BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037079
(201 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana
GN=UBP12 PE=1 SV=2
Length = 1116
Score = 88.2 bits (217), Expect = 4e-17, Method: Composition-based stats.
Identities = 48/129 (37%), Positives = 73/129 (56%), Gaps = 7/129 (5%)
Query: 70 KHVWKIENFSKLEAKRHESEVFIVRDQKWKIQLHPKGIKSGTGSHVSMSLALVDSSTITP 129
K W I NFS+ ++H S+VF+V KW+I + PKG H+SM L + D++++
Sbjct: 56 KFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKG---NNVDHLSMYLDVSDAASLPY 112
Query: 130 GFKIYVHFTLRIRDQVRGKH---KEANTSIWFRSS-WGWPRFAELSYLNEAGNGFLVNDG 185
G+ Y F+L + +Q+ ++ KE R S WG+ F LS L + G+LVND
Sbjct: 113 GWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDT 172
Query: 186 CIVEAEVSV 194
+VEAEV+V
Sbjct: 173 VLVEAEVAV 181
Score = 47.8 bits (112), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 5 RRRFHGLKLEWGFDQFIPLEEFNDASNGYLVDDTCVFGAEVLVKE 49
+ +F+ + +WGF F+PL E D S GYLV+DT + AEV V++
Sbjct: 139 QHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVRK 183
>sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana
GN=UBP13 PE=1 SV=1
Length = 1115
Score = 87.0 bits (214), Expect = 7e-17, Method: Composition-based stats.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 70 KHVWKIENFSKLEAKRHESEVFIVRDQKWKIQLHPKGIKSGTGSHVSMSLALVDSSTITP 129
K W I F++L ++H S+VF+V KW+I + PKG H+SM L + D++ +
Sbjct: 55 KFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKG---NNVDHLSMYLDVADAANLPY 111
Query: 130 GFKIYVHFTLRIRDQVRGKH---KEANTSIWFRSS-WGWPRFAELSYLNEAGNGFLVNDG 185
G+ Y F+L + +QV ++ KE R S WG+ F LS L E G+LVND
Sbjct: 112 GWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDT 171
Query: 186 CIVEAEVSV 194
++EAEV+V
Sbjct: 172 VLIEAEVAV 180
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 5 RRRFHGLKLEWGFDQFIPLEEFNDASNGYLVDDTCVFGAEVLVKE 49
+ +F+ + +WGF F+PL E + + GYLV+DT + AEV V++
Sbjct: 138 QHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVAVRK 182
>sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana
GN=At5g43560 PE=1 SV=1
Length = 1055
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 70 KHVWKIENFSKLEAKRHESEVFIVRDQKWKIQLHPKGIKSGTGSHVSMSLALVDSSTITP 129
K+ W IE FS + + +VF V KW I ++P+G +H+S+ L + + P
Sbjct: 70 KNTWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGCD--VCNHLSLFLCVAHHEKLLP 127
Query: 130 GFKIYVHFTLRI--RDQVRGKHKEANTSIWFRS-SWGWPRFAELSYLNEAGNGFLVNDGC 186
G+ + FT+ + +D + KH + W + WGW +F EL L E GF+ + GC
Sbjct: 128 GWSHFAQFTIAVSNKDPKKSKHSDTLHRFWKKEHDWGWKKFIELPKLKE---GFIDDSGC 184
Query: 187 I-VEAEVSVL 195
+ ++A+V V+
Sbjct: 185 LTIKAQVQVI 194
>sp|Q54NN4|Y8514_DICDI TNF receptor-associated factor family protein DDB_G0285149
OS=Dictyostelium discoideum GN=DDB_G0285149 PE=3 SV=1
Length = 427
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 14/155 (9%)
Query: 50 RNKCKGECLSMTKLTSASIYKHVWKIENFSK----------LEAKRHESEVFIVRDQKWK 99
R KC E L +LT+ + Y + W IEN+ + KR +F +K+
Sbjct: 267 RLKCSHETLE-KRLTNINKYSNQWVIENWMQKVIDIPNDEVTSTKRVSCPMFYFNSRKYN 325
Query: 100 IQLHPKGIKSGTGSHVSMSLALVDSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWFR 159
+ P G ++S+ L L ++S P I F + D + KE N+
Sbjct: 326 VSCFPNGFTPANKDYISLYLHLHEAS---PNINIKFSFEIVNSDPTKSIKKEKNSYFQND 382
Query: 160 SSWGWPRFAELSYLNEAGNGFLVNDGCIVEAEVSV 194
GW +FAE +N G GF+V + ++ E+ +
Sbjct: 383 KGIGWEKFAECKTINTLGEGFVVGNKLTIKFEIEI 417
>sp|Q8T126|FNKC_DICDI Probable inactive serine/threonine-protein kinase fnkC
OS=Dictyostelium discoideum GN=fnkC PE=3 SV=1
Length = 1304
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 36/190 (18%)
Query: 16 GFDQFIPLEEFNDASNGYLVDDTCVFGAEVLVKERNKCKGECLSMTKLTSASIYKHVWKI 75
G+ FI L + +NG+LV++T K + + + L + ++
Sbjct: 1125 GYGSFIGLFSLLNPNNGFLVNNTI------------KVRIDAAPTSPLVNTYDKYNIGLN 1172
Query: 76 ENFS---KLEAKRHE---SEVFIVRDQKWKIQLHPKGIKSGTGSHVSMSLALVDSSTITP 129
+ FS + +K+ E S +F+ +KW I+++P G S +++S+ L D
Sbjct: 1173 QAFSYSVPMMSKKSEPFISPIFMSCGRKWIIKIYPMGQPSS--NYMSVFLEYRDEGEEN- 1229
Query: 130 GFKIYVHFTLRIRDQVRGKHKEANTSIWFR-------SSWGWPRFAELSYLNEAGNGFLV 182
VHF+L + Q+ + E + W + +S+G+P+F +S L + GFLV
Sbjct: 1230 -----VHFSLELISQL---YPEQSIKYWVQYRFNSKSNSFGYPKFIGVSTLMDPDMGFLV 1281
Query: 183 NDGCIVEAEV 192
ND I+ +
Sbjct: 1282 NDTIILNVSI 1291
>sp|Q86AY4|Y2340_DICDI TNF receptor-associated factor family protein DDB_G0272340
OS=Dictyostelium discoideum GN=DDB_G0272340 PE=3 SV=2
Length = 449
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 69 YKHVWKIENFS-KLE----AKRHESEVFIVRDQKWKIQLHPK-GIKSGTGSHVSMSLALV 122
Y++ W I N+S KL+ K ES F+V + K+KIQ +P G+ + +S+ L
Sbjct: 312 YQNKWVITNWSQKLQDYPKPKSIESPEFMVGNLKFKIQFYPNGGLSDESKDFLSIYLYKF 371
Query: 123 DSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWF-RSSWGWPRFAELSYLNEAGNGFL 181
D T + K+ F L +D R + K A+T+I+ + WGW F S + GF+
Sbjct: 372 DDQTPS---KVQFSFELLNKDFTRNR-KLASTNIFHTENKWGWRSFINNSLVT-TQTGFV 426
Query: 182 VNDGCIVEAEVSVLGISK 199
+ + + + +L K
Sbjct: 427 IQNSVTLNINIEILPEEK 444
>sp|P34568|BAT43_CAEEL BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans
GN=bath-43 PE=3 SV=2
Length = 451
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 14/138 (10%)
Query: 69 YKHVWKIENFSKLEAKRHE---SEVFIV--RDQ-KWKIQLHPKGIKSGTGSHVSMSLALV 122
+ ++W I NFS + E S F D+ KW ++++PKG+ + ++S+ L LV
Sbjct: 96 FNYMWTINNFSFCREEMGEVLKSSTFSAGCNDKLKWCLRINPKGLDEESRDYLSLYLLLV 155
Query: 123 DSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWFR----SSWGWPRFAELSYLNEAGN 178
+ ++ F I + R + K + +R WG+ +F +L + N
Sbjct: 156 QCNKS----EVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN 211
Query: 179 GFLVNDGCIVEAEVSVLG 196
G L D + EVSV+
Sbjct: 212 GLLPGDRLSIFCEVSVVA 229
>sp|Q54FG0|Y0883_DICDI TNF receptor-associated factor family protein DDB_G0290883
OS=Dictyostelium discoideum GN=DDB_G0290883 PE=3 SV=1
Length = 460
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 69 YKHVWKIENFS-----KLEAKRHESEVFIVRDQKWKIQLHPKGIKSGTGSHVSMSLALVD 123
Y++ W I N+S KL K S + ++ +++ ++PKG ++S+ L V+
Sbjct: 321 YRNKWIISNYSSLAKSKLNCKSLSSPILLILSHHFQVCVYPKG--DENKEYISLYLR-VN 377
Query: 124 SSTITPGFKIYVHFTL-RIRDQVRGKHKEANTSIWFRS-SWGWPRFAELSYLNEAGNGFL 181
+ K+ FTL + D+ + K + ++ WGW +F LS L NG+L
Sbjct: 378 NIEEPNSLKVEYSFTLVNVLDKSKSITKRVDKIVFISPKEWGWGKFL-LSDLINKENGWL 436
Query: 182 VND 184
ND
Sbjct: 437 SND 439
>sp|P11467|DG17_DICDI RING finger protein DG17 OS=Dictyostelium discoideum GN=zfaA PE=2
SV=2
Length = 460
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 69 YKHVWKIENFS-----KLEAKRHESEVFIVRDQKWKIQLHPKGIKSGTGSHVSMSLALVD 123
Y++ W I N+S KL + S + + +++ ++PKG ++S+ L V+
Sbjct: 321 YRNKWIISNYSSVAKSKLNCQALSSPMLSILSHLFQVCVYPKG--DENKEYISLYLR-VN 377
Query: 124 SSTITPGFKIYVHFTL-RIRDQVRGKHKEANTSIWFRSS-WGWPRFAELSYLNEAGNGFL 181
+ K+ FTL + D+ + K+ + ++ S WGW +F LS L NG+L
Sbjct: 378 NIEEPNSLKVEYSFTLVNVLDKSKSITKKEDKKVFISSEGWGWGKFL-LSDLINKENGWL 436
Query: 182 VNDG-CIVEAEVSVLG 196
ND I+E + +L
Sbjct: 437 SNDDKLIIEIYIKILN 452
>sp|Q54C11|Y3202_DICDI TNF receptor-associated factor family protein DDB_G0293202
OS=Dictyostelium discoideum GN=DDB_G0293202 PE=2 SV=1
Length = 437
Score = 37.4 bits (85), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 69 YKHVWKIENFSKLEAKR---HESEVFIVRDQKWKIQLHPKGIKSGTGSHVSMSLALVDSS 125
+K VW I+NFSK + ++ S V V + + L+P G S + S+SL LV
Sbjct: 304 FKSVWDIKNFSKRQFQKGFYFSSPVITVGHHSFHLWLYPNGETSPSN---SLSLYLV--- 357
Query: 126 TITPGFKIYVHFTLRIRD 143
+T G K +V+F++ I++
Sbjct: 358 -LTKGEKTFVNFSISIKN 374
>sp|Q2M2N2|SPOPL_MOUSE Speckle-type POZ protein-like OS=Mus musculus GN=Spopl PE=2 SV=3
Length = 392
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 14/140 (10%)
Query: 69 YKHVWKIENFSKLEAKRHE---SEVFIV---RDQKWKIQLHPKGIKSGTGSHVSMSLALV 122
+ ++W I NFS + E S F KW ++++PKG+ + ++S+ L
Sbjct: 32 FSYMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLL-- 89
Query: 123 DSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWFR----SSWGWPRFAELSYLNEAGN 178
P ++ F + + R + K + +R WG+ +F +L + N
Sbjct: 90 --LVSCPKSEVRAKFKFSLLNDKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN 147
Query: 179 GFLVNDGCIVEAEVSVLGIS 198
G L +D + EVSV+ S
Sbjct: 148 GLLPDDKLTLFCEVSVVQDS 167
>sp|Q6IQ16|SPOPL_HUMAN Speckle-type POZ protein-like OS=Homo sapiens GN=SPOPL PE=2 SV=1
Length = 392
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 14/140 (10%)
Query: 69 YKHVWKIENFSKLEAKRHE---SEVF---IVRDQKWKIQLHPKGIKSGTGSHVSMSLALV 122
+ ++W I NFS + E S F KW ++++PKG+ + ++S+ L
Sbjct: 32 FSYMWTINNFSFCREEMGEVLKSSTFSSGPSDKMKWCLRVNPKGLDDESKDYLSLYLL-- 89
Query: 123 DSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWFR----SSWGWPRFAELSYLNEAGN 178
P ++ F + + R + K + +R WG+ +F +L + N
Sbjct: 90 --LVSCPKSEVRAKFKFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN 147
Query: 179 GFLVNDGCIVEAEVSVLGIS 198
G L +D + EVSV+ S
Sbjct: 148 GLLPDDKLTLFCEVSVVQDS 167
>sp|A0JMG1|SPOLB_DANRE Speckle-type POZ protein-like B OS=Danio rerio GN=spoplb PE=2 SV=2
Length = 392
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 22/144 (15%)
Query: 69 YKHVWKIENFSKLEAKRHESEVFIVRD----------QKWKIQLHPKGIKSGTGSHVSMS 118
+ ++W I NFS + E +VR KW ++++PKG+ + ++S+
Sbjct: 32 FSYMWTINNFSFCREEMGE----VVRSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLY 87
Query: 119 LALVDSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWFR----SSWGWPRFAELSYLN 174
L P ++ F + + R + K + +R WG+ +F +L
Sbjct: 88 LL----LVSCPKSEVRAKFKFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLL 143
Query: 175 EAGNGFLVNDGCIVEAEVSVLGIS 198
+ NG L +D + EVSV+ S
Sbjct: 144 DEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q86KX6|Y2348_DICDI TNF receptor-associated factor family protein DDB_G0272348
OS=Dictyostelium discoideum GN=DDB_G0272348 PE=3 SV=2
Length = 595
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 18/137 (13%)
Query: 67 SIYKHVWKIENFSKLEAK-----RHESEVFIVRDQKWKIQLHPKGIKSGTGSHVSMSLAL 121
++YK+ W I N+S+ E + +S +F + + + ++ P G K + +
Sbjct: 455 AVYKNKWVISNYSEQEQQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLNYCSIFLYKTQ 514
Query: 122 VDSSTITPGFKIYVHF-TLRIRDQV---RG--KHKEANTSIWFRSSWGWPRFAELSYLNE 175
D S I Y+H +I D+V RG K+ N S + +G +F + + L
Sbjct: 515 DDKSIIV---NYYIHLVNNQISDEVYEKRGCQKYDSENGS----AGYGSSQFIKRADLLN 567
Query: 176 AGNGFLVNDGCIVEAEV 192
NGFL+ND +E E+
Sbjct: 568 DANGFLINDSITIEIEI 584
>sp|Q5BL35|SPOLA_DANRE Speckle-type POZ protein-like A OS=Danio rerio GN=spopla PE=2 SV=1
Length = 392
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 14/140 (10%)
Query: 69 YKHVWKIENFSKLEAKRHE---SEVFIV---RDQKWKIQLHPKGIKSGTGSHVSMSLALV 122
+ ++W I NFS + E S F KW ++++PKG+ + ++S+ L
Sbjct: 32 FSYMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLL-- 89
Query: 123 DSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWFR----SSWGWPRFAELSYLNEAGN 178
P ++ F + + R + K + +R WG+ +F +L + N
Sbjct: 90 --LVSCPKSEVRAKFKFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN 147
Query: 179 GFLVNDGCIVEAEVSVLGIS 198
G L +D + EVSV+ S
Sbjct: 148 GLLPDDKLTLFCEVSVVQDS 167
>sp|Q9UTT1|UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ubp21 PE=3 SV=2
Length = 1129
Score = 35.0 bits (79), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 62/163 (38%), Gaps = 31/163 (19%)
Query: 63 LTSASIYKHVWKIENFSKLEAKRHESEVFIVRDQKWKIQLHPKGIKSGTGSHVSM----- 117
L A+ + W ++NFS LE K + S +F W+I L PKG + V +
Sbjct: 46 LEEAAHASYSWVVKNFSTLEDKTY-SPLFKAGHTTWRIVLFPKGCNQTEYASVFLEYLPQ 104
Query: 118 -----------SLALVDSSTITP------GFKIYVHFTLRIRDQVRGKHKEANTSIW-FR 159
LA + TI P + F L + + + NTS FR
Sbjct: 105 CKVEAIRKYEAELAAGKTPTIDPEIVNDETYSCCAQFALSLSNVQDPTVMQINTSHHRFR 164
Query: 160 S---SWGWPRFAELSYL----NEAGNGFLVNDGCIVEAEVSVL 195
S WG+ RF +L + E FL ND + V VL
Sbjct: 165 SEVKDWGFTRFVDLRKIAVPTPEFPVPFLENDEICISVTVRVL 207
>sp|Q717B2|TDPZ2_MOUSE TD and POZ domain-containing protein 2 OS=Mus musculus GN=Tdpoz2
PE=2 SV=2
Length = 364
Score = 34.7 bits (78), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 73 WKIENFSKLEA---KRHESEVF-IVRDQK--WKIQLHPKGIKSGTGSHVSMSLALVDSST 126
W I NFS ++ +S VF +V +++ W +++HP G + ++S+ L LV+
Sbjct: 24 WTISNFSFCMGGIRRKIKSPVFSLVANEEVAWCLRVHPNGFDEESKDYLSVYLVLVN--- 80
Query: 127 ITPGFKIYVHFTLRIRDQVRGKHKEANT----SIWFRSSWGWPRFAELSYLNEAGNGFLV 182
P ++ F I++ K++ + S + +WG+ +F L N L
Sbjct: 81 -CPKRQVRAKFEFWIKNSQGEKYQYTQSLNVPSFQRKQNWGFSKFILRDSLLSHRNWLLP 139
Query: 183 NDGCIVEAEVSVLG 196
D + +VS++G
Sbjct: 140 KDKLTLCCKVSIVG 153
>sp|O22286|BPM3_ARATH BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis
thaliana GN=BPM3 PE=1 SV=1
Length = 408
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 71 HVWKIENFSKLEA----KRHESEVFIVRDQKWKIQLHPKGIKS-GTGSHVSMSLALVDSS 125
H + I+ +S + K +S++F V W I +P G S++S+ +AL S
Sbjct: 27 HQFTIQGYSLAKGMSPGKFIQSDIFSVGGYDWAIYFYPDGKNPEDQSSYISLFIALASDS 86
Query: 126 TITPGFKIYVHFTLRIRDQV-RGKHKEAN-----------TSIWFRSSWGWPRFAELSYL 173
I F L + DQ +GKHK + T + S WG+ RF + S L
Sbjct: 87 N-----DIRALFELTLMDQSGKGKHKVHSHFDRALEGGPYTLKYKGSMWGYKRFFKRSAL 141
Query: 174 NEAGNGFLVNDGCIVEAEVSVL 195
+ +L +D ++ V V+
Sbjct: 142 ETS--DYLKDDCLVINCTVGVV 161
>sp|Q5NVK7|SPOP_PONAB Speckle-type POZ protein OS=Pongo abelii GN=SPOP PE=1 SV=1
Length = 374
Score = 33.9 bits (76), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 69 YKHVWKIENFSKLEAKRHE---SEVFI--VRDQ-KWKIQLHPKGIKSGTGSHVSMSLALV 122
+ ++W I NFS + E S F D+ KW ++++PKG+ + ++S+ L
Sbjct: 32 FSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYL--- 88
Query: 123 DSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWFR----SSWGWPRFAELSYLNEAGN 178
P ++ F I + + K + +R WG+ +F +L + N
Sbjct: 89 -LLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN 147
Query: 179 GFLVNDGCIVEAEVSVLGIS 198
G L +D + EVSV+ S
Sbjct: 148 GLLPDDKLTLFCEVSVVQDS 167
>sp|Q6ZWS8|SPOP_MOUSE Speckle-type POZ protein OS=Mus musculus GN=Spop PE=1 SV=1
Length = 374
Score = 33.9 bits (76), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 69 YKHVWKIENFSKLEAKRHE---SEVFI--VRDQ-KWKIQLHPKGIKSGTGSHVSMSLALV 122
+ ++W I NFS + E S F D+ KW ++++PKG+ + ++S+ L
Sbjct: 32 FSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYL--- 88
Query: 123 DSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWFR----SSWGWPRFAELSYLNEAGN 178
P ++ F I + + K + +R WG+ +F +L + N
Sbjct: 89 -LLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN 147
Query: 179 GFLVNDGCIVEAEVSVLGIS 198
G L +D + EVSV+ S
Sbjct: 148 GLLPDDKLTLFCEVSVVQDS 167
>sp|O43791|SPOP_HUMAN Speckle-type POZ protein OS=Homo sapiens GN=SPOP PE=1 SV=1
Length = 374
Score = 33.9 bits (76), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 69 YKHVWKIENFSKLEAKRHE---SEVFI--VRDQ-KWKIQLHPKGIKSGTGSHVSMSLALV 122
+ ++W I NFS + E S F D+ KW ++++PKG+ + ++S+ L
Sbjct: 32 FSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYL--- 88
Query: 123 DSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWFR----SSWGWPRFAELSYLNEAGN 178
P ++ F I + + K + +R WG+ +F +L + N
Sbjct: 89 -LLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN 147
Query: 179 GFLVNDGCIVEAEVSVLGIS 198
G L +D + EVSV+ S
Sbjct: 148 GLLPDDKLTLFCEVSVVQDS 167
>sp|Q0VCW1|SPOP_BOVIN Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=2 SV=1
Length = 374
Score = 33.9 bits (76), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 69 YKHVWKIENFSKLEAKRHE---SEVFI--VRDQ-KWKIQLHPKGIKSGTGSHVSMSLALV 122
+ ++W I NFS + E S F D+ KW ++++PKG+ + ++S+ L
Sbjct: 32 FSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYL--- 88
Query: 123 DSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWFR----SSWGWPRFAELSYLNEAGN 178
P ++ F I + + K + +R WG+ +F +L + N
Sbjct: 89 -LLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN 147
Query: 179 GFLVNDGCIVEAEVSVLGIS 198
G L +D + EVSV+ S
Sbjct: 148 GLLPDDKLTLFCEVSVVQDS 167
>sp|Q0IHH9|SPOPB_XENLA Speckle-type POZ protein B OS=Xenopus laevis GN=spop-b PE=2 SV=1
Length = 374
Score = 33.5 bits (75), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 69 YKHVWKIENFSKLEAKRHE---SEVFI--VRDQ-KWKIQLHPKGIKSGTGSHVSMSLALV 122
+ ++W I NFS + E S F D+ KW ++++PKG+ + ++S+ L
Sbjct: 32 FSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL-- 89
Query: 123 DSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWFR----SSWGWPRFAELSYLNEAGN 178
P ++ F I + + K + +R WG+ +F +L + N
Sbjct: 90 --LVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN 147
Query: 179 GFLVNDGCIVEAEVSVLGIS 198
G L +D + EVSV+ S
Sbjct: 148 GLLPDDKLTLFCEVSVVQDS 167
>sp|Q6P8B3|SPOP_XENTR Speckle-type POZ protein OS=Xenopus tropicalis GN=spop PE=2 SV=1
Length = 374
Score = 33.5 bits (75), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Query: 69 YKHVWKIENFSKLEAKRHE---SEVFI--VRDQ-KWKIQLHPKGIKSGTGSHVSMSLALV 122
+ ++W I NFS + E S F D+ KW ++++PKG+ + ++S+ L
Sbjct: 32 FSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL-- 89
Query: 123 DSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWFR----SSWGWPRFAELSYLNEAGN 178
P ++ F I + + K + +R WG+ +F +L + N
Sbjct: 90 --LVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN 147
Query: 179 GFLVNDGCIVEAEVSVL 195
G L +D + EVSV+
Sbjct: 148 GLLPDDKLTLFCEVSVV 164
>sp|Q7ZX06|SPOPA_XENLA Speckle-type POZ protein A OS=Xenopus laevis GN=spop-a PE=2 SV=1
Length = 374
Score = 33.5 bits (75), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Query: 69 YKHVWKIENFSKLEAKRHE---SEVFI--VRDQ-KWKIQLHPKGIKSGTGSHVSMSLALV 122
+ ++W I NFS + E S F D+ KW ++++PKG+ + ++S+ L
Sbjct: 32 FSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLL-- 89
Query: 123 DSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWFR----SSWGWPRFAELSYLNEAGN 178
P ++ F I + + K + +R WG+ +F +L + N
Sbjct: 90 --LVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN 147
Query: 179 GFLVNDGCIVEAEVSVL 195
G L +D + EVSV+
Sbjct: 148 GLLPDDKLTLFCEVSVV 164
>sp|Q9VFP2|RDX_DROME Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2
Length = 829
Score = 33.5 bits (75), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 69 YKHVWKIENFSKLEAKRHE---SEVFIV--RDQ-KWKIQLHPKGI--KSGTGSHVSMSLA 120
+ ++W I NFS + E S F D+ KW ++++PKG+ +S + + L
Sbjct: 487 FSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLV 546
Query: 121 LVDSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWFRS--SWGWPRFAELSYLNEAGN 178
+ S + FK F++ + K E+ + F WG+ +F +L + N
Sbjct: 547 SCNKSEVRAKFK----FSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN 602
Query: 179 GFLVNDGCIVEAEVSVLGIS 198
G L D + EVSV+ S
Sbjct: 603 GLLPEDKLTIFCEVSVVADS 622
>sp|Q7T330|SPOP_DANRE Speckle-type POZ protein OS=Danio rerio GN=spop PE=2 SV=1
Length = 374
Score = 33.5 bits (75), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 69 YKHVWKIENFSKLEAKRHE---SEVFI--VRDQ-KWKIQLHPKGIKSGTGSHVSMSLALV 122
+ ++W I NFS + E S F D+ KW ++++PKG+ + ++S+ L
Sbjct: 32 FSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYL--- 88
Query: 123 DSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWFR----SSWGWPRFAELSYLNEAGN 178
P ++ F I + + K + +R WG+ +F +L + N
Sbjct: 89 -LLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEAN 147
Query: 179 GFLVNDGCIVEAEVSVLGIS 198
G L +D + EVSV+ S
Sbjct: 148 GLLPDDKLTLFCEVSVVQDS 167
>sp|Q60MK8|UBP7_CAEBR Ubiquitin carboxyl-terminal hydrolase 7 OS=Caenorhabditis briggsae
GN=usp-7 PE=3 SV=1
Length = 1129
Score = 33.5 bits (75), Expect = 1.1, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 8 FHGLKLEWGFDQFIPLEEFNDASNGYLVDDT----CVFGAEV 45
FH +++WGF + + +GY++DD C F A+V
Sbjct: 132 FHNTEVDWGFSNYDQYDTLTSPKDGYVIDDVIRLRCRFTADV 173
>sp|Q7M6Y6|HTRB2_MOUSE HEAT repeat-containing protein 7B2 OS=Mus musculus GN=Heatr7b2 PE=1
SV=2
Length = 1581
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 46 LVKERNKCKGECLSMTKLTSASIYKHV--WKIENFSKLEAKRHESEVFIVRD---QKWKI 100
LV++ N + C+++ S SIYK+V WK + KL+A R ++F++ +KW
Sbjct: 137 LVEDENMRQTFCIALENF-SKSIYKYVNHWKDFPYPKLDANRLSDKIFMLFRYIMEKWAP 195
Query: 101 Q---LHPKGIKSGTGSHVSMSL 119
Q +H I G VS+ L
Sbjct: 196 QASPMHALAIIKAHGPTVSLLL 217
>sp|Q7JKC3|UBP7_CAEEL Ubiquitin carboxyl-terminal hydrolase 7 OS=Caenorhabditis elegans
GN=usp-7 PE=2 SV=1
Length = 1135
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 8 FHGLKLEWGFDQFIPLEEFNDASNGYLVDDT----CVFGAEV 45
FH +++WGF + + + +GY+V+DT C F A+V
Sbjct: 135 FHNTEVDWGFSNYDQYDTLCNPKDGYVVNDTIKLRCRFTADV 176
>sp|Q1ZXR0|Y8444_DICDI TNF receptor-associated factor family protein DDB_G0268444
OS=Dictyostelium discoideum GN=DDB_G0268444 PE=2 SV=1
Length = 502
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 69 YKHVWKIENFSKLEAKRHE---SEVFIVRDQKWKIQLHPKGIKSGTGSHVSMSLALVDSS 125
YK+ W I N+ E++++ S F + D+K+K+ ++P+G GS+ S+ L S
Sbjct: 369 YKNRWSISNYL-TESRKYRKITSPSFKIYDKKFKLVIYPQG--KDDGSYTSLFLK---SD 422
Query: 126 TITPGFKIYVHFTLRIRDQVRG 147
+I P Y L +D+ +
Sbjct: 423 SINPIKVFYKFVLLNFKDESKN 444
>sp|Q6GR09|SPOPL_XENLA Speckle-type POZ protein-like OS=Xenopus laevis GN=spopl PE=2 SV=1
Length = 392
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 69 YKHVWKIENFSKLEAKRHE---SEVFI--VRDQ-KWKIQLHPKGIKSGTGSHVSMSLALV 122
+ ++W I NFS + E S F D+ KW ++++PKG+ + ++S+ L
Sbjct: 32 FSYMWTINNFSFCREETGEVLKSSSFSSGPNDKLKWCLRVNPKGLDDESKDYLSLYLL-- 89
Query: 123 DSSTITPGFKIYVHFTLRIRDQVRGKHKEANTSIWFR----SSWGWPRFAELSYLNEAGN 178
P ++ F + + + K + +R WG+ ++ +L + N
Sbjct: 90 --LVSCPKNEVRAKFKFSLLNSKNEETKAMESQRAYRFVQGKDWGFKKYIRRDFLLDEAN 147
Query: 179 GFLVNDGCIVEAEVSVLGIS 198
G L +D + EVSV+ S
Sbjct: 148 GLLPDDKLTLYCEVSVVQDS 167
>sp|P65374|MMPLB_MYCTU Putative membrane protein mmpL11 OS=Mycobacterium tuberculosis
GN=mmpL11 PE=3 SV=1
Length = 966
Score = 31.2 bits (69), Expect = 4.5, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 110 GTGSHVSMSLALVDSSTITPG-FKIYVHFTLRIRDQVRGKHKEANTSIWFRSSW-GW 164
TG+ +++++A++ S+T+TP + + V + A+T WF S W GW
Sbjct: 308 ATGAILAVAVAMLTSATLTPAVLATFARAAAKRSALVHWSRRPASTQSWFWSRWVGW 364
>sp|P65375|MMPLB_MYCBO Putative membrane protein mmpL11 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=mmpL11 PE=3 SV=1
Length = 966
Score = 31.2 bits (69), Expect = 4.5, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 110 GTGSHVSMSLALVDSSTITPG-FKIYVHFTLRIRDQVRGKHKEANTSIWFRSSW-GW 164
TG+ +++++A++ S+T+TP + + V + A+T WF S W GW
Sbjct: 308 ATGAILAVAVAMLTSATLTPAVLATFARAAAKRSALVHWSRRPASTQSWFWSRWVGW 364
>sp|P69977|YSCL_YERPS Yop proteins translocation protein L OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=yscL PE=2 SV=1
Length = 221
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 15/58 (25%)
Query: 141 IRDQVRGKHKEANTSIWFRSSWGWPRFAELSYLNEAGNGFLVNDGCIVEAEVSVLGIS 198
IR+Q+ HK+ F E+SYL + L GCI+E EV ++ S
Sbjct: 156 IREQIAKVHKD---------------FPEISYLEVTADARLDQGGCILETEVGIIDAS 198
>sp|P69976|YSCL_YERPE Yop proteins translocation protein L OS=Yersinia pestis GN=yscL
PE=3 SV=1
Length = 221
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 15/58 (25%)
Query: 141 IRDQVRGKHKEANTSIWFRSSWGWPRFAELSYLNEAGNGFLVNDGCIVEAEVSVLGIS 198
IR+Q+ HK+ F E+SYL + L GCI+E EV ++ S
Sbjct: 156 IREQIAKVHKD---------------FPEISYLEVTADARLDQGGCILETEVGIIDAS 198
>sp|Q01253|YSCL_YEREN Yop proteins translocation protein L OS=Yersinia enterocolitica
GN=yscL PE=2 SV=1
Length = 223
Score = 31.2 bits (69), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 15/58 (25%)
Query: 141 IRDQVRGKHKEANTSIWFRSSWGWPRFAELSYLNEAGNGFLVNDGCIVEAEVSVLGIS 198
IR+Q+ HK+ F E+SYL + L GCI+E EV ++ S
Sbjct: 156 IREQIAKVHKD---------------FPEISYLEVTADARLDQGGCILETEVGIIDAS 198
>sp|Q94420|MEL26_CAEEL Protein maternal effect lethal 26 OS=Caenorhabditis elegans
GN=mel-26 PE=1 SV=2
Length = 395
Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 70 KHVWKIENFSKLEAKRHESEVFIVRDQK---WKIQLHPKGIKSGTGSHVSMSLALVDSST 126
+H W ++NFS + E+ V++ R + W I+++PKG V + L V ++
Sbjct: 43 QHTWTVKNFSHCYQEYLENFVYLQRGDEQLTWSIKIYPKGNGENNKDFVFLCLNRVINNN 102
Query: 127 ITPG 130
+ G
Sbjct: 103 VKAG 106
>sp|Q5QZS6|SYI_IDILO Isoleucine--tRNA ligase OS=Idiomarina loihiensis (strain ATCC
BAA-735 / DSM 15497 / L2-TR) GN=ileS PE=3 SV=1
Length = 944
Score = 30.8 bits (68), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 13/102 (12%)
Query: 16 GFDQFI-----PLEEFND-ASNGYLVDDTCVFGAEVLVKERNKCKGECLSMTKLTSASIY 69
G D F+ +E +N NG DDT +F + + K + + L A Y
Sbjct: 348 GVDDFLVGQKYGIEVYNPVGDNGVYKDDTPLFAGQHVFKANEPIVDKLREVGNLMHAESY 407
Query: 70 KHVWKIENFSKLEAKRHESEVFIVRDQKWKIQLHPKGIKSGT 111
+H S RH++ + +W I + KG+++G
Sbjct: 408 RH-------SYPHCWRHKTPIIFRATPQWFISMDKKGLRAGA 442
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 30.8 bits (68), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 90 VFIVRDQKWKIQLHPKGIKSGTGSHVSMSLALVDSSTITPGFKIYVHFTLRIRDQVRGKH 149
+ D+K +Q H +KSG G S+S ALV + +H ++ D++ K
Sbjct: 159 ALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKD 218
Query: 150 KEANTSI 156
+ + T++
Sbjct: 219 ERSWTTM 225
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,106,009
Number of Sequences: 539616
Number of extensions: 2891566
Number of successful extensions: 6222
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 6177
Number of HSP's gapped (non-prelim): 62
length of query: 201
length of database: 191,569,459
effective HSP length: 112
effective length of query: 89
effective length of database: 131,132,467
effective search space: 11670789563
effective search space used: 11670789563
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)