BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037077
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FXT9|PRS7_ORYSJ 26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica
GN=RPT1A PE=2 SV=1
Length = 426
Score = 114 bits (286), Expect = 1e-25, Method: Composition-based stats.
Identities = 68/121 (56%), Positives = 78/121 (64%), Gaps = 28/121 (23%)
Query: 15 EPEDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKV 74
EPED+I EKNPRP DEDDIALLKT + LGPYSTSIKK+EKEIK MAKK+
Sbjct: 4 EPEDDIMNEKNPRPLDEDDIALLKT-----------YGLGPYSTSIKKVEKEIKEMAKKI 52
Query: 75 NDLCGIELC---------YKCVHFTHL--------VARCTNIINLNSEDAKYVINVKQIA 117
NDLCGI+ + V + VARCT II+ N++DAKYVINVKQIA
Sbjct: 53 NDLCGIKESDTGLAPPSQWDLVSDKQMMQEEQPLQVARCTKIISPNTDDAKYVINVKQIA 112
Query: 118 K 118
K
Sbjct: 113 K 113
>sp|O64982|PRS7_PRUPE 26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2
SV=1
Length = 425
Score = 113 bits (283), Expect = 3e-25, Method: Composition-based stats.
Identities = 70/121 (57%), Positives = 78/121 (64%), Gaps = 29/121 (23%)
Query: 15 EPEDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKV 74
EPED IK+EKNPRP DEDDIALLKT + LGPYST IKK EKE+K++AKKV
Sbjct: 4 EPED-IKDEKNPRPLDEDDIALLKT-----------YGLGPYSTHIKKAEKEVKDLAKKV 51
Query: 75 NDLCGIELC---------YKCVHFTHL--------VARCTNIINLNSEDAKYVINVKQIA 117
NDLCGI+ + V + VARCT IIN NSEDAKYVINVKQIA
Sbjct: 52 NDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIA 111
Query: 118 K 118
K
Sbjct: 112 K 112
>sp|Q41365|PRS7_SPIOL 26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2
SV=1
Length = 426
Score = 111 bits (278), Expect = 1e-24, Method: Composition-based stats.
Identities = 67/122 (54%), Positives = 79/122 (64%), Gaps = 28/122 (22%)
Query: 14 LEPEDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKK 73
+E ED++K+EKNPRP DEDDIALLKT + LGPYS SIKK+EKEIK+M+KK
Sbjct: 3 IEHEDDLKDEKNPRPLDEDDIALLKT-----------YGLGPYSASIKKVEKEIKDMSKK 51
Query: 74 VNDLCGIELC---------YKCVHFTHL--------VARCTNIINLNSEDAKYVINVKQI 116
VNDL GI+ + V + VARCT IIN N+EDAKYVINVKQI
Sbjct: 52 VNDLIGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNTEDAKYVINVKQI 111
Query: 117 AK 118
AK
Sbjct: 112 AK 113
>sp|Q9SSB5|PRS7A_ARATH 26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana
GN=RPT1A PE=2 SV=1
Length = 426
Score = 110 bits (274), Expect = 3e-24, Method: Composition-based stats.
Identities = 65/119 (54%), Positives = 77/119 (64%), Gaps = 28/119 (23%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDEI++EKNPRP DEDDIALLKT + LGPYS IKK+EKEIK++AKK+ND
Sbjct: 6 EDEIRDEKNPRPLDEDDIALLKT-----------YGLGPYSAPIKKVEKEIKDLAKKIND 54
Query: 77 LCGIELC---------YKCVHFTHL--------VARCTNIINLNSEDAKYVINVKQIAK 118
LCGI+ + V + VARCT II+ N+EDAKYVINVKQIAK
Sbjct: 55 LCGIKESDTGLAPPSQWDLVSDKQMMQEEQPLQVARCTKIISPNTEDAKYVINVKQIAK 113
>sp|Q86JA1|PRS7_DICDI 26S protease regulatory subunit 7 OS=Dictyostelium discoideum
GN=psmC2 PE=1 SV=1
Length = 428
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/119 (41%), Positives = 63/119 (52%), Gaps = 28/119 (23%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDE+ E P DE DIALLK S+ +GPYS SI+ +E++IK M KVN+
Sbjct: 8 EDELLNETAPVALDEGDIALLK-----------SYGVGPYSKSIRILEEDIKKMTSKVNE 56
Query: 77 LCGIELCYKCV------------HFTH-----LVARCTNIINLNSEDAKYVINVKQIAK 118
LCGI+ + H VARCT II++ +AKY+I VKQIAK
Sbjct: 57 LCGIKESDTGIGPPSQWDLVVDKTSAHEEPPLQVARCTKIIDVGKPNAKYIITVKQIAK 115
>sp|P46471|PRS7_MOUSE 26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1
SV=5
Length = 433
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 64/123 (52%), Gaps = 28/123 (22%)
Query: 13 QLEPEDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAK 72
Q + ++E K++K R DE DIALLKT + YS IK++E +I+ + K
Sbjct: 9 QRKTKEEEKDDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLK 57
Query: 73 KVNDLCGIELCYKCVHFTHL-----------------VARCTNIINLNSEDAKYVINVKQ 115
K+N+L GI+ + L VARCT IIN +SED KY+INVKQ
Sbjct: 58 KINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQ 117
Query: 116 IAK 118
AK
Sbjct: 118 FAK 120
>sp|Q4R4R0|PRS7_MACFA 26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2
PE=2 SV=3
Length = 433
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 48/119 (40%), Positives = 62/119 (52%), Gaps = 29/119 (24%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDE K++K R DE DIALLKT + YS IK++E +I+ + KK+N+
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINE 61
Query: 77 LCGIELCYKCVHFTHL-----------------VARCTNIINLNSEDAKYVINVKQIAK 118
L GI+ + L VARCT IIN +SED KY+INVKQ AK
Sbjct: 62 LTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 120
>sp|P35998|PRS7_HUMAN 26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1
SV=3
Length = 433
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 48/119 (40%), Positives = 62/119 (52%), Gaps = 29/119 (24%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDE K++K R DE DIALLKT + YS IK++E +I+ + KK+N+
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINE 61
Query: 77 LCGIELCYKCVHFTHL-----------------VARCTNIINLNSEDAKYVINVKQIAK 118
L GI+ + L VARCT IIN +SED KY+INVKQ AK
Sbjct: 62 LTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 120
>sp|Q5E9F9|PRS7_BOVIN 26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3
Length = 433
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 48/119 (40%), Positives = 62/119 (52%), Gaps = 29/119 (24%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDE K++K R DE DIALLKT + YS IK++E +I+ + KK+N+
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINE 61
Query: 77 LCGIELCYKCVHFTHL-----------------VARCTNIINLNSEDAKYVINVKQIAK 118
L GI+ + L VARCT IIN +SED KY+INVKQ AK
Sbjct: 62 LTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 120
>sp|Q63347|PRS7_RAT 26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2
PE=1 SV=3
Length = 433
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 48/119 (40%), Positives = 62/119 (52%), Gaps = 29/119 (24%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDE K++K R DE DIALLKT + YS IK++E +I+ + KK+N+
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINE 61
Query: 77 LCGIELCYKCVHFTHL-----------------VARCTNIINLNSEDAKYVINVKQIAK 118
L GI+ + L VARCT IIN +SED KY+INVKQ AK
Sbjct: 62 LTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 120
>sp|Q5R8D7|PRS7_PONAB 26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2
SV=3
Length = 433
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/119 (39%), Positives = 61/119 (51%), Gaps = 29/119 (24%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
EDE K++K R DE DIALLKT + YS IK++E +I+ + KK+N+
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINE 61
Query: 77 LCGIELCYKCVHFTHL-----------------VARCTNIINLNSEDAKYVINVKQIAK 118
L GI+ + L VARCT II +SED KY+INVKQ AK
Sbjct: 62 LTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIITADSEDPKYIINVKQFAK 120
>sp|P46472|PRS7_XENLA 26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2
SV=1
Length = 433
Score = 62.4 bits (150), Expect = 9e-10, Method: Composition-based stats.
Identities = 43/109 (39%), Positives = 55/109 (50%), Gaps = 28/109 (25%)
Query: 27 RPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVNDLCGIELCYKC 86
R DE DIALLKT + YS IK++E +I+ + KK+N+L GI+
Sbjct: 23 RSLDEGDIALLKT-----------YGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTG 71
Query: 87 VHFTHL-----------------VARCTNIINLNSEDAKYVINVKQIAK 118
+ L VARCT IIN +SED KY+INVKQ AK
Sbjct: 72 LAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK 120
>sp|Q18787|PRS7_CAEEL 26S protease regulatory subunit 7 OS=Caenorhabditis elegans
GN=rpt-1 PE=1 SV=1
Length = 435
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 28/119 (23%)
Query: 17 EDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVND 76
+D +EEKN + DE DIA+LK + GPY+ +K ++ +I+N KKVN+
Sbjct: 15 DDTKEEEKNFQALDEGDIAVLK-----------RYGQGPYAEQLKTLDADIENCLKKVNE 63
Query: 77 LCGIELCYKCVHFTHL-----------------VARCTNIINLNSEDAKYVINVKQIAK 118
L G++ + L VARCT II + D +Y+INVKQ AK
Sbjct: 64 LSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQFAK 122
>sp|Q0WQM8|FB58_ARATH F-box protein At1g53790 OS=Arabidopsis thaliana GN=At1g53790 PE=2
SV=1
Length = 444
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 11/54 (20%)
Query: 28 PPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVNDLCGIE 81
P DEDDIAL+KT + L PYS IKK+EKEIK + +K+NDLCGI+
Sbjct: 9 PLDEDDIALVKT-----------YGLVPYSAPIKKVEKEIKELTEKINDLCGIK 51
>sp|O42931|PRS7_SCHPO 26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rpt1 PE=1 SV=2
Length = 438
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 30/126 (23%)
Query: 12 WQLEPEDEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMA 71
+Q + E + +KNP P DE DI LLK S++ GPY+ + ++++ + +
Sbjct: 10 YQKPVDTEEENDKNPPPLDEGDIELLK-----------SYATGPYARELAAIKEDTEAVL 58
Query: 72 KKVNDLCGI---ELCYKCVHFTHL--------------VARCTNII--NLNSEDAKYVIN 112
K++ND GI + + F + VARCT II ++E YVIN
Sbjct: 59 KRINDTVGIKESDTGLAPISFWDVAADRQRMSEEQPLQVARCTKIIENEQSAEKNAYVIN 118
Query: 113 VKQIAK 118
+KQIAK
Sbjct: 119 LKQIAK 124
>sp|Q9SSB4|PRS7B_ARATH 26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana
GN=RPT1B PE=2 SV=2
Length = 464
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 18/81 (22%)
Query: 55 PYSTSIKKMEKEIKNMAKKVNDLCGIELC---------YKCVHFTH--------LVARCT 97
PYS IKK+EKEI +A+K+ +L GI+ + V LVA CT
Sbjct: 71 PYSARIKKVEKEINELAEKICNL-GIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCT 129
Query: 98 NIINLNSEDAKYVINVKQIAK 118
II+ N+EDAKYV+++K+I K
Sbjct: 130 QIISPNTEDAKYVVDIKKIGK 150
>sp|P33299|PRS7_YEAST 26S protease regulatory subunit 7 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT1 PE=1
SV=1
Length = 467
Score = 36.2 bits (82), Expect = 0.058, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 52/138 (37%), Gaps = 58/138 (42%)
Query: 28 PPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVNDLCGIELCYKCV 87
P E DI +LK S+ PY+ +K+ E ++K++ ++ + G++ +
Sbjct: 28 PLTEGDIQVLK-----------SYGAAPYAAKLKQTENDLKDIEARIKEKAGVKESDTGL 76
Query: 88 HFTHL-----------------VARCTNIINLNSED------------------------ 106
+HL VARCT II N E
Sbjct: 77 APSHLWDIMGDRQRLGEEHPLQVARCTKIIKGNGESDETTTDNNNSGNSNSNSNQQSTDA 136
Query: 107 ------AKYVINVKQIAK 118
AKYVIN+KQIAK
Sbjct: 137 DEDDEDAKYVINLKQIAK 154
>sp|Q8MIK0|ANDR_CROCR Androgen receptor OS=Crocuta crocuta GN=AR PE=2 SV=1
Length = 912
Score = 35.0 bits (79), Expect = 0.16, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 22 EEKNPRPPDEDDIALLKTCIRKLSFLNPSF-SLGPYSTSIKKMEKEIKNM 70
E++ P PPDEDD A T LS L P+F L ST +K + E M
Sbjct: 131 EQQQPAPPDEDDSAAPST----LSLLGPTFPGLSSCSTDLKDILSEAGTM 176
>sp|Q9GKL7|ANDR_PIG Androgen receptor OS=Sus scrofa GN=AR PE=2 SV=3
Length = 896
Score = 32.7 bits (73), Expect = 0.77, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 22 EEKNPRPPDEDDIALLKTCIRKLSFLNPSF-SLGPYSTSIKKMEKEIKNM 70
+++ P PPDEDD A T LS L P+F L ST +K + E M
Sbjct: 131 QQQPPAPPDEDDSAAPST----LSLLGPTFPGLSSCSTDLKDILSEAGTM 176
>sp|O97952|ANDR_MACFA Androgen receptor OS=Macaca fascicularis GN=AR PE=2 SV=1
Length = 895
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 26 PRPPDEDDIALLKTCIRKLSFLNPSF-SLGPYSTSIKKMEKEIKNM 70
P PPDEDD A T LS L P+F L ST +K + E M
Sbjct: 133 PAPPDEDDSAAPST----LSLLGPTFPGLSSCSTDLKDILSEASTM 174
>sp|Q9TT90|ANDR_CANFA Androgen receptor OS=Canis familiaris GN=AR PE=2 SV=1
Length = 907
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 22 EEKNPRPPDEDDIALLKTCIRKLSFLNPSF-SLGPYSTSIKKMEKEIKNM 70
+++ P PPDE+D A T LS L P+F L ST +K + E M
Sbjct: 131 QQQQPAPPDENDSAAPST----LSLLGPTFPGLSSCSTDLKDILSEAGTM 176
>sp|Q746Y3|PCKG_GEOSL Phosphoenolpyruvate carboxykinase [GTP] OS=Geobacter sulfurreducens
(strain ATCC 51573 / DSM 12127 / PCA) GN=pckG PE=3 SV=1
Length = 618
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 13/68 (19%)
Query: 25 NPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKN-------------MA 71
NP+ E + L K C++ + FS+GP + I K+ EI + M
Sbjct: 96 NPKEMKEKLLGLFKGCMKGRTMYVIPFSMGPLGSPIAKIGVEITDSPYVVVNMRIMTRMG 155
Query: 72 KKVNDLCG 79
KKV D+ G
Sbjct: 156 KKVLDILG 163
>sp|D4ACE5|INTU_RAT Protein inturned OS=Rattus norvegicus GN=Intu PE=3 SV=1
Length = 942
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 18 DEIKEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAK 72
D +++++ D D++ALLK +K + NP F LG + + E E+ NM K
Sbjct: 738 DTVRKQRESEGSD-DNVALLKLARKKSTLPNP-FHLGTSKKELSEKELEVYNMMK 790
>sp|O97960|ANDR_PAPHA Androgen receptor OS=Papio hamadryas GN=AR PE=2 SV=1
Length = 895
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 26 PRPPDEDDIALLKTCIRKLSFLNPSF-SLGPYSTSIKKMEKEIKNM 70
P PPDEDD A T LS L P+F L S +K + E M
Sbjct: 133 PAPPDEDDSAAPST----LSLLGPTFPGLSSCSADLKDILSEASTM 174
>sp|O97775|ANDR_PANTR Androgen receptor OS=Pan troglodytes GN=AR PE=1 SV=1
Length = 911
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 26 PRPPDEDDIALLKTCIRKLSFLNPSF-SLGPYSTSIKKMEKEIKNM 70
P PPDEDD A T LS L P+F L S +K + E M
Sbjct: 147 PAPPDEDDSAAPST----LSLLGPTFPGLSSCSADLKDILSEASTM 188
>sp|P10275|ANDR_HUMAN Androgen receptor OS=Homo sapiens GN=AR PE=1 SV=2
Length = 919
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 26 PRPPDEDDIALLKTCIRKLSFLNPSF-SLGPYSTSIKKMEKEIKNM 70
P PPDEDD A T LS L P+F L S +K + E M
Sbjct: 148 PAPPDEDDSAAPST----LSLLGPTFPGLSSCSADLKDILSEASTM 189
>sp|Q6QT55|ANDR_MACMU Androgen receptor OS=Macaca mulatta GN=AR PE=2 SV=1
Length = 895
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 26 PRPPDEDDIALLKTCIRKLSFLNPSF-SLGPYSTSIKKMEKEIKNM 70
P PPDEDD A T LS L P+F L S +K + E M
Sbjct: 133 PAPPDEDDSAAPST----LSLLGPTFPGLSSCSADLKDILSEASTM 174
>sp|Q8I0F4|LIS1_DICDI Lissencephaly-1 homolog OS=Dictyostelium discoideum GN=lis1 PE=1
SV=1
Length = 419
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 21 KEEKNPRPPDEDDIALLKTCIRKLSFLNPSFSL 53
KE+ PRPP++ + + CI + F +PSFSL
Sbjct: 89 KEDALPRPPEKHILTGHRNCINSVKF-HPSFSL 120
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,730,670
Number of Sequences: 539616
Number of extensions: 1734354
Number of successful extensions: 5865
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 5815
Number of HSP's gapped (non-prelim): 57
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)