Query 037077
Match_columns 118
No_of_seqs 114 out of 129
Neff 3.4
Searched_HMMs 13730
Date Mon Mar 25 14:06:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037077.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037077hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ifta1 c.66.1.46 (A:11-193) P 42.7 5.8 0.00042 26.7 2.0 19 44-62 118-136 (183)
2 d1qiba_ d.92.1.11 (A:) Gelatin 41.2 6.6 0.00048 24.6 2.0 19 27-55 143-161 (161)
3 d2j7ya1 a.123.1.1 (A:217-452) 39.4 20 0.0014 24.4 4.5 42 28-73 130-171 (236)
4 d1xc5a1 a.4.1.3 (A:413-480) Nu 35.6 6.3 0.00046 23.0 1.1 13 2-14 29-41 (68)
5 d1dg9a_ c.44.1.1 (A:) Tyrosine 34.9 17 0.0013 23.0 3.4 27 48-75 129-157 (157)
6 d2fhpa1 c.66.1.46 (A:1-182) Pu 34.4 6.1 0.00045 26.8 1.0 18 44-61 116-133 (182)
7 d1hy7a_ d.92.1.11 (A:) Stromel 34.3 11 0.00077 23.8 2.2 18 28-55 151-168 (168)
8 d2fnua1 c.67.1.4 (A:2-372) Spo 33.3 32 0.0023 24.4 5.0 35 28-70 9-43 (371)
9 d2fpoa1 c.66.1.46 (A:10-192) M 32.6 10 0.00073 25.4 1.9 20 43-62 113-132 (183)
10 d1kpga_ c.66.1.18 (A:) CmaA1 { 31.8 7.4 0.00054 28.4 1.2 42 46-87 24-67 (285)
11 d1p8aa_ c.44.1.1 (A:) Tyrosine 30.7 17 0.0012 22.9 2.7 29 46-74 115-143 (146)
12 d1jl3a_ c.44.1.1 (A:) Arsenate 30.4 29 0.0021 21.5 3.9 35 43-77 98-132 (137)
13 d2cu7a1 a.4.1.3 (A:8-72) MYSM1 29.2 6.9 0.0005 22.4 0.5 11 2-12 14-24 (65)
14 d1kpia_ c.66.1.18 (A:) CmaA2 { 26.8 10 0.00074 27.7 1.2 42 46-87 23-66 (291)
15 d1mdoa_ c.67.1.4 (A:) Aminotra 25.1 62 0.0045 22.3 5.2 37 27-71 8-44 (376)
16 d2esra1 c.66.1.46 (A:28-179) P 24.8 9.6 0.0007 24.6 0.6 19 44-62 86-104 (152)
17 d1x41a1 a.4.1.1 (A:8-54) Trans 21.8 12 0.00088 20.5 0.6 12 2-13 13-25 (47)
18 d2fk8a1 c.66.1.18 (A:22-301) M 21.3 15 0.0011 26.4 1.1 42 46-87 14-57 (280)
No 1
>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]}
Probab=42.70 E-value=5.8 Score=26.71 Aligned_cols=19 Identities=26% Similarity=0.527 Sum_probs=14.1
Q ss_pred hccCCCCCCCchhhhHHHH
Q 037077 44 LSFLNPSFSLGPYSTSIKK 62 (118)
Q Consensus 44 ~~~~~~~yg~gpYs~~Ik~ 62 (118)
+-|+||.|+.+.|...++.
T Consensus 118 lIFlDPPY~~~~~~~~l~~ 136 (183)
T d2ifta1 118 VVFLDPPFHFNLAEQAISL 136 (183)
T ss_dssp EEEECCCSSSCHHHHHHHH
T ss_pred EEEechhHhhhhHHHHHHH
Confidence 5699999998877655443
No 2
>d1qiba_ d.92.1.11 (A:) Gelatinase A {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.21 E-value=6.6 Score=24.64 Aligned_cols=19 Identities=21% Similarity=0.342 Sum_probs=16.1
Q ss_pred CCCChhhHHHHHHHHhhhccCCCCCCCch
Q 037077 27 RPPDEDDIALLKTCIRKLSFLNPSFSLGP 55 (118)
Q Consensus 27 ~~lde~dI~lLk~~~~~~~~~~~~yg~gp 55 (118)
..|.++||+-|+.. ||.+|
T Consensus 143 ~~l~~~Di~~i~~L----------YG~~p 161 (161)
T d1qiba_ 143 FRLSQDDIKGIQEL----------YGASP 161 (161)
T ss_dssp CCCCHHHHHHHHHH----------HCCCC
T ss_pred CCCCHHHHHHHHHH----------hCcCC
Confidence 45999999999986 99876
No 3
>d2j7ya1 a.123.1.1 (A:217-452) Estrogen receptor beta {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=39.36 E-value=20 Score=24.41 Aligned_cols=42 Identities=10% Similarity=0.139 Sum_probs=23.5
Q ss_pred CCChhhHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHH
Q 037077 28 PPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMAKK 73 (118)
Q Consensus 28 ~lde~dI~lLk~~~~~~~~~~~~yg~gpYs~~Ik~lE~dIk~~~~~ 73 (118)
-||+.|+++||. +.++||......=...+.+....+....++
T Consensus 130 ~ld~~E~~lLka----IvLf~pd~~~l~~~~~~~~~~~~v~~~~~~ 171 (236)
T d2j7ya1 130 KLQHKEYLCVKA----MILLNSSMYPLASANQEAESSRKLTHLLNA 171 (236)
T ss_dssp TCCHHHHHHHHH----HHHTTTTCCCCC------HHHHHHHHHHHH
T ss_pred CCCHHHHHHHHH----HHHhCCcCCCCcchhHHHHHHHHHHHHHHH
Confidence 389999999997 789999753322223334444444444433
No 4
>d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.63 E-value=6.3 Score=23.04 Aligned_cols=13 Identities=31% Similarity=0.204 Sum_probs=10.9
Q ss_pred hHHHHHhhhhcCC
Q 037077 2 LEAVQQFGKLWQL 14 (118)
Q Consensus 2 ~~~~~~~gk~~~~ 14 (118)
++|++++|++|..
T Consensus 29 ~~~~~~~G~~w~~ 41 (68)
T d1xc5a1 29 REKFMQHPKNFGL 41 (68)
T ss_dssp HHHHHHTTSCSSS
T ss_pred HHHHHHHCCcHHH
Confidence 5789999999954
No 5
>d1dg9a_ c.44.1.1 (A:) Tyrosine phosphatase {Cow (Bos taurus) [TaxId: 9913]}
Probab=34.89 E-value=17 Score=22.99 Aligned_cols=27 Identities=15% Similarity=0.299 Sum_probs=18.5
Q ss_pred CCCCCCc--hhhhHHHHHHHHHHHHHHHHH
Q 037077 48 NPSFSLG--PYSTSIKKMEKEIKNMAKKVN 75 (118)
Q Consensus 48 ~~~yg~g--pYs~~Ik~lE~dIk~~~~~In 75 (118)
|| ||.+ -|..-..+++.-++.+.++|+
T Consensus 129 DP-y~~~~~~f~~~~~~I~~~v~~ll~~lk 157 (157)
T d1dg9a_ 129 DP-YYGNDADFETVYQQCVRCCRAFLEKVR 157 (157)
T ss_dssp CC-TTSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CC-CCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 66 4444 577777788887777776653
No 6
>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}
Probab=34.43 E-value=6.1 Score=26.76 Aligned_cols=18 Identities=17% Similarity=0.479 Sum_probs=13.2
Q ss_pred hccCCCCCCCchhhhHHH
Q 037077 44 LSFLNPSFSLGPYSTSIK 61 (118)
Q Consensus 44 ~~~~~~~yg~gpYs~~Ik 61 (118)
+-|+||.|+.+.|...+.
T Consensus 116 lIflDPPY~~~~~~~~l~ 133 (182)
T d2fhpa1 116 LVLLDPPYAKQEIVSQLE 133 (182)
T ss_dssp EEEECCCGGGCCHHHHHH
T ss_pred eEEechhhhhhHHHHHHH
Confidence 679999998777654433
No 7
>d1hy7a_ d.92.1.11 (A:) Stromelysin-1 (MMP-3) {Human (Homo sapiens), fibroblast [TaxId: 9606]}
Probab=34.26 E-value=11 Score=23.84 Aligned_cols=18 Identities=22% Similarity=0.394 Sum_probs=15.7
Q ss_pred CCChhhHHHHHHHHhhhccCCCCCCCch
Q 037077 28 PPDEDDIALLKTCIRKLSFLNPSFSLGP 55 (118)
Q Consensus 28 ~lde~dI~lLk~~~~~~~~~~~~yg~gp 55 (118)
.|..+||+-|+.. ||.+|
T Consensus 151 ~l~~~Di~~lq~L----------YGanp 168 (168)
T d1hy7a_ 151 RLSQDDINGIQSL----------YGPPP 168 (168)
T ss_dssp CCCHHHHHHHHHH----------HCSCC
T ss_pred CCCHHHHHHHHHH----------hCcCC
Confidence 4899999999986 99876
No 8
>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}
Probab=33.28 E-value=32 Score=24.40 Aligned_cols=35 Identities=11% Similarity=0.158 Sum_probs=23.5
Q ss_pred CCChhhHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHH
Q 037077 28 PPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNM 70 (118)
Q Consensus 28 ~lde~dI~lLk~~~~~~~~~~~~yg~gpYs~~Ik~lE~dIk~~ 70 (118)
.++++|++.+..+++ ...|+.||| +++.|+++.+.
T Consensus 9 ~~~~~~~~~v~~~l~-----~~~~~~G~~---v~~fE~~~~~~ 43 (371)
T d2fnua1 9 CLDKEDKKAVLEVLN-----SKQLTQGKR---SLLFEEALCEF 43 (371)
T ss_dssp CCCHHHHHHHHHHHT-----SSCCSSSHH---HHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHc-----CCCccCCHH---HHHHHHHHHHH
Confidence 489999998888643 345788987 44455544443
No 9
>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}
Probab=32.63 E-value=10 Score=25.41 Aligned_cols=20 Identities=25% Similarity=0.581 Sum_probs=14.4
Q ss_pred hhccCCCCCCCchhhhHHHH
Q 037077 43 KLSFLNPSFSLGPYSTSIKK 62 (118)
Q Consensus 43 ~~~~~~~~yg~gpYs~~Ik~ 62 (118)
.+-|+||.|+.+-|...+..
T Consensus 113 DlIf~DPPY~~~~~~~~l~~ 132 (183)
T d2fpoa1 113 NIVFVDPPFRRGLLEETINL 132 (183)
T ss_dssp EEEEECCSSSTTTHHHHHHH
T ss_pred CEEEEcCccccchHHHHHHH
Confidence 36799999998877654443
No 10
>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=31.78 E-value=7.4 Score=28.44 Aligned_cols=42 Identities=12% Similarity=0.194 Sum_probs=34.3
Q ss_pred cCCCC--CCCchhhhHHHHHHHHHHHHHHHHHHHhCcccccccc
Q 037077 46 FLNPS--FSLGPYSTSIKKMEKEIKNMAKKVNDLCGIELCYKCV 87 (118)
Q Consensus 46 ~~~~~--yg~gpYs~~Ik~lE~dIk~~~~~In~L~GiKEsdTGL 87 (118)
||+|+ |+.|+|...=..+|.--..+.+.+-++.+++.-++-|
T Consensus 24 ~Lg~~~~YS~g~~~~~~~tL~eAQ~~k~~~~~~~l~l~~G~~VL 67 (285)
T d1kpga_ 24 FLDPTQTYSCAYFERDDMTLQEAQIAKIDLALGKLGLQPGMTLL 67 (285)
T ss_dssp TSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTTTCCTTCEEE
T ss_pred hCCCCCcEeeEEeCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 78887 9999998765667777777778888888999988888
No 11
>d1p8aa_ c.44.1.1 (A:) Tyrosine phosphatase {Tritrichomonas foetus [TaxId: 5724]}
Probab=30.66 E-value=17 Score=22.91 Aligned_cols=29 Identities=21% Similarity=0.335 Sum_probs=22.0
Q ss_pred cCCCCCCCchhhhHHHHHHHHHHHHHHHH
Q 037077 46 FLNPSFSLGPYSTSIKKMEKEIKNMAKKV 74 (118)
Q Consensus 46 ~~~~~yg~gpYs~~Ik~lE~dIk~~~~~I 74 (118)
.-||.||.--|..-..+++..|+.+.++.
T Consensus 115 I~DPy~~~~~f~~~~~~I~~~i~~ll~~~ 143 (146)
T d1p8aa_ 115 VDDPYYSSDGFPTMFASISKEMKPFLTEH 143 (146)
T ss_dssp SCCCSSSSSSHHHHHHHHHHTTHHHHHHH
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 45787776668888888888888877654
No 12
>d1jl3a_ c.44.1.1 (A:) Arsenate reductase ArsC {Bacillus subtilis [TaxId: 1423]}
Probab=30.44 E-value=29 Score=21.52 Aligned_cols=35 Identities=9% Similarity=0.250 Sum_probs=22.5
Q ss_pred hhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHH
Q 037077 43 KLSFLNPSFSLGPYSTSIKKMEKEIKNMAKKVNDL 77 (118)
Q Consensus 43 ~~~~~~~~yg~gpYs~~Ik~lE~dIk~~~~~In~L 77 (118)
.+.|-||++..|++.......+.-..++...|.+|
T Consensus 98 ~~~~~DP~~~~~~~~~~~~~f~~v~d~I~~~i~~l 132 (137)
T d1jl3a_ 98 HWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEF 132 (137)
T ss_dssp ECCCCCGGGCCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeccCCCcccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678999988887666555555445555555544
No 13
>d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.16 E-value=6.9 Score=22.41 Aligned_cols=11 Identities=27% Similarity=0.933 Sum_probs=9.7
Q ss_pred hHHHHHhhhhc
Q 037077 2 LEAVQQFGKLW 12 (118)
Q Consensus 2 ~~~~~~~gk~~ 12 (118)
++||+.+|++|
T Consensus 14 ~~~~~~~G~~W 24 (65)
T d2cu7a1 14 EQGLAKFGRRW 24 (65)
T ss_dssp HHHHHHTCSCH
T ss_pred HHHHHHhcchH
Confidence 57899999999
No 14
>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=26.81 E-value=10 Score=27.72 Aligned_cols=42 Identities=19% Similarity=0.212 Sum_probs=34.0
Q ss_pred cCCCC--CCCchhhhHHHHHHHHHHHHHHHHHHHhCcccccccc
Q 037077 46 FLNPS--FSLGPYSTSIKKMEKEIKNMAKKVNDLCGIELCYKCV 87 (118)
Q Consensus 46 ~~~~~--yg~gpYs~~Ik~lE~dIk~~~~~In~L~GiKEsdTGL 87 (118)
||+|+ |+.|+|...=..+|.--..+.+.+-+..+++..++-|
T Consensus 23 ~Lg~~~~YS~~~~~~~~~tL~~Aq~~k~~~~~~~l~l~~G~~VL 66 (291)
T d1kpia_ 23 WLDPSMTYSCAYFERPDMTLEEAQYAKRKLALDKLNLEPGMTLL 66 (291)
T ss_dssp HSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHHTTCCCTTCEEE
T ss_pred hcCCCCCeeeEEecCCCCCHHHHHHHHHHHHHHhcCCCCCCEEE
Confidence 77776 8999998765667777777888888888999988887
No 15
>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}
Probab=25.13 E-value=62 Score=22.27 Aligned_cols=37 Identities=16% Similarity=0.410 Sum_probs=24.1
Q ss_pred CCCChhhHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHH
Q 037077 27 RPPDEDDIALLKTCIRKLSFLNPSFSLGPYSTSIKKMEKEIKNMA 71 (118)
Q Consensus 27 ~~lde~dI~lLk~~~~~~~~~~~~yg~gpYs~~Ik~lE~dIk~~~ 71 (118)
+.|+++|+..+..+++. .+ |..|||. +++|+.+.+..
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~----~~~G~~v---~~~E~~la~~~ 44 (376)
T d1mdoa_ 8 PAMGAEELAAVKTVLDS-GW----ITTGPKN---QELEAAFCRLT 44 (376)
T ss_dssp CCCCHHHHHHHHHHHHH-TC----CSSSHHH---HHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhc-CC----CcCCHHH---HHHHHHHHHHH
Confidence 35899999988877654 23 4568875 45665554443
No 16
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}
Probab=24.82 E-value=9.6 Score=24.62 Aligned_cols=19 Identities=26% Similarity=0.576 Sum_probs=13.4
Q ss_pred hccCCCCCCCchhhhHHHH
Q 037077 44 LSFLNPSFSLGPYSTSIKK 62 (118)
Q Consensus 44 ~~~~~~~yg~gpYs~~Ik~ 62 (118)
+-|+||.|+.+.|...+..
T Consensus 86 iIf~DPPy~~~~~~~~l~~ 104 (152)
T d2esra1 86 LVFLDPPYAKETIVATIEA 104 (152)
T ss_dssp EEEECCSSHHHHHHHHHHH
T ss_pred eeEechhhccchHHHHHHH
Confidence 5689999877666665543
No 17
>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.81 E-value=12 Score=20.55 Aligned_cols=12 Identities=58% Similarity=0.825 Sum_probs=9.4
Q ss_pred hHHHHHhhh-hcC
Q 037077 2 LEAVQQFGK-LWQ 13 (118)
Q Consensus 2 ~~~~~~~gk-~~~ 13 (118)
++||+.+|. +|.
T Consensus 13 ~~~v~~~G~~nW~ 25 (47)
T d1x41a1 13 LEAVMDCGFGNWQ 25 (47)
T ss_dssp HHHHHHTCTTCHH
T ss_pred HHHHHHHCCccHH
Confidence 579999994 783
No 18
>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.31 E-value=15 Score=26.41 Aligned_cols=42 Identities=12% Similarity=0.139 Sum_probs=29.1
Q ss_pred cCCC--CCCCchhhhHHHHHHHHHHHHHHHHHHHhCcccccccc
Q 037077 46 FLNP--SFSLGPYSTSIKKMEKEIKNMAKKVNDLCGIELCYKCV 87 (118)
Q Consensus 46 ~~~~--~yg~gpYs~~Ik~lE~dIk~~~~~In~L~GiKEsdTGL 87 (118)
||+| .|+.|+|...=..+|.--..+.+.+-+..+++..++-|
T Consensus 14 ~ld~~m~YS~~~~~~~~~tL~~AQ~~k~~~~~~~l~l~~g~~VL 57 (280)
T d2fk8a1 14 FQDPTRTYSCAYFEPPELTLEEAQYAKVDLNLDKLDLKPGMTLL 57 (280)
T ss_dssp TSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTSCCCTTCEEE
T ss_pred hCCCCCcEeeEEeCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 5666 48889998754455554445666677777888888877
Done!