BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037081
(75 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49884|RL30_LUPLU 60S ribosomal protein L30 OS=Lupinus luteus GN=RPL30 PE=3 SV=1
Length = 112
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 49/55 (89%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
KKTHESINNRLALVMKSGKYTLGYK ++SLR + LII+++NCPPLRKSEIEY
Sbjct: 8 KKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEY 62
>sp|Q9M5M6|RL30_EUPES 60S ribosomal protein L30 OS=Euphorbia esula GN=RPL30 PE=3 SV=1
Length = 112
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 48/55 (87%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
KKTHESIN+RLALVMKSGK+TLGYK + SLR N LII+++NCPPLRKSEIEY
Sbjct: 8 KKTHESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEIEY 62
>sp|Q9LSA3|RL303_ARATH 60S ribosomal protein L30-3 OS=Arabidopsis thaliana GN=RPL30C
PE=3 SV=1
Length = 112
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 49/55 (89%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
KK+HE IN+RLALVMKSGKYTLGYK+ ++SLR + LI++SSNCPPLR+SEIEY
Sbjct: 8 KKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEY 62
>sp|Q9C8F7|RL301_ARATH Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana
GN=RPL30A PE=3 SV=1
Length = 112
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 49/55 (89%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
KK+HE IN+RLALVMKSGKYTLGYK+ ++SLR + LI++SSNCPPLR+SEIEY
Sbjct: 8 KKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEY 62
>sp|Q8VZ19|RL302_ARATH 60S ribosomal protein L30-2 OS=Arabidopsis thaliana GN=RPL30B
PE=3 SV=1
Length = 112
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 49/55 (89%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
KK+HE IN+RLALVMKSGKYTLGYK+ ++SLR + LI++S+NCPPLR+SEIEY
Sbjct: 8 KKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEY 62
>sp|Q9SDG6|RL30_ORYSJ 60S ribosomal protein L30 OS=Oryza sativa subsp. japonica
GN=RPL30 PE=3 SV=1
Length = 111
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 47/55 (85%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
KK+ ++INN+L LVMKSGKYTLGYK +R+LR + L+I+S+NCPPLRKSEIEY
Sbjct: 8 KKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEIEY 62
>sp|O48558|RL30_MAIZE 60S ribosomal protein L30 OS=Zea mays GN=RPL30 PE=3 SV=1
Length = 112
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 47/55 (85%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
KK+ ++INN+L LVMKSGKYTLGYK +R+LR + L+I+++NCPPLRKSEIEY
Sbjct: 8 KKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEIEY 62
>sp|P58375|RL30_SPOFR 60S ribosomal protein L30 OS=Spodoptera frugiperda GN=RpL30 PE=3
SV=1
Length = 113
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 46/56 (82%), Gaps = 3/56 (5%)
Query: 23 EKKTHESINNRLALVMKSGKYTLGYKAAIRSLRR---NLIILSSNCPPLRKSEIEY 75
+KKT ESIN+RLALVMKSGKY LGYK +++LR+ L+I++ N PPLRKSEIEY
Sbjct: 7 QKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEY 62
>sp|Q5I7K9|RL30_WHEAT 60S ribosomal protein L30 OS=Triticum aestivum PE=1 SV=2
Length = 112
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 46/54 (85%), Gaps = 3/54 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIE 74
KK+ E+INN+L LVMKSGKYTLGYK +++LR + LIIL++NCPPLRKSEIE
Sbjct: 8 KKSGENINNKLQLVMKSGKYTLGYKTVLKTLRSSLGKLIILANNCPPLRKSEIE 61
>sp|Q6FXZ0|RL30_CANGA 60S ribosomal protein L30 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPL30
PE=3 SV=1
Length = 105
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%), Gaps = 3/54 (5%)
Query: 25 KTHESINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
KT ESIN +LALV+KSGK+TLGYK+ I+SLR+ LII+++N P LRKSE+EY
Sbjct: 5 KTQESINQKLALVVKSGKFTLGYKSTIKSLRQGKSKLIIIAANTPVLRKSELEY 58
>sp|P14120|RL30_YEAST 60S ribosomal protein L30 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL30 PE=1 SV=3
Length = 105
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%), Gaps = 3/54 (5%)
Query: 25 KTHESINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
K+ ESIN +LALV+KSGKYTLGYK+ ++SLR+ LII+++N P LRKSE+EY
Sbjct: 5 KSQESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEY 58
>sp|P52808|RL30A_SCHPO 60S ribosomal protein L30-1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl30a PE=3 SV=2
Length = 109
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 44/56 (78%), Gaps = 3/56 (5%)
Query: 23 EKKTHESINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
KK+ ++IN +LAL MKSGKY LGYK+ +++LR LI+++ NCPPLRKSE+EY
Sbjct: 9 SKKSGDTINAKLALTMKSGKYVLGYKSTLKTLRSGKAKLILIAGNCPPLRKSELEY 64
>sp|P67884|RL30_OPHHA 60S ribosomal protein L30 OS=Ophiophagus hannah GN=RPL30 PE=3
SV=2
Length = 115
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 44/55 (80%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRR---NLIILSSNCPPLRKSEIEY 75
KK+ ESIN+RL LVMKSGKY LGYK ++ +R+ L+IL++NCP LRKSEIEY
Sbjct: 8 KKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEY 62
>sp|P67883|RL30_CHICK 60S ribosomal protein L30 OS=Gallus gallus GN=RPL30 PE=3 SV=2
Length = 115
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 44/55 (80%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRR---NLIILSSNCPPLRKSEIEY 75
KK+ ESIN+RL LVMKSGKY LGYK ++ +R+ L+IL++NCP LRKSEIEY
Sbjct: 8 KKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEY 62
>sp|P62890|RL30_RAT 60S ribosomal protein L30 OS=Rattus norvegicus GN=Rpl30 PE=3 SV=2
Length = 115
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 44/55 (80%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRR---NLIILSSNCPPLRKSEIEY 75
KK+ ESIN+RL LVMKSGKY LGYK ++ +R+ L+IL++NCP LRKSEIEY
Sbjct: 8 KKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEY 62
>sp|P62889|RL30_MOUSE 60S ribosomal protein L30 OS=Mus musculus GN=Rpl30 PE=2 SV=2
Length = 115
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 44/55 (80%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRR---NLIILSSNCPPLRKSEIEY 75
KK+ ESIN+RL LVMKSGKY LGYK ++ +R+ L+IL++NCP LRKSEIEY
Sbjct: 8 KKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEY 62
>sp|Q76KA2|RL30_MACFA 60S ribosomal protein L30 OS=Macaca fascicularis GN=RPL30 PE=3
SV=3
Length = 115
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 44/55 (80%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRR---NLIILSSNCPPLRKSEIEY 75
KK+ ESIN+RL LVMKSGKY LGYK ++ +R+ L+IL++NCP LRKSEIEY
Sbjct: 8 KKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEY 62
>sp|P62888|RL30_HUMAN 60S ribosomal protein L30 OS=Homo sapiens GN=RPL30 PE=1 SV=2
Length = 115
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 44/55 (80%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRR---NLIILSSNCPPLRKSEIEY 75
KK+ ESIN+RL LVMKSGKY LGYK ++ +R+ L+IL++NCP LRKSEIEY
Sbjct: 8 KKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEY 62
>sp|Q3T0D5|RL30_BOVIN 60S ribosomal protein L30 OS=Bos taurus GN=RPL30 PE=3 SV=3
Length = 115
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 44/55 (80%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRR---NLIILSSNCPPLRKSEIEY 75
KK+ ESIN+RL LVMKSGKY LGYK ++ +R+ L+IL++NCP LRKSEIEY
Sbjct: 8 KKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEY 62
>sp|Q752U5|RL30_ASHGO 60S ribosomal protein L30 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL30 PE=3
SV=3
Length = 105
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%), Gaps = 3/54 (5%)
Query: 25 KTHESINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
K E+IN +LALV+KSGKYTLGYK+ I+SLR+ LII+++N P LRKSE+EY
Sbjct: 5 KNQENINQKLALVIKSGKYTLGYKSTIKSLRQGKAKLIIIAANTPVLRKSELEY 58
>sp|P58372|RL30_ICTPU 60S ribosomal protein L30 OS=Ictalurus punctatus GN=rpl30 PE=3
SV=2
Length = 116
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 43/55 (78%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAA---IRSLRRNLIILSSNCPPLRKSEIEY 75
KK+ ESIN+RL LVMKSGKY LGYK + IR + L+IL++NCP LRKSEIEY
Sbjct: 8 KKSLESINSRLQLVMKSGKYVLGYKQSQKMIRQGKAKLVILANNCPALRKSEIEY 62
>sp|P38664|RL30_KLULA 60S ribosomal protein L30 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=RPL30 PE=3 SV=2
Length = 105
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 44/54 (81%), Gaps = 3/54 (5%)
Query: 25 KTHESINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
K E+IN +LALV+KSGKY+LGYK+ ++SLR+ LII+++N P LRKSE+EY
Sbjct: 5 KNQENINQKLALVVKSGKYSLGYKSTVKSLRQGKAKLIIIAANTPVLRKSELEY 58
>sp|Q9UTP0|RL30B_SCHPO 60S ribosomal protein L30-2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl30b PE=3 SV=1
Length = 117
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 45/55 (81%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
KK+ ++IN++LAL MKSGKY LGYK+ +++LR LI++++N PPLRKSE+EY
Sbjct: 18 KKSGDTINSKLALTMKSGKYVLGYKSTLKTLRSGKAKLILIAANAPPLRKSELEY 72
>sp|P0DJ59|RL30_TETTS 60S ribosomal protein L30 OS=Tetrahymena thermophila (strain
SB210) GN=RPL30 PE=1 SV=1
Length = 104
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 46/58 (79%), Gaps = 3/58 (5%)
Query: 21 VLEKKTHESINNRLALVMKSGKYTLGYKAAIRSLRR---NLIILSSNCPPLRKSEIEY 75
+++K T ++I ++LALVM+SGK TLGYK+ I+++R L+ +S+NCP +RKSEIEY
Sbjct: 1 MVKKVTQDNIQSKLALVMRSGKATLGYKSTIKAIRNGTAKLVFISNNCPTVRKSEIEY 58
>sp|P58374|RL30_BRABE 60S ribosomal protein L30 OS=Branchiostoma belcheri GN=RPL30 PE=3
SV=1
Length = 114
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 3/56 (5%)
Query: 23 EKKTHESINNRLALVMKSGKYTLGYKAAIRSLRR---NLIILSSNCPPLRKSEIEY 75
++KT ESIN+RL LVMKSGKY LG K ++ LR+ LII+++N P LRKSEIEY
Sbjct: 4 KRKTMESINSRLQLVMKSGKYVLGLKETLKVLRQGKAKLIIIANNTPALRKSEIEY 59
>sp|Q6C4U7|RL30_YARLI 60S ribosomal protein L30 OS=Yarrowia lipolytica (strain CLIB 122
/ E 150) GN=RPL30 PE=3 SV=1
Length = 109
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 43/55 (78%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
KK+ +++N +L L +KSGKYTLGYK+ I++LR+ L+I++ N P LRKSEIEY
Sbjct: 7 KKSGDNVNAKLGLAIKSGKYTLGYKSTIKALRQGKAKLVIIAGNTPALRKSEIEY 61
>sp|P49153|RL30_TRYBB 60S ribosomal protein L30 OS=Trypanosoma brucei brucei GN=RPL30
PE=3 SV=1
Length = 105
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 42/51 (82%), Gaps = 3/51 (5%)
Query: 28 ESINNRLALVMKSGKYTLGYKAAIRSLRR---NLIILSSNCPPLRKSEIEY 75
++IN ++ LVMKSGKY LG + ++++LR+ L+++S+NCPP+RK+EIEY
Sbjct: 10 DTINTKIQLVMKSGKYVLGTQQSLKTLRQGRSKLVVISANCPPIRKAEIEY 60
>sp|Q55BS9|RL30_DICDI 60S ribosomal protein L30 OS=Dictyostelium discoideum GN=rpl30
PE=3 SV=1
Length = 112
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 43/55 (78%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLR---RNLIILSSNCPPLRKSEIEY 75
KK+ E+I ++LALVMKSGK LGYK+ +++LR LI+L+SN P +R+SEIEY
Sbjct: 8 KKSQENIGSKLALVMKSGKSQLGYKSTLKTLRAGKSKLILLASNLPSIRRSEIEY 62
>sp|Q7S7F1|RL30_NEUCR 60S ribosomal protein L30 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rpl-30 PE=3 SV=1
Length = 109
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 41/55 (74%), Gaps = 3/55 (5%)
Query: 24 KKTHESINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
K +SI +LALV+KSGK LGY++ +++LR LI++S+N PPLRKSE+EY
Sbjct: 7 KSDAQSIGAKLALVIKSGKVVLGYRSTLKALRSGKAKLILISANTPPLRKSELEY 61
>sp|P39095|RL30_LEIMA 60S ribosomal protein L30 OS=Leishmania major GN=RPL30 PE=3 SV=1
Length = 104
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%), Gaps = 6/60 (10%)
Query: 22 LEKKTHE---SINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
+ KKT +IN +L LVMKSGKY LG + A+ +LR+ L+++++NCPP+R++E+EY
Sbjct: 1 MAKKTKSKVNTINAKLQLVMKSGKYVLGTQQALTTLRQGRSKLVVIANNCPPIRRAEVEY 60
>sp|O28389|RL30E_ARCFU 50S ribosomal protein L30e OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl30e PE=3 SV=1
Length = 86
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 37 VMKSGKYTLGYKAAIRSLRRN---LIILSSNCP 66
V+K+G Y LG K+ ++SLR +I++SNCP
Sbjct: 11 VLKTGGYRLGSKSTLKSLRNGEAKAVIVASNCP 43
>sp|Q9YAU3|RL30E_AERPE 50S ribosomal protein L30e OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=rpl30e PE=3 SV=2
Length = 100
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 29 SINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
S+ L ++K+G Y +G+K ++++++ I+++ N PP + ++EY
Sbjct: 2 SVEKALKDLVKTGVYAMGFKQSLKAVKAGEAKAIVIAENTPPELRRKLEY 51
>sp|A1RSE6|RL30E_PYRIL 50S ribosomal protein L30e OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=rpl30e PE=3 SV=1
Length = 101
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 29 SINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
I+ L + + +GK +G+K +++ + L+IL++N P K ++EY
Sbjct: 3 DISRELQVAISTGKVVMGFKEVKKTILTSTPKLVILAANAPKWAKEDVEY 52
>sp|A8MB78|RL30E_CALMQ 50S ribosomal protein L30e OS=Caldivirga maquilingensis (strain
ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167)
GN=rpl30e PE=3 SV=1
Length = 103
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 29 SINNRLALVMKSGKYTLGYKAAIRSL---RRNLIILSSNCPPLRKSEIE 74
I+ L +V +G+ T+G + +I+++ L+I+++N PP + ++E
Sbjct: 3 DISRELQVVANTGRLTMGVRQSIKAILNGDAKLVIMAANVPPSIRQDVE 51
>sp|Q7XWS7|FH12_ORYSJ Formin-like protein 12 OS=Oryza sativa subsp. japonica GN=FH12 PE=3
SV=3
Length = 1669
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 43 YTLGYKAAIRSLRRNLIILSSNCPPLRKSE 72
+ + +++ IR +R+NL+ +SS C LR SE
Sbjct: 1417 FKIQFQSQIRDVRKNLLTVSSACEELRGSE 1446
>sp|Q8ZYQ6|RL30E_PYRAE 50S ribosomal protein L30e OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl30e PE=3 SV=1
Length = 102
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 29 SINNRLALVMKSGKYTLGY---KAAIRSLRRNLIILSSNCPPLRKSEIEY 75
I+ L + + +GK +G+ K A+ + LIIL++N P + +IEY
Sbjct: 3 DISRELQVAINTGKVVIGFEETKKALLTGAPKLIILAANAPKWARDDIEY 52
>sp|O27127|RL30E_METTH 50S ribosomal protein L30e OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl30e PE=3 SV=1
Length = 98
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 29 SINNRLALVMKSGKYTLGYKAAIRSLRRN---LIILSSNCPPLRKSEIEY 75
I+ + + + +G LG K I+SL+ L++++SN P K +IEY
Sbjct: 2 DIDRGIRVAVDTGNVILGSKRTIQSLKLGKGKLVVMASNIPEDLKEDIEY 51
>sp|B1YC27|RL30E_PYRNV 50S ribosomal protein L30e OS=Pyrobaculum neutrophilum (strain
DSM 2338 / JCM 9278 / V24Sta) GN=rpl30e PE=3 SV=1
Length = 101
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 29 SINNRLALVMKSGKYTLGY---KAAIRSLRRNLIILSSNCPPLRKSEIEY 75
I+ L + + +GK +G+ K A+ + L+IL++N P + +IEY
Sbjct: 3 DISRELQVALNTGKVIIGFEETKKAVLAGTPKLVILAANAPKWARGDIEY 52
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,135,947
Number of Sequences: 539616
Number of extensions: 727747
Number of successful extensions: 1713
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1650
Number of HSP's gapped (non-prelim): 40
length of query: 75
length of database: 191,569,459
effective HSP length: 46
effective length of query: 29
effective length of database: 166,747,123
effective search space: 4835666567
effective search space used: 4835666567
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)