326 FVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNSGVGTPYRPAPPPPHWG-GGMPPHGG 384
Query: 158 NFRPARNFGS-FAGDP 172
P FG F G+P
Sbjct: 385 PAGPGAPFGGPFGGNP 400
>DICTYBASE|DDB_G0293252 [details] [associations]
symbol:DDB_G0293252 "putative RNA binding protein"
species:44689 "Dictyostelium discoideum" [GO:0006396 "RNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000061
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 Pfam:PF01805
PROSITE:PS50102 PROSITE:PS50128 SMART:SM00360 SMART:SM00648
dictyBase:DDB_G0293252 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:AAFI02000200 GO:GO:0006396 Gene3D:1.25.40.90
InterPro:IPR008942 SUPFAM:SSF48464 InterPro:IPR006903
InterPro:IPR006569 Pfam:PF04818 SMART:SM00582 SUPFAM:SSF109905
PROSITE:PS51391 eggNOG:NOG314315 RefSeq:XP_629218.1
ProteinModelPortal:Q54C48 GeneID:8629100 KEGG:ddi:DDB_G0293252
InParanoid:Q54C48 OMA:FGKVENA Uniprot:Q54C48
Length = 691
Score = 127 (49.8 bits), Expect = 0.00024, P = 0.00024
Identities = 37/143 (25%), Positives = 67/143 (46%)
Query: 7 HDGEYLQHRDEQRTGLRGSPFSQRDSRLR-HFSPDSEKSKMTDKNAEPSEVLWIGFPALL 65
H ++ QH+ +Q+ G G +++ H+ ++K EP++++W G
Sbjct: 135 HQQQHQQHQQQQQQG--GYMGGNGPNQMAPHY-----QNKGAGGQLEPTKIVWAGNINPE 187
Query: 66 KVDEVILRKAFSPFGEIEKITVFPGRSYAFVQFRSIISACRAKETLQGKLFGNPRVHICF 125
+E + R FS FG ++ I + P + AF+ F + A +A+ L G +F + + F
Sbjct: 188 STEEEV-RHLFSQFGYLQAIKIIPNKQCAFITFADVNCAIQAQFNLNGTIFRGLPLKLGF 246
Query: 126 AKSEAG--ANSGRGSLNAPSSPH 146
K E AN G G + + PH
Sbjct: 247 GKVENAPQANFGGGRFDQYNKPH 269
>WB|WBGene00012904 [details] [associations]
symbol:tiar-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HSSP:P11940 EMBL:AL110485 GeneTree:ENSGT00680000099967
HOGENOM:HOG000206748 KO:K13201 RefSeq:NP_496718.1 UniGene:Cel.14057
ProteinModelPortal:Q9U2F5 SMR:Q9U2F5 IntAct:Q9U2F5 PaxDb:Q9U2F5
EnsemblMetazoa:Y46G5A.13 GeneID:174909 KEGG:cel:CELE_Y46G5A.13
UCSC:Y46G5A.13 CTD:174909 WormBase:Y46G5A.13 InParanoid:Q9U2F5
NextBio:886000 Uniprot:Q9U2F5
Length = 434
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 46/152 (30%), Positives = 70/152 (46%)
Query: 5 PSHDGEYLQHRDEQRTGLRGSPFSQRDSRLRHFSPDSEKSKMTDKNAEPSEVLWIGFPAL 64
P DGE R ++R G G RD H + ++ ++ A + +++G A
Sbjct: 212 PDEDGERGGDRGDRRGGGGGG----RDRY--HNQSEKTYDEIFNQAAADNTSVYVGNIAN 265
Query: 65 LKVDEVILRKAFSPFGEIEKITVFPGRSYAFVQFRSIISACRAKETLQGKLFGNPRVHIC 124
L DE+ R+AF FG I ++ F + YAFV+F + SA RA + G V
Sbjct: 266 LGEDEI--RRAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCS 323
Query: 125 FAKS-EAGANSGRGSLNAPSSPHFKLN-GRSG 154
+ KS ++G S RGS S ++ G SG
Sbjct: 324 WGKSGDSGKPSERGSGGGGGSGNYGYGYGNSG 355
>UNIPROTKB|F8WE16 [details] [associations]
symbol:TIA1 "Nucleolysin TIA-1 isoform p40" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0042036 "negative regulation of cytokine
biosynthetic process" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0017148 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0042036 EMBL:AC016700
HGNC:HGNC:11802 ChiTaRS:TIA1 IPI:IPI00926546
ProteinModelPortal:F8WE16 SMR:F8WE16 Ensembl:ENST00000454815
ArrayExpress:F8WE16 Bgee:F8WE16 Uniprot:F8WE16
Length = 114
Score = 101 (40.6 bits), Expect = 0.00028, P = 0.00028
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 72 LRKAFSPFGEIEKITVFPGRSYAFVQFRSIISACRAKETLQG 113
+R+ FSPFG+I +I VFP + Y+FV+F S SA A ++ G
Sbjct: 1 MRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 42
>ASPGD|ASPL0000066087 [details] [associations]
symbol:AN7474 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001313 InterPro:IPR012677
InterPro:IPR016024 Pfam:PF00076 Pfam:PF00806 PROSITE:PS50102
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 SMART:SM00360
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304
eggNOG:COG5099 OrthoDB:EOG4MWCFG RefSeq:XP_680743.1
ProteinModelPortal:Q5AW56 EnsemblFungi:CADANIAT00000567
GeneID:2869548 KEGG:ani:AN7474.2 HOGENOM:HOG000182368 OMA:RACLESH
Uniprot:Q5AW56
Length = 1175
Score = 129 (50.5 bits), Expect = 0.00028, P = 0.00028
Identities = 45/141 (31%), Positives = 65/141 (46%)
Query: 48 DKNAE--PSEVLWIG-FPALLKVDEVILRKAFSPFGEIEKITVFPGRSYAFVQFRSIISA 104
D+N + P+ LWIG P V L FS +G+IE V ++ FV F I SA
Sbjct: 470 DENNQDGPTRALWIGSIPVSTTVTS--LEAIFSMYGKIESTRVLTHKNCGFVNFERIESA 527
Query: 105 CRAKETLQGK-LF-GNPRVHICFAKSEAGANSGRGSLN-APSSPHFKLNGRSG--SSENF 159
+A+ L GK +F G V I +AK +N+G +N A SSP N +S E
Sbjct: 528 IQARSLLNGKEIFPGAGAVRIGYAKVPGSSNAGTPGVNGAQSSPTPDPNSKSTIPDEEKL 587
Query: 160 RPARNFGSFAGDPSVRSPQLI 180
N P ++ P+++
Sbjct: 588 SSGSNVPQIPALPDLQ-PEIV 607
>DICTYBASE|DDB_G0279639 [details] [associations]
symbol:DDB_G0279639 "RNA-binding region RNP-1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR003034 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02037 PROSITE:PS50102 PROSITE:PS50800
SMART:SM00360 SMART:SM00513 dictyBase:DDB_G0279639 GO:GO:0000166
GO:GO:0003677 Gene3D:3.30.70.330 Gene3D:1.10.720.30
EMBL:AAFI02000032 eggNOG:NOG135032 RefSeq:XP_641568.1
ProteinModelPortal:Q54WI5 EnsemblProtists:DDB0220678 GeneID:8622143
KEGG:ddi:DDB_G0279639 InParanoid:Q54WI5 OMA:ENTNTNE Uniprot:Q54WI5
Length = 1009
Score = 126 (49.4 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 69/290 (23%), Positives = 114/290 (39%)
Query: 68 DEVILRKAFSPFGEIEKITVFPG-----RSYAFVQFRSIISACRAKETLQGKLFGNPRVH 122
D ILRK FSPFG+I+ V P R +AF+ + ++ A +A+ + K ++
Sbjct: 501 DVPILRKVFSPFGKIKDCNVVPNYYGQPRGFAFIDYNNVEDAEKAQRMMNEKDLKGYKIR 560
Query: 123 ICFAK-SEAGAN--------SGRGSLNAPSSPHFKLNGRSGSSENFRP--ARNFGSFAGD 171
+ FA S+ G + SGR + PSS F+ GR S P +++FG +
Sbjct: 561 VNFANPSKPGHSLVKPPSQQSGRSHESVPSSSPFRGRGRGRGSMGVPPPNSQHFGIGSVG 620
Query: 172 PSVRSPQLISNLDSGDADVYNFNRKGTLWSSGNNAYEPMRLGEVRNEPGLSQDMYEHRMS 231
R + + + +Y R G G N P+ + R P M+
Sbjct: 621 GGFRGGRGVGGYPGDHSGIYQGGRGGR-GVGGVNGSGPIAME--RGGP-----MHHQPYG 672
Query: 232 PPIERTPHFHEVPHKRPVYEESWDSPEDSYYQPGAKKLKIGSF-----PPDKELPEYPFS 286
PP P H+ + + + + + +Y + G+F PP LP
Sbjct: 673 PPPHHGPMLHQSGYGSQM-QHQFSQMQHQHYNEHQRNQ--GAFYPPPPPPHMNLPMQSQQ 729
Query: 287 DLEQEKHTFSRTYSDFSQPEVFDK-NLDAGPFGYKQIPDQQMNLALPCRE 335
Q ++ S S+ + P + + NL A Q+ Q M L +E
Sbjct: 730 GYPQV-NSMSVPQSN-NNPLINQQANLQAQQLASAQVQIQLMEQKLKGQE 777
Score = 47 (21.6 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 22/60 (36%), Positives = 29/60 (48%)
Query: 670 QPEQLAQLASTLLGQQGQA----GFTPNVSTAENQRQTATGHQSD-SPLRSSQVYALQNN 724
Q +Q AQ S QQ Q+ GF ++ A + +QT G QS SP +S QNN
Sbjct: 862 QAQQQAQQQSQQQAQQQQSQQMQGFYGQMNNANSNKQT--GAQSTISPNTASATN--QNN 917
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.131 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 806 777 0.00094 121 3 11 23 0.47 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 622 (66 KB)
Total size of DFA: 413 KB (2198 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 81.71u 0.08s 81.79t Elapsed: 00:00:46
Total cpu time: 81.71u 0.08s 81.79t Elapsed: 00:00:47
Start: Fri May 10 21:01:22 2013 End: Fri May 10 21:02:09 2013