Your job contains 1 sequence.
>037077
NLEAVQQFGKLWQLEPEDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSI
KKMEKEIKNMAKKVNDLCGIELCYKCVHFTHLVARCTNIINLNSEDAKYVINVKQIAK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037077
(118 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024822 - symbol:RPT1A "regulatory particle tr... 201 1.7e-15 1
UNIPROTKB|P46472 - symbol:psmc2 "26S protease regulatory ... 103 2.5e-13 2
ZFIN|ZDB-GENE-040426-1327 - symbol:psmc2 "proteasome (pro... 103 3.2e-13 2
MGI|MGI:109555 - symbol:Psmc2 "proteasome (prosome, macro... 103 5.1e-13 2
UNIPROTKB|F1NFL8 - symbol:PSMC2 "Uncharacterized protein"... 103 4.3e-12 2
GENEDB_PFALCIPARUM|PF13_0063 - symbol:PF13_0063 "26S prot... 96 1.1e-11 2
UNIPROTKB|Q8IEK3 - symbol:PF13_0063 "26S proteasome regul... 96 1.1e-11 2
UNIPROTKB|E1C4V5 - symbol:PSMC2 "Uncharacterized protein"... 103 3.5e-11 2
WB|WBGene00004501 - symbol:rpt-1 species:6239 "Caenorhabd... 99 8.0e-11 2
UNIPROTKB|Q18787 - symbol:rpt-1 "26S protease regulatory ... 99 8.0e-11 2
UNIPROTKB|C9JLS9 - symbol:PSMC2 "26S protease regulatory ... 147 2.0e-10 1
UNIPROTKB|Q5E9F9 - symbol:PSMC2 "26S protease regulatory ... 147 1.4e-09 1
UNIPROTKB|F1PPH7 - symbol:PSMC2 "Uncharacterized protein"... 147 1.4e-09 1
UNIPROTKB|P35998 - symbol:PSMC2 "26S protease regulatory ... 147 1.4e-09 1
UNIPROTKB|Q4R4R0 - symbol:PSMC2 "26S protease regulatory ... 147 1.4e-09 1
RGD|3428 - symbol:Psmc2 "proteasome (prosome, macropain) ... 147 1.4e-09 1
UNIPROTKB|Q63347 - symbol:Psmc2 "26S protease regulatory ... 147 1.4e-09 1
UNIPROTKB|F1SB53 - symbol:PSMC2 "Uncharacterized protein"... 147 1.6e-09 1
ASPGD|ASPL0000034636 - symbol:AN2917 species:162425 "Emer... 87 1.6e-09 2
UNIPROTKB|Q5R8D7 - symbol:PSMC2 "26S protease regulatory ... 141 6.1e-09 1
FB|FBgn0028687 - symbol:Rpt1 "Regulatory particle triple-... 131 7.4e-08 1
DICTYBASE|DDB_G0276917 - symbol:psmC2 "26S proteasome ATP... 129 1.2e-07 1
TAIR|locus:2197021 - symbol:AT1G53790 species:3702 "Arabi... 128 1.7e-07 1
POMBASE|SPBC16C6.07c - symbol:rpt1 "19S proteasome regula... 113 6.7e-06 1
UNIPROTKB|I3LJ30 - symbol:I3LJ30 "Uncharacterized protein... 103 7.9e-05 1
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 201 (75.8 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 42/65 (64%), Positives = 50/65 (76%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDEI++EKNPRP DEDDIALLKT + LGPYS IKK+EKEIK++AKK+ND
Sbjct: 6 EDEIRDEKNPRPLDEDDIALLKT-----------YGLGPYSAPIKKVEKEIKDLAKKIND 54
Query: 77 LCGIE 81
LCGI+
Sbjct: 55 LCGIK 59
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 103 (41.3 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 20/26 (76%), Positives = 22/26 (84%)
Query: 93 VARCTNIINLNSEDAKYVINVKQIAK 118
VARCT IIN +SED KY+INVKQ AK
Sbjct: 95 VARCTKIINADSEDPKYIINVKQFAK 120
Score = 102 (41.0 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 13 QLEPEDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAK 72
Q + ++E KE+K R DE DIALLKT + YS IK++E +I+ + K
Sbjct: 9 QRKTKEEEKEDKPIRSLDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLK 57
Query: 73 KVNDLCGIE 81
K+N+L GI+
Sbjct: 58 KINELTGIK 66
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 103 (41.3 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 20/26 (76%), Positives = 22/26 (84%)
Query: 93 VARCTNIINLNSEDAKYVINVKQIAK 118
VARCT IIN +SED KY+INVKQ AK
Sbjct: 95 VARCTKIINADSEDPKYIINVKQFAK 120
Score = 101 (40.6 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 13 QLEPEDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAK 72
Q + ++E KE+K R DE DIALLKT + YS IK++E +I+ + K
Sbjct: 9 QRKVKEEEKEDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLK 57
Query: 73 KVNDLCGIE 81
K+N+L GI+
Sbjct: 58 KINELTGIK 66
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 103 (41.3 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 20/26 (76%), Positives = 22/26 (84%)
Query: 93 VARCTNIINLNSEDAKYVINVKQIAK 118
VARCT IIN +SED KY+INVKQ AK
Sbjct: 95 VARCTKIINADSEDPKYIINVKQFAK 120
Score = 99 (39.9 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 13 QLEPEDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAK 72
Q + ++E K++K R DE DIALLKT + YS IK++E +I+ + K
Sbjct: 9 QRKTKEEEKDDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLK 57
Query: 73 KVNDLCGIE 81
K+N+L GI+
Sbjct: 58 KINELTGIK 66
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 103 (41.3 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 20/26 (76%), Positives = 22/26 (84%)
Query: 93 VARCTNIINLNSEDAKYVINVKQIAK 118
VARCT IIN +SED KY+INVKQ AK
Sbjct: 94 VARCTKIINADSEDPKYIINVKQFAK 119
Score = 90 (36.7 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
++E KE+K+ DE DIALLKT + YS IK++E +I+ + KK+N+
Sbjct: 13 KEEEKEDKHSSL-DEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINE 60
Query: 77 LCGIE 81
L GI+
Sbjct: 61 LTGIK 65
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 96 (38.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 18/26 (69%), Positives = 22/26 (84%)
Query: 93 VARCTNIINLNSEDAKYVINVKQIAK 118
VARCT IIN +++ KY+INVKQIAK
Sbjct: 82 VARCTKIINADTDQTKYIINVKQIAK 107
Score = 93 (37.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 20 IKEEKNP--RPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVNDL 77
++EE N +P D++DI +LK S+ GPYS +IKK+E +I + +N L
Sbjct: 1 MEEETNTQSKPLDDEDINILK-----------SYGSGPYSKTIKKVEGDISGLLVNINKL 49
Query: 78 CGI 80
CG+
Sbjct: 50 CGV 52
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 96 (38.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 18/26 (69%), Positives = 22/26 (84%)
Query: 93 VARCTNIINLNSEDAKYVINVKQIAK 118
VARCT IIN +++ KY+INVKQIAK
Sbjct: 82 VARCTKIINADTDQTKYIINVKQIAK 107
Score = 93 (37.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 20 IKEEKNP--RPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVNDL 77
++EE N +P D++DI +LK S+ GPYS +IKK+E +I + +N L
Sbjct: 1 MEEETNTQSKPLDDEDINILK-----------SYGSGPYSKTIKKVEGDISGLLVNINKL 49
Query: 78 CGI 80
CG+
Sbjct: 50 CGV 52
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 103 (41.3 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 20/26 (76%), Positives = 22/26 (84%)
Query: 93 VARCTNIINLNSEDAKYVINVKQIAK 118
VARCT IIN +SED KY+INVKQ AK
Sbjct: 86 VARCTKIINADSEDPKYIINVKQFAK 111
Score = 81 (33.6 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 30 DEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVNDLCGIE 81
DE DIALLKT + YS IK++E +I+ + KK+N+L GI+
Sbjct: 17 DEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINELTGIK 57
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 99 (39.9 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
+D +EEKN + DE DIA+LK + GPY+ +K ++ +I+N KKVN+
Sbjct: 15 DDTKEEEKNFQALDEGDIAVLKR-----------YGQGPYAEQLKTLDADIENCLKKVNE 63
Query: 77 LCGIE 81
L G++
Sbjct: 64 LSGVK 68
Score = 82 (33.9 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 93 VARCTNIINLNSEDAKYVINVKQIAK 118
VARCT II + D +Y+INVKQ AK
Sbjct: 97 VARCTKIITSDKHDPRYLINVKQFAK 122
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 99 (39.9 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
+D +EEKN + DE DIA+LK + GPY+ +K ++ +I+N KKVN+
Sbjct: 15 DDTKEEEKNFQALDEGDIAVLKR-----------YGQGPYAEQLKTLDADIENCLKKVNE 63
Query: 77 LCGIE 81
L G++
Sbjct: 64 LSGVK 68
Score = 82 (33.9 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 93 VARCTNIINLNSEDAKYVINVKQIAK 118
VARCT II + D +Y+INVKQ AK
Sbjct: 97 VARCTKIITSDKHDPRYLINVKQFAK 122
>UNIPROTKB|C9JLS9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
GO:GO:0005739 GO:GO:0005634 EMBL:AC004668 OrthoDB:EOG4RXZ05
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 IPI:IPI00927053
STRING:C9JLS9 Ensembl:ENST00000425206 Ensembl:ENST00000457587
UCSC:uc011kln.2 HOGENOM:HOG000169589 Uniprot:C9JLS9
Length = 130
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 49/119 (41%), Positives = 62/119 (52%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDE K++K R DE DIALLKT + YS IK++E +I+ + KK+N+
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINE 61
Query: 77 LCGIE----------LCYKCVHFTHL-------VARCTNIINLNSEDAKYVINVKQIAK 118
L GI+ L L VARCT IIN +SED KY+INVKQ AK
Sbjct: 62 LTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 120
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 147 (56.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 49/119 (41%), Positives = 62/119 (52%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDE K++K R DE DIALLKT + YS IK++E +I+ + KK+N+
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINE 61
Query: 77 LCGIE----------LCYKCVHFTHL-------VARCTNIINLNSEDAKYVINVKQIAK 118
L GI+ L L VARCT IIN +SED KY+INVKQ AK
Sbjct: 62 LTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 120
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 147 (56.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 49/119 (41%), Positives = 62/119 (52%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDE K++K R DE DIALLKT + YS IK++E +I+ + KK+N+
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINE 61
Query: 77 LCGIE----------LCYKCVHFTHL-------VARCTNIINLNSEDAKYVINVKQIAK 118
L GI+ L L VARCT IIN +SED KY+INVKQ AK
Sbjct: 62 LTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 120
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 147 (56.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 49/119 (41%), Positives = 62/119 (52%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDE K++K R DE DIALLKT + YS IK++E +I+ + KK+N+
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINE 61
Query: 77 LCGIE----------LCYKCVHFTHL-------VARCTNIINLNSEDAKYVINVKQIAK 118
L GI+ L L VARCT IIN +SED KY+INVKQ AK
Sbjct: 62 LTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 120
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 147 (56.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 49/119 (41%), Positives = 62/119 (52%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDE K++K R DE DIALLKT + YS IK++E +I+ + KK+N+
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINE 61
Query: 77 LCGIE----------LCYKCVHFTHL-------VARCTNIINLNSEDAKYVINVKQIAK 118
L GI+ L L VARCT IIN +SED KY+INVKQ AK
Sbjct: 62 LTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 120
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 147 (56.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 49/119 (41%), Positives = 62/119 (52%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDE K++K R DE DIALLKT + YS IK++E +I+ + KK+N+
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINE 61
Query: 77 LCGIE----------LCYKCVHFTHL-------VARCTNIINLNSEDAKYVINVKQIAK 118
L GI+ L L VARCT IIN +SED KY+INVKQ AK
Sbjct: 62 LTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 120
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 147 (56.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 49/119 (41%), Positives = 62/119 (52%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDE K++K R DE DIALLKT + YS IK++E +I+ + KK+N+
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINE 61
Query: 77 LCGIE----------LCYKCVHFTHL-------VARCTNIINLNSEDAKYVINVKQIAK 118
L GI+ L L VARCT IIN +SED KY+INVKQ AK
Sbjct: 62 LTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 120
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 147 (56.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 49/119 (41%), Positives = 62/119 (52%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDE K++K R DE DIALLKT + YS IK++E +I+ + KK+N+
Sbjct: 56 EDE-KDDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINE 103
Query: 77 LCGIE----------LCYKCVHFTHL-------VARCTNIINLNSEDAKYVINVKQIAK 118
L GI+ L L VARCT IIN +SED KY+INVKQ AK
Sbjct: 104 LTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 162
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 87 (35.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 18 DEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVNDL 77
D+ + EK P ++DIA+LKT + PY+ ++KK+EK+IK VN+
Sbjct: 18 DDEEPEKKITPLTDEDIAVLKT-----------YGAAPYANALKKLEKQIKERQASVNEK 66
Query: 78 CGIE 81
G++
Sbjct: 67 IGVK 70
Score = 82 (33.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 19/28 (67%), Positives = 22/28 (78%)
Query: 93 VARCTNIIN--LNSEDAKYVINVKQIAK 118
VARCT II +S+ +KYVINVKQIAK
Sbjct: 99 VARCTKIIQDEKDSDKSKYVINVKQIAK 126
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 141 (54.7 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 48/119 (40%), Positives = 61/119 (51%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDE K++K R DE DIALLKT + YS IK++E +I+ + KK+N+
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINE 61
Query: 77 LCGIE----------LCYKCVHFTHL-------VARCTNIINLNSEDAKYVINVKQIAK 118
L GI+ L L VARCT II +SED KY+INVKQ AK
Sbjct: 62 LTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIITADSEDPKYIINVKQFAK 120
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 131 (51.2 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 44/118 (37%), Positives = 59/118 (50%)
Query: 18 DEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVNDL 77
DE KE+K + DE DI LLKT + Y SIK +E++I+ K+VN+L
Sbjct: 15 DE-KEDKEIKSLDEGDIELLKT-----------YGQSQYHKSIKSIEEDIQKAVKQVNEL 62
Query: 78 CGIE---------LCYKCVHFTHL--------VARCTNIINLNSEDAKYVINVKQIAK 118
GI+ + + VARCT IIN +S+D KY+INVKQ AK
Sbjct: 63 TGIKESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAK 120
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 129 (50.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/65 (47%), Positives = 40/65 (61%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDE+ E P DE DIALLK S+ +GPYS SI+ +E++IK M KVN+
Sbjct: 8 EDELLNETAPVALDEGDIALLK-----------SYGVGPYSKSIRILEEDIKKMTSKVNE 56
Query: 77 LCGIE 81
LCGI+
Sbjct: 57 LCGIK 61
>TAIR|locus:2197021 [details] [associations]
symbol:AT1G53790 species:3702 "Arabidopsis thaliana"
[GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0019773 "proteasome core
complex, alpha-subunit complex" evidence=IEA] InterPro:IPR000426
InterPro:IPR001810 Pfam:PF00646 Pfam:PF10584 PROSITE:PS50181
SMART:SM00256 EMBL:CP002684 SUPFAM:SSF81383 GO:GO:0004175
GO:GO:0006511 EMBL:AC009324 InterPro:IPR017451 TIGRFAMs:TIGR01640
HOGENOM:HOG000064703 InterPro:IPR013187 Pfam:PF08268 GO:GO:0019773
IPI:IPI00891029 RefSeq:NP_001117485.1 UniGene:At.66811
ProteinModelPortal:B3H7F2 SMR:B3H7F2 PRIDE:B3H7F2
EnsemblPlants:AT1G53790.2 GeneID:841816 KEGG:ath:AT1G53790
OMA:YFNLESK ProtClustDB:CLSN2680482 Genevestigator:B3H7F2
Uniprot:B3H7F2
Length = 461
Score = 128 (50.1 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 29/54 (53%), Positives = 36/54 (66%)
Query: 28 PPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVNDLCGIE 81
P DEDDIAL+KT + L PYS IKK+EKEIK + +K+NDLCGI+
Sbjct: 9 PLDEDDIALVKT-----------YGLVPYSAPIKKVEKEIKELTEKINDLCGIK 51
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 113 (44.8 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 42/125 (33%), Positives = 63/125 (50%)
Query: 15 EPED-EIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKK 73
+P D E + +KNP P DE DI LLK S++ GPY+ + ++++ + + K+
Sbjct: 12 KPVDTEEENDKNPPPLDEGDIELLK-----------SYATGPYARELAAIKEDTEAVLKR 60
Query: 74 VNDLCGI---ELCYKCVHFTHL--------------VARCTNIINLNSEDAK---YVINV 113
+ND GI + + F + VARCT II N + A+ YVIN+
Sbjct: 61 INDTVGIKESDTGLAPISFWDVAADRQRMSEEQPLQVARCTKIIE-NEQSAEKNAYVINL 119
Query: 114 KQIAK 118
KQIAK
Sbjct: 120 KQIAK 124
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 103 (41.3 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 39/111 (35%), Positives = 57/111 (51%)
Query: 19 EIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAK-KVNDL 77
E+ ++ R DE DIALLKT + ++ S + I+++ K+I + K +D
Sbjct: 16 ELNRKELLRALDEGDIALLKT-YGQSTY---SRQIKQVEDDIQQLLKKINELTGIKESDT 71
Query: 78 CGI------ELCYKCVHFTHLVA----RCTNIINLNSEDAKYVINVKQIAK 118
G+ +L Y+ A RCT IIN +SED KY+INVKQ AK
Sbjct: 72 -GLAPPALWDLAYENQELRSNQAFCRVRCTKIINADSEDPKYIINVKQFAK 121
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 118 118 0.00091 102 3 11 22 0.37 31
29 0.47 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 570 (61 KB)
Total size of DFA: 132 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.61u 0.12s 14.73t Elapsed: 00:00:01
Total cpu time: 14.61u 0.12s 14.73t Elapsed: 00:00:01
Start: Fri May 10 21:14:13 2013 End: Fri May 10 21:14:14 2013